LOCUS       DANMCL010000001        77355 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.001, whole genome shotgun sequence.
ACCESSION   DANMCL010000001 DANMCL010000000
VERSION     DANMCL010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 77355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 77355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..77355
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.001"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(184..855)
                     /locus_tag="PXF40_000001"
     CDS             complement(184..855)
                     /locus_tag="PXF40_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HDL5801389.1"
                     /translation="MKKSTLAIILGGALLTGTAVAHQAGDVIFRAGAVHVKANSSSDA
                     KSKAATGIDVDLEVKNNTQLGLTATYMLADNVGIELLGATPFSHKINAKAKVLESGAE
                     VDLDRVVILKQLPPSLYAQYYFFELTAKVKPYVGAGLNYTRFYHAKSVSPAVTDLSVK
                     KHSFGPVANLGVDVKLTDNIYFNAAAWYTRIKTTAKFKAAGADHEVKVKLDPVVLFAG
                     FGVKF"
     gene            1110..3677
                     /gene="clpB"
                     /locus_tag="PXF40_000002"
     CDS             1110..3677
                     /gene="clpB"
                     /locus_tag="PXF40_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HDL5801390.1"
                     /translation="MNFEKMTTKLQEALAESQSLAVGKDNPYIEPAHLLYALLKQEGG
                     SIASLFTTLNVDVPTLIRELQQILDRLPKVQGGNTQVSQQLVRLLNQSDKLAQQFGDS
                     FISSELFVLAALDDNGDLGKLFKQFGLNKEKLTQAISQIRGGDTVNNQNAEDTRQALK
                     KYTIDLTERAKAGKLDPVIGRDEEIRRAVQVLQRRTKNNPVLIGEPGVGKTAIVEGLA
                     QRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNDLAKEEGQVILFID
                     EIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKV
                     LVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYVSDRQLPDKAIDLI
                     DEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQRLAKLDEEMAAKE
                     REYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMSELQYGVIPNLE
                     KQLQAVENGEKNADAQLLRTKVTEEEIAEVLSKATGIPVAKMMEGEKEKLLRMEEVLH
                     ARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELSKTLANFLFDD
                     PDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPYSVVLLDEVEKAH
                     PDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYKGYDVVKEMVM
                     EVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYEVTVTDAAL
                     DHIGKAGFDPLFGARPLKRAIQQELENPLAQQILSGKLLPNKAVTVDYQNGQIVATQ"
     gene            3891..5033
                     /locus_tag="PXF40_000003"
     CDS             3891..5033
                     /locus_tag="PXF40_000003"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HDL5801391.1"
                     /translation="MSQLFPEATIRTQAPYRNDIVGSFLRTDALKKAREDFNQQKITR
                     DELREVTRQEVKKLVELQKQHGVKAVSDGEFSRTWWHLDFLAELDGMDWQETEVFNVN
                     FTGHKPKGQTVKIVGDIDFSESHPFVDAYRLLKEAAGDYPTKFTIPAPTMLHIICCVR
                     AEDYQPLPQYQDEQKLYDDIANAYIKAMHKFYDMGLRNLQLDDTSWGQFCAEDKRKEF
                     AARGFNLTDLAEKYVALLNRIVDAKPADMSITMHICRGNFRSSWFSEGGYGPVAEVLF
                     GKCRVDGFFLEYDTERAGTFEPLRHIKDQQVVLGLITSKFGDLEDKNVIIERIKEAAQ
                     IVPINQLCLSPQCGFASTEEGNILTEAAQWAKLNLIKEIAEEVWGS"
     gene            complement(5090..6481)
                     /locus_tag="PXF40_000004"
     CDS             complement(5090..6481)
                     /locus_tag="PXF40_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HDL5801392.1"
                     /translation="MENTPLIEPSKNTRNSLIFVADAILFIILLNTLPFTPEANKGLA
                     LLIFIAVLWLTEALHVTVTALLIPILAVALGLVKSKEALVAFADPTIFLFFGGFALAT
                     ALHIQQLDRMIANKIMALAKGKLSIAVIYLFAVTAFLSMWMSNTATAAMMLPLAMGIL
                     SKLDQKQNHNTYLFVLLGIAYSASIGGMGTLVGSPPNAIVASQLNLTFADWLKYGLPI
                     MLILFPLMIATLYIVFKPNFSVSFDRSFEKIELNRSRIITLAIFVFIALGWIFGDKIN
                     PIISAFLGINGKIASFDTILALIAAALICITRVANWQQIQENTEWGVLFLFGGGLTLS
                     AVLGQTGASKIMADGVVSLIEGGHFYLIGLIVAAFIIFLTEVTSNTASAALLVPIFIS
                     IAQALNMPPVGLALIIGLGASCAFMLPVATPPNAIVFGTGQIKQSEMIKVGFWLNIIS
                     IFVIATVGYLFWL"
     gene            complement(6641..7540)
                     /gene="cdd"
                     /locus_tag="PXF40_000005"
     CDS             complement(6641..7540)
                     /gene="cdd"
                     /locus_tag="PXF40_000005"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HDL5801393.1"
                     /translation="MFRTDITERFEQLKAAKNCEVTQAIIEQLIKQDFHGQLSYEVVD
                     ELCEKFKRSRVELALYCIAIAACYAVTPVSDFNVGAVAIGKNGDFYFGANQEFSGECM
                     QQSVHAEQSAISHAFLAGETLITDVVVNYTPCGHCRQFMNELNSAASLKVHLPHSQNN
                     LLHSYLPDSFGPKDLGIEKVLFDEQPQQFEVKGDHLQQAAIFAANNAYAPYSNAFSGV
                     ALQVGERIVCGKYTENAAFNPTFLPLQSALNYRLFLGLADIPVTRVVLAEAKGSLSSY
                     AMTQALAKSLFGLEIEYLSLQAV"
     gene            complement(7554..8456)
                     /locus_tag="PXF40_000006"
     CDS             complement(7554..8456)
                     /locus_tag="PXF40_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5801394.1"
                     /translation="MISSSLKLGYFSLIVATLFWGGNFVLGKVLSGAVQPITLTYLRW
                     LPAFLILVLLFFRPTWRVMHLLKPRLGVMWVLGLLGVILFPATLYEGLKTTTALNASL
                     YLAISPVLVLFLNRLVFKEKISPIILSGAIISLLGVLWLLMQGKLTRLFSLAINQGDL
                     WAIASTISWAVYCCVIRLRPQGISNTVFLTVLVGLAVLTLTPFFIYEYVAESAKNLAN
                     LTALQWSGIGYLVIGPSILSYAFWNFGIAIVGSAKGAVMTNFTPLFAAMFSIILLNES
                     VHTYHIISAILITAGILICSYKKH"
     gene            complement(8453..8809)
                     /gene="folB"
                     /locus_tag="PXF40_000007"
     CDS             complement(8453..8809)
                     /gene="folB"
                     /locus_tag="PXF40_000007"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HDL5801395.1"
                     /translation="MSDKVFIRELTAFASIGAYNWEHTIKQRLVFNIDMAWDFSKAAE
                     TDDVQYCLNYAEVSQKVLDFVESQPFKLVETVAYQLAELLQKEYQLSWIRIELHKPKA
                     VAQASSVGVIVERGHQ"
     gene            8879..9484
                     /gene="plsY"
                     /locus_tag="PXF40_000008"
     CDS             8879..9484
                     /gene="plsY"
                     /locus_tag="PXF40_000008"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HDL5801396.1"
                     /translation="MNLIPYLLILTAYLLGSISSAVIFCKLAGLPDPREVGSHNAGAT
                     NVLRIGGKSAALGVLLFDILKGTLPVAMGIYFELSPSQLGFIALAVCLGHIFPIFFQF
                     RGGKGVATAFGAISALSFIVAGGAIGTWLLVFLISGYSSLSAVFTALVVPFYIWWFEP
                     QFTFPVALVCCLLVYRHHDNIQRLWRGQEDKLWDKFKKNRA"
     gene            complement(9558..11465)
                     /gene="parE"
                     /locus_tag="PXF40_000009"
     CDS             complement(9558..11465)
                     /gene="parE"
                     /locus_tag="PXF40_000009"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HDL5801397.1"
                     /translation="MSEKRYGADEITVLKDLEPVQLRPGMYTDTTRPNHLGQEVIDNS
                     VDEALSGFADKIDVILHADNSLEVVDNGRGMPVDIHSTEKISGVELILTKLHAGGKFS
                     NKNYTFSGGLHGVGISVVNALSERVEIQIKRGGEVYSIAFANGVKVEDLTVIGTCPKK
                     QTGTTVRFYPNPKYFDSPRFSVSRLRHLLRAKAVLCPKLTINFIDKINNTEESWYYED
                     GLSDYLSEALNGYETVPNPPFIGDVTAETEAVSWALTWLPEGGELVAESYVNLIPTAQ
                     GGTHVNGLRNGLLKAMVEFCEIHNLLPKGVKLTADDVWNRCAYVLSLKIQEPQFAGQT
                     KERLSSRQASSYVDSTLKDAFSLWLNQNVQTGKLIAEMAISSAQSRMRAAKKVVRKKL
                     VSGPALPGKLADCTAQDLSRTELFLVEGDSAGGSAKQARDKEYQAILPLRGKILNTWE
                     VSSDQVLASQEVHDIAVALGIDPDSDNLEELRYGKVCILADADSDGLHIATLLCALFL
                     RHFPKLVQNGHVYVAMPPLYRIDIGKDEVHYALDEAEKEAILARLAKKKGKPNVQRFK
                     GLGEMNPSQLRETTMEPSTRRLVQLTFDDTVEEGELNTFEIMDMLLGKKRAEDRKQWL
                     QNRGDEADLAV"
     gene            11673..11897
                     /locus_tag="PXF40_000010"
     CDS             11673..11897
                     /locus_tag="PXF40_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5801398.1"
                     /translation="MVVKILKRKSQKTLQQIYTQPISANIKWTNIEALFLELGAEIEE
                     REGSRIAVVLFQQVRVFHRPHPNPDTDKGR"
     gene            11940..12269
                     /locus_tag="PXF40_000011"
     CDS             11940..12269
                     /locus_tag="PXF40_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5801399.1"
                     /translation="MRNIMDINGYKAVIAYDPETELFRGEFIGLNGGADFYADNVIQL
                     KKEGELSLNIFLELCREKGIEPFKQYSGKFNVRLSPELHKAAVIAATAENLSLNEWIN
                     QTLEKSV"
     gene            complement(12308..12694)
                     /gene="cueR"
                     /locus_tag="PXF40_000012"
     CDS             complement(12308..12694)
                     /gene="cueR"
                     /locus_tag="PXF40_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(I)-responsive transcriptional regulator"
                     /protein_id="HDL5801400.1"
                     /translation="MNISQAAEKTGLSAKQIRDYEKAGLLPPTSRTEAGYRFYNATDL
                     SRLHFISNARKVGFSLAQISELLKLNDNPNRSSRDVKQLTEQHIGELEQKIADLNQML
                     TLLKSWSSSCCGNANSECSILNGLNG"
     gene            12783..12983
                     /locus_tag="PXF40_000013"
     CDS             12783..12983
                     /locus_tag="PXF40_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5801401.1"
                     /translation="MTITLQLDGLHCGNCVKSVEKALNGVAGVNQVSVTLEPQIAVVE
                     GSAEAQALIEAVEDIGFDAKLA"
     gene            13036..15228
                     /locus_tag="PXF40_000014"
     CDS             13036..15228
                     /locus_tag="PXF40_000014"
                     /EC_number="3.6.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HDL5801402.1"
                     /translation="MTSTAHYSPEQQLLIDGMHCAACVRRVEKALLKVEKVEFASVNL
                     ADQTAFVQGNANPEALVAAVVKIGFGAEVLESEEERRIKQQAQTQRVLGHKRTQFMLA
                     LVVGFALVAFGFYKGMTVNETNRSLWLSWAGISLATMYFSGKDFFLGAFSALKNRSAN
                     MDMLVAISTGTAWLYSCWLTLFPQPNAHVYFEASVMILGFINLGKYLELKAKQRSSLA
                     LEKLLDLAPKQAVIFEENIAKTIPAKAIKPQMRVQALTGDRLAVDGILDSGSIWVDES
                     MLTGEALPVEKKIGDKVRAGTLVQDGSGTYIAEQVGSQTALARVINAVRHAQSSKPPL
                     AQFVDKIAAVFVPVVVSIALLSALIWLAVGQDFAFALSIFTTVLIIACPCALGLAIPL
                     STIAGVARSAEFGVLVRNIEALQASSEIDTLVFDKTGTLTTGRMEVSDVLTFNGFEQK
                     RLLQLAKSVEQHASHPIAKAIAKFAENQTACGVTDVQVLKGLGISAKYEGSTIRMGNW
                     QFVGETIQANLASLLPAKEGDFSSKIFVSVDNQLAGVLSVSDQLRPEAKATIHQFQAE
                     GYQCVMLTGDRQQTADYFANALGLDGVIAEVLPEQKAEKIRALQAEGKKVAMIGDGIN
                     DAPALAQANVGIAMHNGSDIAVETADLSLMREGLAPLMQILPFSKKVLKNMKQSLLGA
                     FIYNVIAIPIAAGVLYPFTGWLLNPMIAAIAMTLSSITVVLNSQRLLK"
     gene            complement(15281..16066)
                     /gene="truA"
                     /locus_tag="PXF40_000015"
     CDS             complement(15281..16066)
                     /gene="truA"
                     /locus_tag="PXF40_000015"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HDL5801403.1"
                     /translation="MKIALGIEYDGSRYFGWQRQEAVESVQQQLEQALSVVANSPVEV
                     FCAGRTDAGVHGTGQVVHFETQANRPLQSWCFGTNAHLPDDIAVKWAVAVNEDFHARF
                     SATARRYRYIIFNQKLRSAILPKGVTHFHFPLDERKMHQAGQYLLGENDFSSFRAAKC
                     QSNTPWRNIHHLNVSRQGNYVIVDIQANAFVHHMVRNIVGTLLEIGQGRQPVEWAKWV
                     LEQRDREKAAPTAKAEGLYLVEVHYPEHFGIPKTPLGPLFLAD"
     gene            complement(16131..16820)
                     /gene="folE"
                     /locus_tag="PXF40_000016"
     CDS             complement(16131..16820)
                     /gene="folE"
                     /locus_tag="PXF40_000016"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HDL5801404.1"
                     /translation="MTTISPELTITENTLSPEAQKVRQALLAKGIETPTVTHTKDKAS
                     RRAEIQQHMQAVLELLGLDLSDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENR
                     MKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQV
                     QERFTEQILTAFQTILETDDVAVYVKATHFCVKCRGIKDTNSYTVTSAFGGVFLEDRE
                     TRKEFLGLLNK"
     gene            16921..17628
                     /locus_tag="PXF40_000017"
     CDS             16921..17628
                     /locus_tag="PXF40_000017"
                     /EC_number="2.7.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid kinase"
                     /protein_id="HDL5801405.1"
                     /translation="MQNIQYLFNADLIPEHQAEFVQSLLTCKNFDNSDRLLGFSKGRG
                     TTWFLDTSAELGINVVLRHYYRGGLFGKIIKDSYFFTRFEATRAYKEFFLLQQMLAWG
                     LPVPRPVAIKIERHFCCYRADIMLEKLENTQDLSKILQSHSLSNEQYEQIGKLIRSLH
                     NHQIHHSDLNIHNILLGNDGKFCLIDFDKCGIEPGENWKQNNLDRLLRSFKKEQGRLN
                     IFFSEENWQAVLRGYTL"
     gene            complement(17683..18780)
                     /gene="apbC"
                     /locus_tag="PXF40_000018"
     CDS             complement(17683..18780)
                     /gene="apbC"
                     /locus_tag="PXF40_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HDL5801406.1"
                     /translation="MNQLNEQQLVEIKAILQQFSHPTLQKDLIALNAFKKAELGGDIL
                     RIEITMPFAWNSGFETLKAETEAKLKQVTGSSGVKWVLNYQIATLKRANKHPAVNGVK
                     NIIAVTSGKGGVGKSTTSVNLALALRAQGTRVGILDADIYGPSIPHMLGAKDQRPTSP
                     DNKHITPITAHGLQSNSIGYLMEEDNATIWRGPMASSALSQLLNETWWNELDYLVIDM
                     PPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAIKGISMFEKVSVPVLGVIENMSMH
                     ICSNCGHHEAIFGTGGAEKIAQKYGTKVLAQLPLHIRLREDLDSGVPTVVAAPEHEIS
                     QAYLALAEKVASELYWQGSVIPSEIMIREVK"
     gene            complement(18777..20324)
                     /locus_tag="PXF40_000019"
     CDS             complement(18777..20324)
                     /locus_tag="PXF40_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5801407.1"
                     /translation="MLKSLQAVTFVKKIAKVTACILLITSCDQLICPQSIQSVWVENR
                     QSDTLLKRAIYSAVFQLDPHKIKASADAAPLRDLLVGLTAYNRKGDVVPAIAQNWFTE
                     DEKEWLFILDEKAVWSNGQPVTAQDFVASWRRLIDPQNHSVLSKYLIYMGIENAKAIE
                     EQIKSVEELGVEALNAHTLRIRLNHPNHQLPEMLAHSALLPTYQGIAPTIDNFVSNAS
                     YRLEKLDAQKMVLKARTQEIPFQTIEYDLITTIQNCSAFDIVENPLLNKKTNIVKFPR
                     LCSYYYEFNFDDPLLAKREIREAIRTMVASANSGQEYGVPSQSVIPHSLVKDREKRWN
                     PVVVEQLLTKAGISPYNPLKLTLLYDENSINIANQVTRALSQSELFNITPKMVDWQTL
                     NKVREQKDYQIARAGWCADYPDPIVFLQKFHSMSPDNHSGYKSEIVDQKLNRLQTETL
                     SAEARESLIQEISEQLYSDVAVLPLFQYHHRVGIVSSLLGIDLNNDSEVIYSKDLKRN
                     LANKDNQ"
     gene            complement(20350..21000)
                     /locus_tag="PXF40_000020"
     CDS             complement(20350..21000)
                     /locus_tag="PXF40_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchE family NAAT transporter"
                     /protein_id="HDL5801408.1"
                     /translation="MDIIINFAIYLQFFIGLFAIVNPFGSLPIFFSMTAHQYEGERNR
                     TSLITAVSIGVILLVSLYFGNLILNAFSISLSSFRVAGGILIVSIAMTMISGKLGEHK
                     QNKEEKNEDITEYENIGVVPLAMPIMAGPGAIGSTIVWGTRYHTWEDYVGFSIAIIVF
                     ALICYILFRYSAPLVKKLGKTGSNVVTRIMGLILMALGIEIIVAGITTLFPVLLVK"
     gene            complement(21122..22993)
                     /locus_tag="PXF40_000021"
     CDS             complement(21122..22993)
                     /locus_tag="PXF40_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HDL5801409.1"
                     /translation="MIEKMHERTNGPVFKIIFALVSISFVIGGIGTGLISQDNSVAKV
                     NGEEISQQLFNNTLNREQNRLNAELGSRFWDLMDSPEYAAQFNQSVLNGLIDEELLRQ
                     YAKELKLGISADQIKSEIVNSQMFQQDGKFSNELYQQTLRHNNLSADGYAAIVQEGML
                     QSQLQEGIINSDFNVPAQQALLAKLLLQQREVRLAEFSVAKEMENQTASEQELRAYYE
                     ANKTKLLAPEKLAVEYVTLSPKDVESKVEITNEQIQTYYDRNKADYVTKGEAHLAHIQ
                     VASEAEAQAIEQALKNGEDFATLAKNKSSDTLSANNGGDLGWAKAGTFPKAFEDAVAN
                     LTAGQMSAAVKVDNAYHIIKVLERKPEQVIELAQVKDKIAQTIRQELVLTEYFTVARE
                     MANKAFENNSSLEEVAKAGNVELQKTDLFTRENVPTALQNEKVLKVLFEGELRQNKQN
                     SDALDVGNDANPQTLFVRVSDYDAERPQTFDEAKAAVENFVKAEKAEKALLAKVEENV
                     KALNEGKSVDVKFNAPQTLVYMQAEVENPVLAGTIFAMKKAQDKTTYQMARNQKGDVV
                     IVALDNITEGNAEQFKTLAPQFEQANRLILRNEFLQSLRAKASIEVNEDFMQQRSSH"
     gene            23175..23444
                     /gene="rpsO"
                     /locus_tag="PXF40_000022"
     CDS             23175..23444
                     /gene="rpsO"
                     /locus_tag="PXF40_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HDL5801410.1"
                     /translation="MSLSVEAKAKIVAEFGRDAKDTGSSEVQIALLTAQINHLQAHFA
                     EHKKDHHGRRGLLRMVSRRRKLLDYLKRTDLAKYSETIARLGLRR"
     gene            23516..24385
                     /locus_tag="PXF40_000023"
     CDS             23516..24385
                     /locus_tag="PXF40_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HDL5801411.1"
                     /translation="MAFASLFTLLDDIAAVLDDVSIMTKVAAKKTAGVIGDDLALNAN
                     QVSGKNVVPERELPIVWAVAKGSLINKVILIPLALLLSVFLPQAIIPLLMIGGAYLCF
                     EGVEKLLHRLLHKNNQAHSDETETLSEKDKIKGAIRTDFILSAEIIIIALGVLQDSST
                     LTQILSLSAIGVGITLFVYGLVGLIVKLDDIGLWLMQKKSTFSQAVGKGLLFAMPWFM
                     KGLSVIGTIAMFLVGGGIFTHNLPMIHHFVEQFGISPHFSTLVDFAVGIVVGIIACLI
                     ILPLMKLFSKKAH"
     gene            complement(24475..25740)
                     /locus_tag="PXF40_000024"
     CDS             complement(24475..25740)
                     /locus_tag="PXF40_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HDL5801412.1"
                     /translation="MFRTLFLMLLLLVGLISGPYLAGNQGYVRIETATTVIEMSIVML
                     VVFFVLAMAVVYLLEWIVTKICRMSNGAYNWFSTRKHKKAQQETLEGLMRMSEGNYSK
                     AEKLFSKNAKHADEPVLNLIKAAEAAQQNGDDLAANKYLIKATEIAGPNNVAVELVRT
                     RILLQQGKLPAARTAIDSLLELAPHSDEVLRLAIQIYKESRAYVALDRLLVEIGQRNF
                     LTAEEYAELEYFVDDGLQDERLQEEGQEGLLSWWENQPNRRRKSVYSRVGVIKRLIDS
                     DDHQSAQEIALETLKKFEDEQLQGLFVQLTRLQIDSDSKLLKVLAKRADKANVKYTDD
                     YARALGYIYTRDGQYQKAKSQFELLLAHDECVADDRIMALHVAEQMGDTLMANRIREE
                     NLKQVNMATQSKVNEPLALPQTATESNSL"
     gene            complement(25759..27069)
                     /locus_tag="PXF40_000025"
     CDS             complement(25759..27069)
                     /locus_tag="PXF40_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HDL5801413.1"
                     /translation="MSRSKKVTEHLEHSAEKVVEEAQQAVDSAGSFAKKEIEEDVVNE
                     AIEKDIQTEMQKAPKEQVVVQKSGGKGLALVALLVALAVGGAGHYMANKKFAEVESQI
                     QAVSAKANQPTTQTMVEMPNFENEKAQIAELVTEYQKALERIKALETAQNGYTQQISS
                     LQLQLQKLNNTSGSDNTFWLLSEADFLLNNAARKVVLDNDIETAKNLLLEADQVLSKA
                     PNTIHIREAIKTDLNTLTALHQIDQNALMQRVANLANKLDDLPILESEQASNSKQDGQ
                     VSDSLADWEKNLEKSAASFLDHFIRVSKRNAADEKAFVAPNQEIYLRENIRLRLQIAI
                     LAVPRQQSELYKKSLQTVGSWVRSYFETSNENVQHFLKELDELAEQTIYVDAPTSLQS
                     LKVIAQQLNKTPEKIEKVEIKAEKELEQAEPVKAEQDAMPLSAQ"
     gene            complement(27081..27845)
                     /locus_tag="PXF40_000026"
     CDS             complement(27081..27845)
                     /locus_tag="PXF40_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HDL5801414.1"
                     /translation="MNVLVTRLDSRGQELVDMLNEQQIFAIHQPLFTIEAGKELPLLP
                     SAISRLKSDDYVFVVSPNAVDYAAKTLVDTGFHFRSDLKYFAVGQRTAKYLTEKAEQA
                     VIYPIEFENSEGVLALPEMQNLTDKTILILRADSGRELLAETAVLRGATIQYLECYRR
                     EPVTDDIPEKISLCKRLGVDTIVITSSEILRSLYEQAKADCRAWLFECDLVVVSRRIA
                     KIAKQMGWQEDKIRVSDKADNVTLMNTLLFKVGKSN"
     gene            complement(27845..28780)
                     /gene="hemC"
                     /locus_tag="PXF40_000027"
     CDS             complement(27845..28780)
                     /gene="hemC"
                     /locus_tag="PXF40_000027"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HDL5801415.1"
                     /translation="MKDILRIATRQSPLALWQANFVKSELEKHFPQLSVELVTMVTKG
                     DIILDTPLAKIGGKGLFVKELELALLENRADIAVHSMKDVPMSFPEGLGLAVICERED
                     PRDAFVSNNYHSLEDLPKGAVVGTSSLRRQCQLMAKYPHLEVKSLRGNVGTRLSKLDN
                     GEYDAIILASAGLIRLGLQERIRSYISVEQSLPAAGQGAVGIETRANDERILNYIAKL
                     NHSSTACCVMAERAMNTRLQGGCQVPIGGYATLEGDELTLNALVGSLDGSQIIRASAK
                     GHKQEAEQLGILVAEQLLAQGADKILAAVYNENVQ"
     gene            29076..31685
                     /gene="adhE"
                     /locus_tag="PXF40_000028"
                     /gene_synonym="adhC"
     CDS             29076..31685
                     /gene="adhE"
                     /locus_tag="PXF40_000028"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HDL5801416.1"
                     /translation="MAKNTQPFDAQAEVNELVEKGLKALDEFRKLNQEQVDFIVAKAS
                     VAALDKHGILAMHAYEETGRGVFEDKATKNLFACEYVVNNMRHLKTAGVISEDDVTGI
                     TEIADPVGVVCGITPTTNPTSTTIFKALIALKTRNPIVFAFHPSAQQSSAHAAQIVRD
                     AAVAAGAPENCIQWITQPSMEGTSALMKHPGIATILATGGNAMVEAAYSCGKPALGVG
                     AGNVPAYVEKTAKLKQAVYDIVMSKSFDNGMICASEQAAIVDKEIYAEFIKEMQSYGV
                     YLVNKKEKALLEKYIFGIDKAKDENCSGAKLNSAVVGKPAAWIAEQAGFKVPEKTNIL
                     LAECAFVGEAEPLTREKLSPVLALLKSDSTEHGLELSEAMVNFHGLGHSAAIHTENKA
                     LAKTFGERVKAIRVIWNSPSTFGGIGDVYNSFLPSLTLGCGSYGKNSVGNNVSAVNLI
                     NIKRVGRRRNNMQWFKVPSKIYFERDSIQYLKSMHDVHKVMIVTDRSMVDLGFVDRIT
                     EQLRQRRNQVMIQFFTDVEPNPSLQTVQRGTELMRSFQPDTIIALGGGSPMDAAKIMW
                     LFYEQPEVDFRDLVQKFMDIRKRAFKFPQLGRKAKFVGIPTTSGTGSEVTPFAVITDG
                     DIKYPLADYSLTPTIAIVDPALVMSVPSHVAADTGLDVLTHATEAYTSILANDYTDGL
                     ALQAIKLVFENLEKSVKEFDETAREKMHNASTMAGMAFANAFLGICHSMAHKIGGKFH
                     TIHGRTNAILLPHVIRYNGTRPTKVATWPKYTNYVADVRFQDIARMLGLPAETPEQAV
                     EAYAQAVHDLAVRCGVKMSLREQGVDEQAFLNARRELALHAFEDQCTPANPRLAMIED
                     MEAIMTKAYYGKE"
     gene            31832..32728
                     /locus_tag="PXF40_000029"
     CDS             31832..32728
                     /locus_tag="PXF40_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HDL5801417.1"
                     /translation="MQITILDGGISRELMRRNAPFHQPEWSAAALYEGPHFVQAVHED
                     FIAHGAEVITTDSYAVVPFHIGEKRFAADGKMLADLAGRLAKQAVKNSGNIATQIAGS
                     LPPMFGSYRADLIQMERFAEVAQPLIDGLSPYVDIWLCETQSAIIEPISIKALLPKDN
                     RPLWVSFTLTDDEPTTEPQLRSGESVKQAVEEMVKLGVQAILFNCCQPEVIGEALSVT
                     QKTLAELKATHIRTGAYANAFAPQPKDATANDGLDEVRQDLTLEAYLGWAKKWTEQGA
                     TIIGGCCGIGVEYIETLAKNLK"
     gene            32738..34147
                     /locus_tag="PXF40_000030"
     CDS             32738..34147
                     /locus_tag="PXF40_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HDL5801418.1"
                     /translation="MSNKKIGLISLTALVLSSMIGSGIFSLPQNMAAVAGAEAITIGW
                     LITGVGIIFLGLSFFFISRLRPDLDGGIYTYAREGFGELMGFMSAWGYWLCATIGIVG
                     YLTVAFEGLGVFTDNPNTVIFGQGNTLASFIGSSIIVWLVHALIAGGIKEAAFVNLIA
                     TFVKVAPLILFIGLGIWYFDVDLFNSDVKATALNNSVSDQVKSTMLITLWVFTGVEGA
                     SVLSAHAKKRSDVGLATVLGIIIALALYVAITILSLGILPRETIANMANPSMGPLLDA
                     MMGPTGKVIITACLIVSVLASYISWTMYSAEVPYRGSKNGAFPKILDKVNKNGTPINS
                     LWFTGFIVQFCLVLVFVFEQSYNTLLLISTSMILIPYFLIGAYLFKLAIQTNATWYIK
                     LTGFMAALYGLWIVYAAGLEYLLLSVVLYVPGILLFLYSNYKFNGRLTLSTAEKVILI
                     VLLVIFGYAVIELPALLAA"
     gene            34254..35477
                     /locus_tag="PXF40_000031"
     CDS             34254..35477
                     /locus_tag="PXF40_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF711 family protein"
                     /protein_id="HDL5801419.1"
                     /translation="MQTYQHKALCRVRTITLFLSLTKDKLQWETALNAAKAEFDLLVP
                     AIQTQGYHIQSIRIVTNSFGEYLDLTNIETAKQDLAYLKQLLTQLNDSGLRIRFAIGE
                     AKTPHELALLPELILNYGDLSNACVNIEPDEFGILDNETILQSAQIIKQIAEITPRGE
                     GNFNFTVNFNCKPFIPYFPASYHSSKLPNSFVIGLETPDLLVAVLKELKASPHNDFYR
                     QCYETMSQALQYHVDEVLEAVKSVQHKLQFAFAGIDSSAAPSKNCASMTEVYELMGVP
                     FFGAAGTVEASSLLTKVFKSIKHVPLVGFSGLMLAVTEDLGLAAGTHKAQFDIRALLT
                     YSAVCGIGLDTVPISNEATVEQIAALMRDTGTMAFRLNKPLTVRLFPIPNKSAGEVTE
                     FESDDLCNCRILAVP"
     gene            complement(35515..36711)
                     /locus_tag="PXF40_000032"
     CDS             complement(35515..36711)
                     /locus_tag="PXF40_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HDL5801420.1"
                     /translation="MKQVIRFIVFSTLSLFSFSTFAKTIVAIDAGHGGKDPGAIGKNL
                     GILEKSVTLAISKELKALLDADPNFKAVMTRSGDYFIQLPQRTEIARKHRADLLVSIH
                     ADSSPRGDSLKGASVWVLSNSRASDEMGKWLEDHEKQSELLGGAGSVLSSNNERYLNQ
                     TVLDLQFSHSQRAGYELGKSILAKMSNVAALAKSSPQHASLSVLRSPDIPSVLVETGF
                     LSNSTEEAKLASANYRKQVARAIYNGLVAYRAKNAVASSSVSKKSDKEDKQNKKEEKT
                     AKADLTKKPASEKQEKNTQSDKTKLKEKSKKEDKKEDSAKTNKKKEQQLKEKTALEKD
                     QKNQSKKSDSQREIKVSNSGYHIVQQDETVYSIARAYGTTPQKISELNNLKNYQITVG
                     KKLKVK"
     gene            complement(36731..37222)
                     /gene="tsaE"
                     /locus_tag="PXF40_000033"
     CDS             complement(36731..37222)
                     /gene="tsaE"
                     /locus_tag="PXF40_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HDL5801421.1"
                     /translation="MTDSLSFYCEDETKLLEFGQSFALELKKYLLQDQAHSLVVYLNG
                     ELGAGKTTLTRSIVRAFGHQGNVKSPTYTLVEEYQLPPFSLYHFDLYRLADPEELEFM
                     GIRDYFKPQTLCLLEWAVKGKGMIPEADFVIQIDYKNDGRQISLLPQNQTAVDILVNF
                     HQK"
     gene            complement(37222..37776)
                     /gene="orn"
                     /locus_tag="PXF40_000034"
     CDS             complement(37222..37776)
                     /gene="orn"
                     /locus_tag="PXF40_000034"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HDL5801422.1"
                     /translation="MAQNEQNLIWIDLEMTGLDPEKERIIEIATIVTDKDLNILAEGP
                     VLAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGAS
                     PICGNSIAQDKRFLYKYMPDLADYFHYRHLDVSTLKELARRWKPEILDKFSKGNTHLA
                     LDDIRESINELKFYREHFIQLDQK"
     gene            complement(37786..38265)
                     /gene="coaD"
                     /locus_tag="PXF40_000035"
     CDS             complement(37786..38265)
                     /gene="coaD"
                     /locus_tag="PXF40_000035"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HDL5801423.1"
                     /translation="MSYNVIYAGTFDPITNGHLDIICKASHLFGKVIVAVAQNPSKQP
                     LFSLEERVELVKQSCTQWQNIEVIGFSGLLADFAKQQNAKALIRGIRGADDIDYEIQL
                     AQLNYKLSGDLETIFFPPSIEWRYLSSTMVREIYRHNGDISQFVPQAVKNALKIAKV"
     gene            complement(38267..39547)
                     /gene="waaA"
                     /locus_tag="PXF40_000036"
     CDS             complement(38267..39547)
                     /gene="waaA"
                     /locus_tag="PXF40_000036"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HDL5801424.1"
                     /translation="MLRLLYICLSYLLQPVVLLLMWYKGRKQPAYRKRLWERYGIYDE
                     SEKPKAKGVVIHAASVGEVIAATLLIKAVSKQYPELPLIVTTVTPTGSGRVQAAFGNS
                     VSHFYLPYDLPDAIERFLNFIDPKLMIVIETELWPNLIRKVNIRKIPFVIANARLSPR
                     SAKRYGWVKGSIKDMLNQISLIMAQDEVSRDRYLALGYAPAKMVNTGNLKFDLEITPQ
                     LHQSVIKTKASLNLTERPIWIAGSTHEGEEKLILDAHKLLLEHYPNLVLILVPRHPER
                     FGLVELLIQKSDLNYVKRTENKTLSQNTQVMLGDTMGEMMLLYGLSDIAFVGGSLVKH
                     GGHNPLEPIAFNIPVVSGLYTYNFPEIFEKLREVKGVIEIESSVEALTESIQLLLKQP
                     QIGQEIAKSGLSVLQENQGALKRHLDLLASYLEK"
     gene            complement(39727..41106)
                     /gene="yegQ"
                     /locus_tag="PXF40_000037"
     CDS             complement(39727..41106)
                     /gene="yegQ"
                     /locus_tag="PXF40_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HDL5801425.1"
                     /translation="MTLKYAKPELLSPAGSLKNMRYAFAYGADAIYAGQPRYSLRVRN
                     NEFNHANLKVAIDEAHALGKKFYVVVNIAPHNSKLKTFIKDLKVVVDMKPDALIMSDP
                     GLIMLVRENFPEMDIHLSVQANAVNWATVKFWRQMGLTRVILSRELSLEEIEEIREQV
                     PDMELEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYKMEEGKIDEVGQI
                     VPKYEPEIEVKNVAPTLGNGEATDKVFLYTESQRPDEQMTAFEDEHGTYFMNSKDLRA
                     VQHVERLTQMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDESLMDTLESL
                     AHRGYTEGFLRRHTHDEYQNYEYGYSISERQQFVGEFTGKRNAEGLAEVAVKNKFLVG
                     DSVEMMTPKGNIVFKIERMLNRKNENVDAALGDGHFVFLDVPADIELDFALLMRNLVN
                     TNTRNPHQA"
     gene            41234..41605
                     /locus_tag="PXF40_000038"
     CDS             41234..41605
                     /locus_tag="PXF40_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801426.1"
                     /translation="MKLKYLLATTLLAFSTFTAAQSIKTEMMQMNMQANKLMRAESAE
                     EFSEIANDFIIITEKTKGIFPNSVEGDKAAQEDYQAGMQKLIDMVNQASEKAQAGELQ
                     EAKMLISELEMIKREYHKKYK"
     gene            complement(41644..45120)
                     /gene="dnaE"
                     /locus_tag="PXF40_000039"
     CDS             complement(41644..45120)
                     /gene="dnaE"
                     /locus_tag="PXF40_000039"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HDL5801427.1"
                     /translation="MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAAANNMVAMGLTDF
                     INFCGLVKFYGEALGAGIKPIIGADVYVRTESGNEDYFELTLLAKNNKGYHNITQILS
                     KAYQQGYVEFPMVEREWLAELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQY
                     YPNHFYLSVCRTGRADEERYIKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAI
                     HDSYTLDDPKRPKKYSPKQYFRTEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYF
                     LPNFPTGELSTEDFLVKKSKEGLEERLEFLFPDPEERANKRSVYDERLQVELDVINQM
                     GFPGYFLIVMEFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLN
                     PERVSMPDFDVDFCMDGRDRVIEHVAETYGRQAVSQIITFGTMAAKAVIRDVGRVLGH
                     PYSFVDRISKLIPPDPGMTLEKAFAAEPKLPELYEADEEVKDLIDMARKLEGVTRNAG
                     KHAGGVVIAPTAITDFSPLYCDSEGLHPVTHFDKNDVEYAGLVKFDFLGLRTLTIIKW
                     ALEMINERLAREGKEPIRIETIPLDDKKSFALLLAAKTTAVFQLESRGMKDLISRLKP
                     DCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEVSYPDPQYQHECLKPILEPTYGV
                     IVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMAAQREVFEKGAEAKGIDGKLA
                     GQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTSEMDNTDKIVG
                     FYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGVGEGPIEAILAARQKEG
                     KFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKNLEDALKASDQHAKM
                     EELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYLSGHPIGRFLKEL
                     SHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDRSGKLDITLFS
                     EALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAKSLALAISK
                     EQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAMFSELKA
                     LLGENSVELEFE"
     gene            complement(45345..46442)
                     /gene="lptG"
                     /locus_tag="PXF40_000040"
     CDS             complement(45345..46442)
                     /gene="lptG"
                     /locus_tag="PXF40_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HDL5801428.1"
                     /translation="MQFFSMNILERYIGKTILSAIFLTLFMLIGLGAIIKFVEEFRDV
                     GRGSYDGLKAAYYTFLTIPRDIETFFPIAALLGSLLGLGNLASLSELVVMQASGFSRF
                     RIGLAVMKTALPLVIFTMIIGEWGVPQTEQFARNMRSIAQSGGSMLATKDGFWAKDGN
                     SFIYINHIKNEKSLDNVLIYQFGEGQNKRELQSVLKARTANYSDEKGWVLSKVEKSTV
                     GENQIQQAKQPDQVWQTSLTPSKLGIVSLKPESLSISGLADYVGFLKDTGQDPKRFEI
                     TFWRKVFQPISMAVMMLLAISFIFGPLRSSTMGAKIVIGIVAGFMFYVANIVFGNLSL
                     IATWLPIPVGALIPSLLCLIIVWWLLSKKRD"
     gene            complement(46442..47551)
                     /gene="lptF"
                     /locus_tag="PXF40_000041"
     CDS             complement(46442..47551)
                     /gene="lptF"
                     /locus_tag="PXF40_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HDL5801429.1"
                     /translation="MILSRYLTKEIFKSQLAILFILLLIFFCQQLVRVLSSAVSGKVP
                     ADLVVSLLGLGMPTMAQLMLPLSLFIALLLTLGRFYAESEITVMRACGIGQGLLVKVA
                     MFLSIFTTALAVYNVFWLTPWAINKQSEMLAEAKANPRFAALSAGQFMSAGGYVLFID
                     KIENNSLNDIYVFQPEQQKKNKPSVVVAESGTLQGLPNGDQVLTLAESKRFEGTPQSA
                     DFRISHFENYSAYLGYQDVESDEKLVQRADFKKLMETKTPEAKAELHWRLALILAVPL
                     MALLAVPMSSVNPRQGRFAKLLPALLLYLIYFLLQSSLKSSGASGKLNAEVLMPLVSV
                     AFLVLGVILNAWDSKFMSKLRYQFGAKKLTNKAVA"
     gene            complement(47725..48522)
                     /locus_tag="PXF40_000042"
     CDS             complement(47725..48522)
                     /locus_tag="PXF40_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801430.1"
                     /translation="MRFWGKTFVVGLIGLGTQNTIFANDDAQISRYEQAKLRLSYDGN
                     VGNLLQQLSQRLKVGFIAYDVDITRKISLQNETETAIKTINEQIESQLTNIDVRFEKI
                     GERLFLVVSAKDVAPLLQNEPKEVQFVGDVIFDGEPNLTEQAQSTAEATKVQNILNIA
                     TNQEKIMAAKGKKAPQYKTVTKDNIGLKNIRVTALGTFLVFDTSVDAAKLRVKGNFED
                     IAQGENIIAILHQNTEAPPKIEIEDSQGKKLILEAHKATSSKKSKKQ"
     gene            48760..50256
                     /gene="pepA"
                     /locus_tag="PXF40_000043"
     CDS             48760..50256
                     /gene="pepA"
                     /locus_tag="PXF40_000043"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HDL5801431.1"
                     /translation="MEFSVKNGSVEKQRTACLVVGVYEPRRLCSAAEQLDKLSNGYIS
                     TLLRRGDLEGKAGQTLLLHNVPNVLADRVLLVGCGKERELTERQYKQIIQKSVQTINE
                     TGSMEAVSFLTELHVKGRTPYWNVRFAVEAIQEQLYAYNDFKSIKPEVRRELRRVIFN
                     VAHRKDLPDAERALEHGKAVALGISHAKNVANCPPNVCNPHYLAELAKGLAYDYPAIS
                     TTIVDEKQMAELGMNAYLAVSRASENEAFLSVIEYKGNPNADAKPIILVGKGMTFDSG
                     GLSIKPAEAMDEMKYDMCGAATVYGTIKAIAEMKLPLNVIGLLAGCENAVDGKAYRPG
                     DILTTMSGLTVEVLNTDAEGRLVLCDALSYVERFEPELVIDIATLTGACMIALGNHNS
                     GLMSPHNGLANELLAAAEQADDKAWRLPLGEEYQEQLKSNFADLANIGGRLGGACTAG
                     QFLSNFTKKYTWAHLDIAGTAWKSGAAKGATGRPVSLLTQFLINKAQV"
     gene            50430..51377
                     /gene="cysK"
                     /locus_tag="PXF40_000044"
     CDS             50430..51377
                     /gene="cysK"
                     /locus_tag="PXF40_000044"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HDL5801432.1"
                     /translation="MTIYADNSYSIGNTPLVRLKNFGNGNIVVKVEGRNPSFSVKCRI
                     GANMVWQAEKDGILTKDKEIVDATSGNTGIALAYVAAARGYKLTLTMPETMSTERKRL
                     LRGLGVNLVLTEGAKGMKGAIAKAEEIAASDPDRYVTLKQFENPANPAIHQQTTGPEI
                     WDATEGKIDVLVAGVGTGGTITGVSRAIKQDKGKQIISVAVEPSESPVITQTLNGEEV
                     KPGPHKIQGIGAGFIPKNLDLSLLDRVEQVSSEEAITTARRLMAEEGILGGISSGAAV
                     AAADRIAKLPEFADKLIVVILPSASERYLSTLLFEGIEA"
     gene            51563..52825
                     /gene="rho"
                     /locus_tag="PXF40_000045"
     CDS             51563..52825
                     /gene="rho"
                     /locus_tag="PXF40_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017492510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HDL5801433.1"
                     /translation="MHLTQLKNTPVSKLVEMGENQMGLENLARLRKQDIVFAILKQHA
                     KSGEDIFGQGVLEILPDGFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKI
                     RPPKEGERYFALLKVDSVNDDKPEASRSKILFENLTPLHANSRLKMERGNGSKEDLTA
                     RILDLAAPIGKGQRALIVAPPKAGKTVLLQNIAQSITHNHPECELIVLLIDERPEEVT
                     EMQRTVRGEVIASTFDEPATRHVQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYN
                     TVTPVSGKILSGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIFE
                     EFKGTGNMELHLSRRIAERRIFPAIDFNRSGTRKDDLLMAADELQKTWMLRKVLNPMD
                     EVDAIEWLIDKLMMAKTNEEFFEIMKRS"
     gene            complement(52886..54004)
                     /locus_tag="PXF40_000046"
     CDS             complement(52886..54004)
                     /locus_tag="PXF40_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5801434.1"
                     /translation="MKKIKTTLSALALSLSLISVNSWAIPADYLSQDNISQYDKAFNF
                     VLAKVLPAPKGKEDGRGAPIEHLVIQYAPDYVDDPYLKEDVLNFRRWYWQAMYASLDQ
                     KVKEKPTYLNTYRLQAEAYFVNKEYREALSQLDQILRQNPRDIHALAMTVLASRVLED
                     TEQETARLSALKQLAPEVAQRMTDFFAFTEQTLAASYGNEPQTAMIPDTIAVFGSTPN
                     KDGTPSPLLLDRLQKTKEMAQKFPQAKIIVSGGAVKTEFAEADVMAKWLSENGIEKDR
                     LLLDPVARDTPGNAVGIIKLMQTYNGKKVLGIGTLQHIPRATAVLKGYAQHIGYPIEM
                     DSVGGGKPATPGKAKIEALYTYVNVARSMGLFELGDFK"
     gene            complement(54017..56164)
                     /locus_tag="PXF40_000047"
     CDS             complement(54017..56164)
                     /locus_tag="PXF40_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5801435.1"
                     /translation="MKRLRYSYLALILGSALPLSAYADGYLSNDNIRQFDARFNFFLA
                     NPLPAPIAKADGRGEAIENLVVKYASDYLNDIYLKEDVIRFRRWQWQDLYTSLDLKTK
                     QKPDYLNTYRLQAEAYFINKQYQEALSQLDQILRRNPNDVHAMAMSVVASRVLENPNT
                     EAERLLALYQISPSIAQKVQQYLHFTDTMLAASYGSEPQTTMIPDTIAVFGQSPNPDG
                     TPSKGLLQRLEKTKEMAEKFPNAKIILSGGPVRYIYAEADVMKKWLIENGVDESRLLL
                     DDVARDTPGNAVGIIDFMKEYGGRKVLGIGTILHLPRAMSVLKSYADSIGYELEIDSA
                     GGGSPPNEKNKKGEALYTFVNVARAMGLFTLGDFENLLAKEQAEKEQREALEKAQQNY
                     LEKLVAERDQAVKNAENSANELEVARQALETAKQAHQQAEEELNKELSKTQEQLKQST
                     EALSRLIIKQNNPFSEHYVVQLNLMEQATYDLYRRLAEIEHTQDWNLWLSDSLSKYRL
                     KNRSTEDYHLLHIGLDHQVSHNWSIGGVFGISQGQIENRTHKVKGTSAGIYAGYRPTS
                     GLFWTNFFNYSHFTNQSGVTKRDNNAYSLSSEIGRNIVMSHQWQITPKLQLGWAKAGS
                     ARMFWAGTGLRLGKVIELNAIKLKPYADISYRFRNRHIDTLDSLSDRHRNVISIGIQA
                     VGNRHYFAIEGSMLHGDALKRSYGLHANYHYQW"
     gene            complement(56164..58107)
                     /locus_tag="PXF40_000048"
     CDS             complement(56164..58107)
                     /locus_tag="PXF40_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HDL5801436.1"
                     /translation="MSQDIQADLKKILALLSRNRRFQSLFLLLLRSEQFINSDALSTE
                     LQLSVRTVKKEIKLLKEKLEPYGIQIFSRPFYGYKLLIQFEELHTQLKQYFQISQPMT
                     VNNKFESRVNAILRRLLVSQRALKVEDFQSELYLSFTSALTKEFSQVKALLGKYGLIL
                     EAKPYHGMNIVGESYRKIMLTVRLYKYFTQLEHPFGIKEFEQCFACPMTEKIRERLAK
                     TIIHFNLVFSDIYAERFIIYLRYFYNQQPELLLPKLNFNYQQTNEYQFVIKLLEQLRE
                     QDSRFEFNPEVIRFLTYIAIASTDLYRFKDCNSDNYPLLLDKAWEIHRFIFTQFSAYL
                     NLSEIHDDTCRKDLLKMLIPIAMKMMLSISDDVDLGLFNQTELHRNPILAHTVEKLVD
                     DIEKNYGYSLSIREQYFIFDIFSGMVNRIELERKPLRLAIIALNGRLSTQQLKRNIKR
                     YFSDYILKIETKVLYELAIMEDKPYDYYLCNEYGKNMAIPYKPIYFADSSLNENEYAT
                     SLNEVFYHAYQYDEVLPSIKSIEIEAQYRLNEFHLEQEYLNYEQIILENKQDKIKLFY
                     QLNASVEKFEIYYFKNKEDFTLYGYTKFIVMSLNVIEQPQKLKMILNIINKIAQTNFI
                     LNQLCWLDVKSYKYFFTQYKEKS"
     gene            complement(58415..59635)
                     /gene="agp"
                     /locus_tag="PXF40_000049"
                     /pseudo
     CDS             complement(58415..59635)
                     /gene="agp"
                     /locus_tag="PXF40_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628146.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glucose-1-phosphatase/inositol
                     phosphatase"
     gene            complement(59725..60762)
                     /locus_tag="PXF40_000050"
     CDS             complement(59725..60762)
                     /locus_tag="PXF40_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HDL5801437.1"
                     /translation="MDSVYDIIRLEQGRYLFRQQPAQSVQIFFLDNPDSKDSKWLAET
                     DLAEFELKLSACEARPFFLIQSANGEQIVAERTLPVAGMNNFRDMGGYVAHQGKRVKW
                     GKLYRSDHLHNLRDEGVAYLDKLGIQTVIDYRSPNEVAKYPNPPINGREQTFRLDPNA
                     HTAELAAQFSADKHDEDRNLVNKIIAQKAEGNLINRYDIVMAQYRNFVEKAECQTAFA
                     EMLRLATDPENAPLVQHCRGGKDRTGFGAMLLLGILGVSKADIIADYMLTHYNRLARN
                     EEKMAIYRTFTQDQDVLDYLLSLIDTQPEFIEQSLNTIETQYGTIEQYAQRVLGITAK
                     EIEALRANYLA"
     gene            complement(60762..61568)
                     /locus_tag="PXF40_000051"
     CDS             complement(60762..61568)
                     /locus_tag="PXF40_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HDL5801438.1"
                     /translation="MSNKITKQDLNKVFWRMQVLNVTNNFQSMQAIGFLSSFIPVLKR
                     LYKDRPQEERAEAMKRHLKFFNSHVNSDALILGIAAAVEETTKEDEKETVTAIKTGLM
                     GPLAGLGDSLLKFTWLPICGSIGAALALSGNVLGPILMFLLYNSVNIATKYYGIHLGY
                     SKGVDLIHGAGNNILQRLGNMANVVGLMVIGALIASVVKVKVVSQIAAGDNVIKFQEM
                     LDKVMPGLLSLLLTVVIYWILKKTNGKYAATMILATMGICIGLVYAGILG"
     gene            complement(61565..62332)
                     /locus_tag="PXF40_000052"
     CDS             complement(61565..62332)
                     /locus_tag="PXF40_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5801439.1"
                     /translation="MLTALLVACWAGICALDDIGTQMIRRPLLIAPVVGLIMGDLETA
                     LIIGATLEVMWMGIGNVGAYSAPDMISGTAIGTALGIAAGEASTAVALAVPTSLLAQQ
                     LLILYRSGVCALNPIAERWAASGDFDKIFRIHYIPMLIAFSIRAIPTFLAVYYGADII
                     AQAVSALPAKVITGLNVAGKIIPAIGIGLLMLMMIKKAELWTFLIAGFTLAVYLKLSV
                     LPITLIALPLALIYDLAVSKKAEAAPTKTADEEDYDL"
     gene            complement(62335..62802)
                     /locus_tag="PXF40_000053"
     CDS             complement(62335..62802)
                     /locus_tag="PXF40_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5801440.1"
                     /translation="MICFSRIDDRLIHGQVVTTWVNLHRIEQIIVLNDAVAADPTQKQ
                     ILTMAAPQGIKVVAFGIEKFGEVLQKTQITRRTMLLFTNSIDVLRTVELGVSIDKLNV
                     GGMRYQARREQLSKAVSVTPEERQAFKTLLEKGVEVTVQMVPNDEKLNLQEII"
     gene            complement(62789..63220)
                     /locus_tag="PXF40_000054"
     CDS             complement(62789..63220)
                     /locus_tag="PXF40_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5801441.1"
                     /translation="MSNQIALLLMSHGSFARAALASAELIVGQQENVAAIGVVAVDNV
                     ADIKRQMEQTIAELNTDKGLIILTDIVGGTPMNLASSQLTHPNVFACSGLNLPLLLEV
                     LMSRDGNLQEIRENLPLAYQNGFSLRTQQDFVSQEDDDDLL"
     gene            complement(63403..64587)
                     /locus_tag="PXF40_000055"
     CDS             complement(63403..64587)
                     /locus_tag="PXF40_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HDL5801442.1"
                     /translation="MTSSNTIKQLDKDYIAQTYGRFDLALSHGKGCEVWDFEGNKYLD
                     FTSGIGVNSLGWADEDWLQAVTTQAGKLAHTSNLFFTEPASQLAQKLVAASGLKRAFF
                     CNSGAEANEGAIKTARKYSFDKYGSGRSTVLTLVNSFHGRTISTLASTGQEVFHKHFF
                     PFTEGFEYLPVNGIEALKARLETENVCGILLEVVQGEGGVCPLEADYLHAVQSLCQEK
                     DILFMIDEVQTGIGRTGTLFAYQQFDLTPGLVTLAKGLGGGLPIGAFLLGEKVEMTLG
                     KSDHGSTFGGNPVSCAAANVVIDKINAEFLAQVQQKGQLLQQRLASLPKVKSVSGLGL
                     MLGVEFEEGILAADIVAKCINKGVLFLTAKSKLRLLPPLMISEQQIEQGIRVLEDVLK
                     DS"
     gene            complement(64600..65454)
                     /gene="argB"
                     /locus_tag="PXF40_000056"
     CDS             complement(64600..65454)
                     /gene="argB"
                     /locus_tag="PXF40_000056"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HDL5801443.1"
                     /translation="MQQQEINQFANLLEKSTACLVKWQGKIIVVKYGGNAMINEELKK
                     SVMADLLLLHRLGVKVVLVHGGGLEISQGVKLLGKEPQFINGLRVTDSDTINVVLQML
                     AGKVNKSLVALLKGKGIGLCGIDGAMLQCKKLEAEVDYGFVGDIVKVDPTVIEIALNA
                     GLIPVVSTVGVDENGQAYNINADTAASEIAIALQAEKLVSMTDIAGLLRDRFDESTLI
                     PEVEVSEVQSLIEQGIIAGGMIPKIACCTDFIRAGGSEANIIDGRIDHAILVEMFGGK
                     NGTRFYKK"
     gene            complement(65546..66487)
                     /gene="argC"
                     /locus_tag="PXF40_000057"
     CDS             complement(65546..66487)
                     /gene="argC"
                     /locus_tag="PXF40_000057"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HDL5801444.1"
                     /translation="MSKYKIFVDGAVGTTGLRIHERLSQADDIELLTLPEEQRKDLNA
                     RVAKVAEADLTFLCLPDEASKELVANAPENTRICDTSTAHRVNPNWVYGFPELSGQRE
                     KIQNAKRVAVPGCHATGYIALVRPLVEKGILPADYPLSCHSLTGYSGGGKAMIADYEN
                     ENSPNAFNAPRVYGLTLQHKHLPEMQAVTQMQNPPIFTPVVADYYSGMLVTVPLQIFA
                     LQAVKSGEEIANLLADYYQTSRLIHVHPFQSLPEDGMLAANAYAGKDSLEIFIYGNST
                     QLLLAARFDNLGKGASGAAVQCMNIMLGRDEVEGLEL"
     gene            complement(66630..67247)
                     /locus_tag="PXF40_000058"
     CDS             complement(66630..67247)
                     /locus_tag="PXF40_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HDL5801445.1"
                     /translation="MITLHYLNSSCSHRIVWLLEALGLDYELKIYHREESGFAPMEVK
                     ALHPLGKAPVLQDGDLVLAEGNAIIQHLIARYAEGKFEPTRGSEAYSMYHYWLSISAS
                     LFSANLVTMLANRSDLGAFGDYAKAQTPLYFNHIEQTLSDKKWIVGDELTGADFSLCF
                     PLQWGRNFVEMANYPNIARYLEQVENHPAYQKANQKALKLDMNRF"
     gene            complement(67331..68455)
                     /locus_tag="PXF40_000059"
     CDS             complement(67331..68455)
                     /locus_tag="PXF40_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent flavin oxidoreductase"
                     /protein_id="HDL5801446.1"
                     /translation="MINLFTPYTLNNDVEIKNRLVVAPMTHSASNDDGTISEQERHFL
                     HNRAADMGLFITAATGVMRNGKAFYGQPEALDERYLASLTETANILKNQGTKAILQIF
                     HGGAQAIPALLDGANAVAPSEHANGAKALTADEVKQMIQAFANATDLAIQAGFDGVEI
                     HGANGYLIQQFFSTEFNQRTDEWGGSLEKRLRFPLAVVEAAVSVREKHQRPDFIIGYR
                     FSPEEPGEHGLTMTDTYALIDALCEKPLQYLHISLWDFGKKARRGADTNFTRMQLVHQ
                     HINGRLPLIGVGNLLTGEQIRKAYATGWAEFIALGKAVMLNPNVATLLKDNRDSEIVS
                     ELDPQQADHYGIPDRLWGYCVQGGAWLPPLKGQNGQPMDI"
     gene            complement(68519..69199)
                     /locus_tag="PXF40_000060"
     CDS             complement(68519..69199)
                     /locus_tag="PXF40_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HDL5801447.1"
                     /translation="MKMLDFETTVKTRQSIRKFLPLPMTETEIKQILADAQNAPSACN
                     TQPWLVHVASGETLARLKARFKKTFEAGINDADFEFNQTKFTGDYEPRWRNQYSHVFT
                     TSYGIPREDKAGRQVVYDDNIVGYGAPHMAFLFMPSIDGHDVNIASDVGMYSQTFLLS
                     LTARGFGGIPQLALAMFAKDVREELGIPEHYKLLHAISFGHPDWDAMQNKHHLGRVPV
                     EESATLHW"
     gene            complement(69216..69647)
                     /locus_tag="PXF40_000061"
     CDS             complement(69216..69647)
                     /locus_tag="PXF40_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HDL5801448.1"
                     /translation="MKIFYHTSATATGGRDGRTQVDDGSIGFDLVGFQNESGKVGTNP
                     EQLFAMGYAACFDSAMNHVAPTLGIKPTKSSTTVAVGIGQKADGAFGLDLDITITVEG
                     ISAEEAKTLISKAHEVCPYSNATRGNVDVRLHVKVVSEFDL"
     gene            69762..70613
                     /locus_tag="PXF40_000062"
     CDS             69762..70613
                     /locus_tag="PXF40_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HDL5801449.1"
                     /translation="MQTHRAIIESIFALAPKNELWATPISGLTVHAADRSIRFNGYIQ
                     DPSLCVVLLGERQICTNGHCQVFGNQEMMFCPVNLPIVTQTLSVAENQPYLAISLRLD
                     FDLIAKIITQLPPQKISENINQRTKWELENEIKDCLLRLLNLLNSPNHIHFLAPLILN
                     ELYFYLLQSEQGGYIRSLLSQDGNIAKIANATKILERKFADTLNMSALAEEVGMSVAG
                     FYAHFKSVTSMTPLQYQKSLRLNAAREKLQAGVSVSETAYQVGYESPSQFSREYKRQF
                     GESPKGR"
     gene            complement(70689..71408)
                     /gene="deoD"
                     /locus_tag="PXF40_000063"
     CDS             complement(70689..71408)
                     /gene="deoD"
                     /locus_tag="PXF40_000063"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HDL5801450.1"
                     /translation="MATPHINAPEGAFADVVIMPGDPLRAKYIAETFLEDAKEVTNVR
                     NMLGYTGTYKGRRISVMGHGMGIPSCSIYAKELITEYGVKKIIRVGSCGAVRNDVKVR
                     DIVIGVGACTDSKVNRIRFRDNDFAAIADFDMTLAAHQAAKAKGIEARFGNLFSADLF
                     YSPDVEMFDVMEKYGILGVEMEAAGIYAVAAEYGAKALAICTVSDHIRTGEQTTSEER
                     QLTFNGMIEIALESVLIGDKQ"
     gene            complement(71429..72205)
                     /gene="deoC"
                     /locus_tag="PXF40_000064"
     CDS             complement(71429..72205)
                     /gene="deoC"
                     /locus_tag="PXF40_000064"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HDL5801451.1"
                     /translation="MNLKKSAEIALSLMDLTTLNDNDTDEKVIALCQQANTKFGTPAA
                     ICIYPRFIPIARKALKQQGIEQVKIATVTNFPHGNDDIEIAVAETKAAVAYGADEVDV
                     VFPYKALIAGNEQIGFDLVKQCKAVCAANNVLLKVIIETGELKSAELIRKASEISIQA
                     GADFIKTSTGKVAVNATLESARIMLETIRDLGVADRVGFKAAGGVKTSEEAAQYLALA
                     ESILGNDWVSASHFRFGASSLLANLLATLNDEQQQAVQGY"
     gene            complement(72350..73612)
                     /locus_tag="PXF40_000065"
     CDS             complement(72350..73612)
                     /locus_tag="PXF40_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HDL5801452.1"
                     /translation="MGTLNSFLGIIVLLFIAFLFSSNKRAINVRTVLGALALQVAIGA
                     LVLYVPAGRDALNAMATGVSKVISYGNEGISFLFGGLVSDKMFEVFGGGGFVFAFRVL
                     PVIIFFSALISLLYYIGVMQWVIRILGGLLQKALGTSKAESMSAAANIFVGQTEAPLV
                     VKPYISKMTESELFAIMAGGLASIAGSVMAGYAGMGVPLTYLIAASFMAAPAGLLFAK
                     IMVPQTEKFRDELEAVDLEKPANILDAAASGASSGMQLALNVGAMLIAFVALIALVNG
                     ILGGIGGWFGYDTLNLGQIFGWVFKPLAWVIGVPWEEAEIAGQMIGLKLAVNEFVGYL
                     EFAKYLAPESTVHLTDKTVAIITFALCGFANFSSIAILIGGIGAMAPSRRGDIARLGI
                     KAVIAGSLANLMSATIAGLFIGLGGAVL"
     gene            73793..74299
                     /gene="msrA"
                     /locus_tag="PXF40_000066"
     CDS             73793..74299
                     /gene="msrA"
                     /locus_tag="PXF40_000066"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5801453.1"
                     /translation="MQNIREIYLAGGCFWGVESFMQRIKGVIKAQSGYANGNTDNPSY
                     QEVCAGSGHAEVVKVTYDANQISLAKLLDYFFKVIDPVSINKQGGDIGIQYRTGIYYT
                     DPQDEPVVTAALAQLQTQFDQPLAVENQMLEQYFPAEEYHQEYLVKNPNGYCHIDIQL
                     MNEILKNQ"
     gene            complement(74336..75136)
                     /locus_tag="PXF40_000067"
     CDS             complement(74336..75136)
                     /locus_tag="PXF40_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_162680708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5801454.1"
                     /translation="MKFSVLMSLYIKEQPQYLRECFESLKVQTVQADEIVVCFDGAVT
                     PELEAIVEEYSAILPINAVKFPQNRGLGKTLNDGLTYCKNEWVFRMDTDDICMPERFE
                     KQVAFIEQNPETVIFGGQIAEFGQDIHDLVAYRNVPTTVEEIVRFTRLRCPFNHMTVA
                     YQKSKVLEVGGYQDLQEDYYLWIKLIAQFKQVANLPDLLVYARVGNGMVGRRRGMAQA
                     EAEWRLYKLKNRCQIHDPISGFGIFIMRAIPRLLPVSALKKVYGLLRK"
     gene            complement(75136..76101)
                     /locus_tag="PXF40_000068"
     CDS             complement(75136..76101)
                     /locus_tag="PXF40_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5801455.1"
                     /translation="MFSIIVPSYNRNQEINALLESLKQQTAYNFEVIIVDDCSKIPVS
                     ETLGILNEFNDISTKEKVRELLTRDSLSHIYSYPFDVKVVRNNPNVGAAQSRNVGATN
                     ATQEWLLFLDDDDRFMPEKCERLAAEIANNPTANFVYHPAKCEMVNEGFTYVTKPFKH
                     KSELTKENILKANKIGGMPMIGLKKSLFCKIGGLSDRLRSLEDYDFLLKLLEEPSFEP
                     LYVDEALTYCTFHTKRSSVSTDTTNTEKAIEYIQQTYIKTPEANNFKLNSLYILSYPH
                     VMNLSRKAAGYYFEMFKQTKNIKQLIIALVIFISPKLAINLKRFM"
     gene            complement(76094..77281)
                     /locus_tag="PXF40_000069"
     CDS             complement(76094..77281)
                     /locus_tag="PXF40_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801456.1"
                     /translation="MSALINLFYLYDPWFFHFLRMSFVVGLVACGYLVFQIIKGKSNG
                     IIIPKDSLIAIIALIGFSIIPLLINSTKEIGVLAMYVKMLILFVFGIAIYNVFYHNQQ
                     GKTLFVRDLKIGIAIQWICGVTALLGLPFMVDFLLSSNAMMPRFFGSEQEYRLYNITS
                     SAFFQLSIFYLMLLHFLLAYNKKTDVVNEWFLFLLLCVGLISGRTFLLMSVISIALYF
                     KWKYILPLIAFTALILFLAIVFPENRYVEHALEPVINLLSGTGKVSSSTDNLVKNHLF
                     LPTLNQFISGDGLYYTETGGYYGGSDSGYIRQVLYGGVSYMLACFAFTYYFVRKVAVN
                     WFEGSWIFTLSTIGILAILNIKADTFAFPGLMMLFLMFLSLFGTSGRNVTFFCKNKEA
                     EYV"
BASE COUNT        22781 a        16957 c        14816 g        22801 t
ORIGIN      
        1 aagatagaga ttaatctata aaatttcaag caagatttac caattacacc aataaatatt
       61 tgcatagtga gattttatta tctcttcaat tatttaatta aaagtggaaa gggctatatt
      121 caaacaactt taacaaaaaa ggactaatca ctaagattag cccaactcgt tcccaacaaa
      181 taattagaac ttcaccccga aaccggcaaa taagacaacc ggatcaagtt ttacttttac
      241 ttcgtgatct gcacctgctg ctttaaattt tgcggttgtt ttaatgcgtg tgtaccaagc
      301 tgccgcgttg aagtagatgt tatcggttaa ttttacatca acacctaggt ttgctaccgg
      361 tccgaaagaa tgttttttta cacttaagtc agtaacagca gggctaactg atttagcgtg
      421 gtagaagcga gtgtaattta aacctgcacc aacgtaaggt tttacttttg cagttagctc
      481 aaagaaatag tattgggcat aaaggctcgg tggtaattgt tttaagataa caactctatc
      541 caaatctact tctgcacctg attctaaaac tttggctttg gcattaattt tatgagagaa
      601 aggggttgca cctaataact caatacccac attatcggct aacatataag ttgcagttaa
      661 gcctaactga gtattgtttt tcacttctaa atctacatca atacctgtcg ctgcttttga
      721 ttttgcatct gaacttgaat ttgccttaac atgtaccgca ccggcacgga atatcacatc
      781 acctgcttga tgtgccaccg cagttccagt taataatgcc ccacctaaaa taattgctaa
      841 agttgatttt ttcattttca tatcctcaaa aataattaga atacctataa tgaggtaaac
      901 tttagcgaag tgtaaatgaa atgaaataga aatgaattga tatttatcaa acttttaaca
      961 caaagatacc caacaagagt tattttattt atttttgtga tctttttcac atttttactt
     1021 gaaaattgtt taccaagctc catttagtgt ttcaacaaga gatgtaaata aaaatttaca
     1081 ctttctaaac tcattgtaag gagaaagaaa tgaattttga aaaaatgacc acaaaactgc
     1141 aagaagcctt ggctgaatca cagtcgcttg cggtaggaaa agataatccg tacatcgaac
     1201 cggcacattt gctctatgcg ttgttaaaac aagaaggtgg ctcgattgct tctttgttta
     1261 ccacattaaa tgttgatgta ccgactttaa ttcgtgaatt acaacaaatt ttagaccgct
     1321 tgccgaaagt tcaaggcggt aacacccaag tttcacaaca gttggtcaga ctgttaaatc
     1381 aatcagacaa actggcacaa caattcggcg acagctttat ttcatcagaa ctatttgttc
     1441 tagctgcact tgatgacaat ggcgatttgg ggaaactatt taaacaattt ggcttaaaca
     1501 aggaaaaact aacacaagcc atcagccaaa ttcgaggagg agacacagtg aataatcaaa
     1561 atgcggaaga tacccgccaa gcactcaaaa aatatacgat tgatttaacc gaaagagcca
     1621 aagccggtaa attagacccg gttatcgggc gtgatgaaga aattcgccgt gcggtgcaag
     1681 tcttacaacg ccgtaccaaa aacaaccctg tgttaattgg tgaaccgggt gtggggaaaa
     1741 cggcgattgt agaaggcttg gcacagcgta ttgtaaacgg cgaagtgccg gaaggcttga
     1801 aaaataagcg tgtactttcg ctggatatgg gagcattaat tgccggtgcg aaatatcgtg
     1861 gtgaatttga agagcgttta aaagcggttt taaacgacct ggcgaaagaa gaagggcaag
     1921 ttatcctctt tattgatgaa attcacacga tggttggagc aggcaaaaca gacggagcaa
     1981 tggacgccgg caacttatta aaaccaagcc ttgcccgtgg tgaattgcac tgtgtggggg
     2041 ctacaaccct tgatgaatat cgccaataca ttgaaaaaga cgcagccctt gaacgccgtt
     2101 tccaaaaagt attggtggac gaaccaacgg ttgaagatac gattgcgatt ttacgtggtt
     2161 tgaaagagcg ttatgaaatc catcatcacg ttcaaattac agaccctgcc atcgtggcgg
     2221 cggcaacgct ttcgcaccgt tatgtgtctg accgtcaatt gccggataaa gcgattgact
     2281 tgattgatga agccgcttca agcctgcgta tggagattga ttctaaacct gagccgttgg
     2341 ataaattaga acgccgcatt atccaactca aattggaacg ccaagcgtta caaaaagagg
     2401 aagatgaagc gagccgtcag cgtttagcca aattagacga agaaatggca gcgaaagagc
     2461 gtgaatattc cgagctggaa gaaatctgga aagcggaaaa atccgcctta cttggtacac
     2521 agcatattaa atcggagttg gaaaatgccc gaattgcgat ggatcaggct cgccgtgaaa
     2581 acgatttcga gaagatgtcg gaattgcaat atggcgtgat tccaaacttg gaaaaacagt
     2641 tacaagcggt cgaaaatggc gaaaaaaatg cagatgctca gctcctccgt actaaagtca
     2701 ccgaagagga aattgcggaa gtgctttcaa aagcaacggg cattcctgtt gcaaaaatga
     2761 tggaaggcga gaaggaaaaa ctccttcgta tggaagaagt attacacgct cgggttatcg
     2821 ggcaaaatga agccgttgat gcggtggcaa atgcgattcg ccgtagccgt gccggacttt
     2881 ccgatccgaa taaaccgatt ggttcattcc tattcttagg accgaccggc gtgggtaaaa
     2941 ccgagttaag caaaacctta gctaatttct tgtttgacga tcctgatgct atggtgcgaa
     3001 ttgatatgtc tgaatttatg gaaaaacaca gcgtatcccg cttagtgggc gcacctccgg
     3061 gctatgtcgg ctacgaagaa ggcggctatt tgaccgaagc ggttcgccgc catccatatt
     3121 cggtagtgtt acttgatgaa gtggaaaaag ctcaccctga tgtgtttaac attttattgc
     3181 aagtgttaga tgacgggcgt ttaaccgacg ggcaaggcag aacagtcgat ttccgcaata
     3241 cggtagtgat tatgacctca aacttaggct cgcatttaat tcgagaaaat gcgtataaag
     3301 gctatgatgt ggttaaagaa atggtgatgg aagtcgtcgg acagcacttc cgccctgaat
     3361 ttatcaaccg tattgatgaa acggtgatgt tccactcact tggtcaagag catatccgtt
     3421 cgattgcgaa gattcagcta caacgcttaa tccaacgctt ggcagaacga ggctatgagg
     3481 tgacagtaac cgatgcagca ttagatcata tcggcaaggc tggtttcgat ccgctgttcg
     3541 gagcaagacc actgaaacgt gcgattcaac aagagcttga aaatccgctt gctcaacaga
     3601 tcttaagcgg taaattatta ccgaataaag ccgttacggt ggattaccaa aacgggcaga
     3661 ttgttgcaac acaataatgt ctccgatggt gcgagcgtcc tcgctcgtac cttacaagcg
     3721 gtggatttat cgtaaaaatt tgcaaaaaat tgctcgaaaa taaccgcttg cacagtaaaa
     3781 attttcatat tgcccttcat taattttcat aagctaatga agggcttttt attactcttt
     3841 ttgctatcat taacggcgtt tataaccaat acaattacaa ggagtaattt atgagccaat
     3901 tatttccgga agcaacaatc cgcactcaag ccccgtatcg taatgatatt gtaggcagct
     3961 ttctacgtac cgatgcgtta aaaaaagcca gagaagattt caatcagcaa aaaatcaccc
     4021 gtgacgaatt gcgtgaagtc acacgccaag aggtcaaaaa attagttgag ttgcaaaagc
     4081 aacacggtgt aaaagcagtc tctgacggtg aatttagccg gacttggtgg catttagatt
     4141 tcttagctga acttgatgga atggattggc aagaaaccga agtctttaac gtgaacttta
     4201 ccggtcataa acccaaaggg caaacggtaa aaatcgtggg cgatattgat ttctccgaaa
     4261 gccacccttt tgtggacgct tatcgtcttt taaaagaagc tgccggcgat tacccaacca
     4321 aattcacgat tccggcaccg acaatgttac atattatctg ctgtgtgcgt gcggaagatt
     4381 accaaccgtt accacaatat caagacgaac aaaaactgta cgatgatatt gctaatgctt
     4441 atatcaaagc aatgcacaaa ttctacgata tggggctacg taacttacaa ttagacgaca
     4501 ccagttgggg acaattctgt gccgaagata aacggaaaga gtttgcagcc agaggattta
     4561 atttaactga tttagcggaa aaatatgtcg cattattaaa ccgtattgtt gatgcaaaac
     4621 cggcggatat gtcaattacg atgcacatct gccgtggtaa cttccgttct tcttggttct
     4681 cggaaggcgg ttatggaccg gttgccgaag tattattcgg taaatgccgt gttgacggct
     4741 tcttcttaga atacgatacc gaacgtgcag gcactttcga gccactacgc cacattaaag
     4801 atcaacaagt ggtactaggc ttaattacct ctaaatttgg cgatttagaa gataaaaatg
     4861 tgatcattga gcgtattaaa gaagcggctc aaattgtgcc aatcaatcag ctatgcttat
     4921 caccacaatg cggctttgcc tccaccgaag aaggcaatat tttaaccgaa gccgcacaat
     4981 gggcgaaact aaacttaatt aaagaaattg cggaagaagt ttggggtagc taatcctcta
     5041 taatacaaat agccgagtaa atactcggct attttagttt gttttaacat tacaaccaga
     5101 agagataccc aacagtcgca atcacaaaga tagagataat atttagccag aaaccaactt
     5161 taatcatctc actttgttta atttgccctg taccaaatac aatcgcattc ggtggggtgg
     5221 caaccggcaa cataaaggcg caagatgctc ctagaccaat aattaaggct aatccgaccg
     5281 gtggcatatt taatgcttgt gctatagaga tgaaaatcgg cactaacaaa gccgcactgg
     5341 ctgtgttaga ggtaacctca gttaggaaaa taataaatgc tgccacaatt aaaccaatta
     5401 ggtaaaaatg ccccccttca attagtgaga cgaccccatc agccataatt ttgctcgcac
     5461 cagtttgtcc taatacagca cttaacgtca aaccaccacc aaataggaat aatacccccc
     5521 actcggtgtt ttcttgaatc tgttgccaat ttgcgacacg agtaatgcaa ataagtgctg
     5581 cggcaatcaa tgcaagaatg gtgtcaaagc tcgcaatttt gccattaatt cccagaaatg
     5641 cagaaataat agggttaatt ttatcaccaa aaatccaacc aagcgcaata aagacgaaaa
     5701 tagccaaggt gataatacga gaacgattta attcaatttt ctcaaatgat cgatcaaaac
     5761 taactgaaaa atttggttta aatacgatat atagtgttgc aatcattaat gggaataaaa
     5821 ttagcataat tggcaaacca tattttaacc aatcagcaaa agtcagattc aattgagaag
     5881 caacaatcgc attcggtggg cttcccacta aagtacccat tccaccaata ctggcactat
     5941 aagcaattcc taataacacg aaaagataag tattatggtt ttgtttctga tcaagtttac
     6001 ttaaaatccc cattgccaaa ggtaacatca ttgcagctgt agctgtatta ctcatccaca
     6061 ttgacaaaaa cgctgttacc gcaaataaat aaataactgc aatcgataat ttacctttag
     6121 ctaatgccat aattttattg gcaatcatac gatctagctg ctgaatgtgt aatgctgtcg
     6181 ctaaggcaaa gcctccaaaa aataagaaaa tcgttggatc agcaaaagca acaagagctt
     6241 cttttgattt aaccagcccc agtgctacag ccaaaatcgg aattaataat gccgtaaccg
     6301 taacgtgtaa tgcttctgtt agccataaga cggcaatgaa aattaacaat gccaacccct
     6361 tattggcttc aggggtaaaa ggcaaggtat ttaacaaaat aataaataaa atagcatctg
     6421 caacaaaaat caagctattg cgtgtatttt tactcggttc aataagagga gtattttcca
     6481 taaaaacctc acaaaatata gataatcagt ggtatcacta tatataaaaa aacgatatag
     6541 gcaaatataa ttgttgcaaa agtgtgaagc tcatcaaaaa atttaacact aaaaaataaa
     6601 ttgcttaaag atacagcacc tttgcaaaaa taaatcaaaa ttacaccgct tgtagcgaaa
     6661 ggtattcaat ctctaaccca aatagtgatt ttgccaatgc ttgagtcatt gcataactac
     6721 tgagagagcc tttcgcctca gccagcacaa ctcgagtaac gggaatatcg gcaagcccta
     6781 aaaataatcg atagttcaac gcgctttgca acggtaaaaa agtaggatta aaagctgcat
     6841 tctcagtata tttaccacaa acaatacgct cacctacttg cagtgcaacc ccactaaatg
     6901 cgttgctgta aggggcataa gcattattgg cagcaaaaat tgccgcttgt tgtaaatgat
     6961 cgcccttaac ctcaaattgt tgcggttgtt catcaaataa gactttctca atccctaaat
     7021 ctttcggtcc aaaactatcc ggcaaatagc tatggagcaa attattttgg ctatgcggta
     7081 aatgtacttt taagcttgcc gcactgttta attcattcat aaattggcgg caatgcccac
     7141 aaggggtata gttcacaacc acatctgtta tcaaagtttc ccctgctaaa aatgcgtgcg
     7201 agattgcact ttgctctgcg tgaacggatt gttgcataca ttccccggaa aactcttggt
     7261 ttgccccaaa atagaaatct ccgtttttgc caatcgcaac cgcccctaca ttaaaatcgg
     7321 aaactggtgt aaccgcataa caggcagcaa tggcaatgca atataaagcc aactcaacac
     7381 gagagcgttt aaatttttca cagagttcat caaccacttc gtaagagagc tgcccgtgaa
     7441 aatcttgctt gataagttgc tcaataatag cttgtgtaac ttcacagttt ttcgctgctt
     7501 ttaattgttc aaaacgctct gtaatgtctg ttcgaaacat actgtacctc cgtttaatgt
     7561 tttttatagc tgcaaatcag tatccctgcc gtaatcagta tggcactaat aatatggtaa
     7621 gtatgaactg attcatttaa taaaataata ctgaacattg ctgcaaagag cggcgtaaaa
     7681 ttagtcatta ccgctccttt agcagaaccg actattgcaa tgccgaaatt ccaaaacgca
     7741 taagagagaa tagaagggcc gataaccaaa tagcctatcc cactccattg taaagcggtc
     7801 aaatttgcta aattttttgc agattctgct acatattcat agataaaaaa tggcgttaac
     7861 gttagaactg ccagccccac taatacggtc aaaaacaccg tattgcttat accttgtgga
     7921 cgtagccgaa tcacacaaca ataaaccgcc cagcttatag tagaagcaat cgcccataaa
     7981 tcaccttgat taattgccaa gctgaataag cgagttagct tcccttgcat caatagccac
     8041 agcactccca gcaaactgat tattgcccca cttagaataa tcgggctgat tttctcctta
     8101 aaaacgagcc gatttaaaaa tagcaccaat acaggcgaaa tagctaaata gagactcgca
     8161 ttcaatgctg ttgtcgtttt taaaccttca tataaggtag ccgggaataa aattacccca
     8221 agcagaccta atacccacat cacacctaaa cgaggtttta ataagtgcat tacccgccaa
     8281 gttgggcgaa aaaagagcaa aactaaaatt aaaaaagccg gcaaccaacg caaataggtt
     8341 aaggtaatag gctgaactgc cccacttaac actttgccta atacaaaatt cccaccccaa
     8401 aaaagagtag caacgattaa actgaaatac cccaatttca gtgatgatga gatcattgat
     8461 gacctcgttc tacaatcaca cctacactgc ttgcttgggc aaccgctttc ggcttatgca
     8521 gttcaatccg aatccaagaa agttgatact ctttttgtaa tagttccgcc agttgatagg
     8581 caacagtttc aactaatttg aaaggttgag attcaacaaa atccagcact ttttgcgata
     8641 cttccgcata attcaagcaa tattgtacat catcggtttc tgccgctttg gaaaaatccc
     8701 acgccatatc aatgttaaaa accaagcgtt gcttaatcgt atgctcccaa ttgtaagccc
     8761 caatggaagc aaaagcggtt agttctcgaa taaaaacctt atcactcatt tttcgtcctg
     8821 ttttattttc tgaatttctg taaaatatag cacaagataa atttaatcag gaaaatttat
     8881 gaatttaatt ccctatttat tgatcttaac cgcctatttg ctcggctcga tttccagtgc
     8941 ggtcattttt tgtaagctgg caggcttgcc tgacccaaga gaagtcggct cacacaatgc
     9001 cggtgcaacg aacgtactac gaattggcgg taaaagtgcc gcattaggtg tgcttttatt
     9061 cgatatttta aaaggcacat taccggtggc gatggggatt tattttgaac tctctccctc
     9121 acaactcggt ttcatcgcct tagcggtttg tcttgggcat attttcccga ttttcttcca
     9181 attccgtggc ggaaaaggcg ttgccaccgc atttggtgca atctccgcat taagctttat
     9241 tgttgcaggc ggtgctatcg gcacttggct actggtgttt ttaatctccg gctattcttc
     9301 tttaagtgcc gtcttcactg ccttggtcgt accgttttac atttggtggt tcgagccaca
     9361 atttactttc cccgtcgcct tagtttgttg cctattggtt taccgccatc acgataatat
     9421 tcaacgctta tggcgtgggc aggaagacaa actgtgggat aaattcaaga aaaatagagc
     9481 ataaaaatag gcatagtgaa ccgttcgcta tgcctatttg caaattattg cggaaaaatc
     9541 accgcttgtc ttctcgacta aaccgctaaa tctgcttcat ctcctcgatt ttgtagccat
     9601 tgtttacgat cttccgctcg ttttttaccc aatagcatat ccataatttc aaaggtattc
     9661 aattcgccct cttctaccgt gtcatcaaag gttaattgta ctaagcggcg agtgcttggc
     9721 tccatcgtag tttcacgcaa ctggctcggg ttcatttcgc ctaagccttt aaagcgttgc
     9781 acatttggct ttcctttttt cttggcaagg cgagctaaaa tcgcctcttt ttccgcctca
     9841 tctaaggcat aatgcacctc atctttgccg atatcaatgc gataaagtgg tggcattgcc
     9901 acataaacgt gtccgttttg caccaatttc gggaaatgac gaaggaataa cgcacacagc
     9961 aaggtggcaa tatgcaaacc gtctgaatcc gcatcggcaa gaatacaaac tttgccataa
    10021 cgcaactctt ctaaattatc gctatcaggg tcaattccca aggctaccgc aatatcgtgt
    10081 acttcttgtg aagccaatac ttggtctgat gaaacctccc aagtgtttaa aatcttacca
    10141 cgcagtggca aaatggcttg atactcttta tctcgagctt gttttgccga accgccggca
    10201 gaatcacctt ctaccaagaa aagttcggta cggctgagat cttgagctgt acaatccgcc
    10261 agtttgcccg gtaaagccgg accactcacc aatttcttac gcaccacttt tttcgccgca
    10321 cgcatacggc tctgggcgga actaattgcc atttcagcaa ttaatttacc tgtctgcaca
    10381 ttttggttaa gccataaact aaaggcatct ttcaaggtgc tatccacata gcttgaggct
    10441 tgacgggaag acaaacgctc tttggtctgc cctgcaaatt gtggctcttg aattttcaga
    10501 gaaagcacat aagcacaacg gttccacaca tcatcagcgg ttaattttac ccctttcggc
    10561 aataaattat ggatttcgca aaactccacc atcgccttta ataaaccgtt acgcaagcca
    10621 ttaacgtgcg tgccgccttg tgcggtcgga atcaggttca catagctttc cgctactaac
    10681 tcgccccctt ccggcaacca agttaatgcc cagcttaccg cctctgtttc agcagtaaca
    10741 tcaccaataa acggtggatt cggcacggtt tcataaccgt ttaatgcctc gctcaaataa
    10801 tcagataagc cgtcttcgta ataccaactt tcttcggtat tgttgatttt atcaataaaa
    10861 ttgatggtga gtttcgggca aagcaccgct ttggctcgta acaaatggcg taaacgactc
    10921 accgaaaaac gagggctatc aaaatatttt gggttcgggt aaaaacgcac tgtcgtgccg
    10981 gtctgttttt tcgggcaagt accaattacc gtcagatctt ccacttttac cccgttggca
    11041 aaggcaatcg aatagacttc tccgccacgt ttaatctgaa tttcaacccg ttcggacagg
    11101 gcatttacca ccgaaatccc caccccgtgc aaaccaccgg aaaacgtata gtttttattg
    11161 gaaaatttac cgccggcgtg caatttcgtt aagataagct ccacccctga aattttctcg
    11221 gtggaatgaa tatcgaccgg cattccccgc ccgttatcca ccacttccaa cgaattatca
    11281 gcatgaagaa tcacatcaat tttatctgca aagccggaca acgcctcatc gacactatta
    11341 tcaatcacct cctgccccaa atggtttgga cgtgtggtat ccgtgtacat tcccgggcga
    11401 agctgcaccg gctcgaggtc tttcagaacg gtaatttcat ccgccccata gcgtttttca
    11461 gacattatgc tttctcttag gcttaaaata aaataaggct gaattttaag gaatattcag
    11521 ctattttgca aaattttggt gaaaaatgac ctgttgttat gcaataaaaa ctatttttgc
    11581 gatctacatc gaaaaaatga gttttaattt ccctatttgc ttattcattc agtatcttaa
    11641 tctcactttt tattttaaaa tggtactata ttatggtagt aaaaatccta aagcggaaat
    11701 ctcaaaagac actacaacaa atctacaccc agcctatttc tgccaatatt aaatggacaa
    11761 atatagaagc tctttttcta gagttaggag cagaaataga agaacgagaa gggagcagaa
    11821 ttgcagttgt tttatttcaa caggtcagag tatttcatcg cccacacccg aatcctgata
    11881 cagataaggg gcggtagcga gtattaaaaa atggttatct gaaaacggag tcattcctta
    11941 tgcgtaatat tatggatatt aatggttata aagctgtcat tgcttacgat cccgaaacag
    12001 aattatttcg aggtgaattt atcggattaa atggtggagc cgatttttat gccgataatg
    12061 tcattcaatt aaaaaaagaa ggtgaactaa gtttgaatat ctttttagaa ctttgtagag
    12121 aaaaaggtat tgagccgttc aaacaatatt ccggaaagtt taatgttcgc ctttcgcctg
    12181 aattacataa agctgcggta attgcagcaa ctgctgaaaa tttaagctta aatgaatgga
    12241 ttaaccaaac gttagaaaag agcgtgtagc ctaattgcaa aacaatcacc tattttgacc
    12301 gcttgtatta cccgtttaac ccattcaata tcgaacactc cgaattggcg ttgccacagc
    12361 aagagctact ccagcttttg agcaaagtca gcatttggtt taaatcggca attttttgtt
    12421 caagctcacc gatatgctgt tcggttaatt gttttacatc tcggcttgag cggtttgggt
    12481 tgtcgtttaa tttaagtagt tcgctgattt gagccagcga aaagcccact tttcgggcat
    12541 tgctgataaa atgtaatcgg ctcaaatcag tagcattgta gaatcgatac cccgcttcgg
    12601 tgcgacttgt cggcggcaga agtcctgctt tttcataatc tcggatttgt ttggcggaaa
    12661 gcccggtttt ttctgcggct tggctaatat tcattataat cctctcactt taatcgcttg
    12721 accttaacct aaggttaagc tttattatac gcctgaataa tcactcaaaa caggagaaaa
    12781 tgatgacaat taccctacaa cttgatggct tacattgtgg caactgtgtg aaaagtgtcg
    12841 aaaaagcgtt aaatggcgtg gctggggtga accaagttag cgtaacgtta gaaccgcaaa
    12901 ttgctgtggt ggaaggctca gcagaagcac aagccttaat tgaagcggtt gaagacattg
    12961 gctttgacgc aaaattagcc taattaataa ggggcagaaa ttttgcccta atctgcccaa
    13021 tatttcggag gataaatgac aagcacagct cactattcgc cagaacaaca acttttgatt
    13081 gatggaatgc actgtgccgc ctgtgttcgg cgagtggaaa aagccttact taaagtggaa
    13141 aaggtggaat ttgcctcagt caatcttgcc gatcaaaccg cttttgtgca aggcaacgcc
    13201 aaccctgaag ccttggtagc agcggtagtt aaaatcggtt ttggggcaga agtgctggaa
    13261 agcgaggaag aacgccgaat taaacaacaa gcccaaacgc aacgagtgtt agggcataaa
    13321 cgcactcaat ttatgcttgc ccttgtagtt ggttttgcct tagttgcttt tgggttctac
    13381 aaaggaatga cggtaaacga aaccaatcgt tcgctttggc tcagctgggc aggtattagc
    13441 cttgcgacaa tgtatttttc aggtaaagat ttctttcttg gggcattttc agcactgaaa
    13501 aaccgctcag ccaatatgga catgttagta gcaatcagca ccggcacggc ttggctctat
    13561 tcttgttggc tcacgctttt cccacaaccg aatgctcacg tttattttga agccagcgtg
    13621 atgattctcg gctttatcaa tctaggaaaa tacttagaac tgaaagccaa acagcgttcc
    13681 tcgctagcat tggaaaaatt gctggatctc gccccaaaac aagcggtcat ttttgaagaa
    13741 aatattgcaa aaaccattcc ggctaaagca attaagccac aaatgcgggt gcaagcctta
    13801 accggtgacc gcttggcggt tgatggtatt ttagacagtg gctctatttg ggttgatgaa
    13861 tcaatgctca ccggtgaagc cctacctgta gagaaaaaaa tcggtgataa agtgcgagcc
    13921 ggcactctgg tgcaagacgg ttcaggcact tacattgccg aacaggtcgg ctcacaaacc
    13981 gctttggctc gtgtaatcaa tgccgttcgc cacgcccaaa gcagcaaacc gccattggca
    14041 cagtttgtag ataaaatcgc cgctgttttt gtgccggtgg tggtttcaat cgcattactt
    14101 tctgcgttaa tttggctggc agttgggcag gattttgcct ttgcactctc gatttttact
    14161 accgtgttga tcatcgcttg cccttgtgca ttggggctgg caattccgct ttctaccatt
    14221 gccggcgtgg cacgttctgc cgaatttggc gtgctggtgc gaaatattga ggcactacaa
    14281 gcaagcagtg aaatcgacac cctagtgttc gataaaaccg gcacactcac cactggcaga
    14341 atggaagtgt cggatgttct cacctttaac ggatttgagc aaaagcgctt gctacaactt
    14401 gctaaaagtg tagagcaaca cgcctcacac ccgattgcga aagcgattgc aaaatttgcc
    14461 gaaaatcaga ccgcttgtgg tgtaaccgat gtgcaagtgt tgaaagggtt aggcatttca
    14521 gcaaaatatg aaggcagtac aatcagaatg ggaaattggc aatttgtagg cgaaaccatt
    14581 caagcaaatc ttgcctccct attgcccgct aaagaggggg atttttcctc aaaaattttt
    14641 gtttcggtgg ataatcaact cgccggtgta ttgtcggttt cagaccaact tcgccctgaa
    14701 gcgaaagcaa ccattcatca attccaagcg gaaggctatc aatgcgtgat gctgaccggt
    14761 gatcgccaac aaactgccga ctatttcgcc aacgcattgg ggttagacgg cgtgattgcg
    14821 gaggtattac cggagcaaaa agcggaaaaa attcgagcct tgcaagcaga gggtaaaaaa
    14881 gtagcaatga ttggcgacgg cataaacgat gctccagctc tggctcaagc caatgtgggc
    14941 attgcgatgc acaatggttc agatattgca gtggaaaccg ccgatctttc gctgatgcga
    15001 gaagggctag caccactgat gcaaattcta ccgttctcta aaaaagtgct gaaaaatatg
    15061 aagcaaagtt tgctcggggc ttttatctat aatgttattg cgattcctat tgctgccggc
    15121 gtgctttacc ctttcaccgg ctggctactc aacccaatga ttgccgccat tgcgatgaca
    15181 ttgtcgtcaa ttaccgtggt gttaaatagt caaaggttgt tgaaataatt taagcggtca
    15241 aatttgcata tttttttgca aatttgaccg cttgtaatca ctaatccgcc aaaaacagcg
    15301 gcccaagagg tgttttcgga atgccaaaat gctcagggta atgcacctcg accaaatata
    15361 gcccctcggc tttcgctgta ggggcagctt tttcccggtc acgttgctcc aacacccatt
    15421 ttgcccattc cacaggctgt ctgccttgcc cgatttcgag caatgttccc acaatattgc
    15481 gaaccatatg atgtacaaag gcgttggctt gaatatcaac aatcacataa ttgccttgcc
    15541 gagacacatt taaatgatga atattccgcc acggcgtatt agattggcat ttggcggcac
    15601 ggaaagagga aaagtcattc tcgcccagca aatactgccc tgcttggtgc attttgcgtt
    15661 catcaagggg aaagtgaaag tgggtaacac ctttaggtaa aattgccgac cgcagttttt
    15721 ggttaaaaat aatatagcgg taacggcggg cggtggcact aaaacgggcg tgaaaatcct
    15781 cattcaccgc taccgcccat ttcaccgcaa tatcatcggg taaatgagcg ttagtgccga
    15841 aacaccagct ttgtagcggg cggtttgctt gcgtttcaaa atgcacgacc tgccctgtgc
    15901 cgtgcacacc ggcatcggtt ctgccggcac aaaacacttc tacgggcgaa ttggcaacaa
    15961 ccgacaacgc ctgctctagc tgttgttgta cactctctac cgcttcttgt cgttgccagc
    16021 caaaataacg gctgccgtca tattcaatac ctaatgcgat tttcatttta ataccttgat
    16081 aaaaagaggg gcgaaaaatt tttcgccccc acagtaattg atatttgcaa ttatttattc
    16141 aataagccta aaaattcttt gcgggtttct cggtcttcta agaaaacacc gccaaaggca
    16201 gaagtaactg tatagctatt ggtgtctttt atgccacggc atttcacgca aaaatgggtg
    16261 gctttcacat acaccgcaac atcgtctgtt tctaaaatag tttgaaaggc agttaaaatc
    16321 tgttcggtaa aacgctcttg cacctgcgga cgttgggcaa aaaactgcac gacacggttg
    16381 attttcgaga gtccaatcac ccattttttc gggtaatagg ctaccgctac tttgccgtca
    16441 atagtaacaa aatgatgctc acaggtagaa gttaaagtaa tatcgtccac cagcaccatt
    16501 tcactgactt tcattcggtt ttcaatattg gtaattttcg ggaaggtagc ataatcaagc
    16561 ccgctgaaaa tttcatcaac atacattttc gccaaacgat gaggcgtttc ttctaagctg
    16621 tcatcactta aatctaaacc gagcaattct aaaactgcct gcatatgctg ctggatttct
    16681 gctcggcgac tggctttatc tttggtatga gtaacagtcg gagtttcaat gccttttgcc
    16741 aacaaggctt ggcgaacttt ttgagcctcc ggcgaaagcg tgttttctgt gatagttaat
    16801 tcgggcgaga tcgttgtcat tggttttcct ctcaaatgta agctgaagat tctaacaaat
    16861 tgacatcaaa aaaaatagct ctaaaatgag ctatttcagc cataaacacc ctctttattt
    16921 atgcaaaata tacagtatct ctttaatgcc gacctgattc ccgaacatca agctgaattt
    16981 gtgcagtctc tcttaacttg caaaaatttt gacaattccg accgcttgct aggcttctca
    17041 aaagggcgag gtacgacttg gtttttagat acctctgctg aactaggtat caatgtggtg
    17101 cttcgccatt attatcgtgg cggcttgttc ggtaaaatca tcaaagatag ttactttttt
    17161 actcgctttg aggccacccg agcgtataaa gaatttttct tactgcaaca aatgttagct
    17221 tggggtttac ctgtgcctcg ccctgtggcg attaaaatag aaagacattt ttgttgctat
    17281 cgtgccgaca ttatgctcga aaagctagaa aacacacaag atttaagcaa aatcttgcaa
    17341 tcccattctt tatcgaacga acaatatgag cagataggga aactgattcg cagtctgcat
    17401 aaccatcaaa ttcaccattc cgacttaaat atccataata ttttgcttgg taatgatggc
    17461 aaattttgtc tgattgattt tgataaatgc ggcattgagc cgggcgaaaa ttggaagcaa
    17521 aataacctag accgcctgtt acgctcgttt aagaaagaac aagggcgatt aaatattttc
    17581 ttcagcgaag aaaattggca ggctgttttg agaggatata ctctctaaga aacaataatg
    17641 gcacaagctt agaaacttgt gccatcaaat catcaatatt aactacttca cttcacgaat
    17701 cataatttca gacggaatca cactgccttg ccagtaaagt tcagaagcta ctttttccgc
    17761 taatgcgagg taggcttggc tgatttcgtg ttccggagct gccaccaccg ttggcacacc
    17821 gctatctaaa tcttcacgca gacgaatatg tagtggtaat tgtgctaaca ctttagtgcc
    17881 atatttttgg gcgatttttt ccgctccgcc ggtgccgaaa attgcctcat ggtgtccgca
    17941 gtttgagcag atatgcattg acatattttc aatcacccca agcactggta ctgagacttt
    18001 ctcaaacatt gagatccctt taatcgcatc taataaggca atatcttgtg gggttgttac
    18061 taccaccgca ccggtcaccg gaatttgctg tgaaagcgta agctgaatat cacccgtacc
    18121 cggtggcata tcaatgacca agtaatccaa ttcattccac caagtttcat ttaaaagctg
    18181 acttaacgca ctgcttgcca tcgggccacg ccaaatggtg gcgttatctt cttccattaa
    18241 atagccgata gaattagatt gcaagccgtg agcggtaatc ggcgtgatgt gcttgttatc
    18301 aggagaagtt ggacgttggt cttttgctcc caacatatgc ggaatagatg ggccgtaaat
    18361 atccgcatct aaaatcccca ctcttgtccc ttgtgctcgt aaggctaaag caagattaac
    18421 tgaggtcgtt gatttcccta ccccaccttt tcctgaagtg accgcaatga tattttttac
    18481 cccattgact gccgggtgtt tattcgcccg ttttaaggtc gcaatttggt aatttaatac
    18541 ccattttaca ccgcttgaac ctgttacttg ctttaattta gcctctgttt cggcttttaa
    18601 ggtttcaaaa ccactgttcc acgcaaatgg catcgtgatt tcaattctaa gaatatcgcc
    18661 ccctaattct gcttttttaa acgcattaag ggcaattaaa tctttctgta aagtcgggtg
    18721 ggaaaattgt tgcaagattg ctttaatttc aacaagttgc tgttcattta attggttcat
    18781 tggttatcct tgtttgctaa attgcgtttt aaatctttgc tataaattac ttcgctatcg
    18841 ttattcaaat caatacccaa aagggaggaa acaatcccaa cccgatgatg gtattgaaat
    18901 aatggcaata cggcaacatc gctataaagc tgctcgctaa tttcttgaat aagtgactct
    18961 ctcgcttctg cactaagcgt ttctgtttgt aaacgattta atttttgatc gactatctca
    19021 cttttatagc cggaatgatt atccgggctc attgaatgaa acttctgcaa aaatacaatc
    19081 ggatcaggat aatctgcaca ccagcctgct cgtgctatct ggtaatcttt ttgttccctt
    19141 actttattta aagtctgcca atcaaccatt ttaggtgtaa tattaaataa ttctgattga
    19201 gaaagggctc gagtaacttg gttagcaata ttaatgctat tctcatcata taacaaagtc
    19261 agctttaaag gattataagg gctaattcct gcttttgtta atagctgctc aaccacaaca
    19321 ggattccaac gcttttctct atcttttact aagctatgtg gaattacaga ctgactcgga
    19381 accccatatt cttgcccact atttgctgaa gccaccattg tccttattgc ttcacgaatc
    19441 tctcgtttag ctaataatgg atcatcaaaa ttgaactcat agtaataaga gcacaaacgc
    19501 ggaaatttca cgatattcgt ttttttattt aataaaggat tctcgacaat atcaaaagca
    19561 gagcagtttt ggatagttgt aattaaatca tactctatag tttgaaaggg aatttcttgg
    19621 gttcgagcct ttaacaccat tttttgagca tctagtttct cgagacggta agacgcattg
    19681 ctcacgaagt tatctatggt tggagcaatc ccttgataag taggtaataa tgcggaatgt
    19741 gccagcattt caggcaattg gtgatttggg tgatttagcc gaattctcaa tgtatgcgca
    19801 tttaatgcct ctacaccgag ttcttcaact gactttattt gctcttcaat cgcttttgca
    19861 ttttctatac ccatatagat gagatattta gacaatacag aatgattttg aggatctatt
    19921 aaacgtcgcc agcttgctac aaaatcttgt gcagtcacag gttggccatt agaccacaca
    19981 gctttctcat ctaaaataaa caaccactct ttttcatctt cagtaaacca attctgagca
    20041 atggccggaa cgacatcacc ttttctgttg taggccgtta aaccgactaa tagatctctt
    20101 aaaggagcag catctgcaga agctttaatt ttatgtgggt cgagttgaaa tacagcagaa
    20161 taaattgcac gtttgagtaa agtatcactc tgccggtttt ctacccagac agattgaatg
    20221 gattgagggc aaattaattg atcacaagat gtaataagca gaatgcaagc ggtaactttt
    20281 gcaatttttt ttacaaatgt aaccgcttgt aaggatttca acataaactc cccaaaggtt
    20341 aattaagatt tattttacaa gaagcacagg aaataaagtt gtaattcctg ccacaataat
    20401 ttcaattccc agcgccatta aaatcagccc catgatacga gtaacgacat tagatcctgt
    20461 tttgcctaat tttttcacca aaggggctga atagcggaat aaaatataac aaattaatgc
    20521 aaatacaata atcgcaatgc taaagccaac atagtcttcc caagtatggt agcgggttcc
    20581 ccacacaatg gttgagccaa ttgcccctgg tcctgccata atcggcattg ctaatggcac
    20641 gacaccgata ttttcgtatt cagtaatatc ttcatttttc tcttctttat tttgtttgtg
    20701 ttcacctaat ttaccgctaa tcatcgtcat cgcaatgctt acaatcaaaa tgccaccagc
    20761 tactctaaaa gagctaagtg aaatgctaaa cgcattgaga atcagattac caaaatagag
    20821 gctgactaat aaaattactc caatagaaac agcggtgatt aagctggtgc gatttctttc
    20881 cccctcatat tggtgagcgg tcatactgaa aaaaataggc aaggaaccaa aaggattgac
    20941 tatagcaaat agaccaatga agaattggag gtagatggca aaattaataa tgatatccac
    21001 aaaaactttc tcaaacaaca gtgtttcggg cgctattata tcggttaatc aaggtagata
    21061 caaaccaaaa gcacccagcc taaaggacgg ttgggtgctt tttgataaaa tgaaaggctt
    21121 gttagtgtga cgaacgttgc tgcataaaat cttcatttac ctcaattgaa gcttttgcac
    21181 gtagcgattg taagaattca ttacgtaaaa ttaaacgatt agcttgttca aattgtggcg
    21241 ccaatgtctt aaactgttca gcattccctt ccgtaatgtt atctaaggca acaataacta
    21301 catcgccctt ttgattacgt gccatttgat aagtcgtttt atcttgcgcc tttttcattg
    21361 cgaaaatcgt tccagccaat accgggtttt ctacttctgc ttgcatataa actaaagttt
    21421 gtggcgcatt aaatttcacg tccactgatt tcccttcatt caaggctttt acattttctt
    21481 ctactttcgc cagcaacgct ttttccgctt tttctgcctt cacaaaattt tcaactgctg
    21541 cttttgcttc atcaaaagtt tgtggacgtt ctgcatcata atcactcact ctcacaaaca
    21601 atgtctgtgg atttgcatca ttcccaacat ctaaagcatc agaattttgt ttattttggc
    21661 gtagctctcc ttcaaacaaa acttttaata ctttctcatt ttgtaaagca gtaggtacgt
    21721 tttcacgggt aaacagatcc gttttttgca gttccacatt accggctttc gcaacttctt
    21781 caagtgaaga attattctca aaggctttat ttgccatttc gcgcgcaact gtaaaatact
    21841 cagttaacac taattcttgg cgaatagttt gggcaatttt atctttcact tgtgctaact
    21901 caatcacttg ctcaggttta cgctccaata ctttgatgat atggtaagca ttatccactt
    21961 tcaccgctgc actcatctgg ccggcagtta aatttgctac agcatcttca aaagctttcg
    22021 ggaaagtgcc agcttttgcc caacctagat caccaccatt atttgctgat aaagtatcgc
    22081 tagatttgtt ttttgccaaa gtagcaaaat cttccccatt tttgagcgct tgctcaatag
    22141 cctgtgcttc cgcttcacta gcgacttgaa tatgagctaa atgggcttca cctttagtta
    22201 cataatcggc tttattgcga tcatagtaag tttgaatttg ctcattggta atctcaactt
    22261 tgctttccac atcttttgga gaaagagtaa cgtactcaac cgctaatttt tcaggtgcta
    22321 ataatttagt tttatttgct tcgtaatagg ctcgcaattc ttgctcggaa gcggtctgat
    22381 tttccatttc ttttgcaact gaaaattcgg ctaaacgcac ttcacgttgt tgcaacagta
    22441 attttgctaa caatgcctgc tgtgccggta cattaaaatc actattgata atcccctctt
    22501 gtagctggga ttgcaacata ccttcctgca caatcgctgc atagccatcg gcacttaaat
    22561 tattgtggcg taatgtttgt tggtataact cgttactgaa tttaccatct tgttgaaaca
    22621 tctggctgtt tacaatttca gatttgattt gatcagcact aatacctagt tttaactctt
    22681 ttgcatactg gcgcagaagc tcttcatcaa ttaatccatt taataccgat tgattaaatt
    22741 gagcagcata ctccgggcta tccattaaat cccaaaagcg actccccagt tcagcattta
    22801 atctattttg ctcacgatta agcgtgttat taaataattg ctgactaatt tcttccccat
    22861 ttactttcgc tacagaatta tcttgtgaaa tcaatcctgt cccaattcca ccgattacaa
    22921 atgaaataga gactaatgca aaaataattt taaagaccgg cccatttgtc cgctcgtgca
    22981 ttttttcaat catttaaaaa ttcctaaatt actcaaaaat tgtcgctgat tatactcttt
    23041 ctcaaatgag aaataaactt gcaaattttt attgaaattt aaccgctttc tctttaaaat
    23101 tcacagtccc tgtcgtagct gagttagaga tcggctattg atgtattatc aacccttaac
    23161 aaaaggaaat taaaatgtct ctaagcgtag aagcaaaagc aaaaatcgtt gctgaatttg
    23221 gtcgtgatgc aaaagacact ggttcttctg aagttcaaat tgcattatta actgcacaaa
    23281 tcaaccactt acaagcacac tttgctgagc ataaaaaaga tcaccacggt cgtcgtggtt
    23341 tattacgtat ggtttcacgc cgtcgtaaat tattagacta cttaaaacgt actgatcttg
    23401 ctaaatattc ggaaactatc gcacgtttag gtttacgtcg ctaatttcaa atattagata
    23461 tgagagccga gctgaaaagt tcggcttttt tataaatttt attcgaggaa aaaatatggc
    23521 ttttgcgtca ttatttacat tattagacga tattgctgcc gtgcttgatg atgtatcgat
    23581 catgactaaa gtggctgcta agaaaacagc aggcgtaatc ggtgatgatc ttgccttaaa
    23641 tgctaatcaa gtcagtggaa agaatgtggt gccagaacga gaactaccga ttgtttgggc
    23701 tgtagcgaaa ggctcattaa tcaataaagt gatcttgatt ccactagcgt tgctgctatc
    23761 ggtcttttta ccgcaggcta ttatcccgct attaatgata ggcggtgcat atttatgttt
    23821 tgaaggcgta gagaaattac tccatcgtct attacataaa aacaatcaag ctcattctga
    23881 tgaaaccgaa accctttctg aaaaagataa aattaaaggt gcaattcgca ccgattttat
    23941 tctatcagca gagattatca ttattgcgtt aggtgttttg caagactctt caaccctaac
    24001 ccaaatttta tctctctccg ctatcggggt cggaattacc ctgtttgttt atggcttagt
    24061 tggattaatt gtaaaactag atgatatcgg tttatggtta atgcagaaaa aaagcacatt
    24121 ctcacaagcg gttggaaaag gcttattatt tgcaatgccg tggtttatga aaggactttc
    24181 tgtgattggt actattgcga tgttcttagt cggtggtggt atttttaccc ataatttacc
    24241 aatgattcat cacttcgtag aacaattcgg tatctctccc catttttcta ctctggttga
    24301 ttttgcagtg ggtattgtgg ttggtattat tgcatgctta attattttac ctttgatgaa
    24361 attattttct aaaaaggcgc actaatcccc aaaagcgtag ctttggttaa agctagcttt
    24421 ttatctcttg ctataaaaaa atagcaggtt tcaagcctgc tattttttta attattataa
    24481 tgagttagac tcagtggctg tttgcggtaa ggctaatggc tcattaactt tagactgagt
    24541 agccatattc acctgtttga gattttcctc acgaatacgg tttgccatta atgtatcccc
    24601 catctgctct gccacgtgca gtgccataat acgatcatca gcaacacatt catcatgagc
    24661 caataacaat tcaaactgag acttcgcttt ttggtattgc ccatctcgtg tataaatata
    24721 gccaagcgct ctagcataat catcggtata tttaacattc gctttatctg cccgttttgc
    24781 taatactttt agtagcttac tgtcagaatc aatttgtaaa cgggttaatt gcacaaataa
    24841 accttgtaat tgctcatctt caaatttctt caacgtttct aaagcaattt cttgtgcaga
    24901 ttgatgatcg tcactatcaa ttaaacgctt gatgacaccg acacgactat acaccgattt
    24961 acgacgacga tttggttggt tttcccacca agaaagcaag ccttcctgcc cttcttcctg
    25021 taaacgctca tcttgtaaac catcatcaac gaaatactct aactcagcat actcttctgc
    25081 agttaagaaa ttacgttggc cgatttcaac taataatcta tctaacgcaa cataagctct
    25141 ggattcttta taaatttgaa tcgctaagcg taatacctca tcgctatgag gtgcaagctc
    25201 tagtaggcta tcaatcgcag ttcgggcagc cggtaatttt ccttgttgta ataaaattcg
    25261 ggttcgtacc aactccactg caacattatt cggtccagct atttcagttg ccttaattaa
    25321 atatttattt gcagctaaat catcaccatt ttgctgagca gcttccgccg ctttaattaa
    25381 attcagtaca ggctcatctg catgttttgc atttttacta aagagttttt ccgcttttga
    25441 gtaattccct tcactcatac gcattaaacc ttccagtgtt tcttgctgag cttttttatg
    25501 cttacgagtt gagaaccagt tataagctcc attactcata cggcatattt tagtgacaat
    25561 ccattcaagt aaataaacta ccgccattgc caacacaaaa aaaaccacaa gcattacaat
    25621 gctcatttca atcacggtag ttgctgtttc aattctgaca taaccttgat ttccggctaa
    25681 ataaggccca gagattagtc caactaataa taaaagcatc aaaaagagcg ttctaaacat
    25741 aatctattct cctttttatt attgtgctga aagaggcatc gcatcttgct ctgcttttac
    25801 aggctctgct tgctctaatt ctttttcagc ttttatttcg actttctcta ttttttcagg
    25861 ggttttatta agttgctgag caatcacctt taagctttgt aatgaagttg gagcatccac
    25921 ataaatagtt tgttctgcca actcatctag ctctttcaag aaatgttgca cattttcatt
    25981 tgaagtttca aaataacttc ttacccaaga gcctaccgtt tgtaacgatt ttttataaag
    26041 ttcgctttgc tggcgaggaa cagctaaaat cgcaatttgt aaacgcaagc gaatgttttc
    26101 acgcaaataa atttcttgat tcggtgcaac aaaggctttc tcatctgctg cattacgttt
    26161 cgatacacga ataaaatgat ctaaaaatga agcagcactt ttttctaaat ttttctccca
    26221 atccgcaaga gaatcactta cttgcccatc ttgtttgcta tttgaagctt gttcactttc
    26281 caaaatcggc aaatcatcta atttattcgc taaatttgcg acacgctgca ttaaggcatt
    26341 ttgatcgatc tgatgcaatg cggttaatgt atttaaatca gttttgattg cctcacgaat
    26401 gtgaatcgta ttcggtgctt ttgataaaac ttgatctgcc tctaacaata aatttttcgc
    26461 tgtttcaatg tcattatcta acaccacttt acgagccgca ttattcaata ggaaatctgc
    26521 ctcagataat agccagaatg tgttatccga accagaggta ttatttagct tttgcagttg
    26581 aagctgcaaa ctactaattt gctgggtata accattttgg gctgtttcta aagctttaat
    26641 ccgttctaaa gctttttgat attccgtgac caattcggca atttgtgctt tttcattttc
    26701 gaaatttggc atctcaacca tagtttgagt agtaggctga tttgctttag cagatactgc
    26761 ctgaatttga gattcaacct ctgcaaactt tttatttgcc atataatgac cagctccgcc
    26821 aaccgctaaa gccactaata gtgcaactaa tgccaagccc tttccgcccg atttttgaac
    26881 aaccacttgt tcttttggcg ctttttgcat ttctgtttga atatctttct ctatagcttc
    26941 gttcactaca tcttcctcaa tctctttttt tgcaaaagat cccgctgaat cgaccgcttg
    27001 ttgtgcctct tctaccacct tttcagctga atgctctaaa tgttcagtta cttttttaga
    27061 tcttgacata ctcgccacct ctagttagat ttgcccactt taaataataa tgtattcatc
    27121 aaagttacat tatcggcttt atccgatacc ctaatcttat cttcttgcca gcccatttgt
    27181 ttagctatct ttgcaatccg ccggctcact acaaccagat cacattcaaa taaccatgct
    27241 ctacaatctg ctttcgcttg ttcataaagt gatcttaaaa tttcactact ggtgatcaca
    27301 atagtatcta ctcccaagcg tttacataag ctgatttttt cgggaatatc atcggtaacc
    27361 ggctctctac gataacactc caaatattga atagttgccc cacgcaagac tgcagtttca
    27421 gcaagtagct cacgcccaga atcggctctt agaattaaaa tagttttatc agttagattc
    27481 tgcatttcag gtaatgccaa aaccccctcg ctattttcaa attctatcgg ataaatgacc
    27541 gcttgttcag ctttttctgt taaatatttc gcagtccgtt gccctaccgc aaaatatttc
    27601 aaatctgaac gaaaatggaa cccggtatct actaatgttt ttgcagcata gtccactgca
    27661 ttcggcgaaa caacaaatac ataatcgtct gattttagcc gagaaatagc cgaaggaagc
    27721 aaaggtaatt ctttaccggc ttcaatcgta aatagcggtt gatgaatagc aaaaatttgc
    27781 tgttcattca acatatctac caattcttgc ccccgactat ccaggcgtgt gaccaacaca
    27841 ttcattattg tacgttttcg ttataaaccg cagctaaaat tttatctgca ccttgagcaa
    27901 gcaactgttc cgccaccaaa atgcctaatt gctccgcctc ttgcttatgt ccttttgccg
    27961 aagcccgaat aatttgtgag ccatctaacg atccaactaa cgcattaagc gttaattcat
    28021 cgccctctaa tgtagcataa ccaccaatcg gcacttggca accgccttgc aaacgggtat
    28081 tcattgcacg ttctgccatc acgcaacaag cggtcgaact atggtttaat tttgcaatgt
    28141 agttcaaaat ccgttcatca ttggctcgag tctcaatccc tactgctcct tgaccagctg
    28201 cgggtaatga ttgttccaca gaaatatagc tacggattcg ctcttgcaag cctaaacgaa
    28261 ttaagccggc agaggctaaa ataatcgcat catactcgcc attatctaat ttgcttaagc
    28321 gagtgccgac attgcctcgc aatgatttaa cctctaaatg cggatatttc gccattaatt
    28381 ggcactgacg gcgtaagctc gatgtaccga ccacagcacc tttcggcaaa tcttctaacg
    28441 aatggtagtt gttcgacaca aacgcatcac ggggatcttc acgttcacaa atcaccgcaa
    28501 gccccaagcc ttcgggaaag ctcatcggca catctttcat tgaatgcacc gcaatatcag
    28561 ctcgattttc taaaagggct aattctaact ctttcacaaa caagcctttt ccgccaattt
    28621 tggctaatgg ggtgtctaaa ataatatcgc ctttcgttac catcgtaacc agttcgacag
    28681 ataattgcgg aaaatgtttt tctaattcgc tttttacaaa atttgcctgc cataaggcta
    28741 acgggctttg acgggttgca atgcgtaaaa tatctttcat aaattctaaa attaaaacat
    28801 tgagttaatg aattatccta ccacttttta gctgaactgc caaaaataat cgtggatttc
    28861 gctttgcatt taatcaaaaa tccgactttt tctcaaaatg tatcaatgtc tatatgacta
    28921 aatattttat agcatatata caacgttaaa aaagttgata tagatcaaag caaacataaa
    28981 acattattaa tttttaacga caaaataact cttttgggta ataatttcat cagttaaaaa
    29041 aattatcaaa tttaaatttt atgaggaacc aaactatggc taaaaatacg caaccatttg
    29101 atgcccaagc agaagtgaat gagcttgttg aaaaaggctt aaaagccctt gatgagttta
    29161 gaaaactcaa ccaagaacaa gtggatttta ttgtcgctaa agcctctgtt gctgcccttg
    29221 ataaacacgg tattttagca atgcacgctt acgaagaaac cggacggggt gtgtttgaag
    29281 acaaagccac taaaaacctg ttcgcctgtg agtatgttgt caataatatg cgacatttga
    29341 aaaccgcagg ggtcattagt gaagatgatg tcaccggtat taccgaaatt gccgaccctg
    29401 tcggtgttgt ctgcggtatc accccaacca ccaacccaac ctcaaccacc attttcaaag
    29461 cgttaatcgc ccttaaaacc cgtaacccta tcgtttttgc tttccacccg tctgctcaac
    29521 aatcttctgc ccacgctgct caaattgtgc gtgatgctgc cgtggctgcc ggtgcaccgg
    29581 aaaactgtat tcaatggatt acccagcctt caatggaagg tacatctgct ttaatgaaac
    29641 acccgggcat tgcaactatt ttagccaccg gcggtaatgc aatggttgaa gccgcttact
    29701 cttgcggcaa accggcatta ggagttggtg caggcaacgt accggcttat gtagaaaaaa
    29761 ccgctaaatt aaaacaagcg gtgtatgaca ttgtaatgtc aaaatctttc gacaacggta
    29821 tgatttgtgc ctctgaacaa gcggcgattg tagataaaga aatttacgct gagtttatta
    29881 aagagatgca atcttacggc gtctatttag tgaacaaaaa agagaaagcc ttattggaaa
    29941 aatacatttt cggtattgat aaagccaaag atgaaaactg ctcaggtgca aaactcaatt
    30001 cagcggtggt tggcaaaccg gctgcgtgga ttgcagaaca agccggcttt aaagtaccgg
    30061 aaaaaaccaa tattctgtta gccgaatgtg cctttgtggg cgaagctgag ccacttaccc
    30121 gtgaaaaact ttcgcctgta ctggctctgt taaaatccga ctccaccgaa cacggtttgg
    30181 aattgtctga agcgatggtg aatttccacg gtttagggca tagtgccgcc attcataccg
    30241 aaaacaaagc cttagccaaa acctttggcg aacgggtaaa agccattcgg gtgatttgga
    30301 actcaccatc aacctttggc ggtatcggtg atgtatataa ctccttcctg ccatcgctta
    30361 cgctgggctg tggttcctac ggtaaaaact ctgtaggtaa caacgttagt gcggtgaatt
    30421 taatcaatat caaacgtgtg ggcagacgga gaaataatat gcaatggttt aaagtgccat
    30481 caaaaatcta ctttgagcgt gactcaattc aatatttgaa atcaatgcac gatgtgcata
    30541 aagtaatgat cgtaaccgac cgctcaatgg ttgatctcgg ctttgtggat agaattaccg
    30601 aacaacttcg ccaacgtcgc aaccaagtga tgattcagtt ctttaccgat gttgaaccaa
    30661 acccaagcct gcaaaccgta caacgtggta cagaattaat gcgtagcttc cagcctgata
    30721 ctatcatcgc acttggtggt ggttcaccaa tggatgcagc caaaattatg tggttattct
    30781 acgaacaacc ggaagtcgat ttccgtgatt tagtgcaaaa atttatggat atccgcaaac
    30841 gtgcattcaa attcccacaa ttaggcagaa aagcgaaatt tgtcggcatt ccaaccacct
    30901 ccggaacagg ctctgaagtc acaccgtttg cagtaattac cgatggcgat attaaatatc
    30961 cgctcgctga ctactcgctt accccaacca ttgcgattgt cgatcctgcg ttagtaatgt
    31021 ctgtgccgtc tcacgttgct gccgacaccg gtttagacgt attaactcac gctaccgagg
    31081 cttacacatc gattttagcc aacgactata ccgacggctt agccttgcaa gccattaagt
    31141 tagtgtttga aaacttggaa aaatcggtca aagagtttga tgaaaccgcc cgtgaaaaaa
    31201 tgcacaatgc ttccacaatg gcagggatgg catttgccaa tgccttctta ggtatttgcc
    31261 actcaatggc acacaaaatc gggggtaaat tccacaccat ccacggtcga accaatgcga
    31321 ttttactgcc acacgttatt cgctataacg gcacacgccc aaccaaagtg gcaacttggc
    31381 caaaatacac caattatgtc gcagatgtgc gtttccaaga tattgccaga atgcttggct
    31441 taccggcaga aaccccggaa caagcggtgg aagcttacgc ccaagcggta cacgatttag
    31501 ccgttcgttg cggcgtgaaa atgtcgcttc gtgagcaagg cgttgatgag caagccttct
    31561 tgaatgcccg ccgtgaactt gccctacacg catttgaaga ccaatgcaca ccagcaaacc
    31621 cacgtttggc aatgattgaa gatatggaag cgattatgac taaagcctac tatggcaagg
    31681 aataaagcac aatttaatcg ttaaacttac taaatggccg cttgcaagcg gtcatttttc
    31741 ttgaaatttt tacttttccc ttcacaaaat actttcgctc ttttacaaag catagtattt
    31801 ttatcgctcc ttttatctta caggaaatac tatgcaaatt acgattttag acggcggaat
    31861 tagccgtgaa ttaatgcgtc gcaatgctcc atttcatcag cctgaatggt ctgctgccgc
    31921 tttgtatgaa ggcccacatt ttgtgcaagc ggtacacgaa gattttatcg ctcacggggc
    31981 agaagtgatt actaccgaca gctatgcggt tgtgccgttt cacattggcg aaaaacgctt
    32041 tgcggcagac ggcaaaatgc ttgccgattt agccggtcgc cttgccaaac aagcggtcaa
    32101 aaattcagga aatattgcaa ctcaaattgc aggctcactt ccaccaatgt ttggctctta
    32161 ccgtgccgat ttaattcaaa tggaacgctt tgctgaagtc gctcagcctt taattgacgg
    32221 gctttcgcct tatgtggata tttggctttg cgaaacccaa agtgcgatta ttgagccgat
    32281 ttccatcaaa gcattattgc cgaaagacaa ccgcccgctt tgggtctctt ttaccctcac
    32341 cgatgatgaa ccaaccaccg agccacaact tcgctcgggc gaaagcgtta aacaagcagt
    32401 cgaagaaatg gtgaagttag gcgtgcaagc gattttattt aactgctgtc agcctgaagt
    32461 gatcggcgag gcattaagtg taacccaaaa aactttagcc gaattaaaag ctacccatat
    32521 tcgcacagga gcttatgcca acgcctttgc tccacaacca aaagatgcca ccgccaatga
    32581 cggtttagat gaagttcgcc aagatttaac cctggaggct tatttaggct gggcaaaaaa
    32641 atggacggaa caaggggcaa ctattatcgg tggctgctgc ggcattgggg ttgagtatat
    32701 tgaaacgctg gcaaaaaatt taaaataagg aaatcgaatg tcaaataaaa aaataggatt
    32761 aatttcactc accgccttag tgctaagctc aatgattggc tcggggattt tcagcttacc
    32821 gcaaaatatg gcagccgttg ccggagcaga agccattacc attggctggc tgattaccgg
    32881 tgtcggcatt atctttttag gtttatcgtt tttctttatt tcccgcttgc gtccggattt
    32941 agacggtggc atttacacct acgcacggga gggttttggc gagctgatgg gctttatgtc
    33001 agcgtggggc tattggctct gtgccaccat tgggattgta ggatacctca ccgttgcttt
    33061 tgaaggtttg ggtgtattta ccgacaaccc gaacaccgtg attttcgggc aaggtaacac
    33121 cctcgcctct tttattggat cttcaatcat tgtgtggctg gttcacgccc tcatcgcagg
    33181 cggtatcaaa gaagctgcct ttgtaaactt aattgccact tttgtgaaag tcgctccgct
    33241 cattctgttt atcgggttag gcatttggta tttcgatgtg gatctgttta atagcgatgt
    33301 taaagccacc gcacttaata atagtgtaag cgaccaagtg aaaagcacaa tgttaatcac
    33361 cttatgggta tttaccggtg tggaaggggc ttctgtgctg tcggctcacg cgaaaaagcg
    33421 ttctgacgtg ggactggcaa ccgtattagg tattattatt gcacttgctc tttatgtggc
    33481 aattaccatt ctttcactcg gaattctgcc acgggaaact attgccaata tggcaaatcc
    33541 gtcaatgggg ccgttgctcg atgcaatgat gggcccaacc ggcaaagtga ttattactgc
    33601 ttgtttaatt gtatcggtgc ttgcctctta cattagctgg acgatgtatt cggcagaagt
    33661 gccttatcgt ggctcaaaaa acggggcttt cccgaaaatt ttagacaaag tgaataaaaa
    33721 cggcacgccg attaactcac tctggtttac cggctttatc gtgcaatttt gcttggtgtt
    33781 ggtgtttgtt tttgagcaaa gctataacac cttattgctg atttccacct cgatgatttt
    33841 aattccctat ttcttaatcg gggcttattt attcaaatta gcgattcaaa ccaacgccac
    33901 ttggtacatt aaactcaccg gctttatggc agccctttac ggattatgga ttgtctatgc
    33961 cgcaggacta gaatatttgc tgctttcggt ggtgctttat gtacccggaa ttttactctt
    34021 cctctactcc aactataaat tcaacggcag attaaccctt tcaaccgctg aaaaggtcat
    34081 cttaatcgtg ctactggtaa tttttggcta tgccgtgatt gagctgccag cactattagc
    34141 agcataattc ccatcaaaaa tgaccgcttg caagcggtta tttttctagg atcttctgca
    34201 aagattcatt agaatagaaa caacgtcaat aataaataaa aagaggagaa acaatgcaaa
    34261 cttatcaaca taaagccctt tgtcgggtaa gaaccattac cctttttctg agtttaacca
    34321 aagataaatt gcagtgggaa acggcattaa atgcggcaaa agcagaattt gatctattag
    34381 ttcccgctat tcaaacacaa ggctatcaca tacaatcgat tcgaatcgtt accaacagtt
    34441 tcggggaata tcttgatctc actaatattg aaacagcgaa acaggattta gcctatctta
    34501 aacagctatt aacccaactt aacgatagcg gtttacgcat tcgctttgcc attggtgagg
    34561 caaaaacacc ccacgaatta gcattactac ctgagctgat tttaaattat ggtgatttat
    34621 ctaacgcttg tgtcaatatt gaacccgatg aatttgggat tttagacaat gaaaccattt
    34681 tacaatctgc tcaaattatc aaacaaatcg ctgaaattac cccaagaggt gaaggcaatt
    34741 ttaattttac ggtgaatttt aactgtaaac cttttattcc ttattttccg gcaagctacc
    34801 attcaagcaa gctccctaac agttttgtga taggcctaga aacaccagat ctattagtag
    34861 cggtgttaaa agagctgaaa gccagcccac ataacgactt ttatcgccaa tgctatgaaa
    34921 cgatgtctca agccttgcaa tatcacgttg atgaagttct cgaagcagta aaatcggtac
    34981 aacacaaatt acaatttgcc tttgctggca ttgatagttc tgctgctccg tcaaaaaact
    35041 gtgcctcaat gacagaagtt tatgaattaa tgggcgtacc attttttggg gcagccggaa
    35101 cagtagaagc ctcttcactt ctgacaaaag tctttaaatc tatcaaacat gtaccgcttg
    35161 tcggtttttc aggtttaatg ttggcagtaa ccgaagattt aggcttagcc gcaggcacac
    35221 acaaagccca attcgacatt cgtgctttac taacttatag tgctgtttgt ggcattgggt
    35281 tagataccgt accgatttcc aatgaagcca ctgttgaaca aattgccgca ttaatgcgag
    35341 acaccggcac aatggcattt agactaaata aaccgcttac agtacgttta tttccaattc
    35401 cgaataagag tgctggggaa gtgacagaat ttgaaagtga tgatttatgt aactgccgaa
    35461 ttttagctgt accttaaaat aaaggctgat ggatatttcc atcagccttt caatttactt
    35521 caccttcaat tttttaccta ccgtgatctg ataatttttc aaattattca gctcactgat
    35581 tttttgcggc gtagtaccgt aagctctagc aatcgagtaa accgtttcat cttgttggac
    35641 aatatggtag ccactgttag acaccttaat ttctctttga gagtctgatt ttttagactg
    35701 atttttttga tctttctcaa gagctgtttt ttcttttagt tgctgctctt ttttcttatt
    35761 ggttttagcc gaatcttctt ttttatcctc ttttttgctc ttttctttca attttgtctt
    35821 atctgattgc gtattcttct cttgtttctc agaagcaggc tttttagtta aatcagcttt
    35881 agcagttttt tcctctttct tattttgctt atcttctttg tccgattttt tactgaccga
    35941 agaactagca actgcatttt ttgcccgata agcgactaat ccattataaa tggcccgagc
    36001 aacttgttta cgataatttg cactggctag ctttgcttcc tcggttgaat tagataaaaa
    36061 tcccgtttcc accaatacag atggaatatc aggtgaacgc agaacactta agcttgcgtg
    36121 ctgaggagac gattttgcta atgcagccac atttgacatt ttagctaaaa tgctcttgcc
    36181 taattcatag ccggcacgtt gagagtgaga gaactgtaaa tcaagcactg tttgatttaa
    36241 ataacgttca ttgttgcttg aaagcaccga accagccccg ccaagtaatt ccgactgctt
    36301 ctcgtggtct tccaaccatt tacccatttc atcgctagca cggctattag aaagtaccca
    36361 aaccgaagcc cctttcaagg aatcgccacg aggcgaagag tctgcgtgaa tagaaaccag
    36421 cagatcggca cgatgcttac gggcaatctc ggtacgttgc ggtaattgga taaaataatc
    36481 tcccgagcgt gtcatcactg ctttaaaatt aggatcggca tctaacaagg cttttagctc
    36541 tttagaaatt gcgagggtaa cgcttttttc caaaatcccc agatttttac caatagcccc
    36601 cggatctttt cccccgtgtc cggcatcaat cgccacaatg gttttggcaa atgtggaaaa
    36661 actgaataaa ctcaatgtgc taaaaacaat aaatctgata acttgcttca ttacctcccc
    36721 tacaagcggt ctatttttga tgaaaattta ctaatatatc tactgcagtt tgattttgcg
    36781 gcaacaggct aatctgccgt ccgtcattct tataatcaat ttggatcaca aaatcagcct
    36841 ctggaatcat tcctttacct ttaactgccc attcaagcaa acaaagcgtt tgtggtttga
    36901 aataatcacg aattcccata aactccagct cttcaggatc ggctaagcga tacaaatcaa
    36961 aatggtaaag gctgaaaggc ggaagttggt attcttccac cagagtataa gttgggcttt
    37021 ttacattgcc ttgatgcccg aaagcccgta cgatcgagcg ggttaaggtg gttttacctg
    37081 ccccaagttc gccgtttagg taaacaacca gcgaatgagc ttggtcttgc aataaatatt
    37141 tcttaagttc taacgcgaat gattgaccaa attccagcaa tttagtttca tcttcgcagt
    37201 aaaaagagag agaatctgtc attatttttg gtctagctga ataaaatgtt cccgataaaa
    37261 tttcaattcg ttaatggatt cacgaatatc gtccaacgct aaatgcgtat tgcctttact
    37321 gaatttatct aaaatctccg gtttccaacg gcgtgccagc tcttttaaag tactcacatc
    37381 taagtggcga taatggaaat aatcggctaa atcaggcata tatttataca aaaaacgttt
    37441 atcttgagca atgctgttgc cgcaaatcgg agaagcgcct tttggcaccc agcgttttaa
    37501 gaagtctaaa gtttgcaact ctgctgcccg ttcagtcaat ttgctcgctt tcactcgttc
    37561 aatcagcccg ttagcggtat gggttttgac gcaccaatca ctcattttct ctaataaatc
    37621 atcggtttgg tgtaccgcaa gtaccggtcc ttccgctaaa atatttaaat ccttatcggt
    37681 cacaatggtg gcgatttcaa taatgcgttc tttttccgga tctaaccctg tcatttcaag
    37741 atcgatccaa attaaatttt gttcgttttg agccatttta tttccttaca cttttgcaat
    37801 ttttagggca tttttgaccg cttgcggcac aaattggctg atgtcaccat tgtggcgata
    37861 gatttccctt accatcgttg aagaaaggta acgccattct attgaagggg gaaaaaaaat
    37921 agtttctaaa tcgcccgata atttgtaatt taactgagcg agttggattt catagtcaat
    37981 atcatctgcc ccacgaatac cacggattaa cgctttggca ttctgctgtt tggcaaagtc
    38041 tgctaacaat ccactaaagc caatcacctc aatattttgc cactgggtac agctttgttt
    38101 aacaagctcc actcgttctt caagactaaa aagcggctgc ttgcttgggt tttgagcaac
    38161 ggcaacaatc acttttccaa ataagtgaga ggctttgcaa attatgtcca aatgcccatt
    38221 ggtaatggga tcaaaggtgc ctgcataaat tacgttataa ctcattttat ttctctaaat
    38281 aggaggctaa taaatccaaa tggcgtttta atgccccttg attttcctgt aacacgctta
    38341 agccggattt tgcaatttct tgtccgattt ggggctgctt aagcaataat tgaatgctct
    38401 cggtcaaagc ctcgactgaa ctttcaattt caatcacgcc tttcacctca cgcaatttct
    38461 caaagatttc agggaaatta taggtgtaaa gcccagaaac caccggaata ttaaaagcga
    38521 ttggttcaag tggattatgc ccaccgtgtt tgaccaaact gcctcctaca aaagcaatgt
    38581 cagacaaccc atacagtaac atcatttccc ccattgtatc acctaacatt acttgagtat
    38641 tttggcttaa cgttttattc tcagtacgtt ttacataatt taaatctgat ttttgaatca
    38701 gtagctcaac taaaccaaaa cgctccggat ggcgaggcac taaaatcaac actaaattcg
    38761 ggtaatgctc taataagagt ttatgagcat ctaaaatcag cttctcttcc ccttcgtgag
    38821 tactgccggc aatccaaatc ggtctctctg ttaaattcag actagcttta gttttaatca
    38881 ccgattgatg aagctgtggc gtaatttcta aatcaaattt caggttaccg gtattaacca
    38941 tttttgccgg tgcataaccg agtgctaaat agcgatctcg gcttacctca tcttgagcca
    39001 taatcagact aatttggttg agcatatcct taatgctacc ttttacccag ccataacgct
    39061 tcgcagaacg tggcgataag cgggcattgg caatcacaaa tggaatttta cgaatattta
    39121 ctttacgaat taaattcggc caaagttcgg tttcaattac aatcatcaat ttcggatcga
    39181 taaaattcaa aaaccgctcg atagcatcag gtaagtcata aggcaaataa aaatgtgaaa
    39241 cactattacc aaaagcagct tgcacacgcc cagagcctgt tggcgttacc gttgtgacta
    39301 tcaacggaag ttcaggatat tgcttgctga ctgccttaat caaaagcgtt gcagcaatca
    39361 cctcaccaac cgatgccgca tggattacca ccccttttgc tttcggtttt tccgattcgt
    39421 cataaatccc ataacgctcc cataaacgtt tccgataagc cggttgttta cgccctttgt
    39481 accacattaa tagcagaacc acaggctgta atagataact taaacaaata tagagtaaac
    39541 gtagcattta ttttccttat accataaccc tcacctcttg tgggagagag tcaaatacgc
    39601 caataaatcg ttcctctctt gttcgagagg ggggaacaag cggttatttt taccaaaaat
    39661 tttgcaatct atatcctcaa agacaaaacc acggaataac cttaatccgt ggtttatctc
    39721 gcatcattac gcttgatgtg gattgcgggt attcgtattc actaagttac gcattaaaag
    39781 tgcaaaatcc aactcaatat ctgccggcac atctaaaaag acaaaatgcc cgtcaccgag
    39841 tgctgcgtcc acattttcat ttttgcggtt aagcatacgc tcgattttaa atacaatgtt
    39901 gcctttaggg gtcatcattt ccactgaatc gcccactaag aatttgtttt tcactgccac
    39961 ttccgccaag ccttctgcat tgcgtttgcc ggtaaattcg cccacaaatt gttggcgttc
    40021 tgaaatcgaa tagccatatt catagttttg gtattcatcg tgagtatgac gacgtaagaa
    40081 gccctctgta taaccacggt gtgcaaggct ttcaagagta tccattaaac tttcgtcaaa
    40141 cggtttaccg gcagcggcat catcaatcgc cttacgatac acctgagccg ttctcgcaca
    40201 gtaatagaac gatttcgtac gcccctcaat tttcagtgaa tgcaccccca tttgagttaa
    40261 acgctcaacg tgttgtactg cacgcagatc tttagagttc ataaaatagg tgccgtgttc
    40321 atcttcaaag gcggtcattt gctcatcagg gcgttgtgat tctgtataaa ggaacacttt
    40381 atctgttgct tcgccattac ctagagtagg agccacattt ttgacttcaa tttccggctc
    40441 atacttaggc acaatttgcc ctacctcatc aatcttacct tcttccattt tatattccca
    40501 acggcaagca ttggtgcaag tgccttggtt tgggtcacgc ttattgatat agcctgaaag
    40561 caagcagcga cctgaatatg ccatacacaa agcaccgtga acgaagatct caagctccat
    40621 atccggcact tgttcacgaa tttcttcgat ctcttcgagt gataattcac gggataaaat
    40681 cacacgggtt agccccattt gacgccagaa tttcaccgtt gcccagttta ccgcattggc
    40741 ttgcaccgaa agatgaatat ccatttcagg gaaattttca cgcaccaaca taattaagcc
    40801 cggatcagac ataatcaaag cgtccggctt catatccact accactttta gatctttgat
    40861 gaaggttttt aattttgagt tgtgtggcgc aatgtttacc accacataga atttttttcc
    40921 taaggcgtgg gcttcatcaa tcgcaacttt taaattggcg tggttaaatt cattattacg
    40981 cacacgcaag ctataacggg gctgtcctgc ataaatcgca tcggcaccat aagcaaaagc
    41041 gtaacgcata ttttttaaag aacctgcagg cgaaagtagc tcaggtttgg catattttaa
    41101 agtcatatta ttctcttttc tgataacaag tcaggacttc tcgacgtgag aagcgtaagc
    41161 ggtatatttt ctaagaaata ttgcgtgatg gcaagctaat ccattacaat ccgattttta
    41221 tgtggggaac aatatgaaac ttaaatacct tttagcaaca acattactgg ctttttcaac
    41281 atttaccgcc gctcaaagca tcaagacgga gatgatgcaa atgaatatgc aagcgaataa
    41341 attgatgcgt gccgaatcgg cagaagagtt tagcgaaatt gcgaatgatt tcattataat
    41401 taccgagaaa accaaaggga tttttcccaa tagcgtagaa ggcgataaag cagctcagga
    41461 agattaccaa gccggtatgc aaaaattaat tgatatggtt aatcaagcca gtgagaaagc
    41521 tcaagcaggt gaattgcaag aagcaaaaat gctgatttcc gagcttgaaa tgatcaagcg
    41581 tgaatatcac aaaaaataca aataattcaa cacattaaaa gggtgagcta aagctcaccc
    41641 tttctattca aattccagtt caaccgaatt ctcaccaaga agtgccttta attcgctaaa
    41701 cattgcctca ttcgggctga ttcgccactc tactccgcct ttgagcaata ccctaccttc
    41761 cgggctttgg taataaaaat gcagcggtaa agtgccttct ttatgtgggg tgatgatagc
    41821 ggtcattttt ttaataaaat ctgcagaaag ttgctctttg ctaatcgcta acgctaaact
    41881 tttggcaaat cgaccccttg cttcatcaag ggataacact tctcgagccg acattttcag
    41941 tccaccgctg aaatcatcaa actgtaccga acctgttgcc acaataattt ggtcttgttg
    42001 catcaaatgc ccgaaatttt ctaaggcttc cgagaaaagg gtaatgtcca atttccccga
    42061 gcgatcttca atagtcgcaa tcccaatacg gcttcctcgc ttggtaactg ccactcgaga
    42121 tgccataaca attcctgaaa ccgtggtcat ttgccctcgg aaagtcggtt gcaattcatt
    42181 cagccgatta ggggcatagt gggataattc tttgaggaat ctaccaatcg ggtgtccgct
    42241 taaatacagc ccgagcgtgg cacgctctcc atctaaaatc acttgctccg accattttgg
    42301 cgtattggcg taagcatttt gcacttcttc cggtgtctcg gtaagcacgc caaacatatc
    42361 gctctgcccg agttcctcca ttttagcgtg ctgatctgag gctttaagtg catcttccaa
    42421 attcttcatc aaggcagctc ggtgagggcc taatttgtca aaagcaccgg acataatcag
    42481 gctttcaaag gtgcggcggt tgattttttt cagatcgacc cgagcggtta aatcaaatag
    42541 atctttaaat ttcccctctt tttggcgagc tgccagaatt gcctcaatcg gtccttcccc
    42601 aacgccttta attgctccta gcccgtaaac aatttcgcct ttttcattta cgctaaaacg
    42661 atgtttaccg ctgtttacat caggcggcac aacggttaag cccatattca tacactcatc
    42721 gtagaacccg acaattttat cggtattatc catctctgag gtcattaccg cagccataaa
    42781 ttctgccgga taatgggctt ttagccaaag tgtttggtaa gaaaccaacg cataagctgc
    42841 tgagtgagat ttattaaagc cgtagccggc aaacttttct accaagtcaa aaatttgacc
    42901 ggcaagttta ccgtcaatcc ctttggcttc cgcccctttt tcaaacactt cacgctgtgc
    42961 agccatttcc tccggtttct tcttacccat tgcacggcgg agtaagtccg ctccaccgag
    43021 tgtataaccg gcaagctctt gtgcaatttg cataacctgt tcttggtaaa caatgacccc
    43081 ataagtcggc tcgagaatag gttttaagca ttcgtgttgg tattgcggat caggataaga
    43141 aacctcttct ttgccgtgtt tacggtcaat aaagttctgc accatacctg attccagcgg
    43201 ccctgggcgg aatagtgcca ccaatgcgat aatatcttca aaacagtccg gcttcaggcg
    43261 agaaattaag tctttcattc cccgtgattc aagctggaat actgctgtag ttttagctgc
    43321 cagcaacaga gcaaaggatt ttttatcatc aagcggaatg gtttcaatcc gaatcggctc
    43381 tttgccttca cgagccaaac gttcgttaat catctccaac gcccatttga tgatggtgag
    43441 cgtacgcaag cctaagaagt caaacttcac caatcctgca tattccacgt catttttatc
    43501 aaaatgggta accgggtgta agccctcgct atcgcaataa agcggcgaaa aatcggtaat
    43561 cgcagttggg gcgatcacca caccaccagc gtgtttacct gcattacgag ttacaccttc
    43621 gagcttacga gccatatcaa taaggtcttt cacctcttca tcggcttcat atagctcagg
    43681 caattttggc tcagcggcaa aggctttttc aagcgtcatt cctggatcgg gcggaatgag
    43741 tttggagatg cgatccacaa agctataggg gtgtccaagc actcgcccta catctcgaat
    43801 gaccgctttc gccgccatag taccgaatgt gataatttgc gataccgctt gtcgcccgta
    43861 ggtttccgca acgtgttcaa tcacacggtc tcgcccgtcc atacagaaat caacgtcaaa
    43921 atcgggcatt gaaacacgct cagggttgag aaaacgctca aaaagcaaat caaattccaa
    43981 tgggtcaaga tcggtaatct tcaacgcata agccaccaat gagcctgccc ctgagccacg
    44041 acccggtcct accggaatat cattatcttt ggaccattgg ataaactcca tcacgatcaa
    44101 aaagtaaccc gggaacccca tttggttgat cacatctaat tcaacttgca atctttcgtc
    44161 ataaaccgac cgcttgttcg ccctttcctc aggatcaggg aatagaaact ctaaacgctc
    44221 ttctaagcct tctttcgatt tttttaccaa gaaatcttcg gtggaaagct caccggtcgg
    44281 gaaatttggc aggaaatact cgcccaaacg cacggtaacc gaacagcgtt tcgcaatttc
    44341 aaccgtgttt gccaatgcac tcggtaaatc ggcaaacagc ttgcacattt cctcttcagt
    44401 acggaaatat tgtttcggtg agtatttttt cgggcgtttc gggtcgtcta gggtgtagct
    44461 gtcgtgaatg gcaacccgaa tttcgtgtgc gtcaaagtca tcttctttca agaagacaac
    44521 atcatttacc gccactaacg gaattgcatt tttttgtgaa aattcgaccg cttgtttgat
    44581 atagcgttct tcgtctgccc gtccggtacg gcaaacggaa aggtaaaaat gattcgggta
    44641 atattgctga taaaaagcta atttttcttc agcttcttgt cggttttctt tgagtaaggc
    44701 tttacccaca tcgcccattc gcccgccgga aagaatgatg atgccctcat tcagctctgc
    44761 taaccattca cgttccacca tcggaaattc cacatagcct tgctgatagg ctttggacaa
    44821 aatttgggta atattatggt agcctttgtt gttcttcgcc agtaatgtca gctcaaaata
    44881 atcttcattg ccgctctcgg ttctaacata aacatctgcc ccgataatcg gcttaatccc
    44941 tgctcccaat gcttcgccat agaatttcac caacccgcaa aagtttataa aatccgttaa
    45001 gcccattgcc accatattat tagcggcagc ggttttaact aaggatttta ccttagctaa
    45061 accattaatc attgagaaat cactgtgaac ttttaaatga acgaaacgac aatctgacat
    45121 aggaatataa tctaagtaaa gaagtttccc ctctttagta aagactgtca ggttctaaaa
    45181 agtgaagcct tctgtgaata atcccgttgg gcgaatgtta ttcgccccta caaacgagca
    45241 ttattcttgc tcagagttac atttaaaatc cgaatgtagg ggcgaattac attcgccctt
    45301 tcagaaccta acaaccctgc tttatctaaa gaagggagtt aaaattaatc acgttttttg
    45361 cttaacagcc accaaacgat gatcaaacag agtaggcttg gaattaatgc tccaaccggt
    45421 ataggtaacc aagtggcaat taagcttaaa ttgccaaaca caatatttgc cacatagaac
    45481 ataaagccgg caacaatacc aatcacaatt ttcgccccca tcgtactact acgaagcggc
    45541 ccgaaaataa aggagatcgc aagtagcatc atcaccgcca ttgagattgg ttggaatact
    45601 tttcgccaga aggtgatctc aaaacgtttc ggatcttgtc cggtatcttt taagaagccg
    45661 acataatctg ccaagcctga aatcgagagc gactccggtt tgagtgaaac aatgcctaat
    45721 ttgctagggg ttaaactggt ttgccaaact tgatctggct gtttagcttg ctggatctga
    45781 ttttctccca cagtcgattt ttccacttta gatagcaccc agcctttttc atcactgtaa
    45841 ttcgcagttc gggcttttaa aacagattgc aattcacgtt tgttttgtcc ttcgccgaat
    45901 tgataaatca gtacgttatc taagcttttt tcatttttaa tatgattaat atagataaat
    45961 gaattgccat ctttcgccca aaacccgtct tttgtggcaa gcattgagcc gccactttgg
    46021 gcaatcgaac gcatattacg ggcaaactgc tcggtttgtg gcacgcccca ttcgccgata
    46081 atcatcgtaa aaatgactaa cggtaaggca gttttcatca cggctaaacc aatgcggaaa
    46141 cgggaaaaac cggaggcttg catcaccacc aattcactaa ggctcgctag gttgcctaaa
    46201 ccgagtaatg agccaagtaa tgccgcaatc gggaaaaagg tttcgatatc tcgtggaata
    46261 gttaaaaaag tatagtatgc cgcttttaag ccatcgtaag atccacgtcc tacatcacga
    46321 aactcttcca caaatttaat aatcgcccca agcccaatca acataaacag ggttaaaaaa
    46381 atcgcggata aaatcgtttt gccgatgtag cgttctaaaa tattcattga gaaaaattgc
    46441 attatgccac cgccttattg gttaattttt ttgcaccaaa ttgatagcgt aacttagaca
    46501 taaatttact atcccacgca tttaaaataa cacctaaaac taaaaaggca actgatacca
    46561 acggcattaa cacttccgca ttcaacttgc ctgatgcccc tgacgatttt agcgagcttt
    46621 gtagtaagaa atagattaaa taaagcaata acgccggcag tagtttagca aaacgccctt
    46681 gacgagggtt tacactactc attggcaccg ctaataatgc cattaacggt acagctaaaa
    46741 tcaaagcaag ccgccaatga agctcggctt ttgcttccgg cgttttggtt tccattaatt
    46801 tcttgaaatc ggctcgttgc actaatttct catcagattc aacgtcttga tagcctaaat
    46861 aagcagaata attctcaaaa tgtgaaatac ggaaatcggc actttgtggt gtaccttcaa
    46921 aacgcttgct ctctgccaag gttaagactt gatccccatt tggcaaacct tgcaacgtgc
    46981 cggattcagc aacaaccact gaaggtttgt ttttcttctg ctgttccggc tggaaaacgt
    47041 agatatcatt tagactgtta ttttcaattt tatcaataaa taacacatag ccaccggcag
    47101 acataaattg tccggccgaa agagccgcaa aacgtgggtt ggctttcgct tccgctaaca
    47161 tttcactctg tttattaatt gcccaaggcg taagccaaaa cacgttataa accgctaatg
    47221 cagtggtaaa aatcgagaga aacatcgcca ctttaaccaa tagcccttgc ccgataccac
    47281 aagcccgcat tacggtaatt tcactttcgg cataaaaccg cccgagggtt aataacaagg
    47341 cgataaacag tgagagtggc agcattaatt gtgccattgt cggcatacct aagcctaata
    47401 agctcaccac taaatctgcc ggtactttac cactcacagc agaacttaga acacgcacta
    47461 attgctgaca aaaaaagatc agtaataaga taaacaatat cgccaattgg cttttaaata
    47521 tctctttggt taaatatcgg cttaagatca cgttttttct ctataacatt tacaaatctg
    47581 aataccgcta aacacaagcg gtctattttt gttaattttt tgcaaagagc gcaaaataac
    47641 ttattcgaat cgctaataat acctttttca tacaaaaaaa tcacctatag aaaatatcac
    47701 gcacggcaaa accgtgcgta agtattattg ttttttcgat tttttcgatg atgttgcttt
    47761 atgagcttca agaattaatt tcttaccttg gctatcttca atttcaatct taggtggtgc
    47821 ttccgtattt tgatgaagga tagctataat attttcacct tgtgcaatat cttcaaagtt
    47881 tcctttcaca cgtaacttag ccgcatcaac actagtgtca aatactaaga atgtacctaa
    47941 tgcggtaact ctaatatttt taagccctat attgtccttc gttaccgttt tatattgagg
    48001 tgcttttttc ccttttgcag ccataatctt ctcttgatta gtcgcaatat taagaatatt
    48061 ttgaacttta gtcgcttctg ctgtagattg tgcctgttct gttaaatttg gttctccatc
    48121 aaaaataaca tccccaacaa attgcacctc tttaggctca ttttgcaata atggtgcaac
    48181 gtctttagct gaaacaacca aaaataaccg ttcacctatt ttttcaaaac ggacatcaat
    48241 attggttaat tgtgattcaa tttgttcatt aattgtcttg atcgcagttt ctgtctcatt
    48301 ttgaagcgat attttacgtg taatatcaac atcataagca ataaaaccaa cttttaaacg
    48361 ttgtgataac tgctgaagta aattgcccac atttccatca taagaaagac gtaactttgc
    48421 ctgctcatag cgactaattt gagcatcatc attagcgaaa atagtgtttt gagtccctaa
    48481 gccgattaga ccaacaacaa acgttttacc ccaaaagcgc atcattttta tctccaatta
    48541 ttctcttaaa tctaaaaaac tcttttagta taaagtaagc aaactaaaag aaaaaccagt
    48601 aaaattatct atacgaccgc aaaaaacatt taatatttgc aaataaaaag taaattattt
    48661 taaataatga tttacatcag ggtatatcta tattttactt atcattgatg attatgttgg
    48721 cattataaaa tctgtagcaa taaaaattaa ggaggaaaaa tggaatttag tgtcaaaaat
    48781 ggcagtgttg agaaacaaag aaccgcctgt ttggttgttg gtgtctatga accccgccga
    48841 ttatgttctg ccgcagaaca gcttgataaa ttaagtaacg gctatatcag cacattactg
    48901 agaagaggag atttagaagg caaagcaggg caaaccttac tcttgcataa tgtgccgaat
    48961 gtactcgctg atcgagtatt attagtcggc tgtggaaaag agcgtgaatt aactgaacgc
    49021 caatacaaac aaattattca aaaaagtgta caaactatta atgaaaccgg ttcaatggaa
    49081 gctgtcagct ttttaaccga actgcacgtt aaaggtagaa caccttattg gaatgtgcga
    49141 tttgcggtag aggcaatcca agaacaacta tatgcctata acgatttcaa aagcatcaaa
    49201 cctgaagttc gccgtgaatt acgccgtgtg atttttaatg tcgcacaccg taaagatctt
    49261 cctgatgccg aacgagcttt agaacacgga aaagccgtag cacttggaat cagccacgct
    49321 aaaaatgtag caaattgtcc gcctaatgtg tgtaatcctc actatttagc cgaattggct
    49381 aagggtttag cctacgacta tcctgccatt tcaactacca ttgttgatga aaaacagatg
    49441 gcagaattgg gaatgaatgc ttacttagcg gtttccagag cctctgaaaa tgaggccttt
    49501 ctttcagtga ttgaatataa aggcaacccg aatgctgatg cgaagccgat tatcttagtc
    49561 ggcaaaggaa tgacctttga ctctggcggt ttatccatta aacctgcgga ggcgatggac
    49621 gaaatgaaat acgatatgtg cggagctgct actgtttacg gtacaatcaa agcaattgcc
    49681 gagatgaaat taccactcaa tgttatcggc ttactcgccg gctgtgaaaa tgcggttgat
    49741 ggcaaagcct atcgaccggg ggatattctc actacaatgt ctggtttaac cgttgaggta
    49801 ctcaacaccg atgcagaagg acgtttagtg ctatgtgatg ctctcagcta tgtagaacgt
    49861 tttgaaccgg aattagtgat tgatattgct accctaactg gtgcttgcat gattgcctta
    49921 ggtaatcata acagcgggct gatgtcacct cataacggtt tagcaaacga actcttagct
    49981 gccgcagagc aagccgatga caaagcgtgg cgtttacctt taggggaaga atatcaagaa
    50041 cagttaaaat ctaactttgc tgatcttgct aatatcggcg gacgtttagg cggagcctgt
    50101 actgccggtc aattcctctc taactttaca aagaaatata cttgggcgca tctagatatt
    50161 gccggcacgg cttggaaatc tggggcagcc aaaggggcga ccggcagacc ggtatcctta
    50221 ctaacacaat ttttgatcaa taaagcccag gtctaactct cacaagcggt ctgattttat
    50281 cgagtttttg caaaaagaaa atcagaccga tcctcttcat acgcccctat attcttttta
    50341 gttatatcaa ataaattcca gctactagaa aagcgattaa aaataagtat gataaatccc
    50401 aatctcaata cttattaagg aatatcacta tgactatcta tgcagacaac tcatactcaa
    50461 tcggcaatac cccgctggtg cgtttaaaga attttggcaa cggcaatatt gtggtaaaag
    50521 tggaagggcg taacccaagt tttagcgtga aatgccgtat tggtgcgaat atggtgtggc
    50581 aagcagagaa agacggtatt ctaaccaaag acaaagaaat tgtagatgca accagcggta
    50641 acactggaat tgccttggct tatgtagcag ccgctcgtgg ttataaatta acgctcacaa
    50701 tgccggaaac aatgagtacc gagcgtaaac gcttattgcg tggcttagga gtaaatttag
    50761 tcttaaccga aggggcaaaa ggaatgaaag gagcgattgc gaaagctgaa gaaatcgcgg
    50821 cttccgaccc agatcgctat gttaccttaa aacagtttga aaacccggca aacccggcaa
    50881 ttcaccaaca aactaccggt cctgaaattt gggatgcaac tgaaggtaaa attgatgtat
    50941 tagtggcagg cgtaggaaca ggtggcacta ttaccggtgt ttcccgtgct attaagcaag
    51001 ataaaggcaa gcaaattatt tcagtggcgg tagaaccgag tgaatcgccg gtcattacgc
    51061 aaactttaaa cggtgaagaa gtcaaaccgg gcccgcacaa aattcaaggc attggtgcag
    51121 gctttattcc gaaaaactta gatttatcac tgcttgaccg tgttgaacaa gtttcaagcg
    51181 aagaagcgat tacaaccgca cgccgtttaa tggcagaaga aggcatttta ggcggtattt
    51241 catcaggtgc tgccgttgct gccgcagatc gcatcgctaa actacctgaa tttgccgata
    51301 aattaattgt agtgattctg ccttcagcct cagagcgtta tttaagtacg ctactgtttg
    51361 aagggattga agcgtaatat taaattaata taaaaatgcc ggctgatgtc ggcattttta
    51421 ttgcaaacaa gcggttattt tttataaaaa atttgcaatt tgtctcctat tgcgttattc
    51481 ttcgccacat ctttacggtt ggccgtatct aatcaatatc aacaaatcca atcttaatta
    51541 atcacaattt tacattcaaa ttatgcatct tactcaactt aaaaacaccc ctgtttcaaa
    51601 gcttgtggaa atgggtgaaa atcaaatggg cttagaaaat ctggctcgtt tacgtaaaca
    51661 agacatcgta tttgctattc ttaaacaaca cgcaaaaagc ggtgaagaca ttttcgggca
    51721 aggcgtgctt gaaattctac cggacggctt cggtttcctc cgctcatcag atagctcata
    51781 tttagccggc cctgatgata tttatgtttc tccaagccaa atccgccgtt ttaacttaca
    51841 aactggcgat aaaatagaag gtaaaattcg cccaccaaaa gagggagaac gctattttgc
    51901 cctactgaaa gttgattcag ttaatgatga caaaccggaa gcctctcgca gtaaaattct
    51961 ctttgaaaac ttaacccctc tgcacgccaa ttctcgctta aaaatggagc gtggcaatgg
    52021 atcaaaagaa gatttaaccg ctcgtatttt agatttagcc gccccaatcg gtaaaggtca
    52081 gcgagcgtta attgttgccc cgccaaaagc tggtaaaacc gtgttactgc aaaatattgc
    52141 acaaagcatc acccataatc atcctgaatg tgagcttatc gtattattaa ttgatgagcg
    52201 tccggaagaa gtaacagaga tgcaacgcac cgtacgtggt gaagtaattg cctcaacctt
    52261 tgatgaaccg gcaacccgcc acgttcaagt tgcggagatg gtaatcgaga aagcaaaacg
    52321 ctcggtagag cataaaaaag atgtggtgat tttattagac tccatcactc gtttagcccg
    52381 tgcctacaac accgttaccc cggtttccgg caaaatcctt tccggtggtg tggacgctaa
    52441 cgccttacat cgtccaaaac gtttcttcgg tgcagcccgt aatgtggaag aaggtggcag
    52501 cttaaccatt atcgcaaccg cacttgtgga taccggatca aaaatggacg aagtgatttt
    52561 cgaggagttc aaaggtacgg gtaatatgga attacacctc tcacgccgta ttgctgaacg
    52621 ccgtatcttc ccggctattg acttcaaccg ctcaggtact cgtaaagatg acctcttaat
    52681 ggcagcagac gaactccaaa aaacttggat gttacgcaaa gtcctcaacc caatggacga
    52741 agtagatgct atcgaatggc taatcgacaa attaatgatg gcaaaaacta acgaagagtt
    52801 tttcgagatt atgaaacgtt cgtagaacat aaaaaaatcc cgcttaacgc gggattttta
    52861 tcaatagcag ctgtcaataa agtaactact taaaatcccc caactcaaac aaccccattg
    52921 atctcgccac atttacataa gtataaagtg cctcgatttt ggcttttccc ggtgttgccg
    52981 gcttgccacc accaacggaa tccatctcaa tcggataacc aatgtgctgt gcataacctt
    53041 tgagaaccgc tgttgcacga gggatatgtt gtaacgtacc gatacctaat actttcttgc
    53101 cattataagt ttgcatcagc ttgataatcc caaccgcatt tcccggggta tctctggcaa
    53161 caggatcaag tagcaaacgg tctttttcaa taccattttc gctaagccat tttgccatca
    53221 catcagcctc agcaaattcc gttttcacag caccgccact gacgataatt tttgcttgcg
    53281 gaaatttttg tgccatctct ttggttttct gtaatcgatc taacaacagc ggcgaaggtg
    53341 tgccgtcttt gtttggcgta gaaccaaaaa cggcaatcgt atcagggatc attgctgtct
    53401 gtggttcatt accgtagctt gccgccagcg tttgttcggt aaaggcaaaa aagtctgtca
    53461 ttcgttgtgc gacttcggga gcaagctgtt tcagtgcaga aagacgagcc gtttcttgtt
    53521 cagtatcttc tagcaccctt gaagctaata ctgtcatcgc aagagcgtga atatcacggg
    53581 ggttttggcg caaaatttgg tcgagctgag aaagtgcttc ccgatactct ttattgacga
    53641 aatacgcctc tgcttgtaaa cggtaagtgt taaggtaggt cggcttctct ttaactttct
    53701 gatcaagcga agcatacatc gcttgccaat accaacggcg gaaattcagc acatcctctt
    53761 ttagataagg gtcatcaaca tagtctggcg catattgaat aactaaatgc tcaatcggcg
    53821 ctcctcgacc atcttcttta ccttttggtg caggcagtac ttttgctaat acaaagttaa
    53881 acgccttatc atattgactg atattgtctt ggctcaaata atcagctggt atcgcccagc
    53941 tatttacact tatcaaagaa aggcttaaag caagggcaga aagggttgtt ttgatttttt
    54001 tcatagaggc tcctatttac cattgatagt gataatttgc gtgtaatccg tatgaacgct
    54061 tcaatgcatc cccgtgtaac attgatcctt cgattgcaaa ataatggcga tttccaactg
    54121 cttgtatccc aatactgatt acattccgat gacgatcaga taaactatct aaggtatcaa
    54181 tatgacgatt tcgaaaacga tagctaatat cagcataagg tttaagtttg attgcattga
    54241 gttcaatcac ttttcctaaa cgtagccctg tcccagccca aaacattcgt gctgatccag
    54301 cttttgccca gcctaattgc agctttggcg taatttgcca ttgatgactc atcacgatat
    54361 ttcttccaat ttcactactc agactgtatg cattattatc tcgttttgtt acaccagatt
    54421 gattagtaaa atgactgtaa ttaaaaaaat ttgtccaaaa cagaccactt gtaggacgat
    54481 aaccagcata aataccagca gatgtccctt tcactttatg cgtcctattc tcaatttgcc
    54541 cctgactgat accaaatact ccaccaatag accaattatg ggaaacctga tgatctagcc
    54601 cgatatgtaa taagtgatag tcttcggttg aacgattttt taaacgatat ttggatagac
    54661 tatccgaaag ccataaattc caatcttgtg tatgttctat ttctgctaac ctacggtaca
    54721 gatcataagt tgcttgttcc atcaaattaa gctgtacaac ataatgctcg gaaaaaggat
    54781 tgttctgctt tattattaaa cgactaaggg cttccgtact ctgttttaac tgctcttgcg
    54841 ttttactaag ttctttattc aattcctctt cagcttgctg atgagcctgt tttgctgttt
    54901 ctaacgcctg tctggctact tccagctcat ttgcagaatt ttctgcattt tttactgctt
    54961 gatctcgctc agctaccaat ttttctaaat aattctgctg tgctttttcc aacgcttctc
    55021 tttgttcttt ttcagcttgt tctttggcaa gcaaattctc aaaatcgccc aaggtaaata
    55081 accccattgc acgagcaaca ttaacaaatg tataaagagc ttcacctttt ttattttttt
    55141 cattaggagg agaaccgcct ccggcagaat caatttccaa ttcatatcca atggaatccg
    55201 catagctttt caatacagac attgctctcg gtaaatgtaa gatcgtaccg atccccaata
    55261 cttttctacc tccatattcc ttcataaaat caatgatacc gacagcattt cccggagtat
    55321 ctcgtgccac atcatcaagc aacagtctgc tttcatcaac gccattctct atcaaccatt
    55381 ttttcattac atccgcttct gcatagatat aacgaacagg tccaccactt aaaataattt
    55441 ttgcattcgg aaatttctct gccatttctt tggttttctc aagacgttgc aataatccct
    55501 tgcttggagt accgtctggg ttaggcgatt gcccaaatac cgctatggtg tcggggatca
    55561 ttgttgtttg aggctcacta ccatagctgg cagcaagcat agtgtctgta aaatgtagat
    55621 attgctgcac cttttgcgca atacttggag agatttgata aagcgctaat aaacgctcgg
    55681 cttcagtatt aggattttcc aatacccgac ttgcaaccac actcattgcc attgcatgaa
    55741 catcattagg gttacgccgc agaatttgat ccagttgaga taatgcttct tggtattgct
    55801 tattgataaa gtacgcttcc gcctgtaatc ggtaagtatt taaataatcg ggcttttgtt
    55861 tcgtttttaa atccaatgac gtatagagat cttgccactg ccaacggcga aaacgaataa
    55921 catcctcttt aagatagata tcattaagat aatctgatgc atatttcacc accaaattct
    55981 caatcgcttc accacgccca tctgcttttg caataggcgc aggtagtgga tttgcgagga
    56041 aaaaattaaa acgggcatca aattgccgaa tattatcgtt acttaaataa ccgtcagcat
    56101 aagccgataa aggtaaggct gaacctaata tcaaagcaag ataagaataa cgcaagcgtt
    56161 tcattatgat ttctccttat attgggtgaa gaagtattta taacttttta catctaacca
    56221 acaaagttga ttaaggataa aatttgtttg tgctatttta ttaataatat tcaaaatcat
    56281 ttttaatttt tgtggttgct caatgacatt aagactcatc acaataaatt tagtataacc
    56341 atataaagtg aaatcttctt tatttttaaa ataatagatc tcaaattttt ccaccgaggc
    56401 attgagttga taaaatagtt taatcttgtc ttgtttattt tctaaaataa tctgttcgta
    56461 attaagatat tcttgctcaa gatgaaactc atttaggcga tattgtgctt caatttcaat
    56521 cgatttaatg ctaggcaaca cctcatcata ttgataagcg tgataaaata cttcgttgag
    56581 tgatgttgca tattcatttt catttaaact actgtcagca aaataaatag gcttataggg
    56641 aatagccata ttttttccat attcattaca gagatagtag tcataaggtt tatcttccat
    56701 tatggcaagc tcatatagca ctttggtttc aattttcaaa atatagtcgg aaaagtaccg
    56761 cttaatattc cgttttaact gttgggtgct taatctgcca ttaagggcaa taatcgccag
    56821 tcggagcggt ttacgttcta attcaattcg attaaccatt ccggaaaaaa tatcaaaaat
    56881 aaaatactgt tctcgaatag ataggctata cccgtagttt ttttcaatgt catccactaa
    56941 tttttctact gtatgagcca aaattggatt tctatgtagt tctgtttggt taaatagccc
    57001 taaatccaca tcatctgaaa tgctaagcat cattttcatt gcgataggga tcagcatttt
    57061 aagcaaatct ttacggcaag tgtcatcgtg aatttccgat aaatttaaat atgcagaaaa
    57121 ctgagtaaaa ataaaacgat gaatttccca agccttatct agcaacaatg ggtaattatc
    57181 cgaattacaa tctttaaagc ggtagagatc tgtactggct atcgcaatat aggtcagaaa
    57241 tcgaataact tccggattaa actcaaaacg actgtcttgt tcacgaagct gttccagtaa
    57301 cttaattaca aactgatatt cattcgtctg ttgataatta aaatttaact tcggtaacaa
    57361 taactcaggc tgttgattat aaaaatagcg taagtaaata ataaaccgct cagcataaat
    57421 atcagaaaat actaaattga aatgaataat tgtcttagct aacctttcac ggattttttc
    57481 agtcatagga caagcaaaac actgttcaaa ttctttaatt ccaaatggat gttcaagctg
    57541 ggtaaaatat ttatataatc gtactgtgag cattatttta cgataacttt cacctacaat
    57601 gttcattccg tgatagggtt tcgcttcgag tatcaatcca tattttccta acaaggcttt
    57661 aacttgacta aattcttttg ttaaggcact ggtaaaactt aaataaagct cactctgaaa
    57721 atcttcaact ttcaatgcac gctggctcac cagtaatcgg cgtaaaatcg catttacccg
    57781 agactcaaat ttattattta ccgtcatcgg ctgtgatatt tggaaatact gttttagttg
    57841 cgtgtgtaat tcttcaaact gaatcaataa tttatagcca taaaacggtc gagaaaaaat
    57901 ctgaatgccg taaggttcaa gtttttcttt taataactta atctcttttt ttaccgttcg
    57961 tactgaaagc tgtaactccg tagaaagtgc atcactatta ataaattgtt cacttcttaa
    58021 cagtaataaa aataatgatt gaaatcgacg gttacggctt aatagtgcca atatcttttt
    58081 taaatcggct tgaatatctt gcgacataat attcccttat gtgtgtcaga attaaatagg
    58141 atttcgtcag ccctttcaat tttaaggctt gcacgatatg tagtgaatta agatatgata
    58201 ccgaatttat cactagaagt cctaaattag gtttaattgg agaaaaagaa tgaagcgtag
    58261 aaaggtgtac ttttatatac aacaaaaaag ctgcctttca gcagcttttt ggggatagta
    58321 gcattactag tgctgtaaac aacatcttac agggagcagc tggcaactgt cccgactttt
    58381 ttatgctacc tttttcactc actttgtcaa aatctcacaa tgtatcagca atgacttttt
    58441 ccagtaactg tttaaattcc atataatcgc ataatccata ttggtcagct tggcaataat
    58501 ccaaactcaa aatgtgatgt tgcggtggtt tatcaaggct tagtggaatc gctttacgaa
    58561 tttggtcagt agattgatat acatattcca gtttaacttt ttgtgcttgg ctactttttt
    58621 ctttccagat ttcaataaag actttccctc ctattggagt ttgttcatat tgatgtgcta
    58681 atttataagg cttaacattt aatgcagaaa gtaaggctat aatattggaa tcgtgtccga
    58741 ctaaaagtgt tattttattt tcactattta aatcttgctg aatatatttt aatagcggta
    58801 atgaaatatg tttagcaata aatggatctc ctcgtagcat aaattggtaa tcgtttttaa
    58861 ttttattgag tgtttgccat ttctgatcac tatcaagctg gttatttgca atctctttta
    58921 aaggaaaacc ttcataatat tgcagcaata aggcatcgac aatattttta cttaatcgca
    58981 tcgtaccgga aacacctggt tatttatcct ttttaatcct taatttacca acatcattaa
    59041 aaaattcaca ctgtttttcc tgcaaacatt tttctgaatg agcataatcg attatttcgc
    59101 ttaataaatg ataggatggc gctaaatact gatgggtttt attgaggtca attttgctta
    59161 atgctgtttg cacaaatgtc tggtcatcgg agcgaataat tggattaaac accggatcca
    59221 tctttccaat ctgctggtgg tgtttaactt gtacattaca acctgaaaac ccaccggcaa
    59281 ccaaagcttg tgcagtgcca attgtacgtt gcaggctatt agcataaacc tcaatctgct
    59341 tcccactttc acagcttgcc ttgtccaata acccattatg tgtgagccat tgaccaagat
    59401 actgcccaaa ataggtttcc aacagcgtcc ctttatgggt taaatgaccg gtcggtacac
    59461 tccaatttgc ccatttataa ggggttgatt tttctaaatc actgcctttt tctgtaagag
    59521 gggaacgtaa cccgtgtcgg ctaaatataa tgattttttc taattcgtag tgggaagttg
    59581 gtatattttc aattggttga gcaaaaagag gaaatgctgt gaaaattgtt gtcagacaag
    59641 cggtagtttt ataccaatgt tttgcaaaat aacgcatatg aaatttctcc atttgtagtg
    59701 tgttcaatat tacaccctac cgttctacgc caaataattt gcccgtaatg cttcaatttc
    59761 cttcgcagta atacctaata ccctttgggc atattgctca atagtaccat attgggtttc
    59821 aatagtatta agcgattgtt cgataaattc gggttgagta tcgattaaag acaataggta
    59881 gtccaacaca tcttgatctt gagtgaaggt acggtaaatc gccattttct cttcgttacg
    59941 agcaaggcgg ttataatgag taagcatata atcagcaata atatcagctt tactcacgcc
    60001 taaaatacca agcagtaaca ttgcaccgaa accagtgcga tctttccctc cacggcagtg
    60061 ttgaaccaat ggtgcatttt cagggtctgt cgccaacctt aacatttcag caaaggcggt
    60121 ttggcattct gctttttcga caaaattacg atattgtgcc attacaatgt cgtagcgatt
    60181 gataagatta ccttcagctt tttgagcaat gattttattg accaaattac gatcttcatc
    60241 gtgcttgtct gcactaaatt gggcagcaag ctcggcagta tgtgcattcg gatcaagccg
    60301 aaaagtttgc tctctgccat taattggggg atttgggtat ttggcgactt cattcgggct
    60361 gcgatagtca ataacagtct gaattcccaa tttatcaaga taagccacgc cttcgtctct
    60421 taaattatgc agatgatcgg agcggtataa cttgccccat ttcactcgct tgccctgatg
    60481 agcgacatag ccccccatat cccgaaaatt attcattccg gcaacaggta aggtgcgttc
    60541 agcaacaatc tgttctccgt ttgctgattg aatgaggaag aacggacggg cttcacaagc
    60601 gctcaatttc agctcaaact ctgccaaatc agtctccgcc agccatttgc tatccttact
    60661 gtcagggttg tccagaaaga aaatctgtac cgattgagcc ggctgttggc ggaacaggta
    60721 tctgccctgt tccaaccgaa taatgtcata cacactgtcc attagccgag tattcctgca
    60781 tagactaagc cgatacagat ccccatcgta gcaaggatca tcgttgcagc atatttgccg
    60841 ttagttttct tcaaaatcca gtagatcacg acagttaaaa gtaagctgag tagtcccggc
    60901 atcactttat ctaacatctc ttggaattta atcacattat caccagcggc aatttgtgaa
    60961 actactttga ctttcacaac ggaggcaatt aatgcgccaa tcaccattaa accaaccaca
    61021 tttgccatat tgccgagtcg ttgcaaaatg ttattacccg caccgtgaat taaatcaacc
    61081 cctttgctgt aacctagatg gataccgtaa tacttcgtcg caatgtttac actgttatac
    61141 aacaagaaca ttaaaatcgg gcctaacaca ttgccactta gtgccaatgc cgccccgata
    61201 ctaccgcaaa tcggtaacca ggtgaatttc aacaagctgt ctcccagccc tgctaacggc
    61261 cccattaaac cggttttaat cgcggttact gtctcttttt catcctcttt ggtagtctct
    61321 tctaccgcag cggcaattcc taaaatcaat gcatcagaat taacgtggct gttaaaaaat
    61381 tttaagtggc gtttcattgc ttccgctcgt tcttcctgtg gacgatcttt ataaagtcgt
    61441 tttaataccg gaataaagct acttaaaaat ccaatcgcct gcatcgattg gaagttgttt
    61501 gtgacgttca gcacctgcat ccgccaaaac actttgttta aatcttgttt ggtaatttta
    61561 ttgctcatag gtcataatcc tcttcatctg cggttttggt tggtgcagct tcagcttttt
    61621 tgcttactgc taagtcgtaa atcaacgcaa gcggtagtgc aattaaggta atcggcaata
    61681 ctgataattt gagataaacc gccaacgtaa agccagcaat taagaacgtc caaagttcgg
    61741 ctttcttaat catcattaac atcagcaaac cgataccgat ggcaggaata attttgcctg
    61801 caacatttaa tccggtaatc acttttgccg gcagagcaga gaccgcttgg gcaataatgt
    61861 ccgccccgta atagacggct aagaacgttg gaatagcacg aatagaaaag gcaattaaca
    61921 ttgggatata gtgaatgcgg aaaatcttgt caaaatcacc gcttgccgcc cagcgttcag
    61981 caattgggtt caatgcacat acgccggagc ggtaaagaat gagtaactgc tgtgccaaga
    62041 gtgaggtcgg tactgcgagt gcaaccgcag tagaagcttc accagcagca ataccaagtg
    62101 cggtgccaat agcggttccg gaaatcatat ccggtgcaga atatgcacca acattgccga
    62161 tccccatcca catcacttca agcgtagcac caataatcaa cgccgtttcc aaatccccca
    62221 taatcaatcc gaccaccggt gcgattaaca acggacggcg gatcatctgt gtgccaatat
    62281 catctaaggc acaaatacct gcccagcagg caacaagtag tgcagtcagc atagctagat
    62341 aatctcctgt aagttaagtt tttcatcatt cggtaccatc tgtaccgtta cttcaacacc
    62401 cttttccaat aaggttttaa atgcttgacg ctcttctggc gtaactgaaa ccgctttact
    62461 taactgctca cgcctagctt gataacgcat tccgccgaca ttcaatttgt caatcgatac
    62521 acctagttct acagtgcgta acacatcaat gctattggta aacaacaaca tagtacggcg
    62581 ggtaatttgt gtcttctgca acacttcacc aaatttttca atgccaaacg cgaccacttt
    62641 aattccctgc ggtgctgcca tcgttaaaat ctgtttttgg gttggatccg ctgccaccgc
    62701 atcatttaac acaataattt gttcaatacg gtgtaaatta acccaagtgg tgactacttg
    62761 accgtgaatt aaacggtcat caatacggct aaagcagatc atcatcgtcc tcctgtgaaa
    62821 caaaatcttg ttgtgtgcgt aggctaaatc cgttttggta tgcaagcggt agattttccc
    62881 gaatttcttg caaattgccg tcacggctca tcagcacttc tagcaataaa ggtaaattca
    62941 aacccgaaca ggcaaaaaca ttagggtggg ttaattgaga agaggcaaga ttcatcggcg
    63001 taccaccaac aatatcggtg agaataatca agcctttgtc ggtgtttaac tcagcaatgg
    63061 tttgctccat ctgccgttta atgtccgcta cattatccac tgctactacg ccgatagctg
    63121 ccacattttc ctgctgcccg acaatcagct cggcactcgc caacgccgcc ctcgcaaaac
    63181 tgccgtggct catcaacaat aacgcaattt gattagacat aagtcactcc ttgatttata
    63241 agtcattcta ttaaataaaa tgttatacag ataaacaagg gaagttattg cacgatatat
    63301 cgtacacata agaagaaata taaagtgaca acagattaaa gtaggctact atataatagt
    63361 aataaaaaac agtaagaaga tattcctact gtttataata actcaagaat ctttcaagac
    63421 atcctctaac actctgattc cttgttctat ctgttgttca gagatcatca gcggtgggag
    63481 tagccttaac ttgcttttag cggttaaaaa cagcacacct ttgttgatac attttgcaac
    63541 aatatcagcg gctaaaatgc cttcctcaaa ttctacgccg agcattaaac ctaagcctga
    63601 aacggattta acttttggta agctcgctaa gcgttgctgt aacaactgcc ctttttgttg
    63661 cacttgggcg agaaattcgg cgtttatttt atcgattact acatttgcag cagcacagga
    63721 aacaggattg ccaccaaagg ttgagccgtg gtcgcttttg cctaatgtca tttccacttt
    63781 ttcgcctaac aggaaagcac caatcggcaa gccgccgccc aagcctttag cgagcgtgac
    63841 taaaccagga gttaaatcaa attgttgata agcaaaaagt gtgcccgttc gcccaatgcc
    63901 ggtttgcacc tcatcaatca taaataaaat atctttttct tggcacaggc tttgcacggc
    63961 gtgcagataa tccgcctcta atgggcaaac accgccctcg ccctgcacca cctccagcaa
    64021 aatcccgcaa acgttctcag tttccaagcg agctttcagt gcctcaatgc catttacagg
    64081 taaatattca aagccctctg taaaggggaa aaaatgcttg tggaatacct cttgcccagt
    64141 ggatgcgagg gttgaaatgg ttcgtccgtg aaaagagttc acgagggtta aaaccgttga
    64201 acgaccggaa ccgtatttgt cgaaactata tttgcgggcg gttttaattg ctccttcatt
    64261 tgcctctgcc cctgaattgc aaaaaaatgc ccgttttaga ccgcttgcag ccactaattt
    64321 ttgggctaat tggcttgccg gttcggtaaa aaacaggttt gaggtgtgag ctaatttgcc
    64381 ggcttgtgtg gtaacagctt gtagccaatc ctcatccgcc cagcctaaac tatttacccc
    64441 aatgccactg gtaaaatcaa gatacttatt gccctcaaaa tcccacactt cacagccttt
    64501 tccgtgcgac agtgcaaggt caaatctgcc ataggtttgg gcgatataat ccttatctaa
    64561 ttgcttaatc gtattactgc ttgtcatttc actttcctgt tattttttat aaaaccgtgt
    64621 gccgtttttg ccaccgaaca tttctaccaa aatggcgtgg tcgattcgcc cgtcaataat
    64681 atttgcctca gagccaccag ctctgatgaa atcggtacag cacgcaattt tggggatcat
    64741 cccaccggca ataatgcctt gctcaatcag ggactgcact tcgcttactt ccacttccgg
    64801 aattaaggtg ctttcatcaa agcgatctcg caataaacct gcaatatcgg tcatcgagac
    64861 caatttttcc gcttgtaacg caatcgcaat ctcgctggca gcggtgtctg cattaatgtt
    64921 ataagcctgc ccgttttcat caacgcccac cgtggaaaca accggaatca agcccgcatt
    64981 aagagcaatt tcaatcacag ttggatcgac tttcacaata tcgcccacaa agccgtaatc
    65041 cacctctgcc tctaattttt tgcattgcaa catcgcccca tcaataccac acagcccaat
    65101 gcctttccct tttaataagg cgacaaggct tttattaact ttgcctgcca acatttgcaa
    65161 aaccacgtta atcgtatcgc tatcggtaac acgcaacccg ttgataaatt gcggttcttt
    65221 acccaataat ttcacgcctt gtgaaatctc cagcccgcca ccgtgtacca gtaccacttt
    65281 tacgcctaaa cgatgaagta acagcagatc tgccatcact gattttttca gttcctcatt
    65341 aatcattgcg ttaccgccat atttcaccac aatgatttta ccctgccatt tcaccaaaca
    65401 agcggtggat ttttctaata aatttgcaaa ttgattgatt tcttgttgtt gcatatttct
    65461 ttctcttgta gggacgggtc ctgtgcccgt ccgaatatgg gcgatgatta tcggacaggc
    65521 acaggacctg tccctacatt tatatttaaa gctctaaccc ctcaacctca tctcttccca
    65581 acataatatt catacactgc actgcggcac ctgatgcccc tttgcctaaa ttgtcaaaac
    65641 gggcagcaag taaaagttgg gtgctgttgc cgtaaataaa aatctctaag ctgtctttac
    65701 ctgcataagc attcgcggca agcattccgt cttcgggtag agattggaaa gggtgaacgt
    65761 gaattagtcg gctggtttgg tagtaatcgg cgagcaaatt tgcaatttct tcgccggatt
    65821 tgaccgcttg taaggcgaag atctgcaatg gcacagtgac taacattccg ctgtaataat
    65881 cagcaaccac aggggtgaaa atcggtgggt tttgcatttg ggtaactgcc tgcatttcag
    65941 gcaaatgttt gtgttggaga gttaaaccgt aaacacgagg ggcattgaaa gcatttgggc
    66001 tgttttcatt ttcatagtca gcaatcatcg ctttgccacc gcctgaatag ccggttaagg
    66061 aatgacaact taaagggtaa tcggcgggca gaatcccttt ttccaccagt ggacgaacca
    66121 acgcaatata gcccgtggca tggcaacccg gcaccgcaac acgcttggca ttttggattt
    66181 tttcacgttg tccgctcaat tccggaaaac cataaaccca attaggattg acccgatgag
    66241 cggttgaagt atcgcaaatt cgggtatttt ccggtgcatt tgctactaat tcttttgagg
    66301 cttcatccgg caaacagagg aaagttaaat ccgcctctgc gacttttgcc acacgggcgt
    66361 tcaaatcttt ccgctgctct tcgggcaagg ttaataattc aatatcgtcc gcttggctta
    66421 aacgttcgtg aatgcgtagc ccggttgttc ctactgcccc atcaacaaaa atcttgtatt
    66481 tgctcattga aaatccttct ttgacttttt ctgctcggta gtctaaggct atttaaggct
    66541 aaactcaagt ttatttttga ataattattc acattaattg attttatatt caaaaatccc
    66601 taacaaaatg ttagggatta aaaagagtat taaaatctat tcatatcaag cttcagggct
    66661 ttttgattcg ctttttggta agcagggtga ttttccacct gttctaaata gcgtgcaata
    66721 ttcgggtaat ttgccatttc aacaaaatta cgcccccatt gtagtgggaa acagagagaa
    66781 aaatccgcac cggttagttc atcacccaca atccattttt tatctgaaag tgtttgctca
    66841 atatggttaa aatacagcgg agtctgcgct tttgcgtagt cgccaaaagc tccgagatca
    66901 gagcgattag ccaacattgt cacaaggttt gccgagaata atgaagcaga aatcgacaac
    66961 cagtagtgat acattgaata ggcttcgcta ccacgagtcg gctcaaattt cccttcggcg
    67021 taacgggcaa tcagatgctg gataatcgca ttgccttcgg caagcaccaa atcgccatct
    67081 tgcaacacag gggctttgcc aagtgggtgc aaggctttta cctccatagg tgcaaaaccg
    67141 ctctcttcac gatggtagat ttttagctcg taatccaagc ctaaggcttc caacaaccaa
    67201 acgatgcggt gagagcagga actgttcagg taatgtaacg taatcataat ttttctcctt
    67261 cagataattg aaaaaatgcg gtcacttaat tgcaaatttt tacaaaaaaa tgaccgcttg
    67321 tctgtaatga ttaaatatcc attggttgcc cgttttgccc tttaagcggc ggtaaccaag
    67381 caccaccttg cacgcagtag ccccatagtc tatcgggaat gccgtagtgg tcggcttgtt
    67441 gcgggtcgag ttcgctgaca atctcactgt ctcgattatc tttcaacaag gtcgccacgt
    67501 tcgggttgag cattaccgct ttacctaagg cgataaattc tgcccagcct gttgcataag
    67561 ctttacggat ctgttcaccg gttaataagt tacccacgcc gatcagcggt aaacgcccgt
    67621 tgatgtgttg gtgtaccagt tgcatacggg tgaagttggt atctgcacca cggcgggctt
    67681 ttttgccgaa atcccagagt gaaatgtgca agtattgcaa cggcttttcg cacaaagcat
    67741 caatcagggc gtaggtatcg gtcatggtta agccgtgttc gcccggctct tccggtgaga
    67801 aacggtagcc gataataaaa tcagggcgtt ggtgtttttc acgcacgctg accgctgcct
    67861 caaccaccgc taacgggaaa cgcaagcgtt tttcaaggct accgccccat tcatcagtgc
    67921 gttgattaaa ttcagtagag aaaaattgtt gaattaaata gccgttcgcc ccgtgaattt
    67981 ccacaccatc aaaaccggct tgaatagcta aatcggtggc attagcgaaa gcttggatca
    68041 tttgcttcac ttcgtccgcc gttagggctt tagcaccgtt ggcgtgctcg gacggcgcaa
    68101 ctgcattcgc cccgtcaagc aaggcaggaa tagcttgtgc cccaccgtgg aaaatttgca
    68161 aaatcgcttt ggtgccttga tttttcaaga tattggcagt ttctgtcagg cttgccaaat
    68221 agcgttcatc aagagcttcc ggctgaccgt aaaacgcttt gccgttacgc attaccccgg
    68281 ttgctgcggt gataaataag cccatatctg ctgcacgatt atgcaagaaa tggcgttctt
    68341 gctcgctaat tgtgccgtca tcgttggagg cggaatgggt cattggggca actacaaggc
    68401 ggtttttaat ttctacatcg ttattcagag tataaggggt aaataaattt atcatcgtat
    68461 tctcctaaaa aatacggttg atttcgcaaa tttttgcgaa aaatcaaccg cttgtttatt
    68521 accaatgtaa ggtcgcactc tcttccaccg gcacacgccc taaatggtgt ttgttctgca
    68581 tagcgtccca atctgggtgt ccgaaagaaa tggcgtggag gagcttgtaa tgttcaggaa
    68641 tgcctaactc ttcacgcaca tctttagcaa acatcgcaag ggcaagctgc ggaatgccgc
    68701 caaaaccacg agcggtgagt gagagcaaga aagtttgcga atacatacca acatcgctgg
    68761 caatattgac atcgtgtccg tcaatgcttg gcataaatag gaatgccata tgtggcgcac
    68821 cataaccgac aatattgtca tcatacacca cttggcgacc ggctttatct tcacggggaa
    68881 tgccatagct ggtggtaaaa acgtggctgt attggttacg ccaacgtggt tcgtagtcac
    68941 cggtaaattt cgtttgattg aactcaaaat ccgcatcatt aatgcccgct tcaaaagtct
    69001 ttttaaaacg agcttttaag cgtgctagcg tttcaccaga ggcaacgtgt actaaccacg
    69061 gctgtgtatt acaagccgaa ggggcatttt gtgcatcggc aagaatttgt ttgatttcag
    69121 tttccgtcat cggaagcggt aaaaacttgc ggattgattg tcgtgttttt accgtggttt
    69181 caaaatctaa cattttcatt tcccctattt attttttata agtcaaattc actcacgact
    69241 ttaacgtgta aacgcacatc tacattacca cgggttgcat ttgaatatgg gcaaacttcg
    69301 tgtgccttgc taattaaagt tttcgcttct tccgcactaa tgccttccac agtaatggta
    69361 atatctaaat ctaagccgaa agcaccatca gctttttgac caatcccaac tgcaacagtg
    69421 gtactggatt tggttggctt aatgcctaag gttggggcaa cgtgattcat tgcactgtca
    69481 aagcaggcag catagcccat tgcgaataat tgttccggat tagtgcctac tttgccactt
    69541 tcattttgga aaccgactaa atcaaaaccg atagaaccgt catccacttg ggttctgccg
    69601 tcacgaccac cggttgcagt tgctgatgtg tgataaaaaa ttttcatatt ttgctcctat
    69661 taaatgcttt atttgattgg ggatattatc cgctttttgc tatttgtcgt cttgcctgat
    69721 tttctataaa atatgcctaa ttttctaaaa gtgagattat tatgcaaact catcgagcta
    69781 ttattgaatc tatttttgcc ctcgctccga aaaatgaact ttgggctact cccatttcag
    69841 ggctaaccgt tcacgctgcc gatcgttcta ttagatttaa cggttatatc caagacccaa
    69901 gtttatgtgt agtattatta ggcgagcggc aaatctgtac caatggacat tgccaagtct
    69961 tcggtaatca ggaaatgatg ttttgccctg tgaatttgcc gattgttacc caaaccttat
    70021 cagttgcaga aaatcagcct tatcttgcga tttcactacg cttggatttt gatcttattg
    70081 ccaaaattat cacgcagctt cccccacaga aaataagtga aaacattaat caacgcacta
    70141 aatgggagct ggagaatgaa attaaagact gtttgttacg cttactaaat ttgcttaatt
    70201 ctccaaatca tattcatttt cttgcaccat tgatattaaa cgaactctat ttctatttat
    70261 tacaatctga gcaaggtggc tatatacgct ctctactctc tcaagatggc aatattgcta
    70321 aaattgccaa tgcaacaaaa atcttagaaa gaaaatttgc cgatacacta aatatgtcag
    70381 cactggctga agaggtagga atgagcgtgg cggggtttta cgctcatttt aaaagcgtaa
    70441 cttcaatgac accactgcaa tatcagaaat cgttaagact aaatgcggca agggaaaaac
    70501 tacaagcagg agtaagcgtg agtgaaaccg cctatcaagt cggctatgaa agcccaagcc
    70561 agtttagtcg agaatataaa aggcagtttg gcgaaagccc gaaaggaaga taaaggaaga
    70621 atcaaaaata acaagcggtc aaattctgca aattttttgc aaaatttcac cgcttgtcag
    70681 gttagaaatt actgcttatc gccaattaat actgactcta acgcaatttc aatcatacca
    70741 ttaaaggtta attgacgttc ttcagaggta gtttgctcac cggtgcggat atggtctgaa
    70801 acggtgcaaa ttgctaatgc ttttgctcca tactctgccg ctaccgcata aatgcctgct
    70861 gcttccattt ctacgcctaa aatgccgtat ttttccatta catcaaacat ttcgacatca
    70921 ggtgagtaga ataaatcggc tgagaataaa ttaccgaaac gagcttcaat gcctttcgct
    70981 ttagctgctt ggtgagcagc taatgtcata tcaaaatcag caatcgccgc aaaatcgtta
    71041 tcacggaagc gaatacggtt tactttagaa tcggtacaag ccccaacacc gatgacaata
    71101 tcacgcactt tgacatcatt acgtaccgca ccgcacgagc cgacacggat aattttcttc
    71161 acgccatatt cagtaattaa ttctttagcg taaatcgagc aagatggaat ccccataccg
    71221 tgccccatta ctgaaatgcg gcgaccttta taagtgccgg tgtagcctaa catattgcga
    71281 acattggtca cttcttttgc atcttctaaa aaggtttcag cgatatattt agcacgaagc
    71341 ggatcgcccg gcataattac aacgtcagcg aaagcacctt caggtgcgtt aatgtgtgga
    71401 gtagccattt tatgttcctc tttattaatt aataaccttg aacagcttgc tgctgttcat
    71461 cattcaatgt tgctaataaa ttagctaata aacttgatgc accgaagcga aaatgtgatg
    71521 cactcaccca gtcattgcct aaaatagatt ccgcaagtgc aagatattgg gcggcttctt
    71581 ccgaggtttt taccccacct gcagctttaa agccaacacg gtctgccaca cctaaatcac
    71641 gaatggtttc aagcataatg cgggcagatt caagggtagc attcactgcc accttgccgg
    71701 ttgaggtttt aataaaatca gcccctgctt gaatcgaaat ttcgcttgct ttgcgaataa
    71761 gctctgctga ttttaactcg ccggtttcaa taatcacttt aagcaacaca ttattggcag
    71821 cacaaactgc tttgcattgt tttaccaagt cgaaacctat ttgctcatta cctgcaatta
    71881 atgctttata agggaatacc acatctacct catctgcccc ataagcaact gcggctttgg
    71941 tctcagctac cgcaatttca atatcatcat taccgtgagg gaaattcgtg actgtcgcaa
    72001 tttttacttg ctcgatacct tgctgtttca atgctttgcg ggcaatcggg ataaaacgtg
    72061 gataaatgca aattgctgcc ggtgtgccaa acttggtgtt cgcttgttgg cataatgcga
    72121 tgactttctc atcagtatca ttgtcattta atgtggtgag atccatcaac gaaagagcaa
    72181 tctcagcgga tttttttaaa ttcatagtgt ctccttttat taaatgcgtg gtggttggta
    72241 aaattttata aaaatctgac cgcttgtaaa tagacaaacc aaaagcaacc gtttacgtca
    72301 gataaaaaaa gataaaacca ctatttctag tggttttata caaactggat tagagaactg
    72361 ctccacccaa gccgataaac aagccggcaa tggttgcact cattaagttg gcaagtgagc
    72421 cagcaatgac ggctttaatc ccaagtcggg caatatcacc acgacggctt ggagccattg
    72481 ccccgatacc accgattaaa atcgcaatcg agctgaagtt cgcaaagcca caaagtgcaa
    72541 aggtaataat cgcaacagtt ttatccgtta aatgtacggt tgactcagga gctaagtatt
    72601 tagcaaactc taaataaccc acgaattcat ttaccgctaa ttttaagccg atcatctgcc
    72661 ccgcaatttc tgcttcttcc caaggcacac cgattaccca cgcaagcggt ttaaataccc
    72721 agccgaaaat ttgacctaag tttaaggtat cataaccgaa ccagccgcca atacctccta
    72781 aaataccatt cactaatgca attaacgcca cgaatgcaat taacattgcc cctacgttta
    72841 atgccagttg catacctgaa gaagcacctg aagctgctgc atcaagaata tttgccggtt
    72901 tttctaaatc taccgcttct agttcatcac ggaatttttc ggtttgtggc accataattt
    72961 tggcgaataa taaccctgcc ggagccgcca taaaggaggc tgcgattaag tacgttaatg
    73021 gtacgcccat tcctgcgtaa ccagccataa cagaacctgc aatagaagct aagccccctg
    73081 ccataatcgc aaagagttca gattctgtca ttttgctgat ataaggtttt actaccaatg
    73141 gagcttcagt ttggccaacg aaaatattag ctgccgcaga catagattcc gctttagatg
    73201 tacctaatgc tttttgtaat aaaccaccta aaatacggat tacccattgc atcactccaa
    73261 tgtagtaaag caaagaaatg agtgcagaga agaaaataat caccggaagt acacggaaag
    73321 cgaacacaaa gccgccgccg ccaaatactt caaacatttt gtcgctgact aagccaccga
    73381 ataaaaatga aatcccttca ttaccgtaag aaatcacttt tgacacacct gttgccatcg
    73441 cattcaaggc atcacgccct gccggcacat aaagcaccaa tgcaccaata gctacctgca
    73501 atgctaatgc gcctaatacg gtacgcacgt ttattgcacg tttattgctc gaaaataaaa
    73561 atgcaatgaa tagtaaaaca ataatgccta aaaagctgtt aagagtaccc atagaacctc
    73621 taattataaa ttgattaaaa aaggtgacga tactatacct atttttaggc aaaaaatctt
    73681 gtgaaattat catcattcaa gacaaaattt gacaaaaact aaattatggt attttattat
    73741 tcatcacaag cagtcaaatt tatcgaaaaa tttacaatta tagagaggta atatgcaaaa
    73801 tattcgtgaa atttacttag ccggtggctg tttctggggc gtggaatctt ttatgcaacg
    73861 gattaaaggt gtcattaagg cacaatcagg ctatgccaac ggtaataccg ataacccaag
    73921 ctatcaagag gtgtgtgccg gtagcggaca cgctgaagtg gtaaaagtga cttatgatgc
    73981 caatcaaatt agcttggcaa aattactaga ttacttcttt aaagtaatag acccggtgag
    74041 cattaacaaa caaggtggcg acatcggtat tcaataccgc accggtattt attataccga
    74101 cccacaagac gaaccggtgg taaccgccgc acttgcacaa ttacaaaccc aatttgatca
    74161 gccgctggca gtggaaaacc aaatgttaga gcaatatttc cctgccgaag agtaccacca
    74221 agaatattta gtaaaaaacc cgaacggcta ctgccatatt gatattcaat taatgaatga
    74281 gattttgaag aatcaataac aaaaaaccac agagcaatct gtggtttttt tagctttatt
    74341 ttctgagcaa accgtacact tttttcagtg ctgaaaccgg taataaacga ggaattgcac
    74401 gcattatgaa aatcccaaaa cctgaaatcg gatcgtgaat ctggcagcgg ttttttaatt
    74461 tatataaacg ccattctgcc tctgcttggg ccattccacg gcgtctgcca accattccgt
    74521 taccgactcg ggcatacact aataaatccg gcaagtttgc cacttgttta aattgagcaa
    74581 tgagtttgat ccataaatag taatcttctt gcagatcttg atagccaccg acttccaaca
    74641 ctttggattt ctgataagca accgtcatat ggttaaacgg gcaacgcaag cgagtgaatc
    74701 tgacgatttc ctccaccgtg gttggtacat tgcggtaagc gacaagatcg tgaatatctt
    74761 gcccaaattc agcaatttgg ccgccaaaaa tcacggtttc aggattctgt tcaataaatg
    74821 ccacttgttt ctcgaaacgt tccggcatac aaatatcgtc tgtatccatt ctgaaaaccc
    74881 attcattctt acaataggtt agcccatcat ttagcgtttt acctaaacct cgattttgtg
    74941 ggaatttcac cgcattaatc ggcaaaattg cactatattc ttctacaatc gcctctaatt
    75001 caggcgtaac tgcaccatca aaacaaacaa cgatttcatc agcctgcaca gtttgtactt
    75061 tcaagctttc aaaacattct cttaaatatt gcggttgctc tttaatgtat aacgacatta
    75121 aaacggaaaa tttcattaca taaacctttt caaattaatc gccaacttcg gcgaaataaa
    75181 aataaccaac gcaataatca gttgtttgat atttttagtc tgtttaaaca tctcaaaata
    75241 ataaccggct gccttgcggg ataaattcat tacgtgtgga taacttaaaa tataaagcga
    75301 attgagctta aaattattcg cctcaggtgt tttgatatac gtttgttgaa tatactcaat
    75361 agccttttct gtattagtgg tatcggttga aacactggag cgtttggtat ggaaagtaca
    75421 ataggtcaag gcttcgtcca catacaatgg ctcaaaactc ggttcttcca ataatttcag
    75481 taagaaatca taatcttcaa gtgatcgcaa gcggtcagat aatccaccaa ttttacaaaa
    75541 gagtgatttt ttcaagccaa tcatcggcat tccgccaatt ttattcgctt ttagaatgtt
    75601 ttctttagtt agctcacttt tatgtttaaa cggcttggtg acataagtaa aaccctcatt
    75661 taccatttca cattttgccg ggtggtacac aaaattggca gttggattgt tcgcaatctc
    75721 tgccgctaaa cgttcgcatt tttcaggcat aaagcggtca tcatcatcta aaaacagtag
    75781 ccattcttgt gtggcattag ttgcccctac atttcggctt tgtgccgccc caacatttgg
    75841 gttatttcgc accactttca catcaaatgg atagctataa atatgagata aactatctct
    75901 agtaagtaat tctcttactt tttctttagt agaaatatcg ttaaattcat ttaaaattcc
    75961 taaagtttca ctgaccggta tttttgagca gtcatcaaca atgatcactt caaaattata
    76021 tgcagtttgt tgctttaaac tctcaagcaa cgcattgatt tcttgattac ggttataaga
    76081 aggcacaata atactaaaca tattcagcct ctttgttttt gcaaaaaaat gttacatttc
    76141 gaccgcttgt tccaaacagc gacaagaaca ttagaaacag catcatcagc cccgggaaag
    76201 caaaggtatc tgctttaata tttaaaatag ctaaaatgcc gatggtggat aaggtaaaaa
    76261 tccaactgcc ttcaaaccaa ttcaccgcca ctttgcgtac aaaatagtaa gtgaaggcaa
    76321 aacacgccaa catataactt actccaccat ataatacttg gcgaatatag ccggaatccg
    76381 atccaccata atagccacca gtttcggtgt aatataaacc atcaccggaa ataaactgat
    76441 ttaaagtcgg taaaaacaga tggtttttca ctaaattatc ggttgaagag ctgacttttc
    76501 cggtgccgga caataaatta attaccggtt ctaaggcgtg ttcaacataa cggttttccg
    76561 gaaaaacaat cgccaaaaat agaattaacg cagtgaaggc aatcagtggc aatatatatt
    76621 tccatttaaa atagagtgca atacttatta ctgacattaa taaaaaggtt ctaccggaaa
    76681 ttaaaccaac acataataat aaaaataaaa accactcatt caccacatct gtttttttat
    76741 tatatgccaa taaaaaatgt aatagcatta aataaaaaat gcttaattgg aaaaaggcgg
    76801 aagaagtgat gttatataaa cggtattctt gttccgaacc aaaaaaacgt ggcatcattg
    76861 cattgctgga taataaaaaa tccaccataa acggcaaacc taataaggct gtcacaccac
    76921 aaatccattg aatagcaatg ccgattttta aatcacgaac gaataaagtt ttaccttgtt
    76981 ggttatgata aaaaacatta taaatcgcaa tcccgaacac aaacaaaatc agcattttga
    77041 catacattgc cagcacacca atttcttttg tactgttaat caataatgga ataatgctaa
    77101 agccgattaa tgcaataatt gcaatcaggc tatctttagg aataataatg ccattcgatt
    77161 tgcccttgat tatttggaaa accaaatagc cacaagcaac aagcccgact acaaacgaca
    77221 ttcttaaaaa atggaaaaac cacggatcgt aaagataaaa taagttaatg agtgctgaca
    77281 tttcagacct attatgaatt tcgctgagta aaattacgtt taattgccag taatttttta
    77341 agtggatatt ttacg
//
LOCUS       DANMCL010000002        63465 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.002, whole genome shotgun sequence.
ACCESSION   DANMCL010000002 DANMCL010000000
VERSION     DANMCL010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 63465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63465
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.002"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            53..1531
                     /gene="fruB"
                     /locus_tag="PXF40_000070"
     CDS             53..1531
                     /gene="fruB"
                     /locus_tag="PXF40_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HDL5801457.1"
                     /translation="MLNLSAKNIRLNGSASNKEEVIRFVAAELVAKGNVAAGYEVGML
                     NRETQTSTFLGNGIAIPHGTLDTRDLVKETGVQIIQLPQGVEWGEGNTAYVVIGIAAK
                     SDEHLTLLRQLTTVLSDEEAAATLAKTQNLDEFIAVLSGKKNLPALSQELISLNIESS
                     SPITLSAINAAKLQEQGYVSQAFISDVVANKALHLGNNLFVVDSAKGNQANGIAIARN
                     TQGQTLLTVAETDNALQPLLTQLLKPEVRSQFAHFSAEQMLGLLKGESVASTPVTNVE
                     ASGNQVVGTFTIRNDNGLHARPAAVLVQTVKPFSSKISVENLDRNTAPASAKSAMKVV
                     ALGASQGHRLRFVAEGEDAQQAIEALQQAIINGLGESVSFVPAVADTIESIAVSAIPA
                     EETATAVDANTKEATFVIKNEHGLHARPSAVLVNEVKKFNAKIEVQNVDKNSPLVSAK
                     SLMKIVALGVTKGTTLRFVASGDDAEVALAAIGAAIEAGLGE"
     gene            1545..2489
                     /gene="fruK"
                     /locus_tag="PXF40_000071"
     CDS             1545..2489
                     /gene="fruK"
                     /locus_tag="PXF40_000071"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HDL5801458.1"
                     /translation="MRIATVTLNPAFDLVGKLQRIEIGEVNTVETLGLYPAGKGINVA
                     KVLADLGTKLSVTGFLGEENQGDFVNAFKHNDLADEFYRINGKTRINVKITETEADVT
                     DLNFLGFEISESDWEKFVTLSHQWESKFDLVAVCGSLPRGVTPEKFASWLESLHRQGL
                     KVVLDTSNAALTAGLTAHPWLVKPNRRELEVLVGHSLNSIEEIISAAKQLRSRGIENV
                     IISMGEQGSLWLNHEGVLQARPPRCENVVSTVGAGDSMVASLIYGLSQGWSKEQTLRF
                     ASATSALAVVQSNVGIADRAALDDIIKQTDITVISENH"
     gene            2515..4179
                     /locus_tag="PXF40_000072"
     CDS             2515..4179
                     /locus_tag="PXF40_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5801459.1"
                     /translation="MNISFVFPQTLGNARRFLVNEMLSAAAKQQGHNVVAANQADFVV
                     LFDNAIPQEAAGKQGAILDLEQAFAQPEASLKQAVENAQTFANATATTAVSAVSSGVK
                     NIVAVTACPTGVAHTFMSAEAIENYAKAQGWNIKVETRGQVGAGNPISAEEVAAADLV
                     FVAADIDVDLEKFKGKPMYRTSTGLALKKTTQEFEKAFAQAKIYEGGVAKADNAEAPT
                     SEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGG
                     AAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFL
                     NGAIQLPASLTSLKPILILPLLGSAIVGLLMIYVINPPVKALMDALVEWLNTMGQTNA
                     IILGIILGAMMCTDMGGPVNKAAYTFGVGLIASQQYMPMAAVMAAGMVPPIGMAIATL
                     IARSKFNTNQRDAGKASFVLGLCFISEGALPFVAADPVRVIASSILGGATAGAISMAL
                     GITLQAPHGGLFVIPFVSQPLMYLAAIAIGSLVTGVVYAAIKQKAE"
     gene            4346..4864
                     /locus_tag="PXF40_000073"
     CDS             4346..4864
                     /locus_tag="PXF40_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lhr family helicase"
                     /protein_id="HDL5801460.1"
                     /translation="MILLRGDTMQFIEFTDPDSGISYQYSEFTIANVAFIINFCSDAD
                     VISTLSALGKDITNYINTYSCCTIKFMAKEHLENSGSNIDIYAPAANHQFKRKEIIAL
                     QETLERLLFEHYVRFTPESYLFIAERDSLNRMYQRMCVPRCDFMQSFQVVYPLGVNQD
                     CFILITPKGNLK"
     gene            complement(5017..5880)
                     /gene="rarD"
                     /locus_tag="PXF40_000074"
     CDS             complement(5017..5880)
                     /gene="rarD"
                     /locus_tag="PXF40_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5801461.1"
                     /translation="MLKGILASLAANVLFGAVYYFAILLRPLEGEAMFGFRIVVVIPF
                     ILLAIILFKQQSAFADLLQKIRQNPPLVLVILLLALNTGVQLWLFLWAPNHGQALQVS
                     FGYLLLPIVAVALGKMVFKEHFTRLKWLSLLFAVIGVGSSLFFNSTISWATWVAGLGY
                     PLYITLRRYFQINTLATFFVELLLVLPVALYYLSQVEMTPIVAENPQIYFYLGLLGLV
                     SGSAFILYILSSNLLPINVLGLLGYVEPLVMLLISFAIGEKLDANSYILMVCLLVSIG
                     LLSWDSFRSKV"
     gene            6058..6642
                     /locus_tag="PXF40_000075"
     CDS             6058..6642
                     /locus_tag="PXF40_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HDL5801462.1"
                     /translation="MKKIFWILLIAMLAVGGYSLTKYNDLMRAEEDINSVWGNVESAY
                     QRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDPSNATEEQMAKFQEAQQ
                     GVNSALSRLLVSVEKYPELKAHEAFLNLQAQLEGTENRINVERNNFNEKVKEYNKQVR
                     EFPTKLAAMIMGFKAKPQFKSEAGSDKAPTVNFN"
     gene            6724..7182
                     /locus_tag="PXF40_000076"
     CDS             6724..7182
                     /locus_tag="PXF40_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5801463.1"
                     /translation="MGLFSFLSNKLPIDTQRIEQAIADLEQKTSAELRVVVERKAKIG
                     KTDNAAMLRASELFDELKMRETAEHNGVLIYLSFKPHYAAIIGDEGIHQKVDNDFWQK
                     IYATMCLDCQQGDYTQAICDAIKMVEAPLAHHFPYQADDKNELSNEVVVK"
     gene            7179..8036
                     /locus_tag="PXF40_000077"
     CDS             7179..8036
                     /locus_tag="PXF40_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HDL5801464.1"
                     /translation="MMKSLCKFLSIFNRLLLVCLALFSLNATAVTYPEPPNPFYYITD
                     YTKNTLSQQEWRTLEDALIANCAKTSSQIAVVIIPSTEGEAVSTYAHTLFNKWGIGRS
                     KNNENNGILLLIAKNDRKLFIATGRGLEGALPDAIASSIIRNDITPFFKQEQYAAGIA
                     HGLSAIMAAINGEYAPYASYGEEMQEFDDIDGLLFFLFAGIVIFLIFRPRGNSTYISP
                     SSMDQLGQILRESQRRGGGFGGGLGGGFDRGSGGFGGGFGGGFGGSRGSGDSFGGGSS
                     GGGGAGGSW"
     gene            complement(8151..8630)
                     /gene="ispF"
                     /locus_tag="PXF40_000078"
     CDS             complement(8151..8630)
                     /gene="ispF"
                     /locus_tag="PXF40_000078"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HDL5801465.1"
                     /translation="MIRIGHGFDVHAFGEDRPLMIAGVEVPYHTGFIAHSDGDVALHA
                     LTDALLGAAALGDIGKLFPDTDMQYKNADSRGLLIEAYRQVQEQGYQVGNVDVTIIAQ
                     APKMRPHIDKMRQVIADDLQCDISQVNVKATTTEKLGFTGRGEGIACEAVALLLKRA"
     gene            complement(8632..9315)
                     /gene="ispD"
                     /locus_tag="PXF40_000079"
     CDS             complement(8632..9315)
                     /gene="ispD"
                     /locus_tag="PXF40_000079"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HDL5801466.1"
                     /translation="MKRKIIAVIPASGVGSRMQAEKPKQYLQLKGKTILEHTVSIFLE
                     HPHVEKVIVAVARKDPFYSTLELLKSPKIQLVFGGETRADSVLNALQEINTENAWALV
                     HDAARPCLKRSDLDKLLQINDPQGGILAIPAVDTMKRANGTKIAHTEDRSTLWHALTP
                     QFFPAQALKQALSSAFANKLQVTDEASAMELAGYQPQLVSGRSDNIKITRPEDLALAE
                     FYLTHNLEN"
     gene            complement(9333..9611)
                     /gene="ftsB"
                     /locus_tag="PXF40_000080"
     CDS             complement(9333..9611)
                     /gene="ftsB"
                     /locus_tag="PXF40_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HDL5801467.1"
                     /translation="MRLLITFFALLLGFFQYSFWFGKNGWSDYQEVQEEIALLKVENT
                     KLTSRNKLIEAEIYDLKNGVDALEERARLEREMVKENEMFYRIVPKNK"
     gene            9886..11493
                     /gene="pckA"
                     /locus_tag="PXF40_000081"
     CDS             9886..11493
                     /gene="pckA"
                     /locus_tag="PXF40_000081"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HDL5801468.1"
                     /translation="MLNRIEQELADLGITNVKEIVRNPSYEQLFEEEMKSDLKGYEKG
                     VLTNLGAVAVDTGIFTGRSPKDKYIVLDETTKDTVWWTSDAAKNDNKPMTQSTWQSLK
                     TLVTDELSNKRLFIIDAFCGASPEHRINVRIITQVAWQAHFVKNMFIRPTEEELKDFK
                     PDFVVMNGSQVTNPNWKEQGLNSENFVAFNITEGVQIIGGTWYGGEMKKGMFSMMNYF
                     LPLKGVASMHCSANVGEEGDVAVFFGLSGTGKTTLSTDPKRKLIGDDEHGWDENGVFN
                     YEGGCYAKTINLSIENEPDIYRAIRRDALLENVVVREDGTIDFDDKSKTENTRVSYPI
                     YHIDNIAVPSKAGHAKKVIFLTADAFGVLPPVSKLTPEQTKYYFLSGFTAKLAGTERG
                     ITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMEAAGAEAYLVNTGWNGTGKRISIKDT
                     RGIIDAILDGSIEKAEMSTLPIFNLAIPTALPGVETHILDPRNTYEDKAQWQAKAEDL
                     AGRFVKNFEKYATNEEGKALIAAGPKL"
     gene            11586..12587
                     /gene="bioB"
                     /locus_tag="PXF40_000082"
     CDS             11586..12587
                     /gene="bioB"
                     /locus_tag="PXF40_000082"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HDL5801469.1"
                     /translation="MTTFQLRLKAKDELTPHPTAQYWRKCQVEGLFDLPFMDLVFRAA
                     QVHRENFDANAIQLSTLLSIKTGGCPEDCEYCPQSARYDTGIEKQTMLDVETIVEKAK
                     IAKERGASRFCMGAAWRGPRPKDIKVVSEIINAVKSLGLETCGTFGMLEEGMAEELKQ
                     AGLDYYNHNLDTDPERYNKIIHTRNHEDRMDTLGKVRNAGLKVCCGGIVGMNETRPER
                     AGLIASLANLDPQPESVPINQLIKVEGTPLTNAEDLDWTEFVRTIAVARITMPQSFVR
                     LSAGRTTMPEAMQALCFMAGANSIFYGDKLLTTENPEEDHDRQLMDKLDLYPLQYIA"
     gene            12747..12844
                     /gene="ffs"
                     /locus_tag="PXF40_000083"
     ncRNA           12747..12844
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="PXF40_000083"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            12879..13586
                     /gene="gloB"
                     /locus_tag="PXF40_000084"
     CDS             12879..13586
                     /gene="gloB"
                     /locus_tag="PXF40_000084"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HDL5801470.1"
                     /translation="MLQITPIPALKDNYIWAIRNGQDVIIIDPSEHQPALNFIAKNAL
                     NLTAILITHNHHDHTDGVSGIVEQYPNIPVYGPQEVAEFANVIVSPEQHISLFGYDVR
                     IIESGGHTAGHISYLFGYDYLFCGDALFSGGCGRVFTGDYQAQFDALQRFKNLPNSVK
                     AYPAHEYTKSNLKFAEAVLPPSCVLSEYQEQVDLLRSQNKPTLPTTIGLEMQVNPFMQ
                     AVDLAEFIALRQQKDNF"
     gene            13745..14458
                     /gene="uppS"
                     /locus_tag="PXF40_000085"
     CDS             13745..14458
                     /gene="uppS"
                     /locus_tag="PXF40_000085"
                     /EC_number="2.5.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="di-trans,poly-cis-decaprenylcistransferase"
                     /protein_id="HDL5801471.1"
                     /translation="MNFDPQNMPKHVAIIMDGNGRWAKQKGKLRIFGHQNGVKAVRSA
                     VSFAAKHHIQVLTLYAFSSENWSRPETEVSALMSLFMKALDSEVKQLHKNNIRLKIIG
                     DKSAFSENLQKRIAESEKLTENNTGLILNIAANYGGYWDIVQAAQQLAVHVKSEQLAV
                     EQITPALFQQHLVTENQPQVDLLIRTSGEQRISNFLLWQIAYAELFFSPVLWPDFNDE
                     AFSDAIYAYQQRERRFGGC"
     gene            14482..15351
                     /locus_tag="PXF40_000086"
     CDS             14482..15351
                     /locus_tag="PXF40_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HDL5801472.1"
                     /translation="MLKERVLSAIIMIIAVLAAIFWLSPLPLTLVLSAIVVAAMWEWA
                     QFAGFKHPVPRAIVAMVTICLLLFAIVANTDYIRATRFITDETTPILFIGCIWWLIAL
                     VLVATYPNSAKLWEKSVAAKFLFGLATLVPFLIGTLALRFHNYAFDPYQGTYLFLYVC
                     LLVWGADSGAYFAGRAFGKRKLAPKVSPGKSWEGVIGGVLTSSLIAFTFLQLTPANVF
                     GKALATTPFILVSVGMVAISVLGDLAESMFKRQAGIKDSSQLIPGHGGILDRIDSLTA
                     AVPFFATFFFFVL"
     gene            15355..16665
                     /gene="rseP"
                     /locus_tag="PXF40_000087"
     CDS             15355..16665
                     /gene="rseP"
                     /locus_tag="PXF40_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HDL5801473.1"
                     /translation="MTSIIAFFILICVLVFVHEYGHFWAARKCGVKVIRFSIGFGKVL
                     FKKKDKQGTEFVFSLIPLGGYVQMWNDETDINAPAQQALNTKSVLQRAFIIIAGPAAN
                     FIFAILAYWVVFIAGIPTVKPVIGEILPNTIASQARIPTELEITKIGHQSIQDWESAS
                     LALVGFVGNKNVPLEGNINGNSTQKYELDLSNWSIDSAKENPLTALGIRPKSAKVTAE
                     IKQVVENSPASQVGIQAGDRILQINQQPFNWFNLVELVQAGKPIELKIEQRGQIKDLV
                     VQPEKKDERYIIGVIPSYEPLADKYRTELKYDILTAFYKSIEKVWSLTQTILQFIGNL
                     ISGDLSIKNLGGPISMAKGAGATAEIGLVYYLSFMALISVNLGVMNLFPLLPLDGGQL
                     VLLAVEAIRGKALSEKIQLKFQQIGFAFVLSLMLFAFANDIIHF"
     gene            16780..19161
                     /gene="bamA"
                     /locus_tag="PXF40_000088"
     CDS             16780..19161
                     /gene="bamA"
                     /locus_tag="PXF40_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HDL5801474.1"
                     /translation="MKKLLLSSLLIANGVVAAPFVVKDIRVEGVQPTTGESIISSIPV
                     RVGQTATDTDVSNVVRHLFSQQRFADVRATREGNTLVIKVAEKPIIGKVEIEGNQAIP
                     KDALEQNLKANLINQGEIFDAAKLEAFKEGLIEHYHSTGRYEAKIDTSVSNNTEGGVN
                     IKLAINEGEVAKAKTIKFEGNNAFSDKKLLENLDIQPDVSWWNIFESSKFEQTAYQKD
                     LETLRDFYLNRGYAKFAIQDTDVQFNDNKTEVALTYKLDEGSQYHVSEMRIIGNTANM
                     DSQLNALLKEFKPGQLFRKSDLTQIEEEIKSILGDAGYGSAKVDIYPQFNEENKTVKI
                     SFVVDAGRRIYVRKIRFEGNGVTADSTLRREMRQQEGAWLSTNKASLGKARLERTGFY
                     ESVDMSMPNVEGTADQVDVVYKIKERNTGSINFGIGYGTKNGISYQAGIKQDNFLGMG
                     STISLNGTRNNYGTSVNLGYTEPYFTKDGVSLGGNIFYEDYDNSDNDSMASYKRQTYG
                     INGTLGFPVNENNSYYLGLGYTHDKIKNAAREYTREKYVKSMNFEFDPAADYYKKIKA
                     DDFDFSLGWNYNSLNRGYFPTEGTTANIGGKITIPGSDNKYYRVSADFRNYYPLNREH
                     KWVISTKASIAYTNGFGGKEVPFYQLYTAGGIGTLRGFSYGAVGPQAIYYNTKSGKFD
                     SMNNDIIGGNALAAASLELITPTPFVSEKYQHNVRTSLFVDAASAWNTKWKKDEYTNL
                     PDYGDFKRFRASAGIAFQWMSPIGPLSFSYAKPIRKYDNDDIEQFQFNIGSSF"
     gene            19241..20032
                     /locus_tag="PXF40_000089"
     CDS             19241..20032
                     /locus_tag="PXF40_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HDL5801475.1"
                     /translation="MKKLFKMTGLAVALASTTGIANAADTIGFVDPSYVLQNHPVLLD
                     ASAKFDKFMKESQEKFAADEKKLADENKTLTAERNKINEDAQKLQNEQKNVEASIKKK
                     VAALEKDAPRLRSKEIQARQNAIQKEANAFQAKVTAIQKREADFAKKAEAFQKRADEF
                     QKRIEQANKENGGINPQEAQKQAVDEVNATIKEIAKSKGYTLVLQPQVALYAEDEGKD
                     ITEAVLDAIVKKHPEIKIEKPATEAQPATEKETKAEETKPEEAKK"
     gene            20032..21057
                     /gene="lpxD"
                     /locus_tag="PXF40_000090"
     CDS             20032..21057
                     /gene="lpxD"
                     /locus_tag="PXF40_000090"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HDL5801476.1"
                     /translation="MANFRLIDLAEHIGGTLRGNADLAIQSIAALDKADSSQITFISN
                     AKYRENLTACNAGAIIVSPADVEFCRADQNLIIVANPYVAYAQLAQYMDSTPKAASEI
                     HPSAVISPEAKLGNNVSVGANAVIESGVELGDDAVIGAGCFVGKNSKIGARTQLWANV
                     SVYHNVQIGADCLIQSSTVIGSDGFGYANDKGQWIKIPQTGGVIIGNRVEIGACTCID
                     RGALDPTVIEDNVIIDNLCQIAHNVHIGFGTAVAGGVIMAGSLKVGRFCQIGGASVIN
                     GHMEICDGAIITGMGMVMRPITEKGIYSSGIPLQTNKEWRKTAALVMNIDEMNKRLKS
                     LEKRFND"
     gene            21086..21544
                     /gene="fabZ"
                     /locus_tag="PXF40_000091"
     CDS             21086..21544
                     /gene="fabZ"
                     /locus_tag="PXF40_000091"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HDL5801477.1"
                     /translation="MTTENREPNIIEVTEIMDMLPHRYPFLLVDRVTDYEEGKWLKAI
                     KNVTFNEPCFTGHFPGAPIFPGVLILEAMAQATGVLAVATYGKLSEDELYYFAAIDNA
                     RFKRPVVPGDQLQLEVEFLKEVRGITKFTGKAYVDGKLVCEADLMCARRK"
     gene            21578..22372
                     /gene="lpxA"
                     /locus_tag="PXF40_000092"
     CDS             21578..22372
                     /gene="lpxA"
                     /locus_tag="PXF40_000092"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HDL5801478.1"
                     /translation="MRLIDSTAKISPLAIIEEGAEIGAHVEIGPFSVIGKDVKIGART
                     KIHSNVVINGMTEIGEDNHIFQFASIGEINQDLKYQGEPTKVVIGNRNRIRESVTIHR
                     GTVQGGGVTKIGDDNLFMINTHIAHDCSIGNRCIIANNGTLAGHVTLDDFVIVGGMSA
                     IHQFVVIGSHVMLGGGSMVSQDVPPYVMAQGNHARPFGINFEGLKRRGFDKPTMHAIR
                     KVYKLIYSSGKTLEECLVEIEQIAATEPAIAIFKQFFKRSTRGIIR"
     gene            complement(22410..24410)
                     /gene="mnmC"
                     /locus_tag="PXF40_000093"
     CDS             complement(22410..24410)
                     /gene="mnmC"
                     /locus_tag="PXF40_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HDL5801479.1"
                     /translation="MGKLTFATLTFNDADTPVSEQFDDIYFSTQDGLAESYYVFQEGN
                     QLWEKWQSHPKEAFVIAETGFGTGLNFLAVADKFQQFRAAFPQSKLKRLYFISFEKFP
                     LTASQLADIHQRYPQFATLSENLTACWQPRQIGCQRYHFEQVYLDLWFGEIAENLPQL
                     GDLYSGTIDAWFLDGFSPDKNPEMWNEQLYLQMFRLSANGGSFATFTASSMVRRGLEA
                     AGFAVKKRKGFGKKREMLWGEKPLDSQVSEPNYPYFYAKNETADDIAIIGGGVASFFV
                     ALSLLEKGKQVTLYCKDETLAINASGNLQGAIYPQLSDDDERNVQFYIHSFDYALQRL
                     QQLKSNIEFEHNLSGVVLYAYDEKTAKKLEKMVEQTADDTLLKSCSQAELSEKLGLSV
                     PNSGAFIPQAGWLSPVQLVRNGFTWLEQKGLKIVLNHKVEHLTFSNGMWQWQTRGETV
                     RHQAVVLANGHTLNEFSQANGIPLYPVRGQVSQIPTTSELQKLKCVLCYDGYLTPMSA
                     YGTHCIGASHIRDNAETEFSLSEHWENVAKLQQNVTVCEWTQGIDLSENKAKVGIRAA
                     FRDRVPMVGAVHHFEQQKSQYANLYNQLRRKQAVENAEIFTNLYMVNGLSSRGLTTAP
                     LLGELLASLIVNEPVPISEDIWHNLSPNRAWIRKLLKGSTVA"
     gene            complement(24635..26071)
                     /gene="trpCF"
                     /locus_tag="PXF40_000094"
     CDS             complement(24635..26071)
                     /gene="trpCF"
                     /locus_tag="PXF40_000094"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HDL5801480.1"
                     /translation="MQNIVQDNAQPNQPTILQKIVQDKAIWVAQKEQAFPLSEFQHKI
                     VKSDHDFYAALAKGTHQEPAYILECKKASPSKGLIRAEFDLDSIAQVYKNYAAAISVL
                     TDEQYFQGDFRYIDQVKRQTTQPILCKDFMISAYQVYLARFYNADAILLMLSVVNDET
                     YRELATLAHELGMGVLTETSTEAEFERALALGAKVIGVNNRDLHTLTIDMNRIVRLVE
                     KYQAQISADVCLISESGINDHQQVKNIKPYVHAFLIGSSLMGSADLNNAVRAVIFGEN
                     KVCGLTRVQDVKAVYEQGALYGGLIFAEGSPRQLSLRQAQELVVNAPLRYVGVFQNQA
                     VEFVEKMAKQLELFAVQLHGSEDEQYIAELAEKLGSKTQIWKALSVDVEVENLEFNDN
                     PQIARYVLDSKVGNQQGGTGKTFNWALIPETLKQKALLAGGIGTENIEQALAQGCVGL
                     DLNSGVESAKGVKDLQKLTACFGKIIQA"
     gene            26159..26470
                     /locus_tag="PXF40_000095"
     CDS             26159..26470
                     /locus_tag="PXF40_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HDL5801481.1"
                     /translation="MKSQVIQHLSYLEIALRVNQLWEATPPSPEALANEQPFCVETLT
                     PTQWLQWIFIPRMRAILDANADLPRNFAITPYLEEALKNEGYLQAICEPLLGLEKLLK
                     D"
     gene            26624..27352
                     /gene="truC"
                     /locus_tag="PXF40_000096"
     CDS             26624..27352
                     /gene="truC"
                     /locus_tag="PXF40_000096"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HDL5801482.1"
                     /translation="MTLDILYQDNSLIAINKPAGVLVHRSWLDKHETVFAMQTLRDQI
                     GQHVFPIHRLDRPTSGVLLFALNSETARIMSEQFEQHLVQKTYLAVVRGYLQGSAQID
                     YPLKVILDKIADKFSQEKEAQAAITDYKGLATVEMPYPVGKHQTSRYSLVELSPKTGR
                     KHQLRRHLKHLFHPIMGDSKYGDLHQNRALVEKSGVSRLMLHAHKLQFQHPKNLQKIE
                     IIASLDEQWQRLFAFFDWNFTQYY"
     gene            27370..27534
                     /locus_tag="PXF40_000097"
     CDS             27370..27534
                     /locus_tag="PXF40_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HDL5801483.1"
                     /translation="MDNSLLSLTHEQQQAAVEEIQKLMAQGISAGEAIQIIANQLRDK
                     YQILEKSNNE"
     gene            27527..28003
                     /locus_tag="PXF40_000098"
     CDS             27527..28003
                     /locus_tag="PXF40_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801484.1"
                     /translation="MNKLWTVLALTITSHYSFAAAEKIVTKDLPAEGKPAVVLQVFDE
                     SEKIAKPIKGNKLFISKKQTRLCWHSINLPVQNKVTIAEAFYAPAAMKLASPGSKINS
                     SADKKNHTIITEINLANNQVLNRCWGFDKTDPVGKYKMEIQINDHIFKGLEFEIVK"
     gene            complement(28040..28891)
                     /locus_tag="PXF40_000099"
     CDS             complement(28040..28891)
                     /locus_tag="PXF40_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HDL5801485.1"
                     /translation="MENQKQAEIELKIMLEQQNVALVENYLNQTSPFPVLAHQTELLG
                     NTYYDTPEQFFATQKMGLRVRSVNQQYEITLKTQGEIVGGLHIRPEYNLALPNSQPDF
                     QTLVEKYQLPFENSEQIAESLQAIFSTDFTRKTWLVQVGMSDIEVALDQGIIKNHFGE
                     EPICELEFEIKQGNLGDLFTLVEAMPKADGMWLSNLSKAQRGYLLGQAVKWEQKIATA
                     MDGENSEKLTQLLADFICVGNESLEVLVRFNQCTQQQFSNWQQARAFVKSKDYLLHNL
                     TNLKTMI"
     gene            28952..30361
                     /locus_tag="PXF40_000100"
     CDS             28952..30361
                     /locus_tag="PXF40_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HDL5801486.1"
                     /translation="MFSKIHHKLNNFVQRGLDNHLRLAVTGLSRSGKTAFITSLVDQL
                     LHINKGGNSHLNLFAPARHGQILSVKRVEQGDLTIPRFEYDKNRQSLENQPPQWPEST
                     TGISEIRLAIRYQRQHSLLRHIKETGTLYLDIFDYPGEWLLDLPLLSLSYKEWSQTQQ
                     TIHKDERAELATPWLQAVKKLDLFAKTDENLLAEFSQQYTDYLLACKAQGMQYIQPGR
                     FVLPTENAKGAPVFQFFPLLDLSEAEWEKLEQSDRNSIFHTLKKRYEHYQKKIVKPFY
                     EDYFSQFDRQVILADCLTPLNYGYNEFMEMKLGLQQLFKHFHYGNRSLFHRLFSSNID
                     KLLFIATKADHITSDQVPNLESLMRQLVQEGGRHAEFDGIETGYLAISSIQATDAVKV
                     TQQDKIIKAIRGIRSSDRKQVTLYPGSVPNRIPDKNYWQFNRFEFDQFEPKQLDYSQA
                     IPHFRMDSVLQFLLADMFE"
     gene            30407..30757
                     /locus_tag="PXF40_000101"
     CDS             30407..30757
                     /locus_tag="PXF40_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5801487.1"
                     /translation="MNTVISQRKPIHWVGSTLDDIREFPDNIKRELGFDLDLVQQGLL
                     PRDFKAMANLGSGVMEIRVKDPSGAFRLVYLAKFKDAIYCLHAFQKKTQKTAPKDIAV
                     IKARYAAVKELENE"
     gene            30750..31073
                     /locus_tag="PXF40_000102"
     CDS             30750..31073
                     /locus_tag="PXF40_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5801488.1"
                     /translation="MNNIDTKIRHTTEAQGNVFEDLGFPIDEAQKLKSASQQLIETKL
                     MLMNEMSNWIDKNNLKQSEAASILGVSRPRISDMVNGKLEKFTLDTLVTFVAKTGKTI
                     QLQLS"
     gene            31181..31660
                     /gene="smpB"
                     /locus_tag="PXF40_000103"
     CDS             31181..31660
                     /gene="smpB"
                     /locus_tag="PXF40_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HDL5801489.1"
                     /translation="MAKKPKVASNTIALNKRARHEYFIEDEIEAGLELQGWEVKALRA
                     GKGNISDSYVIFRHGEAFLFGAMITPLNMASTHIVSDPTRTRKLLLNKRELDSLFGKV
                     NREGYTIVATSMYWKNAWVKVKIGLAKGKKLHDKREDIKDREWQVAKQRIMKNANRG"
     gene            31863..33170
                     /gene="serS"
                     /locus_tag="PXF40_000104"
     CDS             31863..33170
                     /gene="serS"
                     /locus_tag="PXF40_000104"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HDL5801490.1"
                     /translation="MIDQNLLRTNLEDVATALKIKRNFILDVERVKTLEEQRKTLQVK
                     TETLQAERNTRSKNIGAAKARGEDISALLAEVDSMGNELDTAKVELDKVQAEIRELLL
                     SVPNLPADEVPLGKDDSENLEVLRWGEPRQFDFEVQDHVTLGENLNGLDFAAGVKLTA
                     SRFVVMKGKLARLHRALSQFMLDLHTEQHGYVETNVPFLVNHDTLYGTGQLPKFGEDL
                     FHTQPLTGQDPNEVQRPFGLIPTAEVPVTNLVRDEIIDEDSLPLRYTAHTPCFRAEAG
                     SYGRDTRGLIRMHQFEKVEMVQIVAPEKSMEALEELTGHAEKVLQLLGLPYRKVLLCT
                     GDMGFGAAKTYDLEVWLPAQNTYREISSCSNMWDFQARRMSARCKAKGDKKTRLVHTL
                     NGSGLAVGRTLVAVLENYQNADGSITVPEVLRPYMGGLEVITA"
     gene            complement(33229..33555)
                     /locus_tag="PXF40_000105"
     CDS             complement(33229..33555)
                     /locus_tag="PXF40_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801491.1"
                     /translation="MVSVDFKNNLLEFIFYGLFSEHTQTNIINGLQFYPKAGVAFRKD
                     LRFRKRAVYQREIMVFYQLDKIDEPKKVTIIAFRLGRMKNPIRLDTVQNRRVVTEIFM
                     NYPEKD"
     gene            complement(33548..33760)
                     /locus_tag="PXF40_000106"
     CDS             complement(33548..33760)
                     /locus_tag="PXF40_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801492.1"
                     /translation="MSIVIVDTDFVVHKEDEEWTTEEIKMIEEHLLEEQSAQYQVKRE
                     VPKQFYADIAERLSRGDLTAWEQLDG"
     gene            33947..36532
                     /gene="leuS"
                     /locus_tag="PXF40_000107"
     CDS             33947..36532
                     /gene="leuS"
                     /locus_tag="PXF40_000107"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HDL5801493.1"
                     /translation="MQQQYNPSEIEPKVQRYWAENKVFKAVKDVTKEKYYCLSMLPYP
                     SGKLHMGHVRNYTIGDVVSRYQRMIGKNVLQPMGWDAFGLPAEGAAVKNNTAPAKWTY
                     ENIEYMKGQLKMLGFSYDWDREVTTCRPEYYKWEQWFFTELYKKGLVYKKTSTVNWCP
                     NDETVLANEQVHEGCCWRCDTPVEQREIPQWFIKITDYAEELLNQLDNLPQWPDQVKT
                     MQRNWIGRSEGVEITFKIAGSNVELPVYTTRPDTFFGVSYVAIAAAHPLAELAAQNNP
                     ALAEFIREAKNTKVAEAELATMEKKGMATGLFAIHPLTGKEVPVWVANFVLMHYGTGA
                     VMAVPAHDERDFEFAQKYDLQINQVIQPLDGSEWDFSKAAYTEHGKLINSAEFDGLEF
                     DVAFTAIADKLEAMGVGKRQVNFRLRDWGVSRQRYWGAPIPMMTTEEGEVVTVPLQDL
                     PVILPEDVVMNGVQSPIKADPEWAKTTYNGKPALRETDTFDTFMESSWYYARYTCPQY
                     HEGMLDSDEANYWLPVDQYIGGIEHATMHLLYFRFFHKLLRDAGILNSDEPATKLLCQ
                     GMVLADAFYYTSPTNERIWVSPTQVTLERDEKGRIIKATDPQGRELVHSGMTKMSKSK
                     NNGIDPQEMVEKYGADTVRLFMMFASPAEMTLEWQESGVEGAKRFLGRVWNLVYSYAQ
                     NPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQTFNTAIAAVMELMNKLTKAP
                     LETEQDKAVMAEALSAVVRMLYPITPHICFELWQVLGNEQTIDFAPWVQADESAMVED
                     EKLVVVQVNGKVRGKITVSATATEDEVKAIAKADPNVAKFLDGQQIVKEIYVPFKMLS
                     FAVKA"
     gene            36732..37220
                     /locus_tag="PXF40_000108"
     CDS             36732..37220
                     /locus_tag="PXF40_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801494.1"
                     /translation="MIKKLSLIAVFALTACGWHFKNNEVLPESFRTLTFESADQHSEM
                     SRILRNQLQLSDVKLVPSTANVAKLRLVSTSTDSKVVSVFKQAREAEKILTLNVDAIA
                     DIPNKGQYPLEVSVHRTFFDDSRAALAKSAEKEMIMKDMYEQASRQLIIKMAGLKKEL
                     SK"
     gene            37263..38288
                     /gene="holA"
                     /locus_tag="PXF40_000109"
     CDS             37263..38288
                     /gene="holA"
                     /locus_tag="PXF40_000109"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HDL5801495.1"
                     /translation="MQKIFPETLQFSLNKGLQPFYLLTGNDLLLVNETKDAIIHTARL
                     NGFDEKKEVEIKNDTNWEELFEAAQSMGLFFARQIMVLNFPDSPTATQFKKLAELCAF
                     IHSDLLFILHLPKFSKTMEKQAWFTQIELNLVQINCQTPELSKLPQWVSHRAKAMNLQ
                     IENEANQLLCYSYEGNLLALKQALQLLQLNATDGKITLTKAQEVVEHSAQFTPFQWID
                     ALFEGKIQRAQRILYHLQNEEVQAVVLLRIVQKELMILLEITRNPTAVVSSEQSLFIG
                     NLRTEFDRLKIWQNRRPFYNQITQRLTYQKLYALIQQLAELERKVKQEFSDDIWQELE
                     RFSAQFT"
     gene            complement(38289..38474)
                     /gene="yacG"
                     /locus_tag="PXF40_000110"
     CDS             complement(38289..38474)
                     /gene="yacG"
                     /locus_tag="PXF40_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HDL5801496.1"
                     /translation="MPETIVNCPTCEKEVVWSKESKYRPFCSERCQIIDLGDWAAEKH
                     SIASEEAELFSEDLEKY"
     gene            complement(38456..39091)
                     /gene="coaE"
                     /locus_tag="PXF40_000111"
     CDS             complement(38456..39091)
                     /gene="coaE"
                     /locus_tag="PXF40_000111"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HDL5801497.1"
                     /translation="MTYVVGLTGGIGSGKTTVSDLFSALGVEVIDADVVARQVVEPGT
                     PLLAKIVEHFGEEILTAEKALERTKLRQIVFNNEEEKTWLNNLLHPAIREEMVKKLQE
                     STACYVIWVVPLLIENKLTEYCDRILVVDVSPEIQLERATKRDNSKIETIKNIMAAQV
                     SREERLSYADDVIENNLPFEQGLLLIKEQVQALHYKYLALAKKEKECQKLL"
     gene            complement(39127..39783)
                     /locus_tag="PXF40_000112"
     CDS             complement(39127..39783)
                     /locus_tag="PXF40_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HDL5801498.1"
                     /translation="MLILFSLFIAVWLKAEIPRFAIRVNRQIYQETTSLVNIGLTEQQ
                     FLAQSVLQPKQPRSANLFFLLFPLIMLCSESPIIGTIFILLCFLSLLDMCYYLTDIRY
                     LVLIFLLVLWESLADFQHQTFTFTLAFCLLIGLVSQLMFKKEAFGSGDMLLLVALSPL
                     FRLEKMLLLILTASLLGIGYYLAYWLMKKQKLAKLAFIPFISTAMLLVLMLESRGINY
                     "
     gene            complement(39786..40982)
                     /locus_tag="PXF40_000113"
     CDS             complement(39786..40982)
                     /locus_tag="PXF40_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HDL5801499.1"
                     /translation="MTKIYEFHWQAQSRFGQKQRGKRLATNRDMLENLLLAQGYQHIR
                     ISRNFVLSANPKKEEVNSLLSQLALLVNSAMPLKQALSMLLQNCRNIRLYLWLNELIQ
                     HIESGYAFSQSLEKLGEFVTNQEIQLIKMGEQSGKLGIMLTNLAESRAKLEKLAKKVK
                     KILFYPVIVLLISLALSIGLLVLIVPQFAQLYGSKDKTLPLITDILFTLSECLIEQGT
                     VLLGTLLLAVIFYLFFAKKSRLVAKWKMALWAKMPLFSRIIEQSRIIFFSQNIALMLN
                     AHIPLDVALRSFLSEKNDDPILQQEIGTMLNLLQQGYKFSQGINPNVFGAEMAQMLEV
                     GEKSGNVAKMCEHISEMYQQKLDYQIDILSQLLEPMLMLIMGVIVGTIIVGLYLPIFD
                     MGALVE"
     gene            complement(40979..41431)
                     /locus_tag="PXF40_000114"
     CDS             complement(40979..41431)
                     /locus_tag="PXF40_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilB"
                     /protein_id="HDL5801500.1"
                     /translation="MEYSVTDLNSQRFIEISAEQWQKNCNEKQILLRYLAIPLQETEE
                     QLWLGIDDMQNLNACEIFAFIYHKQIEPVLISSDELKFLLNALSPEQSSRQSEIYEEN
                     TAYSLAHSEQVDRNDPIIQILENLFKFCLQHNASDIHFEPQKEKLLRQ"
     gene            complement(41452..41931)
                     /gene="ppdD"
                     /locus_tag="PXF40_000115"
     CDS             complement(41452..41931)
                     /gene="ppdD"
                     /locus_tag="PXF40_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HDL5801501.1"
                     /translation="MQKIVHFRPLGIRQLHRAFTLIELMIVIAIIAILATIAIPSYNS
                     YTQKAALSELLQASASYKSDVEVCIYNSGGLDNCSGGTNGIQANKTSSNTTKYLNSIA
                     VTKGVITVTGKGSLNGYGYTLTPSFSNNTISWTASCSGNDTSLFPANFCSTTVTPNG"
     gene            42112..43491
                     /gene="radA"
                     /locus_tag="PXF40_000116"
     CDS             42112..43491
                     /gene="radA"
                     /locus_tag="PXF40_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HDL5801502.1"
                     /translation="MAKAPKTAYVCNDCGAEYSRWMGQCKECKAWNTISEVRLISSKE
                     AAKSDRFSGYAGETSGKVQTLSDISLQEVPRFSSGFNELDRVLGGGVVPGSAILIGGH
                     PGAGKSTLLLQVMCGLAQHLPTLYVTGEESLQQVAMRANHLGLPTANLKMLSETSVEH
                     ICNIADQEKPKIMVIDSIQVMHLSDIQSSPGSVSQVRECASFLTRYAKTRQVAIIMVG
                     HVTKDGTLAGPKVLEHAIDASLLLEGESDSRFRTLRSQKNRFGAVNELGVFAMTEQGL
                     KEVKNPSAIFLSRSEEQTPGSSVMVLWEGTRPLLVEIQALVDHSMLANPRRVAVGLDH
                     NRLSLLLAVLHRHGGLQMSDQDVFVNVVGGVKVTETSADLALILALISSFRNRPLPQD
                     LVIFGEVGLAGEIRPVTSGQERISEAAKHGFKRAIIPHGNVPKKAIKDMQVFTVKKLS
                     DALDILYNL"
     gene            complement(43546..43776)
                     /locus_tag="PXF40_000117"
     CDS             complement(43546..43776)
                     /locus_tag="PXF40_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HDL5801503.1"
                     /translation="MDYVEILGYVAMILVACSFLLKDVIKLRVVNSLGCACFVVYGLL
                     IGSIPVTGLNALVVCINLYYISKGNRPTAAHS"
     gene            complement(43896..44390)
                     /locus_tag="PXF40_000118"
     CDS             complement(43896..44390)
                     /locus_tag="PXF40_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HDL5801504.1"
                     /translation="MKISIIVARTINKVIGKDNQMPWHLPVDLARFRQNTLGKPVIMG
                     RKTYESIGRLLPKRPNIILSRSGFTVEGAYAVQSLEQAVELAKNFANTAEIMIIGGGE
                     LFKQALPLAERLYLTEIQADIEGDTFFEFDEQNWALVEEKWSEIDENNPFRCRFMCLE
                     RKSV"
     gene            44466..44621
                     /locus_tag="PXF40_000119"
     CDS             44466..44621
                     /locus_tag="PXF40_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl kinase"
                     /protein_id="HDL5801505.1"
                     /translation="MATLFLVTSEQIMSKTIVIKFGTSTLTHGTKSLSRPYMLELVKL
                     NYTNSIV"
     gene            44618..45586
                     /gene="proB"
                     /locus_tag="PXF40_000120"
     CDS             44618..45586
                     /gene="proB"
                     /locus_tag="PXF40_000120"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5801506.1"
                     /translation="MIVVTSGAAAAGRDYLGHPELPKTLASKQMLAAVGQSQLIRVWE
                     NLFDIYNIHIGQMLLTRADLDDRERFLNARDTLDALLAQKIIPVINENDAVATEEFKV
                     GDNDNLSALVAILAQADQLYLLTDQEGLFSADPRSNPDAKLLSVVEKITPEIRQIAGG
                     SSTGLGTGGMSTKITAADIATRSGVETIIASGSRPNVLVDLANGQNIGSKFLVQSDRL
                     EGRKRWLFAAPQVGEIVVDFGAEQALLQHKSLLPVGVSAIKGEFTRGEVIKIFSQDGK
                     ALALGIARYSSEALLRIKGKKSKEIESLLGYEFGSVAVHSDEMVVY"
     gene            45586..46350
                     /locus_tag="PXF40_000121"
     CDS             45586..46350
                     /locus_tag="PXF40_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HDL5801507.1"
                     /translation="MELGIDVLAILFAVATLAGFIDAIAGGGGLLTIPALMAAGLPPA
                     MALGTNKLQACGGSLSSSLYFIRKKAVNLKQIWLLILCTFLGSAAGTIFVQMINVDFL
                     KTLLPFLILIIGIYFLVSPKIGDEDRKQRISFTLFAFTAAVALGFYDGMFGPATGSFM
                     TLAFILLLGFNLSKAVAHAKVINFTSNFASLIFFTLGGAVMWKIGLIMMVGQFIGGTL
                     GAKMVMTKGKKLIRPMLVTMSFMMVGKMLYEQGIFN"
     gene            46353..46985
                     /gene="nth"
                     /locus_tag="PXF40_000122"
     CDS             46353..46985
                     /gene="nth"
                     /locus_tag="PXF40_000122"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HDL5801508.1"
                     /translation="MNKAKRIEILTRLRNENPKPTTELNYSNPFELLIAVILSAQATD
                     KGVNKATDKLFPVANTPQAILDLGVDGLKEYIKTIGLFNSKAENIIKTCRDLIEKHNG
                     EVPEDRDALEALAGVGRKTANVVMNTAFGHPTIAVDTHIFRVSNRTNFAPGKNVVQVE
                     EKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEFKEKTE"
     gene            47182..48432
                     /locus_tag="PXF40_000123"
     CDS             47182..48432
                     /locus_tag="PXF40_000123"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HDL5801509.1"
                     /translation="MDIYLVGGAVRDQLLGLPVKDRDFLVVGATAEQLLAQGFQQVGA
                     DFPVFLHPETKEEYALARQERKNGNGYNGFICDFSPNVTLEQDLIRRDLTINAIAQDE
                     NSTLFDPYGGVQDLENRLLRHVSPAFSEDPLRVLRVARFAARFHSFGFTIAPETLKLM
                     REMVQSGELKHLTAERVWLETQKAFETDNPHVYFDILRLIGALKVLFPELDRLFGVPQ
                     PPQHHPEIDSGKHTLMVLQQAKRLAKKAENPTALLFAALCHDLGKGLTPADILPHHYG
                     HEVKGIQPTRELANRLKIPTEIKDFALLVTEYHTHCHKMAELRPETVIKLFNSLDVWR
                     KPNRFFDFLFACEADARGRLGFEQRNYPQPELAKKYYQAAIEIDVQQVIQDGFEKQAI
                     REELNKRRVYAVRSIKLDSDLINH"
     gene            complement(48533..49468)
                     /locus_tag="PXF40_000124"
     CDS             complement(48533..49468)
                     /locus_tag="PXF40_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDT family transporter"
                     /protein_id="HDL5801510.1"
                     /translation="MSESKPFPITTGFFAMPLGLGALGLAWLNATPITPYATTIGNII
                     AGTSVILWVALLGCYVYRVFFCFEQIKAEFMHPVQCCLFSLVTMTTMISGDVLYVWDF
                     YLGELLIFLGVIVHLIFLVFIIGGLWKGTQFLPETLHPVHYLPPIAGSFTMASSLSLI
                     GYSEIASLFLGIGIISWLVYEPTMLQRIRLSPLFPIARPSLGIVLAPAFVGASAYFSM
                     GGELDLLAKMLWGYGFLQFCFILRNLKWIAENGFSMGFWAFSFGLAAMARGAIEFYQF
                     EPLSFIGLAGFTIANFGIGLLLIFTLKLWLQQSRA"
     gene            complement(49597..49791)
                     /gene="iscX"
                     /locus_tag="PXF40_000125"
     CDS             complement(49597..49791)
                     /gene="iscX"
                     /locus_tag="PXF40_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HDL5801511.1"
                     /translation="MKWTDTRMIAENLYDMNPDLDPTTVRFTDMHKWICEMEDFDDDP
                     EASNEHILEAILTIWLEEYE"
     gene            complement(49791..50132)
                     /gene="fdx"
                     /locus_tag="PXF40_000126"
     CDS             complement(49791..50132)
                     /gene="fdx"
                     /locus_tag="PXF40_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HDL5801512.1"
                     /translation="MPKIVFLPHEEFCPEGMVVEAKAGDNLLEVAHEAGVEIHHACDC
                     SCACTTCHVVIREGFDSLNDTSDQEEDMLDKAWGLEIDSRLSCQCIVGEEDLVVEIPK
                     YNLNHANEAAH"
     gene            complement(50151..50516)
                     /locus_tag="PXF40_000127"
     CDS             complement(50151..50516)
                     /locus_tag="PXF40_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 51 family protein"
                     /protein_id="HDL5801513.1"
                     /translation="MSNYVKTEISEQFRTVAVEFDLEDNRIFELGERINTEYDVAYMN
                     GYNWAAFLRAYLSIYRPSLLELLEEDPDVGCYYVTYPLSEKSKEKARELKKIIVYLVE
                     NEEEILNFIGEHLDNIEWD"
     gene            complement(50526..52379)
                     /gene="hscA"
                     /locus_tag="PXF40_000128"
     CDS             complement(50526..52379)
                     /gene="hscA"
                     /locus_tag="PXF40_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HDL5801514.1"
                     /translation="MALLQISEPGQTAAPHQHKLAVGIDLGTTNSLVATVRSGQTQVL
                     LDEQERALVPSVVHYAETEKTVGIEAFAKAALDPKNTVISAKRLIGRSLADVQQRYQN
                     LPYQFVASENGLPLIQTAQGNKSPIEVSADILSHLAQFAEKRLAGELSGVVITVPAYF
                     DDAQRQSTKDAARLAGLNVLRLLNEPTAAAIAYGLESGQEGVIAVYDLGGGTFDLSIL
                     RLRKGVFEVLATAGDTALGGDDFDHLLAEWIAEQANYKPQTASEQRELLTLATQTKVA
                     LSQAVEFEVKFANWTGVVSRSQFNELIQPLVKRSLMTCRRALKDAGVEAEEVREVVMV
                     GGSTRVPFVREQVGEFFGKTPLTSIDPDKVVAIGAAVQADILVGNKPDSDMLLLDVVP
                     LSLGIETMGGLVEKIIPRNTTIPVARAQEFTTGKDGQTAMTIHVLQGERELVEDCRSL
                     GKITLRGIPAMAAGVAQVRVTYQVDADGLLNVTAMEKSTKVQASIQIKPSYGLTDEEV
                     TQMIKSSMANAKEDMEARQLVEQRVEADRVIDSVVTALKEDGSAVLSVEEFQAIEAQL
                     ARLIELKEGTDRFAIQQGIKEVDLATQEFAARRMNLSIQKALAGKKMDDLA"
     gene            complement(52695..53036)
                     /locus_tag="PXF40_000129"
     CDS             complement(52695..53036)
                     /locus_tag="PXF40_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease domain-containing protein"
                     /protein_id="HDL5801515.1"
                     /translation="MKAILCQRAKQLRTNMTEAEKVLWQALRAKRFLAIKFKRQQVIG
                     NYIVDFVCFSAKLVIELDGSQHLDQQNYDNLRTHFLNGQGFRVLRFWNNQIHSDLEAV
                     LDTIFYEITRG"
     gene            complement(53184..53816)
                     /locus_tag="PXF40_000130"
     CDS             complement(53184..53816)
                     /locus_tag="PXF40_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 family protein"
                     /protein_id="HDL5801516.1"
                     /translation="MKNLEQLLDKQSAWLILRDWFTQAKNHYEILASYPEDAGSALVG
                     MQLSTRSPLGAMVYETGGVFIDHGWLRILGSGNEKLPRGLFDWNFGKTFKQSGEQPSH
                     LLVADDAIGGYFAINAGGIGSDLGKVYYYHPKAKKWENTQLGYSEFLGWALAGDLNHF
                     YQDLRWENWQTDVEKLQGHQVLDLTSKIAVPIERHYQGEFAPENMGYSVA"
     gene            complement(53870..54391)
                     /gene="hscB"
                     /locus_tag="PXF40_000131"
     CDS             complement(53870..54391)
                     /gene="hscB"
                     /locus_tag="PXF40_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HDL5801517.1"
                     /translation="MNNPFTLFDLPVQFQLDNAQLSERYLALQKQLHPDNFAHKSSAE
                     QLEAVQKSADVNEALNILKDPILRAEAMIEIHTGEAKNLEEKSMRDVDFLMQQLEWHE
                     KLETIEHRKDETELTVFLKQIKAEQKAVLEQLEQTLNTADWQKANALTDKLRYFKKLI
                     IQIEKVEEKFFDY"
     gene            complement(54401..54724)
                     /gene="iscA"
                     /locus_tag="PXF40_000132"
     CDS             complement(54401..54724)
                     /gene="iscA"
                     /locus_tag="PXF40_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HDL5801518.1"
                     /translation="MSITLTEAAANRVRTFLENRGKGIGLRLGVKTSGCSGLAYVLEF
                     VDVLNEDDQVFEQHGVKVIVDEKSLTYLNGTQLDFVKEGLNEGFKYTNPNVKNECGCG
                     ESFSV"
     gene            complement(54833..55216)
                     /gene="iscU"
                     /locus_tag="PXF40_000133"
     CDS             complement(54833..55216)
                     /gene="iscU"
                     /locus_tag="PXF40_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HDL5801519.1"
                     /translation="MAYSEKVIDHYENPRNVGTFDKEASDTGTGMVGAPACGDILRLQ
                     IKVNDQGIIEDARFKAYGCGSAIASSSLITEWVKGKSLEEAGAIKNSDIAEELELPPV
                     KVHCSILAEDAIKAAIADYKEKQAK"
     gene            complement(55343..56563)
                     /locus_tag="PXF40_000134"
     CDS             complement(55343..56563)
                     /locus_tag="PXF40_000134"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017459011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HDL5801520.1"
                     /translation="MKLPIYLDYAATTPMDERVAKKMMEYMTKDGIFGNPASRSHKFG
                     WEAEEAVDVARNQIADLIGADSREIVFTSGATESDNLAIKGAAHFYQTKGKHIITVKT
                     EHKAVLDTCRQLEREGFEVTYLDPEEDGILDLAKLKAAIRPDTILVSVMHVNNEMGVI
                     QPIKEIGAICRAKKIIFHVDATQSVGKIEVNVQDLNVDLMSFSSHKLYGPKGIGGLYV
                     CRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMARLTVLRDR
                     LYNGFKDIEEVYVNGSMEEGKRIGSNLNISFNFVEGESLMMSLRDIAVSSGSACTSAS
                     LEPSYVLRAIGRDDELAHSSIRFTLGRWTTEEEIDHTIEIVKKAIVKLRELSPLWEMF
                     KEGVDLSKIEWNHH"
     gene            complement(56618..57070)
                     /gene="iscR"
                     /locus_tag="PXF40_000135"
     CDS             complement(56618..57070)
                     /gene="iscR"
                     /locus_tag="PXF40_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HDL5801521.1"
                     /translation="MKLTSKGRYAVTAILDIALHGKLEPVSLADISDRQAISLSYLEQ
                     LFAQLRRDGIVQSVRGPGGGYQLGKKPEEISVGMIISAVNENIDVTKCKGSGNCRKDS
                     QCLTHSLWERLEDQIEQFLGTISVADLAAEHADHDCEKEHCHDHPHHH"
     gene            57418..58899
                     /locus_tag="PXF40_000136"
     CDS             57418..58899
                     /locus_tag="PXF40_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein transport protein"
                     /protein_id="HDL5801522.1"
                     /translation="MKMKNFSKTLIASLVAFSSAGASAAAFQLAEISTSGLGRAYAGN
                     AAVADNASVVATNPALMTLFKQTEISAGGIFVDADVNIDGKLNATGADASHKNVIPTA
                     IVPNAYIVSPINERLSIGGGVNVNYGLISEFDPNYSAGFLGGRTSLSAVNVNFSAAYD
                     LGYGFVLGAGLNAVHAKAELGRFLGAGAARFAPAKQFLEDKKVQVQSAIQGLKALEAG
                     IAAGNTALEAQKTQVLAQVNGLLKSQNLNQTITNSAQLERLVNGIQNTNASSTIHKLK
                     GDKWALGWNVGLVYNINERNRLGFTYHSEIDLKFKGKYSNTVPVVIPKMVDTITGGAE
                     IDGTLRLRLPAFWEVSGYHKLTDKLAAQYSYKRTDWSKFQSLEAYDMQGNRLLHKTEN
                     FNDSQRIALGLSYDVNEMLTLRTGVAFDESASVTHPSISIPDTDRAWYSVGATVRFTP
                     NLSADVGYSHLRGSNLTFSEDGLATFKSKARANLYGLNVNYKF"
     gene            58966..59520
                     /locus_tag="PXF40_000137"
     CDS             58966..59520
                     /locus_tag="PXF40_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HDL5801523.1"
                     /translation="MKSQIYYDYYPSPIGQLLLLATEEGLIYIELGQEQQTTSLDNFL
                     SAQAASGQILEIFCKTKEILDRYFAGEPLDFQQLDFLAPQGTPFQQSVWKILREIPYG
                     QTTTYGEIATQLGKPSAMRAVGGAVGRNPISILVPCHRVLGKNQALTGFGGGLPNKRF
                     LLQLEDITYKDKGIEFVKPKTKKW"
     gene            complement(59616..61466)
                     /locus_tag="PXF40_000138"
     CDS             complement(59616..61466)
                     /locus_tag="PXF40_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5801524.1"
                     /translation="MQVKKFSQKYINWVLKLGRLKASLLGFFMVALSAILIQSSLTYL
                     FIGRVVVVDILRSIAFGLISAPFVLYFFTLLVEKLEISRLKLEKAVRDLEELREQDAY
                     LNAKLEKNSRDKSILMATISHELRTPLNGIIGLSQILLDDKTTEKQQEYLKTINMSAT
                     ALAHIFGDIIDLEKIDSSRIELVRKEVEFEQLIHDIANFGHFMAGNKQINFEVKYPPD
                     LPKYIYIDHARLSQILWNLISNAVKFTPASGRILLEIYQLDKEQFSFAVTDSGIGIPE
                     KDQRKIFDMFYQAENSKEKKAQGSGIGLSVSKRIAKLMGGDLVVASQENQGSTFTLTV
                     QAESTETKPIFAIQQHSLKVLLVEDIEMNVVVARAMLEKIGCVVDVAMSGEETFQHFA
                     QNSYDLILLDIQLPDTTGFEIAQQLRLQYENEEIDYLPLLVALTANVIQSRQEYQAQG
                     MDDVLHKPLSLDELMRCLNQHFGDDFLQKNEEKQPLVERGSENLPYSITILNELIGVM
                     GKENVLANMDLFADLMPTYLANLQRYLSDWQTTNSVESRKLTADEAHKIKGALASVGL
                     HQLQQTAQLAQSDNGEQWEQNIAHWVEMICSKWQMDLQLAKEYVRSKGDI"
     gene            complement(61521..62525)
                     /locus_tag="PXF40_000139"
     CDS             complement(61521..62525)
                     /locus_tag="PXF40_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5801525.1"
                     /translation="MPGDANKIISNGTSAGGALSTLLGASADHYDYEPYLKEAGALNA
                     SDKIFAVSAYCPITNLENADMAYEWQFNGVNEYSRIDMSRLNAAEFNDRSKPKPKPKI
                     EGSLNEAEIKVSNELAERFPTYLNSLHLVDEKGNPLTLDPKGNGSFKDYLSEVVKTAA
                     NKAYRGLVQDSEEQKAFQQISWLSFEKGKVSSVDWFGYVFSDKRMKSPPAFDALNGSS
                     GENNLFGTDTENNRHFTLYSAERSANKDLNLADPQIVKRMNPMHYLDNPNAAEHWRIR
                     VGTADRDTSLAISAILAIKLQMAGKNVNYETPWNVPHSGDYDVNELFLWADELVKGKK
                     "
BASE COUNT        19302 a        13366 c        12419 g        18378 t
ORIGIN      
        1 actaaccata acattacagt ttaaaaatca actttaaatc caaggagcta aaatgcttaa
       61 tttatcggca aaaaacatcc gtttaaatgg ttcagcaagc aacaaagaag aagttatccg
      121 ttttgttgcc gccgaattag tcgccaaggg caatgtagca gccggctatg aagtcggtat
      181 gcttaatcgt gaaacccaaa cctctacttt tttaggtaac ggaattgcta ttccccacgg
      241 cacgcttgat acccgtgatt tagtcaaaga aaccggcgtg caaattatcc aacttccgca
      301 aggcgtggaa tggggcgaag gcaacactgc ttatgtagtt atcgggattg cggctaaatc
      361 ggacgaacac ttaaccttac tccgtcaact caccactgta ttaagtgatg aagaggctgc
      421 tgccacatta gcgaaaacgc aaaatttaga tgaatttatt gccgtattaa gcggtaagaa
      481 aaaccttcct gccttatctc aagagctgat ttctctgaat atcgaatctt caagccctat
      541 cactttatca gccattaacg ccgcaaaact acaagagcaa ggctatgttt cccaagcatt
      601 catcagcgat gtggttgcca acaaagcgtt acatttaggc aataatctat ttgtggtgga
      661 ttccgccaaa ggcaaccaag ctaacggtat cgctattgcc cgtaatacgc aaggtcaaac
      721 cctactaact gtggcagaaa ccgacaatgc tctacagcca ctattaactc aattattaaa
      781 accagaagta agaagccagt ttgctcattt ctctgcggag caaatgcttg gtttattaaa
      841 aggcgaaagc gtagcttcaa cccctgtaac caatgtcgaa gcgagtggca accaagtggt
      901 tggcacattc accattcgta acgacaacgg cttacacgcc cgcccggctg cggtgttagt
      961 acaaacggtg aaaccgttct cctcaaaaat cagcgttgaa aatttagacc gcaacactgc
     1021 accggcaagt gcgaaaagtg caatgaaagt agtagcacta ggggcaagcc aagggcatcg
     1081 tttacgcttt gtggcagagg gagaagacgc ccaacaagcg attgaggcat tacaacaagc
     1141 aattattaac ggcttaggcg aaagtgtttc attcgtaccg gcggtggcag atacgattga
     1201 aagcattgct gtttcagcaa ttcctgcgga agaaactgcg actgctgtcg atgccaatac
     1261 gaaagaagca acttttgtaa ttaaaaacga acacggttta cacgctcgcc caagtgcggt
     1321 gttggtgaat gaagtgaaaa aattcaacgc caaaattgaa gtgcaaaatg ttgataaaaa
     1381 ttcaccgctt gtaagtgcca aaagcttaat gaaaattgtt gcccttggcg taaccaaagg
     1441 cacgacgcta cgctttgtgg caagcggtga tgatgccgaa gtagcacttg cggcaatcgg
     1501 tgctgcgatt gaagcaggtt taggcgaata agcgaggaat cattatgcgt attgcaaccg
     1561 ttaccctcaa ccctgccttt gatttagtcg gcaaacttca acgtattgaa atcggcgaag
     1621 tgaacaccgt agaaaccctt ggtttatacc ctgccggcaa aggtattaac gttgctaaag
     1681 ttttagctga cttaggcaca aaactttcgg ttaccggctt tttaggcgaa gaaaatcaag
     1741 gcgatttcgt aaatgccttt aaacacaatg atttggctga tgaattttac cgtattaacg
     1801 gtaaaacccg cattaatgtc aaaatcactg aaaccgaggc tgatgtaact gatctgaact
     1861 ttctcggctt tgaaatttcg gaaagcgatt gggaaaaatt cgtcacatta tctcatcagt
     1921 gggaaagcaa atttgactta gttgcagtgt gtggatctct ccctcgtggc gtaacgccgg
     1981 aaaaatttgc ttcttggttg gaatctttac accgccaagg cttaaaagtg gtgttagata
     2041 ccagcaatgc ggctctcacc gccggcttaa ccgctcaccc ttggttagta aaaccaaacc
     2101 gccgagagct ggaagtgctg gtcgggcatt cactcaactc aatcgaagag attattagtg
     2161 cagctaaaca attacgttcc cgtggtattg aaaatgtaat tatatcaatg ggcgaacaag
     2221 gctctctttg gctaaatcac gaaggcgtgt tacaagcccg cccaccacgt tgcgaaaatg
     2281 tagttagcac tgtaggtgct ggtgattcaa tggttgccag cttgatctac ggcttatctc
     2341 aaggttggag caaagagcag accttgcgtt ttgcctcagc tacttctgct ctagctgttg
     2401 ttcaaagtaa cgttgggatt gcagaccgtg cggcgttaga cgatattatt aaacaaaccg
     2461 acattaccgt gatttcagaa aatcattaaa cctcaatcaa aggaacaaac caatatgaat
     2521 atttcttttg tatttcctca aacactaggc aacgcacgcc gtttcttagt gaatgaaatg
     2581 ttatctgccg ctgccaagca acaaggacac aatgttgtgg cggcaaacca agctgatttt
     2641 gtggtgttat tcgataacgc aattccacaa gaagctgccg gcaagcaagg ggcaattttg
     2701 gacttagaac aagcctttgc tcaacctgaa gccagtctca aacaagcggt cgaaaatgca
     2761 caaacttttg caaatgctac cgcaaccact gcggtttcag cggtttcatc tggtgtgaaa
     2821 aatatcgttg ctgttaccgc ttgcccaact ggcgtggctc atacttttat gtctgcggaa
     2881 gcaatcgaaa attatgccaa agcacagggt tggaacatca aggttgaaac ccgtggtcaa
     2941 gtaggagcag gaaatccaat ttccgccgaa gaagtcgcag cggcagattt agtctttgta
     3001 gctgccgata ttgatgtcga tttggaaaaa ttcaaaggca agccgatgta tcgcacctca
     3061 accggtttag cattgaagaa aaccactcaa gaatttgaaa aagcctttgc tcaagcgaaa
     3121 atttacgaag gtggtgtggc aaaagcggat aatgctgaag ctccaacttc tgagaaaaaa
     3181 gggttatata aacacttgat gaccggtgta tcacatatgt taccgctggt ggtagcaggt
     3241 ggcttgctca tcgctatttc ctttatgttc ggaattgaag cctttaaaga tgaaaccatc
     3301 gcaggcggct tgccgaaagc cttaatggat attggtggcg gtgcggcatt ccacttaatg
     3361 attgcggtat tcgcaggcta tgtagcgttc tcaattgcag accgtccggg gttagctgtc
     3421 ggtcttatcg gcggtatgct tgctaccacc gcaggagcag ggattttagg tggtatcgta
     3481 gccggtttct tagccggtta taccgtaaaa ttcttaaatg gtgcgattca gctaccggca
     3541 agtttaacct cacttaaacc tattttgatt ttaccactct taggctcagc gattgtcggc
     3601 ttactgatga tttatgtcat caacccaccg gtgaaagcat taatggatgc cttagtggaa
     3661 tggttaaaca caatggggca aaccaatgca attattttag gtattattct cggtgcgatg
     3721 atgtgtaccg atatgggtgg tccggtgaat aaagcggctt atacctttgg tgtgggttta
     3781 attgcttcac aacaatatat gccaatggca gcggtgatgg cggcaggtat ggttccacca
     3841 attggtatgg cgattgcgac cctgattgct cgtagcaaat tcaacaccaa ccaacgtgat
     3901 gcaggtaaag cttcattcgt gttaggttta tgctttattt cagaaggggc attaccgttc
     3961 gtggcggcag accctgtgcg tgtaattgcc agctcaatct taggcggtgc aaccgccggt
     4021 gcaatttcaa tggcactagg cattacccta caagccccac acggcggttt attcgtgatt
     4081 ccattcgttt cacaaccgtt aatgtactta gctgctattg ccatcggctc attagtcacc
     4141 ggcgtagtct atgccgctat caaacaaaaa gcagaataaa gcacaaacac aaatacaaac
     4201 aaaaacggag cgaaacgctc cgtttttata tcatattggt acttactgaa ttctatttca
     4261 tcgaaatatc aagtctaaaa tattattttt gcgatcgaga tcgaaaaaat cattttcatc
     4321 actttacgaa taatatcaac tcgttatgat tttgctacga ggagatacta tgcagtttat
     4381 tgaatttacc gatcctgata gtggaatttc ttatcaatac agtgaattta ctattgctaa
     4441 tgtcgcattt atcattaatt tctgctcaga tgccgatgtt atatcgactt tgtccgcatt
     4501 aggcaaagat atcacaaact atataaacac ctattcctgt tgcacaatca aatttatggc
     4561 gaaagagcat ctagaaaata gcggttctaa tattgacatt tatgcccccg cagcgaatca
     4621 tcagttcaaa cgtaaagaaa taattgcttt acaagaaacc cttgagcgtt tattatttga
     4681 gcattatgta cgttttacac cagaaagcta tctcttcatt gccgagagag attcacttaa
     4741 ccgaatgtat cagcgtatgt gtgtgccacg atgtgatttt atgcaatctt tccaagtggt
     4801 ttatcccttg ggcgttaatc aagattgttt cattttaatt acgccaaaag gaaatctaaa
     4861 atgaatcaac aacgtccagt ttccgttcgt ttaaagcaag aaggcttaat cgcttttaag
     4921 caagcctatc agcgagcaaa aaaagcaggt ctattgaaac cggtcaaata atctttaaac
     4981 cgcttgctct acaagcgatt tatttttcct taattatcac accttgctac gaaaactatc
     5041 ccaactcaat aatccaatcg aaaccagcaa acagaccatc aaaatatagg aattggcatc
     5101 gagtttttcg ccgatggcaa aagaaatcag caacatcacc aacggttcaa catagcccag
     5161 taaacctaat acattaatcg gtaataaatt gctcgagagg atataaagaa taaaagcact
     5221 gccacttacc agccccagca atccgaggta gaaataaatt tgcggatttt ctgccactat
     5281 tggcgtcatt tccacttggc tgagataata aagtgcaacg ggtaatacca gtaacaactc
     5341 cacaaaaaaa gtagctaacg tgttgatttg aaaataacgg cgaagggtaa tataaagcgg
     5401 ataacccaac ccagctaccc aagtcgccca cgaaatcgtg ctgttaaaaa acaaactact
     5461 gccaacaccg atgactgcga aaagtagaga aagccatttc aggcgggtaa aatgttcttt
     5521 aaacaccatt tttcctagag ccaccgccac aatcggtaaa agcaagtaac caaacgacac
     5581 ctgcaacgcc tgcccgtgat taggagccca taaaaacagc caaagctgca cgccggtgtt
     5641 gagagcaagg agcaaaatga ccaatacaag cggtggattt tgtcgaattt tttgcaaaag
     5701 atccgcaaaa gccgattgct gtttaaacaa tataatcgcc agcaaaataa acggaatgac
     5761 taccactatc cgaaagccga acatcgcctc tccctctaac gggcgaagca atatcgcaaa
     5821 atagtaaact gctccaaaca gcacattggc tgcaagcgaa gctaaaattc ctttgagcat
     5881 ttggctttcc tcttatcaac aatcaaacaa caagcggttg actttgaaca aaaatttaca
     5941 aatcttatct acgccccata gtatgaaaaa atttgtaagt aagctagcta tattcgattt
     6001 ttcccgatac aatgctccca atttttcact cttttattta tattatagga cttcataatg
     6061 aaaaagattt tttggatttt actgatcgcc atgcttgctg ttggcggtta ttctttaaca
     6121 aaatacaacg atttaatgcg tgcagaagaa gacatcaact ccgtatgggg aaatgttgaa
     6181 tcggcttacc aacgccgtgc ggatttaatt ccaaacttag tgaataccgt aaaaggtcag
     6241 gctaactttg agaaagaaac tttaacctct gtgattgaag ctcgtgcaaa agcaactgcg
     6301 gtaaccattg acccaagcaa tgcaactgaa gagcaaatgg ctaaattcca agaagcccaa
     6361 caaggtgtaa actctgctct ttcacgctta ttggtttcag ttgagaaata ccctgaatta
     6421 aaagcccacg aagcgttttt aaatctacaa gctcaattag aaggtacgga aaaccgcatt
     6481 aacgttgaac gcaataactt taacgaaaaa gtgaaagagt acaacaagca agtgcgtgaa
     6541 ttcccgacta aattagcggc aatgattatg ggctttaaag caaaaccgca atttaaatct
     6601 gaagcaggtt ctgataaagc accaaccgta aacttcaact aattttagtt tcaatttatt
     6661 catattaaaa gcaataagct ctttcaaatc cggtgcttat tgctttattt ttaaggggaa
     6721 caaatgggat tattttcttt tctctccaac aaattaccga tagatacgca acgcattgaa
     6781 caagcaattg ccgatttaga gcaaaaaacc tctgccgaat tgcgtgtggt ggtggaacga
     6841 aaagccaaaa tcggcaaaac cgacaacgcc gctatgttgc gagcaagtga gcttttcgat
     6901 gaattaaaaa tgcgtgaaac ggctgaacat aacggtgtgt tgatctacct ttcattcaag
     6961 cctcactacg ctgcgattat tggcgatgaa ggcattcatc aaaaagtcga taacgatttt
     7021 tggcaaaaaa tctatgccac aatgtgtttg gactgccaac aaggcgatta cacccaagcc
     7081 atttgtgatg caatcaaaat ggtggaagct ccgctcgctc accatttccc ttatcaggct
     7141 gatgataaaa acgagctttc aaacgaggtg gtagtcaaat gatgaaatcc ctttgcaaat
     7201 ttctatctat tttcaaccgc ttgttattgg tgtgcttggc tctgtttagc ctaaatgcca
     7261 cagcggtgac ctacccagag ccgcctaatc cgttttatta tattacggac tacaccaaaa
     7321 acaccttgag ccaacaagaa tggcggacat tagaagatgc cttaattgct aactgtgcca
     7381 agacaagttc gcaaattgcc gtggtgatta ttccaagcac ggaaggcgag gcagtttcaa
     7441 cctatgctca taccctgttt aacaaatggg gaatcggacg gagcaaaaat aacgagaaca
     7501 atggtatatt gttattaatt gccaaaaatg atcgcaaact ctttattgcc accggacgtg
     7561 ggcttgaagg agcgttacct gatgcgattg catcgagcat tatccgcaat gacatcacgc
     7621 cattcttcaa acaagagcaa tatgcagccg gtatcgccca tggcttatcc gccattatgg
     7681 cagccattaa cggggaatat gccccttatg caagttatgg cgaagaaatg caagaatttg
     7741 atgacataga cggcttactc tttttcttgt ttgccggcat tgtgattttc ctaattttcc
     7801 gcccacgagg aaacagtacc tatattagtc ccagctcaat ggatcaacta ggacaaatac
     7861 taagagaaag ccaacgcaga ggtgggggct ttggcggtgg tctcggaggt ggctttgatc
     7921 gaggctcagg tggatttggc ggaggcttcg gtggtggttt tggcggaagc agaggcagtg
     7981 gcgacagctt cggtggtggt tcatcaggcg gtggaggcgc tggaggaagc tggtagtttc
     8041 cgcccaattt aaaacaatac aagcggtcat atttctcaaa aaaattgcgt atttttcgct
     8101 aaacgcacaa aacgctaatg aaaataagac cgcttcctca cttctctaag ctatgccctt
     8161 tttagtaaca atgctacggc ttcacaagct atgccttcac ctcgcccggt aaaccctaat
     8221 ttttctgttg tagtggcttt tacattcact tgtgatatat cgcattgtag atcgtctgcg
     8281 atcacctgtc tcattttatc aatatgcggt cgcatcttcg gagcttgagc aataatggtt
     8341 acatcgacgt taccgacttg atagccctgt tcttgcactt gtcggtaagc ttcaatcaac
     8401 aaaccacgac tatcggcatt tttgtattgc atatcagtat cagggaataa tttgccaata
     8461 tcacctaaag ctgctgcgcc aagcaacgca tctgttaaag cgtgcagcgc tacatctccg
     8521 tcactatgcg caatgaagcc tgtatgataa ggcacttcaa ccccagcaat catcagtggt
     8581 ctatcttcgc caaaagcgtg aacatcaaaa ccgtgtccaa tacgtatcat tttagttctc
     8641 caaattatgt gtaaggtaaa attccgctaa ggctaaatct tcagggcgag tgattttgat
     8701 attatcactt ctacctgaaa ccaattgtgg ctggtagcct gcaagctcca ttgcagatgc
     8761 ttcgtctgtt acctgaagct tattggcaaa agcagaggat aatgcttgtt ttaatgcttg
     8821 agcaggaaaa aattgtgggg ttaaagcgtg ccataaggtt gagcgatctt ctgtgtgtgc
     8881 gattttcgtg ccgtttgctc ttttcatcgt atctaccgct ggaatggcga gaatgccacc
     8941 ttgcggatcg ttaatttgca aaagtttatc taaatctgac cgcttgaggc aagggcgagc
     9001 cgcatcgtga actaatgccc aagcattttc agtgttgatt tcctgtaagg catttagcac
     9061 tgaatctgct ctcgtttctc ctccaaaaac aagttggatc ttaggggatt ttaggagttc
     9121 caatgtggaa taaaaagggt cttttcttgc caccgctaca atcacttttt caacatgagg
     9181 gtgttcaaga aaaatagaca ctgtatgctc taagatagtc ttacccttta attgtaaata
     9241 ttgttttggt ttttctgctt gcatccggct accaactcct gacgccggaa ttactgcaat
     9301 aatttttcgc ttcataatat atcaattatg tattatttgt tttttggtac aattcggtag
     9361 aacatctcgt tctcttttac catttctcgt tcaagtcttg ctctctcttc aagtgcatct
     9421 acgccgttct ttaaatcgta aatttcggct tcaattagtt tattgcgtga agtaagcttt
     9481 gtgttttcta cttttaataa agcaatttct tcttgcactt cttgataatc actccaacca
     9541 ttttttccaa accaaaagct atattggaaa aagccgagta atagggcaaa aaaagtaatt
     9601 aataaacgca tttattttct cttatatgaa atagtaatga actaagcggg ttgattttac
     9661 cttgaatttg caaaaaattc taaaaatctt accgcttgtt acttaaacag gcgatggata
     9721 gtgctaaatg tattcgaaaa attgatataa aacaaacaaa tgcgtatttt aaagcgattt
     9781 ttttaaacta aatgtcaaaa atttgaagta tgtaacattt tttatttttc aattttcgta
     9841 taatcaaccc agttttaaat ttataactat tatgaggtaa ccactatgtt aaatcgtatt
     9901 gaacaagaac ttgcagactt aggcattaca aatgtaaaag aaatcgtgcg taaccctagc
     9961 tatgagcaac tgtttgaaga agagatgaaa tcggatctta aaggttatga aaaaggcgtc
    10021 ctaacaaatt taggcgcagt agcggtagat accggcattt tcacggggcg ttcgccgaaa
    10081 gataaatata tcgtattaga tgaaacgaca aaagataccg tctggtggac atctgatgca
    10141 gctaaaaatg ataataaacc gatgactcaa tctacttggc aaagtttaaa aaccttagtg
    10201 accgatgagt tatctaataa gcgtttattt attattgatg ctttctgtgg tgcaagccct
    10261 gagcatcgca tcaatgtgcg tattattacc caagttgcgt ggcaagctca ctttgtgaaa
    10321 aatatgttta ttcgtccaac agaagaagaa ttaaaagatt tcaaaccgga ttttgtggta
    10381 atgaacggtt cccaagtaac taacccgaac tggaaagagc aaggcttaaa ttcagaaaac
    10441 tttgtggcat ttaatatcac agaaggtgtt cagatcattg gcggtacttg gtacggtggt
    10501 gagatgaaaa aaggtatgtt ctctatgatg aactacttct taccattaaa aggtgtcgct
    10561 tcaatgcact gttcagccaa tgtgggcgaa gaaggtgatg tggcggtttt ctttggttta
    10621 tcaggaaccg gtaaaacgac actatcaacc gatccgaaac gcaaattgat tggtgacgat
    10681 gaacacggtt gggacgaaaa cggcgtattt aactatgaag gtggttgcta tgcgaaaacc
    10741 atcaaccttt ctattgaaaa cgagccggat atttatcgtg caatccgccg tgatgcgtta
    10801 ttagaaaacg tggttgtgcg tgaagatggc actattgatt ttgatgataa atcaaaaaca
    10861 gaaaataccc gtgtgagcta tccgatttat catattgata atattgccgt gccgtcaaaa
    10921 gcaggacacg ctaaaaaagt gattttctta acggcagatg cattcggcgt attgccaccg
    10981 gtgtctaaat taacgcctga acaaactaaa tactacttct tatcaggctt taccgcaaaa
    11041 ttagcaggta cagagcgtgg tattactgag ccaaccccaa ctttctctgc ttgtttcggt
    11101 gcggcgttct tatcactcca cccgacacaa tatgctgaag tgttagtgaa acgtatggaa
    11161 gcagccggtg cggaagccta tttagtgaat accggttgga acggcacagg taaacgtatt
    11221 tcgattaaag atacacgggg tattattgat gccatcttag acggctcaat tgagaaagcg
    11281 gaaatgagta cattaccaat cttcaattta gcaattccaa ctgcgttacc gggtgtagaa
    11341 acccacattt tagaccctcg taacacttat gaagacaaag cacaatggca agctaaagca
    11401 gaagatttag ctggcagatt tgtgaaaaac tttgaaaaat atgcgaccaa cgaggaaggc
    11461 aaagcattaa ttgctgctgg tccgaagtta taagttgtaa ttataagtta taatcgctaa
    11521 aaaattagtt taggactaaa ccttgaatga ggtttagtcc ttttgtataa aggagaagta
    11581 caataatgac aacattccaa ttaaggctga aagccaaaga tgagcttacc ccacacccaa
    11641 cagcacaata ttggcgaaaa tgccaagtgg aaggactatt tgatctgccg tttatggatt
    11701 tagtgtttag agcggcacaa gttcaccgtg aaaattttga tgctaatgcg atccagcttt
    11761 caacgttact ctcaattaaa acaggaggct gtccggaaga ttgcgaatat tgcccccaat
    11821 ctgcccgcta tgatacggga atagaaaagc aaacaatgct tgatgtagag acgattgtag
    11881 aaaaagctaa aattgccaaa gagcgtggag caagccgctt ttgtatgggg gctgcgtggc
    11941 gaggacctag gcctaaagat attaaagtag tctcagaaat catcaatgcg gtgaaatcat
    12001 tggggctaga aacctgtggt actttcggta tgcttgaaga gggaatggca gaagaattaa
    12061 agcaagcagg gctggattac tacaaccata atttagatac cgaccctgaa cgctataaca
    12121 aaattatcca tacccgaaat cacgaagatc gaatggacac tttaggtaaa gttcgcaatg
    12181 ccggcttgaa agtttgctgt ggcggtattg tgggaatgaa cgaaacccgc cccgagcgag
    12241 caggcctaat tgcaagcctc gctaacctcg atcctcaacc tgaaagcgta ccgattaatc
    12301 agttgattaa agtagaaggt acaccgctta ccaatgccga agatttagac tggacagaat
    12361 ttgttcgtac cattgcggta gcaagaatta ctatgcctca aagctttgtc cgactttctg
    12421 ctggcagaac tactatgccg gaggcaatgc aagccctctg ttttatggca ggagcaaatt
    12481 ctattttcta tggcgataaa ttacttacta cagaaaatcc ggaagaagat catgatcgcc
    12541 aattaatgga taaattagat ttatatccgc tacaatatat agcctgagtg ccaatgattt
    12601 tcgcctgaat gaaaattaaa gaatcaatcg ttattttacg caaatttcta acataaaata
    12661 accgcttgca aaattcgttc ttgtcttatt tttaaattta tctataatgt gaggccttac
    12721 gcaagcttgc gtaattcgat ggggcgttat tggttcctcg caatggtgtt cagcttactt
    12781 gatcaggttc ggaagaaagc agtctgggtt gaaatttccg tgtgccgagg gaggctggta
    12841 atgccccacc cttttttcag ttctatcagg agaacgttat gctccagatc acccccattc
    12901 cggcattaaa agataattac atttgggcaa tccgtaacgg gcaagatgtg attattattg
    12961 atccatcaga acatcagcca gcattaaact ttattgcaaa aaatgcgtta aatttaaccg
    13021 ctatcttgat tacccataat caccacgacc atactgatgg ggtgagtggt attgttgagc
    13081 aatatccgaa tatccctgtt tatggtccgc aagaagtggc tgaatttgcc aatgtgattg
    13141 tctcgcctga acaacatatc agcctgtttg gttatgatgt aaggattatt gaaagtggtg
    13201 ggcataccgc agggcatatc agttatttat ttggctatga ttatctgttt tgtggcgatg
    13261 cgttattctc cggcggttgc gggcgggttt tcaccggtga ttaccaagcc caatttgatg
    13321 cgttacaacg ctttaaaaat ctgcctaact cggttaaagc ctacccggct cacgaataca
    13381 ccaagagcaa tttgaaattt gcagaagcgg ttctaccacc aagctgtgta ttatcggaat
    13441 atcaagaaca ggttgatctt ttacgttcgc aaaacaaacc gactttgcca accactattg
    13501 gcttggaaat gcaggtgaac ccgtttatgc aagcggtcga tttagccgaa tttattgcac
    13561 ttcgtcagca aaaagacaat ttttaacctc atatttctaa ttaagcatta aagcctctca
    13621 ctttaatgct ttttggttaa ataaaacctt tgcaaacatc gcttgtcaat tccactctgg
    13681 cttatcctat ggtatagtta cgactatttt tagcttaatt tattatttta gtgagtaaaa
    13741 ttctgtgaac ttcgatcctc aaaatatgcc taagcacgtt gccattatta tggatggcaa
    13801 tggcagatgg gctaagcaga aaggaaaatt acgcattttt ggtcatcaga atggtgtaaa
    13861 ggcagttcgt tctgcagtta gttttgcagc aaagcatcat atccaagttt taaccctcta
    13921 cgcatttagc agtgagaatt ggagcagacc agaaactgaa gtttcagctt taatgtctct
    13981 gtttatgaaa gctttagatt ctgaagttaa acaattacat aaaaataata ttcgcttaaa
    14041 gattataggc gataaatccg cctttagcga aaatttacaa aaacgcattg ccgaatcgga
    14101 aaaattaacc gaaaacaata ctgggctaat cttaaacatt gctgccaact atggtggtta
    14161 ctgggatatt gttcaagctg ctcaacaact agcagtgcac gttaaatctg aacaacttgc
    14221 tgtggagcag attacaccag cattgtttca acaacattta gtgacagaaa accagccgca
    14281 agtggattta ttaattcgaa ccagtggtga gcagcggatc agcaattttc tattatggca
    14341 aattgcttat gccgagctgt tttttagccc ggttttatgg cctgatttta atgatgaggc
    14401 ttttagtgat gcaatttatg cttatcagca acgtgaacgc cgattcggtg gttgttaata
    14461 taaaaagaat aaggaaatac aatgcttaaa gaacgtgtac tttcagcgat tattatgatt
    14521 attgccgtgc tggctgccat attttggctc tcaccacttc ctttaacttt agtgttatcg
    14581 gcaattgttg tggctgcaat gtgggaatgg gctcaatttg ccggctttaa acaccctgtg
    14641 ccacgtgcaa ttgtggcaat ggtgacaatc tgcttattac tttttgcgat cgttgcgaat
    14701 actgattata tccgagccac ccgttttatt actgatgaga ctacccctat cctctttatt
    14761 ggctgtattt ggtggttaat tgcccttgtc ctagtggcaa cttaccccaa ctcggcaaaa
    14821 ctgtgggaaa aatctgttgc agctaaattc ctatttggac ttgctacctt agtgccgttt
    14881 ttaattggca cgctcgcatt gcgtttccat aattatgcat ttgatccata ccaaggaact
    14941 tatttattcc tttacgtctg tttattagtt tggggagctg attcaggtgc ttattttgct
    15001 ggcagagcct ttggcaaaag aaaacttgcc ccaaaagtat ctccgggtaa atcgtgggaa
    15061 ggcgtaattg gtggcgtact cacctctagt ttgattgcct ttaccttttt acaacttaca
    15121 ccggcaaatg tattcggcaa agcattagcc actaccccat ttattttagt ttcggtcggt
    15181 atggttgcta tttcagtctt aggcgatttg gcagaaagta tgtttaaacg ccaagcaggc
    15241 attaaagaca gtagccagtt aattcctggg catggaggta ttttagatcg tattgatagt
    15301 ttaaccgctg ccgttccgtt ttttgctaca ttcttctttt ttgtactata gaatatgacg
    15361 tccatcattg cattttttat tttaatttgc gtactggttt ttgtgcatga atacgggcac
    15421 ttttgggctg ctcgcaaatg cggggtaaag gtgatccgtt tttcgatcgg atttggtaaa
    15481 gtcttattta agaaaaaaga taaacaagga accgaatttg ttttttcact tattcctctg
    15541 ggcggctatg tacaaatgtg gaatgatgaa acggatatca acgctccagc tcaacaagct
    15601 cttaacacaa aatctgtatt gcaacgtgca tttattatta tagccggtcc tgctgcaaat
    15661 tttatttttg cgattttggc atactgggtc gtttttattg ccggtattcc aactgttaaa
    15721 cctgttattg gggaaatttt accaaacact atcgcctccc aagcaagaat tcctaccgaa
    15781 ttggaaatta caaaaatcgg tcatcaatct atccaagatt gggaaagtgc atctttagca
    15841 ctagttggtt ttgtgggcaa taaaaatgta ccgttagagg gaaatatcaa cggcaactca
    15901 acacaaaaat atgaactcga tttatctaac tggagtattg actcagccaa agaaaaccca
    15961 ttaaccgcat taggtattcg ccccaaaagt gcaaaagtca ccgctgaaat taaacaagtt
    16021 gtcgaaaatt ctcctgcaag ccaagtgggt attcaagcag gtgatcgtat tcttcaaatt
    16081 aaccagcagc catttaattg gttcaattta gttgaactgg tacaagcagg taaacctatt
    16141 gaacttaaaa ttgaacaacg aggtcagatt aaagaccttg tcgtccaacc agaaaaaaaa
    16201 gacgaacgct atattatcgg ggtaatacca agttatgagc ctcttgcaga taaatatcgt
    16261 accgaattaa aatatgatat tcttaccgca ttttataaaa gtatcgaaaa agtgtggtct
    16321 cttacccaaa ccatactcca atttatcggt aatttaataa gcggtgattt gtccattaaa
    16381 aatttaggtg ggccaatttc aatggcaaaa ggagccggtg caacagctga aatcggctta
    16441 gtttattacc ttagttttat ggctctaatc agtgtcaatt tgggggtaat gaacttattt
    16501 ccacttttac ccttagatgg tgggcaactt gttttattgg ctgttgaagc aattcgtgga
    16561 aaagcattat cagaaaaaat acaactcaaa ttccaacaaa ttggatttgc attcgtgctg
    16621 agtttaatgt tattcgcctt tgccaacgat ataattcact tttaacaagc ggttaaaaaa
    16681 ggtgactttt ttgcaaaaag caccctgaca tcaaaatcca taatatggat ttaaactata
    16741 ttcttaataa ttttgcaaaa cgatcatagg ataatttcaa tgaaaaaatt attactttcc
    16801 tctcttttaa ttgcaaacgg tgtagttgct gcacctttcg tagtaaaaga cattcgtgtt
    16861 gaaggtgtgc aacctacaac aggcgaatct atcatttcat ctattccggt tagagtaggt
    16921 caaacagcaa cggatactga cgtatctaat gtcgtccgcc atctattcag ccaacaacgt
    16981 tttgcagatg ttcgtgcaac acgagaaggc aatacgcttg tcatcaaagt cgctgaaaaa
    17041 ccgattattg gcaaggtaga gatcgaaggt aaccaagcga ttcctaaaga tgccttagag
    17101 caaaatttaa aggcaaactt aattaaccaa ggtgaaattt ttgatgctgc caagcttgaa
    17161 gcttttaaag aaggactaat cgaacattat cactctaccg gccgttatga agccaaaatt
    17221 gacacatctg tttcgaataa caccgaaggt ggcgttaata ttaagttagc gattaatgaa
    17281 ggtgaagttg ctaaagccaa aacaattaag tttgaaggta ataatgcctt ctctgataaa
    17341 aaattattag aaaacttaga tattcaacct gatgtttctt ggtggaatat ttttgaaagt
    17401 agcaaattcg aacaaaccgc ctatcaaaaa gacttagaaa cattaagaga tttttattta
    17461 aatcgtggct atgcaaaatt tgctatccaa gataccgatg ttcaattcaa tgataataaa
    17521 acggaagttg cattgaccta taaattagat gaagggtcac agtaccatgt cagtgaaatg
    17581 cgcattatcg gtaatacagc caatatggat agccagctca acgccctact aaaagaattc
    17641 aagcctggtc aattattccg taaatcagac cttacacaaa ttgaagaaga gattaaatct
    17701 attttagggg acgcaggtta tggttcagct aaagtagata tttatcctca atttaatgaa
    17761 gaaaataaaa ccgtaaaaat cagttttgtt gtggatgccg gtcgtcgtat ttatgttcgt
    17821 aaaatccgtt ttgaaggtaa tggtgtcact gcagattcaa cattacgtcg tgaaatgcgc
    17881 caacaagaag gtgcttggct ttccacaaac aaagcttctc taggtaaagc tcgtttagaa
    17941 agaaccggtt tctatgaaag tgttgatatg tcaatgccaa atgtagaagg tacagccgat
    18001 caagttgatg tagtgtataa aattaaagaa cgcaataccg gtagtattaa ctttggtatc
    18061 gggtacggca cgaaaaacgg tatcagctat caagcaggaa ttaaacaaga taatttctta
    18121 ggtatggggt caactatcag tctaaatggt acccgtaata actacggtac cagcgttaac
    18181 ctaggctata ccgaacctta ctttactaaa gatggtgtaa gtttaggcgg taatattttc
    18241 tatgaagatt atgataactc agacaatgat tcaatggctt catataaacg ccaaacctat
    18301 ggtattaacg gcacattagg cttcccggta aatgaaaata actcatacta cttaggttta
    18361 ggctatacgc acgataaaat taaaaatgca gcacgtgagt acactcgtga gaaatatgta
    18421 aaatcaatga actttgagtt cgatccagct gccgattatt acaaaaaaat caaagctgat
    18481 gattttgatt tttctctcgg ttggaactac aacagcttga atagaggcta tttcccgact
    18541 gaaggaacta ccgcaaacat tggcggtaaa atcacaattc caggctctga taataaatat
    18601 taccgagtca gtgcagactt tagaaattat tacccgttaa accgtgagca caaatgggta
    18661 atttcaacga aagctagcat tgcttatact aatggatttg gtggtaaaga agttccgttc
    18721 tatcagcttt atactgccgg aggtattggt acactaagag gtttctctta cggtgcagta
    18781 gggcctcaag cgatttacta taatacaaaa tccggcaaat ttgatagcat gaataatgat
    18841 attatcggtg gtaatgcgtt agctgcggca agcttggaat taatcacacc aacgccattt
    18901 gtgagcgaaa aatatcagca caatgtaaga acctctctct ttgttgatgc tgcaagtgca
    18961 tggaatacaa aatggaagaa agatgaatat acgaacttgc ctgactatgg tgatttcaaa
    19021 cgtttccgtg cttccgccgg tattgcattc caatggatgt ctccaatcgg gccattatca
    19081 ttctcttatg cgaaaccaat tcgtaaatat gataatgatg atattgaaca attccagttc
    19141 aacattggta gttcattcta attaaccaca agcggttaat aaatgtaaaa aatttgcaac
    19201 ttagccgctt atttcaaaac tgttcataca aggaaaacaa atgaaaaaat tatttaaaat
    19261 gactggctta gccgtagctt tagcctctac aaccggaatc gcgaatgctg cagatactat
    19321 tggtttcgta gatccaagct atgtattaca aaaccaccct gtattattag atgcttcggc
    19381 aaaatttgat aaattcatga aagaaagcca agaaaaattt gctgctgatg aaaaaaaatt
    19441 agcagatgaa aataaaacct taacggctga gcgcaataaa attaatgaag atgcgcaaaa
    19501 attacaaaat gaacaaaaaa atgtagaagc ttctatcaag aaaaaagtgg cagcattaga
    19561 gaaagatgcg cctcgcttac gttcaaaaga gattcaagca cgtcaaaatg cgattcaaaa
    19621 agaagcaaac gcattccaag ctaaagtaac agcaattcaa aaacgtgaag ctgattttgc
    19681 aaaaaaagca gaagccttcc agaaacgtgc agatgaattc caaaaacgta ttgaacaagc
    19741 gaataaagaa aatggtggca ttaacccaca agaagcgcaa aaacaagcgg ttgatgaagt
    19801 aaatgcaacc attaaagaga tcgcaaaatc gaaaggttac actttagtat tacaaccaca
    19861 agtagcactt tatgctgaag atgaaggtaa agatattact gaagcagtac ttgatgctat
    19921 tgttaaaaaa catccggaaa ttaaaataga aaaacctgca actgaagctc aaccagctac
    19981 agaaaaagaa accaaagctg aagaaactaa accagaagaa gcgaaaaaat aatggcaaat
    20041 ttccgtttaa ttgatttagc ggagcatatc ggcggtactc ttaggggtaa cgccgatttg
    20101 gctattcaaa gtattgctgc tttagataaa gccgacagct cgcaaattac ctttatctca
    20161 aatgcaaaat atcgggaaaa tttgaccgct tgcaatgctg gagctattat cgtcagcccg
    20221 gcagatgtag aattttgccg agcagatcaa aatcttatca tcgttgccaa tccgtatgtt
    20281 gcttatgctc aactggctca atatatggat tctactccga aagcagcgag cgaaatccac
    20341 ccaagtgcgg tgatttcacc tgaagctaaa ctgggtaata acgtatcggt aggggcaaat
    20401 gccgtgattg aaagtggcgt agaattgggc gatgatgccg tgatcggtgc aggctgtttt
    20461 gtgggaaaaa acagtaaaat cggggcaaga acccaacttt gggcaaatgt ttcggtgtac
    20521 cacaatgtac aaatcggagc tgattgcttg attcaatcct caacggttat cgggagtgat
    20581 gggtttggct atgcgaatga caaagggcaa tggattaaaa tcccacaaac cggtggtgtg
    20641 attatcggta atcgtgttga aattggtgct tgcacttgta ttgaccgagg tgcattagat
    20701 ccaaccgtaa tcgaagataa tgtgattatt gataaccttt gccaaatcgc ccataatgta
    20761 cacattggtt ttggcactgc cgttgccggc ggcgtcatta tggcaggcag tctaaaagtt
    20821 ggtcgctttt gccaaattgg tggagcaagt gttatcaacg gtcatatgga aatctgtgat
    20881 ggtgccataa ttaccggaat gggtatggtt atgcgcccaa ttacagaaaa aggaatttac
    20941 tcatcaggta ttccattaca aaccaataaa gaatggcgaa aaaccgcagc acttgtaatg
    21001 aatattgatg aaatgaacaa acgcttaaaa tcgttagaaa aacgttttaa cgattaattt
    21061 tattagaggt cttaaagtga cagaaatgac aactgaaaat cgtgagccaa atattattga
    21121 agtaaccgaa attatggata tgttaccgca tcgctaccct ttcctgttag ttgatcgcgt
    21181 aaccgattat gaagaaggga aatggttaaa agccattaaa aatgtaacct tcaatgaacc
    21241 ttgttttacc gggcattttc ctggcgcacc aatcttccca ggagtattga ttctggaagc
    21301 aatggctcaa gcaactggcg tattagccgt tgccacttat ggtaagttaa gtgaagacga
    21361 actctactat tttgccgcaa ttgacaatgc tcgctttaag cgaccggttg tgccgggcga
    21421 tcaacttcaa cttgaggttg aatttcttaa agaagtacgt ggtattacta aatttaccgg
    21481 taaagcatac gttgatggca aattagtctg tgaagcagat ttaatgtgcg ctcgccgtaa
    21541 ataattcgat ataagcccaa actagaggga acaaactatg cgtctaattg attcaacagc
    21601 aaaaattagc ccgcttgcca tcattgaaga aggtgctgaa attggcgctc acgttgaaat
    21661 tggtccattt tcagtcatcg gtaaagatgt caaaatcggg gctagaacga aaattcactc
    21721 aaatgttgtc attaacggca tgactgaaat tggtgaagat aaccatattt tccaatttgc
    21781 cagcattggt gaaatcaacc aagatctaaa ataccaaggt gaaccaacca aagtggtgat
    21841 cggtaatcgt aaccgtattc gtgaaagtgt tactattcac cgaggtacgg tacaaggcgg
    21901 tggcgtgacg aaaatcggtg atgataactt atttatgatc aacacccaca tcgcacacga
    21961 ctgctctatc ggtaaccgtt gtattatcgc caataatggt acgctagcag gtcacgttac
    22021 cctagatgat ttcgtgattg tgggaggaat gtccgccatt caccaattcg ttgtgattgg
    22081 ttcacacgtt atgcttggag gcggttcaat ggtcagccaa gacgtaccgc cttatgtcat
    22141 ggcacaaggt aaccacgcac gcccatttgg tattaacttt gaagggttaa aacgtcgtgg
    22201 ctttgataaa ccaactatgc acgctattcg caaagtctat aaactgattt actccagcgg
    22261 aaaaacattg gaagagtgcc tagtagaaat tgagcaaatt gcagcaacag aacctgcgat
    22321 tgctattttt aaacaattct tcaaacgttc tacccgtggt attattcgtt aataaacgaa
    22381 accccgaaat caattcgggg tttgttttat caagcgaccg tcgaaccttt caacaatttt
    22441 cgaatccaag ctcgatttgg gctaaggtta tgccaaatat cctcactgat tggcacaggc
    22501 tcattcacaa tcaggcttgc taacaattcc cctagaagtg gtgcagtcgt caaacctcga
    22561 gaagacaggc cgtttaccat atacagattg gtaaaaattt cagcattttc taccgcttgt
    22621 ttccgtctca actggttgta taaattggca tattggcttt tttgctgctc aaaatgatgc
    22681 actgccccaa ccatcggtac acgatcacga aacgccgcac gaataccgac tttggcttta
    22741 ttttcagata aatcaattcc ttgcgtccac tcacaaacgg ttacattttg ctgaagtttt
    22801 gcaacattct cccaatgctc cgataaacta aactcggttt ctgcattatc ccgaatatgg
    22861 cttgctccaa tgcaatgcgt gccataggct gacattggcg ttaaataacc atcataacaa
    22921 agcacacact tcagtttttg taattcgctt gtagtcggaa tttggctcac ttgccctcgt
    22981 accggataca acggaatgcc gttcgcttgg ctaaattcat tcaacgtatg tccatttgcc
    23041 agcacaaccg cttgatgtcg aaccgtttct cccctcgtct gccattgcca cattccatta
    23101 gaaaaggtta aatgctcaac tttgtgattc agtacaatct tcaacccttt ctgctccagc
    23161 caagtaaagc catttctaac aagttgtacc ggtgaaagcc aaccagcttg cggaataaat
    23221 gccccgctgt ttggcacgct taaacctaat ttttcactta attctgcctg tgaacaagat
    23281 tttaataagg tgtcatcagc cgtctgctcc accatttttt ccagtttttt agccgttttc
    23341 tcgtcatagg cgtaaagcac taccccgctt aaattatgct caaactcaat gttggatttc
    23401 agttgttgca agcgttgcaa tgcataatca aaactatgga tataaaactg tacatttcgc
    23461 tcgtcatcat cgcttaactg tgggtaaatc gccccttgta aatttcctga agcatttatt
    23521 gccaaggttt catctttgca atacagcgtg acttgcttgc ctttttctaa cagcgataac
    23581 gcaacgaaga aactcgctac tccgccacca ataattgcaa tgtcatcagc ggtttcattt
    23641 ttggcataaa aataggggta attaggctcg gaaacttggc tatctaacgg tttctcgccc
    23701 caaagcattt ctcgtttttt gccaaatcct ttgcgttttt tcactgcaaa acctgcggct
    23761 tccagccctc gtctgaccat acttgaagcg gtaaaagtag caaaactgcc gccattggca
    23821 cttagtcgaa acatttgcag atataactgt tcgttccaca tttctgggtt tttatcaggc
    23881 gaaaagccat ctaaaaacca agcgtcaatc gtgccgctat aaagatcgcc taattggggt
    23941 aagttttcag caatctcacc gaaccataaa tctaaataaa cctgctcaaa atgataacgt
    24001 tggcaaccta tttggcgagg ctgccaacaa gcggttaaat tttcagataa tgttgcaaat
    24061 tgcggatagc gttggtgaat atcagctaat tggctggccg tcagaggaaa tttctcaaat
    24121 gagataaaat agagtcgttt tagtttactt tgcggaaatg ctgcccgaaa ctgttggaat
    24181 ttgtcagcaa cggctaaaaa attcaagccc gtgccaaagc cggtttccgc aataacaaaa
    24241 gcctctttcg ggtgagattg ccacttttcc cacagttggt taccttcttg aaacacatag
    24301 taactttccg ccaaaccatc ttgggtagaa aaataaatat catcaaattg ctccgacacc
    24361 ggtgtatctg catcattaaa tgtaagtgtc gcaaaagtca gtttacccat catatcccct
    24421 taaaaacaaa acacggaaaa ccccaagatt ttccgtgttt caaccagttc aatagtacca
    24481 atgttagaaa atgttgctgg caaaaataac gatcatacca agtgcgccta caaccgttag
    24541 cattgaataa ccaaaagtac ccattttaca atcctcattg ttaattatga ttaaaacggc
    24601 tttattctag cataatttcc atcgctttga atgcctatgc ttgaataatt ttgccaaaac
    24661 aagcggtcaa tttttgtaaa tcttttacgc ctttggcact ttccacgcca gaatttaaat
    24721 ctaacccgac acagccttga gcaagggctt gctcaatatt ctcagtgcca ataccacctg
    24781 ccaataacgc tttttgtttt aaggtttctg gaatcaacgc ccaattaaag gttttgcctg
    24841 tgccgccttg ctgattgcct actttgctgt ctaatacata acgagcaatc tgtggattat
    24901 cgttaaattc tagattttca acctcaacat caaccgataa ggctttccag atttgagttt
    24961 tactacctaa tttctctgcc agttctgcaa tgtattgctc atcttccgag ccgtgcaatt
    25021 gaactgcaaa taactcaagc tgttttgcca ttttttccac aaattcgacc gcttgatttt
    25081 ggaacacccc cacataacgc aacggtgcat tcaccaccaa ttcttgggct tggcgaagtg
    25141 aaagctggcg aggcgagcct tcggcaaaaa ttaaaccgcc atataatgcc ccttgctcat
    25201 aaaccgcttt cacatcttgc acacgggtta agccacacac tttgttttca ccaaaaatca
    25261 ccgcccgcac cgcattattg agatcggcac ttcccattaa actgctgccg attaaaaaag
    25321 catgaacata cggcttaatg tttttcactt gctggtgatc gttaataccc gattctgaaa
    25381 tcaaacagac atcagccgaa atttgggctt ggtatttttc caccaaacgc acaatgcggt
    25441 tcatatcaat cgtgagcgtg tgcaaatcac ggttattaac gccaattacc ttcgccccta
    25501 aggctaaggc acgttcaaat tccgcctccg tgctggtttc agtcaaaacg cccattccta
    25561 actcgtgagc cagtgtggca agttcacggt aggtttcatc atttaccacc gataacatca
    25621 ataaaatcgc atcagcatta taaaaacggg caaggtaaac ctggtatgcc gaaatcataa
    25681 aatctttaca caaaatcggc tgtgtggttt ggcgtttgac ttgatcgata taacggaaat
    25741 cgccttgaaa atattgctca tcggttaaaa ccgaaatcgc cgcagcgtaa tttttataca
    25801 cttgggcaat actgtctaaa tcgaactcag cacgaattaa cccttttgac ggtgaagctt
    25861 ttttacattc taaaatataa gctggttctt ggtgtgtgcc tttggcaaga gccgcataga
    25921 aatcatggtc gctttttaca attttgtgct gaaattcact taacggaaag gcttgctctt
    25981 tttgtgccac ccaaatggct ttatcttgta cgatcttttg taaaatcgtc ggttggtttg
    26041 gttgagcgtt atcttgaacg atgttttgca tataaattcc tagagcgaaa tcggtttgaa
    26101 tggtaaaatc tgcccttatt tttacccgaa aaagtctcat ttcacaagca aaactaagat
    26161 gaaatcacaa gttatacagc atttatctta tttagaaatc gccctgagag ttaatcaact
    26221 ttgggaggcg acaccaccaa gccctgaagc cttagccaat gagcaacctt tctgcgtgga
    26281 aaccttaacc ccaacccaat ggctacaatg gatttttatt cccagaatgc gggccatttt
    26341 agatgcaaat gccgatttac ctcgcaattt tgcaatcacc ccttatttag aagaggcatt
    26401 gaaaaacgaa ggttatttac aagcgatttg tgaaccgcta ttaggtttgg aaaagttgtt
    26461 gaaagattaa cttctctctc agttctttta ttaatctgac aaattcgttg atagtgccag
    26521 cgtccacgct ggtactaatt ttaacggtta attaatcaaa atttggcaca agcgaggacg
    26581 cttgcgccat catagagatt tgataaatta tacttaatgt attatgacct tagatatttt
    26641 ataccaagac aactcgctta tcgccatcaa caaacctgcc ggagtgttgg tgcatcgttc
    26701 ttggttagat aaacacgaaa cggtgtttgc aatgcaaacc ctgagggatc aaatcgggca
    26761 acacgttttt ccgattcacc gccttgaccg cccaacctca ggtgtattgc tgtttgctct
    26821 caacagcgaa accgcccgaa taatgagcga gcagtttgaa caacacctag tacaaaaaac
    26881 ttatttggcg gtggtgcgtg gctatttaca aggttcggca caaattgatt atccgctcaa
    26941 agtgatttta gataaaattg cggataaatt ttctcaggaa aaagaggctc aagcggcgat
    27001 tactgattat aaaggcttag caacggttga aatgccttac cctgtcggca agcaccaaac
    27061 ctctcgttat agtttggttg aacttagccc taaaaccggg cggaaacatc agcttcgccg
    27121 ccacctgaaa cacctgttcc acccgattat gggagacagc aaatatggcg acttacacca
    27181 aaaccgtgct ttagttgaaa aatcaggcgt aagtcgttta atgttacacg cccataaatt
    27241 gcaatttcag cacccgaaaa atttgcaaaa aatagagata attgcatcgc ttgatgagca
    27301 atggcaacgc ctctttgcat tttttgactg gaactttact caatattatt agacaaaaaa
    27361 gaggattgaa tggataattc acttttatca ttgacacacg agcaacaaca agccgcagta
    27421 gaagaaattc aaaaactgat ggcacaaggc atcagtgccg gagaggcaat tcaaattatt
    27481 gctaatcaat tacgtgacaa atatcaaata ttggagaaat caaacaatga ataaattatg
    27541 gacagtgctt gccctaacaa taacttccca ctatagcttt gctgccgctg aaaaaatagt
    27601 cactaaagat ttaccggcag aaggaaaacc tgcagtcgtg ctacaggttt ttgatgaaag
    27661 tgaaaaaatt gcaaaaccta ttaagggaaa taagctcttt attagcaaaa aacaaacaag
    27721 gctttgctgg cacagtatta atcttcctgt acaaaataaa gttactattg cagaagcttt
    27781 ctatgcccct gctgcaatga aattagcttc tcccggctct aaaattaatt cttctgcaga
    27841 caagaaaaat catactatca ttactgaaat aaaccttgca aataatcaag tattaaatcg
    27901 ttgctggggt tttgataaaa ctgaccctgt cggtaaatac aaaatggaaa ttcaaattaa
    27961 cgatcacatt ttcaaaggtt tagaatttga aattgtaaaa taacctaaaa gccacagagt
    28021 aacaccctgt ggctttttgc taaatcattg tttttaaatt ggttaaattg tgcagcaaat
    28081 aatctttact cttcacaaag gctctcgcct gttgccagtt gctaaattgt tgctgagtgc
    28141 attgattaaa acgtaccagc acttccaaac tttcattgcc gacacaaata aaatcagcta
    28201 ataattgggt taatttttca ctgttttcac catccattgc agttgcaatt ttctgctccc
    28261 atttaaccgc ttgtccgagc aaataacccc gctgggcttt gcttaaatta ctcaaccaca
    28321 tcccatccgc ttttggcatt gcctcaacca aagtaaataa gtcgcctaga tttccttgct
    28381 tgatttcaaa ctccaattca caaatcggct cttcaccaaa atgattttta atgatgccct
    28441 gatctaacgc tacctcaatg tcagacatcc ccacttgcac caaccaagtt ttacgagtga
    28501 aatcggtgct gaatatcgct tgcaagcttt ctgcaatctg ctctgaattt tcaaacggca
    28561 actggtattt ttccactaat gtttgaaaat ccggctggct attgggtaaa gctaaattat
    28621 attccggacg aatatgcaaa ccgcctacaa tttccccttg tgtttttaac gtgatttcat
    28681 attgttgatt cacagaacgc acccgcagcc ccattttttg cgtggcaaaa aattgctcgg
    28741 gcgtatcata ataggtgttg cctaacaatt ccgtttgatg agcaagcaca gggaatggcg
    28801 aggtttgatt caagtagttt tccactaacg ccacattctg ctgttccaac attattttca
    28861 gttcgatttc tgcttgtttt tggttttcca tttcacacgc ccctgcaacg ttgtataatc
    28921 aagcggttat tttatcaata aattttgcaa aatgttttca aaaattcacc ataaactgaa
    28981 taactttgtc cagcgtggac tcgacaacca tttacgcctc gccgttaccg gcttaagccg
    29041 tagtggcaaa acggcattta ttaccagctt ggttgatcag cttttgcata tcaacaaagg
    29101 cggtaattcg catttaaacc tgtttgcgcc tgcacgccac gggcaaattc tatcggtaaa
    29161 acgcgttgag caaggggatt taactattcc ccgctttgaa tatgataaaa accgccaaag
    29221 ccttgaaaat caaccacctc aatggcctga atccaccact ggcattagcg aaattcgcct
    29281 tgcgattcgc taccagcggc aacattctct gctacgtcat attaaagaaa ccggcacgct
    29341 ttatttggat attttcgatt acccgggcga atggctgtta gatttacccc tgctctccct
    29401 ttcctataaa gaatggtcgc aaacgcaaca aaccatacat aaagatgagc gtgcagagct
    29461 tgccacacct tggttacaag cggttaaaaa actcgatctt tttgcaaaaa ccgatgaaaa
    29521 tttactggca gaattcagcc aacaatacac cgattatttg ctcgcctgca aagctcaagg
    29581 aatgcaatat attcagccgg ggcgatttgt gttgccaact gaaaatgcca aaggtgcacc
    29641 ggtattccaa ttttttccgt tattagattt aagcgaagct gagtgggaaa agttggaaca
    29701 aagcgacaga aacagtattt tccataccct caaaaaacgc tatgagcatt accagaaaaa
    29761 aatcgtcaaa ccgttttatg aagattactt ctctcaattt gaccgccaag tgattttggc
    29821 agactgcctc acaccgttaa attatggcta taacgaattt atggaaatga aattagggtt
    29881 acagcaactg tttaaacatt tccattatgg caatcgttcg ctatttcacc gtctgttttc
    29941 gtccaacatt gataaattgc tatttatcgc aacaaaggca gatcacatta ctagcgacca
    30001 agtgccgaat ttggaaagcc taatgcgaca attagtgcaa gaagggggaa gacacgcaga
    30061 atttgatggt atcgaaaccg gctatttagc catttcctcg attcaagcaa ccgatgcggt
    30121 gaaagtgact cagcaagata aaatcattaa agcgataaga gggatccgtt ccagcgatag
    30181 aaaacaagtg acactctacc ctggcagcgt gccaaatcgc atacccgata aaaattactg
    30241 gcaatttaac cgttttgaat tcgaccaatt cgagcccaag caacttgatt atagccaagc
    30301 gattccacac ttcagaatgg attcggtgct acaattttta ttggcggata tgtttgagta
    30361 aaatcttgtt gcatatttcc attaaaggta taaaatttta tacattatga atactgtaat
    30421 ttcccaacga aaaccaattc actgggttgg atcaacctta gatgatattc gtgaatttcc
    30481 ggataacatt aaaagagaac tcggttttga tcttgattta gttcagcaag gcttattacc
    30541 gagggatttt aaagcgatgg caaatttggg ttcaggcgta atggaaattc gagtaaaaga
    30601 tccctcaggg gcttttcgct tagtgtattt agctaaattt aaagatgcaa tttactgttt
    30661 acacgctttc caaaagaaaa cgcaaaaaac agcccctaaa gacattgctg tcattaaagc
    30721 acgctatgct gccgtaaagg agttagaaaa tgaataatat tgatactaaa attcgccata
    30781 ctacagaagc tcagggtaat gtttttgaag atcttggttt ccctattgat gaagctcaaa
    30841 aattgaaatc tgccagtcag caactgattg aaactaaact gatgctaatg aatgaaatga
    30901 gcaactggat tgataaaaat aatctcaaac aatcagaagc ggcttctatt ctaggtgtta
    30961 gccgccctcg aatttctgat atggtcaatg gcaagttaga aaagtttacc ctagatacct
    31021 tagtcacttt tgttgcaaaa accggcaaaa caatccaatt gcaattatcc tgatatttgc
    31081 aaaattttac tcaaattcaa ccgcttgttg cttttatcat tcactaacaa ggttatttca
    31141 agtaaaattg tgactaattt tttattaata aacacaaatt atggcaaaaa aacctaaagt
    31201 tgcatcaaat acgattgcgt taaataaacg tgccagacac gaatatttca ttgaagatga
    31261 aattgaagcc ggcttagagc tacagggctg ggaagtcaaa gcattgcgtg ccggaaaagg
    31321 caatatcagc gatagctatg tcatctttcg ccacggcgaa gccttcttat tcggggcaat
    31381 gattacgcct ttgaatatgg catcaaccca tattgtcagc gacccgaccc gcacccgcaa
    31441 acttctactg aataaacgtg agttagactc actgttcggt aaagttaatc gtgaaggtta
    31501 taccattgtt gccacctcaa tgtattggaa aaatgcgtgg gtgaaagtaa aaatcggctt
    31561 agccaaaggg aaaaaactgc acgataaacg tgaagatatt aaagaccgtg aatggcaagt
    31621 ggctaaacag cgtattatga aaaacgccaa tcgtggctaa atgaataatt accctctccc
    31681 cttgtgggag agggacagaa aaattgcgtt cagcaatttt tcagggaaag ggggatttgt
    31741 aaaagttcaa ggaaaaacaa cgcttgccct ctctctgaaa aatatttctg aacgaaatat
    31801 ttttcggtct ctctcccata aagggagaga gtgaaacaca aatttaaact aaggaacata
    31861 caatgatcga ccaaaaccta cttcgtacca atttagaaga cgttgctaca gctcttaaaa
    31921 tcaaacgtaa ttttatttta gatgtagagc gagtaaaaac ccttgaagaa cagcgtaaaa
    31981 cgctacaagt taaaaccgaa accttacaag cagaacgcaa cactcgctcc aaaaacatcg
    32041 gtgcggcaaa agctcgtggc gaagatattt cagctttatt agccgaagta gattcaatgg
    32101 gcaacgaatt agacacggca aaagtagaat tggataaagt acaggcagaa atccgtgagt
    32161 tgttgctttc tgtgccaaac ttaccggcag atgaagtacc actcggtaaa gacgatagcg
    32221 aaaacttaga agtattacgt tggggcgaac cacgtcaatt cgactttgaa gttcaagatc
    32281 acgttaccct tggcgaaaac ttaaacggtt tagattttgc tgccggtgta aaattaaccg
    32341 ccagccgttt tgtggtaatg aaaggtaaac ttgcccgctt acaccgtgca ttatctcaat
    32401 ttatgttgga tttacacact gaacaacacg gctatgtgga aaccaatgtg ccatttttag
    32461 tcaatcacga cactctatac ggcacaggtc agctaccaaa atttggcgaa gatttattcc
    32521 atactcaacc attaacaggg caagatccaa acgaggtgca acgcccattc ggtttgattc
    32581 caaccgctga agtgccagta acgaacttag tgcgagatga aatcattgat gaagacagct
    32641 taccactgcg ttataccgcc cacacccctt gtttccgtgc agaagccggt tcttatgggc
    32701 gtgatactcg tggtttaatt cgtatgcacc aatttgaaaa agtggaaatg gtgcaaattg
    32761 tcgcccctga aaaatcaatg gaagccttag aagaattaac cggtcacgca gaaaaagtct
    32821 tacagctttt aggcttgcca taccgcaaag tgctactctg cactggtgat atgggctttg
    32881 gtgcagcaaa aacctacgac ttagaagttt ggctaccggc acaaaacact taccgtgaga
    32941 tttcttcttg ctcaaatatg tgggatttcc aagcccgccg aatgtctgca cgttgtaaag
    33001 ctaaaggcga caagaaaact cgcttggttc acaccttaaa cggctcaggt ttagcggttg
    33061 gtcgcacact ggtcgctgtg ttagaaaact accaaaatgc cgatggctct attactgtgc
    33121 ctgaggtgtt aagaccttat atgggtggtt tggaagtaat taccgcttaa gattaataaa
    33181 tgaaaccaat ctcagaaatg gggttggttt ttttaataaa tcttatccct aatctttttc
    33241 aggataattc ataaaaattt cagtaactac tcggcggttt tgcactgtat ctaaacgaat
    33301 aggatttttc attctcccta aacgaaatgc aataatggtg acttttttcg gttcatctat
    33361 tttatctaat tgatagaata ccattatttc ccgttgataa accgctcgct ttctgaaacg
    33421 taaatccttg cgaaatgcga cacctgcttt tggataaaac tgtaaaccat tgatgatatt
    33481 cgtttgagta tgctccgaaa ataatccata gaaaataaac tctaatagat tatttttaaa
    33541 atcaacacta accatctaac tgctcccaag cagttaaatc tcctcgtgat aaacgttcag
    33601 caatatcagc ataaaattgt ttcggtactt ccctttttac ttggtattga gctgattgtt
    33661 cttctaataa atgttcttct atcatcttga tttcttctgt tgtccactct tcatcttctt
    33721 tatgtacaac aaaatcggta tctacaatca caatagacat acctagctcc ttcaagtact
    33781 ggttatatat tctgtatttt gcctgttcta aattcagctg tctagctttt ctgttactca
    33841 caatttgcaa atttttcatc aaattccacc gcttgccatt caaaaaaagg cgtttttgcg
    33901 gtatcctatc ggcaattttt tcagttaaat ttaaaggtta aattttatgc aacagcagta
    33961 taacccaagt gagattgaac ctaaggttca gcgttattgg gcagaaaata aagtttttaa
    34021 agcagttaaa gacgttacca aagagaaata ctattgcctt tcaatgttgc cttatccgtc
    34081 aggtaagcta catatggggc acgttcgtaa ctacaccatt ggtgatgtag tgtctcgtta
    34141 tcagcgtatg atcggtaaaa atgtattaca gccgatgggt tgggacgctt tcggtttacc
    34201 ggcggaaggt gctgcggtga aaaataatac cgcaccggca aaatggactt acgaaaacat
    34261 cgaatatatg aaaggtcagc ttaaaatgtt gggcttctct tatgactggg atcgtgaagt
    34321 caccacttgc cgtccggaat actacaaatg ggagcaatgg ttcttcacag aactttataa
    34381 aaaaggctta gtgtataaaa aaacctcaac cgtaaactgg tgtccgaatg atgaaactgt
    34441 gcttgccaac gagcaagttc acgaaggttg ttgctggcgt tgtgacaccc cagtggaaca
    34501 gcgtgaaatt ccacaatggt ttatcaaaat cactgactat gctgaagaat tactcaatca
    34561 gttagataat ctcccacagt ggccggatca agtaaaaacc atgcaacgca actggatcgg
    34621 tcgttccgaa ggggtagaaa tcacctttaa aattgccggt tcaaacgtag aattaccggt
    34681 ttacactacc cgtccggata ccttcttcgg cgtaagctat gtggcgattg ctgcggctca
    34741 cccattagca gaattagctg cacaaaataa cccggcattg gctgaattta tccgtgaagc
    34801 gaaaaacacc aaagtggcag aagcagaatt agccaccatg gagaaaaaag gaatggcaac
    34861 cggcttgttc gccattcacc cgttaacagg aaaagaagta ccggtttggg ttgctaactt
    34921 tgtgttaatg cactacggta caggtgcggt aatggcggtt ccggctcacg atgagcgtga
    34981 ctttgaattt gcacaaaaat acgatttgca aattaatcag gtaattcaac cgcttgatgg
    35041 ctcagagtgg gatttcagca aagccgctta caccgaacac ggtaaattaa tcaactctgc
    35101 cgagtttgac ggcttggaat ttgatgtggc tttcactgcg attgccgata aattagaggc
    35161 aatgggtgta ggtaaacgcc aagtgaattt ccgtctgcgt gactggggtg tttctcgtca
    35221 acgttattgg ggtgcaccaa tcccaatgat gaccacagaa gagggcgaag tggttaccgt
    35281 tccattacaa gatttaccgg tgattctccc tgaagatgtg gtaatgaacg gcgtgcaaag
    35341 cccaatcaaa gccgacccag agtgggcgaa aaccacttac aacggcaaac cggcattgcg
    35401 tgaaaccgat accttcgata cctttatgga gtcctcttgg tattatgcac gttatacttg
    35461 cccacaatat cacgaaggaa tgttagattc agacgaggca aactactggc taccggtcga
    35521 tcaatatatc ggcggtattg aacacgccac aatgcacttg ctctacttcc gtttcttcca
    35581 taaattgttg cgtgatgcgg gtattttaaa ttcggacgaa ccggcgacta aactgttatg
    35641 ccaaggtatg gtgcttgccg atgcgttcta ctacaccagc ccaactaacg agcgtatttg
    35701 ggtcagcccg acacaagtca ccttagaacg tgatgagaaa ggtcgtatca tcaaagcaac
    35761 cgatccacaa gggcgtgagc tggttcacag cggtatgact aaaatgtcga aatcaaagaa
    35821 caacggtatc gatccgcaag aaatggtgga aaaatatggt gctgacacag ttcgcttgtt
    35881 tatgatgttt gcctcccctg cggaaatgac attagaatgg caagaatccg gcgttgaagg
    35941 ggcaaaacgt ttcttaggtc gtgtttggaa tttagtttat agctatgccc aaaatccggc
    36001 aacgactgca ttagatgtga atgccttaga caaggatcaa aaagaacttc gccgtgatgt
    36061 acacaaaacg attgctaagg tgagtgatga tattggtcgt cgtcaaacct tcaatacagc
    36121 gattgctgcg gtgatggaat tgatgaacaa gctcaccaaa gccccacttg aaaccgaaca
    36181 agataaagcc gtaatggcag aagctttaag tgcggtggtg cgtatgcttt acccaatcac
    36241 gccacatatc tgctttgagt tatggcaagt gttaggtaat gaacaaacca tcgattttgc
    36301 cccttgggta caagccgatg aatccgcaat ggtggaagat gaaaaattag tggtagtaca
    36361 agtcaacgga aaagtgcgtg gcaaaatcac tgtttcagct actgctacgg aagatgaagt
    36421 taaagctatc gctaaagccg atccaaacgt tgctaaattc ttagatggtc agcagattgt
    36481 aaaagaaatc tacgttccat ttaaaatgtt gagctttgcg gttaaggcgt aacaaacaca
    36541 ctctccctta tatgggagag agaccgataa atatttcgtg cagaaatatt tatcagagag
    36601 agggtacaag cggttatttt cttggaaaat tttgcaaaaa atagccccct ctccctgctt
    36661 tttcttctaa acgaagaaaa acctgtccct ctcccacaag gggagagggg aataaacaag
    36721 gaaatctcat tatgattaaa aaactctctc tcatcgctgt ttttgctctt accgcctgcg
    36781 gttggcactt taaaaacaat gaggtattac ctgaatcgtt cagaacatta acctttgaaa
    36841 gtgcagatca acacagcgaa atgtctcgaa ttttacgcaa tcagttacaa ctaagcgatg
    36901 taaaattagt gcctagcacg gctaatgtgg caaaattacg tttggtttca acctcaacag
    36961 acagcaaagt ggtttctgtg tttaaacaag ctcgtgaagc agaaaaaatc ttaacgctaa
    37021 acgttgatgc gattgccgat attccaaata aagggcaata ccctttagaa gtttcggttc
    37081 atcgtacttt ctttgatgac tctcgtgcag ctttggcaaa gtctgctgaa aaagagatga
    37141 ttatgaaaga tatgtatgaa caagcctctc gccaattaat tatcaaaatg gcgggcttaa
    37201 aaaaagaact ctcaaaataa tcattgtagg ggcgaaatat gtttcgccca ttgtttatct
    37261 gtatgcaaaa aatctttccg gaaacacttc aattttcatt aaacaaagga ctacagccct
    37321 tttatctatt aacagggaat gatctgctat tggtgaatga aaccaaagat gccattattc
    37381 acaccgcccg tctcaacggt tttgatgaaa aaaaagaagt tgaaatcaaa aacgatacta
    37441 actgggaaga acttttcgaa gcagctcaat caatgggatt gttttttgca cgccaaatta
    37501 tggtgctgaa ttttccggat tcccccacag cgacacagtt taaaaaactg gctgagcttt
    37561 gtgcctttat tcatagtgat ttgctcttta tcctgcactt acctaaattt tccaaaacaa
    37621 tggaaaaaca ggcttggttc acgcaaattg agctaaatct cgtgcaaatt aactgccaaa
    37681 caccggaact tagcaaactt ccacaatggg tcagtcatcg agcaaaagcg atgaatttgc
    37741 aaattgaaaa tgaagcaaac caactccttt gttatagcta cgaaggcaat ctactggcgc
    37801 ttaaacaggc attacaactg ctacaactca atgcaactga tggaaaaatc acgctgacaa
    37861 aagcccaaga agtggttgaa cactccgccc aatttactcc atttcaatgg attgatgcat
    37921 tatttgaagg aaaaatccaa agagctcaac gcattttgta ccatctgcaa aatgaagaag
    37981 tacaagcggt cgttttatta agaattgtgc aaaaagagtt gatgatttta ctcgaaatca
    38041 ctcgcaaccc aaccgcagtc gtttccagcg aacaatcact ttttatcggt aatttacgaa
    38101 cagaatttga ccgcttgaaa atttggcaaa accgcagacc tttttacaac cagatcactc
    38161 aacgactgac ttaccaaaaa ctttacgccc taatccaaca actggctgaa ttagagcgta
    38221 aggtgaaaca agaatttagc gatgatattt ggcaagaatt agagcgtttt tccgctcaat
    38281 ttacctaact aatacttttc taaatcttcg ctaaacaact ccgcttcttc actggcgata
    38341 gagtgctttt ctgccgccca atcgcctaaa tcaataattt gacaacgctc gctacaaaac
    38401 gggcggtatt tactttcttt actccacacc acttcttttt cacaagtcgg gcagtttaca
    38461 atagtttctg gcattctttt tccttttttg ctaatgctaa gtatttataa tgtaaggctt
    38521 gaacctgctc tttaattaaa agcaagccct gttcaaatgg caagttattt tcaatcacat
    38581 catcagcata acttaatctt tcttcacggc tgacttgggc tgccataata tttttaatgg
    38641 tttcaatttt actgttatca cgtttggttg ctctttccag ttggatttca ggagaaacat
    38701 caacaaccaa tatacgatca caatattcgg tgagcttatt ttcaattaaa agcggcacga
    38761 cccaaatcac ataacaagcg gtcgattctt gcaatttttt taccatttct tctcgaatgg
    38821 cggggtgaag taaattattg agccacgttt tttcctcttc attgttaaac acaatttggc
    38881 gaagtttagt gcgttctaat gctttttcag cggttaagat ctcttcacca aaatgctcta
    38941 caatcttggc taaaagcggt gtacccggtt caacaacttg gcgagccacc acatcagcat
    39001 caattacctc taccccaaga gctgaaaata aatcagacac tgtggttttg ccactgccta
    39061 ttccaccggt taagcctaca acgtaagtca taaaaattga ttcctcaaaa taaaaacaaa
    39121 ccaattctag taattaatcc ctctgctttc aagcattagc accagcaaca tcgctgtgct
    39181 aataaacgga ataaacgcca attttgctaa tttctgcttt ttcattagcc aataagccaa
    39241 gtaataacca atccctagca ggctggcggt taatatcaat aagagcattt tttcgagccg
    39301 aaagagtggg gataacgcaa ccaataacaa catatcgccc gagccaaatg cctccttttt
    39361 aaacataagc tgtgaaacca agccaatcaa caggcaaaaa gcaagggtaa aggtaaaagt
    39421 ttggtgttgg aaatcggcta aactctccca taacaccaac aaaaatataa gcacgaggta
    39481 gcgaatatcc gttaggtaat agcacatatc cagcagtgat aaaaaacaga gcagaataaa
    39541 aatcgtgccg ataatagggc tttccgagca gagcataatc aatggaaaaa ggagaaaaaa
    39601 tagatttgcc gatcggggtt gtttcggttg tagcaccgat tgagccaaaa actgttgctc
    39661 ggttaagcca atattcacta atgaagttgt ttcttggtaa atttggcgat tgactcgaat
    39721 ggcaaatcga gggatctccg ctttgagcca aaccgcaatg aagagggaaa acagtattaa
    39781 catcgctact ccaccaaagc ccccatatca aaaatcggta aatacagccc aacaataata
    39841 gtgccgacaa tcacgcccat tatcaacatt agcatcggtt ctaatagctg agacaaaata
    39901 tcaatttggt aatctaattt ttgttggtac atctcactaa tatgctcaca cattttcgcc
    39961 acattgccac ttttctcccc aacctcaagc atttgtgcca tctcagcacc aaacacattc
    40021 gggttgatcc cttgtgaaaa tttgtagcct tgttgtaaca aattaagcat agtgccaatt
    40081 tcttgctgta aaatcgggtc atcatttttc tcggataaaa acgacctcaa ggcaacatca
    40141 agcggaatat gagcattcag cattaaggca atattttggc tgaaaaagat aatgcgagat
    40201 tgctcaataa ttcggctaaa cagtggcatt ttagcccata gagccatttt ccactttgcg
    40261 actaacctgc tcttttttgc aaaaaacagg taaaaaatga ccgctagtag taacgtgcca
    40321 agtaatactg tgccttgctc aatcaagcat tcggaaaggg taaataaaat atcggtaatg
    40381 aggggtaaag ttttgtcttt tgagccataa agttgggcaa actgcggtac aatcaaaacc
    40441 aatagcccga tagataaagc gagcgaaatc agcaacacaa tcaccgggta aaacaggatt
    40501 ttcttcactt ttttcgccaa tttttccaat ttcgctcggc tttcagctaa attagtcagc
    40561 ataatgccca gttttccgct ttgttcgccc attttgatta gctgaatttc ctgattggtc
    40621 acaaattcac ccaatttctc caacgattgt gaaaaagcat agccactttc aatatgctga
    40681 atcagctcat taagccatag ataaaggcgg atatttcggc agttttgcaa caacatagat
    40741 aatgcctgtt ttaacggcat ggcagaatta accaacaatg caagctgtga tagcaagcta
    40801 ttcacctctt cttttttcgg gtttgctgaa agcacaaaat ttcggctaat ccgaatatgc
    40861 tgataacctt gtgccagcaa aaggttttcc aacatgtctc gattcgttgc caaccgcttg
    40921 ccccgctgtt tttgcccaaa tcggctctgg gcttgccaat gaaattcata gattttcgtc
    40981 attgcctaag caatttctct ttttgtggtt caaaatgaat atctgaggcg ttgtgttgca
    41041 aacagaactt aaataaattc tctaaaattt ggataatcgg atcgtttcta tccacttgtt
    41101 ccgaatgagc caatgaatac gccgtattct cctcataaat ctcactctgc cgactactct
    41161 gctcaggcga aagggcattg agtaaaaact tcaattcatc ggaggaaatc aaaacaggct
    41221 caatctgttt gtggtagata aacgcaaaaa tctcacaggc attgagattt tgcatatcat
    41281 caatccctag ccaaagctgt tcttctgttt cttgcagcgg aatggctaaa tatcgcaata
    41341 aaatctgctt ttcattgcaa tttttctgcc actgctctgc tgaaatctcg atgaaccttt
    41401 ggctgtttaa atccgttacc gaatactcca ttttgatttc ctcacctcaa attagccgtt
    41461 tggtgtaaca gttgtgctac agaaattagc tggaaatagg ctcgtatcat tgccactaca
    41521 acttgccgtc caactaatcg tattatttga gaacgacggt gttaaggtat agccataacc
    41581 attcagagag cctttgccgg ttaccgtaat cacgcctttt gttaccgcaa ttgagtttag
    41641 gtatttagtg gtattactac tggttttatt cgcctgaatc ccattcgtgc caccggagca
    41701 gttatccaac ccgccactgt tgtaaataca gacttcaacg tctgatttat acgaagcaga
    41761 tgcttgtaat aactccgata acgccgcctt ttgggtgtat gagttatagg aagggatcgc
    41821 aatagtggca agaatggcaa taatcgcaat cacgatcatc aactcaatga gggtaaatgc
    41881 ccgatgcagt tggcgaatgc caagcggtct aaaatgtaca attttttgca tataaattcc
    41941 ttataaattg caccaacaaa ttgtggcgaa tcaagtgtgc aaattttttg cctgctttgc
    42001 gaccggcaaa ttttaatttt tcgacgcaga tcgaaaaaat aaaattttta tctgtttatc
    42061 catacagttt tttgttagaa tttgccaaat ttactcaatt aggaatcaag aatggcaaaa
    42121 gcacctaaaa ccgcttatgt ttgtaacgat tgcggggctg aatattcccg ttggatgggg
    42181 caatgtaagg aatgtaaggc ttggaatacc atcagtgaag tgcggttgat ttccagcaaa
    42241 gaagcggcga aatctgaccg ctttagcggc tatgccggtg aaacgtcagg caaagtacaa
    42301 acgctgtctg acatcagctt gcaggaagtg cctcgcttta gcagtggctt taacgagctg
    42361 gatcgtgtac tcggtggcgg cgtagtgccg gggtcagcaa ttctgatcgg cggtcacccg
    42421 ggggcgggga aaagtacgtt attactgcaa gtaatgtgcg gtttagccca acatctgcca
    42481 acgctgtatg tcaccggtga agagtcgtta caacaagttg caatgcgggc aaatcactta
    42541 ggcttaccaa cggcaaatct gaaaatgttg tctgaaacct ctgtcgagca tatttgcaat
    42601 attgcagatc aagaaaagcc caaaattatg gtgattgact cgattcaggt gatgcacttg
    42661 tcggatattc agtcctcacc cggcagtgtt tcacaagtgc gtgaatgtgc atctttcctt
    42721 acccgctacg ccaaaacccg ccaagtggcg attattatgg ttgggcacgt cactaaagat
    42781 ggcacgcttg ccggcccgaa agtgttggaa cacgccatcg atgcttcctt gctgttagaa
    42841 ggcgaatccg attcccgttt ccgtactttg cgtagccaga aaaatcgttt tggtgccgtc
    42901 aatgaattgg gcgtatttgc gatgaccgaa caagggctaa aagaggttaa aaacccatct
    42961 gcgatttttt taagccgtag cgaagagcaa acgccgggca gttcggtgat ggtgttatgg
    43021 gaaggaacac gcccattgtt ggttgaaatt caagccttag tcgatcactc aatgctggca
    43081 aaccctcgcc gtgtggcggt tggcttagat cataaccgtt tatcgctatt acttgcggtg
    43141 ctacaccgac acggtggctt gcagatgtcg gatcaagatg tgtttgtaaa tgtggtcggt
    43201 ggggtgaaag tcacggaaac cagtgccgat ttagccttaa ttttggcgtt aatttccagc
    43261 ttccgtaacc gtccattgcc gcaagatttg gtgatttttg gggaagtcgg cttagcaggg
    43321 gaaatccgcc cggttaccag tgggcaagag cggatcagcg aagccgcaaa acacggcttt
    43381 aaacgagcga taattcctca cggcaatgtc ccgaaaaagg caattaaaga tatgcaggtg
    43441 ttcaccgtga aaaaactcag tgatgcgtta gatattctgt ataatctcta aaatcaagaa
    43501 ccgcttgtaa gtctgtctta caagcggtct gttttaggta aaaatttacg aatgtgcggc
    43561 agttggtcta ttgcctttgg aaatatagta taaattaata cacaccacca acgcatttaa
    43621 gccggtgacc ggaatcgagc caatcagcaa accataaaca acgaaacagg cacaacccag
    43681 cgaattcacc acccgcagtt taatcacatc ttttaataaa aaagaacagg caactaaaat
    43741 catcgccaca tagccgagta tttcaacata gtccatttag aacctcctca aataaaataa
    43801 actgccgata ttttaaaggc tgttttttta tttgtatcta gctctaaaaa tagcaaaggt
    43861 ttgcgttcac atttttactt ttaaccgctt agttattaaa cagattttcg ttctaaacac
    43921 ataaaacggc aacggaaagg gttattttca tcaatttctg accacttttc ttctactaac
    43981 gcccaatttt gttcatcaaa ttcaaagaac gtatcccctt caatgtctgc ttgaatctca
    44041 gttaaataaa gtctttctgc tagtggtaag gcttgcttaa acagttcccc cccaccaata
    44101 atcattattt cagctgtatt tgcaaaattt ttcgctaatt caaccgcttg ttcgagcgat
    44161 tgtaccgcat aagccccttc caccgtaaaa cctgaacggg aaagaataat attagggcgt
    44221 tttggcaata acctgccgat agattcatag gttttccgcc ccataatcac cggtttgccg
    44281 agcgtgtttt ggcgaaaccg ggctaaatct accggcaaat gccacggcat ttggttatct
    44341 ttgccaatca ccttgttgat tgttcgggca acaataatgc tgattttcat tttttctcct
    44401 gttatgcaaa ttggtttgat tttatatcaa attaagcgtg attttatacc ctaaaagtga
    44461 tacttttggc aacattattt ttagttacaa gtgaacagat tatgtcaaaa actatcgtga
    44521 taaaatttgg caccagcact ctcacacacg gcactaaaag tttaagccgt ccttatatgt
    44581 tagagctggt aaagctcaat tacaccaaca gcatcgtgtg attgtggtga catccggagc
    44641 tgccgctgcc ggtcgggact atttaggaca ccctgaactc cctaaaacct tagcctctaa
    44701 gcaaatgtta gcagcggtcg ggcaaagtca gctcattcga gtgtgggaaa atttattcga
    44761 tatttataat atccatatcg ggcagatgct cttaacccga gccgatctgg acgatcgtga
    44821 acgtttcctc aatgcccgtg atacccttga tgccctgctt gcacaaaaaa tcattccggt
    44881 gattaatgaa aacgatgccg ttgctaccga agaatttaaa gtaggcgata acgataattt
    44941 atcggcttta gttgcgattt tggctcaagc agatcagctc tatttattaa ccgaccaaga
    45001 aggcttattc agtgccgatc ctcgctcaaa ccctgatgct aaattgctct cggtggtgga
    45061 aaaaatcacg cctgaaatcc gccaaattgc cggtggtagt tcaaccggtt taggcacggg
    45121 cggaatgagt accaaaatta ctgctgctga tattgctacc cgctccggtg tggaaaccat
    45181 catcgcctcc ggttctcgcc caaatgtgtt agttgattta gcaaacgggc aaaacatcgg
    45241 cagtaaattt ttagtccaat ctgaccgctt ggaaggcaga aaacgctggt tatttgctgc
    45301 tccgcaagtg ggtgaaattg tggtagattt cggggcggaa caagccttgc ttcaacataa
    45361 atcattactg ccggtgggag tttctgccat caaaggcgaa tttactcgag gtgaagtaat
    45421 caaaattttc agccaagacg gcaaagcctt agcactcggc attgcccgtt atagcagtga
    45481 ggcattgctg cgaattaaag gtaagaaatc aaaagaaatt gaatcgctcc ttggttatga
    45541 atttggttct gttgcagtgc atagtgacga aatggtggtg tattaatgga attgggaatt
    45601 gatgttttag caatcttgtt tgccgttgcg acccttgccg gctttatcga tgccatcgct
    45661 ggcggcggtg gcttactcac tattcctgca ttaatggcag cagggcttcc tccggcaatg
    45721 gcacttggca cgaataaatt acaggcgtgt ggcggatcac tctcttcctc actctatttt
    45781 attcgcaaaa aagctgttaa tttaaaacaa atttggttgc taattctatg cactttttta
    45841 ggctctgccg ccggtactat ttttgtgcaa atgatcaatg tcgatttctt aaaaacattg
    45901 ttgcctttct taattctgat tatcggcatc tattttttgg tcagccctaa aattggcgat
    45961 gaagatcgta aacaacgcat tagctttacc ctatttgcct ttaccgccgc tgtcgctctc
    46021 ggtttttatg atggaatgtt cggaccggca accggctctt ttatgactct ggcatttatt
    46081 ttgctgctcg gcttcaacct ctctaaagcc gtagcacacg ccaaagtgat taattttacc
    46141 tccaactttg cctcattaat tttctttacg cttggtggtg cggtaatgtg gaaaatcggc
    46201 ttaattatga tggtcgggca atttattggc ggcacactag gtgcgaaaat ggtgatgaca
    46261 aaaggcaaaa aattaatccg tccgatgcta gtgactatgt cttttatgat ggtcggcaaa
    46321 atgctctacg agcaaggaat ttttaattaa caatgaataa agcaaaacgt attgagattt
    46381 taacccgttt acgcaatgaa aatccaaaac cgacaactga actcaattac agtaatccgt
    46441 ttgaattatt aattgccgtg attctatccg cccaagcgac cgataaaggc gtaaataaag
    46501 ccaccgataa gctcttccct gtcgccaaca cgccacaagc gattttagat ttaggcgtag
    46561 atgggctaaa agagtacatc aaaactatcg gcttatttaa cagcaaggca gaaaatatta
    46621 tcaagacctg ccgagatctg atcgaaaaac ataacggcga agtgcctgaa gacagagatg
    46681 ccctcgaagc ccttgccggt gttggcagaa aaaccgccaa tgtggtgatg aataccgcat
    46741 tcggacaccc tacgattgca gtcgataccc atattttcag ggtgtcgaac cgcacgaact
    46801 tcgctcccgg caaaaatgta gttcaggtag aagaaaaact gctcaaagtt gtgccggacg
    46861 aatttaaagt cgatgttcac cattggttga ttttacacgg acgctacact tgcattgccc
    46921 gtaagcctcg ttgtggttct tgtattattg aagatttatg tgagtttaaa gagaagacgg
    46981 aataacatta tctggtggta tttaatgaat aactcccctc tttagaaaag taggggctgg
    47041 gggagatttg atactatttc aacatttcgt atgagcgtat agaaattctg ccaaatcttc
    47101 cctatcccct ctttgctaaa gaggggaact agatcgagcg taaaatataa caagcggtca
    47161 tttttttgag attttttgca aatggatatt tatttagtcg gtggagcagt gcgggatcaa
    47221 cttcttgggc tgccagtgaa agatagagat tttttagtgg ttggcgcaac tgccgaacaa
    47281 cttttagccc aaggatttca acaagttggg gcagattttc cggtgttttt acaccctgaa
    47341 accaaagaag aatatgccct tgctcgccaa gaacgcaaga acggcaatgg ttacaacggc
    47401 tttatttgcg atttctcccc aaacgtcacg cttgagcaag atttgatccg ccgagattta
    47461 accattaacg ccatcgccca agatgaaaac agcacacttt ttgatcctta tggcggtgtg
    47521 caagatttag aaaatcggct actccgccac gtttctcctg cattcagcga agatccgcta
    47581 cgggtgctac gggttgcccg ctttgccgcc cgttttcatt catttggttt taccattgct
    47641 cctgaaaccc tgaaattaat gcgagagatg gtacaaagcg gtgaattgaa acatttaacc
    47701 gctgaacgtg tgtggttgga aacacagaaa gcctttgaaa ccgataatcc gcacgtttat
    47761 tttgacattt tacgcttaat tggggcatta aaagtgctat tccctgaact ggatcgtctg
    47821 tttggcgtac cacaaccacc tcaacaccac cctgaaattg actccggcaa acacactcta
    47881 atggtgctac aacaggcaaa aagacttgca aaaaaagcgg aaaatccgac cgctttactc
    47941 tttgcagccc tttgccacga cttaggcaaa ggcttaacgc ctgctgatat tttgcctcat
    48001 cactacggac acgaagtcaa aggcattcaa ccaacccgag agttagccaa tcggttaaaa
    48061 atcccaactg agattaaaga ttttgccctt ttagtgaccg aataccacac gcattgccat
    48121 aaaatggcgg aacttcgccc tgaaacggta ataaaactgt ttaacagcct agatgtgtgg
    48181 cgtaaaccaa accgcttttt tgatttcctg ttcgcctgtg aagcggatgc tagagggcga
    48241 ttaggttttg aacagcggaa ttacccccaa cctgaattgg cgaaaaaata ttaccaagcc
    48301 gcaatcgaaa ttgatgtgca gcaagttatt caagacggtt ttgaaaaaca agcaattcgg
    48361 gaagagctga ataaacgcag agtgtatgcg gtaagaagca tcaagctaga tagcgaccta
    48421 ataaaccatt aggttatccg ccactttctc aaaatcaatt cccaaagttc aagttggtta
    48481 aatgtatgga ttctttaaaa ggtggcgtta ttttagtgaa tttataatgt tcctatgctc
    48541 ttgattgttg tagccacaat ttcagggtaa agatcagcaa taacccaatg ccgaaattgg
    48601 caatagtgaa gccggctaac ccaataaaag ataaaggttc aaattgataa aattcaatcg
    48661 cacctcttgc cattgcagct aaaccaaatg aaaatgccca gaaacccatc gagaagccat
    48721 tttcagctat ccatttgagg tttcgtaaaa taaaacagaa ttgtaagaat ccatatcccc
    48781 ataacatttt tgccaacaag tctaattctc cacccataga aaaataggca gaagcgccca
    48841 caaatgccgg agcaagaaca attcctaaag atggtctagc aatcggaaaa agcggactaa
    48901 gccgaattct ttgtaacata gtgggttcat atactaacca ggaaattatg ccaatgccta
    48961 aaaataaaga tgcaatttca ctgtagccaa ttaagcttaa tgaacttgcc atagtgaagc
    49021 tccctgcaat tggcggtagg taatgtaccg ggtgtagcgt ttccggcaaa aattgtgtgc
    49081 ctttccataa tccaccaata ataaaaacca agaaaattaa atgcacaatg acgcctaaaa
    49141 aaatcaatag ttcgcctaaa taaaaatccc atacatagag cacatcaccg cttatcatgg
    49201 ttgtcattgt cactaaggaa aataaacaac attgcactgg gtgcataaat tctgctttaa
    49261 tctgctcaaa acaaaaaaac acacgataca cataacagcc taataaggct acccaaagta
    49321 tgactgacgt tccagcaatg atattaccaa ttgttgtagc ataaggagtg ataggcgttg
    49381 catttaacca ggcaaggcct aacgccccca gccctaatgg cattgcaaaa aagcctgtag
    49441 ttattggaaa aggtttagat tcactcataa atttatcctc atattgaaat aatgcataac
    49501 tgtattcggc tttataacag tcatatgtaa aaaattttat ttttctaacc gcttgtaata
    49561 agaaaaacct aaagcacttg ctttaggttc ctactactat tcatactctt ctagccagat
    49621 agttaaaatc gcttcaagaa tatgttcatt tgatgcttcc ggatcatcat cgaaatcttc
    49681 catttcacaa atccatttat gcatatctgt aaaacgaacc gtggtcgggt ctaaatccgg
    49741 gttcatatca tacagatttt cagcgatcat tcgggtatct gtccatttca ttagtgcgct
    49801 gcctcatttg cgtgatttaa attatatttt ggaatttcaa caaccaaatc ttcttcacca
    49861 acaatacatt ggcaacttaa acggctgtct atttccaatc cccaagcttt atccagcata
    49921 tcttcttctt gatctgaagt atcatttaac gaatcaaaac cctcacgaat taccacgtgg
    49981 caagtggtac aagcacaaga acagtcgcaa gcgtgatgaa tttcaacgcc tgcttcgtgt
    50041 gctacttcta ataaattatc tccggcttta gcttcaacaa ccataccttc cgggcaaaat
    50101 tcttcgtgtg gaagaaaaac aatttttggc attttaaagt ttccttatta ctaatcccat
    50161 tcaatattat ccagatgttc gccgatgaag tttaaaatct cttcctcatt ttcaaccaga
    50221 taaacaataa tcttctttaa ttcccttgct ttctctttac ttttctcgga aagcggatag
    50281 gtaacataat aacatcctac gtccggatct tcttctaata actctaatag gcttggacga
    50341 taaatactaa gataagcccg taaaaatgca gcccagttat aaccgttcat ataggcaaca
    50401 tcatattcag tattaatccg ctcgcccaac tcaaaaatgc ggttatcctc taaatcgaat
    50461 tcaaccgcaa cggttctgaa ttgttctgaa atctcggttt ttacatagtt agacatactg
    50521 cctccttatg ctaaatcgtc cattttttta ccggctaatg ctttttgaat tgataaattc
    50581 atacgccgtg ctgcaaattc ttgcgtagct aaatccacct ctttgatacc ttgctgaatt
    50641 gcaaagcgat cagtaccttc ttttaattcg attaaacggg ctaattgtgc ttcaatcgct
    50701 tggaactcct ccacactcaa cactgcagag ccatcttctt tcaatgccgt taccacgctg
    50761 tcaatcactc ggtcggcttc tactcgctgt tcaactaact ggcgggcttc catatcttct
    50821 ttggcatttg ccattgagga tttaatcatc tgcgtaactt cttcatcggt taagccataa
    50881 gacggtttga tttgaattga agcctgcact ttggtcgatt tttccattgc agtcacgttt
    50941 aataaaccgt ctgcatcaac ttggtaagtt acccgaacct gtgcaacccc tgctgccatt
    51001 gccggaatgc cacgcaaagt gattttaccg agagagcgac aatcttcgac taattcacgc
    51061 tcaccttgta aaacgtggat tgtcatcgcc gtttgaccgt ctttaccggt agtaaactct
    51121 tgagctcgag ctactgggat agtagtgttg cgtggaataa ttttctccac caaaccaccc
    51181 atcgtttcaa taccaagcga aagtggcaca acatcaagca acaacatatc ggaatccggt
    51241 ttgtttccaa ctaaaatatc cgcctgcact gccgcaccaa tggcaacaac tttatccggg
    51301 tcgatagagg ttaatggcgt tttaccgaaa aactcgccga cttgttcacg cacaaacggt
    51361 acacgggtcg aaccgcctac cattaccact tcacgaacct cttctgcttc aactccggca
    51421 tctttcaagg ctcggcgaca agtcatcagc gagcgtttta caagcggttg aattagctca
    51481 ttaaattgcg aacggcttac tacgcctgtc caatttgcaa atttcacttc aaattcaacc
    51541 gcttgcgaaa gtgcgacttt ggtttgagtt gccaaagtta ataattcacg ctgctcgctt
    51601 gccgtttgag gtttgtaatt tgcctgttca gcaatccatt ccgctaatag gtggtcgaaa
    51661 tcatcgccac cgagtgcggt atcacctgcg gttgctaata cttcaaacac acctttgcgt
    51721 aaacgcaaaa tagataaatc gaaagtaccg ccacctaaat cgtaaacggc aatcacacct
    51781 tcttgtccgc tttctaaacc ataagcaatc gctgctgccg ttggttcatt gagcaaacgt
    51841 aatacattta aacccgcaag acgtgcggca tctttggtac tttggcgttg tgcgtcatca
    51901 aaataagccg gtacggtaat taccacgcct gaaagctcac cggctaaacg cttttcggca
    51961 aattgtgcca agtggcttaa aatatccgcc gaaacttcaa tcgggctttt attaccttgc
    52021 gctgtttgga ttaaaggtaa accgttttcg ctcgcgacaa attgataagg taaattttga
    52081 taacgttgct gaacatctgc cagagaacgc ccaatgagac gtttagctga aatgacggta
    52141 tttttcgggt caagtgcagc tttggcaaag gcttcaatcc caactgtttt ttctgtttcc
    52201 gcataatgca ctactgacgg cactaatgct ctttcttgtt catcaagcaa tacctgagtc
    52261 tgcccgctac gcacagttgc cactaatgaa ttggttgtac ctagatcaat tcctaccgct
    52321 aatttatgtt gatgtggtgc agcggtttga ccgggttcag aaatttgtaa taatgccatt
    52381 tatttatctc tttatctttc taacttagtt ctctattgta ttaaatggag tgaaatatat
    52441 tgtttaagag aagctggaga ttcccctctc cctgattttt cttctgaacg aagaaaaatc
    52501 tatccctctc ccacaagggg agagggttat tctttcaaaa attcaaaaca actaaaaaat
    52561 tagcattctc cttttgtagg agaaaatgtt gttctttcaa aattctaaaa taaccgcaaa
    52621 attaactctc gccccttgtg ggagagagac agataaatca ttcgttcaga atgatttatc
    52681 agagagaggg gaaattaccc tctcgtaatt tcataaaaaa ttgtatctaa aacagcctct
    52741 agatcgctat gaatttgatt attccaaaat cttaaaaccc tgaacccctg accgtttaaa
    52801 aaatgagttc gtagattatc atagttttgt tgatctaaat gttgtgaacc atctaattca
    52861 ataactaatt tcgctgaaaa gcaaacaaaa tcgacaatat agttacctat aacttgttgc
    52921 cgtttaaatt ttatcgctaa aaatcgtttt gctcttaatg cttgccaaag aaccttctct
    52981 gcttctgtca tattagtccg aagctgttta gctctttggc ataaaattgc tttcattttt
    53041 tattcctctt ttttaattta gtataaaagg aataaaaaat ataatttgag cgatttttgt
    53101 gatctaaatc gaaaatcaga aaatttcttt cgttctaaaa aaataagcta aacagcctat
    53161 atttcagcct ctcttacaaa cacttaagcc accgaatatc ccatattttc aggggcaaat
    53221 tcgccttggt agtggcgttc aatcggaacg gcgattttac ttgtaagatc cagcacttga
    53281 tgcccttgta atttctctac atcggtttgc cagttttccc aacgcaaatc ctgataaaaa
    53341 tggtttaaat ctccggctaa tgcccagcct agaaattctg aataacctaa ttgggtgttt
    53401 tcccattttt tagcttttgg atgataataa taaactttgc caagatctga gccgattccg
    53461 ccggcattaa tggcaaaata gccaccgatt gcatcatccg ctaccagcaa gtggcttggt
    53521 tgttcgccag attgtttaaa agttttgcca aagttccaat caaataagcc tcgaggcaat
    53581 ttttcgttgc ctgagcctaa aatgcgtaac caaccgtggt caataaatac gccaccggtt
    53641 tcatacacca ttgcccctag cggtgagcga gtagaaagtt gcataccaac caatgcactg
    53701 ccggcatctt cagggtaact cgctaaaatt tcgtaatgat ttttggcttg ggtaaaccag
    53761 tctcttaaaa ttaaccaagc cgattgttta tctaataatt gttctaaatt tttcatttgc
    53821 aaaatttcct tagaatttga ccgcttgcga aaaccataca aatgtaggat taatagtcaa
    53881 agaatttttc ttctactttc tcaatctgaa taattaattt tttaaagtaa cggagcttgt
    53941 cggttaacgc attggctttt tgccagtcgg ctgtatttaa cgtttgttca agctgttcta
    54001 atactgcttt ttgttccgct ttaatctgtt ttaaaaagac ggtcagttcg gtttcgtctt
    54061 tacgatgctc aatggtttcc agtttttcgt gccattcgag ttgctgcatt aagaaatcca
    54121 catctcgcat acttttttct tcgagatttt tggcttcacc tgtatggatt tcaatcatcg
    54181 cttctgcccg taaaatcgga tctttaagaa tattgagtgc ctcattgaca tcagcagatt
    54241 tttgcaccgc ttctaactgt tcagcacttg atttgtgggc aaagttatct gggtgaagct
    54301 gtttctgtaa agcaagataa cgctcagaaa gctgggcgtt atcaagttga aattgaacgg
    54361 gtaaatcaaa taaagtaaaa gggttattca ttacagttcc ttacacacta aaactttcgc
    54421 cacagccgca ttcgttttta acattcgggt tggtgtattt aaagccttcg tttaagcctt
    54481 ctttcacaaa atccagctgc gtaccgttta agtaagtcag gcttttttca tcgacaataa
    54541 cttttacgcc gtgttgttcg aaaacctgat cgtcttcatt taatacatca acaaattcaa
    54601 gcacataggc aagccccgaa caaccggaag ttttcacacc aagccttagc ccgatacctt
    54661 tacctctgtt ttctaagaat gtacgaactc ggtttgcggc agcttctgtt aaggtaatgc
    54721 tcatagtttt ccttatgtga atggattaaa tcaagataga aatagcaaat gcaagcggtt
    54781 aaattttgca aattttttgc aaaaatcgac cgcttgcatt gattgtatca tattacttag
    54841 cttgtttctc tttgtagtct gcaattgcag ctttgattgc atcttctgct aagattgaac
    54901 agtgaacttt taccggtggt aattctaact cttcagcgat atcactgttt ttaatcgcac
    54961 ctgcttcctc taatgattta ccttttaccc attcggtaat gagagaactt gatgcgattg
    55021 cagaaccaca accgtatgct ttaaagcgtg catcttcaat gataccttga tcgttcactt
    55081 taatttgtaa acgtaaaata tcaccacaag ccggtgctcc caccatacct gtaccggtgt
    55141 ctgatgcttc tttatcaaaa gtccctacgt tgcgtgggtt ttcgtaatga tcaattactt
    55201 tttcgctata tgccattttt gtattccttt tatttcctat ttccggcgaa acctatttcg
    55261 cccctacatt caatttacta tttgtgatga aagcttattt tgtaggggca aatattattt
    55321 gcccttgcaa aatttttctg aattagtggt gattccattc gattttagac aaatctacac
    55381 cttctttgaa catttcccaa agaggcgaaa gctcacgcaa tttcacgata gcttttttca
    55441 cgatttcaat agtatgatcg atttcttctt cagtcgtcca acgacctaaa gtgaaacgga
    55501 ttgagctgtg agctaattca tcgtcacgac cgattgcacg taacacataa gatggctcta
    55561 aacttgcaga agtacaagct gaacctgatg atactgcgat atcacgtaat gacatcatta
    55621 acgattcgcc ctcaacaaag ttaaagctga tgtttaggtt tgaaccgata cgtttgcctt
    55681 cttccattga accgtttaca tatacttctt caatatcttt aaagccgtta tataaacgat
    55741 cacgtaacac ggttaaacga gccatttccg ttgccatttc ttctttagcg atacgatatg
    55801 cttcacccat acctacaatt tggtgaacag gcaatgtacc cgaacgcata ccacgctcgt
    55861 gaccgccacc gtgaataatt gcttctaaac gcacacgtgg tttacgacaa acatatagac
    55921 cgccgatacc ttttggtccg tataatttgt ggcttgagaa agacattaaa tcaacattta
    55981 agtcttgtac attcacttcg attttaccaa cagactgggt cgcatcaacg tggaaaatga
    56041 ttttcttcgc acggcagatt gcaccgatct ctttaatcgg ttggattacg cccatttcgt
    56101 tatttacgtg cattaccgaa actaaaattg tgtccggacg aatagccgct tttaatttag
    56161 ctaaatctaa aataccgtct tcttcagggt ctaagtaagt cacttcaaaa ccttcacgct
    56221 ctaactgacg gcaagtatct aatactgctt tatgttcggt tttaacagtg ataatgtgtt
    56281 tacctttggt ttgatagaaa tgagccgcac ctttgatggc taagttatcc gactctgttg
    56341 caccagaagt gaaaacgatt tcacggctgt ctgcaccgat taaatcggca atttggttac
    56401 gagccacatc aaccgcttct tccgcttccc aaccaaattt gtgtgagcga gaagcagggt
    56461 taccaaagat accgtctttg gtcatatatt ccatcatttt tttcgcaaca cgttcgtcca
    56521 ttggtgtggt tgctgcgtaa tccaaataaa ttggtaattt cattgttact cctagttaaa
    56581 acaacccaag cggtcatttt tgataaaaaa tttgcaatta gtgatgatga ggatgatcgt
    56641 gacaatgctc tttttcacaa tcgtgatcag cgtgttctgc ggctaaatcc gcaactgaaa
    56701 ttgtccctaa aaactgctca atttgatctt ctaaccgctc ccacaaagaa tgcgttaaac
    56761 actgagaatc tttacggcaa ttaccactac ctttacattt ggtgacatca atattttcat
    56821 tcacggcgga gatgatcata cccacgctaa tctcttccgg ttttttacct aattgatacc
    56881 caccacccgg tccacgaacg ctctgcacga taccgtcacg gcgaagttga gcaaacagtt
    56941 gctctaaata agacagtgaa atcgcttggc gatctgaaat atcggctaag ctaaccggct
    57001 ctagttttcc gtgtaaagca atatctaaaa tggcggttac tgcataacgc ccttttgagg
    57061 taagcttcat aaaatatcct cattgattat ccagaaaatc ttctgaaaca gttgctaaat
    57121 tttgatatac cccaccaatt tagtcaatca tttaggacta attagtgtaa aaggttttat
    57181 atattaaaac agattaaaac aataacgctg attatacgaa aaaagagccg aaaataccaa
    57241 aataccaaag ataaacagtt catagaccgc acaatttcac tcttatttgc tcctaactga
    57301 tcggaacagt tgaaatttaa ttgatagaga gtacttcgac acataaaatc tgcactttct
    57361 tcttataact tttatgaatt attcattcta aaatatatat tttttaagag atttcctatg
    57421 aaaatgaaaa actttagcaa aactttaatc gcttcattag tagcattcag ctcagccggt
    57481 gcatctgctg ccgcattcca attagctgaa atttcaacat ccggtttagg tagagcttac
    57541 gcaggtaatg ccgctgtagc cgataacgct tctgttgttg caaccaaccc tgcgttaatg
    57601 acgttattta aacaaaccga aatttctgcc ggtggtattt tcgtagatgc tgatgtaaat
    57661 attgatggaa agctcaatgc tacaggtgca gatgcctcac ataaaaatgt cattcctacc
    57721 gctattgttc caaatgctta tatcgtttca cctatcaatg agcgcctttc tattggtggt
    57781 ggcgtaaatg taaattatgg tttgatatct gaatttgacc ctaactattc tgctggtttc
    57841 ttaggtggtc gtacatcatt aagtgctgtg aatgttaatt ttagtgcggc ttatgattta
    57901 ggttatggtt ttgtattagg ggcaggtttg aatgcagtac acgcaaaagc agaattagga
    57961 cgtttcttag gtgccggtgc ggcacgtttt gctccagcta aacaattttt ggaagacaag
    58021 aaagtacaag tacaaagtgc aattcaaggt ttaaaagctc ttgaggcagg tatcgcagca
    58081 ggtaataccg ctcttgaagc tcaaaaaaca caagtattag ctcaagtaaa cggtttatta
    58141 aaatctcaaa atttaaacca aaccatcacg aattctgctc aattagaacg tttggttaat
    58201 ggcattcaaa ataccaatgc aagttcaaca attcataaac ttaaaggcga taaatgggca
    58261 ttgggttgga atgttggctt ggtttataat atcaatgaaa gaaaccgttt aggttttact
    58321 taccactctg aaattgatct taaatttaaa ggcaaatatt ctaataccgt tcctgtagtt
    58381 attcctaaga tggtagatac cattaccggc ggtgcagaga ttgatggtac actaagatta
    58441 cgcctaccgg cattctggga agtgtcaggt taccacaaac taaccgataa acttgctgca
    58501 caatacagct ataaacgcac agactggagc aaattccaaa gcctagaagc ttatgatatg
    58561 caaggtaacc gcctattgca caaaaccgag aactttaatg actctcaacg tattgcatta
    58621 ggcttgtctt atgatgtgaa tgaaatgcta acattgcgta caggtgtagc atttgatgaa
    58681 agtgcaagtg taactcatcc atcaatctca attccggaca ctgatcgtgc ttggtattct
    58741 gtaggtgcaa ccgtgcgttt cacgccaaac ctatctgctg atgtaggtta ctcacatctt
    58801 cgtggtagca acctgacctt ctctgaagac ggtttagcca cattcaagag caaagctcgt
    58861 gcaaatcttt acggtttaaa cgtaaactac aaattctaat ttgatgaatt aaggtttaaa
    58921 gaggtgtaaa atcaattaca cctctttttt tattggcata aaaacatgaa atctcaaatt
    58981 tactacgatt actacccaag ccctatcggg caattattgc ttttagccac agaagaaggc
    59041 ttgatttaca ttgagctagg gcaagagcaa caaaccacct cgcttgataa tttcctttcc
    59101 gctcaagctg caagtggtca gattttagaa attttttgca aaaccaaaga aattttagac
    59161 cgctattttg ccggcgagcc attggatttt cagcagttgg attttcttgc cccgcaaggc
    59221 actccattcc agcaatcagt ttggaaaatt ttgcgtgaaa tcccttacgg gcaaactact
    59281 acttatggcg aaattgccac ccaactaggc aagccaagtg cgatgcgagc cgtcggcggt
    59341 gcagttgggc gaaacccgat ttcgatttta gtgccttgcc atagggtatt agggaaaaat
    59401 caagccttaa ccggattcgg tggtggcttg ccgaataagc gttttctatt acagctggaa
    59461 gatattacct ataaagataa aggcattgaa tttgtaaaac cgaaaaccaa gaaatggtaa
    59521 atacgttttg atagcacaag cgtccacgct tgtgcttcag atattaaaat tggtacaagc
    59581 gtggacgctt gcaccatcgt aacatttcaa atttactaaa tgtccccctt gcttctaaca
    59641 tattccttag ctaattgcaa atccatctgc catttggaac aaatcatttc cacccagtgt
    59701 gcaatatttt gctcccactg ctcgccgtta tcggattgag caagctgagc agtttgttgt
    59761 agctgatgta atccgactga tgctaatgct cccttaatct tatgagcctc gtccgccgtt
    59821 aatttacggc tttccacaga atttgtggtt tgccaatcac ttaaataacg ctgtaaattt
    59881 gccaaataag tgggcattaa atcagcaaat aaatccatat tggcaagcac attctctttc
    59941 cccattaccc caatcaattc attaagaatt gtaatgctat aaggtaaatt ctcagaacct
    60001 ctctctacaa gcggctgttt ttcttcattt ttttgcaaaa aatcatctcc aaaatgttgg
    60061 ttgagacaac gcattaattc atctaaagag agcggtttgt gtagcacatc gtccatacct
    60121 tgtgcttggt actcctgccg gctttggatc acatttgccg tcaaagcaac caacagcggt
    60181 aaatagtcaa tttcctcgtt ttcatattgc aatcttaatt gctgtgcaat ttcaaaaccg
    60241 gtggtatccg gcagttgaat atcaagtaaa atcagatcgt agctgttctg tgcaaaatgt
    60301 tggaacgttt cttcaccact cattgctaca tcaaccacgc aaccgatttt ctccaacatt
    60361 gctcgggcaa ccaccacatt catttcaatg tcttctacca atagcacctt aagggaatgt
    60421 tgctgaatag caaatatcgg cttggtttcc gtgctttctg cctgcacagt gagggtaaaa
    60481 gttgagcctt gattttcttg gcttgccacc accaaatcac cgcccattag cttcgcaatg
    60541 cgtttcgaga ccgataagcc aatcccgcta ccttgcgctt ttttctcttt agagttttcc
    60601 gcttggtaga acatatcaaa aattttgcgt tgatcttttt ccggaatacc gatgcctgaa
    60661 tccgtcaccg caaagctaaa ctgttcttta tctaattggt aaatttccag caaaattcga
    60721 ccgcttgcag gggtaaattt caccgcattg ctgatcaaat tccataaaat ttggctcaag
    60781 cgtgcgtggt cgatatagat atacttcggc aaatcaggcg gatacttcac ttcaaaatta
    60841 atctgcttat tgcccgccat aaaatgccca aaattagcaa tatcgtgaat gagttgttca
    60901 aattccacct cttttcttac caattcaatt cggctactat caattttttc taaatcaata
    60961 atatcgccaa aaatatgagc caatgcagtg gcactcatat tgatagtttt tagatattct
    61021 tgctgttttt cggtggtttt atcatctaac aaaatttggc tcaagccgat aattccatta
    61081 aggggagtac gaagttcgtg actaatggtc gccattaaaa tgcttttatc acggctgttt
    61141 ttttctaatt tagcgttaag ataggcatct tgttcccgga gttcttccaa atctcttact
    61201 gctttttcta atttcaagcg agatatttca agtttttcca ccaataacgt gaagaaataa
    61261 agcacaaaag gcgcagaaat taaaccaaaa gcgatggagc gtaaaatatc caccacgact
    61321 actcgcccaa taaaaagata ggttaagcta ctttgaatta aaattgccga aagagcgacc
    61381 ataaaaaagc ctaaaagaga agcttttaac cgccctagct ttaataccca attaatatat
    61441 ttttggctaa attttttaac ttgcatacga cctcaaaaca aaaagcagac catcagatct
    61501 gctttatttt actctatttt ttactttttg cctttgacta gctcatcagc ccataggaat
    61561 aattcattta catcataatc acctgaatgg ggtacattcc acggggtttc ataattaaca
    61621 tttttgcctg ccatttgcag ttttattgct aagattgcag aaattgccag cgaggtatct
    61681 ctatctgccg ttcccaccct aatccgccaa tgttccgcag catttgggtt atccaaatag
    61741 tgcatcgggt tcatccgttt cacgatttgc ggatcggcta aattgagatc tttattggca
    61801 gaacgttccg cactataaag cgtaaaatgg cggttatttt ccgtgtctgt gccaaataaa
    61861 ttattctcgc ccgaacttcc atttaacgca tcaaatgcag gtggtgattt catccgttta
    61921 tctgaaaaca cataaccaaa ccagtccaca ctgctgactt tgcctttctc aaatgaaagc
    61981 caactaattt gttgaaaggc tttttgctct tcgctatctt gaactaaacc tctataggct
    62041 ttatttgcag ccgtttttac cacttcagat aaataatctt taaacgagcc gttgcctttt
    62101 ggatcaagtg ttaaaggatt gcctttctca tcaaccaaat gcaaactgtt caaataagtc
    62161 ggaaagcgtt ctgctaattc attagaaact ttaatttccg cctcatttaa cgagccttca
    62221 attttcggct ttggttttgg ttttgagcgg tcgttaaact ctgctgcatt taatcgactc
    62281 atatcgattc ggctatattc attgacacca ttaaattgcc attcatacgc catatccgca
    62341 ttttcaaggt tggtaattgg gcaataggca gaaactgcaa aaattttgtc actggcattc
    62401 aatgcccccg cctctttcaa ataaggctca tagtcgtaat gatcagctga agctcctaac
    62461 aaagtagata atgctcctcc ggcactggtg ccgttagaga taattttatt tgcatcgccc
    62521 ggcatttttt catcattagc atgcagatac cgcactgctg attttgaatc aactacgtag
    62581 aatcattcaa ataacattca caaatacata gttattatga tgtatccagc caatacatcc
    62641 actgggattt tccatccgaa tttcggacaa tcctgatctt acacattctt tcagatttgt
    62701 aaagtctgaa aatcattttt atgcttgatt ttacttgaaa gtatctatct tggtctgaca
    62761 ttattccgtc ttattacagc tctttgaaca taaaatcgac tcatgtttgt ttacattcta
    62821 aatatatttt ctgtttaaat cgcaaagagt ttatcaaaag atgaagtcga tcatctcatc
    62881 gcgtctgcct ggttcatttt tgcatgatca ttgatcattt atggacaaga tgatatttat
    62941 aactgtcaat atagttaaaa aaataaagcc ataacaaact taaaaacgtc tattatggct
    63001 ataatatcaa atagaattct cctgcttaaa tacctttgag acttagatat ctaaaaaaca
    63061 ctcatcacaa aaaggattta gtacaatttc caatctaact atcatgtatt ccacatacat
    63121 tataactata aaactctctc aaggtgaaag ctagaaattt attttttaat cttcaataag
    63181 aatgttatta taaaaattag catacacaat attccatata taaaaattat tttactaaaa
    63241 ttcagataat tagataacaa tcctattata ccaaaagaga gcaacatagt aaaagaacat
    63301 aatgtgttaa cagtagacag tatagtacct ctttcattag aagaaataga atggtttaat
    63361 aaaacaccta aagaagtatc aataatttca taacatatca aaattacaat aaaagctaat
    63421 actatccata tgcctccaaa tataaaagaa gcacacaaag aaaat
//
LOCUS       DANMCL010000003        61275 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.003, whole genome shotgun sequence.
ACCESSION   DANMCL010000003 DANMCL010000000
VERSION     DANMCL010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 61275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 61275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..61275
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.003"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(41..115)
                     /locus_tag="PXF40_000140"
     tRNA            complement(41..115)
                     /locus_tag="PXF40_000140"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(81..83),aa:Gln,seq:ttg)
     gene            complement(141..225)
                     /locus_tag="PXF40_000141"
     tRNA            complement(141..225)
                     /locus_tag="PXF40_000141"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(189..191),aa:Leu,seq:tag)
     gene            complement(228..304)
                     /locus_tag="PXF40_000142"
     tRNA            complement(228..304)
                     /locus_tag="PXF40_000142"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(268..270),aa:Met,seq:cat)
     gene            complement(471..1295)
                     /gene="aroE"
                     /locus_tag="PXF40_000143"
     CDS             complement(471..1295)
                     /gene="aroE"
                     /locus_tag="PXF40_000143"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HDL5801526.1"
                     /translation="MNRYAVWGNPIAQSKSPRIHQLFALQTQRNIEYIANLGDETAFE
                     QQLADFFASGAKGCNITAPFKERAFKLADEFSETALLAQACNTLKRLEDGRLYADNTD
                     GAGLVSDLERLGWLQKGHKTLILGAGGATKGVLLPLLKAGLEITLYNRTQEKAVVLAE
                     KFAKFGKIQTACLSDLANQLFNLIVNATSLGLQGKYVELPESVIASANIYDMQYAPNM
                     QTPFLNYARRCGATACQDGLGMLVGQAAFAFSLWEGQFPDVEPVLAQLKLEMQTVK"
     gene            complement(1302..1856)
                     /locus_tag="PXF40_000144"
     CDS             complement(1302..1856)
                     /locus_tag="PXF40_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HDL5801527.1"
                     /translation="MNNFLEIVNQLKQEEVVAYPTEAVFGLGCNPQSEKAVRKLLVLK
                     QRPEEKGLILLASDLKYLLPYIDEARMTEQAWQRLSHIGEQAITWIVPVKNTVPSYLT
                     GKFDSIAVRLCNVPAVVQLCEASGVALTSTSANLSGEPPCRNAKEVIDQFGQDFPVLH
                     ADTLGRENPSEIRDIFSQQIFRQG"
     gene            complement(1849..2385)
                     /locus_tag="PXF40_000145"
     CDS             complement(1849..2385)
                     /locus_tag="PXF40_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase DNA-binding C4 zinc finger
                     domain-containing protein"
                     /protein_id="HDL5801528.1"
                     /translation="MVLFKSTKQTETCPQCGSPLQIKQGKKGLFLGCSAYPECDYIKP
                     LHQAGHIIKQLDELCPECGGNLQLKQGNYGIFIGCSHYPECHFIVHEEAEVEEEFDCP
                     ECKQHKLIARKGRSGKIFYGCIGFPNCKFTLATRPINHLCEKCGCELATIKKIKGKQF
                     TICANKSCQHQTELKPNE"
     gene            complement(2395..2706)
                     /locus_tag="PXF40_000146"
     CDS             complement(2395..2706)
                     /locus_tag="PXF40_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HDL5801529.1"
                     /translation="MNREKITFFSRFEADILSGKKTITIRDKSESYFQPNQELAVFTN
                     ETDRFFANIKVLSVTPIVFDELNEQHAKQENMSLAELKQVIREIYPNDNAFFVIEFTL
                     I"
     gene            complement(2699..3175)
                     /gene="recX"
                     /locus_tag="PXF40_000147"
     CDS             complement(2699..3175)
                     /gene="recX"
                     /locus_tag="PXF40_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HDL5801530.1"
                     /translation="MTTSTTKTNKYTAVNYLLYLLSKRDYSEQELRQKLKQKEYELTE
                     IDAAIEKAQANQWQSDERFCTTFIRYRSMQGIGPRRLKQELKLKGVKDWLINQELENA
                     EVDWFELAEQIFEKKRPLVWDLKAKQKMWRFMVSRGFYNDHFSHLMALDYSSDEYE"
     gene            complement(3234..4340)
                     /gene="recA"
                     /locus_tag="PXF40_000148"
     CDS             complement(3234..4340)
                     /gene="recA"
                     /locus_tag="PXF40_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HDL5801531.1"
                     /translation="MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLG
                     DTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGK
                     TCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSV
                     AALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFG
                     NPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDI
                     MYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAIKWLKEHPEVASKIE
                     QDIRNLLISNPTFTATPDSENADNADDEFSEEEL"
     gene            complement(4441..5061)
                     /locus_tag="PXF40_000149"
     CDS             complement(4441..5061)
                     /locus_tag="PXF40_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HDL5801532.1"
                     /translation="MCRFPLFETLSIIDGKVQNLQYHQQRFEQATQEYFGCEPRFSLA
                     DILVVPEASQRGKVRCRIDYNATEFELKFFIYSPKKVERFRLVEVENWDYHLKFSDRK
                     RFDLLPILQNEEVIILNNGYVSDCSIGNLLFLKQGIWYSPQHYLLKGTQLSKLLDEGK
                     VVLAKIAKQDLHQYEKIMLINALNPFEEPRALPCSQIYFCDLDRKS"
     gene            complement(5039..6013)
                     /locus_tag="PXF40_000150"
     CDS             complement(5039..6013)
                     /locus_tag="PXF40_000150"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HDL5801533.1"
                     /translation="MQDFIHQANHYGQAKRPFFFLIDFEQQKPLIFPLEQAHASGLFF
                     EFFCKSNLEKPVEKPTKAFELSANPIPFSEYQTGFELVKKEIQAGNSYLLNLSYPTAI
                     ETNYSLAEIFAASKAKYKCYLQGRFVCFSPECFVRIENNRIFSYPMKGTINANEENAE
                     QKLMASEKEFTEHNTIVDLIRNDLALVAKNIEVTKYRYVEKVETHRGAILQTSSEICG
                     ELGENWQENIGSILAKLLPAGSISGAPKEKTVSIIQQAELGKRGYYTGIFGYFDGESL
                     ESAVAIRYIAQTSNGLVFHSGGGITSQSVLTDEYNELLEKVYVPISAI"
     gene            6123..7730
                     /gene="rmuC"
                     /locus_tag="PXF40_000151"
     CDS             6123..7730
                     /gene="rmuC"
                     /locus_tag="PXF40_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HDL5801534.1"
                     /translation="MHFQEIGIYIALAVCVLVGVYLFFLKSRYQRNAYELSQDLGKIT
                     ENFEQIQQKYEVLAQEKNQLEQWAIQQQTKYEAVSERLNERDGQLQRFQQKIELAEQQ
                     ENQLERYINELKERVGSSQAKAESLEEQLQFSQSSLSTKERENQALFSRLNEVQNELT
                     ELRTTLSEKQANFEAQQRNFIEVKQQLNVEFQHLAQQILDEKSKRFSETNQSSLEALL
                     KPFKEQIEGFQKRVNEVHSESLKGSANLEAEIKRVLQIGVSMSEEAQNLATALKGNNK
                     IAGNWGEVQLESALQSAGLLAGEHYQAQESFRDEEGRRFAPDFVVHLPDQKHLIIDSK
                     VSLVAYDQAVRSEENFAISQALDEHCRSLRNHIEGLSKKNYSALLGIKSPDFVLMFIP
                     IEPAYIEAMKHDPQLFNFGYERNVILVSHTTLMPILRTVANLWRIERGNSEAREISEK
                     AGEIYNQVCAVADRLAKLGNTLNTANNQYNQTVTSLVGRQGLLGKVERFQHLSSKASQ
                     IVPQVELIENEVDTIKLEMVSRELLEE"
     gene            7793..8377
                     /locus_tag="PXF40_000152"
     CDS             7793..8377
                     /locus_tag="PXF40_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component II"
                     /protein_id="HDL5801535.1"
                     /translation="MLKKLLIIDNHDSFTFNLVDLLRKLDVPAKVVLVEELDLNEVEH
                     FSHILISPGPDVPRAYLQTFAMLERYHQTKSILGVCLGHQTICEFFGGKLYNLNDVRH
                     GQQRTLTQIEPNPIFKGLPKQLKVGLYHSWGILQNSLQNTPLVPTAVCDQNVLMAFKH
                     QHLPIFGVQFHPESFITEFGQQMLANWLEITQDF"
     gene            8474..9556
                     /gene="prfA"
                     /locus_tag="PXF40_000153"
     CDS             8474..9556
                     /gene="prfA"
                     /locus_tag="PXF40_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HDL5801536.1"
                     /translation="MKDSIINKLESLSERHEELQALLGDASIISDQDKFRAYSKEYSQ
                     LEEVVGTFNRWKKLNNDIEEAQLLLDDPDMKDMAAEEIAENKAEIENLEQHLQILLLP
                     KDPNDEYNAFLEIRAGTGGDEAGIFAGDLYRMYSRYCESKRWRIEEMSANESEQGGYK
                     EIIVKISGEGVYGQLKFESGGHRVQRVPKTESQGRIHTSACTVAVMPELPESEMPEIN
                     PSDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVECQDERSQHKNKAKALAVLAS
                     RIVQVEQERQAAEQADTRRNLLGSGDRSDKIRTYNYPQGRVTDHRINLTVYRLDEVMN
                     GKIDELIQPIITEYQADQLAALSEQN"
     gene            9668..10270
                     /locus_tag="PXF40_000154"
     CDS             9668..10270
                     /locus_tag="PXF40_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801537.1"
                     /translation="MRKLGLLAVFTLVLSACSNSTKIEQTILSKQDIVGSWVCAIKYD
                     DLKVSTLDFSEFKANGEMTNFGDISDENFEPIKFTYVTGDKGKWDLKGNRLVIDYDLS
                     ERKVKRTTPKKFLEFLKQEERKASKTAKKLLKYEQGIFNILSDQKNTENSKIILDILK
                     FGHSRMAIQQNMGDKVYSGGCVTADKAEEYLDILKNRNSK"
     gene            10270..11136
                     /gene="prmC"
                     /locus_tag="PXF40_000155"
     CDS             10270..11136
                     /gene="prmC"
                     /locus_tag="PXF40_000155"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5801538.1"
                     /translation="MDYREWLTFAEQKLLENSGADPYLNAKFDANLLLQAVTKRSKSA
                     IFAFSETLLSESELAELAEKLARRAKGEPMAYILGYREFWSLPLKVSPATLIPRPDTE
                     RLVELALEYANKRLGNQKMLQILDLGTGTGAIALALASELGEKAQIIGVDFQNEAVQL
                     AEENRRNLGLNQVTFLQSDWFSSLANQQFDLIVSNPPYIDESDENLTVGDVRFEPLTA
                     LVADNKGLSDLQKIIENAPLHLKPQGALMLEHGWKQGNLVRDLFDLHLWEQVETAQDY
                     AGNDRVTKAILK"
     gene            11145..12011
                     /locus_tag="PXF40_000156"
     CDS             11145..12011
                     /locus_tag="PXF40_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB1 family protein"
                     /protein_id="HDL5801539.1"
                     /translation="MDDIIEELLKELEDPKVTISETELKKFLYREILRLTTLIDKNVS
                     EQQVFGQMSALVKKARYNVNGEGDEERINQLLHLVYREWGFHCYYEDYFHTENLLLNQ
                     VIRKRRGMPVSLGAVALYLSAVLDLPLYPVNFPTQLVLRAEIHQPNGATKVRFINPWN
                     GEFLTIEMLNKWLEGEMGFGVEVTPDLLRRAEPQELLERVETVFKMALTREGKYEETL
                     RLIEYRLAFSPEDPYEIRDRGMVLASMDCYQAALEDINYFIDQCPEDPSAEILKMEVK
                     GLQQKSQESVVH"
     gene            12101..12955
                     /gene="kdsA"
                     /locus_tag="PXF40_000157"
     CDS             12101..12955
                     /gene="kdsA"
                     /locus_tag="PXF40_000157"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HDL5801540.1"
                     /translation="MTDKIVKVGNIEVANHKPFTLFGGMNVLESRDMALRVCEQYVEV
                     TQKLNVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKQTFGVNIITDVHEIYQC
                     KPVAEVVDVIQLPAFLARQTDLVEAMARTGAVINVKKPQFLSPGQMGNIVEKIAECGN
                     DQVILCDRGTNFGYDNLVVDMLGFGIMKKVSKGCPVIFDVTHSLQCRDPFGAASGGRR
                     DQVTELARSGMAIGLAGLFLEAHPDPNSAKCDGPSALPLSKLEAFVSQMKAIDELVKS
                     FEEIDTSK"
     gene            13176..14123
                     /locus_tag="PXF40_000158"
     CDS             13176..14123
                     /locus_tag="PXF40_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HDL5801541.1"
                     /translation="MLNIVFLDRTGIPATHDIPRPNFPHTWTEYATTSADQTFERVKE
                     ADIIITSKVLLQRDLLAKLPKLKLIAITATGTNNVDLAAAKELGIAVKNVTGYSSVTV
                     PEHVIGMIYSLKHRLADYHRDLITSDRWATCGQFCYVDYPIHDVRGSTLGIFGKGNIG
                     AEVARLAQAVGMQVIFAEHQGATEIREGYTAFEEVFKQADIISLHCPLTEQTQNLINA
                     ETLALMKPTAYIINTGRGPLIDEQALLEALEQGKIAGAALDVLVKEPPEKDNPLMLAA
                     KRLPNLLITPHVAWASDSAVTTLVNKVTQNMEEFVATGM"
     gene            14221..15393
                     /locus_tag="PXF40_000159"
     CDS             14221..15393
                     /locus_tag="PXF40_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HDL5801542.1"
                     /translation="MNLTPFFIAFRYFRSKSADRFGRLVTNLASLGIVLGVMALVIVL
                     SVMNGLENMQKTNLLSTLPHAIITPQEGHFAKGEKLALPEFAKQSVVINRANVIIQSS
                     QGINAGQLIGVENATDDPLLVAENIPALLPSGEFKVVIGSRLANKLNVTVGDKLRLMI
                     TENSQYTPLGRVPVQRLFEISGVYQSNREASEFTLFANLADVGRLLRISEDQVQGVRL
                     YLQDPFQVTELSQYFDAERYQISDWREQKGEFFQAVKMEKNMMGLLISLIIVVAISNI
                     VTSLSLMVVDKQGEIAILQTQGLTKKQVMQIFVFQGAIVGVIGSIIGGLLGVLIAYNL
                     DQIILLLNPSIHLPTLISGTQIAVIVGVSMLLSLLCTLYPAYRASKIEPAQALRYE"
     gene            15410..16093
                     /gene="lolD"
                     /locus_tag="PXF40_000160"
     CDS             15410..16093
                     /gene="lolD"
                     /locus_tag="PXF40_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HDL5801543.1"
                     /translation="MTELLRCEHISKFYDEGEQKVQVLKEVSFSMNEGELVAIVGSSG
                     SGKSTLLHTLGGLDQPSTGEVWIRGQSLQQLSSDKLALLRNQNLGFVYQFHHLMADFT
                     ALENVMMPMLIGKQNKTEAANRAEKMLQAVGLAHRMTHRPSALSGGERQRVAIARALV
                     NNPALVLADEPTGNLDQKTTESIFELIQQLNQEQNIAFLLVTHDLNLANKLSRSLVMR
                     DGVLSEGSL"
     gene            16090..17355
                     /gene="lolE"
                     /locus_tag="PXF40_000161"
     CDS             16090..17355
                     /gene="lolE"
                     /locus_tag="PXF40_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HDL5801544.1"
                     /translation="MSTPFFISWRYQRGKQKNKLVSLIALFSNIGIALGVAVLIIGLS
                     AMNGFERELNNRVLSVVPHAELVSFQGNQPQPIFDSKKLEALIKKSQNVTASSPFVSF
                     TALIENGAQLKIAQVRGVDPKKQDQASQLSQFIPPEQWQAFNQQFQADEDGLILGAGI
                     AKALEVEAGDEVTLLIPQPTEDGKLAQPLRFNLNVTGILRLDGQLDHSYALIPLNKAQ
                     ELMEYQANEVSGLEISLANPFDVQQLEMPQLNGYTQPLYLNTWIDKFGYMYNDIQLIR
                     TVMYIAMVLVIGVACFNIISTLIMAVKDKQGDIAILRTLGANNGFIRRIFLWYGLISG
                     MKGALFGLILGVILSLNLTAIIKAIEAFFEVKLLSDGVYFVDFLPSELHWQDVVYVLA
                     ATIILSLFASLYPANRAAKLEPAKVLSGH"
     gene            complement(17430..19361)
                     /gene="thrS"
                     /locus_tag="PXF40_000162"
     CDS             complement(17430..19361)
                     /gene="thrS"
                     /locus_tag="PXF40_000162"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HDL5801545.1"
                     /translation="MPIITLPDGSQRSFDNPVSVMEVAQSIGAGLAKATIAGRVNGER
                     RDASDIISQDSTLEIITAKDEDGLEIIRHSTAHLLGHSIKQLFPDVKMAIGPTIENGF
                     YYDIDLDRSLTQEDLDALEKRMLELAKTNYDVVKRPVSWQEARDTFEKRGEPYKMAIL
                     DENIERTATPALYHHEEYIDMCRGPHVPNMRFCHHFKLQKVAGAYWRGDSKNKMLQRI
                     YGTAWADKKQLAEYLQRLEEAAKRDHRRIGKALDLYHMQEEAPGMVFWHNDGWTIFRE
                     LETFVRTKLKEYDYQEVKGPFMMDRVLWEKTGHWQNYADLMFTTQSENREYAIKPMNC
                     PGHVQIFNQGLKSYRDLPIRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IESEVISCIKMVYDIYSTFGFTNIAVKLSTRPENRIGDDAMWDRAEKGLANALRNNGL
                     EYEIQEGEGAFYGPKIEFALRDCLGREWQCGTVQLDFALPGRLAASYVAEDNGRRTPV
                     MIHRAILGSIERFIGIITEEYAGFFPTWLAPTQAVVMNITDSQADYVQQVVKQLSDAG
                     IRVKADLRNEKVGFKVREHTLRRVPYMLVCGDKEIAEGKVSVRTRKGADLGTYLVSDL
                     VEILKNQIKARELKLLGEE"
     gene            complement(19528..20877)
                     /locus_tag="PXF40_000163"
     CDS             complement(19528..20877)
                     /locus_tag="PXF40_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5801546.1"
                     /translation="MNSTKFYSLYSGIFFLFFGYGLFLNSAGIKLAEMGITDIIIGLL
                     NAAFFIGAALSTIFAHRIVSSVGHIRSFSVFCAVFAIAALGHIMIDTLWIWGVLRIIL
                     GFCHYSLLLLVESWLSEKTNVDTRGKVLATYNIIFYLAFILGVSLLSLELSSRNIFIL
                     STILVVMSMIPIALTKMVQPDIPARERISIPKLFAISPLALATSFISGMLVNGFFTMA
                     SVFLLKFSFSLSEISLYLIISMIGGFISQMPMAILSNRIGRRNAILACSVIATLTALA
                     GLFAIFQENLTAWGQYIIAFFFGCSLFSLYALSIARANDELPNNMNTVEVSRGLLFCY
                     GVGALVAPPLIGFAMSLSAEYGFYALFGLFSLSLFICAFRTKSIPKAERAEMQYATPI
                     ATASPLEEIEVVEDALIPFDEEAVQEYQAQLEILEQDPQTENENIELDEGAAENSKV"
     gene            complement(21152..21643)
                     /locus_tag="PXF40_000164"
     CDS             complement(21152..21643)
                     /locus_tag="PXF40_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HDL5801547.1"
                     /translation="MFTTQLIQTKRWLEANSITTFWLKTFIGATLLAIFAQISVPMYP
                     VPITGQTLALTVVGFAMGRKAATAAVLLYLFEGAIGLPVFAGGASGFHHFFGPTGGYL
                     LGYIPTAYFLGYYSDKGVLNSFWKSLFVALIASVITFAFGLAQLSLYQKAQYYKRAYI
                     HLF"
     gene            21724..22491
                     /locus_tag="PXF40_000165"
     CDS             21724..22491
                     /locus_tag="PXF40_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--protein ligase"
                     /protein_id="HDL5801548.1"
                     /translation="MVKPVYIYCDEGSSEIGVQSLLLAVKQHLQRPAYLINAKQIIQS
                     KFSDGCLLIMPGGADLPYCKKLNGEGNRRIRQFIEQGGAYLGICAGAYYGCAELNFVG
                     RDYSVNGNRELALFNGIAGIAKGSLPQFTNGQLYDKNIGSKAIVEVTLAEGGKMPFYY
                     HGGCCFEPNSTTVIYNPLAYYPDGSVAMIEGELGRGYYLLSGVHFELQAVVYWQKIVN
                     CCENLDIKTQEEAICSNFNVNYGSQIWQHLKQRLNQA"
     gene            complement(22482..23276)
                     /locus_tag="PXF40_000166"
     CDS             complement(22482..23276)
                     /locus_tag="PXF40_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HDL5801549.1"
                     /translation="MRFFDTHTHLDYLAESLNLSIPELVENAKQHQVECILIVAVFAK
                     NFAKVTACAKQKPENLVYGLGLHPLYIQQHQQQDLILLENLLSQQDPQCTAIAEIGLE
                     KAVSEVSTPELWKKQCEFLEAQLSLAKKFNLPVNLHSRKSHDQLFVFLKKAQLTKTGV
                     VHGFAGSYEQAKRFVDLGYKIGVGGTITYERANKTREAIRKLPLESLLLETDSPDMPV
                     FGFQGQPNRPERLLVTFNSLCELRTESPNLIAETIWQNSERLFFYA"
     gene            complement(23337..24923)
                     /locus_tag="PXF40_000167"
     CDS             complement(23337..24923)
                     /locus_tag="PXF40_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005667512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HDL5801550.1"
                     /translation="MLWFFFCVAVLVLGYFTYGKIIEKIFVINPKRATPAYAMNDGVD
                     YMPMSKTKIWLIQLLNIAGTGPIFGPILGALYGPVAMLWIVIGCIFAGAVHDYFCGML
                     SIRNGGATMPNLAGKFLGRPVKLFINVMALILLLLVGVVFVASPAQLLSTITMDIAGA
                     TQSAMELGDVEAIKESVASGGVTVWGMDKATVISVWTLIIFAYYILATLLPVDKIIGR
                     IYPFFGALLLFMSVGMVYGLVSAHLSATDPIDFFRTVNADGQGLTWEKFTQNFQVKGD
                     VPIWPLLFLTISCGALSGFHATQTPLMARCAQNEKEGRFIFYGAMITEGVIALVWCAV
                     GLSFYENPQALQDAISAGSPSKVVYDSSLHFLGFIGGIFAVLGVVVLPITSGDTAFRA
                     ARLQLAEIFGLEQRTLVKRLYIAVPLFVLGFIVSKVDFSVLWRYFTWANQMTAMVMLW
                     TAAGYLYRYKKFHWVCSIPAWFITTVCATYLANNKIGFGLDYELSVYIGFAITVVCVI
                     CFFAFLKPSEARDEDAYVTN"
     gene            complement(25109..26962)
                     /gene="dxs"
                     /locus_tag="PXF40_000168"
     CDS             complement(25109..26962)
                     /gene="dxs"
                     /locus_tag="PXF40_000168"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HDL5801551.1"
                     /translation="MEKKYPLLSEINSPEDLRLLSKDQLQTVVDELRAYLLESVSQTS
                     GHLASGLGVVELTVALHYVYQTPFDQLIWDVGHQAYPHKILTGRRDQMHTIRQKDGIH
                     PFPWREESPYDVLSVGHSSTSISAGLGIAVAAEKENAGRKTVCVIGDGAITAGMAFEA
                     LNHAGALHTDMLVILNDNEMSISENVGALNNHLARIFSGSLYTSVRDGSKKILDKVPT
                     IKNFMKKSEEHMKGVIFSPESTLFEELGFNYIGPIDGHNIDELVKTLSNMRELKGPQF
                     LHIRTKKGKGYTPAENDPIGYHGVPKFDPTAAELPKSKAAPTYSNIFGDWLCEMAERD
                     PKIIGITPAMREGSGMVEFSKRFPEQYFDVAIAEQHAVTFGAGLAIAGYKPVVAIYSS
                     FLQRAYDQLIHDVAIQNLPVIFAIDRAGIVGADGQTHQGAFDLSFMRCIPNMTIMAPS
                     DENEMRKMLYTAYTMNTPSAIRYPRGNAKGVKLEPMQRLEVGKGNIIREGKKVAILNF
                     GALLDEAKIVAEKHNYTLVDMRFIKPLDEALLQKVADSHELLVTLEENAIQGGAGSFV
                     NEYLQNIGKIKPLVMLGIPDFFVPQSTQAEAYADLGLDAQGIEAKIQKFDI"
     gene            complement(27007..27819)
                     /gene="suhB"
                     /locus_tag="PXF40_000169"
     CDS             complement(27007..27819)
                     /gene="suhB"
                     /locus_tag="PXF40_000169"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HDL5801552.1"
                     /translation="MNPMLNIAIRAARKAGNIIAKGYEQSPQDTQVLQKNTNDYVTEI
                     DKAAEAAIIDVIRKSYPEHSIVTEESGVLNGSNENVQWVIDPLDGTTNFVKRLPHFAV
                     SIAVRENGRTTVGVVYDPIRNELFTAVRGEGAKLNEFRLRIDAERRDLKGTVIATGFP
                     FKVIRHRDAHLNMLEGLMNNGVADFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAA
                     GELIAREAGAIVTNFVGGTDYLKTGNLVVGNGRVVKEILNSIQPTLTEELKA"
     gene            28000..29034
                     /locus_tag="PXF40_000170"
     CDS             28000..29034
                     /locus_tag="PXF40_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA methyltransferase"
                     /protein_id="HDL5801553.1"
                     /translation="MQFKENNQPRFKHREERRSDECSPRFSDKGKMRGNEGKSDRPHK
                     LHFKRDEAYSRSEQIYPAEGKKASGEGSVQIWVKGGNSSVKEKKNGPLSPRAPEKIKK
                     NRLEEMKVYGENACISLFQQRPESIVRLWATVEGAKKLGDLMSYLAQHKKAYHVIDRE
                     EMERVTGTEHHGDMCLLVKKTASFVLEGYLQVPKKQDCLVLLDGVNNAQNVGGIIRTC
                     AFYGVKGIITENVDSLNSSAAARVAEGGLEFVRALETKNKHIALVQLRQAGYQIVHLT
                     RHKQAPSLTKIKLAEKVVFVLSEIPASDVAYAEDTTIQLSFNNPLNSGLNVAVNAGIL
                     LNQWYQTHIL"
     gene            29044..29928
                     /locus_tag="PXF40_000171"
     CDS             29044..29928
                     /locus_tag="PXF40_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HDL5801554.1"
                     /translation="MNQQKPFEVIAIVGTPRHDSAFETHLAVYNWLKDRDYQILVETE
                     VATQLQLKESYSLDQIGQRAELVIVIGGDGNMLGIARALAKYRVPLIGINRGNLGFLT
                     DIAPQTAFEQLYSCLVKNEYVIEERFLLEAFIERNGKIIAANNALNEIVVHPTQVARI
                     IEFEVYIDGKFAFSQRADGLIVATPTGSTAYSLSAGGPILTPNMNAMALVPMHPHTLS
                     SRPLVVDGDSQISLRFAKYNTPDLEVICDGQVNMHFTPEDRVLVRKSPDKLQLLHLKD
                     YSYFTVLGSKLGWASKLF"
     gene            30067..31044
                     /locus_tag="PXF40_000172"
     CDS             30067..31044
                     /locus_tag="PXF40_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1852 domain-containing protein"
                     /protein_id="HDL5801555.1"
                     /translation="MTTNFKCQVHTIEFNEDYQPEQSTRLTTNFANLARGENRKQNLQ
                     NAIAMINNRFNDLANWDNPNADRYSVKLDIVSLDIDVEGKGEFFPAIEWLKTYVIDYK
                     TGKTIDGIIGNNFSSFVRDYDFSVLLLDHNKDKPQFSVPEGYGELHGKLFKHLLASPE
                     YTAKYKKPPVICLSVATTRTYTRTTNVHPILGVEYLQDSYSLTDAYFAKMGLKVRYFM
                     PPKSVAPYAFYFDENADLLNDYTNLELISTIATMEAFQKIYRPEIYNANSVAGQVYKG
                     SLTYQDYSVTKVEYDREERTQLAIKQGKYTEEHFIKRYQAILEAWATEE"
     gene            31132..32163
                     /locus_tag="PXF40_000173"
     CDS             31132..32163
                     /locus_tag="PXF40_000173"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5801556.1"
                     /translation="MSNILLPTSTAGSLPKPSWLAEPEKLWSPWKFEGEELLQAKRDA
                     LLVSLAEQIAAGIDIVSDGEQTRQHFVTTFIEHLEGVDFSKREIVRIRNRYDASVPSV
                     VGAVSRPKSVFVDDAKFLRAHTDKPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKI
                     LNEEAKELEAAGVDIIQFDEPAFNVFFDELNDWGVAALERAAEGLKCETAVHICYGYG
                     IKANTDWKQTLGNEWRQYEESFPKLQQSKIDIISLECQNSRVPMDLIELVRGKKVMLG
                     AIDVATNIIETPEQVADTLRKALQFVDADKLYPSTNCGMAPLSRQVAQGKLQALSQGA
                     AILRAEFAK"
     gene            32251..32472
                     /locus_tag="PXF40_000174"
     CDS             32251..32472
                     /locus_tag="PXF40_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801557.1"
                     /translation="MLNLFKKPIKKSSFEAWAKLMDDVAKVAILAIPVILYGEYSLLM
                     KFTHSITLFAVVYFLLATARLFRETAEEM"
     gene            32748..34010
                     /locus_tag="PXF40_000175"
     CDS             32748..34010
                     /locus_tag="PXF40_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000919159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HDL5801558.1"
                     /translation="MLKRDMNIADYDAVLWQAIQDEDRRQEEHIELIASENYASPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQAN
                     AAVYMALLNPGDTILGMSLAHGGHLTHGASVSFSGKIYKAEQYGITDEGLIDYEALRK
                     QAQEVKPKMIVAGFSAYSQVMDWAKMREIADEVGAYLFVDMAHVAGLIAAGVYPNPLP
                     HAHVVTTTTHKTLAGPRGGLILSASGDEEMYKKLQSAVFPAGQGGPLMHVIAAKAVCF
                     KEALEPEFKAYQQQVVKNAKAMVEVFKQRGFDVVSNGTENHLFLVSFVKQGLTGKAAD
                     AALGAANITVNKNSVPNDPQKPFVTSGIRVGTPSVTRRGFKEAEVTALAGWMCDVLDS
                     IGKDNHEQVIAETKAKVLDICKRLPVYA"
     gene            34168..35004
                     /locus_tag="PXF40_000176"
     CDS             34168..35004
                     /locus_tag="PXF40_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ChaN family lipoprotein"
                     /protein_id="HDL5801559.1"
                     /translation="MLPRISSFLASLFMAFFLLGCSVSTQSLNEQNVDSIGQIIDLNT
                     NQTISFTELLSRLSSQDYVLVGEEHTQLIHHQIELYLFNQLTKKAKLHLIALEMLNVD
                     QQPAIDRIQFNRPVNLSATDLREAIQWQKWDWKMYQDLVVESLGSNSRVIATNLTDKE
                     VEILLNGAEPLKGSVSTSSEVKQKIAQLLLSMNHGMPYPMENMVAVQQFRDRRMAEKL
                     VKNALSTSLLIAGNHHVRKDLGVPLHIAEYDRTKKVAVLMLKTEREEITSSQADYLWV
                     TQ"
     gene            35058..37215
                     /locus_tag="PXF40_000177"
                     /pseudo
     CDS             35058..37215
                     /locus_tag="PXF40_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484758.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            37322..37960
                     /gene="purN"
                     /locus_tag="PXF40_000178"
     CDS             37322..37960
                     /gene="purN"
                     /locus_tag="PXF40_000178"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HDL5801560.1"
                     /translation="MKKFVVLISGNGSNLQAMIDAQKSADTSGQICGVICNKADAYGL
                     IRAKQAGIPTFVFSRKDYQSNVEMDLAIAEQIEQLGAELIVLAGYMKILTPEFTQHFA
                     GKILNIHPSLLPKYPGLNTYQRAIEAGESEHGTTIHFVNEEVDAGAVVLQAKVPIYPE
                     DEIEDVMARVVEQEHRYYPLVIEWFCSGRLVSQHGKAYLDGKLLPACGYAED"
     gene            complement(37981..38787)
                     /locus_tag="PXF40_000179"
     CDS             complement(37981..38787)
                     /locus_tag="PXF40_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5801561.1"
                     /translation="MSNLLTCQNLSIVHQQKKLLEIQEIAFEQGKFTAIIGPNGAGKT
                     TLLKALSGNNAQTNSAVFYQHQRLTDLNGYALAQKRAMLSQQSQIAFPLKVEELVQLG
                     REPYRQSEFAKFNEKITAWAMETMSLTALKERSSIQLSGGEQHRAHIARVLAQLVPEP
                     NADLSGSWLLLDEPTNHLDIHHQYQLFSLLQKLKQQGLTIIAILHDPALAINQADHIL
                     MLKNGEKFAEMSAKAIAESCLLDELYEMKMGCRYCPHSGQYYLCPALAES"
     gene            complement(38787..39773)
                     /locus_tag="PXF40_000180"
     CDS             complement(38787..39773)
                     /locus_tag="PXF40_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5801562.1"
                     /translation="MKLHLTLIFTLIISLVICTHLGAMSLPLSAWHCNNAECESAAYI
                     LWQIRLPRLLGALFIGAALAISGATMQGLFRNPLVDPGIIGVSSGAALAAALYIVVIQ
                     PLLPESISYYALPIAAFLGGWLVTFMLYLLSQRNGQLHIAIMLLIGIALAAFSGALTG
                     ILIYVADDNQLRSLTFWSMGSLAGMNWQMVAMMAAVVFICSPLIWREHRALNALTLGE
                     EDAQYIGFDIAKVKRRLVFYVALLTGTSVACVGAIGFVGLVIPHLMRLLGGSNHRHLL
                     LNSLVCGAILLMIADTLARTLAAPAEIPIGIFTALFGAPFLAVMVWKSGKHI"
     gene            complement(39784..40650)
                     /locus_tag="PXF40_000181"
     CDS             complement(39784..40650)
                     /locus_tag="PXF40_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5801563.1"
                     /translation="MEYKMRTLLFSFIALSMCLNTTKAAEKIVSTAGYASEIVAALGK
                     ADKLVGVDTTSVKPQTIMEKKPKIGYRRQLSAEGILSLTPDLIILAPDAGPNAVIEQI
                     KASGIPLLHLGEKPSLAGIREDIQQIAKAIGAESEAKQLTETILADEKKLADIRSQHS
                     TDKEVLVLIDTASQGIFGLGKKSVGDHFLTLLNLNNSFNAEGNKPLANEALAASNADV
                     ILLASRNQAKESATISKLAESSPQYAQLTNTQAGKKGCVFAINILDALGFGPYTAQYA
                     HQILTTIQPCLK"
     gene            40757..42916
                     /locus_tag="PXF40_000182"
     CDS             40757..42916
                     /locus_tag="PXF40_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5801564.1"
                     /translation="MQIKQTVLAIAITPFISQLSLAQETKISSIELDTIEVNEQQENL
                     LKQQAVMSNEDLVRYSTDMGVPQTGRFGPQGFNIRGVEGNQVAVTVDGISQAASNNYA
                     TFSRYSYYNKSRPEIDTELMSDVTIEKGSSTKVGNGALGGSVNYKTKTVSDILMKGRQ
                     FGGMLKYTYNGQNKENIETAGIAADGQYADALVMYSHRQGHETQTTSKGPDIMGSGRG
                     LPNPYKNNQYSYLAKLGLKWNDENRLELKTSKQRSKNAGQELSYSTVTLRDFLDVQEI
                     ETYGVTYLYTPKNSILENIKVAVTKQDTEISGINDQITIARGTKTDNTKRAFNTKNVE
                     GSLGVTFKPVDLGNTEHKLSTELGYGVSDFSFDMQTYTAGITPTDQNMQSPAKTKSFH
                     ILMGDSILLTQNLSAHLNARLSSQKLHSDDNSLSDKTFNNWAGDIGLNYQLSPVWQIG
                     YKLSRGFRTPTASEMFFNREVQGRGASQTFLANTNLKPETSLGNEISLVGNGSLGSLS
                     VAAYHTHYRNLIDLATIGNNIYQSQNVNRAKIKGVDINGTLDLNTAWNAIPQGFELNG
                     GFGYARGKRNDGTDLLTVQPLKALFGIGYRAVNNDWAIHLNGTYTQGKKAKYAQQYAI
                     LANTGYLSYDKSLTTYPYLSNSATVFDLVAHKKFGERAIVKVGVYNLFNKKYWTWDSL
                     RTIGITSPGVANSITGEGLNRYLAPERYVMASVEFKF"
     gene            complement(43126..43521)
                     /locus_tag="PXF40_000183"
     CDS             complement(43126..43521)
                     /locus_tag="PXF40_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5801565.1"
                     /translation="MKKLMIFATTAMIVSNLAHAAGEQSDAREAHESTVKTSTVKYSC
                     QNGKKLSVKYGFNKQGIPTYAEAKLSGKKRFMPINLYTTDATGTNFGDENNFSLYGDP
                     MEFTNHRKASVNIQSPASEILYKGCTPQK"
     gene            complement(43701..45296)
                     /locus_tag="PXF40_000184"
     CDS             complement(43701..45296)
                     /locus_tag="PXF40_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5801566.1"
                     /translation="MELLAVNNLDVYLKTDEELVHAVRNVSFSIEKGQTLAIVGESGS
                     GKSVTSMAIMQLLPKNIVSFGERSSIIFEEQNLLTLSEKAMQTVRGDRIGMIFQEPMT
                     SLNPYMPIGKQVAETVQTHNPQISNAEAEKMVLETLQKVKIPDAEKKMICYPHEFSGG
                     QLQRIMIAMAIINKPDLLIADEPTTALDVTTQAEILDLMHDLQRDMGMAIILISHDLR
                     LVHKYSDLVCVMQNGEIIERGETETVFTNPQHPYTVELLTPIPTNLKGELPPNAPTLL
                     QGEHIKVDYILKRSLFGKPKKVFNALKDISLHLKTGETLGIVGESGSGKSTLGRAIMQ
                     ILDYRGNITFAGKTLANLNKAERQALKKDMQMVFQDPFNSLSPRLTVGEIIAEGLTVH
                     CPQMSKTERREKVMKMLEEVNLNPAMINRYPHEFSGGQRQRIAIARAIILEPKFVLLD
                     EPTSALDRSTQITVIELLNRLQKKYGLSYIFISHDLAVIKALSDRVIVMSQGEIVESG
                     DVTQIFENPQQEYTKRLILASNL"
     gene            complement(45306..46205)
                     /gene="oppC"
                     /locus_tag="PXF40_000185"
     CDS             complement(45306..46205)
                     /gene="oppC"
                     /locus_tag="PXF40_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HDL5801567.1"
                     /translation="MQNSSKNQPLVEVTSTIQGRSLWQDARRRFFRNKAAVASLIILC
                     CIILFITFAPMLMPFSYEDTDWNMMGIAPDFESQHYFGTDSSGRDLLVRVAIGGRISL
                     MVGIAGALIAVLIGTIYGAISGYFGGKVDMVMMRFLEILSSFPFMFFVILLVTFFGQN
                     IFLIFIAIGMVAWLNLARIVRGQTLSLKNKEFVEAAIVCGVSRRQIIWRHIVPNVLGL
                     VVVYASLEVPSLILFESFLSFLGLGTQEPMSSWGALLSDGAAQMETSPWLLAFPAFFL
                     CLTLFCFNFIGDGLRDALDPKDK"
     gene            complement(46220..47143)
                     /gene="oppB"
                     /locus_tag="PXF40_000186"
     CDS             complement(46220..47143)
                     /gene="oppB"
                     /locus_tag="PXF40_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HDL5801568.1"
                     /translation="MLKFIFKRLLEAIPTLLILITFSFFLMRLAPGSPFTSEKAYPPK
                     VMANIEAKYHLNEPLYKQYFLYMENLSKGDFGPSFKYKDQSVNNLIASAFPVSIKLGI
                     TAFIFAVLIGLTAGTIAALKQNSKWDYLVMGFSMTGIIMPSFVFAPLLVLMFAIYLKW
                     LPAGGWNGGQLYYMVLPVLSLTISYVAGIARITRGSMIEVLHSNFIRTAKAKGLPMRK
                     IIFKHALRPALLPVITYLGPAFVGIITGSMVIESVFGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGTLTILFNAIVDILYAVIDPKIRYS"
     gene            complement(47344..48111)
                     /gene="potC"
                     /locus_tag="PXF40_000187"
     CDS             complement(47344..48111)
                     /gene="potC"
                     /locus_tag="PXF40_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HDL5801569.1"
                     /translation="MKKMFRNLFMLVVFAYLYIPIIILVINSFNEDRFGLNWKGFTWN
                     WYERLFSNDTLVQATLNSLTIAFFAATFSTILGALTSIALYRYRFRGKKLVGGMLFVV
                     MMSPDIVMAVSMLVLFMILGIKLGFISLLIAHITFCLPYVVIAISSRLSDFDGKMLEA
                     AKDLGASEVTILRKIILPLALPSIISGWLLSFTISLDDVIVSSFVTSPSYEVLPLKIF
                     SLVKTGVTPEVNALATIMIIFSLTLVVLSQLVVKKKV"
     gene            complement(48111..48974)
                     /gene="potB"
                     /locus_tag="PXF40_000188"
     CDS             complement(48111..48974)
                     /gene="potB"
                     /locus_tag="PXF40_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HDL5801570.1"
                     /translation="MKANNKFQNGAVATIFGWLLLFVLVPNVLVLIISFLTENRQSQY
                     FVDFAFSFDAYKSLFNDTYAAVLWNSLYMAGIATFFCLIIGYPFAFFIAKMPERIRPF
                     LLFLVVLPFWTNSLIRIYGIKIFLGVKGFLNESLMALGIISEPMRLLNSEIAIIIGLV
                     YILLPFMILPLYSSIEKIDNRLLEAAKDLGANAFQRFIKVTIPLTMPGIVAGCLLVLL
                     PAMGMFYVADLLGGGKTPLVGNIIKSLFLNTNQFALGSAVSIALTILMALMLYVYYRA
                     NKLLNKKVELE"
     gene            complement(48961..50076)
                     /gene="potA"
                     /locus_tag="PXF40_000189"
     CDS             complement(48961..50076)
                     /gene="potA"
                     /locus_tag="PXF40_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HDL5801571.1"
                     /translation="MEKVEQKAIIELKNVTKSYGSKTILKNLNLTINDGEFLTILGPS
                     GCGKTTALRLIAGFEDLTEGSIILDGQDVSNVPAEQRPVNTVFQSYALFPHMTIFENV
                     AFGLRMQKVPNAEIEPRVMEALRMVRLEDRAQQKPAQLSGGQQQRIAIARAVVNKPKV
                     LLLDESLSALDYKLRKEMQNELKALQRQLGITFIFVTHDQEEALTMSDRIIVMNAGKI
                     AQDGTPREIYEEPSNLFVARFIGEINVFDATVIERVDATNVKANVEGRICNIKVEDLE
                     VQPNQKLKVLLRPEDIVIEELDENESSKAIIGHIIDRNYKGMTLESSVRLDHNGMNVL
                     VSEFFNEDDPNIDHEVGQKVALTWYEGWEVVLNDEGE"
     gene            50324..52342
                     /gene="rep"
                     /locus_tag="PXF40_000190"
     CDS             50324..52342
                     /gene="rep"
                     /locus_tag="PXF40_000190"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HDL5801572.1"
                     /translation="MKLNSQQQQAVEYTKGACLVLAGAGSGKTRVIINKIAHLIAHCG
                     YSPKQIAAVTFTNKAAREMRERVDHSIGKENSKGLTISTFHTLGFEILKREYKLLGFK
                     SGMTLFDEQDQIALLKHLLPENVTEDKDLLKALIATISNWKNDLLSPERVLTRVRDER
                     ERVFSHFYQLYQNQLKAYNALDFDDLIMLPVLLFRQFPEAKSRWQQKIRYLLVDEYQD
                     TNTSQYELIKLIVGNEPNFTVVGDDDQSIYSWRGAKPENMQRLREDFDLQVIKLEQNY
                     RSSQRILHCANILIDNNDHLFSKRLFSELGQGEKLQVIEAKNEEHEAERIVGELIAHR
                     FSKKTKYKDYAILYRGNHQSRLLEKLLMQNRIPYKISGGTSFFARAEIKDMMAYLRLV
                     VNQDDDAAFLRIVNTPKREIGAATLEKLGILANEKQVSLFEAIFDFELIQRLTPKPYQ
                     ALQDFARWIVEIADQADRSDPIEAVKDLLAKIQYEAYLYEMAANPKVAEMQSRNVQTL
                     FEWVQAMLEGDEIEPPMNLVQVVNRLTLRDMLERGEEDDEADQVQLMTLHASKGLEFP
                     HVFLIGMEEGILPHQTSLDEDNVEEERRLAYVGITRAQQTLTFSLCKERRQYGEIIKP
                     EPSRFLLELPQDDLEWESEKPRMTEQEKEAKSSANIANLMAMLKANKK"
     gene            complement(52417..53844)
                     /gene="aspA"
                     /locus_tag="PXF40_000191"
     CDS             complement(52417..53844)
                     /gene="aspA"
                     /locus_tag="PXF40_000191"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HDL5801573.1"
                     /translation="MSDVRIEHDLLGEREVPNSAYWGIHTLRAIENFNISNVTISDVP
                     EFVRGMVMVKKATALANGELGAIPKKIAKAIVAACDEVLVKGRCLDQFPSDVYQGGAG
                     TSVNMNTNEVIANLALEILGEAKGKYDIVNPMDHVNASQSTNDAYPTGFRIAVYNSIT
                     KLINKITYLQTAFENKATEFSDVLKMGRTQLQDAVPMTLGQEFKAFAVLLDEEVRNLK
                     RTAELLLEVNLGATAIGTGLNTPEGYSTLAVKYLAEVTQLPCSLSENLIEATSDCGAY
                     VMVHGALKRTAVKLSKVCNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPEV
                     VNQVCFKVIGNDTTVTFAAEAGQLQLNVMEPVIGQAMFESIELLSNACINLRDKCIDG
                     ITANRDICQNYVFSSIGIVTYLNPFIGHHNGDIVGKICATTGKSVREVVLERGLLTEE
                     QLDDILSIENLMNPTYKAKRFTEEE"
     gene            complement(53987..54265)
                     /locus_tag="PXF40_000192"
     CDS             complement(53987..54265)
                     /locus_tag="PXF40_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HDL5801574.1"
                     /translation="MQLFWPIYFVLMNLAALYLMYSDKQKAIKKEWRVPEITLLSFCL
                     LGGAIGVYLGMKYFRHKTQHWYFHVAVVLSTFAWLIGLPYFYLALSSY"
     gene            complement(54343..55380)
                     /gene="purM"
                     /locus_tag="PXF40_000193"
     CDS             complement(54343..55380)
                     /gene="purM"
                     /locus_tag="PXF40_000193"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011962107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HDL5801575.1"
                     /translation="MSNTQLSYKDAGVDIHAGNELVERIKPDVKRTRRPEVMGGLGGF
                     GALCALPTKYKEPILVSGTDGVGTKLRLAIDLNKHDTIGQDLVAMCVNDLVVQGAEPL
                     FFLDYYATGKLEVDVATNVVKGIADGCVISGCALVGGETAEMPGMYHEGDYDLAGFCV
                     GVVEKSKIIDGSTVKTGDALIALASSGPHSNGYSLIRKVLEVSRSNPATDLLEDKPLS
                     EHLLAPTKIYVKSILKLVEEVDVHAIAHLTGGGFWENIPRVLPESAKAVIDESSWQWP
                     AIFSWLQEKGNISRYEMYRTFNCGVGMVIALPERDVEKALTLLKESGENAWLIGKIED
                     LGTGSEQVEIR"
     gene            complement(55518..56390)
                     /gene="tehB"
                     /locus_tag="PXF40_000194"
     CDS             complement(55518..56390)
                     /gene="tehB"
                     /locus_tag="PXF40_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HDL5801576.1"
                     /translation="MENLICYKQMPVWTKATLPQMFQEKHNTKVGTWAKLTILKGSLK
                     YYELTEEGEIIKEDIFDANHQRPMVEPQLWHKVEALSDDLECQLAFYCKPEDYFAKKY
                     NLTATHSEVLNAVNYTKGGKALDLGCGRGRNALYLNLLGFDVTAVDHNQESIDFLNYM
                     IEKEQAQNITTAVYDINEATIGSQNGEYDLIISTVVMMFLNRERIPAIIENMQKNTKV
                     GGYNLIVCAMSTDDYPCPMPFSFTFKEGELADYYQGWELVKYNEDLGHLHKTDENGNR
                     IQLRFATMLAKKIS"
     gene            complement(56508..57020)
                     /gene="hpaC"
                     /locus_tag="PXF40_000195"
     CDS             complement(56508..57020)
                     /gene="hpaC"
                     /locus_tag="PXF40_000195"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HDL5801577.1"
                     /translation="MANIDTNQPIEASLKFREAMAHLSSAVSIVTTNGVAGKAGLTVS
                     SVCSVTDSPPTLLFCINKNSHVHDIIQQNGKVCVNVLSHEQEDLAKHFAAILESTMEE
                     RFGWDIWNNGFDDQPVLRSAISALQGNIVDTHAVGTHTIFVVEVSHIDVEPNHSLVYF
                     ARQFRSVNID"
     gene            complement(57033..57347)
                     /locus_tag="PXF40_000196"
     CDS             complement(57033..57347)
                     /locus_tag="PXF40_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HDL5801578.1"
                     /translation="MKKLTPDEAIDIAYDIFLEMAGENLDPADILLFNLQFEERGAVE
                     MVETSEDWDQEIGTLIDPDAFAEVWVGLVNEQDEMDDVFARFLISHDEENREYHVVWK
                     EK"
     gene            complement(57431..58021)
                     /gene="rsmD"
                     /locus_tag="PXF40_000197"
     CDS             complement(57431..58021)
                     /gene="rsmD"
                     /locus_tag="PXF40_000197"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HDL5801579.1"
                     /translation="MKKNRNSPQSVQQMGEVRVIAGLWRGRKLPVLNAEGLRPTTDRV
                     KETLFNWLMHDIAHSRCLDCFAGSGSLGIEALSRQAQAVVFLEKFANAANQLKKNLQA
                     LKSEQGSVIHTDTLAYLAQKNNGEPFNIVFIDPPFHQGFVPQVLNLLAENNWLAPNAI
                     LYVETEKNHPPLELPQGWQILKEKAAGMVVSRLIQL"
     gene            58100..59596
                     /gene="ftsY"
                     /locus_tag="PXF40_000198"
     CDS             58100..59596
                     /gene="ftsY"
                     /locus_tag="PXF40_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HDL5801580.1"
                     /translation="MSEKKKGFWSWLGFGKKEEAEQKEIQQEQESIQPEQPVIVEPET
                     EKSFSEKLDELEDKIEEKVDQLEDYFEEKEEKIEQFAEQVEDTIEQKVEDFKEFVEEK
                     VEEAKAFFDDVEDKIEQTFEEQKGEQAVENLQNIATEQLDLNEQEQVTYQVEEAVAEE
                     VAETELVNNVQDTVEESTIQDEYQEKPSQGGFFSRLIQGLIKTKQNIGSGFRNFFRGK
                     KIDDELFEELEEQLLVADLGMPTTQKIINNLTQHATKQQLKDADLLYQQLKVELGEVL
                     KPVAQPLVLEAKKPYVILMVGVNGVGKTTTIGKLARKFQQEGKSVMLAAGDTFRAAAV
                     EQLQVWGERNNIPVVAQSTGSDSASVIFDAMQSAAAKGIDVLIADTAGRLQNKNNLMD
                     ELKKIVRVMKKYDETAPHEIMLTLDAGTGQNAISQAKLFNEAVGLTGITLTKLDGTAK
                     GGVIFAIADQFNIPIRFIGVGEKIEDLRPFNAEEFIEALFSHEDEQND"
     gene            59589..60242
                     /gene="ftsE"
                     /locus_tag="PXF40_000199"
     CDS             59589..60242
                     /gene="ftsE"
                     /locus_tag="PXF40_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HDL5801581.1"
                     /translation="MIKFTNVNKVYKGGKPALQGIDFHLPAGGMAYITGHSGAGKSTL
                     LKLIMGIERANGGQILFNGHDITRLAHHELPFLRRQIGMVHQDYRLLTDRTILDNVAL
                     PLIILGMNQAIVEREARIALERVGLADKANYLPLHLSGGEQQRVDIARAIVHRPTLLL
                     ADEPTGNLDEKLSFEIFRLFEEFNQAGTTVLIATHDTNIISKRPKPCLVLEQGHLKF"
     gene            60252..61187
                     /gene="ftsX"
                     /locus_tag="PXF40_000200"
     CDS             60252..61187
                     /gene="ftsX"
                     /locus_tag="PXF40_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HDL5801582.1"
                     /translation="MIRSFSKLGAQTNYSLRAVWQDLMQRKLGTFLTVLVIAVSLTIP
                     TVSYLLWKNTHEAATQFYPEPQLTVYLHKNLAEHDVNTVVDRIRAFETDKIESFNYIS
                     RQQSLDEFRSWSGFGEALDILDENPLPAVVTLKPKANFNNADTMVELRNGLQQIKGVQ
                     EVRLDNGWLEKLTALTWLIARIAVVCTLLMLLAVFLVIGNSVRTDVANSKAAIEVQQI
                     LGATDHFIARPFLYTGMIYGLFGSLLAVLFSAVTISYFTGVVKYVTDMFTVQFELNGL
                     DFSEAFFLVVLCVFIGWLSAKIATMRNIFRIGSRG"
BASE COUNT        18581 a        12198 c        12891 g        17605 t
ORIGIN      
        1 cttacgttag cttatataga tttgaatgtt tgaaattaag tggctggggt actaggattc
       61 gaacctaggg atgccgagat caaaacccgg tgccttaccg cttggcgata ccccaacact
      121 aatttttgtt aatcgataaa tggtgcggga cgagggactt gaacccacac acctcgcggc
      181 gccagaacct aaatctggtg cgtctaccaa tttcgccagt cccgcaatgg tggctacagc
      241 gagattcgaa cttgcgaccc caacattatg agtgttgtgc tctaaccagc tgagctatgt
      301 agccatttgc gttcaccata tcggtcaacg gagtgcatta tgctgatttt agggctttcc
      361 gtcaaatact ttttttaaaa aatttgaatt tttgattcgc ttgtatagtt attcgtcgtt
      421 ttggcttaaa tctagcattt tttgtttata aaataatagc ttatattctg ctatttcacc
      481 gtttgcattt ctaattttaa ttgagccagt acaggctcaa catcggggaa ttgcccttcc
      541 cacaaagaaa acgcaaacgc tgcctgtcca accaacattc ctaatccgtc ttggcacgct
      601 gttgctccac aacgccttgc ataattgaga aaaggagttt gcatattggg ggcatattgc
      661 atatcgtaaa tattcgccga tgctataaca gattcaggca attcaacata tttgccttgc
      721 agaccgagag aggtggcatt gacgattaaa ttaaacagtt ggtttgccaa atcgcttaaa
      781 caagcggtct gaattttgcc aaattttgca aatttttcgg ctaaaacgac cgctttctcc
      841 tgcgtgcggt tatatagagt aatctctaac cccgctttaa gtaacggaag taatacgcct
      901 ttggttgctc cacctgctcc aagaattaag gttttatgcc ctttttgtaa ccaacctagc
      961 cgttccaaat cagaaactaa accggccccg tcggtattat cggcatataa ccgtccatct
     1021 tctaagcgtt taagcgtatt acacgcctgt gccaacaaag cggtttcgct aaattcatct
     1081 gccaatttaa aggctctttc tttaaaaggg gcggtgatgt tgcaaccttt tgctccagaa
     1141 gcgaaaaaat cggctaattg ttgctcaaaa gccgtttcat ctcctaagtt agcgatatat
     1201 tcaatgttgc gttgggtttg taaagcaaag agttgatgaa tacgggggga tttactttga
     1261 gcaatcgggt tgccccacac ggcatatcgg ttcatttcgg cttatccttg tctaaaaatc
     1321 tgttggctga aaatatctcg aatttcggaa gggttttctc tacctagcgt gtctgcgtgt
     1381 aatacaggaa aatcttgacc aaactgatcg atgacttctt ttgcattgcg gcaaggtggt
     1441 tctccgctca aattggcact ggtagaggtc aacgcaacgc cgcttgcctc acacaactga
     1501 accaccgccg gcacattaca taaacgtacg gcaatagaat caaatttgcc ggtgaggtaa
     1561 cttggcacag tatttttaac cggtacgatc caagtaattg cctgctcgcc aatatggctt
     1621 aggcgttgcc aagcctgttc cgtcattcga gcttcatcaa tatagggaag aagatacttt
     1681 aaatcagaag ccagtaaaat tagccctttt tcctcagggc gttgttttaa tacgagtaat
     1741 ttccttaccg ctttttcact ttgtggattg cagcctaagc caaaaaccgc ttcggttggg
     1801 taagctacaa cttcttcttg ctttaattga ttaactattt ctaaaaaatt attcattcgg
     1861 ttttaattct gtttggtgct ggcaactttt gttagcacaa atggtgaatt gcttgccctt
     1921 aatttttttg attgtagcga gttcacaacc acatttttca cacaagtggt taatcggtcg
     1981 agttgctaat gtaaatttgc aattagggaa gcctatacaa ccataaaata ttttgcctga
     2041 acgccctttt ctagcaatca gtttatgttg cttgcattca gggcaatcaa actcttcttc
     2101 aacctcagct tcttcgtgta cgatgaagtg gcattcaggg taatggctac agccgataaa
     2161 aataccataa ttgccttgtt ttaattggag gtttccgcca cattcagggc aaagttcatc
     2221 taattgctta ataatatgac cggcttgatg taatggctta atataatcac attcagggta
     2281 agctgaacaa cccaaaaata accctttttt gccctgctta atttgcaacg gcgagccaca
     2341 ttgtgggcaa gtttcggtct gtttggttga tttgaaaagt accatattga tttgctaaat
     2401 aagcgtaaat tcaatcacaa aaaacgcatt gtcattcgga taaatctccc gaataacttg
     2461 tttcaattcg gctaagctca tattttcttg tttagcgtgt tgctcgttta attcatcaaa
     2521 cactataggt gttaccgata gcactttaat attggcgaaa aatctatcgg tttcattagt
     2581 aaaaaccgct aattcttggt ttggttgaaa ataagattct gacttgtctc gaatcgtaat
     2641 tgttttttta ccgcttaaaa tatcggcttc aaatcggctg aaaaaggtaa ttttctctct
     2701 attcatattc atcgctactg taatccagag ccattaaatg actaaaatga tcgttataaa
     2761 aaccacggct aaccataaat cgccacattt tctgctttgc tttcagatcc catacaagcg
     2821 gtcgtttttt ctcaaaaatt tgctcagcta attcaaacca atccacttcg gcgttttcta
     2881 attcttggtt aattaaccaa tcttttaccc ctttaagttt tagctcttgc tttaaacggc
     2941 gaggcccaat gccttgcatt gaacgataac ggataaaagt ggtacaaaag cgttcatcac
     3001 tttgccactg attcgcttga gctttttcaa tcgctgcatc aatctccgtg agttcatact
     3061 ctttttgctt tagtttttgc cgaagctctt gctcgctgta atcacgcttt gaaagtaaat
     3121 atagcagata attaaccgct gtgtatttat ttgttttagt agtagatgtt gtcatttatc
     3181 ggttataaat aaaaatgcga ttttcacgtt gagcgaaaac cgcataaatt taattagagt
     3241 tcttcttcac taaattcatc atctgcattg tctgcatttt cagaatctgg agtagccgta
     3301 aaagttgggt ttgaaatgag tagatttcga atatcttgct caattttact cgccacttca
     3361 gggtgttctt ttaaccattt gatggcatta tttttaccct gaccgatttt ctccccttca
     3421 taagagaacc aagcccctgc tttattaatg aagccgtgag attccgctaa aatgagtaat
     3481 tcattcatac gggcaatgcc ctcaccgtac ataatatcaa attggacttc acggaacggt
     3541 ggagcaacct tgtttttcac aattttcact tttgtttcgc taccgataac ctcatcaccg
     3601 tcttttacta cgcctgaacg acgaatatct aaacgtactg aagcatagaa tttaagggca
     3661 ttaccaccag ttgtggtttc agggttaccg aacattactc caattttcat acgaatttgg
     3721 ttaatgaaaa tcaccaagca gttggtcgct ttgatatttg cggttaattt acgcaatgct
     3781 tgtgacatta aacgagcttg taagcccata tgggaatcac ccatatcgcc ttcaatctct
     3841 gcttttggtg taagtgccgc aacagagtcc acaataatta catcaaccgc accggaacga
     3901 actaacgcat cacaaatttc taatgcttgt tcgccattat ccggttgtga aattaataat
     3961 ccatctgtat ctacccctaa cttacgggcg taaataggat caagtgcgtg ttcggcatca
     4021 ataaaggcac aagttttacc atttttttgg gcttgagcca ccacagataa agttaatgta
     4081 gttttacctg aagactccgg tccataaatt tccacaatac gacccattgg taaaccacca
     4141 atgcctaatg ctgagtctaa accaagagaa ccggttgaaa ctgcttcaat atcaagggct
     4201 tgagtatcgc ctaacttcat aattgagcct ttgccaaatt gcttttcaat ttgagctaat
     4261 gcggctgcca acgctttttc tttttgttcc ggatcaatct gtttaaccgg agtgttcttt
     4321 tgactttttt tctctgccat attctatcct ttgtaaactt ttatctaaaa gcaaccgctt
     4381 gttgctgcaa aataactgta tattattata gtatttactt atccagttgc aagcattttt
     4441 ttaggatttt cgatcaagat cacaaaaata aatttgcgag caaggcaatg cccttggttc
     4501 ctcaaaggga ttaagagcat taatcaacat aattttttca tattgatgca aatcttgctt
     4561 ggctattttg gctaaaacga ctttcccttc atcaagcaat ttactaagct gagtgccttt
     4621 gagcaaataa tgttgcgggc tataccagat tccttgtttt aggaacagta aattgccgat
     4681 ggagcaatca ctgacgtagc cattattgag aataatcacc tcttcatttt gtaaaatagg
     4741 gagcaaatca aaccgcttgc ggtcgctaaa tttgaggtga taatcccaat tttccacctc
     4801 aaccaagcga aaacgttcta cttttttggg cgaatagata aaaaatttca gctcaaattc
     4861 tgttgcgttg taatctattc ggcaacgtac tttgccccgt tgagaagcct ctggcacaac
     4921 taaaatatca gcaaggctaa aacgaggttc acagccaaaa tattcttgtg ttgcttgctc
     4981 aaaacgttgt tgatgatact gtaagttctg aactttgccg tcaataatcg aaagggtttc
     5041 aaatagcgga aatcggcaca tagactttct ctaacagttc attatattca tcagttaaca
     5101 cactttgtga ggtaatgcca ccaccactat gaaacacaag cccgtttgag gtttgagcaa
     5161 tgtaacgaat tgccaccgca ctttctaagc tctcgccatc aaaataacca aaaataccgg
     5221 tgtagtaacc ccgttttcct aattctgctt gctgaataat cgaaaccgtt ttctctttcg
     5281 gtgcaccgct aatggagccg gcaggtagta attttgccaa tatcgaaccg atattttctt
     5341 gccaattttc acctaattcg ccacagatct cggaacttgt ctgcaaaatt gcccctcgat
     5401 gggtttctac tttttccaca taacggtatt tagtaacttc aatatttttc gccaccaacg
     5461 ccaagtcatt tcggatcaaa tccacaatgg tattatgttc ggtaaactct ttttccgaag
     5521 ccattaattt ctgctcggca ttctcctcat ttgcattaat tgtgcctttc atcgggtagg
     5581 aaaaaatgcg gttattttca attcgcacaa agcattcagg ggaaaaacag acgaacctgc
     5641 cttgcaaata acatttatat tttgctttgc tggcggcaaa aatttccgcc aatgaataat
     5701 tggtttcaat ggcagtcggg tagctcaaat tcagcaagta gctattgccg gcttgaattt
     5761 cctttttcac taattcaaac ccggtttggt attcgctaaa cggaatcgga tttgccgata
     5821 attcaaaagc tttagtcggt ttttcaaccg gcttttcgag attcgatttg caaaaaaatt
     5881 caaaaaaaag accgcttgcg tgagcctgtt ctagcggaaa aataagtggc ttttgctgct
     5941 caaaatcaat taaaaagaaa aaagggcgtt ttgcttgccc gtagtgattg gcttggtgaa
     6001 taaaatcttg catagaaaac acaatggctg aaattggctg aatcatcaaa agctctgtta
     6061 taatgcaaag caatagattt gaaaagcatt ttttaaaaaa ggttttaccg atgaacaaca
     6121 ccattcattt tcaagaaatt gggatctaca tcgcccttgc cgtttgtgtg ctggtaggcg
     6181 tttatctctt tttcttgaaa tcccgttatc agcgaaatgc ctacgaatta agccaagatc
     6241 ttggcaaaat caccgaaaat tttgaacaaa ttcagcaaaa atatgaggtg ttggctcaag
     6301 aaaaaaatca gcttgagcag tgggcaattc aacaacagac caaatatgaa gcagtgagtg
     6361 aacgtttaaa cgagcgagat gggcaattgc aacgattcca acaaaaaatc gaacttgccg
     6421 aacagcaaga aaaccagctg gaacgctata ttaatgagct aaaagaacgt gtgggttctt
     6481 cccaagcaaa ggcagaaagt ttggaagaac agctacaatt tagccaaagt tcactctcaa
     6541 ctaaagagcg ggaaaatcaa gcgttattta gccgtttaaa cgaggtacaa aacgagctga
     6601 ccgaactgcg tactacgctt tcggaaaaac aggcaaattt tgaagcacaa caacgcaatt
     6661 ttattgaggt aaaacaacag cttaatgtgg aatttcaaca tttggcacaa caaattcttg
     6721 acgaaaaaag caagcgtttt agcgaaacca atcaaagctc gttagaagct ctactgaagc
     6781 cgttcaaaga gcaaattgaa ggctttcaaa aacgggtgaa tgaggtacat agtgagtcgc
     6841 tcaaaggctc ggcaaattta gaggctgaaa ttaagcgggt gctacaaatt ggcgtttcaa
     6901 tgtcggaaga ggcacaaaat ctggcaacgg cattaaaagg caataataaa attgccggca
     6961 actggggtga agtacagctt gaaagtgcct tacaatctgc cggtttactc gcaggcgagc
     7021 attaccaagc ccaagagagt tttcgtgatg aagaggggcg acgttttgcc cccgattttg
     7081 tggtgcattt gccggatcaa aaacatctga ttattgacag taaagtctcg ttagtagcgt
     7141 acgatcaagc ggtcagatca gaagaaaatt ttgcaatttc tcaagcctta gacgaacatt
     7201 gccgttcgct acgcaatcat attgagggat tgtctaagaa gaactacagt gcattattag
     7261 gcattaaaag cccggatttt gtactgatgt ttattccgat agaaccggct tatattgaag
     7321 cgatgaagca cgatccgcaa ctgtttaact ttggctatga acgcaatgtg attttggttt
     7381 ctcacaccac cttaatgccg attttacgca cggtcgccaa tttatggcgg attgaacgag
     7441 gcaacagcga ggctcgtgaa atcagcgaaa aagccggcga aatttacaac caagtgtgtg
     7501 cggttgccga tcggttagct aaattaggta acacgctaaa taccgcaaat aatcaataca
     7561 atcaaaccgt tacctcgtta gtgggacggc aaggcttact gggcaaagtg gaacgattcc
     7621 aacatctttc aagcaaagca agccaaattg tgccgcaggt tgagctgatt gaaaatgagg
     7681 tggatactat taaattggaa atggtatcga gagaattatt ggaagaatag tcaaatctct
     7741 ttattcccta caaaaatatg gggtgatttg aaatactaaa gaaaataata aaatgctaaa
     7801 aaaactatta atcatcgaca accacgactc ttttaccttc aacttggtgg atttactccg
     7861 taagcttgat gtgccggcga aagtggtgct ggttgaagag cttgacctca atgaggtgga
     7921 gcattttagc catattttga tttcgcccgg ccctgatgtg ccgagagcct atctacaaac
     7981 ctttgcgatg ttggagcgtt atcatcaaac caaatcaatt ctaggcgttt gcttggggca
     8041 tcaaacgatt tgcgagtttt ttggcggcaa gttgtataac ctaaacgatg ttagacacgg
     8101 gcagcaacgc acgctcactc aaattgagcc taaccccata tttaaaggtt tgcctaagca
     8161 gttgaaagtt gggttgtatc actcttgggg cattttgcaa aattcgttgc aaaatacacc
     8221 gcttgtacca accgcagttt gcgatcaaaa tgtgttaatg gcgtttaaac accaacattt
     8281 gccgattttt ggcgtgcagt ttcacccgga atcttttatc actgaatttg gtcaacaaat
     8341 gttggcaaat tggcttgaga ttacacaaga tttttagcgt gaaatccgct ataatccgtc
     8401 agttatttac ccttttaaaa tctgtagggg cgaaaaattt ttcgccttac ttaatatgca
     8461 agagataatt taaatgaaag attcgattat caataaatta gaaagtttaa gtgaacgcca
     8521 cgaagaacta caggcgttac ttggcgatgc ctcaattatt tccgatcaag acaaattccg
     8581 tgcttattcc aaagaatatt cgcaattaga agaagtggtt ggcaccttta accgctggaa
     8641 aaagctgaac aatgatattg aagaggctca attattactc gatgatcctg atatgaagga
     8701 tatggcagcg gaagaaattg cggaaaataa agccgaaatc gagaatcttg agcaacattt
     8761 acaaatttta ttattgccga aagatccgaa tgatgaatac aacgccttcc ttgaaatccg
     8821 tgccggaacg ggcggtgacg aggctggtat ttttgccggt gatttatacc gtatgtacag
     8881 ccgttattgc gaaagtaaac gctggcgaat tgaagaaatg tcggcaaatg agagtgaaca
     8941 aggcggatat aaagagatca tcgttaaaat ttcaggcgaa ggcgtttacg gtcagcttaa
     9001 atttgaatcg ggcggacacc gtgtacaacg tgtaccgaaa accgaatcac aagggcgtat
     9061 tcacacctct gcttgcacgg tagcggtaat gccggagttg ccggaaagcg agatgccgga
     9121 aatcaatcca tctgatctgc gaattgacac ctaccgctca tcgggtgcag gcggtcagca
     9181 cgttaatacc accgactctg cagtgcggat tactcatatc ccgaccggga ttgtggtcga
     9241 gtgtcaagat gagcgttcac agcacaaaaa taaagccaaa gcgctggcag tgttagcctc
     9301 tcggattgta caagttgagc aagaacgcca agccgcagag caagcggata cccgccgtaa
     9361 cttacttggc tcaggcgacc gttcggataa aatccgcacc tacaactacc cgcaagggcg
     9421 tgtgactgat caccgtatta acctcacggt ttatcgttta gacgaagtga tgaacggcaa
     9481 aattgatgaa ttgatacaac cgattatcac tgaatatcaa gcggatcagt tagcggcgtt
     9541 gtcggagcaa aattaatttt attgtaaggg tacactgtgt gtgcctgcca aatataaatt
     9601 tgcaaaattt tgactatttt tgatcgcttg tagtttctaa aaagtttaaa aatttgagga
     9661 aaacaaaatg agaaagttag gtttattagc agtatttact ttagtattat cagcctgttc
     9721 aaattcaaca aaaattgaac aaaccattct ttccaagcag gatatcgtag gctcttgggt
     9781 atgcgctatt aaatacgatg atctaaaagt aagcacttta gatttttctg aatttaaagc
     9841 taatggcgaa atgacgaatt tcggtgatat ttctgatgag aattttgagc ccattaaatt
     9901 tacttatgta acaggagata aagggaagtg ggacttaaaa ggaaatcgat tagtgattga
     9961 ttatgatctt tctgaacgta aagtaaaaag aacaacacca aaaaaatttt tagagttctt
    10021 gaaacaggaa gagcgtaaag cctcaaaaac agctaaaaaa ctccttaaat atgaacaagg
    10081 gattttcaat attctgagtg atcagaaaaa tactgaaaac agtaaaataa tattagatat
    10141 tttgaagttt ggtcattcaa gaatggcgat tcagcaaaat atgggagaca aagtttattc
    10201 aggtggttgt gtaacagctg ataaagcaga agagtattta gatatcctaa aaaatagaaa
    10261 ttctaaataa tggattaccg agagtggctc acttttgctg agcaaaaatt acttgaaaat
    10321 agcggggcag atccatacct aaacgcaaaa tttgatgcaa atttgctatt gcaagcagtc
    10381 acaaaacgtt caaaatcggc catttttgct ttttcggaaa ccctactttc tgaaagcgag
    10441 cttgcagaat tagcggaaaa attagctcgg cgtgccaaag gtgaaccaat ggcatatatt
    10501 ttaggctatc gggaattttg gtcgttgccg ttaaaggttt caccggcaac gctgattcct
    10561 cgccctgata cggaacgact ggttgagttg gcgttggaat atgctaacaa gcggttagga
    10621 aatcagaaaa tgttgcaaat tctggatctc ggtaccggca cgggggcgat tgcgttggca
    10681 ctggcgagtg aattaggcga gaaagcccaa attatcgggg tggatttcca aaatgaggcg
    10741 gtgcaactgg cagaagaaaa tcgccgaaac ttaggcttaa atcaagttac atttttacaa
    10801 agcgattggt tcagttcgct tgcaaatcaa caatttgatt taattgtctc aaatccgcct
    10861 tatattgatg aatcggacga aaatttgacg gtgggagacg tacgttttga acctttaacc
    10921 gcattagttg ccgataataa ggggttgagc gatttgcaaa aaatcatcga aaatgcaccg
    10981 cttcacttaa aaccgcaagg ggcgttaatg ctggaacacg gctggaaaca aggtaacttg
    11041 gttcgagatt tatttgattt acacttgtgg gaacaggtag aaactgctca agattatgcc
    11101 ggcaatgacc gagtaaccaa agcgatttta aaataaggca gaaaatggac gatattattg
    11161 aagaattgtt aaaagagttg gaagatccga aagtaaccat cagcgaaacc gagctgaaaa
    11221 agtttcttta tcgtgaaatt ttacgattaa ctacgctcat tgataagaat gtaagtgagc
    11281 aacaagtgtt tggtcagatg tctgcgttgg tgaaaaaagc tcgctataac gtgaatggcg
    11341 aaggcgatga agagagaatt aaccaattac ttcatttagt ctatcgtgaa tggggctttc
    11401 attgctacta tgaagactat ttccacaccg aaaatttgtt gctaaatcaa gtaattcgca
    11461 aacggcgtgg aatgccggtt tcacttgggg cggtggcgct ttatttatcc gccgtattgg
    11521 atttgccgct ttacccggtt aattttccga ctcagcttgt gttacgggct gaaatacacc
    11581 agccgaacgg ggcaaccaaa gtgcgtttta tcaacccgtg gaacggtgaa tttctcacca
    11641 tcgaaatgct gaataaatgg ctggaaggag aaatgggctt tggcgtagaa gttacccctg
    11701 atttgttaag acgagcagaa ccacaagagt tgctggaaag ggtcgaaact gtgtttaaaa
    11761 tggcacttac ccgtgaaggc aaatatgaag aaaccttacg cttgattgaa taccgcttgg
    11821 catttagccc ggaagatccg tacgaaatca gagaccgagg aatggtactg gcaagtatgg
    11881 attgctacca agcagcatta gaagatatta attatttcat tgaccaatgc cctgaagatc
    11941 cttctgccga aattttaaaa atggaagtga aaggactgca acaaaaaagc caagaaagtg
    12001 tggtgcatta agctgagaag tagccccaaa ggggctgagc tatgattaac ctagtacggc
    12061 tctgccgtgc taggcagaaa ataagaaaca aggactccct atgacagata aaattgtaaa
    12121 agttggcaat attgaagtgg ctaatcacaa accgtttacg ctttttggtg gtatgaatgt
    12181 gctggaaagc cgtgatatgg cacttagagt atgtgagcaa tatgttgaag tcacgcaaaa
    12241 actaaatgtg ccttatgtgt tcaaagcctc atttgacaaa gcaaaccgtt cttcaatcca
    12301 ctcttaccgt ggaccgggaa tggaagaagg cttaaagatt ttccaagaat taaaacaaac
    12361 ctttggcgtg aacatcatta ccgatgttca cgaaatttac caatgtaaac ctgtggcaga
    12421 agtagttgat gtgattcaac taccagcatt tttggctcgc caaaccgatt tagtggaagc
    12481 aatggctcgt accggtgcgg ttattaacgt taaaaagccg caatttttaa gcccgggtca
    12541 aatggggaat atcgtagaaa agattgctga atgcggcaac gatcaagtga ttttgtgcga
    12601 ccgtggcact aactttggct acgataatct agttgtggat atgcttggtt tcggcattat
    12661 gaaaaaagtg tcgaaaggtt gcccggtgat ttttgatgtg actcactcat tacaatgccg
    12721 tgatccattc ggtgcggctt ccggtggtcg cagagatcaa gtaaccgaac tggcacgctc
    12781 cggtatggcg attggtttag ccggcttgtt cttagaagct cacccggatc caaactcggc
    12841 gaaatgtgat ggtccatctg cattaccgct gtcaaaatta gaagcctttg tttcacagat
    12901 gaaagcgatt gatgagttgg ttaagagctt tgaagaaatt gatacttcca aataaacttt
    12961 ctccgcatta aatcctttcc tactttcttt gcttcgccaa agaaagtagg caaagaaagg
    13021 cgaccctact tcgctacttt tcttcgctta gtgtgaatgg gcttaacgaa aaatttacat
    13081 tcgcttcgct cagagtaaat tttcctaccc attaaaacac gctcaggtag ctcagaaggg
    13141 agttagaaag gtaaaagaca gaataggaga aaaaaatgct aaatattgtt tttcttgacc
    13201 gtaccggtat tcctgccact cacgatattc ctcgtccgaa ttttccacat acttggacgg
    13261 aatatgccac cacctctgcc gatcaaactt ttgagcgggt aaaagaagcg gatattatca
    13321 ttaccagcaa agtgttactc cagcgtgact tgctggctaa attaccaaag ctgaaattaa
    13381 ttgcgatcac agcaaccggc acgaacaatg tggacttagc ggcagcaaaa gagttaggga
    13441 ttgcagtgaa aaatgtaacc ggctattcca gcgttaccgt gccggaacac gtcattggta
    13501 tgatttactc cctgaaacat cgtttagccg attatcaccg tgatttaatt acgtctgacc
    13561 gctgggcaac ttgcggccaa ttttgctatg tagattaccc gatccacgat gtgcgaggct
    13621 caaccttagg cattttcggt aaagggaaca tcggggctga agtggcacgg ctggcacaag
    13681 cggtcggaat gcaggttatt tttgcagaac atcaaggcgc aactgaaatt cgagaaggct
    13741 acaccgcctt tgaagaggta ttcaaacaag cagatattat ttcactacac tgccctttaa
    13801 ccgagcagac tcaaaacctg attaatgcag aaaccttagc cttaatgaag ccgaccgctt
    13861 atattatcaa tacgggtcga ggcccactga ttgatgaaca ggcattgctt gaggcattag
    13921 agcaaggcaa gattgccggc gctgcgttag atgttttagt gaaagagccg cctgaaaaag
    13981 acaacccttt aatgttagcc gcaaaacgtt taccgaattt actgattacc ccacacgttg
    14041 cgtgggcaag cgattctgcg gttacaacac tagtgaataa agtgacacaa aatatggaag
    14101 agtttgtagc aacgggtatg tagcttgaag taggggctgg tcctgtgcca gccctaatat
    14161 taatagaatg agagggcggg tataaaaccc gcccctacca atatcatttt agaaaaacag
    14221 atgaatttaa cccctttttt tattgctttt cgctatttta gatcgaaaag tgctgaccgt
    14281 ttcgggcggt tagtcaccaa tcttgccagc cttggcattg tgctgggcgt aatggcattg
    14341 gtgattgtgc tgtcggttat gaacggtttg gaaaatatgc agaaaaccaa tctgctatcc
    14401 accttgccgc acgctatcat cacccctcaa gaggggcatt ttgccaaagg tgaaaaactg
    14461 gctctacctg aatttgccaa gcaaagtgtg gtgattaacc gtgcgaatgt gattatccaa
    14521 agttcacaag gcattaacgc cggtcagtta atcggcgtgg aaaatgccac agacgatccg
    14581 ttgttagtgg cggaaaatat ccccgcatta ttgcctagcg gtgaatttaa ggtagtaatt
    14641 ggctctcgtt tagccaataa attgaacgtt acggtaggcg ataagctccg cttaatgatc
    14701 actgaaaaca gccaatatac gccacttggg cgagtgccgg tacagcgttt gtttgaaatt
    14761 tcgggcgttt atcaatctaa tcgtgaagcg agcgaattta ccctctttgc taatttagct
    14821 gatgtcgggc gtttgcttcg catcagcgaa gatcaagtac aaggcgtgcg tttatatttg
    14881 caagatcctt tccaagttac cgaacttagc caatatttcg atgcagaacg ctaccaaatc
    14941 agtgattggc gtgagcaaaa aggcgaattt ttccaagcgg tgaaaatgga aaaaaatatg
    15001 atgggcttac tcatcagcct gattattgtg gttgcaattt ccaacattgt gacttcactc
    15061 agtttgatgg tggtagacaa acagggcgaa attgcaattt tacaaaccca aggcttaacc
    15121 aaaaaacaag tgatgcagat ttttgtgttc caaggggcga ttgtcggagt aattggctcg
    15181 attattggtg gtttgctcgg cgtattgatc gcctacaatt tagatcagat tatcctgcta
    15241 ttaaacccga gcatccatct gcctacccta atttcaggca cgcaaattgc ggtcattgta
    15301 ggggtgtcga tgttgctttc actcctttgc acgctttacc cggcataccg agcctcaaaa
    15361 attgagccgg cacaggcatt gagatatgaa taataagaac ggaaataaaa tgacagaatt
    15421 acttcgctgt gaacatatca gcaaatttta cgatgagggc gaacagaaag ttcaggtgct
    15481 aaaagaggtg tcattttcga tgaacgaagg tgagctggta gcgattgtcg gtagttcagg
    15541 ttccggcaaa agcaccctat tgcacacatt aggcgggcta gatcagccaa gcaccggtga
    15601 agtctggatt cgagggcaat ctctgcaaca gctcagttca gacaaattag cgttattgcg
    15661 taaccaaaac ttaggctttg tgtaccaatt tcatcactta atggcagact ttaccgccct
    15721 tgaaaatgtg atgatgccga tgctgatcgg caaacagaac aaaactgaag ctgccaatcg
    15781 tgccgagaaa atgctacaag cggtcggatt agctcatcga atgacacatc gcccatcagc
    15841 actttcaggc ggcgaacgcc aacgggtggc gattgcccga gcgttggtta ataatccggc
    15901 tctggtactt gccgatgaac cgaccggtaa tttagaccaa aaaaccactg aaagcatttt
    15961 tgagctgatt caacagctca accaagagca gaacattgcg tttttattag taacgcatga
    16021 tttaaatcta gcgaataaac tttcacgtag tcttgtaatg cgagatggcg tgttaagcga
    16081 ggggagctta tgagtacgcc gtttttcatt agctggcgtt accaacgggg caaacagaaa
    16141 aacaaactgg tttcactgat tgctctcttt tccaacatcg gtattgccct tggggttgcg
    16201 gtattaatta tcgggctaag tgcaatgaac ggctttgagc gagagctgaa taatcgtgtg
    16261 ctttcggttg tgccacacgc tgaactggtt tcgtttcaag gcaatcagcc tcaaccaatt
    16321 tttgatagca aaaaattaga ggcattgata aaaaaatcgc aaaatgtgac cgctagttcg
    16381 ccttttgtca gctttaccgc cttaattgaa aatggggctc agcttaaaat cgcccaggtg
    16441 cgaggggttg atcctaaaaa gcaagatcag gccagccaat taagccaatt tattccaccc
    16501 gagcaatggc aagcgttcaa tcagcaattt caagccgatg aagatggctt gattttagga
    16561 gccggtattg ccaaagcgtt agaagttgag gcaggagacg aagttacgct tttaattcct
    16621 cagccaacag aagacggcaa attagcccag cccttgcgtt ttaacctaaa cgtaaccggc
    16681 attttgcggc tagatgggca gctggatcac agttatgcct taattccact gaataaagct
    16741 caagagctga tggaatacca agcgaatgaa gtgtcagggc ttgaaatcag ccttgccaat
    16801 ccgtttgatg tacaacagct tgaaatgcca caacttaacg gctataccca accgctttat
    16861 ttgaatacgt ggattgataa attcggttat atgtataacg atattcaact gattcgcacc
    16921 gtgatgtaca ttgcaatggt tctcgtgatt ggcgttgcct gttttaatat tatttccacc
    16981 ttgattatgg cagtgaaaga caaacaaggc gatatcgcga ttttacggac actgggggca
    17041 aataacggtt ttatccgccg cattttctta tggtatggct taatttcagg tatgaaaggg
    17101 gcgttattcg ggctgatttt aggtgtaatt ttatcgctaa atttaaccgc tattatcaaa
    17161 gcgattgaag cattctttga ggtgaaattg ctttcagacg gggtttattt tgttgatttc
    17221 ttaccaagtg aattacattg gcaagatgtc gtctatgtat tggcagccac gattatccta
    17281 agcctttttg ccagcttata ccctgccaac cgagccgcta aattagaacc ggcaaaagtg
    17341 ttaagtgggc attaatcatt ttcctattct aataaaaaag cagctacccc tcgattatgt
    17401 cagaaaggta gctgctttta tttatgttat tactcttcgc ctaataattt caactcacga
    17461 gccttaattt ggttttttag aatttcaact aagtctgaaa cgaggtaagt acctaagtct
    17521 gcacctttac gggtacgcac agacacttta ccttcggcga tttctttatc accgcaaacc
    17581 aacatataag gcacacggcg taaggtgtgc tcacgcactt tgaagccgac tttttcgttg
    17641 cgtaagtctg ctttcacacg aatgcctgca tcagaaagct gtttcaccac ttgttgcaca
    17701 taatctgctt ggctgtcggt aatgttcatt accactgctt gggttggggc aagccaagtt
    17761 gggaagaaac cggcatattc ttcggtgata atcccgatga aacgttcgat cgagcctaaa
    17821 atcgcacggt gaatcattac cggtgtgcgg cgaccattat cttctgctac ataagaggct
    17881 gctaaacgac ccggtagagc gaagtcaagt tgcactgtgc cacattgcca ttcacgtcct
    17941 aagcaatcac gcaatgcaaa ctcaattttc ggcccgtaga atgcaccttc gccttcttga
    18001 atttcatatt caagtccgtt gttgcgtaag gcgttggcta agcctttttc tgctctgtcc
    18061 cacattgcat catcaccgat acggttttcc ggacgggttg aaagttttac tgcaatgtta
    18121 gtaaaaccga aggtgctgta aatgtcgtac accattttga tacagctgat tacttctgac
    18181 tcgatttgtt cttcagtaca gaaaatatgg gcatcatctt gggtaaaacc acgcacacgc
    18241 attaagccgt gtaatgaacc ggacggctcg ttacggtgac acgaaccaaa ttccgccata
    18301 cggatcggta aatcacggta agatttcaag ccttgattaa agatttgaac gtgacccggg
    18361 cagttcatcg gcttaattgc atattcacgg ttttccgatt gggtagtgaa cattaaatct
    18421 gcgtagtttt gccagtgtcc ggttttttcc caaagcacac gatccatcat aaacggacct
    18481 tttacttctt ggtaatcgta ctctttcaat ttggtacgca caaaagtttc aagttcacgg
    18541 aaaatcgtcc agccgtcatt gtgccagaac accatacccg gtgcttcttc ttgcatatgg
    18601 tataaatcta acgctttacc gatacggcgg tggtcacgtt ttgccgcttc ttccaaacgt
    18661 tgtaaatatt cggctaattg ttttttatca gcccaagctg taccgtaaat acgttgtagc
    18721 attttatttt tgctgtcgcc acgccagtaa gcacccgcta ctttttgtaa tttgaagtgg
    18781 tggcagaaac gcatatttgg tacgtgtgga ccacggcaca tatcaatata ttcttcgtgg
    18841 tgatataacg caggcgttgc cgtacgttca atattttcat ctaaaatcgc cattttgtat
    18901 ggctcaccac gtttctcaaa ggtatctcga gcttcttgcc agcttaccgg gcgttttacc
    18961 acgtcatagt tggtttttgc cagctctaac atacgctttt caagagcgtc taaatcttct
    19021 tgagtcaaag agcggtctaa atcgatatcg tagtagaaac cgttttcgat agtcgggccg
    19081 atagccattt taacgtctgg gaataattgc ttgatggagt gacctaacaa gtgagcggtt
    19141 gagtggcgaa tgatctctaa accatcttcg tctttggcag taatgatttc aagtgtgctg
    19201 tcttggctga tgatatcaga cgcatcacgg cgttcaccgt ttacacgacc ggcaatggtg
    19261 gctttcgcta aacctgcccc gatagattgg gcaacttcca ttacagaaac tgggttgtca
    19321 aatgaacgtt gtgaaccgtc cggtaaagta ataattggca taataaatcc ttacagtggt
    19381 aatccatacg agagattact tgtgttgttt gaatgaaaaa accgcctaca agcggtcttt
    19441 tttgattaaa attttgcaat ttgcttatta tttcccttac aagtggggaa taaaagcact
    19501 gaaattctag cataaaacaa agaaaaatta aactttgctg ttttcagcgg ccccttcatc
    19561 aagctcaata ttttcatttt ctgtttgtgg atcttgttca agtatttcaa gctgagcctg
    19621 gtactcttgt accgcttctt catcaaatgg aataagtgcg tcctcaacaa cttcaatttc
    19681 ttcaagtggg cttgcggttg caattggggt agcatattgc atctctgctc gttccgcttt
    19741 cggaattgat ttggtgcgga aagcacaaat aaataaacta agtgagaaca gtccaaaaag
    19801 tgcataaaag ccatattcag cggaaaggct catcgcaaaa ccgataagcg gtggagcaac
    19861 taacgccccc acaccatagc aaaacagtaa acccctgctt acttcaaccg tgttcatatt
    19921 attcggcaat tcatcgttgg cacgggcaat gctcaaagca tataagctaa acagactaca
    19981 gccaaagaaa aaggcgataa tatactgtcc ccaggcggtc aaattttctt ggaaaattgc
    20041 aaataatccg gcaagtgcgg ttaaagtggc aatcactgaa caagctaaaa tggcgttacg
    20101 tctgccaata cgattcgata atatcgccat cggcatttgg ctgataaaac caccgatcat
    20161 cgagataatc aaataaagcg agatttcact taatgaaaag ctaaacttca gcagaaagac
    20221 tgacgccatt gtaaaaaagc cgtttaccaa cattccgcta ataaagctgg ttgctaaggc
    20281 taacggtgaa atcgcaaata gtttaggaat actaatgcgc tctcgagccg gaatatcagg
    20341 ctgaaccatt ttagttaaag caattgggat catcgacatc acaaccaaaa tggtagataa
    20401 gataaaaatg tttcggctac taagttctaa acttaataaa cttacgccta aaataaaggc
    20461 gagatagaag ataatgttat aagtggcaag cactttgcct ctggtatcga cattggtttt
    20521 ttcgcttaac caactttcga ctaaaagcag caagctataa tgacagaatc ccaaaataat
    20581 tcgtaacacg ccccagatcc acaaagtatc aatcataata tgaccgagag cggcgatagc
    20641 aaaaacagca cagaaaacgc taaatgaacg gatatgccca acacttgata caatgcggtg
    20701 agcaaaaata gtgcttaatg ccgccccaat aaagaaagca gcgttaagta aaccgatgat
    20761 gatgtccgtt atccccattt ctgccagttt gatccctgct gaatttagaa ataaaccgta
    20821 gccgaaaaac agaaaaaaga tacctgaata aagggagtaa aatttagtgc tattcatcaa
    20881 tgctccttca aacattctgc cagtattaaa tcattgtacc gatttaatac cttttaggca
    20941 aaaaagttat tattagcgtt gagaaaataa cttttggcta ttttgattaa aaaatcaaat
    21001 gaaggtgatt ttgaaatgta gtaaaaaata gagcaatcag aattgaaaaa gggtttgccg
    21061 taacaaagcc tttagaaaga ttagagtttc gagaagaatt tgtagcttgg gctaaccaaa
    21121 acacttgcta ggagtgcttt aagcacacca cctaaaataa atggatataa gcccgcttgt
    21181 aatactgtgc cttctggtac aaagaaagtt gagccaagcc gaaagcaaag gtgatcacac
    21241 ttgcaattaa ggcgacaaat aaacttttcc aaaaagagtt taatacgcct ttatcgctat
    21301 aatagcctaa gaaataggcg gttggaatat agcctaataa gtatccgcct gttggaccaa
    21361 agaaatgatg gaaacctgaa gcaccgccgg caaagacagg taaaccaatc gccccttcaa
    21421 aaagataaag taatactgca gcagttgcgg ctttacgacc cattgcaaaa ccaaccacag
    21481 ttaaagcaag tgtttgccct gtaatgggta cagggtacat cggcacagaa atttgtgcaa
    21541 aaatagcaag cagtgttgct ccaataaaag ttttcaacca aaatgtagtt atactattgg
    21601 cttctagcca acgtttagtt tgaattaatt gcgtagtgaa cataatcctc tcctttaata
    21661 tggttaaaat gttctcaacc gattatataa gaagatgtct tttagggtaa gagtgaattt
    21721 aaaatggtaa aaccagttta tatttattgt gatgaaggta gcagtgaaat tggtgttcaa
    21781 tcactgttat tggcagtaaa acagcattta cagcgtccgg cttatctcat caatgccaaa
    21841 caaattattc aaagcaagtt ttccgatggc tgtttattaa tcatgcccgg tggagccgat
    21901 ttaccttact gcaaaaaatt aaacggagaa ggcaatcgta gaatccgcca atttattgaa
    21961 caaggtggag cttatctcgg tatctgtgcc ggagcttatt atggctgtgc tgaattgaat
    22021 tttgtagggc gtgactatag cgtaaatggt aatcgagaac tagctttatt taatggcatt
    22081 gcgggcattg cgaaaggcag tctgccgcag tttaccaacg ggcaacttta cgataaaaac
    22141 attggtagca aagcgatagt tgaagtaaca cttgcagagg gtggaaaaat gccgttttat
    22201 tatcacggtg gttgctgttt tgaaccaaat tcaacaacag tgatttacaa cccgttggct
    22261 tattatcctg atggctcagt agcaatgata gagggagagc tagggcgagg ttactatctg
    22321 ttgtcgggtg tacattttga attacaagcg gtcgtttatt ggcaaaaaat tgtaaattgc
    22381 tgtgaaaatc ttgacataaa aacacaagaa gaagcaattt gctctaattt taatgtaaat
    22441 tatggctcgc aaatttggca acatctaaag caacgactaa atcaagcgta aaaaaataac
    22501 ctttcgctat tctgccaaat ggtttctgca atcagatttg gtgattctgt tcttaattca
    22561 catagactat tgaaagtcac taaaagccgt tccggtcggt tcggctggcc ttgaaagcca
    22621 aacaccggca tatcgggcga gtcggtttcc agtagtaaac tttcaagagg tagtttgcgg
    22681 atagcctcac gggttttgtt agcacgttca taggtaatag ttccccccac accaatttta
    22741 taaccgagat cgacaaaacg ttttgcctgt tcatagctgc cggcaaagcc gtgaaccaca
    22801 ccggttttgg ttagttgggc ttttttgagg aacacaaaaa gttgatcgtg gcttttacgt
    22861 gaatgaagat taacgggtaa attaaatttt ttcgcaaggg aaagttgtgc ctctaaaaat
    22921 tcacattgct ttttccataa ttcaggggta gaaacttcac ttaccgcttt ttccaaaccg
    22981 atttcggcaa tagcggtaca ctgtggatct tgttggctta gcaaattttc caataagatt
    23041 aaatcttgtt gttggtgctg ttgaatatac agtggatgca accctaatcc atacaccaaa
    23101 ttttccggtt tttgtttggc acaagcggtc acttttgcaa aattttttgc aaatacggca
    23161 acgataagaa tgcattcaac ctgatgctgt ttggcattct caaccaattc cggaatgctt
    23221 aaattcaggc tttctgcgag atagtcgagg tgagtatgag tgtcaaaaaa tcgcataata
    23281 aaaccaataa aaacggggac tagattgtcc ccatttttag cattttacgc aagcaattag
    23341 tttgttacat aagcatcttc atcacgagcc tcagatggct tgaggaaagc aaagaagcaa
    23401 ataacacaaa ctaccgtaat cgcaaaaccg atataaactg ataattcata atctaaaccg
    23461 aagccgattt tgttgttcgc aaggtaagtt gcacacacgg tagtgataaa ccatgcagga
    23521 atcgagcata cccagtggaa ttttttatag cggtataagt aacctgcggc agtccataac
    23581 ataaccattg cagtcatttg gtttgcccaa gtgaagtaac gccataatac gctgaaatca
    23641 acttttgaga caatgaaacc aagtacgaat aatggtacgg caatatacaa acgttttact
    23701 aaggtacgtt gttctaaacc aaagatttcc gctagttgta aacgagcggc tcggaatgca
    23761 gtgtcacctg aggtgattgg taatactaca acgcctaata cggcaaaaat accaccgata
    23821 aaccctaaga agtgtaacga gctgtcatat accactttag acggtgaacc ggcagagatc
    23881 gcatcttgta aggcttgtgg gttttcatag aatgaaagac ctactgcaca ccatactaat
    23941 gcaattaccc cttcagtaat cattgcaccg tagaaaataa aacgaccttc tttctcattt
    24001 tgcgcacagc gagccattaa tggggtttgg gttgcgtgga aaccggataa tgctccgcaa
    24061 gaaatagtta agaatagtaa tggccaaatt ggaacatcac ctttcacttg gaagttttgg
    24121 gtgaattttt cccacgttaa gccttgaccg tctgcattca ctgtacggaa gaagtcgata
    24181 ggatcagtcg cacttaagtg agcgctgact agaccatata ccatacctac agacataaag
    24241 agtaataatg ctccgaagaa aggataaatt cgaccgatga ttttatcaac aggtagtaat
    24301 gtagcaagaa tatagtaagc aaaaatgatt aacgtccaca cagaaatcac ggttgcttta
    24361 tccatacccc aaacggttac gccacctgat gctacagatt ctttaattgc ttcaacatca
    24421 cctaattcca ttgcactttg ggttgcacct gcaatatcca tggtgatggt agagagtaac
    24481 tgagcagggc ttgcaacgaa aactacgcct actaataaaa gcaagatgag cgccattacg
    24541 ttgatgaata acttgactgg acgacccaag aatttccctg ccagatttgg catcgttgcg
    24601 ccaccgttgc ggatacttaa cataccacag aagtagtcgt gtactgcacc ggcaaaaata
    24661 caaccaatca caatccaaag cattgcaact ggtccgtata aggcaccaag tattggtcca
    24721 aaaatagggc cggtaccggc aatgtttaat aattgaatca gccaaatctt ggttttagac
    24781 attggcatat agtcaacacc gtcgttcatt gcataagccg gcgttgctct tttcgggtta
    24841 atcacgaaga ttttttcaat gatttttccg taagtaaagt agccaagaac aagcacggct
    24901 acacagaaaa agaaccacaa catagtagaa atcctataaa ttgagataaa tgatcatttt
    24961 tagcagaact gataaaggcg tgccattgta agtgaggagt gaggataaag taaaatgaat
    25021 tgttagattt gtgtgaataa tttactgaaa atgtgaggtt catcaaaaaa tccctttgtt
    25081 ctgcgtcaat caaagggact ttttaaagtt aaatatcgaa tttttgaatt ttcgcttcaa
    25141 tgccttgggc atctaatcca agatcggcat aagcttcagc ttgagtagat tggggaacga
    25201 aaaagtcagg aataccaagc attacaagcg gtttgatttt gccgatattt tgcaaatatt
    25261 cattcacaaa actacctgcg ccaccttgaa tagcattttc ttcaagcgta actaacaact
    25321 cgtgtgaatc cgccactttt tgaagtaatg cttcatctaa tggtttaatg aaacgcatat
    25381 ctaccaacgt gtagttatgt ttttcagcca caatctttgc ttcatcaagc aaagcaccaa
    25441 aatttaaaat cgcaactttt ttaccttcac gaataatgtt tcctttacct acttcaagtc
    25501 tttgcattgg ctcaagtttt acccctttag cattgcctcg agggtaacga atagcacttg
    25561 gcgtattcat cgtgtaagcg gtataaagca tttttcgcat ttcattttca tcgctcggtg
    25621 ccataatggt catattggga atacaacgca taaaacttaa atcaaatgca ccttggtgag
    25681 tttgcccgtc agcgccgaca attccggctc ggtcaatcgc aaaaatcacc ggcaggtttt
    25741 gaatagcaac atcgtgaatt aattggtcat aagctcgctg caagaagctg gaataaattg
    25801 cgactaccgg tttgtaacct gcgattgcta agcctgcccc gaaagtcact gcgtgttgtt
    25861 cggcaatcgc cacatcaaaa tattgttcag ggaaacgttt ggaaaattct accattcccg
    25921 agccttcacg cattgccggc gtaatgccga taattttcgg atcacgctct gccatttcac
    25981 atagccaatc gccaaaaata ttggaataag taggtgctgc ttttgatttt ggtaactcgg
    26041 ctgcggtagg gtcaaatttc ggaacgccat ggtagccaat cggatcattt tccgcaggtg
    26101 tgtagccttt gccttttttc gtgcgaatat gcagaaattg agggcctttc agctcacgca
    26161 tattgctcaa ggttttgact aactcgtcaa tattatgtcc atcaatcggg ccgatataat
    26221 taaagcctaa ctcttcaaac aaagtgcttt caggggagaa aatcacccct ttcatatgct
    26281 cttcgctttt tttcataaag tttttgatgg taggcacttt atctaaaatt ttcttactgc
    26341 cgtcacgcac tgaagtatag agcgaaccag aaaaaatgcg ggcaaggtgg ttgtttaatg
    26401 ccccgacatt ttcagagatt gacatttcat tatcatttaa gataaccaac atatcggtat
    26461 gcaatgcacc tgcgtggttt aatgcttcaa atgccattcc ggcagtgatt gcaccatcac
    26521 cgattacaca gacggtttta cggccggcat tttctttttc tgctgccacc gcaatgccaa
    26581 gtccggcact gatcgaagta gaagaatgcc caacgcttaa cacatcgtaa gggctttctt
    26641 cacgccaagg gaaggggtga ataccatctt tttggcggat agtgtgcatt tgatctcggc
    26701 gcccagtaag gattttatgt gggtaagctt gatgaccaac gtcccaaatt aattggtcga
    26761 aaggcgtttg ataaacataa tgcaaagcta ccgtaagctc tactacccct aagccagagg
    26821 ctaaatgtcc gctagtttga ctgactgatt ccaataaata ggctcgcagt tcatcaacta
    26881 cggtttgaag ctggtcttta gaaagtaaac gtaaatcttc cggtgagttg atttcgctta
    26941 acagaggata cttcttttcc ataatgtttt attacccaca accatcaaat aatagatgat
    27001 attaaattaa gctttgagtt cttcggtcaa agtaggctga atgctattta aaatttcttt
    27061 aaccacacgg ccgttaccaa caaccagatt acctgttttc aagtaatctg ttccgccaac
    27121 aaagttagtc acaattgcac cggcttcacg ggcaataagt tcaccggcgg cgaaatccca
    27181 cggttttaag ccgatttcaa agaaaccatc aacacgaccc gctgcaacat aggcaagatc
    27241 taaagcggca gaaccggtac ggcggaaatc agctactccg ttattcatta agccttcaag
    27301 catatttaaa tgtgcatcac gatgtctgat gactttgaaa ggaaaaccgg ttgcaattac
    27361 agtgcctttt aaatcacggc gttctgcatc aatgcgtaaa cggaactcgt ttaatttagc
    27421 cccttcgcca cgcaccgcag tgaaaagctc gttacggata ggatcgtaaa ctacccctac
    27481 tgttgtacgt ccgttttcac gcacggcaat cgacacagca aaatgaggta agcgttttac
    27541 gaaattggtt gtaccatcta atggatcgat cacccattgt acattttcat tgctaccgtt
    27601 taacacgccg gactcttcgg tcacgatcga gtgttcaggg taagatttac ggatcacatc
    27661 aataattgcc gcttccgctg ctttatcgat ttcagtcaca taatcattcg tatttttttg
    27721 taaaacttgt gtatcttgag gcgattgttc atagcctttg gcaataatat tgcctgcttt
    27781 tcgtgccgca cgaatagcaa tgtttaacat tgggttcata tttccaccag attttaaaga
    27841 acataataaa gcacgaatta taaagaatgt agcgaaataa agaaacaaca agcggtctaa
    27901 tctgtgaaaa attttgcaaa aaaatggctt tttctaaccg cttggagttt ggattcgtta
    27961 taatacctcc cattcaagcc acccatttag gtactaaaaa tgcaatttaa agaaaataac
    28021 caacctcgtt ttaaacacag agaagaacgc cgttcagatg agtgttcccc ccgtttttca
    28081 gataaaggca aaatgcgagg aaatgaaggt aaaagtgaca gaccgcataa gctacatttt
    28141 aagcgtgacg aggcttattc acgctctgag cagatttatc cagcagaagg caaaaaagcc
    28201 agtggtgaag gtagtgtgca aatttgggta aaaggtggga atagctcagt taaagagaaa
    28261 aaaaacggcc cgctttcacc gagagcgcct gagaaaatta agaaaaatcg cttggaagag
    28321 atgaaagtct atggcgaaaa tgcctgtatc agtttgttcc aacaacgtcc tgaatctatt
    28381 gtacgtttat gggcaacagt ggagggggca aaaaaattag gcgatttaat gagctatttg
    28441 gctcagcaca aaaaagccta tcacgttatt gaccgtgaag agatggagcg agtcaccggt
    28501 actgaacatc acggcgatat gtgcttattg gtgaaaaaaa cggcttcatt tgtgctagag
    28561 ggctatttac aagtgccgaa aaaacaagat tgcttggtac tgttagatgg tgtaaacaat
    28621 gctcagaatg tggggggaat catcagaacg tgtgcttttt atggtgtgaa aggcattatt
    28681 actgaaaatg tggatagctt aaactccagt gctgcagctc gtgtcgcaga gggtggtttg
    28741 gaatttgtgc gagcgttaga aactaaaaac aagcatattg ctttggtaca actccgccaa
    28801 gccggttatc aaattgtcca cctcacacgc cataagcaag ccccttcttt aaccaaaatt
    28861 aagctggcgg aaaaggtggt ttttgtatta agtgagattc ctgcaagtga tgtggcttac
    28921 gcagaagaca caacaataca gctttccttt aataatccgt taaatagtgg tttaaatgtg
    28981 gcggtaaacg caggtattct acttaatcaa tggtatcaaa cccacattct ttaaggaatt
    29041 gaaatgaatc agcaaaaacc gtttgaagtg attgcgattg ttggcacacc tcgccacgac
    29101 agtgcatttg aaacacatct tgccgtttat aattggttaa aagatcgtga ttatcaaatt
    29161 ttagtggaaa cagaggttgc cactcagtta cagcttaagg aaagctacag tttagatcag
    29221 attgggcagc gcgcagagtt ggtgattgtg ataggtggcg atggtaatat gcttggcatc
    29281 gcccgagctt tggctaaata ccgagtgcca ctgataggca ttaaccgtgg caatctgggt
    29341 tttttaaccg atatcgcacc tcaaacggct tttgaacagc tttatagttg cttagtcaaa
    29401 aatgagtatg tgattgaaga gcgattcctg ttagaggctt tcattgagcg caacggtaaa
    29461 attattgccg caaataatgc cttgaatgaa attgtggttc acccaaccca agtggctcga
    29521 attattgaat ttgaagttta tattgacgga aaattcgctt tttcacaacg tgcagatggc
    29581 ttgattgtgg caacgcctac aggctcaacc gcctattcac tttctgctgg tggcccgatt
    29641 ttaaccccga atatgaatgc aatggcatta gtgccgatgc accctcacac tctttcttct
    29701 cgtcctttgg tggttgatgg cgatagtcaa atttcgcttc gttttgccaa atataatacc
    29761 cctgatttag aagtgatttg tgacgggcag gtgaatatgc actttacgcc tgaagataga
    29821 gtcttggtgc gtaaaagccc ggataaatta cagctgctcc atttaaaaga ttatagctac
    29881 tttactgtat taggttctaa attaggctgg gcaagtaagt tgttttaaac acaagcggtg
    29941 ttttttctga ttaaatttgc aaatgcaata tgaattgatt tcatatacat ttcaaaaata
    30001 tatcattttt attcaataaa aatttgtggt tcaataagct atctgaaaaa taaaggggac
    30061 aataaaatga caacaaattt taaatgccaa gtgcatacta ttgaatttaa tgaagattac
    30121 caaccggagc aaagcacccg tttaaccacc aactttgcca accttgcccg tggcgaaaac
    30181 cgcaaacaga acctgcaaaa tgcgattgcg atgatcaata accgttttaa cgatttagcg
    30241 aactgggata acccgaatgc ggatcgttat tcggtgaaat tggatattgt ctcactggat
    30301 attgatgtgg aaggcaaagg cgagtttttc cctgcgattg agtggctgaa aacctatgtt
    30361 atcgactaca aaaccggcaa aaccattgat ggcattatcg gtaataactt ctcttctttt
    30421 gtgcgtgatt acgatttcag cgtattgttg ttagatcaca ataaagacaa accgcaattt
    30481 agcgtgccgg aaggctatgg cgagttacac ggcaagctgt ttaagcattt attggcatcg
    30541 cctgaatata ccgcaaaata taaaaaacca ccggtgatct gtttaagcgt ggcaaccacc
    30601 cgtacctaca caagaaccac taacgttcac ccaattttag gtgtggaata tctgcaagat
    30661 agttattcat taactgatgc ctattttgcg aaaatgggct taaaagtacg ttactttatg
    30721 ccgccaaaat ccgttgcacc ctatgcgttc tactttgatg agaatgcaga tttactcaat
    30781 gattacacta acttagagct aatcagcacg attgccacaa tggaagcgtt ccaaaaaatt
    30841 taccgtccgg aaatttacaa tgccaattcg gtcgcagggc aggtctataa aggcagcctg
    30901 acttaccaag attattccgt caccaaagtg gaatatgacc gtgaagaacg cacccagttg
    30961 gcgatcaaac agggtaaata caccgaagag cattttatta aacgttacca agcgatttta
    31021 gaggcttggg cgacggagga ataaacgtag ggtgggcgta agcccaccat aaaatgagat
    31081 ataaccaatg gtgggcttac gcccacccta ctttttatag gaaaattcaa aatgagcaac
    31141 attcttctcc caacctctac cgccggcagc ctaccaaaac cttcgtggct tgccgagccg
    31201 gaaaaactgt ggtcaccttg gaaatttgaa ggcgaggaac tacttcaagc caaacgtgat
    31261 gccctccttg tttcccttgc cgaacaaatt gcggcaggga ttgatattgt tagtgatggc
    31321 gaacagaccc gccagcactt tgtgaccacc tttatcgagc atttggaagg ggtggatttt
    31381 agcaagcgtg aaatcgtgcg cattcgtaac cgttacgatg ccagcgtgcc gagcgtggtg
    31441 ggggcagttt cccgcccgaa atcggtgttt gtggacgatg ccaaattctt gcgtgcgcat
    31501 accgacaaac caatcaaatg ggcattaccc ggcccgatga caatgatcga cactctctat
    31561 gacggtcatt acaaaagccg tgaaaaattg gcgtgggaat ttgccaaaat tctcaacgaa
    31621 gaagccaaag agttggaagc ggcaggggtg gatattattc aatttgacga accggcattt
    31681 aacgtcttct tcgatgagct gaacgactgg ggcgtggcgg cgttagagcg tgcggcggaa
    31741 ggcttaaaat gcgaaacggc ggtgcatatc tgctacggct acggcattaa agccaatacc
    31801 gactggaaac agaccctcgg caacgaatgg cgtcaatacg aagagagttt cccgaaactg
    31861 caacaatcaa aaatcgacat tatctcgtta gagtgccaaa actcccgtgt gccaatggac
    31921 ttaatcgaat tagtgcgtgg caaaaaagta atgctgggag cgattgatgt ggctaccaac
    31981 attatcgaaa caccggaaca agtggcagat acgttacgca aagcattaca atttgtcgat
    32041 gcggataaac tttatccaag caccaactgc ggaatggcac cactttcacg ccaagtcgca
    32101 caaggtaaat tacaggcact cagccaaggg gcagcgatat tgcgtgcgga attcgcaaaa
    32161 taattttgcg atctgcatcg aaaatatcaa ctttgctttt tgctcgtttc cagattttct
    32221 tccaaaataa caggaaatga cggaggcact atgctaaatc tatttaaaaa gccaattaag
    32281 aaaagctcct ttgaggcttg ggcaaaacta atggacgatg tggcaaaagt tgcaatttta
    32341 gcaattcctg ttattctcta tggagaatat tcactgctaa tgaaatttac acactcaatt
    32401 accttatttg cagtagttta ttttttgtta gcaacggcaa gattgtttcg agaaacagca
    32461 gaggagatgt aaatggacgg attgacaatc ggattatttc ttttgcttgc attttcattt
    32521 gctgcatacc aatgggcaaa gcatttaaaa gatcataatc attaattcaa tgaataatac
    32581 taagcggtca tatttggtaa attttttaca aaatgtgacc gcttgttttt ctttcactcg
    32641 aagttaattt ttatataaat aatactatct atgaaactaa aaaatgcgta aaataacgtg
    32701 aaatcaactt acgcaaacgt ttacttaagc ttattaggag tccaaaaatg ttaaaacgtg
    32761 atatgaatat cgctgattac gatgcagtat tatggcaagc cattcaagat gaagatcgcc
    32821 gtcaagaaga acatattgaa ttaattgcat ctgaaaacta tgcaagccca cgtgtaatgc
    32881 aggctcaagg ctcacaatta accaataaat atgcagaagg ttatccgggt aaacgttact
    32941 atgggggttg tgagtatgtg gatattgtag aacaacttgc gattgaccgt gcgaaagcat
    33001 tgttcggggc agattatgcc aacgttcaac cgcattcagg ctcacaagcg aatgcagccg
    33061 tatatatggc gttgcttaat ccgggtgaca ctattttagg tatgagttta gcgcacggcg
    33121 ggcatttaac ccacggtgct tcagttagct tctctggtaa aatttataaa gcagaacaat
    33181 acggcattac tgatgaaggc ttaattgatt atgaagcatt acgcaaacaa gcccaagaag
    33241 tgaaaccgaa aatgattgtt gctggtttct ctgcttattc tcaagttatg gattgggcaa
    33301 aaatgcgtga gattgccgat gaagttgggg catatttatt tgtggatatg gctcacgttg
    33361 caggcttaat tgcggcggga gtttatccaa atccgcttcc tcacgctcac gtcgtgacga
    33421 caacaaccca taaaacctta gccggccctc gaggtggttt gattttatct gcatctggcg
    33481 atgaagaaat gtataagaaa ctgcaatctg ccgtattccc tgctggtcaa ggtggaccat
    33541 tgatgcacgt tattgcggca aaagcggttt gttttaaaga agctttagag ccggaattta
    33601 aggcatatca gcaacaagtt gtaaaaaatg caaaagcaat ggttgaggta tttaagcaac
    33661 gtggttttga tgtggtttca aacggtacgg aaaaccattt attccttgtt agctttgtaa
    33721 aacaaggttt aaccggcaaa gcggcagatg ctgcattagg agctgcgaac attaccgtga
    33781 ataaaaactc ggtgccgaac gaccctcaaa aaccattcgt gacttcaggt attcgtgtgg
    33841 gtacgccttc tgtgacccgc cgtggtttta aagaagcaga ggtgacagca ttagccggct
    33901 ggatgtgcga tgtgctagat agcattggta aggataatca cgaacaggtg attgcagaga
    33961 ctaaagcgaa agttttagac atttgtaaac gtttaccagt gtacgcataa tctcaacttt
    34021 acactttttc aagcggtaat attttttaga aatattaccg ctttttgttt tatcaatcat
    34081 tttctttatc tgttttctga aaatggattg atttttcttt ttttacataa cataatgata
    34141 ataattctca ttaatttatt ttttgttatg ttacctcgta tttcctcttt tttagctagc
    34201 ctttttatgg ctttttttct tttaggctgc tcggtttcaa cgcaatccct taatgaacaa
    34261 aacgtggact ctatcggcca aattattgat ctgaatacca atcaaacgat ttcatttact
    34321 gaactacttt cccgtctatc ttctcaagat tacgttttag ttggtgagga gcatactcag
    34381 ttaattcacc accaaattga attgtattta tttaatcaac ttacgaagaa agccaagtta
    34441 catttaattg cgttggagat gttaaatgtg gatcagcagc ctgcgattga tcgcattcag
    34501 tttaaccgac cggttaattt atcagccacg gatttaagag aggcaattca atggcaaaaa
    34561 tgggattgga agatgtatca agatttagtg gtagagagct taggttcaaa tagtcgtgtt
    34621 atagccacta acttaacaga taaagaggtt gaaattttat taaatggggc ggagccatta
    34681 aaaggttctg tatccacttc ctctgaagtt aagcaaaaga tcgcacaact gttgctgtca
    34741 atgaatcacg gaatgcctta cccgatggaa aatatggtgg cagtacaaca attccgtgat
    34801 cgcagaatgg cagaaaaatt agtaaaaaat gcgttatcga ctagcttgct gattgcaggt
    34861 aaccaccacg ttcgcaaaga tcttggcgtt ccgttgcata ttgcggaata tgaccgaaca
    34921 aaaaaagtag cggtgctaat gcttaaaaca gagagagaag aaattacttc ttcacaggca
    34981 gattatcttt gggtcactca ataaggagaa ttatgaaatt taatataatc acacgcattt
    35041 tgtttccggt tttgtgtatg ggaggatcgc aaactgcatt ggcagaggaa aaggcgaaaa
    35101 atattgcgga gcttgatact gtgacggttt atggcactgt ggaaaaccct aattttgaga
    35161 atttcagtaa agccggctcg gtgagttctc gagcaatgaa tgtgaatgca atgcaaagtt
    35221 tagatagtat tgtccgttct gtcgcaggtg gctataccca aattgacccg gggcaagggg
    35281 gcgtgagtgt gaatattcgt aatatgagtg gtcttggtcg ggtaaatacc ttagttgatg
    35341 gcgtgccaca aacacagctt ggtacatcag caaacggagg tggtaagttc cacactgatg
    35401 gtaacgggcc aatgagccaa ttcagcactt taattgatca aaatttttta acccgagttg
    35461 atattgcgaa aggctacaac aatggtgcag ccggattgaa tgctttagcc ggtagtgcta
    35521 attttaaaac gattgatgtc gaagatattc tactagaaca acataaagtc ggcgtattaa
    35581 gccgttttaa ttatggcaat aatgatctgg gaaaaaacgg aatgcttgca ctagccggaa
    35641 aagttgatgt gctggaaagt ggttctcttg gcagtttatt ggcttttagc aaaagtagta
    35701 tcagtcaaaa ttatcgccga ggtaatggca caatggcaac ggattctgct tatatgcaag
    35761 ggttaaaaaa tcaccctgaa tcttatatgg gaaaaattgc ctttaagcca aatcaagatt
    35821 cagagtttaa attgtccgga cgtcaatata aaaatagctt agtggggcgt aatattgata
    35881 gtgtgaccta ttccttagaa tccagttacc agcctcaatc tgattggatt gatctgaaat
    35941 tcctaacagc agtaacagaa actaagcaag atttccacga tgatgcaaaa ctatggacat
    36001 tagaagatgc ctcaaccaaa aacaaaatgt ggatgtttga tttgaataac accagccgtt
    36061 ttgagtcagg gaaataaata ttcccgtgat ttaccggaaa gtaagaataa tgatggagcg
    36121 attagcaatg ccgcttttgg gccggcaggt aagcaaaata ttgattccct ttacctagac
    36181 accgaatgga aatacggcat tgtcacttta aattcaagtc ttcactattc acgctatcag
    36241 ttaaaaggat ataagccaga atgcgatagc gatgatatgg attattgttt cccttctttt
    36301 gggtttgatg ttaataaaaa acattataag ttgaatcctt ctgccacttt agcatttcag
    36361 gttgctgatt ggtttcaacc ttttgtcagt tacaaacaaa cctcccgttc gcctaatgtg
    36421 caagaaatgt ttaataccag tcgaaatggc ttgagtgtga acccgttttt gaaaccagaa
    36481 agtgcgaaaa cctatgagat tgggtttaat attcatcaag ataatgtatt actcaataat
    36541 gatatcttgg ggctaaaagc ggtatatttt aactcacgca ttaaagacta tttgtataac
    36601 ctctcgttgt atggttgtgg gccaacagta tgtcgaaatt caagtgatgc taccaatgct
    36661 atacagttcc aaatttatgt gaatcaccct gaaaaggtta aaaatcgagg ttgggaagtt
    36721 gagctggctt acgattccga tgcttttttt gtcaatggta gttatacccg aactgaaagc
    36781 acagcaccca cttcaaaagg tgcgactatt ctttatggat ttggcactga agcttatacc
    36841 cagctaccaa aagattatgc gactttggag ctaggggcta aattgctgga taaaaaatta
    36901 acactgtcta gcatttttaa atatacaggc aaagcgaaac gtgtcggtat tgatttagac
    36961 gaagatggca acattattca cgagcagtta ccgaatattc cggtgattat cgatttatat
    37021 gcaaattaca aagtgaataa acatttaacc ttaaaagccg gggtacaaaa tgtgatgaac
    37081 cgaaattatc ttgatgcctt aaatgcgtat aactcttcca ccgcagaaga gtatgactat
    37141 gatacagaca cctatcgttt cacaaatagt gccagaggtc gaacttacac actaggggca
    37201 gaggtgcgtt tctagcttga aagtggctta ttttaaccaa tacgcccttt ttctttcctg
    37261 tactgatgtt gagattcaag gcataatatc cagaacgatg aatattcagc cggtgtgtaa
    37321 tatgaaaaaa tttgtggttt taatttcagg gaatggttct aacctacaag caatgattga
    37381 tgcgcaaaaa tctgcggata caagcggtca aatttgcggt gtaatttgca ataaggcaga
    37441 tgcctatggg ctgattcgag ctaaacaggc gggaatcccg acatttgtat tttctcgtaa
    37501 agattaccaa agcaatgtgg aaatggatct tgcgattgcc gaacaaattg agcagttagg
    37561 agctgagtta attgtattag ccggctatat gaaaatttta acgcctgaat ttacgcaaca
    37621 ttttgctggc aaaatactca atattcaccc ttccttatta cctaaatacc cagggctaaa
    37681 cacttatcaa agagcgatag aggctgggga aagtgaacac ggcacgacta ttcatttcgt
    37741 gaatgaagaa gtggatgctg gtgcggtggt attacaagct aaagtgccga tttatcctga
    37801 agatgagatt gaagatgtaa tggctcgagt ggttgagcaa gaacatcgat attatccgtt
    37861 ggtgattgag tggttctgtt cgggtagatt agtttctcag cacggcaaag cgtatttaga
    37921 cggtaaacta ctgcctgctt gtggatatgc agaagattaa acgatagggt gcatcgcacc
    37981 ctaactttca gctaatgcag ggcaaagata atattgcccg ctgtgagggc aatagcgaca
    38041 gcccattttc atttcataca gctcatctaa taaacaactt tctgcaatgg ctttagcgga
    38101 catttcagca aatttttctc cattttttag cattaagata tgatcggctt gatttattgc
    38161 caatgcagga tcgtgcaaaa tcgcaatgat agttaagcct tgttgtttca gcttttgtag
    38221 taaggaaaaa agctgatatt ggtgatgaat atccaaatgg ttggtgggtt catcaagcaa
    38281 aagccagctt ccgcttaaat cggcattcgg ttcaggaacg agttgagcca gcactcgagc
    38341 aatatgcgct cgatgttgtt ctccaccgga aagttgtatg ctacttcttt cttttaatgc
    38401 ggttaaagac attgtttcca tagcccaagc ggttattttt tcattaaatt ttgcaaattc
    38461 actttggcga tatggctctc ttccgagttg taccaattct tctactttta agggaaaggc
    38521 aatttggctc tgttggctga gcattgcccg tttttgagcc agagcatatc cgtttaagtc
    38581 tgttaagcgt tgatgttgat aaaatacggc actgttagtt tgtgcattat taccgcttaa
    38641 ggctttgagc aaggttgttt tgccggctcc gtttggaccg atgatggcgg taaattttcc
    38701 ttgttcaaag gcaatttctt gaatctccag caactttttt tgttgatgaa cgatgcttaa
    38761 attttggcaa gttaataaat tgctcattag atatgtttcc cacttttcca taccattact
    38821 gcaaggaatg gcgcaccaaa taaggcggta aaaataccaa tcgggatttc tgccggggcg
    38881 gctagggttc tggcaagagt atctgcaatc attaataaga ttgcaccgca aaccaaacta
    38941 ttgagtaata aatggcggtg gttactgcct cccagtaaac gcattaaatg tggaataacc
    39001 agcccgacaa agccgatagc cccaacacag gcaacgcttg tgccggttaa taaggcaacg
    39061 taaaacacaa gacgacgttt gacttttgca atgtcaaaac caatgtattg tgcatcttct
    39121 tcacctaatg ttaaggcgtt taacgcacgg tgttcccgcc aaataagtgg gctacaaatg
    39181 aagacaaccg cagccatcat tgccaccatt tgccaattca tacctgctaa agatcccata
    39241 ctccaaaagg ttaaactacg aagttggtta tcatcggcaa cataaatcag tatgccggtt
    39301 aaagcgccac taaatgcagc tagagcaata ccaattaata gcataatggc gatatgtagt
    39361 tgcccgttac gttgagaaag taaatagagc ataaaagtca ccagccagcc ccctaaaaag
    39421 gcggcaatag gtagagcata atagctgatt gattccggca gtagtggctg aatcaccaca
    39481 atatataatg ccgcagccaa tgcagcacct gaagagacac caataatccc cggatctact
    39541 aacggattgc gaaacagccc ttgcattgtt gctccgctaa tagcgagggc tgccccgatg
    39601 aataatgccc ctagtaatcg aggcaggcgg atttgccata aaatataggc tgcactttcg
    39661 cattcagcgt tgttgcagtg ccaagcggat aggggtaatg acatcgcccc taaatgggta
    39721 caaatcacta agctgataat taaagtgaaa attaaggtta aatgcagttt caaagcgtat
    39781 ccgttatttt aaacaaggtt gaatagtggt gagaatttgg tgtgcatatt gagcagtgta
    39841 aggcccaaag cccaaggcat ctaaaatatt gattgcaaaa acacagcctt ttttgcccgc
    39901 ttgtgtattt gtgagttggg cgtattgtgg gctggattct gctaatttac tgatcgttgc
    39961 agattctttt gcctgattac gggaggctaa taaaataaca tcggcattgc ttgcagctaa
    40021 agcctcattg gcgagtggct tattgccctc agcattgaaa ctattgttta gatttaacaa
    40081 ggttaagaaa tgatcaccca cactcttttt ccctagccca aagatacctt gcgatgcagt
    40141 gtcaatcagc actaagactt ctttgtcagt agaatgttgg ctacgaatgt cggctaattt
    40201 tttttcatct gccagaatgg tttctgttaa ttgttttgcc tctgattctg caccaatcgc
    40261 cttggcaatt tgctgaatat cctcacgaat ccctgctaag ctcggtttct ctcctaagtg
    40321 aagtaatgga ataccgctgg ctttaatttg ctcaataact gcgttagggc cggcatcagg
    40381 ggctaaaata atcaaatctg gggttaaaga gagaatacct tcagcagaaa gctggcgacg
    40441 ataaccgatt ttaggttttt tctccattat cgtttgaggt ttaactgaag tggtatccac
    40501 accgactaac ttatcagctt ttcctagtgc tgcgacaatt tcggaagcat agcccgcagt
    40561 tgaaacaatt ttttctgccg cctttgtggt atttaaacac attgataggg caatgaaaga
    40621 aaaaagtaag gttctcattt tatactccat ttgattttta tctaaactta aataataatt
    40681 attattattt caattttcaa ttaaaatgat atagtgttaa cattaaacgg attaaactaa
    40741 ctagaggatc taaaatatgc aaataaagca aactgtatta gcaatagcga ttactccctt
    40801 tatttctcaa ctctccttag ctcaagaaac aaagattagt agcattgaac tagatactat
    40861 tgaagtaaat gagcagcagg agaacctact taaacagcaa gcggtgatga gcaatgaaga
    40921 tttagtacgt tatagtactg atatgggcgt tccgcaaaca ggccgctttg gcccacaagg
    40981 gtttaatatc cgtggtgttg aaggtaatca agtggcagta acagttgatg gcatatcgca
    41041 agcagcatca aataactatg ccacctttag tcgctatagt tactacaata aatctcgccc
    41101 tgaaatcgat actgaattaa tgagcgatgt aaccattgaa aaaggctcaa gcacaaaagt
    41161 aggcaatggg gcattaggcg gctctgtgaa ctataaaact aaaaccgtaa gtgatatttt
    41221 aatgaaaggt cgccaatttg gtgggatgtt gaaatatacc tataacggtc aaaataaaga
    41281 gaatattgag acggcaggta ttgctgcgga tggtcaatat gcggatgctt tggttatgta
    41341 tagccaccgt caaggacacg aaacacaaac aacgtctaaa ggtccggata ttatgggaag
    41401 tggtcgtggt ttaccaaatc cttacaaaaa taatcaatac agctacttgg caaaattagg
    41461 gctaaaatgg aatgatgaaa atcgccttga attaaaaact tctaagcaac gcagtaaaaa
    41521 cgccggtcaa gagctttctt attctaccgt cacattacgt gattttttgg atgtgcagga
    41581 aattgaaact tatggcgtta cttatttata cactccaaaa aacagtattc ttgaaaatat
    41641 taaagttgcg gtaaccaaac aggatactga aatttcaggt attaacgatc aaatcactat
    41701 tgcccgtggt acaaaaacag ataataccaa acgggctttt aatactaaaa atgttgaagg
    41761 tagcttaggt gttacattca agcctgttga tctaggtaat accgaacata aattgtcaac
    41821 ggaattaggc tatggtgtat ctgatttcag ttttgatatg caaacctata cagcaggtat
    41881 tacgccaacc gatcaaaata tgcagtctcc ggcaaaaacc aagtctttcc atattttgat
    41941 gggagactct attttactga cacaaaatct atctgctcat ttaaatgctc gattgagcag
    42001 tcagaaatta cattctgatg ataatagttt gtcagataaa acctttaaca attgggcggg
    42061 agatattggt ttaaattatc agctctctcc tgtatggcaa attggctata aactcagccg
    42121 tggttttaga acacctaccg caagtgaaat gttctttaac cgtgaagttc aagggcgtgg
    42181 agcaagccaa actttcttag caaatactaa cttaaaaccg gaaacaagct taggtaatga
    42241 aatttcactg gtaggtaatg gttcattagg tagcttgagc gtagccgctt accataccca
    42301 ctatagaaat ctgattgatc ttgccactat tggtaacaat atttaccaat cgcaaaatgt
    42361 taaccgagct aaaatcaaag gtgttgatat taacggaact ttagacttaa acacagcgtg
    42421 gaatgcaatt ccacaaggct ttgagcttaa tggtggattt ggttatgctc gtggcaaacg
    42481 taatgatggt accgacttac tcacggttca accgttaaaa gcattgttcg gcataggtta
    42541 tcgagctgtg aacaatgact gggcgataca cctaaacggc acatacacac aaggcaaaaa
    42601 agcaaaatat gcacaacagt atgctatttt agccaatact gggtatttaa gttacgataa
    42661 atcattaacc acttacccat acttaagtaa ttcagccacc gtatttgact tagttgcaca
    42721 caaaaagttt ggagaaagag cgattgttaa agttggggtt tataatctct ttaataaaaa
    42781 atattggact tgggatagtt taagaactat tggtataact agtcctggag ttgccaacag
    42841 tataactggc gaaggcttaa atcgttacct tgctccagag cgctatgtaa tggcatcagt
    42901 ggagtttaaa ttttagagat aagcattaaa tgtaagagtt aatttttacg tacttatttc
    42961 tttatagtaa taaacaagcg gttaattttg gcccattttt tgtaaaaaat taaacaaatt
    43021 taaccgcttg tttctggata gtagataaaa acaaaatgct ttcctatctg caataaacag
    43081 ctattaaaaa gccacttatc agagcggact cattttactt tttatctatt tttgaggtgt
    43141 gcaaccttta tataaaattt cacttgcggg gctttggata tttactgatg ctttacggtg
    43201 gttggtaaat tccattggat caccgtaaag gctgaaattg ttttcgtcac caaagttagt
    43261 gccggttgca tctgtcgtgt ataggttgat cggcataaaa cgttttttac cgcttaattt
    43321 tgcctcagca taggttggaa tgccttgttt attgaagccg tatttcacgc ttaatttttt
    43381 gccgttttgg cagctatact taacagttga ggtttttacg gtgctttcgt gggcttctct
    43441 tgcatcactt tgttcacctg ctgcatgggc taaattgctt acaatcatgg cagttgttgc
    43501 gaatatcatc aattttttca tatattttcc tttaaataag cgttatctta gttcagataa
    43561 cgtattgttt agaaagtgag ttttatataa agttccatat tttttcaaaa aattgaaata
    43621 aaatatcaaa attacaatgt tttgctagca taaaatgaca aggtcttgtt ttttggtaga
    43681 ataagacctt gtggaagggg ttacaaatta gaggctaaaa tcaaccgctt ggtgtattct
    43741 tgttgtggat tttcaaaaat ttgagtgaca tcaccgcttt ctacaatctc accttggctc
    43801 attacaatca ctcggtcgct aagtgccttg atgaccgcca aatcgtggct gatgaaaata
    43861 taacttaagc cgtatttttt ctgtaagcgg ttaagcaatt caattacagt gatctgagta
    43921 gagcggtcaa gtgctgaggt tggctcatca agcaatacaa atttcggctc taaaatgatt
    43981 gcccttgcaa tcgcaatccg ctggcgttgt ccgcccgaaa attcgtgcgg atagcggtta
    44041 atcattgcag ggttgagatt aacctcttcc aacattttca ttactttttc ccgccgttcg
    44101 gttttgctca tttgagggca atgtacggtt aagccctcag caataatttc cccaactgtt
    44161 aagcgaggag aaagtgagtt gaacgggtct tggaacacca tttgcatatc ttttttcagg
    44221 gcttgacgtt cggctttatt cagattagcc agtgtcttac ctgcaaatgt aatattgccg
    44281 cgataatcta aaatctgcat aatggcacgc ccaagggtag atttcccgga gccggattcg
    44341 cctacaatgc cgagcgtttc gccggttttc aagtgcaatg aaatatcttt taacgcatta
    44401 aacacctttt tcggcttacc gaatagcgag cgttttaaaa tataatctac cttaatatgc
    44461 tcaccctgaa gcaaggttgg tgcatttggc ggtaattccc cttttaaatt agttggaatc
    44521 ggggtaagta gctccaccgt ataaggatgt tgcggattgg tgaacacagt ttccgtttcg
    44581 cctcgctcaa taatttcgcc gttttgcatt acgcagacta agtcactgta tttatgcacc
    44641 aagcgtaaat cgtgggaaat taagataatc gccattccca tatcacgctg taagtcgtgc
    44701 attaaatcca aaatttccgc ttgggttgtg acatccaggg cggtggtcgg ctcatcggca
    44761 atcaataaat cgggtttgtt gataattgcc attgcaatca taattcgttg tagctgaccg
    44821 ccggaaaact cgtgcggata gcaaatcatt ttcttttccg catcgggaat ttttactttt
    44881 tgcaaagttt ccaacaccat tttttccgct tcggcattgc tgatttgcgg attatgggtt
    44941 tgaaccgtct cagcaacctg cttgccaatc ggcatataag gattgagtga ggtcattggc
    45001 tcttggaaaa tcataccgat gcgatcacct cgaactgttt gcattgcttt ttcagataga
    45061 gtaagcaagt tttgttcttc aaaaatgatg cttgagcgtt caccgaatga gacgatattt
    45121 ttaggcaata actgcataat tgccattgaa gtaacggatt tacccgaacc cgattccccc
    45181 acaatcgcaa gggtttgccc tttttcaatc gagaacgaga cattacgcac tgcgtgaact
    45241 aattcttcgt ccgtttttaa ataaacatcg agattattta ctgctaataa ttccattcta
    45301 aacctctatt tatcttttgg atcgagggca tcacgcaagc catcaccaat aaaattaaaa
    45361 caaaacagtg ttaaacataa gaaaaaggca gggaaagcca gtagccaagg cgaggtttcc
    45421 atttgtgccg ctccgtcgct taataatgcc ccccaactgc tcatcggctc ttgtgtacca
    45481 agccctaaga aacttaagaa cgattcaaac aaaatcagag atggtacttc aagggaggca
    45541 taaaccacca ctaagcctaa aacgttaggc acaatgtgtc gccaaataat ttgacggcgg
    45601 gaaacgccac acacaatcgc tgcttccaca aactctttat ttttaagcga aagagtttga
    45661 ccacgtacaa tacgggcaag gttcagccac gctaccatac cgattgcaat gaaaatcagg
    45721 aaaatattct gcccgaagaa cgtaaccagc aaaattacga agaacataaa tgggaatgag
    45781 cttaaaattt ccagaaaacg catcatcacc atatcgactt taccgccgaa ataaccggaa
    45841 attgctccat agattgtacc gataagcacc gcaattaatg caccggcaat ccctaccatt
    45901 aacgaaatgc gtccaccgat tgcaactcga accagcaaat cacgccctga agaatcagta
    45961 ccgaaatagt gttgagattc aaaatccgga gcaatcccca tcatattcca atcggtatct
    46021 tcatagctaa acggcattag cattggggca aaggtaataa aaagaataat acaacaaaga
    46081 ataatcaaac ttgccacagc cgccttattt cggaaaaaac ggcggcgtgc atcttgccat
    46141 aaacttcgtc cttgaatggt tgaggtaacc tcaacaagcg gttgattttt tgaagaattt
    46201 tgcattttcc gctttactcc tatgaataac gaattttcgg gtcgatgacc gcatataaaa
    46261 tatcaacaat cgcattaaat aaaatggtga gcgtacctac caaaatggtt aggcttaata
    46321 ctaatgaata gtcacgattt aatgctccgt ttacgaacaa ctgcccgatt cccggtaagc
    46381 caaacacgct ttcaattacc atcgagccgg taataatgcc aacaaaagcc gggcctaaat
    46441 aagtgatcac aggcaacaat gccggacgca aagcgtgttt gaaaataatt ttacgcattg
    46501 gcaagccttt tgccttagcg gtgcgaataa aattagagtg caacacctca atcattgaac
    46561 cacgagtaat acgggcaatg ccggcaacat agctaatggt taaagagaga acaggtaaaa
    46621 ccatatagta gagctgacca ccgttccaac caccggcagg caaccatttg agataaatcg
    46681 caaacatgag taccaacagc ggagcaaaga caaagctcgg cataataata cccgtcattg
    46741 aaaagcccat cactaaataa tcccatttac tattttgctt aagtgcagcg atagttcctg
    46801 cggttaaacc gataagcacc gcaaaaataa aggcagtaat gcccagtttt atcgaaacag
    46861 gaaacgcaga agcaatcaga ttatttaccg attgatcttt atatttaaaa gatggaccga
    46921 aatcgccttt tgacagattt tccatataaa gaaaatactg cttatacagc ggttcattca
    46981 ggtgatattt tgcctcgata tttgccatta ctttcggcgg ataggctttc tcactggtaa
    47041 atgggctacc cggggcaagc cgcatcagga aaaaggaaaa ggtaatcaga attagtaggg
    47101 ttggaatcgc ctcaagaaga cgtttaaaaa taaacttcag cataagcacc actcttttta
    47161 gttatattgg taggcaatta atagcgtaaa ttaacggctt tgtaaagata ttgattagtt
    47221 atggctattt ttataagaat tcattattct taagcggttg tttttttagc ttatttttgt
    47281 aaaaaaatcg gcactttaat actctttaaa gtgctgattt atgtatacga tttttagtga
    47341 tttttagact tttttcttca ctactaactg gcttaatacc actaatgtta atgagaaaat
    47401 aatcataata gttgctagtg cattcacttc aggtgttaca cctgttttaa ccaatgagaa
    47461 aattttcagt ggtaaaactt cgtagcttgg gcttgtcacg aaagatgaaa caataacgtc
    47521 atctaacgaa atcgtaaagc ttaacaacca gcctgaaata atcgaaggta atgccagtgg
    47581 taaaataatt ttacgcaaaa tagtcacttc acttgcacct aggtcttttg cagcttctag
    47641 cattttgccg tcaaaatcgc tgaggcgtga ggaaattgca attaccacat aaggcaaaca
    47701 gaaagtaatg tgtgcaatta atagcgaaat aaagcctagc ttgataccta agatcataaa
    47761 taatacgagc atagataccg ccattacgat atcaggcgac atcattacca cgaataacat
    47821 tccgcccact agctttttac cacggaaacg gtaacggtaa agcgcaatag aggttaatgc
    47881 ccctaaaatg gttgagaatg ttgccgcaaa gaacgcaata gttaatgagt tcaatgttgc
    47941 ttgtacaagc gtatcattac tgaataaacg ctcataccaa ttccaagtaa agcctttcca
    48001 atttaatcca aagcggtctt cattaaagga gttgatcact aaaatgataa ttggaatata
    48061 gagatatgca aaaacaacca acataaaaag gtttctaaac atctttttca ttattcaagc
    48121 tccacctttt tatttaataa tttgtttgca cgatagtaaa cataaagcat taatgccatt
    48181 aagatagtta atgcaatact tactgctgaa cctaatgcaa attggttggt atttaagaac
    48241 aagctcttaa taatgttacc tactaacggt gttttaccgc cgcctaataa atctgccaca
    48301 tagaacatac ccattgccgg aagtaatact aataaacaac ctgcgacaat gcccggcatt
    48361 gttaatggaa tagtcacttt aataaaacgc tggaaggcgt ttgcacctaa gtcttttgca
    48421 gcttctagta agcggttatc aattttctcg attgatgaat aaagcggtag aatcataaaa
    48481 ggtaatagaa tgtaaactaa accaataata atcgcaattt ctgagtttaa taaacgcatt
    48541 ggctcgctga ttatacctaa agccatcaag ctttcattta aaaagccttt tacgcctaag
    48601 aaaatcttaa tgccataaat acgaatcagt gagttagtcc aaaacggtag aactactaaa
    48661 aacagtaaaa acggacgaat tctttccggc attttggcaa taaaaaatgc aaagggatag
    48721 ccgatgatca aacagaaaaa ggtggcaatg cccgccatat atagcgagtt ccacaatact
    48781 gctgcatagg tgtcattaaa cagtgattta taagcatcaa aactaaatgc aaagtccaca
    48841 aaatactgac tttgacggtt ttctgttaag aagctgatga ttaaaacgag tacgttcggc
    48901 actaatacga aaagtaataa ccaaccgaaa atagttgcga ccgcaccatt ttggaatttg
    48961 ttattcgcct tcatcgttta acacaacctc ccagccttca taccaagtaa gagcaacttt
    49021 ttgtcccact tcgtggtcaa tgttcggatc gtcttcattg aagaactcgc taaccaatac
    49081 attcataccg ttatgatcta atctcacgct agactctaat gtcatacctt tgtagttacg
    49141 gtcgataata tgaccgataa ttgctttcga gctttcgttt tcgtctaact cctcaatcac
    49201 aatatcttca gggcgtaaca atacttttaa tttttggttc ggctgaacct ctaaatcttc
    49261 cactttgata ttgcaaatgc gaccttctac gtttgctttt acattagttg catcaacacg
    49321 ctcaattaca gttgcatcaa aaacgttaat ttcgccgatg aaacgagcta caaataagtt
    49381 acttggctct tcgtaaatct cacgtggtgt accgtcttga gcgattttac cagcgttcat
    49441 tacgataata cgatcagaca tggttaaggc ttcttcctga tcgtgggtca caaaaataaa
    49501 ggtaatgcct aattgacgtt gcaatgcttt taattcattt tgcatctctt tacgcaattt
    49561 ataatctaac gcagaaagcg attcgtctaa caacaatact ttcggtttat ttaccaccgc
    49621 acgggcaatt gcaatacgtt gttgctgacc accggaaagc tgagccggtt tttgttgagc
    49681 gcggtcttct aaacgcacca ttcgtaatgc ttccatcaca cgtggctcaa tttcagcatt
    49741 tggcactttt tgcatacgca gcccgaaagc cacgttttca aaaatcgtca tatgtgggaa
    49801 aagggcatag ctttggaata cggtgtttac cgggcgttgc tccgccggaa cgttagaaac
    49861 atcttgccca tcaagaataa ttgaaccttc agttaaatct tcaaaaccgg caattaaacg
    49921 taacgcagtt gttttaccac aaccggaagg gcctaaaatt gttaaaaatt caccatcgtt
    49981 aatggttaaa tttaaatttt taagaatcgt tttactaccg tagctttttg ttacattttt
    50041 aagctcaatg atagctttct gttctacttt ttccatctac tgtttttttc ccttaaatta
    50101 aaaagaaaag gagttataaa atcaggcatt tgcccctaaa aaatcaactt ataatgatat
    50161 agctaaaggg gcaagattga aaggaaaaat ttgcgttttg gggatttttc tctgatgaac
    50221 aagcggtcgg attttcaaag ttttttgcaa attttcctga aaattcgacc gcttgttttc
    50281 tttccgttaa aatagttgtc aaaattactt ttgaatagat tcaatgaaac tcaattctca
    50341 acaacaacaa gcagtagaat ataccaaagg ggcttgcctt gtgctggctg gtgccggctc
    50401 gggtaagact cgggtgatta ttaataaaat cgcacattta attgcacatt gtggctattc
    50461 gcctaagcag attgcagcag taacctttac caacaaagct gctcgggaaa tgcgtgaacg
    50521 ggtggatcat tctatcggca aagaaaacag caaaggttta accatttcga cttttcacac
    50581 acttgggttt gaaattttaa aacgcgaata taaattgctc ggttttaaat cgggtatgac
    50641 cttgtttgat gagcaggatc aaattgcttt gctgaaacat ttattgcctg aaaatgtgac
    50701 ggaagataag gatctgctga aagccttaat tgccactatt tctaactgga aaaacgattt
    50761 gctttcgcct gaaagggtac ttactcgtgt gcgtgatgaa cgtgagcgag tgttttcaca
    50821 tttttatcag ctctaccaga atcaacttaa ggcttataat gcgttggatt ttgatgattt
    50881 gattatgttg ccggtgttgc tgttccgcca atttcccgaa gcaaaatctc gttggcaaca
    50941 gaaaattcgc tatttgttag ttgatgaata tcaagacacc aacaccagcc aatatgagtt
    51001 aattaagctg attgtcggca acgagccaaa ctttacggtc gtgggcgatg atgaccaatc
    51061 aatttactct tggcgtgggg cgaagcctga aaatatgcaa cggttacggg aagattttga
    51121 tttgcaagtg attaaacttg agcaaaatta ccgttccagc cagcggattc tgcattgtgc
    51181 caatattctg attgataata acgatcactt gtttagcaag cggctgtttt cagaactggg
    51241 gcaaggggaa aaattacagg tcattgaggc aaaaaatgag gaacacgaag cggaacgcat
    51301 tgtgggcgag ctgattgccc atcgtttctc gaaaaagacc aaatacaaag attatgcaat
    51361 tttgtatcga ggcaaccatc aatcccgctt gttggaaaaa ttgctaatgc aaaaccgcat
    51421 tccgtataaa atttcgggtg gtacgtcatt ttttgctcga gcggaaatca aagatatgat
    51481 ggcgtatctg cggttggtag tgaatcaaga cgatgatgca gctttcttgc gtattgtgaa
    51541 tacgccgaaa cgggaaattg gggcggcaac gctagaaaaa ttaggcatac ttgctaatga
    51601 aaagcaggtc agtttgtttg aggcgatttt tgattttgaa ctcatacaac gcctcacgcc
    51661 aaagccttac caagccttac aggattttgc ccgctggatt gtggaaattg ccgatcaagc
    51721 cgatagatcc gatccgattg aagcagtaaa agatctgttg gcgaaaattc agtatgaagc
    51781 ctatttgtat gaaatggcgg cgaacccaaa agtagcggaa atgcaaagcc gtaatgtgca
    51841 gaccttgttt gaatgggtgc aagcgatgtt agagggcgat gaaatagagc ctccgatgaa
    51901 tttggtgcaa gtggtaaacc gtttaacctt gcgagatatg ctcgaacgtg gcgaagagga
    51961 cgatgaagcc gatcaagttc aactaatgac tcttcacgcc tcgaaagggt tggaatttcc
    52021 gcacgttttc ttaatcggta tggaagaggg gattctgcca caccaaacca gccttgatga
    52081 ggacaatgta gaagaagagc ggcgtttggc ttatgtcggc attacccgag cccaacaaac
    52141 gctcacgttt tcactgtgta aagaacgtcg ccaatatggc gaaatcatca aacctgagcc
    52201 gagccggttt ttactggaat tgccacaaga tgatttggag tgggaaagtg aaaagccaag
    52261 aatgaccgaa caggaaaaag aggcaaaatc ttctgcaaat attgcaaatt taatggcgat
    52321 gctgaaagca aataagaaat aatgggataa caagcggtct gattttggta aaaatttgca
    52381 attttttgcc agaatcagac cgcttgtaaa caatgattat tcctcttcgg taaagcgttt
    52441 ggctttataa gtcggattca ttaagttctc aatcgagaga atatcatcga gttgttcttc
    52501 ggtgagtaag cctcgctcaa gcacaacttc tcgtacactt ttgccggtgg ttgcacaaat
    52561 tttgccgaca atatcaccat tatggtggcc gataaatgga ttgaggtagg tcacaatacc
    52621 aatagagctg aacacatagt tttggcagat gtcacggtta gcggtaatac cgtcaataca
    52681 tttatcacgt agattaatac atgcattgga aagcagctcg atagattcaa acattgcttg
    52741 cccgataacc ggctccatta cgttaagctg taattgaccg gcctctgctg caaaagtaac
    52801 ggtggtgtcg ttaccaatca ctttaaagca cacttggttt acgacttcag gtacaacagg
    52861 gtttactttt gccggcataa tagatgagcc ggcttgtaat tccggaagat taatttcatt
    52921 taagccggca cgtgggcctg atgaaagtaa tcgtaagtca ttacacactt tagaaagttt
    52981 gacggcggtg cgttttaatg caccgtgaac cattacataa gcaccacagt cagatgttgc
    53041 ctcaatgaga ttttcagaca gtgagcaagg cagttgcgtg acttcggcta aatatttaac
    53101 tgcaagagta gagtaaccct ctggcgtatt cagaccagta ccgatagcgg ttgcgcctaa
    53161 attcacttca agaagcaatt ctgccgtccg tttaaggtta cgaacctctt catctaataa
    53221 tacggcaaaa gctttaaatt cctgaccgag cgtcattggc acggcatctt gtaactgcgt
    53281 tcttcccatt tttagtacat cggaaaactc agtggcttta ttttcaaatg cagtttgtag
    53341 gtaagtgatt ttattgatta atttagtgat actgttataa accgcgatgc ggaaaccggt
    53401 tggataggca tcattggtgg attggcttgc attaacgtga tccattggat tgacaatatc
    53461 atatttacct tttgcctcgc ccaaaatttc taatgcaagg ttggcaatca cttcattggt
    53521 attcatattc accgatgtgc cggctccacc ttgataaaca tctgaaggga attgatcgag
    53581 acagcgtcct ttcactaata cttcatcaca ggctgccaca atagctttgg caattttttt
    53641 cgggattgca cccaattcac catttgccaa cgcagtagct ttttttacca ttaccatgcc
    53701 acgcacaaat tcaggtacat cagaaatggt gacatttgag atattaaaat tctcaatcgc
    53761 tcttaatgta tgaatgcccc aataagcact attaggtact tctctttcac caagtaaatc
    53821 gtgttcaata cgcacatctg acatattcat ctccttaaaa taaatgacaa tcgattttgg
    53881 tagataataa cgattttaat agacaaataa tgcgatctaa atcaaatttt ttgtgagcgg
    53941 actaggatat aaattgggct ttcggattaa aaaaagtaat gataaattaa tatgatgata
    54001 aagctaaata aaagtaaggc aagccaatca gccaagcaaa agtagaaagc acaacagcga
    54061 cgtggaaata ccaatgttgg gttttatggc gaaagtattt catacctagg taaacaccga
    54121 tagccccacc taagaggcaa aaagagagga gagtaatttc tggcactcgc cattcttttt
    54181 tgatcgcttt ttgtttgtca ctatacatta aatataaggc agctaggttc attaagacaa
    54241 agtagatagg ccaaaatagt tgcatttgca ttcctcaata aaaatttaac cgtttgcaga
    54301 tcagttacta caagcggtca attttagcat ttattttgca aattagcgga tttcaacttg
    54361 ctcgctaccg gtgcctaagt cttcaatttt accgataagc cacgcatttt caccactctc
    54421 tttaagaaga gtaagggctt tttcgacatc tctctcaggt aaggctatca ccattccgac
    54481 accgcagttg aaagtacggt acatttcata acggctgata ttgccttttt cctgtaacca
    54541 gctaaatatc gccggccatt gccagctcga ttcatcaatc accgctttgg cagattccgg
    54601 caatacgcgt ggaatatttt cccagaaacc gccaccggtt aagtgagcga tagcgtgaac
    54661 atcaacttct tcaactaatt ttaggattga ttttacataa attttagttg gggctaataa
    54721 gtgttcgctt aagggtttgt cttccaataa atcggttgca ggattggatc ggctgacttc
    54781 caatacttta cgaattaacg aatagccgtt ggaatgcggg ccactggacg ctaatgcaat
    54841 taaggcatca ccggttttca ccgttgaacc gtcaatgatt ttagattttt ctaccacacc
    54901 gacacagaat ccggctaaat cgtaatcgcc ttcgtggtac attcccggca tttcagccgt
    54961 ttcacctccc actaaagcac aacctgaaat cacgcaaccg tctgcaatgc ctttgacgac
    55021 attggtggct acatcaacct ctaatttacc ggtggcgtaa taatctaaga agaaaagcgg
    55081 ttcagcacct tgcacgacaa ggtcattcac acacatcgct accaaatctt gcccgatagt
    55141 atcgtgtttg tttaagtcaa tggctaagcg taattttgtg ccgacgccat cggtaccgga
    55201 aactaaaatc ggctctttat attttgtcgg taaagcacat aaagcaccaa aaccacctaa
    55261 tccgcccatt acttcagggc gacgggtgcg tttaacatca ggcttgattc gttcgactaa
    55321 ctcgtttcct gcgtgaatat caacgccggc atctttgtaa cttagttgtg tgttgctcac
    55381 tttaacctca acagtaaatg actaaaaaac gaagccatta tagcacaagc aaacgtttgc
    55441 ggaatgaaaa agtgaaaata aatagaatgg atttgatgaa ttagggggaa gctaattccc
    55501 cctgcaagcg gttaagttta gctgattttt ttcgccaaca ttgtcgcaaa acgtagttga
    55561 atgcggttgc cgttttcatc agttttgtgt aaatgtccta aatcttcgtt atatttgact
    55621 aattcccaac cttgataata atcggcgagc tcgccttctt tgaaggtaaa ggagaacggc
    55681 atcgggcaag ggtagtcatc ggtactcatt gcacatacga ttaagttata accgccgact
    55741 ttagtgtttt tctgcatatt ctcaataatg gcaggaatgc gttcacggtt taagaacatc
    55801 attacaacag tggaaataat caggtcatat tcaccgtttt gcgagccgat agttgcctcg
    55861 ttaatatcat aaacagcggt agtaatgttt tgagcttgtt ctttttcgat catatagttg
    55921 agaaaatcaa tgctttcttg attatgatca acagcagtga catcaaaacc cagtaaattc
    55981 agataaagtg cattgcgtcc tcgcccgcaa cctaaatcta acgctttgcc acctttggta
    56041 taattgacgg catttagcac ttctgaatgg gtagcggtca gattatattt tttagcaaaa
    56101 taatcttccg gcttgcaata gaaagccaac tggcattcta aatcgtcaga aagagcttca
    56161 accttatgcc aaagttgagg ctcaaccatt gggcgttggt ggtttgcatc aaaaatatct
    56221 tccttgataa tttctccctc ttcggttaat tcataatatt tgagagaacc tttgagaatg
    56281 gtgagttttg cccaagttcc gactttggtg ttgtgctttt cttggaacat ttgtggtaag
    56341 gttgcttttg tccacaccgg catttgtttg tagcaaatta aattttccat tttgtttcct
    56401 tttgtcagtc aaacataaac ggcaaaattt tagcactgtt ttaaaaacag gaaataaaaa
    56461 atccgactaa aaaagtcgga tttgatcaaa tttctgttaa atatatttta gtcaatgttc
    56521 acgcttctaa attggcgggc aaaataaact aaactgtggt tcggctctac gtcaatatgg
    56581 ctcacttcta ccacaaaaat agtatgcgta cccactgcgt gcgtatcaac aatattgcct
    56641 tgtaaagcag aaatagcact gcgtaacaca ggctgatcgt caaagccgtt gttccaaata
    56701 tcccaaccaa agcgttcttc cattgtactt tctaaaatgg cggcaaaatg ttttgctaag
    56761 tcttcttgtt cgtggcttaa cacattaacg catactttgc cgttttgttg gataatatcg
    56821 tgaacgtggc tgtttttatt aatgcaaaat aagagcgttg gtggggaatc ggtaacggaa
    56881 caaacagacg aaaccgtcag ccctgctttg ccggctacgc cattggttgt cacaatgctc
    56941 accgcagaag ataagtgagc cattgcttca cgaaatttaa gcgaggcttc tattggttga
    57001 ttagtgtcga tattagccat tttttctcct ttttattttt ctttccaaac aacgtgatat
    57061 tcacggtttt cttcatcgtg ggaaattaag aaacgggcga atacatcgtc catttcatct
    57121 tgttcattga ctaagccaac ccaaacttcg gcaaaggcat cagggtcaat taaagtcccg
    57181 atttcttgat cccagtcttc agaagtttcg accatttcca ctgcaccacg ctcttcaaat
    57241 tggaggttga acagtaaaat atcggcagga tctaaatttt cgcctgccat ttctaagaaa
    57301 atatcgtagg caatatcaat ggcttcatca ggggttaatt ttttcatttc gttattctaa
    57361 tttgagtgtt aataaaatgt tagatagata agttttattt tatatttttt agttataaaa
    57421 aacaaaaaga ttatagctga atcagacggc ttaccaccat tccggctgct ttttccttta
    57481 aaatttgcca gccttgcggt agctctaatg gcgggtgatt tttctcggtt tccacataca
    57541 aaatcgcatt cggggcgagc cagttatttt ctgccagcaa gtttagcact tgaggtacaa
    57601 acccttgatg aaaaggcgga tcgataaata cgatgttaaa tggctcaccg ttattttttt
    57661 gtgctaaata ggcgagggtg tcagtgtgaa taacgctacc ttgttcggat tttaatgctt
    57721 ggagattttt ctttaactgg ttggcagcat ttgcaaattt ttccaaaaaa acgaccgctt
    57781 gtgcttggcg ggaaagggct tcaatgccca gagagccact gcctgcaaag caatcaagac
    57841 agcgtgagtg agcaatgtcg tgcattaacc agttaaacag cgtttctttt actctatcgg
    57901 ttgtcgggcg aagcccctcg gcatttagta caggtaattt tctgcctcgc cacagtccgg
    57961 cgataacccg tacttcgccc atttgctgaa cagattgggg ggaatttcga ttttttttca
    58021 tactcactaa aggaaaataa gggatttttt gatagactat gtaagtttag tctattttta
    58081 cgagaaatga gagaaaaata tgtcagagaa gaaaaaaggg ttttggtctt ggcttggatt
    58141 tggtaagaaa gaagaagctg aacagaaaga gattcaacaa gaacaagaga gtattcaacc
    58201 ggaacagcct gttattgttg aaccggaaac tgagaagtcg ttttctgaaa aattagatga
    58261 gctggaagat aaaattgaag aaaaggtaga tcagttagaa gactattttg aggaaaaaga
    58321 agaaaaaatt gagcaatttg ctgagcaagt agaagatacc attgaacaaa aagtcgaaga
    58381 tttcaaagag tttgttgaag aaaaagttga agaggcgaaa gcgttctttg atgatgttga
    58441 agataaaatc gaacaaacat ttgaagaaca aaaaggcgaa caagcggtcg aaaatcttca
    58501 aaatattgca actgagcagt tagatctcaa cgaacaagag caagttactt atcaagtcga
    58561 agaggctgtg gctgaagaag ttgctgaaac tgaattagta aataatgttc aagacacagt
    58621 tgaagaatct actatccaag atgaatatca agaaaaaccg agtcaaggcg gtttcttcag
    58681 tcgtttaatt caaggcttga ttaaaaccaa gcagaatatt ggttcgggct tccgtaattt
    58741 cttccgtggc aagaaaattg atgatgagtt atttgaagag ctggaagagc agttgcttgt
    58801 ggcggattta ggtatgccga ccacacaaaa aatcatcaac aatttaacgc aacatgctac
    58861 caagcaacaa ttaaaagatg cagatttgtt gtatcaacag ttgaaagtgg aactgggtga
    58921 agtgctaaaa ccggtggctc aaccgttagt gttggaagcg aaaaaaccgt atgtcatttt
    58981 aatggttggt gtgaatggcg tggggaaaac cactaccatt ggcaaacttg cccgtaaatt
    59041 ccaacaagaa ggcaaatcgg taatgttagc agcaggagac acgttccgag cggcggcagt
    59101 tgaacagcta caggtttggg gagagcgaaa taacattccg gtggtggcac aaagcaccgg
    59161 ttcggattct gcctcggtga tttttgatgc gatgcaatcc gctgcggcaa aagggattga
    59221 cgtgctaatc gctgatactg cagggcgttt gcaaaacaaa aataacctga tggacgagtt
    59281 gaagaaaatt gtgcgggtga tgaaaaaata tgatgaaacc gcaccgcacg aaattatgct
    59341 tacgcttgat gccggcactg ggcaaaatgc gatcagccaa gcgaaattgt ttaatgaggc
    59401 agtgggttta accggtatca ccttaactaa attagacggt acggcaaaag gtggcgtgat
    59461 ttttgcgatt gccgatcaat tcaatattcc gatccgcttt attggggtgg gcgagaaaat
    59521 tgaagatcta cgcccgttta atgcagaaga atttattgaa gccttattta gccacgagga
    59581 cgaacagaat gattaaattc actaatgtga acaaggttta taagggcgga aagccagcct
    59641 tacagggcat tgatttccac ctacctgccg gtggaatggc atatattacc gggcattccg
    59701 gtgcggggaa aagcacgcta ttaaaattaa ttatggggat tgagcgtgcc aatggcgggc
    59761 aaattttgtt taacggacac gatattaccc gacttgctca tcatgaattg ccgtttttac
    59821 gccgccaaat cgggatggtg catcaagatt atcgcttatt aaccgaccga accattttgg
    59881 ataatgtcgc attaccattg attattttgg gaatgaacca agcgattgtg gagcgtgaag
    59941 cccgcattgc ccttgagcgt gttggcttgg cagataaagc gaactatctg ccgttgcacc
    60001 tttccggcgg tgagcaacaa cgtgtcgata ttgccagggc cattgttcat cgcccaacgc
    60061 tgttattagc cgatgagcca accggaaact tagatgaaaa gctctcgttt gaaattttcc
    60121 gtttgtttga ggaatttaat caagccggca caacggtgct gattgccacc cacgatacca
    60181 atattatttc aaagcgtcca aagccgtgtt tagtgctgga gcaagggcat cttaaatttt
    60241 aaggaaatat tatgattcgt tcatttagta aattaggtgc tcaaaccaac tactctttaa
    60301 gagcggtttg gcaagattta atgcaacgca agctcggcac ttttctgacg gtgctggtga
    60361 ttgcggtctc acttacgatt ccaaccgtga gttatttact ttggaagaat acccacgagg
    60421 cagcaacaca attttaccct gagccacaat taaccgttta tctgcacaaa aatttggcag
    60481 aacacgatgt gaataccgtt gttgatcgca ttcgtgcttt tgagacggat aaaattgagt
    60541 catttaacta tatttctcgc caacaaagtt tagacgaatt tcgttcttgg tcaggctttg
    60601 gtgaagcgtt agatatttta gatgaaaacc cgttgcctgc ggtcgttacc ttaaaaccga
    60661 aagcaaattt taataatgct gatacgatgg tggagctacg caacggtttg caacaaatta
    60721 aaggggtgca ggaggttcgt ttagataacg gctggctgga aaaattaact gctctaactt
    60781 ggctgattgc tcgtattgcg gtggtgtgta ccttattaat gctgttggca gtttttttag
    60841 tgattggaaa cagtgtgcga accgatgttg ccaatagcaa agcagcgatt gaagtccaac
    60901 aaattttagg ggcaactgat cactttattg cccgtccgtt tttatacaca ggtatgattt
    60961 acggcttgtt tggcagcctg ttagcggtgc tgtttagtgc ggtaacgatt agctatttca
    61021 ccggtgtagt gaagtatgtg actgatatgt ttaccgtaca atttgaactg aacggattag
    61081 atttcagcga agccttcttc ttagtggtgc tttgtgtgtt tattggctgg ctgtcggcaa
    61141 aaattgcgac aatgcgaaat attttccgta ttggtagtag aggctaatac aagcggttgt
    61201 ttttagagaa ataattgcag ataaaaacca gttcctagga acttggtttt ttactataag
    61261 caatatatta ttgct
//
LOCUS       DANMCL010000004        50930 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.004, whole genome shotgun sequence.
ACCESSION   DANMCL010000004 DANMCL010000000
VERSION     DANMCL010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 50930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 50930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..50930
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.004"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(133..585)
                     /gene="ssb"
                     /locus_tag="PXF40_000201"
     CDS             complement(133..585)
                     /gene="ssb"
                     /locus_tag="PXF40_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5801583.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GERREVTEWHRIVFYRRYAEICGQYLRKGSKIYIEGKLRTRKWQDQNGQERYTTEIQG
                     ELLQMLDSRNATNSVDGQQSNYQAMSQSPKATHPQDLPMDNFDDDIPF"
     gene            complement(941..1426)
                     /locus_tag="PXF40_000202"
     CDS             complement(941..1426)
                     /locus_tag="PXF40_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3158 family protein"
                     /protein_id="HDL5801584.1"
                     /translation="MNLISDEIYRQLVKDSGLNTSLKQLFSHFDTGSDYELLQEQFTQ
                     ARAYFMAAQDSMVQSVRQDLSPLAVYMIKDKASSSGGTFLRWRSMQNARTGGTVWQPI
                     VDDKSVPVEVRKKVVAVEKDRILINMQISVFNHILRQLADCAEKLKEVDNAVAKSDLN
                     S"
     gene            complement(1435..2193)
                     /locus_tag="PXF40_000203"
     CDS             complement(1435..2193)
                     /locus_tag="PXF40_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03761 family integrating conjugative element
                     protein"
                     /protein_id="HDL5801585.1"
                     /translation="MTTQLDPQLGPLRSEITFTLHTQYAHKLWVGRPMIRNEEGKVTQ
                     SSIISVPNCFAMLTQIQRAASEDDPYADDYLIQFEESVINYRKEIQKLTNDIVTLYAK
                     MLPEGISIERCANISPISYPIYVNSQLGYQLLYLLGDFDSLCRSVMTAAHIAIINRAE
                     AQDWIEAGARLIRKCFGIVERYKSSGITRRDYQEKNARYQAAIKRMGYTLSDAVLTGE
                     HRAEFAPFIKQNTTVEEEQSVETHITAQTNESQK"
     gene            complement(2372..3562)
                     /locus_tag="PXF40_000204"
     CDS             complement(2372..3562)
                     /locus_tag="PXF40_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801586.1"
                     /translation="MFSSTNKPTEHGLLFFGNQHETVPTRLLQDPCLTPRAKFAWQLI
                     KCNVQAFQGGLFPSYETLSKMLSDRPYAEAKLSEKVVTQTLYLLRLTRWLTLCETVRD
                     ERGYVQGNVYILHDEPVPILDAIQLNSDYLSFLDKCTKHKDSLINGVANHIVESLITD
                     KTKWHYVSHLDCLQSRYQIYQQQQLVKDKQPSQTEQELSKIQQNILTSTMEVRDFDEE
                     VRKKSSKNQTSNKGVRAKNEDKSLILDLLPLGKSDVQYRTLYINKYCTGEPSEITWPQ
                     EIPLTSLEQKLTAQAMKGLDLGLCQAILLEVQQRIIQKQDVKKPKGYLYTLIQRAKQG
                     EFKPYYFELGKNLPSQNQANNNSAHSIQKLTEQPTEKPVLTSADREQMASRMQKFRAE
                     LLLQ"
     gene            complement(3721..4278)
                     /locus_tag="PXF40_000205"
     CDS             complement(3721..4278)
                     /locus_tag="PXF40_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2857 domain-containing protein"
                     /protein_id="HDL5801587.1"
                     /translation="MIKPITVNEALIGNALLNIKEGNIHPCLKMGFSEEQLKAINNLS
                     IDEIMDISNSVVSFAKVEINHETFWKLLAIAQANTQQRQIIDRALLLGASIEMLHQYF
                     GLSTSEVSARRQLLGIEEKMGRKAAASDEESTHIWEIWQRYKQRMEILDSQEGLELLC
                     LIAEEGNMNLTVVWKLVSEWYSKHK"
     gene            complement(4271..5917)
                     /locus_tag="PXF40_000206"
     CDS             complement(4271..5917)
                     /locus_tag="PXF40_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5801588.1"
                     /translation="MTKDEKRLAAIAKGLNVSPISNTAPSYQTATPTHYSSDVEYITV
                     TLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQ
                     ALKELFTETKDPKFWSISCQYKPWQGDTADSVEAELNLLIGHLIENDTRADLSFIEKA
                     LGILQAKEYYEKKLGKSLSSRELSSELENDGYIISHALILKMERCVNYLYPHIPEVLF
                     SGLGHTQIDKLLAIRNNAEEVWAAHQFDTDVTFESLWSENLSKFNEATPFQAKEFQSE
                     LITAMVEALEGKVSFETLYLDIDLDEQKFKKIAAKQQEIDNLVEKTVDQINTRQEQQT
                     AKSEPLIKNENKAVTPQKAQHIIDEVIDDNESDDEQNNAITDLSQLGSSLLDNQDNQE
                     DYLSQIAHNFGLTPGMSIQEQREQRAEANGLTFACEGRQPVEDIWLIHPARQYRSEAY
                     SLALDIAESMGIDHLVEHIVKQPVDYTYAMKPADTELSPSALTLYSFLSMLQTAEHKD
                     ENSCVLDSKFLFELDDLTLVKIFRLIRVSRHIRQQGGEND"
     gene            complement(5926..7287)
                     /gene="dnaB"
                     /locus_tag="PXF40_000207"
     CDS             complement(5926..7287)
                     /gene="dnaB"
                     /locus_tag="PXF40_000207"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5801589.1"
                     /translation="MSSLNKSLVQPHSIEAEFSVIGGLLLDNELFDEVSSKINEGDFY
                     NFTHRLLFKHISELIEAGKPADILTLDQYLTQKKVIEDLGGFAYLAEIVKNTPSTANI
                     HAYTDIVLLYSKQRQLLKLGQFIVDQTQSAKTPDKFEAVVDDIEKKITEFSLSDNTKS
                     AADLSDIFANMLSRMELSAKNGDPVTGTPTGIQGIDEATTGGQPGDLIVIGARPSMGK
                     TAFSQTIAYHTLKKFESAPVFYHSMEMPADQILQRFLAMRARVGLQNIRQADSLDDEE
                     WSKLTSAMGYILEHWKNRLVIDDEGSLTPQKLRTKVRQNARKYGKPAAIFIDYIQLMQ
                     TSQRYENRNLEIANISRSLKLLAKEMDCPVYALSQLNRSVEQRANKRPINSDLRESGS
                     LEQDADVILFIYRDEVYDADSPFKGTAEIIIGKQRNGPLTSVMTNFRSEFALFENRTN
                     TTH"
     gene            complement(7299..8123)
                     /locus_tag="PXF40_000208"
     CDS             complement(7299..8123)
                     /locus_tag="PXF40_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HDL5801590.1"
                     /translation="MKPLQNGTNKPFTITIASTKGGSAKSTNAANIGAFCAEHGLRTL
                     LIDTDTQPTLSSYYELEYQAPGGTYEFLHFKDVDPTHIISRTTIPNLDLIQSNDPSNK
                     ISPMLRDSPDGALRFSLLLQKIEGYDVIIIDTRGTRDITVDMSVLAADVLFCPILPHI
                     LSAKEFIRGTIGMYQDLETFTAFGFTLPPLKAMINCVDHTKDVKLVSDYLHTLFQNEF
                     DENKTLLEFSVPDRVAYREAATFSKPVYRQSQAEYETISQLCALLMPQFANSHFSA"
     gene            complement(8221..8306)
                     /locus_tag="PXF40_000209"
     tRNA            complement(8221..8306)
                     /locus_tag="PXF40_000209"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8270..8272),aa:Leu,seq:caa)
     gene            complement(8618..10078)
                     /gene="xseA"
                     /locus_tag="PXF40_000210"
     CDS             complement(8618..10078)
                     /gene="xseA"
                     /locus_tag="PXF40_000210"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HDL5801591.1"
                     /translation="MSNILTVTQLNYSVRHLLEMEMSHIWLTGEISNFSQPVSGHWYL
                     TLKDDKAQVRCAMFKMKNVRVNFRPQNGMQVLVRASVTLYEPRGDYQLIIESMQPAGE
                     GLLQQQFEQLKAKLSAQGLFAQEHKKPIPTFVKTVGIITSSSGAALQDILHILQRRDP
                     SLSVVIYPALVQGKEATQDIVNMIELANRRNECDVLIVGRGGGSLEDLWCFNEESVAY
                     AIYHSQIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQNELKRQLQHQFDKV
                     NLAFDRVWNHKFNRFQQLPLRLNAQHPSKQIQSQQQRFDYMEYRLEQAIYALVAAKKQ
                     VGKELNVRLIHQHPQKQIERQSQMLKQLELKLHWQMEQQLSKKQQKWKNITQRFERNP
                     LPYQLYQQQTMVAKMSQRLAYSIEKIMLKEQRHFQELCTKLDGLSPLKILTRGYSITQ
                     TKDGKTLTSTENIERGEAIITQLKTGKIISQVVDFL"
     gene            complement(10229..10305)
                     /locus_tag="PXF40_000211"
     tRNA            complement(10229..10305)
                     /locus_tag="PXF40_000211"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10269..10271),aa:Met,seq:cat)
     gene            10515..11621
                     /gene="mltA"
                     /locus_tag="PXF40_000212"
     CDS             10515..11621
                     /gene="mltA"
                     /locus_tag="PXF40_000212"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HDL5801592.1"
                     /translation="MNWKAYKKAIAAASVVAIATVLVACSSSGQKGKTTSYDAEKAKF
                     GAKYNGRHFMPYGTHFQAGRLGLNAAPVNQLDFLQQLSNVRAYSSLADSYAIAYGKIS
                     RWISSGGNINDLAKYGISTRLMRGEDGYQNVLMTGYYSPVIKARITPQGQYQHPIYAM
                     PSSKRFSRAEIYAGALQGQGLELAYSNSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQ
                     NGFKYASVGRLLVEDGEIPKEKMSVQAIREWGQRNPSRVQGLLERNPSYVFFKNDPTG
                     QVKGSAGVPLVPLASVASDRSIVPSGSVLLVEMPLIDSKGNWTGKHEMRLMVALDVGG
                     AVKGHHFDLYQGIGDKAGHIAGLMKHYGRVWVLN"
     gene            11634..12083
                     /locus_tag="PXF40_000213"
     CDS             11634..12083
                     /locus_tag="PXF40_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801593.1"
                     /translation="MLKKLSAIFLLLPSAVLANNLQNITASTEPKYKISEIDVRILIR
                     QLNNIEQCIYPELAKPGYQQIYANWNLAENLTMQYFEYQLLKELLGEENQKLMQNDTL
                     STEYFHLLHSRLNHQKANVDPEKCDTFKPRYKEIYKSMENALTKKNQ"
     gene            complement(12117..13634)
                     /gene="purF"
                     /locus_tag="PXF40_000214"
     CDS             complement(12117..13634)
                     /gene="purF"
                     /locus_tag="PXF40_000214"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5801594.1"
                     /translation="MCGIVGIIGNSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFR
                     LRKANGLVSDVFQQEHMVRLQGNVGIGHVRYPTAGSSSVSEAQPFYVNSPFGITLVHN
                     GNLTNNAELKARLYNEARRHVNTNSDSESLLNIFAYFLDLYSTQHLSPDNIFETVRKT
                     NDSIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKREIEGKTEYMFASESVALDVVGF
                     EFVRDVLPGEAIYVTFDGQLHSQICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARV
                     HMGELLGEKIKREWGRIIDDIDVVIPIPETSNDIAVRIANMLYKPYRQGFVKNRYVAR
                     TFIMPGQAQRKSSVRRKLNAIASEFKGKSVLLVDDSIVRGTTSEQIVEMARAAGAKRV
                     YFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAQMIGVDKLIFQDLEALYKSIQL
                     ENPTIHRFDDSVFTGEYITGDVDKCYLDSIARSRNDKAKAEAAKQATNLEIHNER"
     gene            complement(13649..14152)
                     /locus_tag="PXF40_000215"
     CDS             complement(13649..14152)
                     /locus_tag="PXF40_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HDL5801595.1"
                     /translation="MVDLIVIGIIAFSVLISLWRGFTNEALSLLGWVIAFFVASSFYP
                     YLSGYLTQINSVYLQNSEFLRNGIAAAILFILTLIVCGVINGLLGKVIDLSGMSITDR
                     ILGGAFGALRGILIVSAILFFLDTFTQASQTELWKSSLLIPHFDFIVKWFFEQLQANS
                     SFLNTTK"
     gene            complement(14298..14759)
                     /gene="rnhA"
                     /locus_tag="PXF40_000216"
     CDS             complement(14298..14759)
                     /gene="rnhA"
                     /locus_tag="PXF40_000216"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HDL5801596.1"
                     /translation="MKLVEIFTDGSCLGNPGKGGIGILLRYNGYEKTVSKGYFQTTNN
                     RMELRAVIEALAMLKEPCKVQLNSDSQYMKNGIQKWIFNWKKNDWKTSDKKPVKNKDL
                     WVALDQEIQRHQIEWSWVKGHSGHRENEICDELAKQGANNPTLDDVGYIAD"
     gene            complement(14852..16183)
                     /gene="argG"
                     /locus_tag="PXF40_000217"
     CDS             complement(14852..16183)
                     /gene="argG"
                     /locus_tag="PXF40_000217"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005722481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HDL5801597.1"
                     /translation="MSATILEALPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTA
                     NLGQPDEDDYNAIPKKAMEYGAENARLIDCRQQLAHEGIAAIQCGAFHISTGGIPYFN
                     TTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLD
                     QLFIDELGGRLEMSKFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIV
                     KPIMGVAFWDESVEIKAETVSVTFEEGVPVALNGKRIDDAVELIMEANRIGGRHGLGM
                     SDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQ
                     GRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEK
                     VEDAPFTPADRIGQLTMRNLDIVDTRGKLAVYTDAGLLAANNSVIPQLGKK"
     gene            16367..17407
                     /locus_tag="PXF40_000218"
     CDS             16367..17407
                     /locus_tag="PXF40_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5801598.1"
                     /translation="MKKLLVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAP
                     LAELCPSIDKIIIDTANKKDKNEFNRILQAVKNEQFDAVICFVSDWHNAKLTWQSGIK
                     YRLAPATKLFQFLYNHRLTQRRSQSAKAESEYNLDLARAFLSKHNIPIVEPHTPYLSV
                     EQQTVQAQKAKLCEQLNITTVKKWVFVHSSTGGSANNLSIEQYAELIQGILAEFDCYV
                     VLTAGKGESEKAQQLAQQINHNNVVVYDKNEGLQDFTHSLACADLFIAGSTGPLHISG
                     ALNIPTIGFYPSRLSAIPRRWKPINDANKHIAFCPPSDKASQMNLTLISISEALKTIV
                     PFIRRMWNTPSL"
     gene            complement(17472..18230)
                     /locus_tag="PXF40_000219"
     CDS             complement(17472..18230)
                     /locus_tag="PXF40_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HDL5801599.1"
                     /translation="MPTLSVAMIVKNEAQDLRACLDTVKDWVDEIVILDSGSTDETPQ
                     IAAEYNARFYTNTDWQGFGKQRQLAQQYVTSDYVLWLDADERVTAELKQSILQAVKND
                     EKNTVYKISRLSEVFGKQIRHSGWYPDCVVRLYRTEFAKYGDELVHEKVHYPKEAKIQ
                     KLQGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKTASLFDGVTHAIGCFVKMYLL
                     KAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRK"
     gene            18357..18671
                     /gene="yhbY"
                     /locus_tag="PXF40_000220"
     CDS             18357..18671
                     /gene="yhbY"
                     /locus_tag="PXF40_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HDL5801600.1"
                     /translation="MSITLTTKQKQFLKGLAHHLSPVVMLGGNGLTEGVLAEIDNALD
                     HHELIKVKVAGADRETKQLIIDAILRETKAAEVQTIGHILVLYRQSEEKKISLPKATK
                     AI"
     gene            18732..19454
                     /locus_tag="PXF40_000221"
     CDS             18732..19454
                     /locus_tag="PXF40_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HDL5801601.1"
                     /translation="MFKKFSLYTLAMLLIPVVTWLANWHWSLAIQYAEFDFDYFLYLI
                     TETGSVPYAIITCVVFALLLARVVRKRYSLIFVITVCVASMVATQAIKTAMKSTFQEP
                     RPFVTALFQDKTDDFYQLTREQRGLAVMEKIGANQNFVTAHQAKEVGYSFPSGHTIFA
                     VSWLLLVVGFCRNMRGQAVVLAHFFAISWAALMLISRLRLGMHYPIDLFTSSLIAFLI
                     NLALFVWFVPWLESKKWFAKKP"
     gene            19523..19684
                     /locus_tag="PXF40_000222"
     CDS             19523..19684
                     /locus_tag="PXF40_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801602.1"
                     /translation="MEMSIEKIAELLSDKEKDDYPFSIEERQFAAQASADTWEAILNN
                     TIQPFDFKK"
     gene            19692..20054
                     /locus_tag="PXF40_000223"
     CDS             19692..20054
                     /locus_tag="PXF40_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801603.1"
                     /translation="MYQVFIAEPKDPNLEKGLLKHFIKSYLTQEELDFLHKILTNLPN
                     IRPFWGDTGYKYIVIDNVYFLYEVSESETKVILLGTKFNNKRKTFNFANTKTQQKSMK
                     KWINDLAIYKPHKINQSQ"
     gene            20067..20984
                     /gene="nagK"
                     /locus_tag="PXF40_000224"
     CDS             20067..20984
                     /gene="nagK"
                     /locus_tag="PXF40_000224"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HDL5801604.1"
                     /translation="MAIYYGLDVGGTKIELAAFNEKLEKLHSERVPTPQTNYQDWLTA
                     IKTLVETADTKFDEKGTVGLGIPGFVNRETGIAEITNIRVADGKTILKDLAECLGREV
                     RAENDANCFALSEAWDESNKPYSTVLGLIIGTGFGGGFVFDGKIHSGRIGMAGEVGHM
                     QLNYHALKLLDWDKAPIYECGCGNQACLDTYISGRGFELLFNNLVGEKISAKAIIERF
                     YQQETKVVAFVEKYIELMAISISNLITILDPDMIVFGGGLSNFDYIYQALPKALPKHL
                     MRSAKVPVIKKAIHGDSGGTRGAAALFLK"
     gene            complement(21055..23004)
                     /locus_tag="PXF40_000225"
     CDS             complement(21055..23004)
                     /locus_tag="PXF40_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HDL5801605.1"
                     /translation="MYQRSQSRTVLFPILLFVGINLVILTLSRLVLGVWQSDRVSAVD
                     GWIPLILQGIRIDISSLCWLFGLPALFSVLCFHKNVLGSIWQTVLRIWLTVGSVFILF
                     MEVATPNFIETFDLRPNRLFIEYLVHPREVFTMLINGHLWAVICGIGIAMISLIIYWK
                     LSGWATKNLHFPSWKMRPLLALLVAAIVFVGGRSSFAHRGINPAMVAFSSDPLVNSLV
                     LNSGYSVLYAVQQLKDEDKSSEQYGKMSVEEMFNIVKQVRNRPASDYISDEIPTLTQN
                     KATYQGKPKNIVIILEESLGAQFVGSLGGKNLTPNLDKLSEQGWYFTNLYATGTRSVR
                     GIEAVTAGFTPTPARSVVKLTKSQTNFFSIAELLKRQGYHTSFIYGGEKHFDNMASFF
                     YGNGFQQIIDEKDYKNPKFTATWGVSDEDLFDKANETFNQLHKSGKPFFSLVFSSSNH
                     DPFEFPDGKIELYEQPKQTRHNAAKYADYAIGHFFELAKKSEYWQDTVFLVIADHDSR
                     AVGEHLVPIQHFHIPALLLGEHIQPRTDNRLVSQLDMPTTLLSVAGISGQYPMIGYDL
                     TQDIDPNRAFMQYDATQAMMRGNDVVVMRPNLPIEGFSYDKANYKLTPKEQPESFKKE
                     ALAHALLGSYLYKNQLYKLPEETKQ"
     gene            complement(23037..23825)
                     /locus_tag="PXF40_000226"
     CDS             complement(23037..23825)
                     /locus_tag="PXF40_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HDL5801606.1"
                     /translation="MQVTELNIYPIKSTQAIQVSQAFVEPKGLNFDREFMLAEPNGKF
                     ITARKDPELYRLAAFPIATGVMITHTSGQKCVALYQDFVEEQSSEVWGTHFNAKVAAE
                     AVNQWLSEIFGRAVQLRWLGSQSQRIVANFADHPMSFADSNPVSLMSLKSLEQVQQWS
                     PIPLEMARFRPNIVIDGNVAFEEEQWQQVQIGEVLFTKAALCTRCILITRDLNTLELD
                     PKSEPFRTLKEKHCDEKGKPVFGIHLVPQNSGVIKVGDPVIIQL"
     gene            23950..24180
                     /gene="xseB"
                     /locus_tag="PXF40_000227"
     CDS             23950..24180
                     /gene="xseB"
                     /locus_tag="PXF40_000227"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HDL5801607.1"
                     /translation="MAKKPTQDFESTLKELEAIVTHLESGDLPLEEALNEFETAIKLV
                     QQGQERLQKAEQRIQILLNKNDTAPLSDYERE"
     gene            24186..25079
                     /gene="ispA"
                     /locus_tag="PXF40_000228"
     CDS             24186..25079
                     /gene="ispA"
                     /locus_tag="PXF40_000228"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HDL5801608.1"
                     /translation="MSYLLATDLTHLQQRINHFLAEKLKTTDSVGSPLVEAMAYAVLL
                     GGKRVRPFLIYATGRMLGVPLEKLDHSAAAMEAIHAYSLVHDDLPAMDDDRLRRGKPT
                     CHIAFDEATAILAGDALQSFAFELLATDPHLTDREKVVQVTELATASGAKGMCLGQSL
                     DLIAENKAVSLEELELIHRNKTGALILSSVMMGLNLSEYSQNVAIKQPLVNYAKAIGL
                     AFQVQDDILDVIGETDKIGKIVGSDEHLNKSTYPKLLGLDGAKQKAEMLYQTALHSLE
                     QLPFDTTALKELANFIVKREN"
     gene            complement(25114..25914)
                     /locus_tag="PXF40_000229"
     CDS             complement(25114..25914)
                     /locus_tag="PXF40_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HDL5801609.1"
                     /translation="MCQLLGMNCNTPTDITFSFDGFRRRGGLTDHHTDGFGIAFFEGK
                     GVRVFRDNRPGASSPMAEAISQYQIKSLNVIAHIRKATRGDVNLENTHPFIRELWGEN
                     WVFAHNGTVEGVGVCEECHYQPIGTTDSEAAFCRIVSELKEMYPAKPSEKEIFDAVVQ
                     ITSRIAEHGVFNFVLSNGHWMIARCTTNLHYVCRKAPFGKALRDDDVSIDFSQYTKIT
                     DKVTIIATQPLTKNENWTKMKNGGYVFFKDGDVVYEIEGTLPEAQPHV"
     gene            complement(26039..26824)
                     /gene="znuB"
                     /locus_tag="PXF40_000230"
     CDS             complement(26039..26824)
                     /gene="znuB"
                     /locus_tag="PXF40_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HDL5801610.1"
                     /translation="MFDILFPAWLAGVLLAFITAPLGAFVVWRKMAYFGDTLSHSALL
                     GVALGIFLELDPYLAVIGMTILLALLLVWLEQKTNYSVDTVLGIIAHTSLSLGVITIS
                     LLDNVRVDLMSYLFGDLLAINFSDVVFIGIGATLICLILMLFWKRLLSITISPELAQI
                     EGLNVARLRLLLMILTALTIALSMKFVGALIITSLLIIPSATARRFAKTPEKMVLIAI
                     FFSIIAVSGGLLLSSWKDTPAGPSVVICAGLIFLLSLFKKEYH"
     gene            complement(26911..28248)
                     /locus_tag="PXF40_000231"
     CDS             complement(26911..28248)
                     /locus_tag="PXF40_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000067755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HDL5801611.1"
                     /translation="MSSLSFDFSEDFRPLAAKMRPRNLAEYVGQSHLIGEGKPLRRAI
                     EAGHSHSMIFWGPPGTGKTTLAEIIAHHLDAEVERISAVTSGVKEIREVIEQAKLNRQ
                     AGRRTLLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPSFELNNALLSRARIYI
                     LKPLQAVEILKILQMAIADTERGLGNETLVLEDDVLALLADYVNGDARFALNCLELMV
                     DMAQDSAKGKVLNKSLLTEVLGERQARFDKGGDRYYDLISALHKSIRGSSADGALYWY
                     ARILTAGGDPLYVARRLLAIASEDIGNADPRAMQIAIVAWDCFTRVGAYEGERAIAQA
                     IIYLAVAPKSNAVYQAFNEAKRLAKEAKDYDVPAHLRNAPTQLMKSLGYGEEYRYAHN
                     EPNAYAAGENYFPPELKDTEFYFPSERGMEKQIKEKMAWLKAQDQASPIQRYK"
     gene            complement(28258..28746)
                     /gene="mreD"
                     /locus_tag="PXF40_000232"
     CDS             complement(28258..28746)
                     /gene="mreD"
                     /locus_tag="PXF40_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HDL5801612.1"
                     /translation="MRTNPIFQILVIIAIFVVAFVLEIMPWPVGFQGLRPTWVVLVLI
                     YWALALPDKMSVGTAFIAGIVWDLILGSILGIHALVLSVAIYFVAKYHLILRNLSLWL
                     QSLLVMAYIVLIRFFIFVIEYILHSAEFNSQELLGAVISGVLWSWIFLLMRHIRRQLR
                     LR"
     gene            complement(28746..29801)
                     /gene="mreC"
                     /locus_tag="PXF40_000233"
     CDS             complement(28746..29801)
                     /gene="mreC"
                     /locus_tag="PXF40_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HDL5801613.1"
                     /translation="MKPIFAKAPSLGMRLIIAVIFSIMLIISDGRSSLMIQARNLLET
                     AVSGLYYFANTPRSILDGVSGNFIDNNKLQLENNLLKEQLREKSADLLLLDQLKVENQ
                     RLRLLLSSPLRQDEYKKIAEVLAAEMDAYRQQVVINQGRLDGAFVGQPIIDERGVVGQ
                     VISVGEKSSRVLLLSDITHAIPVQVLRNDVRGIASGTGVNNELVIDNLPRSIDVVKGD
                     VLVTSGLGGRFPEGYPVAIVETVENDTKSQFARIVARPLASFDRLRYLLLLWPTAEEK
                     NYSQSLSPAQVREVVEERRNSVNPFERLKQMSNKKTEVQLEAKEEQIENDEINENPAA
                     QPEAENEQNYHTEEGAE"
     gene            complement(29903..30955)
                     /locus_tag="PXF40_000234"
     CDS             complement(29903..30955)
                     /locus_tag="PXF40_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HDL5801614.1"
                     /translation="MFKKFLGLFSNDLSIDLGTANTLVYVKGQGIVLDEPSVVAVRQD
                     RMGSLKSIAAVGSHAKLMLGRTPKSIMAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPAGATQVERRAIKESAIGAGAREVYLIEEPMAAAIGAGLPVHEAMG
                     SMVIDIGGGTTEVAVLSLNGIVYSTSVRIGGDKLDEAIIAYVRRHFGSAIGEATAERI
                     KQEIASAKIESDDDVKTMEVHGHNLAEGAPRTFELNSRHVLEAIEQPLNGIVEAVKSV
                     LEQCPPELAADIFERGMVLTGGGALLHNLDRLLSDSTGVQVVVAEDPLTCVARGGGKA
                     LEMIDMHGGDVFSIDD"
     gene            complement(31070..31699)
                     /locus_tag="PXF40_000235"
     CDS             complement(31070..31699)
                     /locus_tag="PXF40_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid transporter"
                     /protein_id="HDL5801615.1"
                     /translation="MDIFIQGFIVCFGLIVSIGAQNAFLLKQGILKQHIFWIALLCFL
                     GDVFLMTIGVLGLGTLIAELPVVSFIISLLGAIFLLSYGSRSFISVFKSGEYLVASGE
                     NATSLKKALLITFAITFLNPHVYIDTVVIVGSIGGKLDFNGKIYFLAGALLCSFIWFF
                     GIGYGASLLSPYFAKRRTWQILDAVTGLIMYFIAFSLLIYTYQLALQIF"
     gene            31803..32450
                     /gene="udk"
                     /locus_tag="PXF40_000236"
     CDS             31803..32450
                     /gene="udk"
                     /locus_tag="PXF40_000236"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HDL5801616.1"
                     /translation="MTDTSQTSSCVVIAIAGASASGKSLIASTIYKELKNELGTDNIG
                     IISEDAYYRDQSHLTMEERIKTNYDHPNSMDHHLLVEHLRQLKQGNAIEIPEYDYTEH
                     NRKTTTKHFEPKKIIILEGILLLTDENIRNEINVSIFVDAPLDICFIRRLQRDMVERG
                     RSMESVISQYRKTVRPMFLQFIEPSKQYADIIVPKGGKNRIAIDILKAQIKQLLK"
     gene            32465..33046
                     /gene="dcd"
                     /locus_tag="PXF40_000237"
     CDS             32465..33046
                     /gene="dcd"
                     /locus_tag="PXF40_000237"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HDL5801617.1"
                     /translation="MRLCDTDIKRYLDEGIIAITPRPSDDKISGATADVRLGNSFRVF
                     REHKTPYIDLSGPREEVAAQLNKVMSDEIIIGDDEAFFLHPGDLALATTLESVSLPAN
                     IVGWLDGRSSLARLGLMVHVTAHRIDPGWEGKIVLEFFNAGKLPLALRPNMAIGALSF
                     EILSGDAAKPYNARKDAKYKNQQSAISSRINQD"
     gene            33124..33279
                     /locus_tag="PXF40_000238"
     CDS             33124..33279
                     /locus_tag="PXF40_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009041538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HDL5801618.1"
                     /translation="MLHYAVVFFVIAIIAALLGFGGIAGSATEIAKILFFVFLILTVI
                     SFFFKKK"
     gene            complement(33408..34010)
                     /locus_tag="PXF40_000239"
     CDS             complement(33408..34010)
                     /locus_tag="PXF40_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5801619.1"
                     /translation="METLIEFFSSYGYWAVFLVLLACGFGVPIPEDITLVSGGVISGL
                     GYTNVHWMLVVSMLGVLVGDSTMYWLGRIYGEKILKFPLIRNVATPERFATVQERFEK
                     QGWKLLFMARFLPGLRAVVYLVSGITRKVSFVKFLLVDFCAAIISVPIWVYLGDYGAS
                     NLDWLKEQVANGQHLIFAILGIVILFLGWKWYKNKKQYKK"
     gene            complement(34012..35031)
                     /gene="purR"
                     /locus_tag="PXF40_000240"
     CDS             complement(34012..35031)
                     /gene="purR"
                     /locus_tag="PXF40_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HDL5801620.1"
                     /translation="MATIKDVAKYAGVSTTTVSHVINKTRFVAEDTTKAVWEAIKALN
                     YSPSAVARSLKINTTKSIGMIITTSESPFFAEIVLAVEEFCYSKGYSLFLCNTQNKLE
                     KIQNHLDMLIKKRVDGILVMCSEYTANSFDIFENSNIPMVIMDWGRSDERSDIILDHG
                     VEGGYIATQHLIENGHQDIAVITGNRDKEIARTRFEGFKKALSEAGLSIREEWIQEGD
                     FEPEGGYECMNNLLKSSEKLPTAVFCFNDSMALGAISAITEKGLNVPQDISVIGYDNV
                     HSSRFYAPPLTTIHQSKSRLGSAALELLLERIEDNENAKEPKVLEFFPELVKRKSVRN
                     LNIKE"
     gene            complement(35167..35895)
                     /gene="cmoA"
                     /locus_tag="PXF40_000241"
     CDS             complement(35167..35895)
                     /gene="cmoA"
                     /locus_tag="PXF40_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HDL5801621.1"
                     /translation="MQRDTLFSAPIEKLGDFTFDESVAEVFPDMIQRSVPGYSNIITA
                     IGMLAERFVTDNSNVYDLGCSRGAGILSIRRNVNAKNVQIIGVDNSQPMVERCKTHLS
                     AYHSEIPVTILLDDIRHIEIKNASMVVLNFTLQFLPREDRLALLQKIYQGLNSNGILV
                     LSEKFTFESEEMNELLIDLHHTFKRANGYSELEVSQKRNALENVMRTDSIETHKKRLQ
                     EAGFTQVELWFQCFNFGSMIAIKA"
     gene            complement(35905..36687)
                     /locus_tag="PXF40_000242"
     CDS             complement(35905..36687)
                     /locus_tag="PXF40_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5801622.1"
                     /translation="MTEKSQLNFNYQPSNNHANAQTMIFLHGLFGDLNNLGAIAKPFA
                     ERYSILMVDLRNHGRSFHSDEMNYALIAQDLAQLLTELNIQNAIVVGHSMGGKSAMAL
                     AAFAPELVEKLVVIDIAPVTYTQNRHQQVMAALFAVKEAKPQNRQQAKAIMAEYIRDE
                     GVQQFMLKSFDAQSEQSFRFNLQALKDNYQNVMGWQQVFVDKPTLFIKGALSDYIQAE
                     HTQTILAQFPQAKSFIVANADHWVHAEKTGTVVRAINKFLEK"
     gene            36806..37372
                     /gene="seqA"
                     /locus_tag="PXF40_000243"
     CDS             36806..37372
                     /gene="seqA"
                     /locus_tag="PXF40_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HDL5801623.1"
                     /translation="MKRIEIDDELYQYIASRTQSIGETASDILRRLLRLPQSPQPFVL
                     VQEHMINELKELVKTPSRATKKNESNAEKTVEKLENILNSEHFMNENKNVVRFTMLLA
                     ALYRANPEAFAKATEKVRGNERIYFSQSEAEILATGSGVKAKQIPDSPFWVITNNNTA
                     RKGLILKGVMESMKVPSQLIERIQALFI"
     gene            37382..38800
                     /gene="menE"
                     /locus_tag="PXF40_000244"
     CDS             37382..38800
                     /gene="menE"
                     /locus_tag="PXF40_000244"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HDL5801624.1"
                     /translation="MLINSTRFPTQFWAAHSAQNVAIIWEKGTSDYLNHLPSNITWYS
                     LNQLIAQAIFVLQQQGATPHSLIAYCGSHRLIGLLTYCASLALGAKILMLNPAQTASQ
                     RQAVLDDNGVELIINDADFAKFSAKTTACNAFPTIDFEKPATLTLTSGSSGKPKAVVH
                     SIAAHLYSAEGVCELMAFEQPNSWLLSLPLFHVSGQGIIWRWLFKGATLYVHEDKSDF
                     FLSAQKVSHLSLVPTQLQRYLNQLDSMVSQKCLLGGSMLPAELIAQAQQSGMTTFSGY
                     GMTEMASTICAVENDLNSVGFPLKHRELKLENGEIWVKGKSLGLGYWQKNGQIRPLVN
                     TQGWFATKDRGEWNHKKQLVIKGRLDNMFISGGENIQPEEIEQLIFRSQLVEQIIVLP
                     IEDKQFGHRPVAFLQFKQSDSKNELHKLKIWLSDKLERFKQPVAYYLLDIEKYQKQGL
                     IKLSRTQLQQDLKLKVLKEIYV"
     gene            38793..42170
                     /gene="mscK"
                     /locus_tag="PXF40_000245"
     CDS             38793..42170
                     /gene="mscK"
                     /locus_tag="PXF40_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HDL5801625.1"
                     /translation="MFRPILKTFVLSLGLMLNSYALAELPTQQVVQTQLDSAKKLDQA
                     DADNKALVQTLEDTLAFLAQIDKQKADNQALNKSIQDSQKALKTSQHNLEKLKEVTIA
                     SVDNLTQKATTDLQKELTSTQSQLETVQHDLSIINNNLVAQNTAPDKAQTALTEMVKR
                     KQEISSQLSATNIKNELQTKLEVELELIELKNTYNQILLGGSEDLSALYSAQLDEKKQ
                     EQQNLQAEIANLQTAINNKIVEESQNKLDQAQAVQNQQNNATTNPVILRELDINTKVT
                     QELLKQTKDMTQLSQDNLRIKSVLDNLQQTQRNIEEQISSLQGTLVLSRIINKQKQSL
                     PQDEMISGLSKQIADLRVRVFDITEFKDSFADINAYISRIEQDEKTTFTSKEKEQLSK
                     ILQERSDTLTEMIKSLNNQLNLLINIELNQQQVQTISDALQQKLQQQSFWVKSNNPID
                     LEWFSKFVDITHYQFIDIGKKLNFSNWRDNLLPASILVGILLLLAIFINRQKDKIKQK
                     LHQINNRLKIVATDSQWNTPLAIFWTLVLCLPSTLMFLAGFVAITYISFENPQEVWTW
                     GLKMAIYWLYFAFLVAMLRPHGIGHIHFNMPQKSNEIFRNILKRSVWIIALLLNTSIF
                     TNLEMGISYDMLGQTMTIFVLILMIWMIVPAFRQAISTYENVTTEEKKESKSILLTIV
                     KLVLLLAPIILIILIALGYYYTALVIIEHLVDSYFAIITWIIIRNILYRAFSISSRRL
                     AYRRLQEKREAAEAKTRAKAEQNDENPDGVELPFELKEDSIAVSEVKNQMLKLTDFVL
                     WIGLFVLLYWVWSDLITVALYLDGVTLWQQSVTTEAGIVMESITLLNLLTAILIIVVM
                     VVLIRNLSGLLEALIFSHFKLSQGTPYTITTLLTYLIIALGAIFAFGTLGMSWSKLQW
                     LLTALSVGLGFGMQEIFANFVSGIIILFERPMRIGDTITIGTYSGTVSKIRIRATTLV
                     DFDGKEVIVPNKAFVTERLVNWALSSTATRIIVQVGVAYGSDLELVKRLLLQVAEENP
                     KVLKDPQPRAYFLTFGASTLDHELRAYVNDLSDRNPTIDALNTRIHQLFNEHNIDIAF
                     NQLDVYIKNNDTQDEIKVDSKRFEFERPNNITAKEKE"
     gene            42173..43255
                     /gene="aroC"
                     /locus_tag="PXF40_000246"
     CDS             42173..43255
                     /gene="aroC"
                     /locus_tag="PXF40_000246"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HDL5801626.1"
                     /translation="MAGNSIGQLFKVTTFGESHGIALGCIVDGVPPNMALSEADLQPD
                     LDRRKPGTSRYTTPRREDDEVQILSGVFEGKTTGTSIGLIIKNGDQRSQDYGDIAEKF
                     RPGHADYTYQQKYGIRDYRGGGRSSARETAMRVAAGAIAKKYLREQFGIEVRGYLSQI
                     GNIKIDPKTVENIEQIDWHAVNSNPFFCPDPVAIEGFDALIRELKKEGDSVGAKLTVI
                     AERVPVGLGEPVFDRLDADLAHALMSINAVKAVEIGDGFAVVEQRGSQHRDEMTPQGF
                     LSNHAGGILGGISSGQPIIAHIALKPTSSITIPGRSVNKNNEAVEVITKGRHDPCVGI
                     RAVPIAEAMMAIVLLDHLLRFKAQCR"
     gene            43274..44101
                     /gene="mepA"
                     /locus_tag="PXF40_000247"
     CDS             43274..44101
                     /gene="mepA"
                     /locus_tag="PXF40_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HDL5801627.1"
                     /translation="MKLLKTLLVSSLAFTATALNATQWEKIKTPVQGKAQSIGGYSNG
                     CIIGAQPLALKGEGYQVIRSARNRYYGHPQLLDYLTHLGKKTKAAGVPTILIGDMGMP
                     AGGRFASGHASHQTGLDADIWFKFGPMDDETARNPAGLATIMVNRSTERVDDSLWNQH
                     HTNLVKLAATDPRVDRIFVNPAIKVKLCQTAGNDRAWLRKIRPWYGHDSHFHVRLTCP
                     ADAASCENQALVPAGDGCGEELYSWFEPKEASGTPKAKVLPTAPVQCQMILSEQGLN"
     gene            44174..46093
                     /locus_tag="PXF40_000248"
     CDS             44174..46093
                     /locus_tag="PXF40_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5801628.1"
                     /translation="MRLFVAEKPSLARAIADVLPKPHTKGDGFIQCGEHDTVTWCIGH
                     LLEQAEPDVYDERFKMWRMEHLPIVPEQWKLIPKKETLKQFKVVEKLIKKADVLVNAG
                     DPDREGQLLVDEVFGYLNLSAERKSQIQRCLVSDLNPNAVSRAIEKLQKNSDFIPLAT
                     SALARARADWLYGINMTRAYTLQGRWAGYKGVLSVGRVQTPVLGLIVRRDLEIEHFVP
                     KDYFEVLAQIVVPETQERFKAQWQPSKACEDYQDEDGRVLSRPLAENVVKRITDQPAT
                     VTEYQNKIEKETAPLPYSLSVLQMEAAGRYGLSAQAVLDICQKLYETHKLITYPRSDN
                     RYLPTEHFNDRFKVMAAIAHHLPEYQQKPEVIDATIRNRCWNDKEVEAHHAIIPTARQ
                     GTVHLTENEKRVYQLIARQYLMQFCPDAEYRKSKIGLEIAGGSFVAQARNLVIAGWRA
                     LLGKEDSLDDAEPLLPIVKKGQILHCEKGEIVSKKTQPPRHFTDRSLLSAMTGIARFV
                     QDKELKKILRETDGLGTEATRAGIIELLFKRGFLIRKGKNIHSTEAGRILIQALPDSA
                     TQPDMTAHWEMQLNQISKKETSYQQFMFDLNQQLPHLLQSPNRQVLQNLAKITPLASG
                     NKPRYFKKRTQTAEN"
     gene            46199..46525
                     /gene="secG"
                     /locus_tag="PXF40_000249"
     CDS             46199..46525
                     /gene="secG"
                     /locus_tag="PXF40_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HDL5801629.1"
                     /translation="MLINVLTIVYLVVAVLLIAFVLMQQGKGADAGASFGAGASATVF
                     GSAGSANFLSRTTALLATIFFAISLVIGNLSSHNVAPKSQFEDLSQVEQKQVEPVKIE
                     NSDIPQ"
     gene            46550..46635
                     /locus_tag="PXF40_000250"
     tRNA            46550..46635
                     /locus_tag="PXF40_000250"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:46584..46586,aa:Leu,seq:gag)
     gene            46838..48079
                     /locus_tag="PXF40_000251"
     CDS             46838..48079
                     /locus_tag="PXF40_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5801630.1"
                     /translation="MARTTKALNKTQIENAKSKDKEYILSDGDGLNLRVKPLPKGSKI
                     WIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQQEAE
                     NRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKALV
                     DIYSKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTIEL
                     EELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKEKM
                     KGKADKKRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVNSTLKRN
                     GYKDRLTAHGIRAFVKTFLSSRKVDRHVSESILSHLLEGGDDLENTYNRYDFLEERVP
                     VMQLLGDYCEQCGMNLELVRG"
     gene            complement(48238..50106)
                     /locus_tag="PXF40_000252"
     CDS             complement(48238..50106)
                     /locus_tag="PXF40_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HDL5801631.1"
                     /translation="MFKKLLELRQQKAAIEAEMRSILTKADEEKRSTTEAEGAKFDEL
                     RSQAENLVKEIARYEAITDEQRNQPGQQVETANVKVSDDELRHWIKTGELRSLATNTN
                     GGADGGYSVIPELDKQVMKRLTDDSVMRQIANVVKLTQGKEYKKLVSAGGAAVNHIGE
                     GEARTETATPKMNEVTIAVHNIYAYPKTTQEILDFGGVDILGWLTEEISESFVETEET
                     DLTNGTGTKQAKGFLAYPRTTANDKTRPFGTLQKMEVQPATVIGWNSKGQPETLTPYP
                     PYSVNVQRTVNRQNWLTAYIPHSYDENVAETPHFDQWLNFVSDGKQDKAKNILAALYA
                     ILTNRYNWQVFFQVTGKGGSGKSVFAGIATLLAGEKNTASARLENFDDERKIAGLEDK
                     KLIICSEQTKYAGDGGGLKAITGGDMVRVDPKNKHPFNARIAAMIMIVNNDPCKWTER
                     NGGIDRRIVNFRFNKRPPENERDPYFMDKITLEIGGIIRKVLDTFPDPLEAKRALEEQ
                     KESLEALEIKKQSDPLTDFFEYLYTTENTDGLYIGTGNTLGHDKIRTHLYPAYLAFVK
                     AKNVLELGLNTFVVGIEQAVKQHGNKHDFTKRKTNKGQRTNVHFKNFDDFQSDILN"
     gene            complement(50117..50512)
                     /locus_tag="PXF40_000253"
     CDS             complement(50117..50512)
                     /locus_tag="PXF40_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801632.1"
                     /translation="MISNEAIRQEVIDLLQGNIQGIQHFHNGRAVFTDVENELPAIAV
                     FIDEAEYSQLTLCDGECNAYLKIGIYLPMFSTENDLDLVAQKISDVMNQATFHSMDEC
                     VLAKYSYDYDANESAWKTATLHYNINYLN"
BASE COUNT        15498 a        10609 c         9708 g        15115 t
ORIGIN      
        1 aatatcatat ataaatacta tcaaattaaa gatgttgtgt cgaaattaat gtaaaaaaag
       61 agaacccttt taaaataaag ggttctctat atttatatgg gttttatttt acagttttaa
      121 attatatgta actcagaacg gaatatcatc atcaaagtta tccattggta aatcttgtgg
      181 atgtgttgct tttggagatt ggctcatagc ttgatagtta gattgttgtc catctacgct
      241 atttgtagca ttacggctat ctaacatttg taatagttca ccttggattt cggttgtata
      301 acgctcttgc ccgttttggt cttgccactt acgtgtccgt aattttcctt cgatataaat
      361 tttagagcct ttacgtaggt actgaccaca aatttcagca taacggcgat aaaaaacgat
      421 acgatgccat tcagtgactt ctcgacgttc tccggtattt ttatccgtcc aactttcaga
      481 agttgccaca ctaatattag caactgcttc accattaggc atagtccgca tttcaggatc
      541 gttgccaaga ttaccgacaa taatcacttt attgattcct gccatcgtat ttactccttc
      601 aataaattaa gttagttcta ttaaacttga ttcagcctaa gaaaaaagta tttaattaaa
      661 atttggttag agtgaatttt tcatttttac gtgtgcaatc acttattcct ccgttgtaaa
      721 ggctttttct tcgtgaaggt aaggggcttg tacccttacc tttaaaaggc cttttaatgc
      781 aggatttaca aactgcactt tttcagggat tacaaaccgg attttcaggt attacaaact
      841 tgaatatgtc ctaattaacg gactgtttgt tttaccacgt cagcccaccg tggttggcgt
      901 ttacacacaa ccaatatagg agttgttata tataaattta ctacgaattt aagtctgatt
      961 tcgcaacggc attatctacc tctttcaact tttcagcaca atctgccaac tgtcgcaaaa
     1021 tatgattaaa caccgaaatc tgcatattaa tcaaaatcct gtctttttct actgcgacaa
     1081 cttttttcct cacctccact gggacagact tatcatctac aatcggctgc caaactgtgc
     1141 caccggttct ggcattttgc atactacgcc agcgtaaaaa tgtaccgcct gaggatgagg
     1201 ccttatcctt aatcatataa acagccaaag gtgaaagatc ctgccgcaca gactgcacca
     1261 tactatcctg tgcagccata aaataagccc gagcttgagt gaactgttct tgcaaaagtt
     1321 catagtctga gccagtgtca aaatggctaa atagctgttt cagagaagta ttcagcccag
     1381 aatctttgac taattgccga taaatttcat cagagatgag gttcatatca ctccttattt
     1441 ttgagattca tttgtctgtg ccgtgatatg ggtttctacg gattgctctt cttcaacagt
     1501 agtgttttgc ttgatgaagg gagcaaactc agcacgatgc tcaccggtaa gtacagcatc
     1561 tgagagtgta tagcccattc gttttatcgc agcttgatag cgagcattct tttcttgata
     1621 gtcccgacga gtgattcctg aactcttata acgctcaacg atcccaaaac atttccggat
     1681 taaccttgca ccagcttcaa tccaatcttg agcttctgca cgattgataa tcgcaatatg
     1741 agctgccgtc attactgaac ggcaaaggct atcaaaatca ccaagtaagt agagtaattg
     1801 ataccctagc tgtgaattaa cataaatcgg gtaagaaatc ggggaaatat tggcacagcg
     1861 ttcaatagaa attccctccg gcaacatttt ggcgtagagc gtgacaatgt cgttggtgag
     1921 cttttggatt tccttccgat aattgatcac actttcttca aattgaatca gataatcgtc
     1981 agcataagga tcatcttctg atgcagcccg ttgaatttgg gttagcattg caaagcaatt
     2041 tggtacgctg ataatggagg attgagttac tttgccttcc tcattacgaa tcattggtcg
     2101 ccccacccat aatttatggg catattgggt atgtaacgta aaagtgatct cactacgaag
     2161 tggaccaagt tgaggatcta attgagtggt catatatgct ccttgtttat ttgattattt
     2221 tttagtcttt ggaaaggggc tttccattgt ctgtttttta atctttgcag acactgccta
     2281 cgctgtttat tttttatcca ttgtgtacct ggtacacact gattattttt cactcactat
     2341 taagcccctt aacagtgatt gttttttaat cttattgtaa aagtaattca gctctaaact
     2401 tctgcatacg actagccatt tgctctctgt ctgctgaagt taagaccggt ttctcagtag
     2461 gctgctcagt cagtttttgt atagaatgag cagaattatt gttagcctga ttctgtgagg
     2521 gaagattttt tcctaattca aaatagtagg gtttaaattc accctgcttc gcccgctgga
     2581 taagcgtata gagataacct ttcggttttt tcacatcctg cttttgaata atgcgttgtt
     2641 gtacttccaa caaaatagct tggcataaac cgaggtctaa tcccttcatt gcctgtgcag
     2701 taagtttttg ttcaagtgaa gttaatggga tttcttgtgg ccaagtaatt tcgctcggtt
     2761 ccccagtaca gtacttatta atatataaag tacggtactg tacatctgac ttccctaatg
     2821 gaagtaagtc taaaatcaat gacttatctt catttttagc cctaactccc ttattggaag
     2881 tctggttttt agaggatttt ttcctgactt cctcatcaaa atccctaact tccatagtgg
     2941 aagttaggat gttttgttga attttgctta attcttgttc tgtttgcgat ggctgtttat
     3001 ctttcaccag ctgctgttgc tggtatatct gataacgact ttgtaaacag tctaaatgag
     3061 agacatagtg ccatttggtt ttgtctgtta ttagactttc aacaatatga tttgccacac
     3121 cattaataag gctatcttta tgtttggtgc atttatctaa aaaagagaga tagtcgctat
     3181 ttaattgaat tgcatctaaa attggcacag gttcatcatg taggatataa acattacctt
     3241 gtacataacc tcgctcatca cgcactgttt cacataaagt aagccagcga gtaagacgga
     3301 gtaaatagag tgtttgagtc acgacttttt ccgataattt agcctccgca taaggtctat
     3361 cggataacat tttgctgagc gtctcataag agggaaataa tcctccttga aaggcttgaa
     3421 cattgcactt aatgagctgc caagcaaact ttgctcttgg tgtaaggcag ggatcttgta
     3481 ataatcgagt agggactgtt tcgtgttggt tgccaaaaaa tagcaatcca tgctctgttg
     3541 gcttattcgt gctgctaaac attgtttctc tccaccagga taaaagagtt tttctcttgc
     3601 tattctctct cctatggcta taatgcacgg gacttctgca aagtccttgt aattcataag
     3661 atagagatac aagactcaat atcgaatgcc ccaaagctcc aacttcgggg catttatttt
     3721 ttacttatgt tttgaatacc attcggaaac cagtttccaa acaaccgtta gattcatatt
     3781 gccttcctca gcaatcagac atagaagctc taatccttct tgtgaatcta ggatttccat
     3841 tcgttgtttg tatctttgcc aaatttccca aatatgggta gattcttcat cacttgctgc
     3901 cgcttttcgt cccatttttt cttcgatacc gagtaattga cggcgagccg agacttcaga
     3961 ggttgataaa ccaaaatact ggtgcaacat ttcaatagag gctccgagca ataatgctcg
     4021 gtcaataatt tgtcgctgtt gagtattggc ttgtgcaata gccagtaatt tccaaaaggt
     4081 ttcgtgatta atctccacct tagcaaaaga gacaacggag ttgctaatat ccataatttc
     4141 atcaatactg agattattga tcgcttttag ttgctcctca gaaaatccca tttttagaca
     4201 aggatggata tttccctctt taatattgag cagggcgtta ccaatcaatg cttcatttac
     4261 ggtaatcggc ttaatcattt tctcctcctt gttggcgaat atggcgactg acccgaatga
     4321 gacggaaaat tttgactaag gtaagatcat caagctcaaa caggaatttg gaatctaaga
     4381 cacagctatt ttcatcttta tgttcagcag tctgtaacat tgagaggaat gagtagagtg
     4441 ttaaagcaga cggtgaaagt tcagtatctg ccggtttcat tgcataagtg taatccactg
     4501 gttgtttcac aatatgttca accagatggt caatgcccat actttcggca atatctaagg
     4561 ccagtgagta ggcctctgag cgatattgac gtgcggggtg aatcaaccaa atatcttcaa
     4621 ccggttggcg accttcacaa gcaaaagtca gtccattcgc ttcagctcgt tgctctcgct
     4681 gttcttgaat actcattccc ggagtgagtc caaagttatg ggcaatttgg gatagataat
     4741 cttcttgatt atcttggtta tcgagcaatg aagagccaag ctgagataaa tcagtaatag
     4801 cgttattctg ctcatcatca ctttcgttat catcaattac ctcatcaata atatgttgag
     4861 ctttttgggg agtaacggct ttattttcat ttttgatgag aggttcagat tttgcagttt
     4921 gttgttcctg tctggtattg atttgatcga ctgttttttc aactaaatta tcaatttctt
     4981 gttgtttagc cgctattttt ttgaattttt gttcatctaa gtcaatatcc agataaagtg
     5041 tttcaaaact cactttaccc tctaaagctt caaccattgc cgtaatcaat tcactttgga
     5101 attcttttgc ttgaaatggt gtagcctcat taaatttgga taaattttct gaccagagcg
     5161 attcaaaagt aacatcagta tcaaattgat gggctgccca tacctcttca gcattattac
     5221 gaatagctaa tagtttatcg atctgtgtat gaccaagacc actaaaaaga acttctggta
     5281 tatgtggata taagtaatta acacaacgtt ccattttaag aatgagagca tgagagataa
     5341 tatatccatc attttctaac tcagaagata actctctcga agaaagagac ttacctaatt
     5401 ttttctcgta atactccttc gcctgcaaaa tccccaatgc tttttcaata aatgacaaat
     5461 ccgcacgggt atcattttca atcaaatgcc cgataagtaa attgagttca gcttcgacac
     5521 tgtcggcagt atcaccttgc caaggtttat attgacaact gatggaccaa aattttggat
     5581 ctttggtctc ggtaaagagc tccttgagtg cctgaatacg agtattacca ccgtcagcga
     5641 taatatagaa atcttctccc ggacgacggg tgatattcgg cttatgatct aaccctcgac
     5701 gacgaataga ctctttgatc atctcaaagt tagggttacg ggttttccga gggttatgct
     5761 catacggacg caacttatcc agcgttactg taatatattc aacatcgcta ctgtaatgcg
     5821 ttggtgtggc tgtttggtag gatggagccg tatttgaaat aggtgaaaca tttaatcctt
     5881 ttgctatcgc tgccagtctt ttttcatctt ttgtcataat ctatcctaat gcgttgtgtt
     5941 tgttctgttt tcaaataggg caaattcact tctgaaattc gtcattacgg aagtaagtgg
     6001 tccgtttctt tgcttgccga taatgatttc agcagtgcct ttaaacggag aatccgcatc
     6061 ataaacttca tctcggtaga tgaataaaat gacatcggca tcttgctcaa gtgagccgga
     6121 ttcccgtaaa tcagagttga tcgggcgttt attggcacgt tgttccacag accggttcag
     6181 ctgagagagg gcataaaccg gacaatccat ctcttttgcc agtaatttga gtgaacgaga
     6241 gatgttggca atttctaaat tgcgattttc ataacgttgc gaggtttgca ttaactgaat
     6301 gtaatcaatg aaaatagctg ccggtttgcc atatttacga gcattttgtc gaactttagt
     6361 gcgtaatttt tgaggcgtga gactaccttc atcatcaata actaaacgat ttttccaatg
     6421 ttctaggata tagcccattg ctgaggttag ttttgaccat tcctcatcat ccaaactgtc
     6481 tgcctgtcta atattttgca atcccactct ggcacgcata gctagaaaac gttgtaaaat
     6541 ctgatctgcc ggcatttcca tgctgtgata gaacacagga gccgactcga attttttaag
     6601 tgtatggtaa gcgatagttt gagaaaatgc ggtttttccc atagaagggc gggcaccaat
     6661 cacgattaaa tcgcctggct gtccacctgt tgtcgcttcg tcaatacctt gaataccagt
     6721 tggagtacct gtcacaggat ctccattttt agccgagagt tccatacgag agagcatatt
     6781 ggcaaaaata tcacttaaat ctgctgcaga ttttgtatta tctgataggc taaactcagt
     6841 aatttttttc tcaatgtcat caacaacagc ttcaaactta tctggcgttt tcgcactctg
     6901 tgtctgatca acaataaact gccccagttt taaaagctgt cgctgtttac tatataagag
     6961 aacgatatcc gtataagcgt ggatattagc tgtagatgga gtgtttttga ctatttctgc
     7021 aagataagca aatccgccca aatcctcgat cacttttttc tgggtaaggt attgatccaa
     7081 tgtcaatata tctgctggtt taccggcttc aatcaattcg gaaatatgct taaacagtag
     7141 acggtgagta aaattataaa aatccccctc attgattttg ctactcactt catcaaagag
     7201 ttcattatcc aagagtaatc caccgattac tgaaaattca gcctctatag aatgcggctg
     7261 tacaagtgat ttatttaagc tagacataca ttctccctct atgctgagaa gtgagagttt
     7321 gcaaactgtg gcatcagtaa cgcacaaagc tgactgatcg tttcatattc agcttggctc
     7381 tgacgataga ccggttttga aaaagttgcc gcttcacgat atgccacgcg gtcaggtacc
     7441 gaaaattcca gcaatgtttt gttttcatca aactcatttt ggaagagagt atgaaggtag
     7501 tcggaaacca atttgacatc tttagtgtga tcaacacagt taatcatcgc tttcagcggt
     7561 ggtagggtaa agccaaatgc cgtaaaggtt tcgaggtctt gatacattcc aatcgtgcca
     7621 cgaataaact ccttagcaga taaaatgtgg ggaagaatag gacagaataa aacatctgct
     7681 gccaatacag acatatcgac agtaatatct ctggtaccac gagtgtcaat aatgatgaca
     7741 tcgtaacctt caattttctg gagcagtaaa ctaaaacgta atgcaccgtc aggtgaatct
     7801 ctcagcattg ggctgatttt atttgacggg tcattagact ggatcaagtc aagatttggg
     7861 atagtcgttc tagaaataat gtgggtagga tctacatctt taaaatgcag aaattcgtaa
     7921 gttccaccgg gagcttgata ttccaactca taataagagc ttaatgtggg ttgggtatcg
     7981 gtatcaataa gaagggttct tagaccgtgt tctgcacaga atgcaccaat gttagcagca
     8041 ttcgtactct tggcagagcc acctttagtt gaagcaatag taatggtaaa aggtttgttt
     8101 gtaccgtttt gtaatggttt cataatttac tctcttaaca agggttaagg agtattggcc
     8161 attaatacgg tgtatttgaa ttgattattt gaaagagaga aactacaagt gtgattcaaa
     8221 tggtgcctga ggtcggactc gaaccgacac ggttattcac caacggattt tgaatccgtc
     8281 atgtctacca atttcatcac tcaggctaag agtgcttttt attcaatcgc ctgtatgtcc
     8341 tatcagttta cgcataagat tttgaatccg ctgcgtctac cgatttcgcc acactggctt
     8401 aatttttgca cgattatagg gaaatatgac cgcttgtgca agcgtaaaaa tgccttttga
     8461 aatcggttga tttaaaaatc agcactcaat tcatctttac aaaaatagtt atgcacatca
     8521 cctgtggata actaagtgaa caaccctgtt tataaatatt taacctactg attttactat
     8581 aaataatttt aaaaattggc agcgttcaaa atttccccta caaaaaatcc actacttgac
     8641 ttattatttt tcctgttttt agttgggtga taatagcctc accacgttca atattttctg
     8701 ttgaagtaag cgttttaccg tctttagttt gggtaattga gtagcctctg gtcaagattt
     8761 tcaatgggct aagtccatca agtttagtgc ataactcttg aaaatgtcgc tgctctttca
     8821 gcattatttt ttcgatagaa taagccaagc gttgcgacat ttttgccacc atcgtttgtt
     8881 gctgataaag ttgataaggt agcgggttgc gttcaaaccg ttgcgtaatg tttttccatt
     8941 tttgctgttt tttgctgagt tgctgctcca tttgccaatg gagtttcagc tccaattgct
     9001 taagcatttg ggattggcgt tcaatctgct tttgcggatg ttggtgaatt aaacggacat
     9061 ttagctcttt ccccacctgc tttttggctg caacaagtgc ataaattgcc tgctcgaggc
     9121 ggtattccat ataatcaaaa cgttgctgtt gcgattgaat ttgtttgctt ggatgctgag
     9181 cattcaggcg taaggggagt tgttggaaac ggttaaattt atggttccaa actcggtcaa
     9241 aggctaaatt cactttatca aactgatgtt gtaattggcg tttcaattca ttttgatctc
     9301 tgctgactaa ttccgcagca gccgaaggcg ttggtgcgcg caaatctgca acaaaatcag
     9361 caatggtcac atcggtttcg tgtcccaccg cactgataat cgggatttgt gaatgataaa
     9421 tggcataagc gacactctct tcgttgaaac accataaatc ctctaatgaa ccgccacctc
     9481 gcccgacaat taatacatca cactcattgc ggcggtttgc cagttcaatc atattcacaa
     9541 tatcttgcgt tgcttctttg ccttgcacga gagccgggta aataaccact gataagctcg
     9601 gatctcgtcg ttgcaaaata tgtaaaatat cttgtaatgc ggctccgctt gaggaggtaa
     9661 taataccaac ggttttaaca aaagtaggaa ttggcttttt atgctcttga gcaaacaagc
     9721 cttgagctga aagttttgct ttaagttgct caaattgctg ctgtaacaag ccttcgcccg
     9781 ccggttgcat actctcaata atgagctgat agtcacctcg tggctcatag agtgtaacac
     9841 ttgcccgcac cagcacctgc ataccgtttt gtgggcgaaa attcactctt acatttttca
     9901 ttttaaacat cgcacaacgc acttgtgctt tgtcatcttt taaagtgaga taccaatgcc
     9961 ccgaaactgg ttggctgaaa tttgagattt cgccggttag ccaaatatgg ctcatttcca
    10021 tttcgagcaa atggcggacg gaatagttga gttgggtaac agttaaaata ttgctcataa
    10081 taatcaaaaa agcgtaaatg tagtagaagt gtaacgagaa atgaaagcga gaggaagctt
    10141 ttgcagtcaa caagcggtta ttttttgctg ttttttggca aataaaacga aaaccctcga
    10201 tgtgattcac tatcgagggt ttggaatgtg gttgcggggg ccggatttga accagcgacc
    10261 ttcgggttat gagcccgacg agctaccaag ctgctccacc ccgcgtctga tgaggctata
    10321 atatatcaat ttgacataat gacaagtaaa atcatacaaa attgctctaa gtgatgtaaa
    10381 ttacaacaga tatagtatca aaatacgctt attgttgtaa aaacaatcaa attatattct
    10441 ggttttattt tgtcgctgtt tttgctattc ttctgtttat ttttcacatt ttattaacga
    10501 tataaggata ttcgatgaat tggaaagcat ataaaaaagc tattgcggca gctagcgtgg
    10561 tagcgattgc aacggtatta gtggcgtgtt cgtcttcagg ccaaaaaggc aaaacaacct
    10621 cttatgatgc ggaaaaagct aaatttggag caaaatataa tggtcgtcac tttatgcctt
    10681 atggcacaca ttttcaagct ggacgtttag gattaaatgc tgctcctgtt aatcaactag
    10741 actttttaca gcagctttct aatgtcagag cctatagtag cttggcagat tcttatgcta
    10801 tcgcttacgg aaaaatcagt cgttggatct catcgggcgg taatattaat gatttagcaa
    10861 aatatggtat tagtactcgt ttaatgcgtg gcgaagatgg ctaccagaat gtgttaatga
    10921 cagggtatta ctcgccggtt atcaaagccc gtataacgcc tcaggggcaa taccaacacc
    10981 cgatttatgc gatgccgtct agcaaacgtt tttcacgggc ggaaatttac gcaggagcat
    11041 tgcaaggtca gggcttagaa ctggcttata gtaattcaat gctcgataac ttcttattag
    11101 gtgttcaagg tagcggttac gttgactttg gtgatggtcg cttaaactat tttgcttatg
    11161 cagggcaaaa tggctttaaa tatgccagcg ttgggcgttt attagtagaa gatggcgaaa
    11221 ttccgaaaga gaaaatgtca gtgcaggcta tccgtgaatg ggggcaacgt aaccctagcc
    11281 gtgttcaagg tttgttggag cgtaatccat cgtatgtttt ctttaaaaac gatcctaccg
    11341 gtcaggtaaa aggctctgcc ggtgtgccgt tagtaccact tgcatctgtt gcatcagatc
    11401 gtagcattgt gccatcaggt agcgtgttgt tggtcgaaat gccgttgatt gatagcaaag
    11461 gaaattggac cggcaaacac gaaatgcgtt taatggtggc tcttgatgtt ggcggtgcag
    11521 tgaaaggcca tcacttcgat ttatatcaag ggattggcga taaagcaggc catatcgcag
    11581 gtttaatgaa acattacggc cgtgtttggg tattaaatta atacagggta actatgttaa
    11641 aaaaactatc tgccatattc ttacttctac cgagcgccgt gcttgcaaat aatttgcaaa
    11701 atataaccgc ttcaactgag cctaaatata aaatctcaga aatagatgtc agaattttga
    11761 tacgccagct caataatatt gagcaatgta tctatcctga gttagctaaa cccggttacc
    11821 agcaaatcta cgcaaattgg aatctggctg aaaatttaac gatgcaatat tttgaatatc
    11881 agcttctaaa agagttgctc ggagaggaaa atcagaaact gatgcaaaat gatacgcttt
    11941 ctaccgagta tttccattta ctgcattctc gtttaaatca ccaaaaagca aatgtagatc
    12001 ccgaaaaatg cgatacattt aaacctagat ataaagagat ttataaaagt atggaaaatg
    12061 cactcactaa gaaaaatcaa tagtaaaaaa ctcgcagttt tcactgcgag tttcttttat
    12121 ctttcgttat gaatttctaa attggtggct tgttttgccg cctctgcttt tgctttatcg
    12181 tttcgagatc ttgctatact gtctaaatag catttatcta catcacctgt aatatattct
    12241 cctgtaaata cagagtcatc aaagcgatga atagtcggat tttccagttg aatagactta
    12301 taaagtgctt caaggtcttg gaaaatcaat ttatccaccc ctatcatctg tgcaacctct
    12361 tccactgagc gatcataagc cactaattct tcacaagtcg gcatatcaat gccatacaca
    12421 ttcgggtagc gaatttccgg tgcggcagag gcaaaataaa cccgttttgc accagctgct
    12481 cgtgccattt ccacgatttg ttcagacgtt gtacctcgta caatagaatc atcaaccagt
    12541 aacacgcttt tgcctttaaa ttcagaggca atcgcattta atttacggcg aaccgagctt
    12601 ttacgctgtg cttgccccgg cataataaaa gttcgagcta catagcggtt tttaacaaac
    12661 ccttgacgat agggtttata caacatatta gcaatacgta ccgcaatatc atttgaggtt
    12721 tcaggaatcg ggatcaccac atcaatatca tcgataattc gtccccattc acgtttaatt
    12781 ttctcaccta ataattcgcc catatgcact cgtgcagaat atacagaaac gccatcaatg
    12841 acggaatcag gacgggcaaa ataaacatat tcaaaaatac aaggattcag ttttggatta
    12901 tcggcacaaa tttgcgaatg taattgccca tcaaaggtaa cataaatcgc ttcacccggc
    12961 agcacatctc gcacaaattc aaaccccact acatcaagag ccacactttc cgaagcaaac
    13021 atatattcgg ttttaccctc gatttcacgt ttacccagca ctaacgggcg aataccgaat
    13081 gggtcacgga aagcaaccat accgtgtccg ataatcatcg caatgcaagc ataagcacca
    13141 cgaatgctat cattggtttt acgaaccgtt tcaaagatat tgtctgggct taaatgctga
    13201 gtggaataga gatctaaaaa gtaagcaaaa atattaagaa gggattcaga atcagaatta
    13261 gtgttcacat ggcggcgggc ttcgttgtat aagcgagctt taagttccgc attattagtt
    13321 aaattaccgt tgtgaactaa ggtaataccg aaaggtgaat tgacataaaa tggctgggct
    13381 tcagacacac ttgagctacc tgctgttggg tagcgaacgt gaccaattcc aacattgcct
    13441 tgtaatctca ccatatgctc ttgctggaaa acatcgctga ctaagccgtt agctttgcgt
    13501 aagcggaaac gattttcatc gtctatggtg acgatacctg cggcatcttg tcctcggtgt
    13561 tgaagtaatg ttaaaccatc ataaatcgcc tgattcaccg gcgaattccc aataataccg
    13621 acaatgccgc acatatagaa aaacctcttt atttagtcgt gtttaaaaaa ctggaatttg
    13681 cttgtaactg ttcaaagaac cacttcacaa taaagtcaaa atgcggaatt aatagcgatg
    13741 atttccataa ttccgtttgg cttgcttggg taaaggtatc taagaaaaat aaaatagccg
    13801 acacaattaa aataccacgc aatgccccaa aagcaccgcc taaaatacgg tcggtgatag
    13861 acattccgct caaatcaatc actttgccta ataaaccgtt gatcacacca caaacaatta
    13921 aagtcaaaat gaacagaatc gccgctgcaa taccattgcg taaaaattct gaattttgca
    13981 aataaaccga attaatttgt gtgagataac cgcttaaata aggataaaac gagcttgcca
    14041 caaaaaaggc gattacccaa ccaagtagcg ataatgcttc attggtaaaa cctcgccata
    14101 aactgataag cactgaaaaa gcaatgattc cgataacaat taaatcaacc ataacacacc
    14161 ttaaagcgta aagctctcct attctacaaa aaaagaaaac gtttgcgtag cactatttcg
    14221 ctaaaaataa gtgctttatg caaatacaag cggttaaatt cggtaaaaaa tttacacaat
    14281 ccgaccgctt gtaaaaccta gtctgcaata taaccaacat cgtccaacgt tggattattt
    14341 gctccttgtt tagccagctc atcgcaaatc tcattttcac gatgtcctga atgccctttc
    14401 acccaactcc attcaatttg gtggcgttga atttcttggt ctaaagcaac ccataaatct
    14461 ttatttttaa ctggcttttt atcgctggtt ttccagtcat ttttcttcca gttaaaaatc
    14521 catttttgga tcccgttttt catatattgg ctgtcactat tgagttgcac cttacaaggc
    14581 tcttttagca ttgctaaagc ctcaatcacc gcccgcaatt ccattcggtt attggtggtt
    14641 tgaaaatagc ctttgctcac ggttttttcg tacccgttat aacgcagcaa aataccaatc
    14701 ccccctttgc cggggttgcc taaacaagaa ccgtctgtaa aaatttcaac taatttcatc
    14761 atcacgcttt gaaaataaaa gccccaaagc attaactttg gggcagcttt taggctaaat
    14821 tctaaaagtt atcagaatgg agatcaactg attatttttt tccaagttgt ggaatcacgc
    14881 tattattagc cgccaataaa cctgcatcgg tataaactgc taatttacca cgggtatcga
    14941 caatatctaa gttacgcatt gttaattgac cgatacgatc tgccggcgta aacggtgcat
    15001 cttctacttt ttccatactt aaacgttctg cttcgtaggt taagtttggc gattcagtgt
    15061 taagaatagt gaaatcgtta ccacggcgta actcaagcgt gaccgtaccg gtaatcgctt
    15121 ttgccaccca acgttgagcc gtttcacgca acattaaagc ttgcgggtca aaccagcggc
    15181 cttgatacaa taaacgccct aaacgtaatc cgttaatgcg atattgctca atcgtatctt
    15241 cgttgtgaat accggtaact aaacgctcgt aagcgatgtg taataatgcc attcccggtg
    15301 cttcataaat accacgagat ttcgcttcga taatacggtt ttcgatttgg tctgacattc
    15361 ccaaaccatg tctgccacca atgcggttag cctccataat taattcaacg gcatcatcaa
    15421 tacgtttacc gtttaacgcc accggcacac cttcttcaaa ggtaacagaa acagtttccg
    15481 ctttaatttc aactgattcg tcccagaatg ccacgcccat aatcggtttt acgatcttca
    15541 taccggtgct taattcttct aaatctttcg cttcgtgggt tgcacctaac atattcgagt
    15601 ctgtagagta ggctttttcc accgacattt tatagtcaaa accgttttcg attaagaatt
    15661 tagacatttc caagcgaccg cctaattcat caatgaatag ttggtctaac cacggcttat
    15721 aaatttttaa ttttggattg gttaataaac cgtaacgata gaaacgctca atatcgttac
    15781 ctttaaaggt tgaaccatcg ccccagatat tcacatcatc ttctttcatt gccgcaacca
    15841 acattgtgcc ggttaccgca cgaccaagtg gcgtggtgtt gaaatacgga ataccgccgg
    15901 ttgaaatatg gaaagcaccg cattgaattg cggcaatgcc ttcgtgagct aactgttggc
    15961 gacagtcgat taatcgtgca ttttcagccc catattccat cgcttttttc ggaattgcgt
    16021 tgtaatcatc ttcatccggc tgacctaaat ttgcggtgta cgcataaggc actgcccctt
    16081 ttttacgcat ccataacagt gctgctgagg tatctaaacc gcctgaaaag gcgataccca
    16141 ctttctgccc taaaggtaaa gcttctaaaa ttgttgctga catacgaatt cctataaatt
    16201 ttgaaagtaa aaatattcaa acgcaaacgc ttacgttcaa gcaaaatatt ctagctgaaa
    16261 agtagtaaaa attcatctaa aatttagccc gatgatttgc aaattttttg tgaaatttga
    16321 ccgcttataa tttactgaaa acctaaaagc aatagagaaa atcagaatga aaaaactact
    16381 cgtaatccgt aatgataaaa ttggggactt tatggtctgc tttccggcat ttgctatgtt
    16441 gaagcaatca atgccgaatg tggaaattac cgctcttgtg ccaagttata ctgctccact
    16501 tgccgagctt tgcccttcta ttgataagat tattattgat acggcgaata aaaaagataa
    16561 aaatgaattt aaccgtattt tacaagcggt taaaaatgag caatttgatg cggttatttg
    16621 ttttgtttca gactggcata atgccaaact cacctggcaa agtgggatta aataccgcct
    16681 cgctccagca actaaattat tccaattttt atataaccac cgtttaaccc aacgccgttc
    16741 tcaatcagca aaagcggaat ccgaatataa tttggattta gcccgtgctt ttttaagcaa
    16801 acacaatata ccgattgttg aacctcacac gccatactta agtgttgaac agcaaaccgt
    16861 ccaggcacaa aaagcaaaat tatgcgaaca actcaatatt accaccgtta aaaagtgggt
    16921 atttgtgcat agttcaaccg gtggttcggc aaataattta tctatagaac agtatgcaga
    16981 gttaattcaa ggtattttgg cagaatttga ttgctatgtg gtactcaccg cagggaaagg
    17041 cgaaagcgaa aaagctcagc agttagctca acaaatcaat cacaacaacg tggtggttta
    17101 tgataaaaat gaggggttac aagattttac acattcgctt gcgtgtgcag atttgtttat
    17161 tgccggctca accggtccgt tacatattag tggggcgtta aatattccaa ctattggctt
    17221 ctacccgagc cgactttctg ccattccacg ccgttggaaa ccgattaatg atgcgaataa
    17281 acacattgca ttttgcccac cgtctgataa agcctcacaa atgaatttaa ctttaatttc
    17341 tatttctgag gcattaaaaa cgatagtacc gtttattcgg agaatgtgga atactccctc
    17401 tctctgataa aattgctaaa cgcaatttta tctatctctc tcccactaga gggagagagt
    17461 actgaaaagc atcatttccg agtacgattc cacaaatccg catattttac gaaagtagaa
    17521 tgtgccgaaa gaactgccaa taaaaatcct tgcttgccat ctaaaaaacc ggcttttaat
    17581 agatacattt tcacaaaaca gccgatggcg tgagtcacgc catcaaataa gctggctgtt
    17641 ttgcctgcat ttgcccgttg gattgcccac gctttagcgt aacttgccga ttttaccaaa
    17701 tagtggtgaa tatctttata ggtgaaatgc agcaaatcgc cttgtagttt ctggattttt
    17761 gcctcttttg ggtaatgtac tttttcgtga accaattcat caccatattt ggcaaattcc
    17821 gtgcgataca atctcaccac acaatccgga taccaacccg agtggcgaat ttgtttgcca
    17881 aatacttcac ttaagcggct gattttgtaa acggtatttt tttcatcatt tttgaccgct
    17941 tgtaaaatag attgcttcag ttcggctgtc actcgctcat ctgcatcaag ccaaagtaca
    18001 taatcactgg tcacatattg ttgagctaac tgacgctgtt taccaaagcc ttgccaatcg
    18061 gtgttagtgt agaaccttgc gttgtattca gcagcaattt gtggtgtttc atcagtactg
    18121 ccactatcta aaatcacaat ttcatctacc caatctttta ctgtgtcaag gcaagcccgt
    18181 aaatcttgag cttcattttt gacaatcatc gcaacactta atgtcggcat agtttatcct
    18241 tctctctttt tgtcgtgtgt ttttctgcta ttcgttgcat tttactttaa aaatagtggt
    18301 ttttgtgcta ttttctacgc caaattttat caacaaaaca aattaacgga aaaagaatgt
    18361 caattacatt aacaaccaaa caaaaacaat tcctaaaagg cttggctcat catttaagcc
    18421 cagtggtgat gctggggggt aacggcttaa cagaaggcgt gttagctgaa atcgataacg
    18481 ccttagacca ccacgaactg attaaagtta aagttgccgg ggctgatcgt gaaaccaaac
    18541 aattaattat tgatgccatt ctgcgtgaaa ctaaagcggc tgaagtacaa accattgggc
    18601 acattttagt gctttaccgc caaagcgaag agaaaaaaat cagcttgcca aaagcaacta
    18661 aagcgatcta attgcaaaaa tatgtttaaa ttcaaccgct tgtattcaag cggtttttta
    18721 taggactttc tatgtttaaa aaattctctc tttataccct tgcaatgttg ctcattcctg
    18781 tggtgacttg gctggcaaat tggcactggt ctctggcaat tcaatacgct gaatttgatt
    18841 tcgactactt tttatattta atcaccgaaa ccggctccgt accttatgcc atcatcacct
    18901 gtgtggtttt cgccttatta ctggcgaggg tggttcgcaa acgctactct ttaatttttg
    18961 tgattaccgt gtgtgtcgct tcaatggtag ccactcaagc aatcaaaaca gcgatgaaat
    19021 caacctttca agagcctcgt ccatttgtca ctgctctttt ccaagataaa acagacgatt
    19081 tttatcaatt aacacgcgag caacgtgggc ttgccgtaat ggaaaaaatc ggtgcaaatc
    19141 aaaattttgt taccgctcac caagccaaag aagtgggcta ttctttccca tcaggccaca
    19201 ctatttttgc ggtttcttgg ctattattgg tggtaggttt ctgccgtaat atgcgaggac
    19261 aagcggtcgt tttggctcat ttttttgcaa tcagttgggc ggcgttaatg ctgattagcc
    19321 gcttgcgttt aggtatgcac tacccgattg atttattcac cagtagttta attgcgtttc
    19381 taatcaattt agccttattt gtgtggtttg tgccttggtt ggaaagtaaa aaatggtttg
    19441 ctaaaaagcc ttaattggca atttagccaa atcaatatac aatacaaatt attgaataag
    19501 tacctaaaat aaggagctta gaatggaaat gtcgatagaa aaaatagctg aactattaag
    19561 cgataaagaa aaagatgact atccgtttag tattgaggaa agacaatttg ccgcccaggc
    19621 tagtgctgat acttgggagg caatcttaaa taacactatt caaccttttg acttcaaaaa
    19681 ataggcttgc tatgtatcaa gtttttattg cagaaccaaa agacccaaac ttagagaaag
    19741 gcttattgaa acacttcatt aagtcttatc ttactcaaga agaactcgat ttcctgcata
    19801 aaattctcac taatttaccc aacatcagac ctttttgggg cgataccggt tacaaatata
    19861 tcgtcattga taatgtttac ttcttgtatg aagtttccga aagtgaaacg aaagtcattc
    19921 tacttggcac caaatttaat aataaacgga aaacttttaa ttttgcgaat acgaaaaccc
    19981 agcaaaaatc aatgaagaaa tggattaatg atttagcaat ttataaaccg cataaaatca
    20041 atcaatcgca ataagagagc gtaattatgg caatttatta tggcttagat gtgggcggca
    20101 caaaaattga attagccgct tttaatgaaa aactagaaaa actacacagc gaacgtgtgc
    20161 cgacaccgca gacaaattat caagattggc tgacggcaat taaaacgctg gttgagactg
    20221 ccgatacaaa atttgacgaa aaaggcactg tcgggctggg cattccgggc tttgtaaacc
    20281 gtgaaaccgg cattgcggaa attaccaata ttcgagtggc tgacggcaaa acgattctga
    20341 aagatttagc cgaatgttta gggcgtgaag tgcgtgccga aaacgatgct aactgctttg
    20401 ccctgtctga agcgtgggac gaaagtaata agccttattc caccgtatta gggttgatta
    20461 tcggcaccgg ttttggcggt ggttttgtgt ttgacggtaa aattcattca ggcagaatcg
    20521 gaatggcagg cgaagttggg catatgcaac ttaactacca cgcacttaaa ttgctcgact
    20581 gggataaagc cccaatttat gaatgtggtt gtggcaacca agcctgttta gacacctata
    20641 tttcagggcg gggttttgag ttactgttta ataatttagt aggagaaaaa atctcggcga
    20701 aagcgattat cgaacgcttc taccaacaag aaaccaaagt ggtggcattt gtcgaaaaat
    20761 atattgagct aatggcaatc agtatcagca atctgattac gattttagat ccggatatga
    20821 ttgtattcgg tggcggttta tccaactttg attatatcta ccaagctcta ccaaaagcat
    20881 taccaaaaca cttaatgcgt tcagcgaaag tgccggtcat caaaaaagca attcacggcg
    20941 actcaggtgg cactcgtggt gcagcagcat tattcttaaa gtaatgaaca aatttgagag
    21001 agggcaagcg gtcattttta ataaaaatat tgcagccctc tcttttaatt tgccttactg
    21061 cttagtttct tccggtaatt tatataactg atttttatat aaataactgc caagcaatgc
    21121 gtgtgctaac gcctcttttt taaacgattc cggctgttct ttaggggtga gtttatagtt
    21181 agctttatcg tagctaaatc cttctatcgg taaatttggt cgcattacca ccacatcatt
    21241 tccccgcatc atcgcctgtg tcgcatcata ttgcataaag gcacggtttg ggtcaatgtc
    21301 ttgcgttaaa tcatacccta tcatcggata ttgaccactt attcccgcca cagaaagtaa
    21361 tgttgtcggc atatcgagct gactcactaa acggttatcc gttcttggct gaatgtgttc
    21421 gcctaataaa agtgccggaa tatggaagtg ttgaattggc actaaatgct cgccaacggc
    21481 tcttgaatcg tgatctgcaa tcactaaaaa caccgtatct tgccagtact ctgatttttt
    21541 cgctaactca aagaaatgcc cgatagcata atcggcatat tttgccgcat tatggcgagt
    21601 ctgcttcggt tgttcataga gttcaatttt gccgtccgga aattcaaacg gatcgtggtt
    21661 actggaactg aataccaaac taaaaaacgg tttacctgat ttgtgcagtt gattaaaagt
    21721 ttcatttgcc ttatcaaaca gatcttcatc actcacgccc caagttgcgg taaatttagg
    21781 gtttttataa tctttttcat cgataatttg ctggaaacca ttaccgtaga aaaagctcgc
    21841 catattatca aaatgcttct ccccaccata aataaaggaa gtatggtatc cttgacgttt
    21901 taataattcg gcaatactaa aaaagttagt ttggcttttc gtcagtttta ccacagatct
    21961 tgccggtgtt ggtgtaaaac cagccgttac cgcttcaatt cctctcaccg aacgagtacc
    22021 tgttgcataa agattggtaa aataccagcc ttgttctgaa agtttatcta aatttggagt
    22081 gagatttttc cctcctagcg aaccgacaaa ttgagcccct aaactttctt ctaagataat
    22141 cacaatgttt ttaggctttc cttgataagt cgctttattt tgcgtgaggg tgggaatttc
    22201 atctgaaata taatctgaag ctggtcgatt acgaacctgc ttaacaatgt tgaacatttc
    22261 ctccacagac atttttccat actgttcgga agatttatct tcatctttca attgctgaac
    22321 cgcataaagc acggaataac ctgaatttag caccagtgaa ttgacaagcg gatcgcttga
    22381 aaatgccacc attgccggat taatccctcg atgggcaaaa ctggaacgcc caccaacaaa
    22441 aactattgca gcaaccaata aagccagtag cggacgcatt ttccagctcg ggaaatgcaa
    22501 atttttggtt gcccaacccg ataatttcca ataaatgatg agagaaatca tcgcaatgcc
    22561 aatcccacaa ataacagccc ataaatgtcc gttaatcagc attgtgaaca cttctctcgg
    22621 atggaccaaa tactcaatga aaagacgatt tgggcgaagg tcaaaggttt caataaaatt
    22681 cggtgtggcg acttccataa aaagaataaa tacactaccg acagttagcc aaattcttaa
    22741 aacagtctgc caaatcgaac ccagtacatt tttatgaaaa cacaacacgc taaataatgc
    22801 cggtaagcca aatagccaac atagcgaaga tatatcaatg cgaatacctt gtagtattaa
    22861 tggtatccat ccatcaacag cggatactcg atcagattgc caaacgccta acactaaacg
    22921 ggataaggtg aggataacta aattaatccc aacaaatagt aggattggaa atagcacagt
    22981 tcttgattga ctgcgttggt acattttgaa tctcctttta aaaaaatatc ggcatattat
    23041 aattgaataa tgacaggatc gcctactttt atcacaccac tgttttgtgg cacaaggtga
    23101 ataccgaaca ccggcttacc tttttcatcg caatgctttt cttttaaggt tctaaacggc
    23161 tccgatttgg ggtctaactc aagcgtgttt aaatcccgtg taatcaaaat gcaacgagta
    23221 cataatgccg ctttggtaaa tagcacttcg ccaatttgaa cttgttgcca ctgctcttct
    23281 tcaaatgcca cattgccatc aatcacaata ttcgggcgaa aacgagccat ttcgagtgga
    23341 atcggcgacc attgttgcac ttgctcaagc gattttagag acatcaaact caccgggttg
    23401 ctatctgcaa aactcattgg gtgatcggca aaattcgcaa caattcgttg gctttgcgag
    23461 ccaagccaac gtagttgcac agccctacca aaaatttcac tcagccattg attgaccgct
    23521 tctgccgcca ctttggcatt aaaatgtgtt ccccacactt cactactctg ctcttccaca
    23581 aaatcttggt aaagtgcaac gcatttttga ccgcttgtat gggtaatcat tacccctgtc
    23641 gcaatcggga aagccgctag acggtataat tccggatctt tacgggcagt aataaatttg
    23701 ccgttaggct cggctagcat aaattcacgg tcaaaattta agcctttcgg ttcaacaaat
    23761 gcctgtgaaa cttgaatagc ttgagttgat tttatcgggt aaatattgag ctcggtaact
    23821 tgcatagaaa atcctccatt tggaaatagg ataacaatac ctgcaagcgg tcgaaaagta
    23881 aaaggaattt gcaaatccct tgtgagaacg gtaaacttga gcaactttta cagcaatagg
    23941 tcagcaacaa tggcaaagaa acccactcaa gattttgaaa gcacacttaa agaattagaa
    24001 gcaatcgtta cccatttgga atccggtgat ttaccgcttg aagaagccct caacgaattt
    24061 gaaactgcaa tcaaattagt gcaacaaggg caagaacggt tacaaaaagc cgagcaacgt
    24121 attcaaatct tattaaataa aaacgatact gccccactta gcgattacga aagagaataa
    24181 tcacaatgag ctatctatta gcaaccgatc tgactcacct gcaacaacgg attaaccatt
    24241 ttctcgctga aaaattaaaa acaacggata gcgttggttc gcctttagta gaagcaatgg
    24301 cttatgcggt attgctaggc ggtaaacggg tgcgaccgtt tttaatctat gccaccggca
    24361 gaatgcttgg tgtgccgttg gaaaaattag atcatagtgc ggcggcaatg gaggctattc
    24421 acgcttactc gctggttcac gatgatttac cggcaatgga cgatgataga ttacgccgtg
    24481 gcaagccaac ctgccatatt gcctttgatg aagctaccgc tattttagcc ggtgatgcgt
    24541 tacaaagttt tgcgtttgaa ctgctggcaa ccgatccgca tttgaccgac cgagaaaaag
    24601 ttgttcaagt tacagaattg gcaaccgctt ccggtgcaaa aggaatgtgc ttagggcaaa
    24661 gtttggattt gattgcggaa aataaagcgg tgagcttgga agagcttgaa ttaattcatc
    24721 gcaacaaaac cggggcattg attctatcat ccgtgatgat gggattaaac ctttccgaat
    24781 attcgcaaaa tgtagccata aaacaaccgc ttgtaaacta tgccaaagcg attggcttag
    24841 cctttcaggt gcaagatgat attttagatg tcattggcga aacagataaa atcggcaaaa
    24901 tagtgggttc agatgaacac ttaaataaaa gcacataccc gaaattgttg ggcttagacg
    24961 gggcaaaaca aaaagccgaa atgctttatc aaaccgctct ccattcgctg gaacagttgc
    25021 ctttcgatac caccgcatta aaagagttag ctaattttat tgttaagcgt gaaaactaag
    25081 aaaaaaccta gccgaagcta ggttttttag tgattaaacg tgaggctgag cttccggcaa
    25141 tgtgccttca atttcatata ccacatcgcc gtctttaaag aaaacatagc caccgttttt
    25201 cattttggtc cagttttcat ttttggtaag tggctgagtg gcaataatcg tcactttatc
    25261 ggtaattttg gtatattgac taaaatcaat cgacacatca tcatcacgca aggctttgcc
    25321 aaacggtgct ttacggcaaa cgtaatgcag attagttgta caacgggcaa tcatccaatg
    25381 accgttggat aaaacaaaat taaatacccc gtgttccgca attcttgagg tgatttgcac
    25441 cacggcatca aaaatctctt tttcgcttgg tttagccgga tacatctctt ttaattccga
    25501 cacaatacgg caaaatgccg cttcggaatc ggttgtacca atcggctggt agtggcactc
    25561 ctcgcatacc ccaacacctt ccactgtgcc gttatgggca aacacccagt tctcgcccca
    25621 taattcacga atgaaggggt gggtattttc caaattcaca tcaccacgcg tagctttacg
    25681 aatatgtgca ataacattga gcgatttaat ttgatattgg ctgattgctt ctgccatcgg
    25741 cgatgatgct cccgggcggt tatcacgaaa aacccgaacc cctttgcctt caaaaaaggc
    25801 aattccaaac ccatcagtat ggtgatccgt cagcccaccc cgacggcgaa atccatcaaa
    25861 agaaaaagta atatcggttg gcgtattaca attcattcca agtaattgac acataatttg
    25921 cttcttaaaa ccaaataatt tacaacaaaa aataattgtt acatttaaac agattgatta
    25981 gaaaattcaa tgctctttac ataaaaatct tatgctttat tttcatacat tatgctgttt
    26041 aatggtattc ttttttgaat agcgataata gaaaaatcaa gccggcacaa atgactaccg
    26101 aaggccctgc tggtgtatct ttccaactgg ataacaataa accgccactg actgcaataa
    26161 tactgaagaa aatcgcaatc aacaccattt tttcaggcgt tttagcaaag cgtcttgccg
    26221 tagcagacgg aataatcagc agtgaggtaa taattaaagc accgacaaat ttcatactta
    26281 atgcgatagt taatgcggtt aaaatcatca gcaataaacg taagcgagcc acatttaatc
    26341 cttcaatttg agcaagttcc gggctgatgg taatcgacaa caaccgcttc caaaacagca
    26401 ttaaaatcaa acaaattagg gttgctccga ttccgataaa caccacatca gaaaaattaa
    26461 ttgccagtaa atcgccgaat aagtaagaca tcaaatccac tcgtacatta tccaacaaac
    26521 taatggtaat taccccgaga gaaaggctag tatgggcgat aatccccaac acggtatcca
    26581 ccgaataatt ggttttttgc tccaaccaaa ccagcaataa tgcaagaaga atagtcattc
    26641 caattacagc aagatacgga tcgagttcta aaaaaatccc taatgccacg ccgagcaatg
    26701 cagagtgcga aagtgtgtcg ccgaaatacg ccatttttcg ccacaccaca aaagccccta
    26761 gaggtgcggt aataaaggct aacaaaacac cggcaagcca agccggaaat aaaatatcaa
    26821 acatattggt tctcaaaggc aagtaaaaca agcggttatt ttttcggaaa aatttgcaaa
    26881 ttttttgctg atttagaccg cttgtcatat ttatttataa cgttgaatcg ggctggcttg
    26941 atcctgtgct ttcagccacg ccattttttc tttaatctgt ttttccattc cccgctcact
    27001 tgggaagtag aattcggtat ctttcagctc aggcgggaaa taattctccc cggcggcata
    27061 agcgtttggc tcattgtggg catagcgata ctcttcgcca tagcctaaag atttcattaa
    27121 ttgagtggga gcattacgca aatgcgccgg cacatcgtag tcttttgcct ctttagcgag
    27181 gcgctttgct tcattaaaag cttgatagac cgcattgctc tttggggcaa ctgccaaata
    27241 aatgatcgct tgggcaatcg ctctttcacc ttcataagcc cccactcggg taaagcaatc
    27301 ccaagccaca atcgcaattt gcattgctcg agggtcggca ttaccaatat cttcagaagc
    27361 aatcgcaagc agccttcttg ccacataaag cggatcacca ccggcggtta aaattcgggc
    27421 ataccagtat aatgctccat cagccgatga gcctcgaatg gatttatgta acgcagaaat
    27481 gagatcatag taacgatcac cgcctttatc aaaacgagct tgtcgttcgc ctaacacttc
    27541 ggtcagcaaa cttttattca gcactttccc tttagctgaa tcttgtgcca tatctaccat
    27601 taattccaaa cagttcaagg caaaacgggc atcaccatta acataatcag caagcaatgc
    27661 cagtacatca tcttcaagta ccaaagtttc attgcctaaa ccacgttcgg tatcggctat
    27721 cgccatttgc aaaattttta gaatttcgac cgcttgtaac ggctttaaaa tataaattct
    27781 ggctcgggaa agcagtgcgt tatttagctc aaaagaggga ttttcggtag tcgcaccaat
    27841 aaaaataata gtgccgtcct caatatgcgg taaaaacgca tcttgctggc ttttgttaaa
    27901 gcggtgaact tcatccacaa aaagcaacgt tcgtctgccg gcttggcggt ttaatttggc
    27961 ttgttcaatc acctctcgga tctcttttac accgctggtc acagcggaaa tacgttcaac
    28021 ttccgcatca agatgatggg cgataatttc agctagggtc gtttttccgg tgccgggcgg
    28081 tccccaaaaa atcatagaat gactatgtcc ggcttcaatc gctctgcgta acggtttgcc
    28141 ttcgccaatt aaatgagatt gcccgacata ttcagccaag tttcgaggtc gcattttggc
    28201 tgcaagcggt cgaaaatctt cactaaaatc aaaagacaaa ctactcattt taacctctta
    28261 acgtaaccgc agttggcgac gaatatgacg cattaataag aaaatccaag accaaagcac
    28321 accactgatt acagcaccta acaattcctg tgaattaaat tcggcactgt gtaaaatgta
    28381 ttcaatcacg aaaataaaga aacggatcag cacaatatat gccattacta ataggctttg
    28441 tagccatagc gataagtttc gcagaatcag atggtatttc gcaacaaaat aaatcgccac
    28501 cgataacact aaggcgtgga tgcctaaaat cgagccaaga atcagatccc agacgatgcc
    28561 ggcaataaaa gccgtcccca cactcatttt atcaggtaat gccaatgccc aataaattaa
    28621 caccaaaacg acccaagtag ggcgtagccc ttggaatcct accggccaag gcataatctc
    28681 aagtacaaaa gcaaccacaa aaatcgcaat tatcacaagg atctgaaaaa tcgggtttgt
    28741 tctcattatt ccgctccttc ttccgtatga tagttttgtt cattttccgc ttctggttgt
    28801 gctgccggat tctcatttat ctcatcattc tctatttgtt cttcttttgc ctctagctgc
    28861 acttcagttt tcttgttaga catctgtttt aaacgttcaa atggattcac gctattacgt
    28921 ctttcttcaa caacttcacg tacttgcgct ggcgacaagc tttgggagta gtttttctct
    28981 tccgccgtcg gccaaagcag taataagtaa cgtaagcgat caaatgaggc taacggacga
    29041 gcaacaattc tggcaaattg acttttggta tcattttcaa ccgtttctac aatcgccacc
    29101 ggatatccct cagggaaacg tccacctaag cctgaagtca ccagcacatc accttttacc
    29161 acatcaatag aacgaggcaa gttatcaatg accaattcat tattcacccc tgtaccactg
    29221 gcaatgccac gtacatcatt gcgtagcact tgaacaggaa tagcatgagt aatatcagag
    29281 agcaataaaa cacggctaga tttttcccct acagaaataa cttgtccaac aacacctctt
    29341 tcatcaataa taggttgccc gacaaaagca ccgtctaaac gcccttgatt aatcactact
    29401 tgctgacgat aagcatccat ctcagcagct aatacttcag caattttttt atactcatct
    29461 tgccgaagcg gagaactcaa taacaatctt aaacgctgat tttcaacctt tagctgatca
    29521 agcaataata aatcggcact tttttctctt agctgctctt ttaataaatt attctcaagc
    29581 tgtaatttat tattatcaat aaaattgcca cttaccccat ctaaaattga acggggggta
    29641 ttagcaaaat aatataatcc acttaccgcg gtttctaata gattacgcgc ttgaatcatt
    29701 aaagagctac gcccatcgga aataatcagc ataatagaaa atatcactgc gataatcagg
    29761 cgcatcccta aagagggagc tttagcaaaa ataggtttca ttagagaaat atatgtgaat
    29821 ttattgggaa tctataacga aaattgacaa tagaatcaat ccattgccaa cctccattta
    29881 aacagctgct aagagaaatg tattaatcat caatactaaa tacatcacca ccgtgcatat
    29941 cgatcatttc taatgcttta ccaccaccac gagctacaca agttaatgga tcttctgcta
    30001 ctacgacttg cacgccagtt gaatcagaaa gtaaacgatc taaattatgt aataatgcac
    30061 cacctcctgt taacaccata ccgcgctcaa aaatgtctgc tgccaattca ggtgggcatt
    30121 gctctaagac tgatttaact gcctctacaa taccatttaa tggttgttca attgcttcta
    30181 atacatgtct tgagttaagc tcgaaagtac gaggagcgcc ttcagctaaa ttgtgtccgt
    30241 gtacttccat tgttttaaca tcatcatcgg attcaatctt agcactagca atttcttgtt
    30301 taattcgctc tgccgttgct tcaccaatag cagaaccaaa atgacgacgt acataagcaa
    30361 taatagcttc atctaactta tcaccaccaa tacgcacaga agttgaatac acaatgccgt
    30421 ttaaagaaag cactgccact tcggttgtac cgccaccaat gtcaattacc attgacccca
    30481 ttgcttcgtg aaccggcaaa cctgcaccga ttgcagccgc cattggctct tcaattaaat
    30541 agacttcacg cgctcctgct ccaattgcag attctttaat tgcacggcgt tccacttgtg
    30601 ttgcacctgc tggcacgcac actaatacac gagggcttgg gcgcataaag ttattactat
    30661 gtacttgttt aataaagtgt tgcaacattt tttctgttac aaaaaaatcc gcaatgacac
    30721 catctttcat tggacgaatc gccattatgc tttttggtgt acggcctagc attaattttg
    30781 catgtgagcc taccgccgca atacttttta gcgatcccat acgatcttga cgtacagcaa
    30841 ccactgaggg ttcatctagc acaatacctt gacctttaac ataaaccagt gtatttgctg
    30901 tcccgagatc gatagaaaga tcgtttgaaa ataatcctaa aaatttttta aacataaaag
    30961 aatccgttaa aataaaatta ttcaaaaata agcacatttt atagtgcgaa cattgctact
    31021 aatatagcaa aaaagcccgt cattcatcaa tgaaaaaatt taaactccac tagaaaattt
    31081 gcagagcaag ttgataagta taaatcagta aactaaaagc gataaagtac ataattagcc
    31141 cggtaacagc atctaaaatt tgccaagttc ttcgctttgc aaaataaggg gaaagtaagc
    31201 ttgctccata acctatgcca aaaaaccaaa taaatgagca aagtaatgca cctgctaaaa
    31261 agtatatttt accgttaaaa tctaatttcc caccgatact gcctacaatc acaaccgtat
    31321 caatataaac gtgaggattt aagaatgtaa tcgcaaaggt aatcagtaaa gcctttttta
    31381 agctcgttgc attctctcca cttgccacaa ggtattcacc acttttaaat acgctgataa
    31441 atgaacggct accgtagctt aatagaaaaa tggcccctaa aagcgaaata atgaaactta
    31501 caacaggcaa ttccgcaatt aacgtgccta agcctagcac acctatcgtc attaaaaata
    31561 catcacctaa aaaacagagc aatgcaatcc aaaatatgtg ttgttttaaa atcccttgct
    31621 ttaataaaaa ggcattttgt gcgccaatag agacaattaa gccaaaacac actataaatc
    31681 cttgaatgaa aatatccatt ttttctccaa aatcgcataa caagcggtca attatacaaa
    31741 aaattttgca aaacttcggt ataatttatc gaatactctt ttgactgaat aggaaatttt
    31801 ttatgactga tactagccag acttcatctt gcgttgtcat tgcgattgcc ggcgcatctg
    31861 cctcaggtaa gagcctgatt gcctcaacca tctataaaga actcaaaaat gaattgggaa
    31921 cagataatat cggtattatt tccgaagatg cttattatag agatcaatct catctaacaa
    31981 tggaagaacg gattaaaacc aattacgatc accctaattc aatggatcat catttattgg
    32041 ttgaacattt acgccaatta aaacaaggta atgcgattga aattccagaa tatgactata
    32101 ccgaacataa tcgtaaaacg accacgaagc actttgaacc aaagaaaatc attattttag
    32161 aaggtatttt attgctgaca gatgagaata ttcgcaatga aattaatgtt tctattttcg
    32221 tagatgctcc tctggacatc tgctttatcc gccgcttaca acgtgatatg gtggaacgtg
    32281 gacgttcgat ggaatcagtg attagtcaat atcgcaaaac cgttcgccca atgttcttac
    32341 aatttatcga accctctaaa caatatgctg atattattgt gccaaaaggt ggcaaaaacc
    32401 gtattgccat tgatattctt aaagcacaaa ttaagcaatt actaaaataa aataggagct
    32461 aaatatgcgt ttatgtgata cagatattaa acgttactta gatgaaggta ttattgccat
    32521 aacgcctcga ccttcagacg ataaaatttc tggcgccact gcagatgtgc gtttaggtaa
    32581 ttcgtttcgt gtatttcgtg aacataaaac gccctatatt gatttaagtg gccctagaga
    32641 agaagttgcc gctcagttaa ataaagtgat gagtgatgaa attatcatcg gtgatgatga
    32701 agcatttttc cttcatcccg gtgaccttgc actcgcaaca acccttgaat cggtttcctt
    32761 accagccaat atcgttggat ggttagatgg tcgttcgtca cttgctagat taggcttaat
    32821 ggtacacgtt accgcccaca gaatcgatcc gggttgggaa ggcaaaattg tattggaatt
    32881 ttttaatgct ggaaaattac ccctagcttt acgccctaat atggcaattg gcgcattaag
    32941 ctttgagatt ttaagtggtg atgctgcaaa accctataat gcgcgaaaag atgcaaaata
    33001 taagaaccag caaagtgcca tttcaagtcg gattaatcaa gattaatata gtacatgcct
    33061 tgcaatcata cattaactat gttagttttt taatcagttt attacacagt aaggagtata
    33121 actatgttac attatgcagt cgtatttttt gtcatcgcta taatcgcagc gctattagga
    33181 tttggtggta ttgctggaag tgctactgaa attgccaaaa ttctcttttt tgtcttttta
    33241 atacttactg ttatttcgtt cttcttcaag aaaaagtgac acagttaaac ctaatttttt
    33301 aagttaaaat atagttcaaa aaaacagttg gtaatggata tttataatta ttcttaccaa
    33361 ctgttttgct attatatctt tttaagatga aatgctcgtc ttttgtttca ctttttatac
    33421 tgctttttat ttttatacca tttccagcct aaaaatagaa taacaatgcc taaaatggca
    33481 aaaatgaggt gctgcccatt agctacttgt tcttttagcc aatccaaatt agatgcccca
    33541 tagtcgccta aataaaccca aattggcaca gagataatag cggcacagaa atcaactaat
    33601 aaaaatttta cgaagctgac ttttctggta atacctgaaa ctaagtaaac caccgcgcgc
    33661 aagccaggta aaaaacgagc cataaaaagt agtttccatc cttgtttttc aaaacgttct
    33721 tgcacggttg caaaacgttc aggtgtcgca acattcctga ttaatggaaa tttgagaatt
    33781 ttttcgccat agattctacc tagccagtac attgtgctat cgccaactaa tactcctaac
    33841 atactaacaa ccagcatcca atgcacattg gtgtagccta atcctgaaat aacaccaccg
    33901 gatactaacg taatatcttc aggaatcggc acaccgaaac cacaggcaag tagcacaaga
    33961 aaaacagccc aataaccata gctactaaaa aattcaatca atgtttccat attactcctt
    34021 aatgtttaaa ttccgaaccg atttacgttt gaccaattca ggaaagaact ctaatacttt
    34081 aggctctttt gcgttttcgt tatcttcaat acgttctaat aataattcta atgctgccga
    34141 gcctaagcga gattttgact gatggattgt cgtaagaggc ggtgcataaa agcgtgagct
    34201 atgcacgtta tcatacccga tcactgaaat atcttgcggc acattcagcc ctttttcggt
    34261 aatagctgaa attgccccta gtgccattga gtcattaaaa caaaaaaccg cggttggtaa
    34321 tttttcactg ctcttaagca aattattcat acactcatac cccccctcag gttcaaaatc
    34381 gccttcttga atccattctt cacgaataga caaacccgcc tcagatagcg cttttttaaa
    34441 accttcaaaa cgggttcttg caatttcttt atctctattg ccggtaatta cagcaatatc
    34501 ttgatgcccg ttttcaatta aatgctgagt cgcaatatag ccaccttcaa caccgtgatc
    34561 taaaataata tcactgcgtt catcacttcg tccccaatcc ataatcacca ttgggatatt
    34621 gctgttttca aagatatcaa atgaattagc tgtatattcg gagcacatca ccaaaatgcc
    34681 atcaacccgt tttttgatga gcatatctaa atgattttga attttctcaa gtttgttttg
    34741 agtattgcac aaaaatagtg aatacccttt gctatagcaa aattcctcta ccgctaacac
    34801 aatttcagcg aaaaacggtg attcgctggt tgtaatgatc ataccgatag atttagtcgt
    34861 attaattttc aaactccgcg ctacagcact aggagaatag ttcagcgctt taatagcctc
    34921 ccaaactgct tttgtagtgt cctctgctac aaagcgggtt ttgtttataa cgtgagaaac
    34981 cgttgtagtc gatacaccag catattttgc gacatctttt atcgttgcca tacctttttc
    35041 ctcctaaata agtagtggtg cattataact gattctaact gacttttatt ataaagaaat
    35101 agatagaatg caagcggttg ctttttatca agaatttgca aaaaatttta caaatatcac
    35161 cgcttgttag gctttaattg caatcattga gccaaaatta aagcattgaa accaaagttc
    35221 aacttgtgta aaaccagctt cttgcagacg ttttttatgg gtttcaatac tatctgttcg
    35281 catcacattt tccaaagcat tacgcttttg gctgacttcc aattcactgt agccatttgc
    35341 tcgtttgaat gtgtgatgaa ggtcgatcaa tagctcgttc atttcctcac tctcaaaggt
    35401 aaatttttcc gataacacta aaatgccatt ggaatttaat ccttgataaa tcttctgtaa
    35461 taatgctagg cgatcttctc ttggtaaaaa ttgcaaggtg aaattaagta ccaccattga
    35521 agcattttta atttcaatgt ggcgaatatc atcaagtaaa atcgtcaccg ggatctcaga
    35581 gtgataagca cttaaatggg ttttacaacg ctcaaccatc ggctgagaat tatctacccc
    35641 gataatctgc acattcttcg cattcacatt acggcgaata gataaaatcc ctgcgcctcg
    35701 tgaacaacct aaatcataaa catttgaatt atctgtgaca aaacgctccg ccaacattcc
    35761 aatagcagta ataatattgg aatagcccgg cacggagcgt tggatcatat ccggaaacac
    35821 ttcagcaacc gattcatcaa aagtaaaatc gcccaatttc tcaatcggag cggaaaataa
    35881 tgtatctctt tgcatttttc tcccttattt ttctaaaaat ttattgattg ctctcacaac
    35941 agttcctgtt ttttctgcgt gaacccaatg atcagcgttt gccacaatga aagatttggc
    36001 ctgcggaaat tgtgccaaaa tcgtttgtgt atgctctgct tgaatataat ccgataatgc
    36061 acctttaata aacaaggtcg gtttatccac aaatacctgc tgccacccca tcacattctg
    36121 ataattatct tttagcgcct gtaaattaaa acggaaagat tgctcgcttt gggcatcaaa
    36181 agatttcaac ataaactgtt gcacgccttc atctcgaata tattcagcca ttatcgcttt
    36241 agcttgctga cgattctggg gtttagcttc tttcaccgca aataaggctg ccataacctg
    36301 ctgatgccga ttttgggtat aagtgaccgg ggcaatatca atcactacca atttctccac
    36361 cagttcagga gcaaatgcag ccaatgccat cgcacttttt ccgcccattg aatgcccaac
    36421 cacaatagca ttttggatat ttaattctgt gagtaattgt gctaaatctt gtgcaatcaa
    36481 agcataattc atttcgtctg aatgaaaaga tcgcccgtga tttctgagat caaccattaa
    36541 aatggagtaa cgttctgcga atggttttgc tattgcgcct aggttattta aatctccaaa
    36601 caatccatgt aagaagatca tcgtctgagc attagcatga ttattcgaag gttggtaatt
    36661 aaagtttaac tgcgattttt ctgtcatata aatgtcattg ttcatataaa ttttcagcga
    36721 tgttcctcta taaaaaacaa tagaaatgcg tataatagca agcactatta acgcatttaa
    36781 tacccgcaga tatttgagga tcccgatgaa acgaatcgaa attgatgatg aattatatca
    36841 gtatattgca agccgtacac aatctattgg tgaaactgcg tcagatatat tacgccgtct
    36901 attacgcctg ccacaatcgc ctcagccttt tgttttagta caagaacaca tgatcaacga
    36961 gcttaaagag cttgtcaaaa cgccttctcg tgctacgaaa aaaaatgaat ccaatgcaga
    37021 aaaaaccgtt gaaaaattgg aaaacatttt aaattccgag cattttatga acgaaaataa
    37081 aaatgtagtg cgttttacta tgctattagc cgcattatat cgagcaaatc cggaggcttt
    37141 tgctaaagca accgaaaaag tgcgtggtaa tgaacgtatc tacttttcgc aaagtgaagc
    37201 cgaaatttta gctactggga gtggagtaaa agccaagcag atcccagatt caccgttttg
    37261 ggtaattacc aataataata ccgcacgcaa gggacttatt ctcaaaggcg taatggaatc
    37321 catgaaagta ccaagccagt taatcgaacg cattcaagcg ctttttatct aattaattga
    37381 aatgctcatc aattctactc gctttcctac ccaattttgg gctgctcatt cagcccaaaa
    37441 tgtggcgatt atttgggaaa aaggaacatc agactatctt aaccaccttc catcaaacat
    37501 cacttggtat agtttgaatc agttgattgc gcaagctatt ttcgtgttgc aacaacaagg
    37561 tgctactccg cacagtttga ttgcctattg tggttctcat cggctcattg gcttgctcac
    37621 ttattgtgct agccttgctt tgggggctaa gattctaatg cttaaccctg ctcaaacagc
    37681 aagtcaacga caagcagtct tagatgacaa tggtgttgag ctcattatta atgatgccga
    37741 ctttgcaaaa ttttcagcaa aaacgaccgc ttgtaatgcc ttccctacga ttgattttga
    37801 aaaaccagct accctaaccc taacctcagg ctcaagcggt aaacctaaag cagtggtgca
    37861 ttctatagcg gcccatctct atagtgccga aggagtatgt gaattaatgg catttgagca
    37921 gccaaactct tggctactga gcttgcctct gtttcacgtt tccggacaag gcattatttg
    37981 gcgttggtta tttaaaggtg caacactgta tgttcacgaa gacaaaagtg atttttttct
    38041 ttcagcacaa aaagtgagcc atctctcttt agtccccacc caattacaac gctatttaaa
    38101 ccaattagat tctatggtca gccaaaaatg tttactgggt ggatctatgc ttccagccga
    38161 attgattgct caagcacaac aatctgggat gactaccttt tcaggctacg gaatgactga
    38221 gatggcatca accatttgtg cagtagaaaa tgatttaaac agtgttggtt ttccgttaaa
    38281 acatcgggaa ctaaaattag aaaatggtga aatttgggta aaaggcaaat cactcggctt
    38341 aggctattgg caaaaaaatg ggcaaattcg accgcttgta aacacacaag gctggtttgc
    38401 cactaaagat cgtggcgaat ggaatcacaa aaaacagctt gtaataaaag gacgattgga
    38461 taatatgttt atttcaggag gggaaaatat ccaacctgag gaaattgaac aactgatttt
    38521 tcgttctcag cttgtcgaac agattatcgt gttgccgatt gaagataagc aatttggaca
    38581 tcgaccagtg gcgttcttac aattcaagca atctgattca aaaaatgaac tccataaatt
    38641 aaaaatttgg ctgtctgata aattagaaag attcaaacag cctgttgcct attatttact
    38701 ggatatagaa aaataccaaa aacaaggctt aattaaacta tcaagaacac aattacaaca
    38761 agatttaaaa ctcaaagtat taaaggaaat ctatgtttag accgatttta aaaacatttg
    38821 tgcttagttt aggcttaatg ctaaatagtt atgcattagc tgaattgcca acccaacagg
    38881 tagtgcaaac gcagttagat agcgccaaaa aattagatca agccgatgcg gataataagg
    38941 cattggttca aacacttgaa gatacgcttg ctttcttagc ccaaattgat aaacaaaaag
    39001 cagataatca ggcattgaat aaatctattc aagattccca aaaagcatta aaaacaagcc
    39061 aacataatct tgaaaaatta aaagaggtga ctattgcaag tgtcgataat ttaacacaaa
    39121 aagcgacaac agatttacaa aaagagttaa cctctacaca atctcagctg gaaacagtac
    39181 aacacgattt aagtattatt aataataatt tagttgcaca aaataccgca ccggataagg
    39241 ctcaaacggc cttaaccgag atggttaaac gtaaacagga aattagtagc caactttcag
    39301 cgactaacat taaaaatgaa ctacagacaa agttagaagt agaattagaa ttaatagaat
    39361 taaaaaacac ttacaatcaa atattacttg gtggcagcga ggatttatct gcgctttact
    39421 ctgctcaatt agatgaaaaa aagcaagagc agcaaaatct acaagcagaa attgcaaacc
    39481 tgcagactgc tatcaacaat aaaattgtag aagagtctca gaacaagcta gatcaagcac
    39541 aagcggttca aaatcagcaa aataatgcaa cgacgaaccc agttatcttg cgtgaattgg
    39601 atataaatac caaagtcaca caagagttgc taaaacagac caaagatatg acgcagttat
    39661 cacaagataa tttgcgaatc aaaagtgtgc tagataactt acagcaaacc caacgtaata
    39721 ttgaagaaca aatcagttct ctgcaaggta cgttggtgct ttctcgtatt attaataagc
    39781 aaaaacaatc attaccacaa gatgaaatga tttccggact atcaaaacaa attgcagatt
    39841 tacgtgtacg tgtttttgat atcactgaat ttaaagactc ttttgcggac ataaatgctt
    39901 atatcagccg catagagcaa gatgaaaaaa caacctttac gagtaaagag aaagaacaac
    39961 tgagtaaaat tttacaggaa cgttctgaca ctttaactga gatgattaaa tcattaaata
    40021 atcagctcaa tttattaatc aatattgaac taaaccagca acaagtgcag accattagtg
    40081 atgcgttaca gcaaaaactg caacagcaaa gcttctgggt taaaagtaac aaccccattg
    40141 atcttgaatg gtttagtaaa tttgtcgata ttacccacta tcaatttatt gatattggaa
    40201 aaaaactcaa tttttcaaat tggcgggata atttattacc tgcaagtatt ttagtcggaa
    40261 ttttattgct attagccatc tttattaatc gccaaaaaga taaaattaaa caaaaattac
    40321 accaaattaa taatcgacta aaaattgtcg ccacagatag ccaatggaac acccctcttg
    40381 ctattttttg gacattagtg ctttgcctgc caagtacact aatgttctta gccggatttg
    40441 ttgctatcac ttatatttca tttgaaaatc ctcaggaagt ctggacttgg ggattaaaaa
    40501 tggcaattta ttggctgtat tttgcctttt tagtggcgat gctacgcccg cacggcatag
    40561 gacatattca ctttaatatg ccacaaaaaa gtaatgaaat cttccgtaat attttaaaac
    40621 gttcggtatg gatcattgct ttattactga acacctctat ttttacaaac ttagagatgg
    40681 gaatatctta cgacatgctt ggacaaacaa tgactatttt tgtccttata ttaatgattt
    40741 ggatgattgt accggcattt aggcaagcta tttctaccta tgagaatgtc acaacagaag
    40801 agaaaaaaga atctaaaagt attttactca ctattgtcaa attagtgcta ctgcttgccc
    40861 ctatcattct tatcattctg attgcattgg gctattacta tactgcactg gtgatcattg
    40921 agcatttagt agattcttat tttgcgatca ttacttggat tattattcgt aatattctct
    40981 atcgagcatt ctctatttca tcacgccgtc tggcttacag acgtttacaa gaaaaaagag
    41041 aagcagctga agccaaaaca cgagctaaag cagaacaaaa tgatgaaaac ccggacggtg
    41101 tcgagcttcc ttttgagcta aaagaagact ctattgccgt aagcgaagtc aagaaccaaa
    41161 tgttgaaatt aactgatttt gtgctttgga ttggcttatt tgtgctgctt tactgggttt
    41221 ggtcggactt aattactgtt gcactctacc tagacggcgt taccttatgg caacaaagtg
    41281 ttacaacaga agccgggatt gtaatggaat ccattaccct gctgaattta ctcactgcta
    41341 ttctgattat tgtggtaatg gtggtactca ttcggaactt atccggttta cttgaagccc
    41401 tgattttctc gcacttcaag ttatcgcaag gtacaccata cacaattacc acactcttaa
    41461 cctatttgat tattgcgtta ggggcaatct ttgcgttcgg tacattaggg atgtcttgga
    41521 gcaagctcca atggctacta actgcacttt ctgtcggtct gggttttggt atgcaagaga
    41581 tctttgcaaa cttcgtttca gggattatca tcttgtttga acgtccaatg cggattggcg
    41641 acaccattac catcggcact tacagcggta cggtttccaa aattcgtatt cgtgccacaa
    41701 ccttagtcga ttttgacggc aaagaagtga ttgtaccaaa caaagcattc gtaaccgaac
    41761 gcttggtgaa ctgggcatta agcagcaccg caacccgcat tattgttcaa gtcggcgtgg
    41821 cttacgggtc tgatttagaa ttagtcaaac ggctgttatt acaagtggcg gaagaaaatc
    41881 cgaaagtctt gaaagatcca caaccaaggg cttatttcct tacctttggt gcaagcactt
    41941 tagatcacga attaagagcc tatgtgaacg atttatctga tcgtaaccca actattgatg
    42001 cactaaatac acgcatccac cagctcttta atgaacataa tattgatatt gcatttaacc
    42061 aattagatgt ttatatcaaa aacaacgata cacaagatga aattaaagta gattcaaaac
    42121 gctttgagtt tgaacgacca aataacataa cagcaaaaga aaaggaataa caatggcagg
    42181 caacagcatc ggacaattat ttaaagtgac cactttcggc gaatctcacg gtattgcatt
    42241 aggctgtatc gtagatggcg taccgccgaa tatggcttta agcgaagcag atttacagcc
    42301 ggatttagac cgccgtaaac ccggtacttc acgctacacc acgcctcgcc gtgaagatga
    42361 tgaagtgcaa attttatcgg gagtctttga aggcaaaacg acgggaacaa gcattggttt
    42421 aatcattaaa aacggtgacc aacgctcaca agactatggc gacattgccg aaaaattccg
    42481 cccggggcac gcagattata cctatcagca aaaatacggc attcgagatt accgtggcgg
    42541 tgggcgttct tctgctcggg aaaccgcaat gcgggttgcc gccggggcga ttgccaaaaa
    42601 atatttgcgt gagcaatttg gcattgaagt gcgaggctac ctctcacaaa tcggcaatat
    42661 caaaattgac ccgaaaaccg ttgaaaatat tgaacaaatt gattggcacg cagtcaatag
    42721 taatcctttc ttctgccccg atcccgttgc gattgaaggc tttgatgcct taattcgtga
    42781 gctgaaaaaa gagggcgatt cggtgggggc aaaattaacc gtgattgcag agcgtgtacc
    42841 tgtagggtta ggcgaacctg tgtttgaccg cctagatgcc gaccttgccc acgccttaat
    42901 gtcgatcaac gccgtgaaag cggtggaaat tggcgatggt tttgcagttg tggaacaacg
    42961 tggtagccag caccgagatg agatgacgcc gcaaggcttt ctctctaatc acgccggcgg
    43021 aattttaggt ggtattagct ccggtcagcc gattatcgct catattgcgt taaagccgac
    43081 ctcaagcatt actattcccg gcagaagcgt gaacaaaaac aacgaagccg ttgaagtgat
    43141 cactaaaggc agacacgacc cctgtgtagg tattcgtgct gtgccgattg cagaagcgat
    43201 gatggcgatt gtactactcg accatctgtt aagatttaag gctcaatgcc gttaaacaca
    43261 taaaattgga aaaatgaaat tattaaaaac acttttagtc tcaagccttg cttttacagc
    43321 taccgcactg aatgcaacgc aatgggagaa aatcaaaact ccggttcaag gaaaagcaca
    43381 atctatcggc ggttatagta acggctgtat tattggggca cagccccttg cattaaaagg
    43441 cgaaggctac caagtgatcc gctcggctcg taaccgctat tacggacacc cacaactgct
    43501 cgattatctc actcacttag gcaaaaaaac caaagctgcc ggtgtgccga ccattttaat
    43561 cggcgatatg ggaatgcctg ccggtgggcg ttttgcctcc ggtcacgcct cccatcaaac
    43621 cgggctggat gctgatattt ggtttaagtt cggaccgatg gacgatgaaa ccgcccgcaa
    43681 tccagcaggg cttgccacca ttatggtaaa ccgtagtacc gagcgggttg atgattcact
    43741 ctggaatcaa caccatacta atttagtaaa acttgctgca accgatcctc gagtggatcg
    43801 catttttgtc aatcctgcca ttaaagtgaa actctgccaa accgcaggca atgatcgtgc
    43861 ttggttacgc aaaattcgcc cgtggtacgg acacgactcc catttccacg tccgtttaac
    43921 ctgcccggct gatgccgcaa gttgtgaaaa tcaagccctt gtgcctgccg gtgacggctg
    43981 tggtgaagag ctttactcgt ggtttgagcc gaaagaagcc tccggcacac caaaagccaa
    44041 agtgctaccc acagcgcctg ttcaatgtca gatgatttta tctgaacaag gcttgaatta
    44101 attgcaaaat aacaaccttt tttgaccgct tgtcagccca caagcggttc attttcttaa
    44161 ataatttacg attatgcgtt tatttgttgc cgaaaaaccc agccttgccc gagcgattgc
    44221 cgatgtgtta ccaaaacccc ataccaaagg agatggcttt atccaatgcg gcgaacacga
    44281 cactgttact tggtgtatcg gtcatttatt ggaacaggct gaacccgatg tctatgatga
    44341 gcgtttcaaa atgtggcgaa tggaacattt gccgattgtg cctgaacaat ggaaattgat
    44401 tcccaaaaaa gagacgctca agcagtttaa agtggtggaa aagctgatta aaaaagccga
    44461 tgttttagtc aatgccggag acccggatcg agaagggcag ctgttggtgg acgaagtttt
    44521 tggctatttg aatttatctg ctgaacgcaa aagccaaatt cagcgttgtt tggtaagcga
    44581 tctcaacccg aatgcggtga gccgagccat tgaaaaattg caaaaaaaca gcgattttat
    44641 accgcttgca acctctgctc tcgcccgagc cagagcggat tggctgtatg gtatcaatat
    44701 gacccgagcc tataccctac aggggcgttg ggcaggctat aaaggcgtgt tatcagtcgg
    44761 acgtgtgcaa acgccggtat tagggctgat tgttcgccga gatctggaga tcgagcattt
    44821 cgtgccaaag gattattttg aggtgttggc acagattgtc gtgccggaaa cccaagagcg
    44881 atttaaggcg cagtggcaac cgagcaaagc ctgtgaagat tatcaagatg aagatgggcg
    44941 ggtgctgtct cgtccattgg cagaaaatgt ggtaaaacgg attaccgacc agccggcaac
    45001 cgtcaccgaa tatcaaaata aaattgaaaa agaaactgca ccgctgcctt attctctttc
    45061 ggtattacaa atggaagccg ccggcagata tgggctatcc gcccaagcgg tgttggatat
    45121 ttgccaaaag ctgtatgaaa cccataaact aattacctac cctcgttctg ataatcggta
    45181 tttgccgacc gaacatttca acgacagatt taaagtgatg gcggcgattg ctcatcattt
    45241 acctgaatat caacaaaaac cggaagtgat tgatgccact attcgcaatc gttgctggaa
    45301 tgataaagag gtggaagccc accacgccat tattcccact gcacggcaag ggacggtaca
    45361 tttaaccgaa aatgaaaaaa gagtttatca actcattgcc cgccaatatc taatgcaatt
    45421 ctgccctgat gcggaatatc gcaaaagtaa aatcgggctt gaaattgcag gtggtagttt
    45481 tgtcgctcaa gcacgcaacc ttgtaattgc cggctggcga gcgttactgg gtaaagaaga
    45541 tagccttgac gatgcagagc cactactacc gattgtcaaa aaagggcaaa tcctccattg
    45601 tgaaaaaggg gaaattgtca gcaaaaaaac acaaccgccc cgccacttta ctgatcgcag
    45661 tttgctttca gcaatgaccg ggatcgcccg ttttgtacaa gataaagaat tgaaaaaaat
    45721 cttgcgtgaa accgatggtt taggcacgga ggcaacccga gccggtatta tcgaattgct
    45781 gtttaaacgt ggttttttaa tccgtaaagg gaaaaatatc cacagtaccg aagccggcag
    45841 aatattgatt caagcacttc ccgactctgc tacccagccg gatatgaccg ctcattggga
    45901 aatgcagctg aatcaaatca gcaaaaaaga gaccagctat cagcaattta tgtttgatct
    45961 aaaccaacag ctcccacatt tattacaaag cccaaaccgc caagtgttgc aaaatttagc
    46021 gaaaatcaca ccgcttgcaa gcggcaataa acctcgttat tttaaaaagc gaacacaaac
    46081 tgctgaaaat taaatcaagc aggtaaaaat tactgtttag cacttgtcaa acgggcgtaa
    46141 attctatatt atgcacgcca ttgcaaattt cgcataaaga atacaagaga ataaattaat
    46201 gttaattaat gtactcacta ttgtttatct tgtagttgcc gtattactga tcgcatttgt
    46261 attaatgcaa caaggtaaag gcgctgatgc aggtgcttct ttcggggcgg gtgcttcagc
    46321 aacagttttc ggctcagcag gatcagcaaa ttttttatca agaacaactg ctctacttgc
    46381 aacgattttc ttcgcaatta gtttagttat cggtaattta agctcacaca atgtagcacc
    46441 gaaaagccaa tttgaagact taagccaagt tgaacaaaag caagtagaac ctgtaaaaat
    46501 agaaaatagc gatatccctc aataatcgct taacattaaa aagaataaag ctctggtggt
    46561 ggaattggta gacacgccat cttgaggggg tggtggacac agtccgtgcg agttcaagtc
    46621 tcgcccagag caccattcaa ctaaatttgg ctcaacggag ctaaactaaa aaagccttag
    46681 aaagcctgta aaatcaacat ttacaggctt ttttactatc ttaactcaac ggctctaaac
    46741 gtttcctatc acaaatttta gttacacgtt tagttacacg ttttaaatcg tgttactata
    46801 ctttcaataa tcgtgtaaca cttcgtaggt ttaatttatg gctagaacaa ctaaagcatt
    46861 aaataaaact caaatagaaa atgccaaatc aaaggataaa gaatatattt tatccgatgg
    46921 cgatggatta aatcttagag ttaaacctct ccctaaaggc tctaaaattt ggatttttaa
    46981 ctacactaac ccacaaacta aaaacagaac aaatttaact attgggcgtt accccttaat
    47041 tacacttgcg gaagctcgca ctatatgtga tggctaccgc tcgttaatag agaaaggcat
    47101 agatccacag gaagaaaaaa agcggctgca acaagaagca gaaaatcgag taaatgatac
    47161 tttccggaat gtggccgaaa gctatttcaa tggtatttat aaagagaaag caaaaaatcc
    47221 gattactcgt gaaaagaatt ggataaggtt agaaaatcat attttcccct atatcgggga
    47281 taaacacgtt gaagaaatca aagtaaaagc ccttgttgat atttattcta aagtggcaga
    47341 taaaagcaac acattaaaaa aactgcatca gcttgtatct gctgtaatgg atcacgccat
    47401 tacgcaaggc attatagaaa gccataactg ccgattagca gttaaaaact tttatatcaa
    47461 gccatctacg ccaaatccca ctattgagct tgaagaatta ccgcagttat ttactgattt
    47521 acataatgcg aagttatcaa agcaaactta cgcccttgtt tgttggtcgt tcttgactgc
    47581 tctacgccca aatgaagccg ttaatgctga atggaaagaa atagactttg agaaaaagct
    47641 atggaatatc cctaaagaga agatgaaagg aaaagcagat aaaaaacgcc ctcactctgt
    47701 gccgttatcc tcccaagcgt taaagatatt agagatgatg aaaatgcact ctaattctag
    47761 cccttttgtt tttccaggtc gttcatcaaa tagtaaacca atgagcaacg caacggtaaa
    47821 ttcaacatta aaaaggaatg gatataaaga tagactaacc gcacacggta ttcgggcatt
    47881 tgtgaaaaca tttctatctt ctcgcaaagt agatcgccac gtttccgaaa gtatattatc
    47941 ccatttatta gaaggtggag atgatttaga aaacacatac aaccgatatg attttttaga
    48001 agagcgtgtg ccagtaatgc agcttttagg tgattattgc gaacagtgcg gaatgaattt
    48061 agagttagtt cggggttagg gaggtaaaat atatgatttt agtcgtcacg tcatcacttt
    48121 tcccactttc ccctttaaaa tcaaatagtt aagtggtgat gactggtttt aaagtcatca
    48181 ttaagtcatc acaaaaaggt gatgacctag aaaaaaagag gggtttcccc ctctttgcta
    48241 attcaaaata tcactttgaa agtcatcaaa atttttgaaa tgaacgtttg ttcgttgccc
    48301 tttattcgtc tttcgttttg tgaaatcgtg cttattgccg tgttgcttta ctgcttgctc
    48361 aatacctact acaaaagtat ttaagcctag ttctagcaca ttcttagcct taacaaaggc
    48421 taaatatgcc ggataaaggt gcgttcttat tttgtcgtgt ccaagcgtgt tgccagttcc
    48481 gatataaagc ccgtctgtat tttctgttgt atatagatac tcgaaaaaat ccgttaatgg
    48541 gtcagactgc tttttaatct ccaacgcctc taggctctct ttttgctcct ctaaggctct
    48601 tttagcttcg agtgggtcag ggaaggtatc aagcacttta cggataatgc cccctatctc
    48661 taatgtaatt ttatccataa aatacggatc acgttcattt tcaggcggtc ttttattaaa
    48721 acggaaattg acaatccgcc tatctatacc gccattccgt tctgtccatt tacaagggtc
    48781 gttattgacg atcataatca ttgccgcaat tcttgcgtta aatgggtgct tgttcttcgg
    48841 atcgactcgc accatatcac cgccagtaat cgctttcaat ccgccaccat ctccagcgta
    48901 tttcgtttgc tcggaacaga taatcagctt tttatcttcc agccctgcga ttttgcgttc
    48961 atcatcaaag ttttctagcc ttgctgaagc tgtgttcttt tctccagcta atagtgtcgc
    49021 aatgccagca aataccgatt taccgcttcc gcctttccct gttacttgga agaatacttg
    49081 ccagttgtag cggtttgtta aaatcgcata gagagcggct agaatgttct tcgccttgtc
    49141 ttgcttgccg tctgatacaa agttaagcca ttgatcaaag tgtggtgttt cggctacgtt
    49201 ctcgtcatag ctatgtggaa tataagccgt tagccagttt tggcggttaa cggttctttg
    49261 aacatttacc gaataaggtg ggtaaggggt taaagtttcg ggttgcccct tgctattcca
    49321 accaatcacc gtagccggtt gtacttccat tttttgaagc gtgccgaatg gtcgggtttt
    49381 atcgttggct gtcgtgcgtg gataagctaa gaagccttta gcttgttttg tgcctgtacc
    49441 gttggttaaa tcggtttctt cagtttcgac aaaggattct gaaatttctt cagtcagcca
    49501 gcctagaata tctacaccac caaagtctaa aatctcttgc gtggttttcg ggtaagcgta
    49561 aatattatga acggcaatcg ttacttcatt cattttcggg gtggcggttt cggtgcgtgc
    49621 ttcgccttca ccgatatgat ttaccgctgc accgccagcc gatactaatt ttttatattc
    49681 tttgccttgg gtcagtttca ccacgttagc aatttgtcgc ataacagaat catctgttag
    49741 gcgtttcatt acttgcttgt caagttccgg aatcactgaa tagccaccgt ctgcccctcc
    49801 atttgtattc gtagcaagcg aacgcaattc gcctgtttta atccagtggc gaagctcgtc
    49861 atcagatact ttcacatttg cggtttcaac ctgttgcccc ggttggttac gctgttcatc
    49921 agtaatcgct tcataacgtg cgatttcttt tactaaattt tcagcttgtg agcggagttc
    49981 atcaaactta gccccttctg cttcagttgt tgagcgtttt tcttcgtctg ctttggttaa
    50041 aattgaacgc atttctgctt caatagccgc tttttgttgg cggagttcta aaagtttttt
    50101 aaacattgcc ttatccttaa ttcaaataat tgatattgta gtgaagcgtt gctgttttcc
    50161 acgctgattc gttagcatca taatcatagc tatacttagc cagcacacat tcgtccatac
    50221 tgtggaatgt ggcttgattc atcacatcac tgattttttg agccactaaa tctaggtcgt
    50281 tttcggttga aaacattggt aagtaaatgc cgattttcaa ataggcgttg cattcgccat
    50341 cgcaaagcgt gagttggcta tattccgctt catcaatgaa tacggcgata gccggtaatt
    50401 cattttctac atcggtgaat acggctcggc cgttatggaa atgttgaatg ccttgaatgt
    50461 taccttgtaa taagtcgata acttcttggc ggattgcttc gttagaaatc ataaaaaagt
    50521 cctcttaatt aagaaggcta caattagcca cagaacaata taggcataat ttcaacggag
    50581 taaatagggt aaaatttaat cgtttagcta cgtttgaaca cgttaagagg ataattttta
    50641 aatgattatt ttttattcaa caaaagacaa aatggaagga aataaacgaa taattttata
    50701 gaagtgatga ctgtgactac ttagtgacga cttaaaaata agtagtcact atattaatat
    50761 gttgatatat aagggatttt tctattttag tgatgaggtg atgacttgtt ttataaaata
    50821 attttctcta agctaaacca cttgatataa tgccaaaaaa tcattgttac acgtttagtt
    50881 acacgatata gagccaataa ataatttcca cttattaatc aataggttaa
//
LOCUS       DANMCL010000005        47831 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.005, whole genome shotgun sequence.
ACCESSION   DANMCL010000005 DANMCL010000000
VERSION     DANMCL010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 47831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47831
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.005"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..539)
                     /locus_tag="PXF40_000254"
     CDS             complement(<1..539)
                     /locus_tag="PXF40_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015981653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801633.1"
                     /translation="MEQKYKTILTHHGERVIVEALANKIPVPLKEMAIGDGNGSSITP
                     SASQTTLVREVYRAEITDLLEDPQNRHQMIAELLIPENVGGFIVREIGLFDEQGGLVA
                     VANCPENYKPVLEQGSGKVQYYRMILQVSSSDAVTLSINNNIVYATRTEFNEFVNNLS
                     SPDGYKHIGRCKSVAELRT"
     gene            complement(542..1174)
                     /locus_tag="PXF40_000255"
     CDS             complement(542..1174)
                     /locus_tag="PXF40_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HDL5801634.1"
                     /translation="MNTVKALLPPGSSLLEKRAAECLQQAVQNPIKFANLINPHKCPV
                     KFLPYLAWALSVDYWEEHWSEELKRETIIRSFEEHRKKGTASAVRRIVESLGYAFEIR
                     EWFAEKRQRQPGTFRVFVELKDKGISEKIYQELERLIEDAKPVSRHITELAVSATSKG
                     KANIFSGAHSGEIITIYPPKKLPVIVIKSKMDLFSATNSGEIITIYPNKR"
     gene            complement(1161..2078)
                     /locus_tag="PXF40_000256"
     CDS             complement(1161..2078)
                     /locus_tag="PXF40_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HDL5801635.1"
                     /translation="MSEIVDLSKLPAPKVLEELDYETLLAERKAKFLSLYPESERAVM
                     AARLALESEPITKLLQENCYLQLLERQRINSAAQATMLAYATGTDLDVIAANFNVERL
                     VVQAEDLTASPPIVEELEPDDDFRQRVQLKIESVSVAGPRKAYTFHALSANGKIADVS
                     VISPQPAYVTVTLLSRDGNGAVASEIINAAKIALNDEEVRPIADRVTVQGASIVEYEI
                     NAVLHLYRGPEKEPILKAAKANLEAYINQTKRIGRDVTHSGIHAALHVAGVQNVEILQ
                     PRTDLVLTPYQAGYCVNYTLNVEVSDEYS"
     gene            complement(2075..2410)
                     /locus_tag="PXF40_000257"
     CDS             complement(2075..2410)
                     /locus_tag="PXF40_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5801636.1"
                     /translation="MNRETGEQLEDEVEHIKQSIKDILLTAKGSRVMRRTYGSNLYKL
                     TDKPIAASLIMQLSAACVMALQQWEPRIAITRFKVEFAEDNYNKLICTLDFTLKHRKI
                     SIKGMRFTL"
     gene            complement(2410..3015)
                     /locus_tag="PXF40_000258"
     CDS             complement(2410..3015)
                     /locus_tag="PXF40_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5801637.1"
                     /translation="MSEPNHAEQIRRLDNIIRLGTIAEVDLTTATARVNSGGITTDFL
                     PWLTFRAGTSQTWSAPTVGEQCVVLSVSGEFTTGVILFGIYTQNAPSQSADEHLFRFS
                     DGAEISYNTASGQLTVKNCKVVIVQATESITLDTPTVKATKNVVIGGNLSVKGTTSSQ
                     GAISTQGAVTAKGDVSGAGISLGSHHHIEQGDGRPTSGAKP"
     gene            complement(3144..3431)
                     /locus_tag="PXF40_000259"
     CDS             complement(3144..3431)
                     /locus_tag="PXF40_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5801638.1"
                     /translation="MAKITIKPQALSQFDEIVKSVIEFTGFETSGIRLQSDIFDKIEQ
                     IAFMPLSGRAREDGTRETFVRRYRIVYDYDRQADEVIILAIIHSSRLYPRP"
     gene            complement(3424..3603)
                     /locus_tag="PXF40_000260"
     CDS             complement(3424..3603)
                     /locus_tag="PXF40_000260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801639.1"
                     /translation="MMFKEKGYDEFVNECVRKGREEHKAGLGFTLEQSRLHIKKTIEQ
                     KSQELNEFQREVVYG"
     gene            complement(3665..6577)
                     /locus_tag="PXF40_000261"
     CDS             complement(3665..6577)
                     /locus_tag="PXF40_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801640.1"
                     /translation="MSNNLKIQVVLSALDKLTAPFKSVVKQTEKLSQSLKVQRDELKA
                     LEKTQSKMQSFKKMDDSIKKSNETILKQTKHLDNLKNKISQMKNERIELKVKMDAKKR
                     EFQQITKGGSAWSARAAFLDKDFEKMQREYEKLGASISSVSRKRTEENRALKDSRHQQ
                     AKQLLYFRSLRRELRASGINIKAFAQSETNLTDKIAKANQLIDQQKAKLEKLNAVKAR
                     NEKYWATVEKVKNTSERLHNLGQRSMISGAAISAPVVGLGKGVVGMAQTAGKFEQFNA
                     ILEVTEGSAEKAKQSFDWVKQFAVDTPSNLDEAMEAFVKLRAYGLDPTNGLLQTLGDT
                     GAAMGKPVMQAVEAIADALTGENERLKEFGIKGSVVKGTNIIEYAYTDKLGKQQVAKV
                     NKNNRKEIEQTLTRIFNEKYAGAMEKQAKTLVGIWAKIEDYWTNFQMQVMESGAFDWI
                     KNKLQWVLDSLDKMAENGELQKWAEDVGAVIQETVQGLWAFGEKIIEVVKWLASLARE
                     NKGLIATFVKWSAILGSSLTVLGAFAVVASFALYPVARLALGIGKFTGASTLLNKALF
                     DSNDKFRLFNKSLYSSGTTAAFVKSKFNQLATLPNVLGSSFNKLGGGIKMLIPQLKTK
                     VFWLNMLKGILGKLWSAIRFIFSPLKLLLGIFSPIGLAITAISVAGVALYRNWEKVRA
                     FFGGFLQGLSKGLAPVLERFKPLGKLFETISNWVKSTFKWLSDLLTPADKTSESLDKA
                     SSAGEKFGLALAGAIDLVTSPVQWLVDQFKWISENMPSWDTIGEGVKKAATAIVPTEH
                     AKQITKTAEMSNNMYDPNYTPPQLEQKWIGGLVGNGKGRGFATGGYTGNGGKYEPAGI
                     VHKGEYVMTKEATARLGVANLNRLNYGKVAGLTALASSVAFAQPMPAVKIDSRPPLTA
                     SQPSPTVAPVSQNIHITINATGGQDPQAIARLVAMELEKQQRQAQARARSSLRDRG"
     gene            6616..6894
                     /locus_tag="PXF40_000262"
     CDS             6616..6894
                     /locus_tag="PXF40_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801641.1"
                     /translation="MEILFILLGLIGFGALLAIGFTTFAAIFGVVTTVFLSLLSLLAN
                     MVGLSIIVILISLYVLLPLNTFILIALIFSAILGFLCWYHSDRQSVNQ"
     gene            complement(6945..7403)
                     /locus_tag="PXF40_000263"
     CDS             complement(6945..7403)
                     /locus_tag="PXF40_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5801642.1"
                     /translation="MSEPIEQVKTAFDSLLNNISKPRRRLMYQQIGRELARSQRRRIK
                     AQQNPDGSAYEPRKKPKKGVKSKIKSGKMFDKITQPRFMRLRLESEGVSLGYEGGDAV
                     IARIHQQGLIGRVRKDWDLKVKYASRELLGFTDDDLQMIEDYMINILAGS"
     gene            complement(7396..7881)
                     /locus_tag="PXF40_000264"
     CDS             complement(7396..7881)
                     /locus_tag="PXF40_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801643.1"
                     /translation="MIKPDRLRAVLTQTIDIFQANPEKLILQYDKGKIKSKGSQSHSF
                     EYHYDLELIVVDFPYHPDVLFVPVLNFVRNEQWELLQNPELQDKIEFEIDHNNHESYD
                     IYIRLPLTERVIVKEQDGHLTATHADEPNLADVSPFTRLTEYEVYLKDELIYQWAEPN
                     E"
     gene            complement(7878..8099)
                     /locus_tag="PXF40_000265"
     CDS             complement(7878..8099)
                     /locus_tag="PXF40_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HDL5801644.1"
                     /translation="MSDQIDRANELAEKAREAALAKILQNQTACTSLFECEDCGEPIP
                     EKRREMVIGCTRCIECQTIYEHKQKGYRR"
     gene            complement(8248..8703)
                     /locus_tag="PXF40_000266"
     CDS             complement(8248..8703)
                     /locus_tag="PXF40_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801645.1"
                     /translation="MIVKLCQMTNKHFSPLMIVLVLVGVLANFVQFRQNESLKADLQA
                     RTTQNQLIQADNRNLANQLENSQIQLEAYQKQVDDLNQKVLAKMKQAEQRSNEILNEL
                     EKHKKWADSAVPPSVGKLLNQRKRAVSHPQIEPDNLSEKAGVPNTGNRD"
     gene            complement(8700..9266)
                     /locus_tag="PXF40_000267"
     CDS             complement(8700..9266)
                     /locus_tag="PXF40_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5801646.1"
                     /translation="MSKSVKVGVFVCSVAAIIGTVKQYYSSEIRTSETGLAIIGNAEG
                     CRRDPYKCPADVITVGIGSTEASGEKINVNHKYTDKEIAERWIKDLKIAERCINRYFN
                     GDKMNENQFSAMVSAAFNMGCYNLRFYPNENGKYIQTTIHKYAMAKDFKAMCNRIPDF
                     NRSGGKVLRGLKIRREKEKALCLGQEVK"
     gene            complement(9259..9465)
                     /locus_tag="PXF40_000268"
     CDS             complement(9259..9465)
                     /locus_tag="PXF40_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HDL5801647.1"
                     /translation="MHKTEQASYFGAIFGFFGSLTLSDWGVVVSILVAILTLLLNWAY
                     RAKEYKLKEREFELKLQNQGKKNE"
     gene            complement(9471..9683)
                     /locus_tag="PXF40_000269"
     CDS             complement(9471..9683)
                     /locus_tag="PXF40_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5801648.1"
                     /translation="MNTLIARQDDTLDELIFRHYGQTAGLVEQALEYNPELAHLPRLP
                     IGTVVTMPDIESRFATVAKSSVQLWD"
     gene            complement(9680..10195)
                     /locus_tag="PXF40_000270"
     CDS             complement(9680..10195)
                     /locus_tag="PXF40_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HDL5801649.1"
                     /translation="MEQRNHVISIPKVNGYESSKNAIKPTAESDETITNNGFFPNIEL
                     LEVRNAMRIDGTVINERLKQAVIEAMATVNADLKAYRLNAEQAQKANLQACDDEQING
                     ESVLVYKYKRAVYCLAVANLYERYRSYDSTKDGHDKAEELESTAGDLKRDYHFAVRDI
                     LGENRMISELI"
     gene            complement(10307..10996)
                     /locus_tag="PXF40_000271"
     CDS             complement(10307..10996)
                     /locus_tag="PXF40_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HDL5801650.1"
                     /translation="MRMSPARAHFLRKTAESESATPNRENLEGLQGYDLVLAQLKAHQ
                     RQLKKIQSIERKIEFKRNNFEQYRPWVEGSLAKGSGVQDTVITTMLIWSIDIGDYPTA
                     LAIAQYVLMHDLAMPEQFERTPATALVEELAEAAKKARDQKQPFEAAVLKQANDLTAE
                     FDMPDPVRAKLLRELGELIQEAEPQTALEHYQRAIALDPQCGAKGLRDKLEKQLAKQA
                     EEPKPAEEQNE"
     gene            complement(11006..12034)
                     /locus_tag="PXF40_000272"
     CDS             complement(11006..12034)
                     /locus_tag="PXF40_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HDL5801651.1"
                     /translation="MKDLTLEKYNAYLARQAELNNLPFNALATGIKFTVQPSVQQKLY
                     EKVRESSDFLKSISFVFVDEQTGETLGLDSAHTVASTTDTSGDGERKTTSIAKLVKQT
                     YHCQQINFDTHINYKQLDMWAKFPDFQQKVANVAAKQRKRDLIMIGFNGTSRAATSDR
                     NSNPLLQDVAKGWLQKMREDAKERVMNGESTDNQVLVGKGQEYANLDALVMDATEELI
                     DEWHRDDTDLVVITGRKLLADKYFPIVNQQNAPTEELAADIVISQKRIGGLKAVRVPF
                     FPANAILITKLENLAIYVQEGTTRKHIENVPKKDRIETYESENIDYVVEDYGCAALIE
                     NITLKDKE"
     gene            complement(12048..12875)
                     /locus_tag="PXF40_000273"
     CDS             complement(12048..12875)
                     /locus_tag="PXF40_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HDL5801652.1"
                     /translation="MTTKSKWFVVATEGATTDGREISREWLTQIEENYDPKNNYGARI
                     NLEHFRWRWFEKDDPHSYSYGDVLAVKTEEREDGKLQLLAEIAPTEALVKLVKDKQKV
                     YTSVEIDLNFADTGEAYLVGLAVTDTPASLGTEYLTFCAGATHNPLADRKQKPENLVS
                     EAVEANLEFTAEPEKGAWLEKFKAMFTKAKTDNDGKFAEHEKAMELLAEQFSKVSTEN
                     DRLQTELSTLQIEFTELQKQAGEFAEKFAKLEQEPSANYTPRPKATGAKAGDVQTDF"
     gene            13025..14827
                     /locus_tag="PXF40_000274"
     CDS             13025..14827
                     /locus_tag="PXF40_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HDL5801653.1"
                     /translation="MENENTITEYEVLAANPLHDKREAQSKYWAGYTVTEISRQLNIP
                     VSTIASWKKREKWDEISPVGRVEATLESRLNLLIMKESKNNNDYKEMDALRRLLESTA
                     RIKKYSNGGGNEADLNPNIKNRNKGDRKKPEQNAISEEQAELLINGFLDGMFHYQKKW
                     HEAGLTHRIRNILKSRQIGATYYFAHEALVDALVTGRNQIFISASKKQALQFRAYIVA
                     YAKRVADVELKGETITLPNESQLIFLGTNSKTAQSYHGNLYFDEIFWVNRFEEIRKVA
                     AGMASQKQYRITYFSTPSSITHSAYLLWSGKLFNRKRPKAEQVEIDISHANLKNGKKC
                     GDGQWRQIVNIYDAEAGGCNLFDIEQLKLENSPDEFEQLFMCEFIDDNQSVFKFTMMQ
                     RCLVDSMEVWRDYVFTDGYQRPFGNKEVWVGYDPSYTGDRSALVVIAPPKVDGGKFRL
                     LEYRTFKGADFAEQAAEIVAICAKYNVTRLAIDTTGLGVGVYEIVKKERPDAVALTYN
                     VELKSKMVLKGLDIISKGRFEFDSMHAVEVGASFMAIKKQITNSGRQVTYVADRSEEA
                     SHADLAWACLQVFINEPFDGKLEETTGTVDFLDD"
     gene            14836..15876
                     /locus_tag="PXF40_000275"
     CDS             14836..15876
                     /locus_tag="PXF40_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL5801654.1"
                     /translation="MKKQLRKNLTQNDRLQPQAQTEIFSFGDPIPVLDRADILNYLEC
                     SAMYEKWYNPPMSFDGLAKSLRSSTHHESAIITKANILLSTCEVDSRYLSRRDLSSFV
                     KDYLVFGNAYFEVVRNRLGQVQRIESPLAKYVRKGLEAGQFYYVPQRFDHQEHEFAKG
                     SIYHLLEPDINQDIYGLPQYLSALQSAWLNESATLFRRKYFLNGAHAGFVFYMSDASQ
                     KQEDVENIRQQLKQSKGVGNFKNLFVHAPNGKKDGIQIIPIADVSAKDEFFNIKNVSR
                     DDVLAAHRVPPQLMGIIPNNTGGFGNVADAAEVFFITEIEPLQERLKEFNQWLGQEVI
                     KFKPSKLLQRTQ"
     gene            complement(16652..17656)
                     /gene="gap"
                     /locus_tag="PXF40_000276"
     CDS             complement(16652..17656)
                     /gene="gap"
                     /locus_tag="PXF40_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HDL5801655.1"
                     /translation="MAIKIGINGFGRIGRIVFRAAQHRDDIEVVGINDLIDVDYMAYM
                     LKYDSTHGRFDGTVEVKDGQLVVNGKAIRVTAERDPANLKWNEIGVDIAVEATGLFLD
                     DETARKHITAGAKKVVLTGPSKDATPMFVNGVNFDTYAGQDIVSNASCTTNCLAPLAK
                     VIHEKFGIKEGLMTTVHATTATQKTVDGPSAKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPALNGKLTGMAFRVPTTNVSVVDLTVNLEKPATYAEICAEIKRASENEMKGVLGYTE
                     DAVVSTDFNGATETSVFDAAAGIALTDTFVKLVSWYDNEVGYSNKVLDLVAHVYNYKG
                     "
     gene            17881..18276
                     /gene="msrB"
                     /locus_tag="PXF40_000277"
     CDS             17881..18276
                     /gene="msrB"
                     /locus_tag="PXF40_000277"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HDL5801656.1"
                     /translation="MIKPIHALTEQQVDILINHGTERPFTGKFLNEHRVGIYRCARCH
                     NDLFHSDTKFDAGCGWPSFYQTISESSLRYLDDYSLGRHRIEIRCGNCDSHMGHVFPD
                     GPPPTGLRFCLNSAALNFKWEETGEEIDG"
     gene            complement(18363..19445)
                     /gene="leuB"
                     /locus_tag="PXF40_000278"
     CDS             complement(18363..19445)
                     /gene="leuB"
                     /locus_tag="PXF40_000278"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HDL5801657.1"
                     /translation="MQTYNIAVLAGDGIGPEVMAEAIKVLEATQQKFGFKLNFNQYNI
                     GGAAIDAQGKALPENTLKGCEEADAILFGSVGGPKWTHLLPDEQPERGSLLPLRKHFS
                     LFCNLRPAALYQGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGRDGEGAQTRA
                     FDTEVYYKYEIERITRVAFESAMKRKKHVTSVDKANVLQSSILWRETVTEVAKEFPEV
                     TLEHMYIDNATMQLIKAPESFDILLCSNIFGDIISDEAAMITGSMGMLPSASLNEQGF
                     GLYEPAGGSAPDIAGKNIANPIAQILSAAMMLRYSFNLGDAADAIETAIQKALADGYR
                     TADLADDSKPLSTSEMGDIIAKNILA"
     gene            19575..19805
                     /locus_tag="PXF40_000279"
     CDS             19575..19805
                     /locus_tag="PXF40_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HDL5801658.1"
                     /translation="MKLTACKLVFLLYLMFNLTACGTVLSLVEQDYRVYAGVIKDFQV
                     MQEGGIFAVLAVIDLPLSFVLDTLMLPVTLSQ"
     gene            complement(19814..20866)
                     /locus_tag="PXF40_000280"
     CDS             complement(19814..20866)
                     /locus_tag="PXF40_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5801659.1"
                     /translation="MALLDIRHLSIEIDMPKGRVKMVDNINLTVDEGEICGLVGESGS
                     GKSLIAKVICGMIKDEWIVSADRFRFDDIELLKLSPAERRKLVGDHISMVFQDPLTSL
                     DPSQQIGKQLMQTIQFRGKWWQRFGWKKKKAIELLHRVGIRDHQDIMKSYPSDITEGE
                     AQKVMIAMAVANQPRLLVADEPTNIMESTTQLQVYRLLSSMNQNLGTSILLVSNDMRS
                     IQNWVDSYNVLYCGQTVEIADKESILESSYHPYTRVLLNSSPDFSQPLAFKSSLNTLR
                     GSVPMLQEMPIGCRLGPRCPFAQKKCINKPPLVKVKQHEFACHFPINFREQNLLKNKT
                     ENTPFVVAEIAEKEAF"
     gene            complement(20937..21830)
                     /locus_tag="PXF40_000281"
     CDS             complement(20937..21830)
                     /locus_tag="PXF40_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5801660.1"
                     /translation="MAVIKEPEQFRETNAFKAFWFHFRQDKLALGSFYLFLLLLALIF
                     VGSLLAPYNYNEQFVGLELMPPSWDDKGQISHFLGTDDLGRDILSRIMYGFYYTLGSA
                     LMITLLIAIIGGMIGIYAGLKKGRSFWLISHLFDTFLFMPILLIAIIIATLMEASLVN
                     AMLAIFLAMLPHFIHKIYQATEKQLKKEYIITLKLDGASCWYLIREVIIPNLTGVAIK
                     ALSHIFVIAILDISALSFIMLGAKSPTPEWGAMIRESMELIYIAPWTVILPGLAIIFS
                     IFTVTILGTRLSVIFEKYRKE"
     gene            complement(21817..22782)
                     /locus_tag="PXF40_000282"
     CDS             complement(21817..22782)
                     /locus_tag="PXF40_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5801661.1"
                     /translation="MLIVFFRKIFLTLITLIFLSLISFNILLRDPLNHLAELGWFEAY
                     CYYVKSLLNGDFGISFSNGEPLTAQILQVFPATITLCLSALIVSLIIGLPLGFFAATQ
                     QKNMVGRLLNTLGSLSLAVPVFWLALVLMYYASLNQWEVSAIGEIHSLYPKQMVTGFL
                     LLDIWLSDVPYKLKMMQSALHHLALPTLVLAVPATLEVMHITQARAGYVMKQNYIKIA
                     KTRGWTPFRVWRTHIICNTLPALLPMIARTFILIFAFGMLIENIFSWGGIGRWLINAL
                     AIQDYNAISAGVVAIGVFVLLVDMVTGFVRVMLDPSDKKDWYGSY"
     gene            complement(22785..24536)
                     /locus_tag="PXF40_000283"
     CDS             complement(22785..24536)
                     /locus_tag="PXF40_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5801662.1"
                     /translation="MNKLAVIFSVCFANLGLNSTAYAAPSIPQELLENSLVYCTTSSG
                     FSFNPQKSDVSSNMNVVTEQIYDKLVEFNPKKNRLEPALAESYSISDDGLVITLRLRK
                     NVAFHTTPWFTPSRKLNAEDVVFSLKRMIGKESDLPEVKSEPESVLHHQRQSYIYQKT
                     AGQIYFPYFESVDLANKIASIHSPSNDIVKIELVRPDSALLAHLASQYAVILSKEYAL
                     QLNADDNLVQLDLLPVGTGVYQLESYENNDYVRLKPNMNYWGKKAYIQNMVVDFSTEA
                     TGRMAKFLNNECDVVAFPEPSQLSVLNNRQLISSKGANLVYLAFNMQRGIGQDLALRQ
                     RIARGINRKRIAEKLFYGTGEVADNLLPTALWSKKNNGSYPYQPHQNSGEQAVEMHDS
                     IINRSLDSKTETEEVNQKQRLKLWVIDEKRVYNQHPLKMAEMIRADLATQNLEVEIRA
                     VSRAYLVQQLANKSADYDLILGGWLANNLDPNSFLEALLSCKAAETVTNLSNWCNEDF
                     DFWLQTARLSDDPASANLLYEFAQKLLEEQLPILPLMNANRVLVIKDGVKQADISPFG
                     QVKLSELRLGLGHKKGN"
     gene            complement(24529..25488)
                     /locus_tag="PXF40_000284"
     CDS             complement(24529..25488)
                     /locus_tag="PXF40_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HDL5801663.1"
                     /translation="MVVNPESFEQIIGQSVKIKEVVEQAKKFANLDAPLLIQGETGTG
                     KDLFAKSCHHFGSRRMQKFIAVNCAGLPAEEAESEMFGHRGNGVESVGFFEYAHGGTV
                     LLDSISELSLEMQAKLLRFLNDGSFRRVGEDQEIQVNVRVICTSLQPLSLLVEKGKVR
                     EDLFHRLNVLTLNLPPLRDRKEDIPLLADYFIAQISNQLGVSKLEYDNVFLQALQNYH
                     WRGNLRELYNALYRACTLSHSYRLAVKDLHLPRDMEAMIEVREEATLEEMMSQYEAQL
                     LHQFYAEYPSTRKLAQRLGLSHTAVANKLRQYGLTKNGNSKDE"
     gene            25797..26378
                     /gene="lpcA"
                     /locus_tag="PXF40_000285"
     CDS             25797..26378
                     /gene="lpcA"
                     /locus_tag="PXF40_000285"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HDL5801664.1"
                     /translation="MYLEQIKAELQEAADVLDKFMSDEKNIKLIQDAAMLIANSFKQG
                     GKVISCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHLSCVSNDFGYEYVFS
                     RYLEAVGQKGDVLFGLSTSGNSKNVLNAIKVAKEKGMKVIAMTGKDGGQMAGLADVEI
                     RVPHFRYADRIQEIHIKVIHILMMLIEFEMEKA"
     gene            complement(26419..26871)
                     /locus_tag="PXF40_000286"
     CDS             complement(26419..26871)
                     /locus_tag="PXF40_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HDL5801665.1"
                     /translation="MQFEQHFEANFWQNKSLLEMNDAEWEALCDGCGKCCYRKYIQGR
                     GRRERLYYTSVACNLLDVNTGRCMNYSNRFKIESDCTKLTKKNLPDFGWLPKTCAYRL
                     LYEGKPLFDWHPLISKDPDSVKNAGMLIANGIHEKDVIDWFEFVIDEV"
     gene            complement(26875..27195)
                     /locus_tag="PXF40_000287"
     CDS             complement(26875..27195)
                     /locus_tag="PXF40_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjQ family protein"
                     /protein_id="HDL5801666.1"
                     /translation="MIITTTPTIEGKQIVEYKGLVFGEVVSGANFIRDFLAGITDIIG
                     GRSGAYESKLNGARKEALAELAKEAQKVGANAVVGVSMEYQSMGGDKGMFIVVATGTA
                     VVIR"
     gene            complement(27192..27791)
                     /gene="rdgB"
                     /locus_tag="PXF40_000288"
     CDS             complement(27192..27791)
                     /gene="rdgB"
                     /locus_tag="PXF40_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HDL5801667.1"
                     /translation="MEKTKIVLATSNADKVKEMADVLSQFGFEVVAQSEFGIESPEET
                     GLTFVENALIKARFAAKMTGLPAIADDSGLSVMALGGEPGLYSARYAGEQATDADNRQ
                     KLLAKMQGQENRLAKFVSCIVFLKHETDPTPYIASGECFGEILTEERGENGFGYDSLF
                     FYPPKACTFAELETKEKKAISHRAIALEQLKQQLAGENK"
     gene            complement(27834..28352)
                     /locus_tag="PXF40_000289"
     CDS             complement(27834..28352)
                     /locus_tag="PXF40_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5801668.1"
                     /translation="MQFRKAVEADFETILAIYNQAIPTHQITADLELATTQNRRKWFD
                     FHLETAQYPIWVVEDEKGIAGWFSFSPFYERPAFLHTSEISIYLDRYSKGKGYGSKII
                     EFMQAEMLNHNIHTLMAYVFELNTVSQNLMRKHGFEQWGRFPNIANMGKDEKGEDKWR
                     TLLMMSYQKGIE"
     gene            complement(28403..30094)
                     /gene="narQ"
                     /locus_tag="PXF40_000290"
     CDS             complement(28403..30094)
                     /gene="narQ"
                     /locus_tag="PXF40_000290"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HDL5801669.1"
                     /translation="MIKAKYSIARRIGLYFLIMIGFASIISGISLGIMWSNKSDASLI
                     NVSGSLRMQSYRLLSEMDSKKALLPERLLEYHRTLHATELSSLKQSVLLPDSVIESYQ
                     QLLKDWYEMQSYVAQGDKVNYASHIEDYVQRVDDFVFRLQEFAELKLKIATGVIAIAM
                     LLIIALAYIGVWYTRKKIIGPLRQLVKASWQIQNKDFDHVKLAVNEPNELGLLSSTFT
                     EMSNELLKLYTSLEDKVQDKTRRLLAVNRSLLVLYQCSQLLTAKPINKEVLNQVLKTV
                     FDNEHLLGIDLQVYGAEYWNVSIDNKPSLDWVSAEIAIENEKLGILSWKPSLVCPGER
                     LIQNVSEMIGRSLYVVQMQKQQQQLVLMEERAIIARELHDSLAQSLTFFKIQVSLLKL
                     AKTDEKRNEILTVFEKALNDAYSQLRELLTTFRLTIQEANLQQALEKILESLRPKTSA
                     QIRLSCKLPSHMFNAQQQVHVLQIVREAVINAIKHSQATEINVIAETNDDGEHCLTIQ
                     DNGVGLAAHTQPEGHYGLTIMQERAAELKAEFSIENVESGGVKVQVLLPSMISKR"
     gene            complement(30097..30915)
                     /locus_tag="PXF40_000291"
     CDS             complement(30097..30915)
                     /locus_tag="PXF40_000291"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HDL5801670.1"
                     /translation="MNYQAIAFDLDGTLLSSNATILESSKEAIKKVREKGIKVYFVTG
                     RHHTAVRPYYVELGLDTPVVCCNGTYVYDFKNEKVLSGNPLSAEIASKLVNDAQAQGI
                     HTAVYFEDAMTYESLNIHFTKFQKWVESCAPEVRPNVYQVENFQQEIDKGVTVWKVLI
                     SDPDLAKMQKFVEKLPPDQVSPEWSWVDRVDITSVGNSKGARLAEVLKTEGIDLQKVI
                     AFGDNFNDVSMLETVGLGIAMGNSEPDIQQKAKKTIGSNNEDSIANELKAQFNL"
     gene            complement(31003..31851)
                     /locus_tag="PXF40_000292"
     CDS             complement(31003..31851)
                     /locus_tag="PXF40_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5801671.1"
                     /translation="MEKKALFRGFLLSTVALAVAACGNLSKVSDEGTTENPVFPKISE
                     SEFNHDGSQFGSWPNWENVRQIEKGMNKDQLYNLIGRPHFEEGLYGVREWDYAFNYRE
                     NGVHKICQFKILFDKNMNAQSFFWYPNGCNGNSSFALTGDFLFDFDKATLTTKGKEVV
                     DNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRRSNTVKARLVQQGVTAQIEAVG
                     YGKANQVKACDGETGQALKDCLRPNRRVEISANCGVMKQNEGGNVAGPNGPAPLYQTP
                     AYDGSK"
     gene            complement(31979..33700)
                     /gene="recJ"
                     /locus_tag="PXF40_000293"
     CDS             complement(31979..33700)
                     /gene="recJ"
                     /locus_tag="PXF40_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HDL5801672.1"
                     /translation="MEKIIKRRPLLTTEIVSTNPLLNRIYQSRGIKNTQELEHNLKNL
                     HRPQQLANIEQAVDLLLQAFREKSRIIIVGDFDADGATSTSLALIALRQLGFDKVDYL
                     IPDRFSQGYGLSVAVAEMVLAKGADLVLTVDNGISSTEGIALLKSHQIQVLVTDHHLP
                     PESLPNADALVNPNLAFCEFPSKSLAGVGVIFYVMMALRSRMREQHLFENKPEPNFAE
                     LLDLVALGTVADVVPLDQNNRILVHQGLQRIRSGHCRLGIKALAEVGKRDLSTLQAAD
                     LGFAIAPRLNAAGRLENMSLGVELLICENMELARRLALDLDSLNQTRKEFEQEMKAEA
                     LSICANLPSLAQSEQAHGIVLYQADWHQGVIGILASRIKDQFNRPVIAFAQESEESEY
                     LKGSARSINGVHMRDLLEHIDMRHPDLIEKFGGHAMAAGLTIHQSKLDLFKQIFDQSI
                     NAIIEPEQLQGIIYTDGELNALEFTLANAEMIRQGGPWGQHFPEPSFEGEFSILQQKL
                     LAGKHLKLMLQSEKGQLFDAIWFNVDVRAFPDLSIKKARLVYRLDINEFRGEKSLQLK
                     VEYLKYI"
     gene            complement(33785..34468)
                     /gene="dsbC"
                     /locus_tag="PXF40_000294"
     CDS             complement(33785..34468)
                     /gene="dsbC"
                     /locus_tag="PXF40_000294"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HDL5801673.1"
                     /translation="MKKNLITLGLMCLSTITFASDAKLKSQLEKIGATDVKISDSPLT
                     GFKMATSNEGVVYISQDGRYVIQGKVFELKNGKAIDITNQGLLAELNSYTNEMIVYPA
                     KNEKHVITVFMDITCHYCHLLHTKIKEYNDLGITIRYLAFPRGGMNTQTAKQMEAIWT
                     SADKVKALNDAEDGKLPTQIKTPDIVKKHYQLGIKFGVTGTPNMVTSEGELIGGYVEP
                     KELAKMLSE"
     gene            complement(34478..36007)
                     /gene="mepM"
                     /locus_tag="PXF40_000295"
     CDS             complement(34478..36007)
                     /gene="mepM"
                     /locus_tag="PXF40_000295"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HDL5801674.1"
                     /translation="MQHVILARDRKRHKKHFKIAVFLLAVFSLFVDIVLALKDQSSIN
                     NTSSQEDIIAIDKQEKYQSINTNLAENNTLHQEQHSSFINYVTDLLTQSALVIEHDDE
                     IVDDQTATSYEDELVGQDDEVEEGIETVENQVPGEKLPEEAEKALEDLLDVADQALRI
                     QNQFSYTVARGDKLKDVLEQSGLTASVAKNLIKQHSALAQLEPGQQFYWVLDNDGELE
                     YMNWLVSEKEERVYERKENGKFSFQRFEKKGEWKLDVVRGTIQNSFAVSLKAVGLSDR
                     QINQLAVGLQSQIATNKLKKGDRFAILIKREYIDGKVTDLGNVEGIHVISSKKSYYAI
                     QADNGRYYSRYGETLSGGFARHPLLFAARVTSSFNPKRRHPITGRISPHKGVDYGVPI
                     GTPIIAPSDGVVEHVAYQARGAGRYIRIKHGHITTVYMHLSKTLVKPGQSVKKGERIA
                     LSGNTGGSTGPHLHYEFHINGRPVNPITVKLPGSNSGMGNKERQAFLNKAKNVESRLK
                     M"
     gene            36232..36978
                     /gene="znuC"
                     /locus_tag="PXF40_000296"
     CDS             36232..36978
                     /gene="znuC"
                     /locus_tag="PXF40_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HDL5801675.1"
                     /translation="MVSLENIEVSFNGQKALQNINLSIYPNSITTIVGPNGGGKSTLL
                     KILLKLLSPNKGKVIHQKGLKIGYVPQKLHLEPSMPITVYRFLALKPHTTKEMINQAL
                     DLFSITHLTENSMQKLSGGELQRVLLARAILDRPQLLVLDEPMQGVDIIGQTELYQLL
                     NKTRDLLNCAILMVSHDLNIVMANTDEVLCINKHICCAGSPEVITHDPSFIHFFGDQF
                     ARNVAFYSHKHNHHHNLHGDICLGECSCEH"
     gene            37143..39956
                     /gene="sucA"
                     /locus_tag="PXF40_000297"
     CDS             37143..39956
                     /gene="sucA"
                     /locus_tag="PXF40_000297"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HDL5801676.1"
                     /translation="MQYTHFDDWLASSALGGANQSYIEEIYEQYLENPANVDESWRNI
                     FDSFPKTPQVEQAHTPIRDYFRKLAREQQPQSVTIIDPEAGAKQVRLLQWINAHRFRG
                     YLEAKLDPINYYRWKTSSVPELDYKYHGFTDEDLNETFTVGRYVYDKDTMKLSELDKA
                     LKETYLGPIGLEFMHVQDIEQRNWLQAKMESVLNKPLFTKAEKLNLLSELTAADGLER
                     YLGAKFPGAKRFSLEGSDAFIPMMKEIIRHASRQGMTDVVLGMAHRGRLNMLVNVFGK
                     RPAELFDEFAGKHADESRTGDVKYHQGFSSNFAVDDKNVHLTLAFNPSHLEIVSPVVI
                     GSVRARQERMRDIEHEKVLAVTVHGDSAVAGQGVVQETLNMANVRGYKVGGTIRIVIN
                     NQIGFTTSNPNDTRSTEFCTDIAKMIQAPIIHVNGDDPEAVAFAARMAVEYRTKFKRD
                     IFIDLISYRRHGHNEADEPLATQPMMYSIIKKHPTPRKVYADRLITEGVLTNEQEIEM
                     LNLYRDALDNGECVVPEWREMDMAAVDWLQYLNYDWTALYESKFPEERFLTIAKRVCE
                     YPASLKAHSRVEKIYTDRKEMYEGKKLFDWGMAETMAYATLLDEGTHVRLSGEDAGRG
                     TFFHRHAVIHNQNDGTGYVPLTQLHANQGRFQVWDSVLSEEAVLAFEYGFATTDPKTL
                     TIWEAQFGDFANGAQIVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARVERY
                     LQLCAQQNIQVCVPSTPAQVYHMLRRQAIRKMRRPLVAITPKSLLRHPLAVSSLDELI
                     NGSFQNVIGELDNIDPKQVKRVVMCSGKVYYDLIEKRRENNQTDVAIIRIEQLYPFPL
                     EEMQQILEPYAHVKDFVWCQEEPLNQGAWYCSKHNFEASLPEDAKLTYAGRPASASPA
                     VGYPSLHAKQQKQLVEDALTIAE"
     gene            40059..41288
                     /gene="odhB"
                     /locus_tag="PXF40_000298"
     CDS             40059..41288
                     /gene="odhB"
                     /locus_tag="PXF40_000298"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HDL5801677.1"
                     /translation="MTIEILTPDLPESVADATVATWHKKVGDNVKRDEILVEIETDKV
                     VLEVPASSDGILAEITQEQGATVVSKQSLGKLVVAKAGDISSATIEQKTESTPSDRKH
                     AAIENSHANADDQGPAIRRLLAEHDLQAADIQGSGVGGRITREDIEKEIAKRVQINQV
                     KGSATSQNTVSTVAFNSRSEKRVPMTRLRKRIAERLLEAKNTTAMLTTFNELDMQPIM
                     NLRKTYGEKFEKQHGVRLGFMSFYIKAVVEALKRYPEINASIDGDDVVYHNYFDISIA
                     VSTPRGLVTPVLRDCDKMSMADIEKKIKELAEKGRDGKLTVEDLTGGNFTITNGGVFG
                     SLMSTPIINPPQSAILGMHAIKDRPVAIDGQVVIRPMMYLALSYDHRLIDGKESVGFL
                     VAVKELLEDPTRLLLEI"
     gene            41581..42741
                     /gene="sucC"
                     /locus_tag="PXF40_000299"
     CDS             41581..42741
                     /gene="sucC"
                     /locus_tag="PXF40_000299"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HDL5801678.1"
                     /translation="MNLHEYQAKQIFKQYGLPVSQGIACKTAEEAVEAIKQLQGEQWA
                     IKCQVHAGGRGKAGGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYLEETC
                     NIDRELYLGAVVDRSAQKVIFMASSAGGMNIEEVAEKTPELIHKAVIDPLTGGQGYQG
                     RELAFKLGLKGDEVKQFADIFVKLANLFVEKDLALLEVNPLVITKEGQLLCLDAKMSI
                     DSNALYRHPELKELQDPSQDDEREAEAEKWNLNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLYGGKPANFLDVGGGATKERVAAAFKLILSDPNVKAVLVNIFGGIVRCDLIADGVIA
                     AVNEVGVNVPVIVRLEGTNAAQGREILANSGLSILAASSLKQAAELAVKSAN"
     gene            42750..43619
                     /gene="sucD"
                     /locus_tag="PXF40_000300"
     CDS             42750..43619
                     /gene="sucD"
                     /locus_tag="PXF40_000300"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HDL5801679.1"
                     /translation="MSILIDKNTKVICQGFTGGQGTFHSEQALAYGTQLVGGVSPNKG
                     GTTHLGLPVFNTVREAVEATGATATVIYVPAPGCKDAILEAIDAGIQLIVCITEGIPT
                     LDMLQVKQRLNQTGVRMIGPNCPGVITPDECKIGIMPGNIHKKGNIGIVSRSGTLTYE
                     AVKQTTDEGFGQSTCVGIGGDPIPGSNFIDILKLFQDDPETEAIVMIGEIGGSAEEEA
                     AAFIKENVTKPVVSYIAGVTAPKGKRMGHAGAIISGGKGTADEKFKILEDAGVTTVRS
                     LAEIGSALRKILG"
     gene            complement(43690..45135)
                     /locus_tag="PXF40_000301"
     CDS             complement(43690..45135)
                     /locus_tag="PXF40_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HDL5801680.1"
                     /translation="MDSIILFFESVLTWIVNTIDGPLWDVTIILLLGAGLFFTLTTGF
                     VQLRLLPQSLREMWGGRSTEGKSLTPFQAFTTGLASRVGVGNIGGVATAIALGGPGAV
                     FWMWITALMGMSSAFAESSLAQLYKTKDPNGMFRGGPAYYITRGLKLPSLAIAFAVTL
                     IFTFGFAFNAVQSNSIVEATKNAWDWNPVYVGMTLVVITGLIISGGVKRIGKVSAQVV
                     PMMALFYLIIAVIILGMNIEKVPSIISLIIESAFDFSAAAGGTFGALVSKTMLMGIKR
                     GLFSNEAGMGSAPNSAATSDAKHPASQGLIQMLGVFVDTIVVCTCTAVIILMSNNYGG
                     ETLRGISLTQSALQFHLGEFGLHFLAFVILLFCFTSIIGNYAYAETNIRYIKNSPWFV
                     WGFRAIVLFFVYFGAVRDGGIVWAFADTVMASMAVINLVAILILAPIVWIILKDYLRQ
                     VKSGKEPVFRIEEHQDLIHKGVDPLIWKSKE"
     gene            complement(45240..46226)
                     /locus_tag="PXF40_000302"
     CDS             complement(45240..46226)
                     /locus_tag="PXF40_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt transporter"
                     /protein_id="HDL5801681.1"
                     /translation="MRLKATYWGMIVIGFLSLFALYQLYPMILFKVMEWQKNFNLQLS
                     ASLNELAENQSKAGITLVFISFLYGVFHAVGPGHGKFILSSYLSFEKTKLNQAMKITF
                     ASALVQGLVAISLVTVIVVIFTLSRQYFNLTLKWVERGSFGLMILFGIYWCYQVYRTV
                     NRARKPIIKSIRISQKKAGKLPLVTQKGHIHTENCSCRHKHLPTSNEMQQVRDWKAQL
                     MLVLSIGSRPCSGAILVLFLSYTLNLYAWGVISALAMAVGTGLTLSLFAYLVIIARNK
                     AVKVSQWYFSAQINRNIVWILKFTLGLALILFGMVLFHSSFIDAGTGVFFKR"
     gene            complement(46217..46855)
                     /locus_tag="PXF40_000303"
     CDS             complement(46217..46855)
                     /locus_tag="PXF40_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HDL5801682.1"
                     /translation="MKFIKTIITLIALYSMPVFSHPHSFVDLKTNVIVEGSMLKSFQM
                     EWMLDEIASSELIYEVKNSQDKEKTQQNITAEMVQTALQNHYFSTLYDSQNQPIKFTT
                     KPTATRFEIKNNRVIFYITFHLAKPHELKQSKVRFYTYEPSYYIAMEYNRPADVNTSN
                     ASCKATLVQPQVDSKLRLYASGLDKNQSLDMPENGDYSLGAQFAQKVEIICD"
     gene            complement(46916..47294)
                     /gene="rnpB"
                     /locus_tag="PXF40_000304"
     ncRNA           complement(46916..47294)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="PXF40_000304"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT        13717 a        10377 c         9001 g        14736 t
ORIGIN      
        1 atagtgcgga gttctgctac agatttgcag cgtccgatgt gtttatagcc atcaggacta
       61 ctcaagttat ttacaaattc gttaaactca gttcttgtgg cgtaaacaat attattgtta
      121 atcgataagg tgaccgcatc actactacta acttgtaaaa tcattcggta atattggact
      181 ttaccactgc cttgttctaa tacaggctta taattttcag ggcaatttgc tacagcaacc
      241 aaaccacctt gttcatcaaa taaccctatt tctcggacaa taaatccacc tacattttct
      301 gggattagta attcagcaat catctgatgg cgattttgcg ggtcttctag caaatctgta
      361 atttccgcac gataaacttc tcttacaagt gtggtttgag atgcacttgg agttattgat
      421 gacccgttac catctcctat agccatttcc ttaagtggca ctggtatctt atttgcaaga
      481 gcctcaacga tcactcgctc accgtgatgg gttaatattg ttttatattt ttgttccatt
      541 tttacctctt attaggataa atcgtaataa tttcgccact gtttgttgca ctaaataaat
      601 ccattttgct tttaatgaca ataacaggga gctttttagg tggataaatc gtaataattt
      661 cgccactgtg tgctccacta aaaatatttg ctttgccttt tgaggtggct gatactgcta
      721 attctgtgat gtgccttgat accggttttg catcttcaat caacctttct aattcttggt
      781 agattttttc gctaatccct ttatctttta actcaacaaa aaccctaaac gtcccgggct
      841 gccgttgccg tttttccgca aaccactcac ggatttcaaa agcatagccg agagattcca
      901 caattcttcg cactgcactt gctgtgcctt tctttcggtg ttcttcaaaa gatcgaataa
      961 tggtttctct ttttaattct tcactccaat gctcttccca ataatccacc gataaggccc
     1021 acgcaagata gggcaaaaat ttcacggggc atttgtgtgg attaatcaaa tttgcaaatt
     1081 taatcggatt ttgtaccgct tgttgcaaac attcggcagc tcgtttttcc aaaagtgatg
     1141 aaccgggtgg caataatgct ttaactgtat tcatcgctca cctcaacatt tagcgtgtaa
     1201 ttgacacaat aaccggcttg gtaaggtgtc agcaccaaat cagttctcgg ctgcaaaatt
     1261 tccacatttt gcacaccggc aacgtgcaag gcggcgtgga tacctgagtg agtcacatct
     1321 cgtccaatgc gttttgtttg gttgatgtaa gcctctaagt tagcttttgc cgcttttaaa
     1381 ataggctctt tctcaggtcc acggtagaga tgcaacaccg cattaatttc atattccaca
     1441 atgcttgccc cttgcacggt tactctatcg gcaatcggtc taacctcttc atcattgaga
     1501 gcaattttgg ccgcattgat gatttctgag gctacggctc cgttgccatc acgagaaagc
     1561 agcgttaccg ttacataagc tggctgtggt gatatgacgg acacatcggc aatttttccg
     1621 ttagcagaca gggcgtgaaa ggtgtaagcc ttccgtggac cggcaaccga aacactttca
     1681 atttttaact gcacacgctg acggaaatca tcatcaggct ctaactcttc gacgataggc
     1741 gggcttgcag ttaagtcttc agcttgcact acaagccgct caacattaaa gttggctgcg
     1801 atgacatcta aatccgtacc ggtagcataa gcaagcattg tggcttgagc cgcactatta
     1861 atgcgttggc gttcgagtag ctgcaaatag caattttctt gtagtaactt ggtgataggc
     1921 tcagactcca acgctaaccg tgcagccatt accgctcgtt cgctttctgg gtagagggat
     1981 aaaaacttgg ctttccgctc tgccagtaag gtttcatagt ccaattcttc cagtactttc
     2041 ggggcgggga gtttggataa atcgacaatt tcgctcatag tgtaaaacgc attcctttga
     2101 tgctgatttt tcggtgctta agggtaaaat ctaaggtgca aatcagctta ttgtagttat
     2161 cttcggcaaa ttccacttta aatcgggtga tcgctatacg tggctcccat tgctgcaacg
     2221 ccatcacgca cgcagcggag agttgcataa tcagacttgc ggcaatcggt ttatcagtta
     2281 gcttgtagag attactgcca taggttcgcc gcattacccg actgcctttt gccgtcagca
     2341 aaatatcttt gatagactgc ttgatatgct ctacttcgtc ttcaagctgt tcgcctgttt
     2401 ctcggttcat tatggttttg ctccgctagt tggtctgccg tcaccttgct caatgtgatg
     2461 gtggctgcct aaactgattc ccgcccctga tacatcgcct tttgctgtta ccgccccttg
     2521 tgtgctgatt gcaccttgcg atgaggttgt gcctttcacg gataggttgc ccccaatcac
     2581 gacatttttt gtggccttaa ccgtgggcgt gtcgagcgtg atagattctg tcgcctgcac
     2641 aatcaccact ttgcaatttt ttacggttaa ttgaccgctt gcggtgttgt agctgatttc
     2701 tgcaccgtcc gaaaagcgga atagatgctc atcggcggat tggctcgggg cgttttgggt
     2761 gtaaatccca aataagatca cgcctgtggt aaattcacca ctcacgctta acaccacgca
     2821 ttgctcgcca actgttggag ctgaccacgt ttgcgatgta ccggcacgaa aagtcagcca
     2881 cggtaagaaa tcggtcgtaa taccgcccga attgacccgt gcagtcgctg tggttaaatc
     2941 cacctcggca atagtgccaa gtcggataat attgtctaaa cggcggattt gttcggcgtg
     3001 gtttggctca ctcattttta caattacaag cggttaaaaa atgaggatat tttgcaaaag
     3061 gcgaaaggct ttgggtataa atgcgaggtg tgaaatgggt tttaacaggc aaagaaaaag
     3121 cgaccgatta ggtcgcttac tgattatggg cgtgggtaaa gtcggctact gtgaatgata
     3181 gctaagataa ttacttcatc tgcctgccta tcgtaatcgt acacaatacg ataacgtctg
     3241 acgaaagttt ctcttgtccc atcttctctt gctcttccag agagtggcat aaatgcaatt
     3301 tgctctattt tgtcaaaaat atcactttgt aatcgaatac cactcgtttc aaaaccggta
     3361 aattcgataa cactttttac aatctcgtca aattgactca atgcttgtgg tttaatggta
     3421 attttagcca taaaccactt cacgctgaaa ttcgtttagc tcttgtgatt tttgctcaat
     3481 ggtttttttg atatgtaagc gagattgctc tagcgtaaat cctaaaccag ctttgtgttc
     3541 ttctctacct tttcgcacac attcattcac aaattcatca tatccttttt ctttaaacat
     3601 catttgctcc tataaaaagc ggacaattta gagcattgtc cgcttttcat tctactttgt
     3661 caaattagcc cctgtctctc aaagacgatc ttgctcttgc ttgtgcttgg cgttgttgtt
     3721 tttccaactc cattgcaacc agtcgggcga ttgcttgtgg gtcttgccca ccggtggcgt
     3781 tgatggtgat atggatattt tgcgacaccg gtgcaactgt tgggcttggt tggcttgccg
     3841 tcagcggtgg tctgctgtcg attttgaccg caggcattgg ttgagcaaac gcaacacttg
     3901 acgcaagtgc agttagccca gcaactttgc cataatttaa ccggttaaga tttgccacac
     3961 ccaagcgtgc agttgcctct ttggtcatta catactcgcc cttatgcaca ataccggcag
     4021 gctcatattt gccaccattg ccggtgtagc cgcctgtggc aaaacctctt cctttaccgt
     4081 taccaaccaa gccaccaatc catttttgct caagttgtgg tggagtataa ttggggtcat
     4141 acatattgtt tgacatttct gccgttttag taatctgctt ggcgtgctcg gtgggaacaa
     4201 ttgcagtagc tgcctttttt acaccctcac caatagtgtc ccaactcggc atattttcag
     4261 aaatccactt aaactgatcg actagccact gaacaggtga tgttaccaag tctattgcac
     4321 cagccaatgc aagcccgaat ttttctcctg cagaactcgc tttatctaaa ctttccgatg
     4381 ttttatccgc tggggttaat aaatcggata accacttaaa cgtagattta acccagtttg
     4441 atatagtttc aaatagtttt cctaaaggtt taaatctctc taatactggt gcaagacctt
     4501 tagataatcc ttgcaaaaag cctccaaaaa aggctctgac cttctcccaa tttctatata
     4561 acgctacccc tgctaccgaa atagctgtaa tcgctaagcc aatcggcgag aaaataccaa
     4621 gtaataattt caacggtgag aaaataaaac ggattgcact ccacaacttg cctaaaatac
     4681 cttttagcat attgagccaa aatacttttg ttttaagctg tggaattagc attttgatgc
     4741 caccgcctaa tttattaaaa ctacttccca gcacatttgg taaagttgct aactgattaa
     4801 attttgattt aacaaaagca gccgtagtgc ctgatgaata aagtgattta ttgaataatc
     4861 ggaatttatc attactatca aataatgcct tatttaataa ggtgcttgca cctgtaaatt
     4921 tgccgatacc aagagccaat cttgctacag gatataatgc aaaacttgcc accactgcaa
     4981 aagctcctag caccgttaaa ctagagccaa gaatagcaga ccatttaacg aatgttgcaa
     5041 ttagcccttt attctcccgt gccaagctcg ctaaccattt aaccacttca ataatttttt
     5101 caccaaaagc ccataagcct tgtactgttt cttgaataac ggctccgaca tcttcagccc
     5161 atttttgcaa ctcgccattt tcagccattt tatctaaact gtctaacacc cattgcaatt
     5221 tatttttaat ccagtcaaat gctcccgatt ccatcacttg catttggaaa tttgtccaat
     5281 aatcttcaat ttttgcccaa ataccaacta gcgttttagc ttgtttttcc attgctccag
     5341 catatttttc gttaaaaata cgggttaggg tttgctcaat ttcttttcgg ttatttttgt
     5401 ttacttttgc gacttgttgt ttgcctaatt tatcagtgta ggcatactca ataatatttg
     5461 tacctttaac tacacttcct ttaataccaa attcttttaa gcgttcattc tcacccgtta
     5521 aagcatctgc tattgcctca actgcttgca ttacaggctt acccattgca gcacctgtat
     5581 cacctaatgt ttgtagtaag ccattggtag gatcaagacc gtatgctctt aactttacaa
     5641 aggcttccat tgcttcatca aggtttgagg gggtatctac tgcaaattgt ttaacccaat
     5701 caaaactttg cttggctttt tcagcacttc cctcggttac ctctaaaata gcattaaatt
     5761 gttcaaattt acccgctgtt tgagccattc cgacaacccc tttccctagc ccaacaacag
     5821 gggcagaaat tgccgcacca ctaatcattg agcgttgtcc taaattatgc aaacgttcgc
     5881 tggtattttt taccttttcg acagttgccc aatatttttc atttcgagct ttaaccgcat
     5941 ttagtttttc taattttgct ttttgttggt cgattaattg atttgctttt gcaatcttgt
     6001 ctgttaagtt ggtttcgctt tgagcaaaag ctttaatatt aatgccgctt gctctcaatt
     6061 cacgtcttaa actacgaaaa tataaaagtt gcttagcttg ttgatggcga gaatccttta
     6121 atgcccgatt ttcttctgtt ctttttcggc tgacacttga aatagatgca ccgagttttt
     6181 catattctct ttgcattttt tcaaaatctt tatctaaaaa tgcggctctt gcactccaag
     6241 ctgaaccacc tttcgtaatt tgttgaaatt cccttttttt cgcatccatt ttcactttca
     6301 gctcaattcg ttcatttttc atttggctga ttttattttt gagattatct aaatgctttg
     6361 tctgtttgag tatagtttca ttggatttct taatgctatc gtccattttt ttaaatgatt
     6421 gcattttact ttgtgttttt tccaatgctt ttaattcatc tctctgtact tttaaagatt
     6481 gagataattt ctccgtctgt tttaccacac tcttaaatgg tgcggttaat ttatctaacg
     6541 cagaaagaac tacttgaatt tttaaattat tgctcatatt ataaccttaa ttgtagtatg
     6601 gctaagggaa aatctatgga aatcttattt atcttacttg ggttaattgg tttcggtgca
     6661 ttattggcaa taggttttac aacctttgct gccatttttg gtgtagttac aacagtattt
     6721 ttaagcctgc tttcattatt ggcaaatatg gttgggctct ctattatcgt tattctgatc
     6781 tcactttatg tattgttacc actcaatact tttattttga tagcattgat tttttcagct
     6841 attttagggt ttctttgttg gtatcattca gatagacaaa gcgttaatca ataactcaag
     6901 cggtcaaaat tgaccgcttt tttgcaaaag tttctattca tcatttagct accagccaaa
     6961 atattaatca tataatcctc aatcatctgc agatcgtcat cagtaaaacc tagcaactca
     7021 cggctggcat atttcacttt taaatcccaa tctttccgca ctcgtccgat taagccttgt
     7081 tggtggattc gggcgatgac cgcatcacca ccctcataac ctaagctgac accttcgctt
     7141 tcaaggcgta gccgcataaa acgtggctgg gtaattttgt caaacatctt gcccgattta
     7201 attttgcttt ttaccccttt cttcggcttt ttgcgtggct cgtatgccga gccgtctggg
     7261 ttttgttgtg ctttaatccg tctgcgttgg cttcgggcaa gctctcgccc gatttgttga
     7321 tacatcaacc gtctgcgagg tttgctgata ttattcagta agctatcaaa ggcggttttt
     7381 acttgttcga tcggttcact catttggctc tgcccactga taaatcagct cgtctttgag
     7441 gtaaacctca tattcggtta aacgggtaaa tggcgaaaca tcggcaaggt tcggttcatc
     7501 ggcgtgggtt gcagttaggt gtccgtcttg ctctttcacg atcacccgct cggtaagcgg
     7561 gaggcggata taaatatcgt agctctcgtg attgttgtgg tcgatttcaa attcgatttt
     7621 gtcttgtagt tccgggtttt gcagtagctc ccattgttca tttcgcacaa aatttagcac
     7681 tggcacaaac aacacgtcgg ggtgatacgg aaaatccacc acgattagct ctaaatcgta
     7741 gtggtattca aacgaatggc tttggctccc tttgctttta attttgcctt tgtcatattg
     7801 caaaatcagc ttttcggggt tagcttggaa tatatcaatg gtttgtgtga gcacggctcg
     7861 caagcgatca ggtttaatca tctgcggtag cctttttgct tatgctcgta aatggtttgg
     7921 cactcaatgc aacgggtgca accaataacc atttctcggc gtttttcggg gattggctct
     7981 ccgcaatcct cacactcaaa aaggctggtg caagcggtct gattttgcag aatttttgca
     8041 agtgccgcct ctctggcttt ttcggctaat tcgttggctc ggtcgatttg gtctgacata
     8101 gtcgtcctta ttaaaaaagg cgatcactcg ccttggttga ttttgttgta ttgctcgatg
     8161 caatgctcga acgattcgat gatgacttgg catacctcaa tggtgttgag tcttttgtct
     8221 agtgctttga caagatcacc gttggtgtta atctcggttg ccggtgtttg gcactccagc
     8281 cttttcggac agattatcgg gttcgatttg agggtgtgat accgcacgct ttcgttggtt
     8341 gagcagcttg ccaacgctag gaggcacggc agaatcagcc cactttttat gcttttccag
     8401 ttcgttaagg atttcattac ttcgttgctc cgcttgtttc attttggcta acactttctg
     8461 attgaggtcg tccacctgtt tttgatacgc ctcaagctgt atttggctgt tttcaagctg
     8521 attggctaaa ttgcggttat cggcttgaat cagttggttt tgcgtggtgc gtgcctgtaa
     8581 gtctgctttc aggctttcgt tttggcgaaa ctgcacgaaa ttggctaata cgccaactag
     8641 caccagcaca atcattagcg ggctgaaatg cttattggtc atttggcaga gtttgacaat
     8701 catttaacct cctgcccgag acacagggct ttttcttttt ctcggcggat tttcaaacct
     8761 cttagcactt tacctcccga gcggttaaaa tcaggtatcc tattacacat cgctttaaaa
     8821 tccttagcca tagcatattt atggattgtt gtctgaatgt atttaccatt ttcatttgga
     8881 taaaatctaa ggttgtaaca tcccatatta aatgctgctg ataccatcgc cgaaaactga
     8941 ttttcgttca ttttgtcgcc attaaaataa cgattgatac acctttcagc tattttaaga
     9001 tcttttatcc aacgctcggc aatctcttta tcggtgtatt tgtgattgac attaattttc
     9061 tcaccgcttg cctcggttga gccaatgcca accgtgatta catcggcagg gcatttatac
     9121 ggatcacgtc tgcaaccctc cgcattgccg ataatggcta agcctgtttc gctggtgcgg
     9181 atttcggagc tgtaatattg ctttaccgtc ccgataatag ctgcaacgga gcagacaaat
     9241 acgccaactt ttacactttt actcattctt tttcccttgg ttttgtagct ttagctcaaa
     9301 ttctcgctct ttcagtttgt attctttggc tcggtatgcc caattaagta ataaggttaa
     9361 aatagctacc agaatactca ctaccacccc ccaatcagat agggtgaggc taccaaaaaa
     9421 gccaaaaatt gccccaaaat aggaggcttg ttcagttttg tgcatatttt ttaatcccaa
     9481 agttgcacgc tggatttcgc caccgttgca aaacggctct caatatccgg cattgtaact
     9541 acagtgccga tcggcaaacg tggcaaatga gccagttcgg ggttatattc taaggcttgc
     9601 tcgactaagc ctgccgtttg cccgtagtgc cgaaagatca gctcgtctaa ggtgtcgtct
     9661 tggcgtgcaa tcaaggtgtt catatcaatt cactaatcat tcggttttcg cccaaaatat
     9721 cacgcacggc aaagtggtaa tctcgtttca aatcaccggc ggtactttct agctcttcgg
     9781 ctttgtcgtg gccgtctttg gtgctgtcat aactgcggta gcgttcgtaa aggttcgcta
     9841 ctgcaaggca atagaccgct cgtttatatt tgtaaaccag cacgctttcg ccgttgattt
     9901 gctcatcatc acaggcttgc aagttcgctt tttgtgcttg ctctgcattg aggcgatagg
     9961 cttttaagtc ggcattgact gttgccattg cctcaatcac cgcttgtttt agccgctcat
    10021 taatgaccgt gccatcaatc cgcattgcat ttcgcacctc cagtagctca atgttcggaa
    10081 aaaagccatt attggtgata gtttcatcag attctgcggt gggcttgatc gcatttttgc
    10141 tggattcata gccattcact ttcgggatac taataacgtg attgcgttgt tccataaggt
    10201 ttccgtaagg taaggggtgg ggattttaaa agggtgcaaa atgaataaat caccctttaa
    10261 aatccgcccc ttggctggcg tggatacgct ctatttcggc tttcgcctac tcattctgtt
    10321 cttctgctgg tttcggctct tcggcttgtt tggcaagttg cttttctaac ttgtctcgca
    10381 agccttttgc accgcattga gggtcgaggg ctatcgctct ttgatagtgt tcaagggcgg
    10441 tttgtggctc tgcctcttgg attagctcgc ctagctcacg cagtaatttg gctcgcactg
    10501 ggtcgggcat atcaaattca gcggtgaggt cgtttgcctg tttcagcacg gctgcctcaa
    10561 acggctgttt ttggtctcgg gctttctttg ccgcctctgc aagctcttca accaaggcgg
    10621 ttgccggtgt gcgttcaaac tgctccggca ttgccaaatc gtgcattaaa acgtattgag
    10681 caatcgcaag ggcggttggg taatcgccaa tatcaatcga ccaaatcagc attgtggtga
    10741 taaccgtgtc ttgcacaccg gagcctttgg caagggagcc ttccacccaa ggtcggtatt
    10801 gctcaaaatt gttgcgttta aactcaatct ttcgctcaat cgactggatt ttctttaatt
    10861 ggcgttgatg ggctttaagt tgggctaaaa ctaagtcata gccttgtaag ccttcaaggt
    10921 tttctcggtt tggggttgca gactcacttt ctgcggtttt ccgcaaaaaa tgagcccgag
    10981 ccggactcat tcgcatagtt ccaccttact ctttatcttt gagtgtaatg ttttcgatta
    11041 atgccgcaca gccataatct tcgacaacgt agtcgatatt ttctgattcg taggtttcaa
    11101 tacggtcttt tttcggcacg ttctcaatat gcttgcgggt tgtcccctct tgcacataga
    11161 tggctaaatt ttccagctta gtgattaaaa tcgcattcgc cgggaagaac ggcacacgca
    11221 ccgcttttaa gcccccaatg cgtttttgtg agatcacaat atcagcggca agttcttcgg
    11281 ttggtgcgtt ttgctgattc acaatcggga aatatttatc cgcaagcaac ttgcgaccgg
    11341 taatcaccac taaatcggtg tcatcacgat gccattcatc aataagttct tcggtggcgt
    11401 ccattacgag tgcgtcaaga ttggcatact cttgaccttt gccgactaaa acttggttgt
    11461 ctgtgctttc gccattcatt acacgctctt tggcatcttc acgcattttc tgcaaccagc
    11521 cttttgccac atcttgcaat aacgggttgc tgttgcgatc actggttgcc gcacgacttg
    11581 tgccgttaaa gccgatcata attaagtcac gtttgcgttg ttttgccgca acattcgcca
    11641 ctttttgctg aaaatcaggg aatttcgccc acatatccaa ctgtttataa ttgatatggg
    11701 tgtcaaaatt gatttgttgg cagtggtagg tttgttttac caacttcgca atagaggtgg
    11761 ttttgcgttc accgtcaccg ctggtatcgg tggtgctggc cacggtgtga gctgaatcta
    11821 aacctaaggt ttcaccggtt tgctcatcaa caaacacaaa gctgatagat tttaagaaat
    11881 cagagctttc acgcaccttt tcatacagct tttgctgtac cgatggttgc actgtgaatt
    11941 taatgccggt tgccaatgca ttaaacggca agttgtttaa ttcagcttgg cgtgcaaggt
    12001 aggcgttata tttttcaagg gttaaatctt tcattcgtga tcctcaatta aaaatcggtt
    12061 tgtacatcac ctgctttcgc accagtggct tttgggcgtg gggtgtaatt ggcagacggt
    12121 tcttgttcca gttttgcaaa tttttcggca aattcgcccg cttgtttttg caattcggta
    12181 aattcgattt gcaatgtgct tagttcagtt tgcaagcggt cgttttctgt cgaaactttg
    12241 ctaaattgct cagctaacag ttccattgcc ttttcgtgtt cggcaaattt gccgtcattg
    12301 tcggttttgg ctttggtaaa catcgcctta aatttctcca gccacgcacc tttttcaggt
    12361 tcagcagtaa attctaaatt cgcctctact gcctcactca caaggttttc cggcttttgc
    12421 ttgcggtctg ctagtgggtt atgggttgca ccggcacaaa atgtgaggta ttccgtgccg
    12481 aggcttgccg gtgtatcagt caccgccaaa ccaactaaat acgcctcgcc tgtgtccgca
    12541 aaattaaggt caatttccac agaggtataa actttctgct tgtctttgac taacttcact
    12601 aaggcttcgg ttggggcgat ttctgccagt aactgtaatt tgccgtcttc acgttcttct
    12661 gttttaaccg ctaacacatc gccatagctg taagaatgcg ggtcatcttt ctcaaaccaa
    12721 cgccagcgga aatgctcaag gttaatacga gcaccatagt tatttttcgg gtcgtaattt
    12781 tcttcaatct gcgtgagcca ttcacgacta atttcgcgtc catctgtagt tgctccttcc
    12841 gttgctacca caaaccattt ggattttgtt gtcatctgtt tttccttgct ctaaagggga
    12901 ggggtaaaaa tcggatttat gatcttgttt tgtgccggcg gtttcaatgt gtggtacgtg
    12961 ttaaatcggg tttcacagcc tcaagcaaat gcttaaacaa ggtggatttt tgataatcgc
    13021 acctatggaa aatgaaaata caatcactga atacgaggtg ttggctgcca accctctaca
    13081 cgataaacga gaggctcaat caaagtattg ggcaggttac accgtgaccg aaatttctcg
    13141 tcagctaaat attcccgtct ctaccattgc aagttggaaa aagcgagaga aatgggacga
    13201 aatcagcccc gttggacgtg tggaagccac actggaatca cggctgaatt tgctgattat
    13261 gaaagagagc aaaaacaata acgactacaa agaaatggat gctttacgtc ggttgttgga
    13321 aagtacagca cgaatcaaaa aatattctaa cggcggaggt aatgaagccg acctcaaccc
    13381 aaatattaaa aaccgtaata aaggcgaccg caaaaagccc gagcaaaatg ccatttccga
    13441 agagcaagcc gaactgttga taaacggctt tttagacgga atgttccatt atcagaaaaa
    13501 atggcacgaa gctgggctga ctcatcgaat ccgcaatatt cttaaaagtc gtcaaattgg
    13561 agcgacttat tattttgctc acgaggcgtt agttgatgcg ttagtaaccg gtagaaatca
    13621 gatttttatt tccgcctcga aaaaacaggc attgcaattt agagcctata ttgtggcata
    13681 cgccaaacgg gttgccgatg tggagctaaa aggcgaaacc attaccttgc cgaacgagtc
    13741 tcaactaatt ttcttgggta caaactcgaa aacggcacag tcttaccacg gcaatctcta
    13801 ttttgatgaa atcttttggg taaaccgctt tgaggaaatc cgcaaagtgg cagcgggtat
    13861 ggcgagccaa aaacaatatc ggattactta tttttctacc ccttcgagca ttacccattc
    13921 cgcctatctg ctttggtcgg gcaagctgtt taaccgcaaa cgtccgaaag cggaacaggt
    13981 ggaaattgat atttctcacg ccaacttgaa aaacggcaaa aaatgcggag acggccaatg
    14041 gcgacaaatc gtgaatatct acgatgccga ggcaggtggc tgtaacctgt ttgatattga
    14101 gcaactcaaa ctggaaaact cgcccgatga gttcgagcag ctctttatgt gtgagtttat
    14161 tgatgataac cagtctgtgt tcaagttcac gatgatgcaa cgttgccttg tggactcgat
    14221 ggaggtgtgg cgagattatg tattcacgga cggctaccaa cgcccattcg gcaataaaga
    14281 ggtatgggtt gggtatgacc cgtcttacac cggcgaccgc tcggcgttgg tggtaatcgc
    14341 tccgccgaaa gtggacggcg ggaaattccg actattagag tatcgcactt ttaaaggggc
    14401 tgattttgcc gaacaagcgg cagaaattgt cgctatttgt gcaaaatata acgtgaccag
    14461 actggcgatt gataccacag ggcttggtgt cggtgtttat gaaatcgtca aaaaagaacg
    14521 accagatgcg gtggctctta cttacaacgt agagctgaaa tccaagatgg tactaaaagg
    14581 cttggatatt atcagcaaag gacgatttga atttgactca atgcacgctg ttgaggttgg
    14641 tgcgagtttt atggcaatta aaaaacagat caccaacagc ggacggcaag tgacttatgt
    14701 ggcagaccgt tcggaagagg caagccacgc cgaccttgcg tgggcttgct tgcaggtatt
    14761 tattaatgag ccgtttgatg ggaaactgga agaaacgacc ggcacagtag attttttaga
    14821 tgattaggac aaaaaatgaa aaaacaattg cgcaaaaatt taacccaaaa tgaccgctta
    14881 caaccgcaag cacaaaccga aattttcagt tttggtgacc cgattccggt gttagaccgt
    14941 gccgatattc tcaattattt ggagtgttcg gcgatgtatg agaaatggta taacccaccg
    15001 atgagctttg atggcttggc gaaatcgtta aggtcatcaa cacaccacga aagtgcgatc
    15061 atcaccaaag caaatatttt gctttccact tgcgaggttg atagccgtta tttatcacgc
    15121 cgtgatttgt catcgtttgt taaagattat ttagtatttg gcaacgccta ttttgaggtg
    15181 gtgcgaaatc gccttgggca ggtacagcga atcgaatcac ctttggcaaa atatgtgcga
    15241 aagggtttag aggctggtca attttactat gtgccacaac gattcgatca ccaagaacac
    15301 gaatttgcca aaggctcaat ctatcacttg cttgagcctg atattaatca agatatttac
    15361 ggcttgccac aatatctttc ggccctgcaa tctgcgtggt taaatgagag tgctactctg
    15421 tttcgccgta agtatttttt aaatggagct cacgccggct ttgtgtttta tatgagcgat
    15481 gcgtcacaaa aacaagaaga tgttgaaaat attcgccagc agctcaagca gtcaaaaggg
    15541 gtggggaatt ttaaaaactt gttcgtccac gcaccaaacg gcaagaaaga tggaatacag
    15601 attattccga ttgctgatgt gtcggcaaaa gatgagtttt ttaatatcaa gaacgtgagc
    15661 cgtgatgatg tgttagctgc tcaccgtgtg ccaccacaac tgatggggat tatcccaaat
    15721 aacaccggcg gttttggcaa cgtggctgat gctgccgagg tgttttttat caccgagatt
    15781 gagccattgc aagagcgatt gaaagagttt aatcagtggt taggtcaaga ggttatcaaa
    15841 tttaaaccgt ctaaattgtt acagcggaca caataaaaca gatctttaca aactgacaat
    15901 acagctccta gattggggct tttttaatat ataaagcaaa agttttgcct gattagatta
    15961 tatatttcgg caatttatta tatcaaaaca acaaataaaa tacacttaaa aaataatttt
    16021 tcctttattt ttcaacgact tcaccacctc caaccccgcg cggtctatcc ctcacctcgc
    16081 ccgcacactt aatttgtcga tttatacgca aatgcaaaaa ggcgatccct acaagcccca
    16141 tataatcgca aagcgatctt aaaaactcga tctttttacg caattttacg cacctcaacg
    16201 caaaaatatt gcttgtcagg aaaaatcgtt attctttaat tgcatataca tatactgcac
    16261 attatagatt ttaacttatt gataaataat gattattggt gcgagctagt cgcaccatta
    16321 tttttaagcc tgaatatccc gattcaggct ttaatcttac catacttata atcaataatt
    16381 taaatcatct ctcaaaaagc aatatagcat taataaaaac atcatttttc ataggaaact
    16441 tgatatttat taatcgtttg tagtctctaa taatatttat ttacacaaaa taaactgcaa
    16501 agagcaagaa aatctgcctt actgtgctta gttcctgttt gtaggaaatt gattttatgg
    16561 gaaaacgcga ctatattcaa tttattgttc gcagcaaaag agccaaattc cgttcagaat
    16621 ttggctctat atttaaaata taacttagca attaaccttt gtagttatat acgtgagcaa
    16681 ctaagtctaa tactttgttt gagtagccaa cttcgttatc gtaccaagat actaatttaa
    16741 cgaaagtatc agttaatgcg atacctgctg ctgcatcaaa tactgaagtt tcagttgcac
    16801 cattgaagtc tgttgaaaca actgcatctt ctgtgtagcc taatacgcct ttcatttcgt
    16861 tttctgaagc acgtttgatt tcagcacaga tttctgcata agttgctggt ttttctaagt
    16921 ttacagttaa atcaacaaca gaaacgttag tggttggaac acggaaagcc ataccggtta
    16981 atttaccgtt taatgcaggt aataccttac ctactgcttt cgctgcacct gttgatgaag
    17041 gaatgatgtt ttgtgacgcg ccacgaccac cacgccagtc tttcgctgat ggaccatcta
    17101 ctgttttttg cgttgcagta gttgcgtgaa cagttgtcat taaaccttct ttgataccga
    17161 atttttcgtg aataactttc gctaatggtg ctaaacagtt agttgtacaa gaagcgttag
    17221 acacgatgtc ttgacctgcg taagtatcaa agtttacgcc gtttacgaac ataggtgttg
    17281 catctttaga cggaccggtt aaaacaactt tcttcgcacc tgcggtgatg tgtttgcgag
    17341 cagtttcatc atctaagaat aaacctgttg cttcaactgc gatatcaaca ccgatctcat
    17401 tccattttaa gttagccggg tcacgctcag ctgttacgcg gatcgcttta ccgttaacta
    17461 ctaattgacc gtctttaact tcaacagtac cgtcaaaacg accgtgagtt gaatcatatt
    17521 tcagcatata agccatataa tcaacatcga ttaagtcgtt gatacctacc acttcgatgt
    17581 catcacggtg ttgtgctgca cggaaaacga tacgaccgat acggccaaag ccgttaatac
    17641 caattttaat tgccatagat ttttctacct atattaaagt taaacaaaat ttgttcttta
    17701 tgtactacac taaagatgct tgaattatag cacatctttt cactttcctg acaagccaaa
    17761 agaacccttc caatataaca gataaatttt ttgtgatcta tgtcaaattt tgaaatttat
    17821 aacgattttc aggtcaaaaa aagctacaat gacttcgcta ctatcttagg agaattgctg
    17881 atgattaaac ctattcacgc cctgacagaa caacaagttg atattttaat caaccacggt
    17941 acggaacgtc cgtttaccgg aaaatttttg aatgaacatc gggtaggaat ttatcgttgt
    18001 gccagatgcc ataacgattt atttcactca gatactaaat ttgatgccgg ttgtggctgg
    18061 ccaagttttt accaaacgat ttcagaatcg tcactacgtt acttagatga ttacagttta
    18121 ggacgtcatc gtatcgaaat tcgttgtggg aattgtgatt cgcatatggg acacgttttt
    18181 ccggacggcc caccaccaac agggttgcgt ttttgcctca actctgcggc attgaatttt
    18241 aagtgggaag aaacaggcga agagattgac ggctaacgag taataaacaa gcggtcatta
    18301 ttagcggaaa atttgcaaaa atttggcgaa taatgaccgc ttgtgctatt taacttctag
    18361 ccttaagcga gaatattttt cgcaataata tcgcccattt ctgaggtaga aagcggtttg
    18421 ctgtcatcag ctaaatcagc ggtacggtag ccatcagcaa gggctttttg gatcgctgtt
    18481 tcaatcgcat cagcagcatc acctaagtta aagctataac gcaacatcat tgcggctgat
    18541 aaaatttgcg caatcggatt cgcaatattt ttaccggcaa tatccggtgc tgaaccgcct
    18601 gccggttcat ataagccgaa accttgctca ttgaggctgg ctgaaggcaa catgcccata
    18661 gaacctgtaa tcattgcagc ctcatcggaa ataatatcgc cgaagatgtt tgagcataat
    18721 aaaatatcga acgattcagg tgctttgatt agctgcattg tcgcattatc aatatacata
    18781 tgctcaagcg tgacttctgg gaactcttta gctacttccg tgacggtttc acgccataaa
    18841 atcgagcttt gtaacacatt ggctttatcc acagaggtta cgtgtttttt acgtttcatt
    18901 gcagattcaa acgccacacg ggtaatacgc tcgatttcat atttgtagta tacttcggtg
    18961 tcaaacgctc tcgtttgcgc accttcacca tcacggcctt tcggctgtcc aaaataaatc
    19021 ccgccggtta attcacgcac caccaccata tcaaaacctt tagcagcaat atcggcacgt
    19081 aatgggcaga atttttccag cccttgatac aatgcagcag ggcgtaaatt acagaatagc
    19141 gagaaatgtt tacgcagtgg taatagcgaa cctcgttcag gttgctcatc aggtagtaaa
    19201 tgcgtccatt tcgggccacc taccgagcca aacaaaatcg catctgcctc ttcacagcct
    19261 tttaaggtat tttcgggtaa cgctttacct tgagcatcaa tcgctgctcc accaatgtta
    19321 tattgattaa aatttagttt aaagccaaat ttttgttgag tcgcttcaag cactttgata
    19381 gcttctgcca tcacttccgg cccaatgccg tcaccggcaa gcactgcaat gttgtaagtt
    19441 tgcatataag atcctcttag tatatttaat gtcgattcgg ctacattctg cctgaaaata
    19501 gctgttttta aaacgaattt tacgccaacc cgataaaaat agcgtaaaat aaaagcgtat
    19561 ttggagattt tttgatgaaa ttgaccgctt gtaaactcgt ttttctactc tatttgatgt
    19621 ttaacctcac cgcttgtggc acagtactaa gcttggttga acaggattac cgtgtttatg
    19681 ccggcgtaat aaaagatttc caagtaatgc aagaaggcgg tatattcgcg gtgcttgcgg
    19741 tgatcgattt acccttgagt ttcgtattag atactttaat gttacccgtt acacttagcc
    19801 aataataacc acattaaaac gcctcttttt ccgctatttc agccaccaca aacggcgtat
    19861 tttccgtttt atttttaagc aaattttgtt ctctaaagtt aatcggaaaa tggcaggcaa
    19921 actcgtgctg ttttactttc actaatggcg gtttgttgat acattttttt tgtgcaaaag
    19981 ggcaacgagg gcctaaacga caaccaatcg gcatttcttg taacatcggg actgagcctc
    20041 gtagcgtatt taagctactt ttaaaggcta aaggctgaga aaagtccggc gaactattga
    20101 gtaacactcg agtatagggg tggtaagacg attcaagaat gctctcttta tccgcaattt
    20161 caacggtttg tccacaataa agcacattgt aagaatcaac ccaattttga atgctacgca
    20221 tgtcattact caccagcaag attgaggttc ccaaattctg attcatactg gaaagcaagc
    20281 gataaacctg caactgcgtg gttgattcca taatattagt cggctcatct gccaccaata
    20341 atcggggctg atttgccacc gccattgcaa tcatcacttt ctgagcttcg ccttcggtaa
    20401 tatcgcttgg gtaacttttc ataatatctt gatgatcacg aataccaaca cggtgtagta
    20461 gctcgattgc ttttttcttt ttccacccaa atcgttgcca ccacttccct ctaaattgaa
    20521 tggtttgcat cagttgttta ccaatttgct ggcttgggtc aaggctagta agcggatctt
    20581 ggaataccat tgaaatatga tcgcctacca attttcggcg ttccgctggc gaaagtttca
    20641 gtaattcaat atcgtcaaag cgaaagcgat ctgcactcac aatccattca tctttaatca
    20701 taccgcaaat cactttggct atgaggcttt ttcccgaacc agattctccc accaagccac
    20761 aaatttcgcc ctcatcaaca gtcaggttga tgttatccac catttttact ctgccttttg
    20821 gcatatcaat ttcaatactt aaatggcgaa tatcaagtaa tgccatacta ttccttaatc
    20881 tgtaaaattt tacttaaaaa tgaccgcttg ttatgtgtca gtatcctatt taaatactat
    20941 tctttacggt atttttcaaa aatcacgctt aagcgtgtac caagtattgt aacggtaaaa
    21001 atactaaaaa taattgctaa gccaggtaat atcaccgtcc aaggagctat ataaatcagt
    21061 tccatggatt cacgaatcat cgctccccat tcaggggtcg ggcttttagc ccccagcata
    21121 ataaaactta acgcactaat atctaatatg gcgatcacaa aaatatgtga aagtgcttta
    21181 attgccacgc cggtaagatt aggaataatc acttctcgaa ttaaatacca gcagcttgca
    21241 ccgtctagct ttaaggtaat gatgtactct tttttgagtt gtttttcggt tgcttgataa
    21301 attttatgga taaaatgcgg caacatcgct aagaaaatcg ccaacattgc attgaccaaa
    21361 ctcgcttcca ttaaggttgc aatgatgatc gcaatcaata aaatcggcat aaataaaaag
    21421 gtatcgaaca aatggctaat caaccaaaat gaacgtcctt ttttcagccc ggcataaatc
    21481 ccgatcatac cgccgataat cgcaattaat aaggtaatca tcagtgcgga accaagcgtg
    21541 tagtaaaaac catacataat acggcttaaa atatcccgtc ctaaatcgtc agtgcctaaa
    21601 aaatggctga tttgaccttt gtcgtcccaa gagggaggca ttaattctaa accaacaaat
    21661 tgttcattat aattgtaagg agcaagcaaa ctaccaacaa aaatgagagc cagtaatagc
    21721 aaaaaaagat aaaaactgcc aagtgcaagt ttatcttgtc ggaaatgaaa ccaaaatgcc
    21781 ttaaatgcgt tggtttctct aaattgctcg ggttctttaa taactgccat accaatcctt
    21841 tttatctgat gggtctaaca tcacccgcac aaagcctgta accatatcta ctaataacac
    21901 aaacaccccg attgcaacta ctcccgctga aatcgcatta tagtcttgaa tagcaagggc
    21961 atttatcagc caacgtccaa ttcctcccca gctaaatatg ttctcaatta acataccgaa
    22021 ggcaaaaatt aaaataaagg tacgggcaat cataggtaat aatgcaggta aagtattaca
    22081 aataatatgc gttctccaaa ctctaaacgg tgtccagcca cgcgttttcg ctattttaat
    22141 gtaattttgt ttcattacat aacctgctct agcttgagta atatgcataa cttctaatgt
    22201 agctggcaca gccaagacta atgtcggcaa agctaagtga tgtaaagcac tctgcatcat
    22261 ttttaattta taaggtacat cagataacca aatatctaat agcaaaaagc cggttaccat
    22321 ctgtttcgga taaagcgaat ggatttctcc aattgctgac acttcccact gattgagaga
    22381 agcgtaatac attagcacta atgccagcca aaataccggc acggctaaac tcaatgaacc
    22441 tagtgtattt aataatcgcc caaccatatt tttttgctga gtagccgcaa aaaaaccaag
    22501 aggcaaacca ataattaaag aaacaatgag agccgataaa caaagcgtaa ttgtagccgg
    22561 gaacacctgt aaaatttgcg ctgtgagcgg ttctccatta ctgaaactaa taccaaaatc
    22621 accatttagc agagatttta cataataaca ataagcctca aaccagccta actcggctaa
    22681 gtggtttaat ggatctcgta acagaatatt aaaactgata agtgacaaaa aaatcaacgt
    22741 aatcaaggtt agaaaaattt ttcgaaaaaa gacaatcagc ataattagtt tcctttttta
    22801 tgccccaagc ccaaacgtaa ctctgataat tttacctggc cgaaagggga aatatctgcc
    22861 tgtttcactc catcttttat gactaataca cgattagcat tcattaaagg gagaataggc
    22921 aattgctctt ctaataattt ttgtgcaaat tcatacaata aattagctga tgccggatca
    22981 tcacttagac gggctgtttg taaccaaaaa tcaaaatctt cattgcacca atttgataaa
    23041 ttagtcaccg tttccgcagc tttacaactg agtaaggcct ccaaaaaact gttaggatca
    23101 agattatttg ctaaccaacc acctaaaatc aaatcataat ccgcactttt attagcaagc
    23161 tgttgcacca aataagctcg acttactgcg cgaatttcga cctctaaatt ttgcgtagct
    23221 aaatcagcac gtatcatttc tgccattttt aatgggtgtt gattataaac tcgtttttca
    23281 tcaattaccc acagttttaa gcgctgtttt tggtttactt cttcggtctc tgttttgcta
    23341 tctaaagacc gatttataat actgtcatgc atttcaaccg cttgctcacc tgaattttgg
    23401 tgtggttgat aagggtagct tccattattt tttttcgacc acaaagctgt tggtaatagg
    23461 ttatccgcta cttcacctgt accataaaat aatttctctg caatacgttt gcgatttatg
    23521 ccgcgtgcaa tacgttggcg taatgccaaa tcctgcccaa taccccgttg catattgaat
    23581 gctaaataaa ccaaattagc acctttacta ctaataagct gccgattatt taacactgat
    23641 aattggctag gttccggaaa agcaaccaca tcacattcat tatttaaaaa ttttgccatc
    23701 ctgccggtcg cttctgtgga aaaatctacg accatatttt gaatatatgc ttttttgccc
    23761 cagtaattca tatttggttt taaacgcaca taatcattat tttcataact ttcaagttga
    23821 tatacgcctg ttcctaccgg taataaatcc agttgaacta agttatcatc tgcattgagc
    23881 tgtaaagcat attctttaga cagaataact gcatattggc tggctaaatg cgccaacaat
    23941 gctgaatcag gacggactaa ttcaattttt acaatgtcat ttgacggaga atgaatgctg
    24001 gcaattttat tcgctaaatc aacactttca aaataaggaa aataaatctg ccccgctgtt
    24061 ttttggtaaa tatagctttg tcgctggtgg tgtaatacac tttcaggctc acttttcact
    24121 tcaggtaaat cactttcttt accaatcatt cgttttagcg aaaacaccac atcttctgcg
    24181 tttaatttac gactcggagt aaaccatgga gttgtatgaa aagcgacatt ttttcttaaa
    24241 cgtaatgtaa tcactaaacc atcgtcgctg attgaataac tttcagctaa agcaggctct
    24301 agtcgatttt ttttcggatt aaactcaact aatttatcgt agatctgctc tgttaccaca
    24361 ttcatattcg aactcacatc ggatttttgt gggttaaaag agaatcccga tgaagtagtg
    24421 caatacacaa ggctattttc aagtagctct tgaggaatac ttggcgctgc gtaagcggtc
    24481 gaatttagcc ctaaatttgc aaaacatact gaaaaaatga ccgctagttt attcatcttt
    24541 actgtttcca ttttttgtta acccatattg acgcaatttg tttgccaccg cagtatgtga
    24601 aagtccgagc cgttgtgcta attttcgggt actcggatat tctgcataaa attggtgcaa
    24661 taattgggct tcatactggc tcatcatttc ctcaagtgtc gcctcctcac gtacttcaat
    24721 catcgcctcc atatctctgg gtaaatgaag atcttttacc gctaaacggt agctatgcga
    24781 aagtgtacaa gctcgataaa gtgcgttata aagctctctt aagttgcctc gccagtgata
    24841 attctgcaat gcttgcaaaa aaacattatc atactctaat ttgctcaccc ccaactgatt
    24901 gctaatttgg gcgataaagt aatcagctaa taatggaata tcctcttttc gatctcgcaa
    24961 aggtggtaaa tttaaagtga gaacatttaa acgatgaaac agatcttctc ttactttgcc
    25021 tttttcaact aataatgaca aaggctgtaa tgaagtacag atcaccctaa cattgacttg
    25081 aatctcttga tcttcgccca ctcgacgaaa agagccatca tttaaaaagc gcaataattt
    25141 ggcttgcatt tccagcgata actcagaaat agagtctaat aatactgtac caccgtgagc
    25201 atattcaaag aaaccgacgg actcaacgcc attgccacga tgtccgaaca tttccgattc
    25261 tgcttcttca gccggtaaac cggcacagtt cacggcaata aatttttgca ttcgacgaga
    25321 tccaaaatgg tgacaagatt tggcaaataa atcttttcct gttcccgtct caccttgaat
    25381 caataatggt gcatcaaggt tggcaaattt ttttgcttgt tcaacaacct cttttatctt
    25441 tacagattgt ccaattatct gttcaaaaga ttctggattt acgaccatat agtctcctat
    25501 aaatagcaaa tttgtgcatt gtttaatacg cttaaagcct gatattagct actagagtta
    25561 acaatgcgag agggattgtg aggcgatcat accgctattt ttctcttttg gaaacttttg
    25621 tttacaaccc tattcagatt atttaagtta ttaggtttac aatacagcat agatcttcta
    25681 aacttattgc actttttatg cctcaagcgg tcataaaaaa cgaatttttt actcgctacc
    25741 cccattggta aagccgatgt ttaaaggtaa gcgttttgca aacaaaggag caaatgatgt
    25801 atttagaaca aattaaagct gagcttcaag aagctgcaga tgtattagac aaatttatgt
    25861 ctgatgaaaa aaatattaaa ttaattcaag atgccgccat gctgattgca aatagtttca
    25921 agcaaggtgg taaggtgatt tcttgcggta atggcggttc gcactgtgat gcgatgcact
    25981 ttgccgaaga attaacaggt cgttaccgtg aaaaccgtcc cggatacccg gcaatcgcta
    26041 tttccgatgt cagccattta agctgtgtaa gtaatgactt cggttatgaa tatgtcttct
    26101 ctcgttatct agaggccgtt gggcaaaaag gcgatgtact ctttggtcta tcaacctctg
    26161 gtaactctaa aaatgtgtta aatgcgatca aagttgccaa agaaaaaggc atgaaagtaa
    26221 ttgcaatgac cggcaaagat ggcgggcaaa tggcaggatt agccgatgtg gaaatccgag
    26281 tacctcattt ccgttacgca gaccgcatcc aagaaattca cattaaagtg attcatattt
    26341 tgatgatgtt aattgaattt gagatggaaa aagcctaatc tctataacaa aaaggcgttt
    26401 gcaccaaacg cctttttctc atacttcatc aataacaaac tcaaaccaat caatcacatc
    26461 tttttcgtga ataccgttag caatcagcat tccggcattt tttacagaat caggatcttt
    26521 agagattaaa gggtgccaat caaaaagagg ctttccttca taaagtaaac gataagcaca
    26581 ggtttttggc aaccagccaa aatcaggtaa gttcttttta gttaattttg tacaatccga
    26641 ctcaatttta aaacggttcg agtaattcat acaacggcct gtattcacat ctaataaatt
    26701 acaggcaacc gaggtatagt aaagccgttc acgccgccct cttccctgaa tatatttccg
    26761 gtagcagcac ttaccacaac cgtcacataa tgcttcccat tcagcatcat tcatttcaag
    26821 tagcgatttg ttctgccaga aatttgcttc aaagtgttgt tcaaactgca taaattaacg
    26881 tattacaacc gcagtaccag tcgctaccac gatgaacatt cctttatcgc cgcccattga
    26941 ttgatactcc atagaaacgc caaccaccgc atttgccccc actttttgtg cctccttagc
    27001 taattcagct aatgcctctt ttcttgcacc gtttaatttg ctttcataag cacctgaacg
    27061 tccgccaata atatcggtga taccggctaa gaaatcacgg ataaaattag ccccagaaac
    27121 tacttcgcca aatactaacc ctttgtattc tacaatttgt ttaccctcta tcgtaggtgt
    27181 agttgtaata atcatttatt ctctcctgct aattgctgtt ttaattgctc tagtgcgatt
    27241 gcacggtgtg aaatcgcttt tttctctttg gtttctaatt cggcaaaagt gcaagctttc
    27301 ggtgggtaga aaaacaggga atcgtagccg aaaccatttt cacctctttc ttccgtcaaa
    27361 atttcaccga aacattcacc cgacgcaata taaggtgttg ggtcagtttc gtgttttaaa
    27421 aacacgatac aactgacaaa tttcgccaga cgattctctt gcccttgcat tttggctagt
    27481 aatttttggc gattatcggc atcggttgcc tgctctccgg cataacgtgc agaatatagc
    27541 cccggttcac caccaagtgc cataaccgat aaacctgaat catcggcaat cgccggtaaa
    27601 cctgtcattt tagcagcaaa tcgtgcttta atcagcgcat tttcaacaaa agtcaaaccg
    27661 gtttcttccg gtgattcaat cccaaattca ctttgagcca ccacctcaaa accaaattgt
    27721 gagagtacat ctgccatttc tttaacttta tctgcattac ttgttgcaag tacaattttt
    27781 gtcttttcca tattgtcctt atttgcaaaa atattctaaa aaatcaccgc ttgttattcg
    27841 ataccttttt ggtaagacat catcagcaac gttcgccatt tatcctcacc tttctcatct
    27901 tttcccatat tagcaatatt cggaaatctt ccccattgtt caaagccgtg ttttctcatt
    27961 agattttggc tcactgtatt taattcaaac acatacgcca tcaacgtatg aatattgtga
    28021 ttaagcattt cagcttgcat aaactcaata atttttgagc catagccttt tcctttggaa
    28081 tagcggtcta aatagatact gatttccgaa gtatgtaaaa atgccggtct ttcataaaat
    28141 ggtgaaaaac taaaccagcc agcaatgcct ttttcatctt cgaccaccca aataggatat
    28201 tgggctgttt caaggtgaaa atcgaaccac ttccgccgat tttgcgtagt tgccagttct
    28261 aaatcggcgg taatttggtg agtgggaatt gcttgattat aaattgccaa tattgtctca
    28321 aaatccgctt ctactgcttt tcggaattgc atttgttatc cttttattcg ttgccaataa
    28381 tacgcaaaaa attaatattt tattaccgct tgctaatcat actcggcaat aaaacctgta
    28441 cttttactcc gccactttcc acattttcaa tcgaaaattc ggctttgagt tcagccgccc
    28501 gttcttgcat aatcgtcagt ccataatgcc cttctggttg cgtatgggca gcaagcccta
    28561 cgccattatc ttgaatagtc aaacaatgtt caccatcatc atttgtttca gcaatcacat
    28621 taatttcagt ggcttgcgaa tgcttaatag cattaatcac agcttctcgt acaatttgca
    28681 atacgtgaac ttgctgctga gcattaaaca tatgcgaagg taatttgcaa cttaagcgaa
    28741 tctgtgctga ggttttcggt cttaagcttt ctaaaatttt ttctaacgct tgttgtaaat
    28801 tcgcttcttg aatcgttagc ctaaacgtcg tcaacagctc ccttaattgg ctgtaagcat
    28861 catttaacgc tttttcaaat acagttaaaa tttcattacg cttttcatct gttttagcaa
    28921 gcttaagcag gctaacctga attttgaaaa acgtaagaga ttgggctaag gaatcgtgta
    28981 actcacgagc aataattgca cgctcctcca tgagtaccaa ttgttgctgt tgcttttgca
    29041 tctgcactac ataaaggcta cgaccaatca tttccgacac attttggatc aatcgttcac
    29101 caggacaaac cagtgagggt ttccagctta agatacccaa tttttcattt tctattgcaa
    29161 tttcagcaga aacccaatct aaacttggtt tattgtctat tgatacattc caatattcag
    29221 ccccatatac ttgtaaatca atccctagca aatgttcatt atcaaatacc gttttaagta
    29281 cttgatttaa cacttcttta ttaatcggct tagcagttaa taattgagag cattgatata
    29341 ataccagtaa agaacgattt accgccaata aacgacgtgt tttatcctga actttatctt
    29401 ctaatgaagt atataatttt aataattcat tagacatctc agtaaaagta gaggaaagta
    29461 gccctaattc attgggttca ttaaccgcta attttacgtg gtcaaaatct ttattttgaa
    29521 tttgccaact cgcttttacc aattgcctta aaggtccaat aatctttttt cgagtatacc
    29581 aaacgccaat ataagcaagg gcaataatca gtaacattgc aatcgcaatc acgcctgttg
    29641 caatctttaa ttttaactca gcgaactctt gtaagcggaa aacaaaatca tcaactctct
    29701 gcacataatc ttcaatgtgc gaagcataat taactttatc tccctgagcg acataagatt
    29761 gcatttcata ccaatcttta agtaattgtt gatagctttc tatcacgcta tctggcaata
    29821 aaacactttg ctttaatgaa ctaagctctg tagcatgtag cgttcgatga tattccaaca
    29881 atcgctcagg tagcagcgct ttttttgaat ccatttctga taacaatcga taactttgca
    29941 tacgaagtga gcctgaaaca ttaatcaggc tcgcatcaga tttattgctc cacataatac
    30001 caagtgagat tccactgata atcgaagcaa atccgatcat aattaaaaaa tagagtccta
    30061 tccgcctagc aatagagtat tttgctttta tcataattaa agattaaatt gagctttcaa
    30121 ttcattagca atactatctt cattatttga acctatagtt ttcttcgctt tttgctgaat
    30181 atctggttct gaatttccca ttgcaatgcc taatccaacg gtttctagca tagaaacatc
    30241 attgaaatta tcgccaaagg caatcacctt ttgtaaatca ataccttctg tttttaatac
    30301 ttccgctaat cttgcccctt tgctgttacc aacactggta atatcaaccc tatcaaccca
    30361 agaccattcc gggcttactt gatcaggcgg taatttttca acaaattttt gcattttggc
    30421 aagatctgga tcgctaataa gcactttcca tacggttaca cctttatcaa tttcttgttg
    30481 gaaattttct acctgataaa cattcggacg aacttctggt gcgcaagact caacccattt
    30541 ttggaattta gtgaagtgaa tattcaaaga ctcataagtc attgcatctt caaaataaac
    30601 cgcagtatga atcccttgag cttgtgcatc attaactaat tttgaagcaa tttctgctga
    30661 taacggatta ccgcttaata ctttttcatt tttaaaatca tacacataag tgccattgca
    30721 acacacaact ggcgtatcca gccctagttc tacataataa gggcgaaccg cagtatggtg
    30781 cctaccggta acaaagtaga ctttaattcc cttttctctt acctttttaa tagcctcttt
    30841 actggattct aaaattgttg cgttcgatga aagtagtgtt ccgtctaaat caaatgcaat
    30901 agcttggtag ttcatagtat tcccctataa ataaatagat aaaagaaaag gcaaccattt
    30961 ggttgcctta atattctact ctaagttagt caaaactaga aattatttac tgccatcata
    31021 tgctggggtt tgataaagtg gagccggacc attaggacct gcaacattgc caccttcatt
    31081 ttgtttcatt acaccacaat ttgcagaaat ttcaacacga cggttagggc gtaaacaatc
    31141 ttttaatgct tgaccagttt caccatcaca agcttttact tgattcgctt taccataacc
    31201 taccgcttca atttgtgctg taacgccttg ttgtactaaa cgagctttaa ctgtattaga
    31261 acgacgctgt gataagtcta agttataagc agcagagcct aaacggtctg tatagcctgc
    31321 tactttaact tgttgtgctt tagatgcttt taattgttga gcaacattat caacaacttc
    31381 tttacctttt gtagttaaag tcgctttatc gaaatcgaat aagaaatcgc cagttaaagc
    31441 aaatgatgag tttccattac atccatttgg ataccagaag aaactttgtg cattcatatt
    31501 tttatcgaat aaaattttaa attggcaaat tttatgtacg ccattttcac ggtaattgaa
    31561 tgcatagtcc cattcacgaa caccatataa gccttcttca aaatgaggac gaccaattag
    31621 attatataat tgatctttgt tcatcccttt ttcaatttga cgaacgtttt cccagtttgg
    31681 ccatgaacca aattgtgaac catcgtggtt aaattcagat tctgagattt tcgggaatac
    31741 cgggttttca gttgttcctt catcactcac tttacttaag ttaccacaag cagccactgc
    31801 taatgccact gtcgataata aaaatccacg gaaaagggct tttttttcca ttttcatatt
    31861 aagtttcctt atagtaatct gtataaaaaa atagcttcac aacctattaa agttgcattc
    31921 ggacggattc tacaatacaa atataattaa ttctattaaa tttacataaa ataacatttc
    31981 aaatatattt aagatactcc acttttaatt gcaaagattt ctctcctcga aattcattaa
    32041 tatccaacct ataaactaat cttgcctttt tgatcgataa gtcaggaaac gcccttacat
    32101 ccacattaaa ccaaattgca tcaaatagtt gccctttctc tgattgcaac attaatttta
    32161 aatgtttacc tgcgagtaat ttttgttgga gaatgctaaa ctccccttca aaactaggtt
    32221 ctggaaaatg ttgtccccaa ggcccacctt gcctaatcat ctcggcattg gctaaagtaa
    32281 actctagtgc atttaactca ccatcggtat aaatgatgcc ttgtaattgc tcaggctcga
    32341 taattgcatt aatagattgg tcaaatatct gtttaaataa atctaatttt gattgatgga
    32401 tagtcaaacc agccgccatt gcgtgtccac caaatttttc aatcaagtct ggatgtcgca
    32461 tatcgatatg ttccagtaaa tctcgcatat gtactccgtt gatcgagcga gcagaacctt
    32521 ttagatattc actttcctca ctttcttgtg caaaagcaat gacaggacgg ttaaattgat
    32581 ctttaatgcg agaagctaag atcccaatta caccttggtg ccaatctgct tgatataaca
    32641 ctattccgtg tgcctgttca gactgcgcaa gacttggcaa attcgcacaa atcgacagtg
    32701 cttctgcttt catttcttgt tcaaactctt ttcgggtttg attaagagaa tcaagatcaa
    32761 gcgcaagccg gcgagctaat tccatatttt cacaaattag taactcaacc cctaaagaca
    32821 tattttctaa ccgaccagct gcattcaaac gtggtgcgat agcaaaaccc aaatctgctg
    32881 cttgcaaagt agaaagatct cgcttgccca cctccgctaa agcttttatc cctaaacggc
    32941 aatgccctga acggattcgc tgtaaccctt gatgcaccaa tatccgatta ttttgatcta
    33001 acggcactac atcagccact gtgcctaaag cgactaaatc cagtaattca gcaaaatttg
    33061 gctctggttt attttcaaat aaatgttgtt ctctcatacg agaacgcaat gccatcatta
    33121 catagaagat cacgcctacc ccggctaaag atttagacgg aaattcacaa aaagctaaat
    33181 tggggtttac cagtgcatct gcattgggta ggctctctgg cggtaaatga tgatcggtaa
    33241 ccaaaacttg aatctgatgg ctttttagca gagcaatgcc ttcagtcgaa gaaattccat
    33301 tatctaccgt taagactaaa tccgcccctt ttgctaatac catttcagca accgctacac
    33361 tcaatccgta cccctgagaa aaacgatccg gaattaaata atctacctta tcgaaaccca
    33421 attggcgtaa cgcaataagg gcaagcgatg tactggttgc accatctgca tcaaaatcac
    33481 ccacaataat gatccggctt ttttcacgaa aggcttgtaa tagcaagtca acggcttgct
    33541 caatattggc aagttgctgt ggtctatgca aattctttaa attatgctct agttcttgcg
    33601 tattctttat gcctcgactt tgatagattc gatttaataa cgggtttgta gagactattt
    33661 ccgttgttaa taatgggcgc cttttaatta ttttttccac aatactcttc tttaatgaaa
    33721 caacaagcgg tcttcttttg caaaaatttt acaaaaaaag accgcttgta ttcaagttaa
    33781 tgaattactc acttaacatt ttcgctaatt ctttaggctc tacataacca ccaatcaact
    33841 caccttctga agttaccata tttggggtac ctgtcacacc aaatttaatc cctaattggt
    33901 aatgtttttt cacaatatcc ggcgttttta tttgggttgg taatttacca tcttcagcat
    33961 cattcagtgc ttttactttg tctgctgatg tccaaatagc ttccatttgt tttgctgttt
    34021 gggtattcat tccaccacgc gggaatgcca aatagcgaat ggtaatacct aaatcattat
    34081 attctttgat tttagtatgt agtaaatggc aataatggca agtaatatcc ataaacaccg
    34141 taatcacatg tttctcattt ttcgctggat atacgatcat ttcattagtg tatgaattca
    34201 attctgccaa caatccttga ttagtaatat caatcgcttt accatttttt agctcaaata
    34261 ctttaccttg aattacataa cgaccgtctt ggctgatata tacaacacct tcatttgaag
    34321 tcgccatttt aaagcctgtt aatggagaat ctgaaatttt aacatctgtg gctccaattt
    34381 tttcaagctg gctttttagt tttgcatctg aagcaaacgt gatggttgat aaacacatta
    34441 atcctaaagt gattagattt tttttcattg agaatcctta catttttaat ctactttcta
    34501 cattcttcgc tttatttaag aatgcttgac gttctttatt acccatacct gaatttgagc
    34561 caggcaattt taccgtaatc gggttgaccg gtcgaccatt aatatggaat tcatagtgta
    34621 aatgaggccc ggttgaaccg cctgtattac ccgataatgc tatccgctcc ccttttttaa
    34681 cactctgccc tggttttacc aacgttttgc tgaggtgcat ataaacagtc gtaatatgtc
    34741 cgtgttttat ccgaatataa cgtcctgctc cacgggcttg atatgccaca tgctctacga
    34801 caccatcact tggtgcgatg atcggagtac ctattggcac gccatagtca acccctttat
    34861 gcggactaat tctccctgta atagggtgtc tgcgtttggg gttgaaagaa gaagttactc
    34921 ttgctgcaaa taataatgga tgacgagcaa atcctccact taatgtttca ccatatcgac
    34981 tataatagcg tccattatct gcttgaatag cataataact ttttttactg ctaattacat
    35041 ggattccttc cacatttcct aaatccgtta ctttgccgtc aatatattcc cgcttaatca
    35101 gaattgcaaa cctatcccct ttttttaatt tattcgtcgc aatttgtgac tgcaatccaa
    35161 ccgctagctg gttaatttgg cggtctgata agccaacggc ttttaagcta accgcaaaac
    35221 tattctgaat agttcctctt acaacatcta acttccattc cccttttttc tcaaatcttt
    35281 gaaaagaaaa tttaccattt tcttttcgct cataaacccg ttcctctttt tcggaaacca
    35341 gccagttcat atattctaat tcaccgtcat tatctaatac ccaataaaat tgttgacccg
    35401 gttctaattg tgctaatgcc gaatgttgct taattaaatt tttcgcaacg gatgcagtta
    35461 agcctgattg ctctaataca tctttaagtt tatcacctcg agctacggta taactgaatt
    35521 ggttttgaat tcgtagtgct tgatcagcca catcaagtaa atcttctaat gccttttcag
    35581 cttcttctgg gagtttttcc ccaggaactt gattttcaac cgtttcaatc ccttcttcta
    35641 cttcatcgtc ttgcccaact aattcatctt cataagaagt cgctgtttga tcatcaacaa
    35701 tttcgtcgtc atgttcgatt actaatgccg actgagtcag taaatcagtc acataattaa
    35761 taaaactgga atgttgctcc tgatggagag tattattttc cgccaaatta gtgttgatac
    35821 tctgatattt ttcctgttta tcaatggcaa taatatcttc ctgtgaagat gtattattga
    35881 ttgaggattg atcttttagt gcgagaacaa tatcaacaaa tagactaaat accgctaata
    35941 agaaaaccgc aatcttaaaa tgttttttat gtcgcttacg atctctcgct aaaattacat
    36001 gttgcaaaat atatcccgct atttttaaaa tttactaaaa tttacatatt tttctgagta
    36061 gactatttta ccaagaaaaa attcatttaa tctattgtca caacacgaaa aatcagctaa
    36121 ttttaactca atacccctaa tttttttata tcaatgaaaa tccatcatct taaaccgaat
    36181 ctaaatacca ctacatttga actattcaaa cagaatttat ccgcgacatc actggtttct
    36241 cttgagaata ttgaagtgtc tttcaatgga caaaaagcat tacaaaatat taatttatct
    36301 atttatccta actctatcac gacgatagtc gggccaaatg gtggaggaaa atctaccctg
    36361 cttaaaattt tgctaaaatt acttagccca aataaaggaa aggttattca tcaaaaagga
    36421 ctcaaaattg gctatgtacc acaaaaattg catttagaac cctcgatgcc cattactgtt
    36481 tatcgatttc ttgcgctaaa accacatact accaaagaaa tgattaacca agcactagat
    36541 ctgttttcta ttacccatct cactgaaaat agtatgcaaa aattatcggg tggtgaactt
    36601 caacgtgtat tgctggctcg ggcaatttta gatcgtccgc aactcttagt gttagatgaa
    36661 ccaatgcaag gcgttgatat tataggccaa accgaactct atcaattact taataaaaca
    36721 agggatctcc ttaactgtgc tattttaatg gtctcacacg acttaaatat tgtgatggcg
    36781 aatacagatg aagtgctttg catcaataaa catatttgtt gtgccggaag ccccgaagtc
    36841 attacacacg atccgagctt tatccatttt tttggcgacc aatttgcacg taatgttgca
    36901 ttttattcac ataaacataa ccatcaccat aatttacatg gcgatatctg ccttggtgaa
    36961 tgtagttgtg agcactgata ggcgtccttt ttaccaaatg tttaaaattt gtaaaaataa
    37021 tgctaaaaat aaccgcttgc agcacaagat ttatctaaaa atcagactta cttcacattt
    37081 tatttgctta aattggagta taataagggc gtgatttcat accacaaaca ggtcaggtct
    37141 ttatgcaata tacacatttt gatgattggc ttgcatcatc tgcattaggc ggtgcaaacc
    37201 aatcttatat agaagaaatt tatgaacagt atctagaaaa tccagcaaat gttgatgaaa
    37261 gctggagaaa catctttgat tcatttccta aaactcccca agttgaacaa gctcacaccc
    37321 ctattcgtga ctatttccgt aaattagccc gtgaacagca acctcaatcc gtcactatta
    37381 ttgacccaga agcaggggcg aaacaagttc gcttactgca atggattaac gctcaccgtt
    37441 tccgtggcta tttagaggca aaactagacc caattaacta ttaccgttgg aaaacctcca
    37501 gcgtgcctga attggactac aaatatcacg gcttcaccga tgaagatctc aacgaaactt
    37561 ttacggtcgg tcgctatgtc tatgataaag acacaatgaa gctcagcgaa ctggataaag
    37621 ccctaaaaga aacttattta gggcctattg gtttagaatt tatgcacgtt caagatattg
    37681 aacaacgcaa ctggcttcaa gccaaaatgg aaagcgtgct aaacaaaccg ctgttcacca
    37741 aagcagaaaa actgaattta ttaagcgaat tgaccgctgc cgatggttta gagcgttact
    37801 taggggcaaa attcccgggg gcaaaacggt tctcattgga aggtagtgat gcctttattc
    37861 cgatgatgaa agaaattatc cgccacgctt cccgtcaagg tatgaccgat gtggttttag
    37921 gtatggcaca ccgtggtcgt ttgaatatgt tagtgaacgt atttggtaaa cgcccggcag
    37981 aattgtttga tgaatttgcc ggcaaacacg ctgatgaaag ccgcacgggc gatgtgaaat
    38041 accaccaagg tttctcctca aactttgccg tagatgataa aaacgttcac cttacccttg
    38101 ctttcaaccc atcgcattta gagattgtta gcccggtggt aatcggctca gtgcgtgcaa
    38161 gacaagaacg tatgcgtgat atcgaacacg aaaaggtgct tgcggtgacc gttcacggtg
    38221 actctgcagt ggcagggcaa ggtgtagtgc aagaaacctt aaatatggca aatgttcgtg
    38281 gctataaagt aggaggcact atccgtattg tgatcaacaa ccaaatcgga tttaccacct
    38341 ctaacccaaa tgacacccgc tccaccgaat tttgtaccga cattgccaaa atgattcagg
    38401 caccgattat tcacgttaat ggtgatgatc cggaagctgt tgcctttgca gcgagaatgg
    38461 ctgtggaata tcgtactaaa tttaaacgtg atatttttat tgatttaatc tcttaccgtc
    38521 gtcacggtca taatgaagcc gatgagcctt tagcaactca gccaatgatg tatagcatca
    38581 tcaaaaaaca cccgacacct cgcaaagtct atgcggatcg tttaattacc gaaggtgttt
    38641 taaccaacga gcaagaaatc gagatgttaa acctgtatcg tgatgcctta gacaacggcg
    38701 aatgcgttgt gccggaatgg cgtgaaatgg atatggcagc ggtcgattgg ctacaatatc
    38761 tcaattacga ctggactgcc ctatacgaaa gtaaattccc tgaagaacga ttcttaacca
    38821 ttgccaaacg ggtgtgcgaa tatccggctt cgcttaaagc tcattctcgg gttgaaaaga
    38881 tctacactga tcgcaaagag atgtatgaag gcaagaaatt attcgactgg ggtatggctg
    38941 aaacaatggc atacgctact ttgttagacg aaggcacaca tgttcgcctt tcaggagaag
    39001 atgccggacg tggcactttc ttccatcgcc atgcggtaat ccataaccaa aatgatggaa
    39061 caggctatgt gccacttact caactgcacg ccaatcaagg gcgtttccaa gtatgggatt
    39121 ccgtactctc tgaagaagcg gtactcgcct ttgaatatgg ctttgccact accgacccga
    39181 aaacactgac catttgggaa gctcaatttg gagatttcgc taacggagct caaattgtta
    39241 tcgaccaatt tatcagctca ggcgaacaaa aatggggcag aatgtgcggt ttagtgatgt
    39301 tattaccaca cggctatgaa ggtcaagggc cggaacactc ctctgcccga gtggaacgct
    39361 atttacagct ttgtgctcag caaaatattc aagtttgcgt gccatcaaca ccggcacagg
    39421 tttaccatat gttacgccgt caagcgatcc gcaaaatgcg tcgcccattg gttgcaatca
    39481 caccaaaatc attgctacgc cacccacttg cggtgtcatc tcttgatgaa ttgattaacg
    39541 gttcattcca aaatgtgatt ggcgagctcg ataatatcga tcctaaacaa gtcaaacgtg
    39601 tggtgatgtg ttcgggtaaa gtgtactacg acttaattga aaaacgccgt gaaaataacc
    39661 aaacggacgt tgccattatt cgtatcgaac agctctaccc gttcccactt gaagaaatgc
    39721 aacaaattct cgagccttac gctcacgtta aagactttgt ctggtgtcaa gaagagccac
    39781 taaaccaagg tgcgtggtat tgcagcaagc acaattttga ggcttctctg ccggaagatg
    39841 caaaattaac ttacgcaggc agaccggctt ctgcttcacc ggcggtgggt tatccatcgt
    39901 tacacgcaaa acaacaaaaa caacttgttg aagatgcttt aacgatcgct gaataataaa
    39961 atgggcgtat atacgcccta caagcggttc acttttaacc aaattttaca atttacgctg
    40021 tcggagtttt aaaactctct cgaaaaaagg aataagttat gaccattgaa attttaaccc
    40081 ccgatttacc cgaatctgtt gccgatgcga ccgttgccac ttggcataaa aaagtgggcg
    40141 acaatgtaaa acgtgatgaa attttagtcg aaattgaaac agacaaagtc gttttagaag
    40201 taccggcttc aagcgatggt attcttgcag aaattaccca agaacaaggt gctactgttg
    40261 tatccaagca atctctgggt aaattagtag tagctaaagc cggtgatatt agctctgcaa
    40321 ctattgagca aaaaacagaa tccacgccat cagaccgcaa acacgcagca attgaaaaca
    40381 gccacgcgaa cgctgatgat caagggcctg cgattcgccg tttattagcc gaacacgact
    40441 tacaagccgc tgatattcaa ggcagtggtg taggcggcag aatcacccgc gaagatattg
    40501 aaaaagagat tgccaaacga gtgcaaatca accaagtaaa agggtctgca accagccaaa
    40561 acaccgttag cactgtagca tttaacagcc gtagcgaaaa acgtgtgccg atgacacgac
    40621 tccgcaaacg tattgccgaa cgcttactag aggcaaaaaa caccactgca atgctcacta
    40681 cttttaacga gctggatatg caaccaatta tgaatttacg caaaacctat ggcgaaaaat
    40741 tcgaaaaaca acacggtgtg cgtttaggct ttatgtcgtt ctacattaaa gccgtggttg
    40801 aagcattaaa acgctaccct gaaatcaatg cctccattga tggcgatgat gtggtttatc
    40861 ataactattt cgacatcagc attgcggttt ctaccccacg aggcttagtc acacctgtgt
    40921 tgcgtgattg cgacaaaatg agtatggcag atattgagaa gaaaattaaa gaacttgccg
    40981 aaaaagggcg tgacggcaaa ttaaccgttg aagacttaac cggcggtaac tttaccatca
    41041 ccaacggcgg ggtattcggt tcattaatgt ccaccccaat tatcaacccg ccacaaagtg
    41101 cgattttggg tatgcacgct attaaagacc gccctgtcgc cattgacgga caagtagtga
    41161 tccgcccgat gatgtaccta gccttaagct atgaccaccg tttaattgac ggtaaagaat
    41221 ctgtcggttt cttagtggca gttaaagagt tattagaaga cccaacccgt cttcttttgg
    41281 aaatttaatc gaaaatatga ccgcttgtac ttttagctac aagcggtctg tttttaataa
    41341 aatttgacaa aatccgataa acgctctatt tgagttccct tctgagccac ctgagcgact
    41401 ttgaatttgt aggaaaaatt tagtgtttga gcttacaagg caagcgagtt ataaattttt
    41461 ccgtcaagca aattcaaact aagcgaagaa agtggcgaag cagggtgtgc tttcttttgg
    41521 ttacttttct ttgcacaagc aaagaaaagt aacataaaaa aaaccaaacg aggaaactct
    41581 atgaatctac acgaatatca agcaaaacaa atattcaaac aatacgggct tcccgtaagc
    41641 caagggattg cttgcaaaac ggcagaggaa gccgttgagg caattaaaca actacaaggt
    41701 gaacaatggg cgataaagtg ccaagttcac gctggtgggc gtggcaaagc cggcggggtg
    41761 aaactggttc gcaatgaagc cgaagtgcgt gaatttgccg ataaatggct cggcaaacgc
    41821 ttagttacct tccaaaccga tgctaatggg caaccggtta ataccttata tttagaagaa
    41881 acctgcaata tcgaccgtga attgtactta ggtgcagtgg ttgatcgctc cgctcaaaaa
    41941 gtgattttta tggcatcaag tgccggtggt atgaatattg aagaagtagc ggagaaaacc
    42001 cctgaattaa ttcacaaagc ggtaattgac ccactcaccg gtgggcaggg ttatcaaggg
    42061 cgtgaattag catttaaatt aggcttgaaa ggtgatgaag ttaaacaatt tgcggatatt
    42121 ttcgtgaaac tggctaacct atttgttgaa aaagatttag ctttattaga ggtaaatcca
    42181 cttgtcatca ctaaagaagg gcaactactc tgcttagatg caaaaatgtc gattgacagc
    42241 aatgctctct accgccaccc agaacttaaa gagttgcaag acccatcgca agatgacgaa
    42301 cgtgaagctg aagcggaaaa atggaatctc aactacgttg cactagatgg caatatcggc
    42361 tgtatggtaa acggtgcggg gctggcaatg gggacgatgg atatcgtcaa actttatggt
    42421 ggtaaaccgg ctaacttctt agacgttggc ggtggtgcaa ccaaagagcg tgtagcagca
    42481 gcttttaaat tgattttatc tgatccgaat gtgaaagccg tgttagtcaa tatttttggt
    42541 ggtatcgtcc gctgcgattt gattgctgat ggcgtcattg ctgctgtaaa cgaagtcggc
    42601 gtgaatgtgc ctgttattgt gcgtttagaa ggcactaatg ccgcacaggg gcgtgagatt
    42661 ttagccaata gcgggctgag tattctagcg gcatcatcat taaaacaagc ggctgaatta
    42721 gcggtaaaat ctgcaaatta ggaggaaaaa tgtcgatttt aattgataaa aacacaaaag
    42781 taatttgcca aggtttcacc ggcggacaag gtactttcca cagcgaacaa gcccttgctt
    42841 atggcacaca attagtcggc ggagtttcgc cgaataaagg tggcacaacc catttaggct
    42901 taccggtttt caacaccgta cgcgaagcgg tagaagcaac cggtgcaact gcaaccgtta
    42961 tctacgttcc ggctcccggc tgtaaagatg ctattttaga agccattgat gccggcatcc
    43021 aactaattgt ctgtattact gaaggcattc caaccttgga tatgctacaa gttaaacaac
    43081 gtctaaacca aaccggcgtg cgaatgatcg gtccgaactg cccgggtgtg attacccctg
    43141 atgagtgcaa aatcggcatt atgccgggca atatccacaa aaaaggcaat atcggtattg
    43201 tttctcgttc gggtacttta acctatgaag cagttaaaca aacaactgac gaaggctttg
    43261 gtcaatctac ttgtgtcggt atcggtggtg atccgattcc gggatctaac tttattgaca
    43321 ttttaaaact gttccaagac gatcctgaaa ctgaagcaat tgtgatgatt ggtgaaatcg
    43381 gcggctctgc cgaagaagaa gcggcagctt tcatcaaaga aaatgtcacc aagcctgtag
    43441 tcagctatat tgccggtgtc accgcaccaa aaggcaaacg aatgggacac gccggtgcga
    43501 ttatcagcgg cggcaaagga accgccgatg aaaaattcaa aatccttgaa gatgccggtg
    43561 tgacaaccgt cagaagttta gccgaaatcg gttcagctct tagaaaaatt ttaggctaaa
    43621 ctaaaagttc aagcagtcat atttacccat ttttttgtaa atatgaccgc ttgttttttt
    43681 gctattaaat tactctttcg atttccaaat taatgggtca acacctttat ggataaggtc
    43741 ttgatgttct tcaattctaa acactggctc tttgccactt ttcacttggc gaagatagtc
    43801 ttttaaaata atccagacaa tcggagcaag aattaagata gccaccaagt taattaccgc
    43861 cattgatgcc atcactgtat cggcaaatgc ccatacaatc cctccgtctc ttactgcacc
    43921 gaagtacaca aagaataaaa cgatggcacg gaatccccac acaaaccacg gactgttttt
    43981 aatgtagcgg atattagttt ctgcataagc atagttaccg ataatggatg tgaagcaaaa
    44041 cagtaaaatc acaaatgcta aaaagtgtaa accaaattca cctaaatgga attgtaacgc
    44101 actttgagta agtgaaatac ctcttaaagt ttcaccacca tagttatttg acataagaat
    44161 gatcactgca gtacaagtac agactacaat tgtatctaca aatacgccca acatttgaat
    44221 taagccttga cttgccgggt gtttcgcatc agaagtcgct gcagaatttg gtgcagatcc
    44281 cataccagct tcgtttgaga ataagccacg tttaatcccc attagcatag ttttggatac
    44341 caatgctcca aacgttccac ctgcagcagc agaaaaatca aaggcgcttt caataattaa
    44401 agagattata cttggcactt tttcaatatt catacctaaa ataattactg caataatcaa
    44461 gtagaataat gccatcattg gaacaacttg ggcagaaact ttaccaatac gcttgacccc
    44521 tccagaaata attaaccctg taatcaccac taatgtcatg cctacgtaga ctgggttcca
    44581 atcccacgca tttttggttg cttccacaat agagttagat tgcacagcat taaaagcaaa
    44641 accaaaggtg aagataagcg tcactgcaaa agcaatagca agagaaggca gttttaaacc
    44701 acgagtgatg taataggctg gcccaccacg aaacattccg tttggatctt tggttttata
    44761 caactgagcc agtgaagact cagcaaaggc ggaactcatt cccattaagg cggtaatcca
    44821 catccagaat accgcacccg gcccacccaa agcgattgca gtagctaccc caccaatatt
    44881 accaacccca acacggctgg ctaatccagt agtaaaggct tggaacggag ttaatgattt
    44941 cccttccgta gaacgtcctc cccacatttc acgtaaactt tgcggaagaa gacgcagctg
    45001 gacaaaacct gttgtaagag tgaaaaataa ccctgcaccg agcaatagga taatcgttac
    45061 atcccaaagt ggaccgtcga ttgtgttcac aatccaagtc agtacactct caaaaaatag
    45121 aataattgaa tccataaaga cctcttaatt gaaaataaaa cttccacatt gtaaccgatt
    45181 taatattttt aaaaagtttt tttaatactt ttaataaaaa tttttaataa cttattaatt
    45241 tagcgtttga aaaaaacgcc tgtaccagca tcaatgaaac tactgtgaaa taataccatt
    45301 ccaaatagaa ttaatgcgag tccaagtgta aattttaata tccaaacgat atttcgatta
    45361 atttgagctg aaaaatacca ttggctaacc ttaactgcct tatttctcgc aatgataaca
    45421 agataagcaa ataagcttaa agtcagccct gttcctactg ccatagctaa tgctgaaata
    45481 accccccaag catagagatt gagcgtataa gaaagaaata aaacaagaat agcgccagag
    45541 caaggtcttg agccaatact taataccaac atcagctgtg ctttccaatc tctcacttgt
    45601 tgcatttcat ttgaagtcgg taaatgttta tgcctacagc tacaattttc ggtatgaata
    45661 tgccctttct gcgtgacaag cggtaatttt ccagcttttt tttgcgaaat acgaatggat
    45721 ttaatgatag gctttcgcgc tctgttcacc gttcgataca cctggtaaca ccagtaaatg
    45781 ccgaacaaga tcatcaaacc aaagctcccc cgctcaaccc attttagggt taaattaaaa
    45841 tattggcgag agagagtaaa aatcaccaca atcaccgtca ccaatgaaat tgccactaag
    45901 ccctgcacca atgctgaggc aaaagtgatt ttcatcgcct gatttaattt tgttttttca
    45961 aaagaaagat aactgctcag aataaatttt ccgtgaccag gcccaactgc gtgaaatact
    46021 ccatataaaa aactaataaa tactaaggta ataccggctt tactttgatt ttcagctaat
    46081 tcattgagcg aagcggaaag ctgtaaatta aagttttttt gccattccat cactttaaac
    46141 aatatcattg gataaagctg ataaagagca aataggctca aaaatcctat cactatcatt
    46201 ccccaatatg ttgcttttaa tcgcatataa tctccacttt ttgagcaaat tgggcaccaa
    46261 gagagtaatc tccattttca ggcatatcca gtgattggtt tttatccaaa ccggaagcat
    46321 ataagcgtaa cttactatct acttgaggtt gcaccaatgt tgctttacaa cttgcattac
    46381 tggtattgac atcagcaggg cgattatatt ccatcgcaat ataataactc ggttcataag
    46441 tatagaatct cactttactc tgctttaatt cgtgaggttt agctaaatga aaagtaatat
    46501 aaaaaatcac tctgttattc ttgatttcaa agcgagtcgc tgtgggcttt gtcgtaaatt
    46561 ttatcggctg attttgacta tcatataagg tgctaaaata atgattttgc aatgcggttt
    46621 gcaccatttc tgcagtgata ttctgctgag ttttttcttt atcttggcta tttttcactt
    46681 cataaattaa ctcagaagaa gcaatttcat ctagcatcca ttccatttgg aaagatttca
    46741 acattgagcc ttccacaata acattcgttt tcaaatcaac aaatgaatgt gggtgagaaa
    46801 aaactggcat tgaatataat gcaattaacg tgataatcgt cttaataaat ttcatattta
    46861 ctttcactat aaaataaaaa agcgaacaag ttccccctgt tcgcatttca agaatttagt
    46921 gagttggtcg ataagccgag ttctgtcgtg gacaatcatt cctctagacg tacatttaca
    46981 catacgctca agcaacctac ccgaactctc agcgggccac cgattgagtt cctatttggt
    47041 cttgctacga gtggagttta ccctgctgtg gaatgttacc acccacacgg tgcgctctta
    47101 ccgcaccctt tcacccttac cgacaaagcc ggcggtctgc tctctgttgc actggtcgta
    47161 ggctcacgcc ccccggacgt tatccggcac tctgccctgt gtagctcgga ctttcctctc
    47221 gtttacttgt cccccagttt acgttttcac gaatttagag gcttcaataa accagcgatt
    47281 gcctaaccaa ctcagcacta gagtataatg ctttcgcaaa aaattgcaag gaaataaccg
    47341 cttgtagtta ttatggcaaa ataaaaaagg attaagttca tttaaaaact taatcctctt
    47401 cgctttaatt cactcgtaaa aattacgcac gtttgaagtc taagtgaact aattttggtt
    47461 tctctatttt attacaataa tttcaaaggg ttatttaatc aatttccttt ctatttccga
    47521 aactatatac atttttccga aactcaaatt ttaatcagat tataaaacaa gctattttcc
    47581 ttttttctca ttccaaaaat accatccaaa acatcttacc gccaaccaag tgctccacgc
    47641 aaaaataggt ctattttgcg caatcaaaca atcccttaac cgcttatctg cttccgctct
    47701 actgactttt ccgtttacgc ccacgatcgt gttgatgaca gcacgaatta atattttcag
    47761 gggcgtgtac cgcaatcaat tttaattata accaattgtt tttaaattaa attattgaat
    47821 tacatttaaa a
//
LOCUS       DANMCL010000006        41096 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.006, whole genome shotgun sequence.
ACCESSION   DANMCL010000006 DANMCL010000000
VERSION     DANMCL010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 41096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41096
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.006"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(56..466)
                     /locus_tag="PXF40_000305"
     CDS             complement(56..466)
                     /locus_tag="PXF40_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801683.1"
                     /translation="MFIPKSSKLKTNNYIEELNIKSIGETDMKKALTLLALSLFALPV
                     QADSLELARNKVKQIFISDEEPKVKDATWTAPFIFKVGVFDDGTKRDGYAEYVCQVLY
                     DHGFKGKGVLVSVIDIKKLVQTGDWVDLGKAKCQ"
     gene            complement(484..1002)
                     /locus_tag="PXF40_000306"
     CDS             complement(484..1002)
                     /locus_tag="PXF40_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801684.1"
                     /translation="MEHQNLTHLVYITSHKQIGVYSISNLNIDDLYFKGYCIQKNRVI
                     TLRADRIIKQFDDLALAENYAKNIPQDVFYLFDSLLNQQRKEKITPIYKIGLCFTGFK
                     QARKNELIQLAVDNDLRVVQNVTGAVDFLIFDKESKTVGPAKLAKAEKLGIKIIDDEE
                     FLYMLETGVVPD"
     gene            complement(1006..1692)
                     /locus_tag="PXF40_000307"
     CDS             complement(1006..1692)
                     /locus_tag="PXF40_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5801685.1"
                     /translation="MDTLASRLKIVLDQKGLTQEKFAEQIGVSQPSVFKILNGQTRNP
                     TRIYEIANVLDVDVNWLKTGKGEAPDFAKIGKNPTAYEEESSMLRLEVLDVYASAGNG
                     SFVTGDLTAYTHAVEFENAYFAQVFQRANAKGLSIINVDGDSMEPTIGNGDLLFVDTT
                     KSAYQGDGVYVFSYGENLYVKRLQFAGDELLVISDNPLYKEWRITSENEHKFQIHGKV
                     EFMQGHIRRV"
     gene            1816..2028
                     /locus_tag="PXF40_000308"
     CDS             1816..2028
                     /locus_tag="PXF40_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5801686.1"
                     /translation="MTNKKIQKAIELVGTQTKLAEACGVSQPTVLKWLNGGGISAEYL
                     LKIEAATNGQVTIREICEELGNATAK"
     gene            2012..2296
                     /locus_tag="PXF40_000309"
     CDS             2012..2296
                     /locus_tag="PXF40_000309"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801687.1"
                     /translation="MQQQNKSPEQAGLASGKFTVRRNQDGKWRLDLTLLDFGISSPET
                     TQARCKLLQELQLALLQGQGHLNTVGVNVRKAGPVVCVGSLLSDLLNHQE"
     gene            2505..2777
                     /locus_tag="PXF40_000310"
     CDS             2505..2777
                     /locus_tag="PXF40_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801688.1"
                     /translation="MNLDHTCTNCKSKNLRVRTSEKIGLLTIQAVTYCNNCGTEQLVQ
                     SQIIRVRTPIYKERPEAMRINKCLMEADLNTPDLFDGVVADQPKQD"
     gene            2860..3192
                     /locus_tag="PXF40_000311"
     CDS             2860..3192
                     /locus_tag="PXF40_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801689.1"
                     /translation="MSKQLYYRHKSRWNRLNRLKKMNKRRLNLFLQEKRVANLESRLA
                     DEVELAKLNSEQIGDLLQALELKVNRLIRQNEKLKARVIKLEKVKQTQKQGLFAMFKK
                     VLGSKGNP"
     gene            3205..3498
                     /locus_tag="PXF40_000312"
     CDS             3205..3498
                     /locus_tag="PXF40_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801690.1"
                     /translation="MDFVATYQKIRINTNHKQFTCNHLGEIWGKENDDFKRFLLRVAF
                     LQDNPEPKPWGAYSPQEKRLLHSFSLWLEQIADFQRVMKRESKLREKHINAPD"
     gene            3650..3892
                     /locus_tag="PXF40_000313"
     CDS             3650..3892
                     /locus_tag="PXF40_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801691.1"
                     /translation="MSLITVNDYKIKKDILDADGKPCYQLYQGEELLRDTTNLSEIIA
                     YMFIRAEDKPFDELYNHIINQEAGAKTDIKFTVTVR"
     gene            3889..4221
                     /locus_tag="PXF40_000314"
     CDS             3889..4221
                     /locus_tag="PXF40_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801692.1"
                     /translation="MSQITKSAYTHIHPNWQAPRGNTYRIERYELKRRYALFCNGERV
                     VLYKDPTHPNKNVESHIESDVLLLWLLKNELGWSGNIKEPLSPQDVENIRLLEQAFCL
                     TYNGTFIK"
     gene            4218..6578
                     /locus_tag="PXF40_000315"
     CDS             4218..6578
                     /locus_tag="PXF40_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HDL5801693.1"
                     /translation="MNYQNEILSATEAFAIGVSLPPVAGASACALELHSDRLYQAFKQ
                     PYTSMVQQELFSKDPIHEPLRQSYFERLPRALAEHFGRQYKQKLHYQSQYDTADWFKA
                     EMARKMPRIEAVISQYCDVFDFLKQSHQDLDFLAELDSNVYFGAGVDTQQAVQKIKQD
                     AEVKGIQLPMHLCRLENSSRYLKAHGIRPLAYQTEEQIKQLALGIAYRVRQIQQDNIE
                     QNMHKATDGDTAYSVLLECYRAMMGEVNKLKIDSPYQKKARKGRLTEEEITTGFLKMT
                     CEKWWTRKLSKIAEQMKEHLAIACGMVNMLSPYCSNARLKAFEAQRKANIDYLKSMII
                     ANIAEPEEQLSLFETWLKSASNPKIKRLELLTRMNGFERYADKQGHEGWFITLTAPSK
                     YHAMLSRTSSVNPKWNGASPAETQVYLVNTWAKIRAKLNREGVMAYGFRVAEPHADAT
                     PHWHLILFTRPEDMEKLRRVFLSYALEVDGTEAGAKKYRCKFKRIEKEKGSATGYLVK
                     YVSKNIDGFGMDGELSDEANIQAKENAARVGAWSSVWCIRQFQQLGNIPISLWRELRR
                     LGSVEQEDETLEKLRVIADSGEWDVFTEELGGALVKRADLVARITYTERKSETGEALY
                     TMYQEPSLKVSGIINIKNGVQINTRPKEWSIQLKPKNWEEQQLQKKLENATETERAEV
                     KRKYYEKLGFNEEAIALLGELAPPWTCVSNCTGSKNNQISEEARNCLRNELITMRGRV
                     TEHQIDDLLNGKRLKIWGNSQKTMFVSYSRGRLIEHIVDNYESFLN"
     gene            6591..6923
                     /locus_tag="PXF40_000316"
     CDS             6591..6923
                     /locus_tag="PXF40_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801694.1"
                     /translation="MVKFIRLNLINYFIEKDEYGEPVRCRAFRYDEIIQTKFIEGFRE
                     GEIPADDYGFEDWNGSVLILNEEGRKYFENYLFDVKKNYCRARDNYVYVLETLDEIEM
                     KLGLLEAK"
     gene            6923..7375
                     /gene="ssb"
                     /locus_tag="PXF40_000317"
     CDS             6923..7375
                     /gene="ssb"
                     /locus_tag="PXF40_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5801695.1"
                     /translation="MNLVTLVGRLGQDPDIRTMQNGEKAAALSVATSEKWTDKQTGVK
                     KESTEWHRVVLYRRLAEIAELYVKKGHLVSIIGKIKTRKWTDSNGVERSITEIIAEQM
                     QMLSSGEKNTPNTPNKAENKPQPKQKNQDVMTADEQKDIPQFDDDIPF"
     gene            7386..7718
                     /locus_tag="PXF40_000318"
     CDS             7386..7718
                     /locus_tag="PXF40_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801696.1"
                     /translation="MREWEKQMPFSANLHIRPTGKFEVKNVNIEQIIGERGKNYGNFD
                     DVATMSQQLKAVLLDTNTQLKPHQKEAGEMICLKLARIFAGCNPDYEDNWRDIAGYAV
                     LGGKLNEK"
     gene            7708..7977
                     /locus_tag="PXF40_000319"
     CDS             7708..7977
                     /locus_tag="PXF40_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801697.1"
                     /translation="MKNKMGSKFIRVRVEHPQRKKEDIELVQDVVAYHIFNLFKFEES
                     GLRGFSQYDLEIDVKVKPVLEQKEMPVDVWIDDLGGKNGTITSGQ"
     gene            7952..8242
                     /locus_tag="PXF40_000320"
     CDS             7952..8242
                     /locus_tag="PXF40_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801698.1"
                     /translation="MEQLQAVSNEQVFAKLCEVERLLKTKGVNEHSRELWDLGDVAAY
                     FGYTKEHTSRSVVSSPHFPKPIALDGLRGKGRGAKKWVSGEVVKFCLMWKVK"
     gene            complement(8512..8694)
                     /locus_tag="PXF40_000321"
     CDS             complement(8512..8694)
                     /locus_tag="PXF40_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix protein, CopG family"
                     /protein_id="HDL5801699.1"
                     /translation="MAMSRNEIQAKSEAKRGIKQKSFKLPLEVIAEIEVLSQKLNIPQ
                     NQLIIQAIQQFKQNNP"
     gene            complement(8972..9970)
                     /locus_tag="PXF40_000322"
     CDS             complement(8972..9970)
                     /locus_tag="PXF40_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5801700.1"
                     /translation="MATIIKNGNKYRAQVRKKGIYKTATFSTKTEANRWAYALEAQID
                     AGEYNTTPNILFAELIDKYLKEVTPTKRGKREERYRLLRIAGSNLGNIPLPALTKEHL
                     RQWQNQRLQEVQPVSVSRERATLSALFTKAMEWDYLKENPLKTLEKIKTPPARTRRYS
                     DEEIDKLIFVSGYSPNQPPLLMQQRAGAALLFAIETAMRAGEIAGLKWEHINLQARTA
                     FLPQTKNGYSRTVPLSTKAIAILNQLAQLEPNKQNSVFQLTSRSLDSNFRKLKQKANL
                     HNADLHFHDTRREALTRLSKYLTVMELAKVSGHRDLSILQNTYYNPDISELVSKLQ"
     gene            complement(10198..10274)
                     /locus_tag="PXF40_000323"
     tRNA            complement(10198..10274)
                     /locus_tag="PXF40_000323"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10238..10240),aa:Val,seq:gac)
     gene            complement(10338..11138)
                     /gene="apaH"
                     /locus_tag="PXF40_000324"
     CDS             complement(10338..11138)
                     /gene="apaH"
                     /locus_tag="PXF40_000324"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     ApaH"
                     /protein_id="HDL5801701.1"
                     /translation="MATYIVGDLHGCFNEFQLLLEKVNYNPKQDELFLTGDLVARGED
                     SLACLRFVKDSANNAKTVLGNHDLHLLGIKRVKPNDKIDAIFEAKDRLDLQNWLRNQP
                     LVIHHPKHQFLLTHAGISPEWDLATTLACAKEAEKVLQSDNYADYIAQMYENKPERWS
                     EDLQGVERWRYIINVFTRMRFCYTDKRLDFDCKLPLEQAPQELLAWFDLDNPLFTQKN
                     IIFGHWASLMGKCTRPNIYALDTGCAWGSHLTMLRWEDKQIFTQKRLK"
     gene            complement(11230..13206)
                     /locus_tag="PXF40_000325"
     CDS             complement(11230..13206)
                     /locus_tag="PXF40_000325"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HDL5801702.1"
                     /translation="MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYF
                     IPPAEMKKVMHGDSVKAVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVD
                     HPSIKQTIPANTHKKATEKLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAP
                     WWVTLARHEQPREPVANEKNYELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIK
                     QNGKRTGWRLVVAIADPTAYIPENSHIEKAARQRCFTNYLPGFNIPMLPRELSDDLCS
                     LVPNEKRPALVGFIETDLNGNLIKETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQ
                     SEETKQQIEWLHQFTQARIQWRAENALLFKEQGDYTFELNEDGSVKDIHVEYRRIANQ
                     MIEESMILANICCAKFLSQHAKTGVFNTHSGFDPKNYELVKSFLLQTLASDENRDELA
                     ERYSAERLATLEGYCQMQRDIQDYPEKFLELRLRRYLTFAEFKAEVAPHFGLGITDYA
                     TWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEESVLSRLQEARRQNRLVERDIADWLYA
                     RYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGAQIFVPFSSLHDNKEEMEYRQEELA
                     LYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII"
     gene            13366..13644
                     /locus_tag="PXF40_000326"
     CDS             13366..13644
                     /locus_tag="PXF40_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000738492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5801703.1"
                     /translation="MKKLLAIATVFSLAACSTQTLELSPAKEAQYDRVQHFFVSGLAQ
                     KQEIDAAKICNGADKVGKVETETTFFNGLLGTITYGIYSPRQIRVYCN"
     gene            13669..13965
                     /locus_tag="PXF40_000327"
     CDS             13669..13965
                     /locus_tag="PXF40_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bor family protein"
                     /protein_id="HDL5801704.1"
                     /translation="MKKLLAMSVLTALLTTACTTQTAHIGGKVTDNIKPTKSVTQSFF
                     IGGIGQEETLNVVEVCGSKDKVQQVETVLSGGDILLGLVTIGIYTPRTANVYCK"
     gene            complement(14018..14809)
                     /locus_tag="PXF40_000328"
     CDS             complement(14018..14809)
                     /locus_tag="PXF40_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5801705.1"
                     /translation="MGILTGKRILVTGLASNRSIAYGIANAMKQQGAELAFTYLNDKL
                     KPRVEEFAKEFGSDIVLPLDVATDESITECFTELSKHWEKFDGFVHAIAFAPGDQLDG
                     DYVNAATREGYRIAHDISAYSFVAMAQAARPFLNENAALLTLSYLGAERAIPNYNVMC
                     LAKASLEAATRVMAADLGKEGIRVNAISAGPIRTLAASGIKNFKKMLSAFEKTAALRR
                     TVTIDDVGNSAAFLCSDLASGVTGEVLHVDAGFSVMAMGELGDEE"
     gene            complement(14953..15726)
                     /locus_tag="PXF40_000329"
     CDS             complement(14953..15726)
                     /locus_tag="PXF40_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HDL5801706.1"
                     /translation="MKIVSEPKTSGRHTCTIHCQNCSISQLCLPFTLNETELTQLDNI
                     IERKKPIQKSQVIFKLGDELRSLYAIRSGTLKAYTLSESGEEQITGFHLPGDLIGFDA
                     ITNMQHEGYAQALETSMICEIPFDILDDLAGKMPKIRHQIMRLMSNEIKSDQEMILLL
                     SKMNAEEKLAAFLYNLSQRYSARGFSAKEFRLTMTRGDIGNYLGLTIETISRLLGRFQ
                     KSGMISVQGKYIIINRMEELAELAGAIKPQQNIIAQTTA"
     gene            15957..16382
                     /locus_tag="PXF40_000330"
     CDS             15957..16382
                     /locus_tag="PXF40_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5801707.1"
                     /translation="MYKHILVAVDLSEESLVLVRKGAALAEKCGAKLSLIHVDVNFSD
                     LYTGLIDINMSSVQYSVVEETNTALAELASKVNYPVSECLNGTGDFSQVLEEAVEKHN
                     VDLLITGHHQDFWSKFMSSTRRVMNNITVDMLVVPLADE"
     gene            16577..19204
                     /gene="alaS"
                     /locus_tag="PXF40_000331"
     CDS             16577..19204
                     /gene="alaS"
                     /locus_tag="PXF40_000331"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HDL5801708.1"
                     /translation="MKTTSDIRQSFLEFFQTKGHTIVPSSSLVPENDPTLLFTNAGMN
                     QFKDVFLGLEKRPYSRATTAQRCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYF
                     KQDAIKFGWEFLTSPQWLGLPKEKLYVTVYETDDEAYDIWHKEVGVPSEHIIRIGDNK
                     GAPYASDNFWAMGDTGPCGPCTEIFYDHGPEHWGGLPGSPEEDGDRYIEVWNIVFMQF
                     NRLADGTMEKLPKPSVDTGMGLERMTAVMQHVNSNYETDIFQTLIKEVATLLNVKDLD
                     NKSLRVVADHIRACSYLIADGVLPSNEGRGYVLRRIIRRAVRHGNILGAKEAFFYKLV
                     PTLATVMGQAGEVLTQKQAHIQKTLKAEEEQFARTLERGLNLLEEALAKVENNTLSGE
                     VAFKLYDTYGFPLDLTADVCRERDIKIDEDGFNAEMTAQRERAKASSSFGTDYNNVIK
                     VDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGD
                     SGQISAEICNFEVVDTQKYGQVFGHIGQLTSGSLSVGDKVNTIVDRERRHAITLNHSA
                     THLLHSALRQVLGDHVAQKGSLVSENILRFDISQPEAITKSQLEEVERIVNAKVRENI
                     QVIIEEMDIESAKAKGAMALFGEKYGEVVRVVEMSDFSIELCGGTHVKQTGDIGLFKI
                     TSEGAVAAGVRRIEAVTGENAIAWLHTLQQAVQQSAELLKADSHSFVEKIVQLQEKAK
                     RTEKELQQLKDKLAAQAGSDLAKQATQINGVNVVIQQLENVEPKALRTMVDDLKNQLG
                     SAVVVFATTAEDKVNLIVGVTKDLTDKVNAGQLVGAMAEKVGGKGGGRPDMAMAGGSE
                     PQHLLQALSLAQEWITAKL"
     gene            19294..19479
                     /gene="csrA"
                     /locus_tag="PXF40_000332"
     CDS             19294..19479
                     /gene="csrA"
                     /locus_tag="PXF40_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HDL5801709.1"
                     /translation="MLILTRKIGEVLLVGDDVEITVLSIRGNQVKLGVNAPKEISVHR
                     REIYERIKASVEEENAE"
     gene            19615..20502
                     /gene="galU"
                     /locus_tag="PXF40_000333"
     CDS             19615..20502
                     /gene="galU"
                     /locus_tag="PXF40_000333"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HDL5801710.1"
                     /translation="MKVIIPVAGLGTRMLPATKAIPKEMLILADKPLIQYIVNECVAA
                     GFKEIVLVTHSSKNAIENHFDTSFELETMLEKRVKRQLLDDVRSIVPKDVTLIHVRQG
                     QAKGLGHAVLCGRTVVGDEPFAVVLPDVLLGEFTANQKTENLAAMVKRFQETGYSQIM
                     VAPVPMENVSSYGVADCHGVDIPLGGAAPIAKMVEKPSIEEAPSNLAVVGRYVFSSNI
                     WNLLEKTPVGVGDEIQLTDAIDMLIHQETVEAFHMTGRSFDCGYKVGYMKAFVEYSLN
                     HDKCGKEFKAFIKELAKSL"
     gene            20767..22110
                     /gene="mukF"
                     /locus_tag="PXF40_000334"
     CDS             20767..22110
                     /gene="mukF"
                     /locus_tag="PXF40_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HDL5801711.1"
                     /translation="MQNELAQTIPELISWTKDREFSLSLSSDRLAFLLAISIYNQEQT
                     DGELLESDLIDLFRYVSNSFEQSDATFTQRANNAINDLVRQRLLNRFSSEFTEGLAIY
                     RVTPLGVGISNYYVRQREFSTLRLSIQLSIVADEIQRASVAAEEGIEQAQDERFWRNN
                     VFAPLKYSVAEIFDSIDLSQRIMDENQHQIRERIAELLSQNWHEAIMSCEQLLDETSG
                     NLRELQDTLNAAGDKLQAQLLRIQSCLMARNDLDFIDQLIVNLQNKLDRIISWGQQAI
                     DLWIGYDRHVHKFIRTAIDMDKNRVFGQRLRQSIQDYYNSPWLLYTAKADSLLDLRDD
                     EAMLNEAESVGELPSELEYESLSDVQEQIVSAMQAHLAPFRAEGKPIDLGVILREQLA
                     RFPESRHFDVARIIVDQAVKLGMASQDSQAVYPQWQPINEQGAEVQANVIDQYNK"
     gene            22159..22875
                     /gene="mukE"
                     /locus_tag="PXF40_000335"
     CDS             22159..22875
                     /gene="mukE"
                     /locus_tag="PXF40_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HDL5801712.1"
                     /translation="MTENIQDFISPKLALAIANPIFPELDSQLRAGRHINTEQLDQHV
                     FLMDFQAELESFYRRYHVELIRAPEGFFYLRPKASTLIARSAMSEMEMLVGKVLCYLY
                     LSPERLAQQGIFSQDDVYEELLSLADESKLLKAVNPRSTGSDLDRAKLAEKAGGALRR
                     LARIGIITRVGEQNSKKFVISESVFRFGADVRTGDDPREAQLRLIRDGEATTPALLNE
                     QAVEIDENIADEAPFDGENE"
     gene            23051..27511
                     /gene="mukB"
                     /locus_tag="PXF40_000336"
     CDS             23051..27511
                     /gene="mukB"
                     /locus_tag="PXF40_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HDL5801713.1"
                     /translation="MIDTTELQNNPQIAPLARPNDVQRGKFLSLTLINWNGFFARTFD
                     LDDLVTTLSGGNGAGKSTTMAGFVTALIPDLTLLNFRNTTEAGSTAGSRDKGLYGKLK
                     AGVCYAVLESFNSRGQRIITGVRLQQIVGRDKKVDIRSFSLQNIPQEQSIISLLTEQV
                     GNKARVLALNELKDQFENSEVQFKQYHSITDYHSFMFDLGVIPKRLRSAADRSKFYKL
                     IEASLYGGISSVITKSLRDYLLPENTGVRQAFQDMESALRENRMTLEAIKVTQSDRDM
                     FKRLITESTNYVSADYMRNANERRGNVQQALEQRKEWYAAKSKILLEQQRFVEFSRES
                     ADIAEAELALEADYNSANDHLNLVMNALRHQEKIERYQDEVEELNIKLEEQQEALEEI
                     AEIAENAQARADEADDHVEELRSQMADYQQALDAQQTRALQYQQAVNALEKAKQLTGL
                     VNLDLNNIEDYHAEFVAQAEDLTDQVFELEQRLSVSDMAKTQFEKAFELVCKISGEID
                     RLQAWEEARALLSAFPEQKMQAQQAVSLRQKLNDLEQRLQQQQNAQRLVAEFNQKSQQ
                     QLNSAEELDAYFEEQQARLEDLEAELSDFVEQRSTQRQQREQLNQQYQQLAKNAPAWH
                     TAQSALTRLEEQCGEKFEASQSVMQFMQNMLSKEREATLARDELARKEQMLDEQINRL
                     SQPDGSEDARLNQLAERFGGVLLSELYDDVSIEDAPYFSALYGEARHAIVVRDLEAVK
                     TQLEKLDDCPSDLYLIEGDPSAFDDAVFSAEELGEGVVVKVSDRQWRYSKFPEVPLFG
                     RAAREKHLATLKAERDETAEKHAERAFDVQKCQRLHQHLSQFIGTHLNLAFQENPEML
                     MQEIAAERAEIERELAQSAGNEQQLRHQLESVKAQLQMLNKILPLANLLADETLEARA
                     EECREQLELAEEDEMFIRQFGATLSQLEPIAAALKSDPALFEQLEADYRRSVAEQKVL
                     QQKVFSLADVMNRRLHFSYQETVGTEGSALTEQLRQRLENAQREREQARDQLRQAQAQ
                     LSQYNQVLTGLRSSYEAKNQMLQELIREIDDLGVRGDSGAEERARFRRDELQQRLSQQ
                     RSRKGYLDKQIAVIEAEMDNLNRTLRKAERDYHTQRELVVQAKASWCIVQRLSRNSDV
                     EKRLNRRELAYQSAEELRSISDKALGALRTAVADNEYLRDSLRASEDSRKPENKVAFF
                     IAVYQHLRERIRQDIIKTDDPIDAIEQMEIELSRLTNELTGREKKLAISAESVANILR
                     KTIQREQQRILQLNQGLQNIAFGQVKGVRLVVNIRDTHAILLNALSNNREEHKDLFDS
                     QKLSFSEALAMLYKRVNPHIEMGQRTPQTIGEELLDYRNYLDLEVETFRGADGWMRAE
                     SSALSTGEAIGTGMSILLMVVQSWEEEARRMRAKDILPARLLFLDEAARLDATSINTL
                     FELCERLDMQLLIAAPENISPERGTTYKLVRKITNNQEYVHVVGLKGFAK"
     gene            27553..27933
                     /locus_tag="PXF40_000337"
     CDS             27553..27933
                     /locus_tag="PXF40_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5801714.1"
                     /translation="METLAIFLFSEIWKFDFVFTFIFKILKINVFFSDLINMKLARKA
                     QRRLSFLRVFSLAFAAFIVNTTEFIPIALLSDIASSFQMEPSSAGIMMTVYAWVVFLL
                     SLPLMLLTANMERKRLLLMLFMGE"
     gene            27930..28631
                     /locus_tag="PXF40_000338"
     CDS             27930..28631
                     /locus_tag="PXF40_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5801715.1"
                     /translation="MIGQALGWRATFGIIGIIALIVLMMIWRLLPYLPSKNAGSIKSL
                     PLLFKRPMLIGIYLLVALIVSGHFTAYSYIEPFMIKISSVSVENTTFILLVFGLAGVV
                     ASFLFGRLYGKAPNKFILSGIAIIMCSQLCLLFLSDSTVAMFMVAFVWGIGITGMSIA
                     LQMKVLELAPDATDVATAIFSGTYNLGIGGGALLGSIAIQQLGLANIGFAGGSIAFVA
                     MVWFVFVSLKYRQLR"
     gene            complement(28698..30431)
                     /locus_tag="PXF40_000339"
     CDS             complement(28698..30431)
                     /locus_tag="PXF40_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3413 domain-containing protein"
                     /protein_id="HDL5801716.1"
                     /translation="MFARLRSLLPTNSRQYREETSQKITWGHWFALFNIVLALLISSR
                     YAFNADWPNTLVGKLYFFVSLFGHFSFVVFAGFLLILFPLSFIVKNHRTYRGLSVILA
                     TIGQTVLLVDTEVFKQFYLHLSPLVWDLLVNPEEGELTRKWQLLFVPMPLLLLAEMLY
                     SRWCWQKLRSFSRQKWGKYVALFFVISFTATHLIYAWADMNAYRPITAQRANYPLSYP
                     MTARNFLEKHGFIDRVEFNQEIEESGRLDTFYLNYPKSPLIATKTPSTNILLINLSGL
                     SKQIINAETMPKLTEISQQSHRFMQHYSSGDSASAGALGLFYSLSGKYLDSVLADKTV
                     SPLIEIARKSDYQLGLFSHNGFADPIYHQAIFSGILLPTAHSNVGAIGQWKNWISSRS
                     LENPFFSYLDLRMPFAHTAQEQAKLLDWQFAEIWQHLTQNALLANTLVIITADISNEV
                     GAENSFDKQHIQVPMMFYWQGESKEYHFLSSHLDIMPTLLSQFFGVQNPLNDYAQGMD
                     LSTQNQRLWVSSSNHKWNVAIMPNGDQYQIDRKGNFKHFNSNGEHEKDARPPLALFLQ
                     MIQQSNQFIEK"
     gene            complement(30436..30657)
                     /locus_tag="PXF40_000340"
     CDS             complement(30436..30657)
                     /locus_tag="PXF40_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1414 domain-containing protein"
                     /protein_id="HDL5801717.1"
                     /translation="MATKSKYHTKQFEQLLADLIATIEKHKAPVDLSLMALGNMITNI
                     LIENIQSPAQREALADAFADALKQSLKTK"
     gene            30896..31468
                     /locus_tag="PXF40_000341"
     CDS             30896..31468
                     /locus_tag="PXF40_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HDL5801718.1"
                     /translation="MSRRSEPKEEMVNRILSATESLIVQEGLQNLSMRSIAKEAGIAS
                     GTLYLYFKTKDDLLHSLAAQLLECYNGYMHFEFKPEMALFEQYKALVNKKWQFLIERL
                     DLVKQFQAVIGIDELIRETIADETSFWNKLILEGKKQRIIADLSNELLYGLSIGTLVD
                     IQYLQNLNQENQFDGYLDEIILRTWKAITF"
     gene            31499..32704
                     /locus_tag="PXF40_000342"
     CDS             31499..32704
                     /locus_tag="PXF40_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5801719.1"
                     /translation="MTTETQKLGKGRKFLIVLTLLIVLIVFAAIVGLQKIGAMKKAEA
                     AANMPEAVSEVTAMQVTTQEWTPTISAVGYIRPNQGAMLSAETSGVVSRVLVTSGQRV
                     KKGDLLVEFDSSVEIANLRASEAQLPNAKANLERYRNLIASNSASKAEFDNAQSTYNQ
                     LLANIEALRATIKRRQIYAPFSGLAGIVNVNVGQYITMGTEIVRVEDQSSMKVRFTLP
                     QTNLEQISIGQKVTAVIDALPAQTFPAKIVAIDPAVDRLTGLINVEAVIEEGQEKLLS
                     GMFARLNVALPTETGQIVVPQISIAYTMYGETVYVLQPLSDEDKEMVNKMAVQNPSLD
                     VNKMYRAKQMEVKTADRKGNYSQLSKGVKAGDLIVTGGLQRLSNNALVKVSDTEAVGI
                     TTPAKNSKL"
     gene            32718..35885
                     /locus_tag="PXF40_000343"
     CDS             32718..35885
                     /locus_tag="PXF40_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HDL5801720.1"
                     /translation="MKFTDIFIKRPVLAVCISLLITILGLQAIEKLQVREYPEMTVSI
                     VTVSVNYSGADARLMQTLVTSQLEEAVAQADNIDYMTSSSSPSTTTVTAKMKLNTDPN
                     AALSDISAKVNAVRSNLPSGIDDPSIRVSTGSNDALMYIRFVSDELNTSQVTDYINRV
                     VKPQFFTVNGVSSVDVYGSVFGLRIWLDPDKMASNNLSGAAVLSALSANNLQTAAGNS
                     NGYYTVYRNKVLSTTPSVTELEEVTVSTTKDGKTIKLKDIATVELDKYQDAARATVGG
                     KDAVVLAVSVAATANSLTVAKDIYPMFEQVLKNLPSTIQGDIVYDKTIAIDSSIKEVI
                     KTIGEATVIVLVVIILFLGSLRAMIVPVITIPISLIGVLFFLQMFGFSINLLTLLALV
                     LAIGLVVDDAIVVLENVERHVKEGKTPFDAAIIGTREIALPVISMTITLGAVYSPMAL
                     MTGVTGTLFKEFALTLAGAVFISGIAALTLSPMMSSRILKEHKEGEESAFARVVHRSL
                     DKMTSCYTNMLSGIMAVRGFVLFFAVLIFASLPMLFGSLSSEVAPTEDRGFVVGISNG
                     PSNTNLDYTEAALAQFNQEVTKLPEVSSLMTVSGFNGANSALSIIALKDWNDRSRERA
                     AISNDVAAIGKKVVGMDVNAIAFPEISTGENDLPFSLVITTADSYEKLAIVASEFLKK
                     AQTSGQFFFANLDLKFDTVTMNMKFDREKMGAYGVTMQQVSGTLGAFLSGAIITRVDI
                     DSRAYPIVSQAVRNDRLNPEDLMNYYVTTATGQSIPLGSFVTMELKTSPSSLPRMSQL
                     NSATIGGVVSGSIGDAVNWAKAELDRTLPSGYQYDFRGESRQFVQEGNAMAMTFALAV
                     IIIYLVLAIQFESWRDPLVILVSVPLAVSGALLVMNIPTAMKGLFMGIAAGTGSKDMM
                     AFANGIWTAGYTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLLHGKSRYEAIFHAA
                     TIRLRPIMMTTAAMIAGLIPLLFAVGAGAIARFSMGMVIVAGLAIGTLFTLFILPVIY
                     TFLGQEHKPLREFDEEKYFPTTKEA"
     gene            36113..37576
                     /gene="guaB"
                     /locus_tag="PXF40_000344"
     CDS             36113..37576
                     /gene="guaB"
                     /locus_tag="PXF40_000344"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HDL5801721.1"
                     /translation="MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIVSEPVTISP
                     DMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTRFVTDLSKTVREFMTPKDRLV
                     TVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKAESKPNACKDEFGRL
                     RVGAAVGAGPGNEERIDALVKAGVDVLLIDSSHGHSEGVLQRVRETRAKYPDLPIVAG
                     NIATAEGAIALADAGASAVKVGIGPGSICTTRIVTGVGVPQITAIAEAAAALKERGIP
                     VIADGGIRYSGDISKAIAAGASCVMVGSMFAGTEEAPGEIELYQGRAFKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRIAYKGYLKEIIHQQMGGLRSCMGLTGCATI
                     EELRTKAEFVRISGAGIKESHVHDVTITKEAPNYRMG"
     gene            37697..38368
                     /locus_tag="PXF40_000345"
     CDS             37697..38368
                     /locus_tag="PXF40_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family phosphatase"
                     /protein_id="HDL5801722.1"
                     /translation="MLQAIIFDMDGVIVDTEYLEFSLQKQFIEDIKEHSRPITLEQQS
                     EVVGKCLKEIPVIIKKLSESSLPIEEIRARYYAFFQDLFSKVDFKTIFRADIQQIIQF
                     AKQNQIKLAVASSSALSHIENILTVCGIKDEFDLIVSGEQFEHSKPDPTIYRYTCEKL
                     GVEPQNAVAIEDSYYGMLAAKTAGLTVIGYEEKRILIDQSLADYMGKDMKEILKILQK
                     CNTPS"
     gene            38490..38801
                     /locus_tag="PXF40_000346"
     CDS             38490..38801
                     /locus_tag="PXF40_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801723.1"
                     /translation="MKKLSLISIVALSACSIFGPSYSGETTASPLLKLDTERNINLYF
                     QAIHKCTPDKIHTKIINIPSEGNAKELWTATGCNKTQSFIITYRNDGVGGTFINMTTT
                     P"
     gene            38818..40389
                     /gene="guaA"
                     /locus_tag="PXF40_000347"
     CDS             38818..40389
                     /gene="guaA"
                     /locus_tag="PXF40_000347"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012510808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HDL5801724.1"
                     /translation="MTNIHHHKILILDFGSQYTQLIARRVREIGVYCELWAWDVTEEQ
                     IREFNPTGIILSGGPESTTEENSPRAPEYVFNAGLPVLGICYGMQTMAMQLGGLTETS
                     DHREFGYASVALKSADQLFANLNDDLTACEPKLDVWMSHGDKVTKLPPHFTITGVTPT
                     CPIAAMSDESRRFYGVQFHPEVTHTKQGLALLKNFVVGICGCETNWTAENIIEDAVKR
                     IREQVGDDEVILGLSGGVDSSVTALLLHRAIGKNLHCVFVDNGLLRLNEGDQVMEMFG
                     NKFGLNIVRVNAEDRFLEALKGLDEPEAKRKTIGKVFVDVFDDESKKLSSVKWLAQGT
                     IYPDVIESAASKTGKAHVIKSHHNVGGLPDYMKLGLVEPLRELFKDEVRKIGLALGLP
                     AEMLNRHPFPGPGLGVRVLGEIKKEYCDLLRKADAIFIEELHKAGWYYKVSQAFTVFL
                     PVKSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDLLGKISNRIINEVNGISRV
                     VYDVSGKPPATIEWE"
     gene            complement(40550..40945)
                     /locus_tag="PXF40_000348"
     CDS             complement(40550..40945)
                     /locus_tag="PXF40_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcB family protein"
                     /protein_id="HDL5801725.1"
                     /translation="MEQWTTDVWAAIMAAFIVGAVIGCTLVRVFNSSVRKQHELEKEL
                     KQTKTQVDEQKQKLEQHFEQSAQLLSSLASDYKKLYTHLAQSSEKLLPEASKNITFFQ
                     QTKLPIPAEKTEEDQPRDYSEGSSGLLKS"
BASE COUNT        12308 a         7613 c         9212 g        11963 t
ORIGIN      
        1 ggtttcttca ttaatgatta aatacaaaga gacagaataa tctgtccctt atgtattact
       61 gacatttagc tttgccaaga tcaacccaat cacctgtttg gactagtttt tttatatcga
      121 ttacgctaac caacacacct ttacctttaa atccgtggtc gtataaaact tggcaaacat
      181 attcggcgta gccatctctt ttcgtgccgt catcaaaaac tccaacctta aagataaatg
      241 gtgcagtcca agtcgcatct tttacctttg gctcttcatc actgataaaa atttgcttta
      301 ctttattacg agcaagttcg aggctatcgg cttgtacagg caatgcaaat agtgatagtg
      361 caagtagtgt aagtgctttt ttcatatcgg tttcccctat tgatttgatg tttaattctt
      421 ctatgtaatt gttagttttt agtttagatg attttggtat aaacatctat tgagaagtca
      481 aacctaatcc ggcacaacgc cagtttctaa catatataaa aattcttcat catcgatgat
      541 tttaattcct aacttttcag cttttgctag ttttgctggt ccaacagttt tcgactcttt
      601 atcgaaaatt aaaaaatcaa ctgcaccagt tacgttttgt actactctca aatcattatc
      661 tactgctagt tgaattaatt cattttttct agcttgctta aatccagtaa aacacaaacc
      721 gattttatag atcggtgtta ttttttcttt tcgttgctgg ttcagaagag aatcaaatag
      781 ataaaacaca tcttgaggaa tatttttggc ataattttcg gcaagagcta aatcatcaaa
      841 ttgtttaata atgcgatcag ctcttaatgt gataactcta tttttctgaa tacagtaacc
      901 tttgaagtaa aggtcatcaa tattcaaatt agaaatcgaa taaactccaa tttgtttatg
      961 tgatgtaata tagacaagat gagttagatt ttgatgttcc atcacctaaa ccctcctaat
     1021 atgcccttgc ataaattcca ctttaccgtg aatttggaat ttatgctcat tttctgatgt
     1081 gattctccac tctttataaa gcggattgtc ggaaatgact aacaattcat caccggcgaa
     1141 ctgcaagcgt tttacatata agttttcgcc atagctgaaa acatagacac catcgccttg
     1201 ataagcggat ttagtggtat ctacgaacag caaatcaccg ttaccgatag ttggctccat
     1261 tgagtcgcca tctacattaa taattgataa gcctttggca tttgcacgtt gaaagacttg
     1321 tgcaaaatag gcattttcaa attctactgc gtgcgtgtaa gcggttaagt ctcccgtgac
     1381 aaaactacca ttgccggcag aggcatatac atctaacacc tcaagtcgaa gcattgagct
     1441 ttcctcttca taagcggtcg gattttttcc gattttcgca aaatctggtg cttcgccttt
     1501 gccggttttg agccaattta catcgacatc taggacgttt gcaatttcat aaatccttgt
     1561 gggatttcga gtttgtccat tcaggatttt aaaaacagat ggctgtgaaa cacctatttg
     1621 ttctgcaaat ttttcctgtg ttaaaccttt ttggtctaaa acgattttca aacgacttgc
     1681 caaagtatcc attaggaact ccttattttt gatgagtata taactaaagg tatagaaata
     1741 aaaattcatt tggttattga ttttttattt ctttggttat attattataa ccattcaata
     1801 accagagtta tatttatgac taataagaaa attcagaaag ctattgaact tgtaggaaca
     1861 caaacaaaat tagctgaagc ttgtggagtt agtcagccta cggtcttgaa atggctaaac
     1921 ggaggcggaa tttccgctga atatctacta aaaatcgaag ctgccacaaa cgggcaggta
     1981 acaattcgtg aaatttgtga ggagttggga aatgcaacag caaaataaaa gccctgaaca
     2041 ggcagggcta gcgagtggga aatttactgt aagacgtaat caagacggta aatggcgttt
     2101 agatttgacc ttgttggatt ttggtattag ttcgccagaa acgactcaag ctcgttgcaa
     2161 attgcttcaa gagcttcagc ttgctcttct tcaaggtcaa ggtcatttaa atactgtcgg
     2221 cgtgaacgtt cgaaaagccg gtccagtcgt ttgcgttggt agtctgttaa gcgacctttt
     2281 aaatcatcaa gaataatgtt tttggcgttt agttgatggc gtaagttttc aacttcaaca
     2341 gtcagttcaa taatttgatc ttcagtattc ataaaatttc cttttggagg gttaaacaat
     2401 atctaaaaca taaccaaaat tcgactgctt gtctatgggg atagataagc cgaaatcaac
     2461 gtaaagaatg ttaatagagc cttggggaag gcgtagggga aataatgaat ttagaccaca
     2521 cctgtacaaa ttgcaaaagt aaaaatttac gggttcgtac atctgaaaaa atcggtttgc
     2581 tgactattca ggctgttact tattgtaata actgcggcac agagcaactt gtgcaaagtc
     2641 aaattatccg tgttcgcaca ccgatttata aagagcgacc ggaagcaatg cgtattaata
     2701 aatgcttgat ggaagccgat ttgaacacgc cggatttgtt cgatggcgtt gtggcagacc
     2761 aacctaagca agactaatcc caatttttaa acaatcgtca aaataagcct tatttgcata
     2821 gggcgagatt tttgcaccct aaattcagga atttgaacaa tgagtaagca attatattac
     2881 cgacacaaat cacgttggaa cagacttaac cgccttaaga agatgaataa acgtcgcctt
     2941 aatctgtttt tgcaagaaaa gcgggtggcg aatttagaaa gccggttagc tgatgaagta
     3001 gagctggcaa agctgaatag tgagcagatt ggcgatttac tgcaagcgtt ggagttaaaa
     3061 gtgaatcggt taattcgcca aaatgaaaag ctgaaagccc gtgtgattaa gctggaaaaa
     3121 gtcaaacaga cccaaaagca aggtttgttt gcaatgttta aaaaggtgtt gggtagcaag
     3181 ggtaatcctt agtaagaggt agatatggat ttcgtggcaa cgtatcaaaa gatacgcatt
     3241 aacactaatc acaagcaatt tacttgcaat cacttaggcg agatttgggg gaaggaaaac
     3301 gacgatttta aacgtttctt actacgagtc gcattcttgc aggataaccc cgagccgaaa
     3361 ccttggggag cgtattcccc acaagaaaaa cgccttttac atagttttag cttgtggtta
     3421 gagcagatag cagattttca gcgagtaatg aaaagagaat caaaactgcg tgaaaaacat
     3481 attaacgcac cggattagaa ggagtaaata tgagccgtaa ccgtgaattg tgtgagtttt
     3541 ttcacaaact gtggtgcaaa accggtaatc gctatgctta tcgccggtat caagtgtttt
     3601 ttcagcgtta tcaaaacgaa tgtttagtga atgagtagag ggtagaaaaa tgtcattaat
     3661 tactgtgaac gattacaaaa tcaagaaaga tattttagat gcagacggca agccgtgtta
     3721 tcagttgtat caaggcgaag agctattgcg tgataccacc aatttaagcg aaatcatcgc
     3781 ttatatgttt attcgtgccg aagataaacc gtttgatgag ttgtataacc atatcatcaa
     3841 ccaagaagca ggagctaaaa cagatattaa atttacggta acggtgagat gagccagatt
     3901 actaaatccg cttacacaca tattcaccca aactggcaag ccccgagagg taacacttac
     3961 cggattgagc gatatgagct aaaacggcgg tatgccttat tttgtaatgg tgagagggta
     4021 gttttatata aagacccaac acaccccaat aagaacgtag agagccatat agaaagtgat
     4081 gttttgttgt tatggctact gaaaaatgaa ttagggtgga gcggtaatat taaagagccg
     4141 ttaagccctc aagatgttga gaatatccgc ttgttagagc aagcattttg tttaacttat
     4201 aacggaactt tcattaaatg aattatcaga atgagattct atctgctaca gaggctttcg
     4261 caataggtgt ttcactccca cctgttgccg gtgcttctgc ttgtgcatta gagcttcatt
     4321 ctgatcgttt atatcaagcg ttcaaacagc cttacacttc aatggtccag caagaattat
     4381 tctcgaaaga ccctattcac gaaccgttac gccaatctta ttttgagcgt ttgcctcgtg
     4441 ccttagcaga gcatttcggc agacagtata agcaaaagct acattaccaa agccaatacg
     4501 acacagcaga ctggttcaaa gcggaaatgg cacgcaaaat gccacgcatt gaggcagtta
     4561 ttagccagta ttgcgatgta ttcgattttc tgaagcaatc ccatcaagat ttagattttt
     4621 tagctgaatt agatagtaat gtttatttcg gtgccggtgt tgatacgcaa caagcggtac
     4681 aaaaaattaa acaagatgcc gaagtgaaag gtattcaact gcctatgcac ctttgccgtt
     4741 tagagaatag ctctcgctat ttaaaagctc acggcattcg cccgcttgct taccaaaccg
     4801 aagagcaaat caaacagctt gccttaggta ttgcttatcg tgttcgccaa attcagcaag
     4861 ataacatcga gcagaatatg cacaaagcga cagatggcga cacagcctat agtgtgttgc
     4921 ttgaatgcta tcgggcaatg atgggagagg taaataagct caagattgat tcgccttatc
     4981 agaaaaaagc gagaaagggt agattaactg aagaggaaat taccacaggc tttttaaaaa
     5041 tgacctgtga aaaatggtgg actagaaagt tatctaaaat tgccgaacag atgaaagagc
     5101 atttagctat tgcgtgcggt atggtgaata tgctttcgcc ttactgttca aatgctcgct
     5161 tgaaagcgtt tgaggctcaa cgcaaggcga atattgatta tttgaaatca atgatcattg
     5221 ccaatatcgc cgagccggaa gagcaacttt cattatttga aacgtggttg aagtctgcct
     5281 ctaacccgaa aattaaacgc cttgaattac tcactcgtat gaatggattt gagcgttatg
     5341 cagataagca agggcacgag gggtggttta ttaccttgac tgctccgtct aagtatcacg
     5401 caatgctttc aagaaccagt agcgtgaacc cgaaatggaa tggagcaagc cctgcggaaa
     5461 cacaggttta ccttgtgaat acttgggcga aaatccgtgc caaactcaac cgtgagggcg
     5521 taatggctta cggttttcga gtggctgaac ctcacgctga cgctacccca cactggcatt
     5581 taattctatt cactcgtccg gaagatatgg aaaagcttcg ccgcgtgttc ttgagttatg
     5641 ccttagaggt cgatggcaca gaagccggtg cgaaaaaata ccgttgcaaa ttcaagcgta
     5701 ttgagaaaga gaaaggctcg gcaacgggct atttagtgaa atatgtttct aaaaacattg
     5761 acggttttgg aatggacggc gagctttcag acgaggcaaa tattcaggcg aaagagaatg
     5821 ccgctcgtgt aggagcgtgg tctagcgttt ggtgtattcg acagttccag cagttaggta
     5881 atattccgat cagcttatgg cgtgagttac gccgtttggg gagtgtagag caagaagatg
     5941 aaactttaga gaaactccgt gtgattgcag atagcggtga gtgggacgtt ttcaccgaag
     6001 aattaggcgg tgcgttggtt aaacgtgccg atttagttgc acgtattact tataccgaac
     6061 gcaaaagcga aaccggtgag gcgttatata cgatgtatca agagccatca ttaaaagtga
     6121 gcggcattat taacattaaa aacggtgtgc agattaatac acgcccgaaa gagtggagca
     6181 ttcaacttaa acctaaaaac tgggaggagc aacaattaca gaaaaaatta gaaaatgcaa
     6241 ccgaaacgga acgagcggag gttaaacgta aatactacga gaagttaggg tttaacgaag
     6301 aggctatcgc tttattaggg gagcttgctc ccccttggac ttgtgtcagt aactgtacgg
     6361 ggtcaaaaaa taatcagatt agtgaagagg ctcgaaattg cctaagaaat gaactgatta
     6421 caatgcgagg acgggttact gaacatcaaa tagacgattt actaaacggc aagcggttaa
     6481 aaatttgggg aaattcgcaa aaaacaatgt ttgtgagtta tagccgtggg cgtttaattg
     6541 agcatattgt tgataattat gagagttttt tgaattagga tattaagaaa atggttaaat
     6601 ttattcgttt aaatttgatt aattatttca ttgagaaaga tgaatatgga gaaccggtgc
     6661 gttgcagagc gtttcgttat gatgagatta ttcaaactaa gtttattgaa ggatttcgag
     6721 agggagagat accagctgat gattatggat ttgaagattg gaatggttcg gttctgattt
     6781 taaatgaaga aggacgtaaa tattttgaga actatctttt tgatgtaaag aagaattatt
     6841 gtagagcaag ggataactat gtatatgtct tggaaacttt agacgaaatt gaaatgaagt
     6901 taggattatt ggaggcgaaa taatgaactt agtcacatta gtcggacgtt tggggcaaga
     6961 ccctgatatt agaacaatgc aaaatggtga gaaagctgcg gctttatcgg tagcgacctc
     7021 tgaaaagtgg acagataagc aaacaggtgt gaagaaagaa agcaccgaat ggcatagggt
     7081 ggtgctttat cgccgattag ctgaaatcgc cgaattgtat gtaaaaaaag ggcatttggt
     7141 atcaattatc gggaaaatta aaacccgaaa atggacggat agcaacggtg ttgagcggag
     7201 tattacagag attattgccg agcagatgca aatgctcagt agtggtgaga aaaatacgcc
     7261 aaatacgcca aataaggcag aaaataaacc gcaaccaaag cagaaaaatc aagacgtgat
     7321 gactgcggac gagcagaaag atattccgca gtttgatgat gatattccgt tttagggggt
     7381 gaataatgag agaatgggaa aaacaaatgc catttagtgc aaatttacat ataagaccta
     7441 caggaaaatt tgaagtgaaa aatgtaaaca tagaacaaat aatcggagaa cgtggcaaaa
     7501 attacggcaa ctttgatgat gttgccacaa tgagccagca gttaaaagca gtgttgctgg
     7561 ataccaatac tcaacttaaa ccacatcaaa aagaggcagg cgagatgatc tgcttgaaac
     7621 tggctcgcat ttttgcaggt tgtaatccgg actatgaaga taactggcga gatattgcgg
     7681 gttatgcggt gctgggaggg aaattaaatg aaaaataaaa tggggagtaa atttatacga
     7741 gtcagagttg agcatccaca gcggaaaaaa gaagatattg agcttgtgca ggatgtggtt
     7801 gcttatcata tttttaatct ttttaaattt gaggaaagtg ggttacgggg gtttagtcag
     7861 tatgatttgg aaattgatgt gaaagttaag ccagtgttag aacaaaaaga aatgcctgta
     7921 gatgtttgga ttgatgattt aggtggtaaa aatggaacaa ttacaagcgg tcagtaatga
     7981 gcaagttttt gcaaaacttt gtgaggttga gcggttatta aaaaccaaag gggtgaatga
     8041 gcatagccgt gaattgtggg atttgggcga tgtagcagca tatttcggct acactaaaga
     8101 acacaccagc cgaagtgttg tatctagtcc acattttccg aaaccgattg cccttgacgg
     8161 cttacgaggc aagggcaggg gggcgaagaa gtgggtatcc ggtgaagtgg tgaaattttg
     8221 tttgatgtgg aaggtgaagt gatgataaaa aagataattt tagatgcttg ttgcggtagc
     8281 cgaatgtttc actttaataa gcacaacccc tcggtattgt ttgctgacaa tcgggaatcc
     8341 ctgtatcgaa aattttaaat gttatcgaat accaacctat ctatgggcat aaaagcggta
     8401 aacataacaa aacgcattgg ctggcatttg taaagatgga taataacgat tatttgtaaa
     8461 gtatttcaaa atacaaaagc cgataaattt cattatttat cggcttttgt tttatgggtt
     8521 gttttgcttg aattgttgaa tagcttgaat aatcagctgg ttttgtggaa tgttgagttt
     8581 ttggctaagt acttcgattt ctgcgatcac ctcaagcggt agtttaaagg atttttgctt
     8641 tattcctcgt tttgcctcgc ttttagcttg gatttcattt cttgacattg ccataattta
     8701 tccctattat aaattttgtt gaagagctgg gagctttcac ccccagcgag ttgcttcaga
     8761 ttagtaagct ggggagctaa ggactaataa gaagacaact aggataatgt atttaaacat
     8821 tgtgctatcc ttcttcattt cgtaaggttt aagccttacg ctcactttca agctgtctct
     8881 tgaaagtgag gttattataa tgtagggtat cctacattgc aagtaataaa tacaaaaaag
     8941 ccgataaatt ttcgtttatc ggcttttgtt tttattgcag tttgctcaca agttctgaaa
     9001 tatccgggtt atagtaggta ttttgcaaaa tacttaaatc tcgatgcccc gatactttgg
     9061 caagctccat taccgtcaga tatttagaca aacgtgtgag tgcctctcgc cgtgtgtcgt
     9121 gaaaatgcag atcggcattg tgtagattgg ctttttgttt cagcttgcga aaattcgaat
     9181 caaggctgcg actggtgagc tggaaaacac tgttttgctt gttcggttca agttgtgcca
     9241 actgatttaa aattgctatt gctttggttg agagtggcac ggtgcgtgaa taaccgtttt
     9301 tggtttgtgg caaaaatgcg gtgcgtgcct gcaggtttat atgttcccat tttaaaccag
     9361 caatttcacc cgctcgcatt gcagtctcaa tcgcaaataa tagtgctgct ccggctcttt
     9421 gttgcattaa tagcggtggc tggttagggc tgtagccgga gacaaaaatc agtttgtcta
     9481 tctcctcatc gctatatcgg cgagttcttg ctggtggcgt tttgattttt tccagcgttt
     9541 ttagaggatt ttctttgaga taatcccatt ccattgcttt tgtaaagagt gccgataaag
     9601 tggctctttc tcttgagacg gaaaccggct gcacttcttg caagcgttgg ttttgccatt
     9661 ggcgtaaatg ctctttggtg agtgccggta atggtatatt tcccaagttg ctgccggcaa
     9721 ttcttagcag gcgatagcgt tcttcccttt tgccacgttt ggtcggagtg acctctttga
     9781 ggtatttgtc gattaattcg gcaaaaagaa tgttcggggt ggtgttatat tctccggcat
     9841 caatttgagc ctctaaagcg taagcccagc ggtttgcctc tgttttggtg ctgaaagtgg
     9901 cagttttata aatgcctttt ttgcggactt gtgctcggta tttgttgccg ttcttaataa
     9961 tagtagccat ttttttattc ctttgtgtat gtgtgcagtt taagtgtgca aatgtgtgca
    10021 aaggaatgtt aatagagatc ataaacgatc aataaatatc aagttttcat atcaaaaatg
    10081 atgtttttat tgatgttatg ctacacttgg ggaagtgttt taaatcaata agctattgat
    10141 ttataagggg tatttttggg gttaagcctg aatggggata ttcaggctta aaaataatgg
    10201 tgcgactagc tggactcgaa ccagtgaccc ccaccatgtc aaggtggtgc tctaaccaac
    10261 tgagctatag tcgcattaac ggtgtgcatt ctattggaaa aaggaactta gtgcaatatg
    10321 cttttggtcg aatgctttta ttttagacgc ttttgggtaa aaatttgttt atcttcccaa
    10381 cggagcatgg ttaaatggct tccccaagca cagccggtat caagtgcata gatgtttgga
    10441 cgagtgcatt tgcccattag gcttgcccag tgaccaaaga taatgttttt ctgtgtaaat
    10501 aacggattat ctaagtcaaa ccaagccagc agttcttgag gggcttgttc aagcggtaat
    10561 ttacagtcaa aatctaaccg cttgtcggtg tagcaaaacc gcatacgggt aaacacattg
    10621 atgatataac gccaacgttc aacaccttgc aaatcttcac tccagcgttc gggcttattc
    10681 tcatacattt gggcgatgta gtccgcataa ttgtcacttt gtagcacctt ttctgcctct
    10741 ttggcacaag ctagggtagt tgctaaatcc cactcagggc tgattcctgc gtgagtcagc
    10801 aaaaattgat gtttggggtg atgaattaca agcggttgat ttctgagcca attttgcaaa
    10861 tcgagccgat ctttagcctc aaaaatagca tcaatcttat catttggttt tacccgtttg
    10921 atgccaagca agtgcaaatc gtggttgcct agcacggttt tggcattgtt tgcagagtct
    10981 ttcacaaaac gtaaacaggc taaagagtcc tcaccacggg cgactaaatc ccctgttaaa
    11041 aagagttcgt cttgcttggg gttataattg actttttcta ataaaagctg aaattcgtta
    11101 aagcaaccgt gtaggtcgcc tacaatataa gttgccattg tttctccttt gttcccctaa
    11161 agttataaac aagcggttat attttagaga aaatttgcaa aatctcatca aaatataacc
    11221 gcttgaaatt taaatgatat ttcctacgat tgagcgggtt tctaagcgta cttcggtgag
    11281 tttcactttc accgcttgcc cgatctgata ggctttttca cctttaatat aaagtgcaag
    11341 ttcttcttgg cggtattcca tttcctcttt gttgtcgtgc aagctggaga atggcacaaa
    11401 aatttgagca ccgtttttta tgactttcgc acgcaagcca ccacgggaaa catctgcaat
    11461 ttcgcactca aattcgaccg cttgttccac cattggggca aggtaacgag cataaagcca
    11521 gtcagcaata tcacgttcta ctaaacggtt ttgacggcga gcttcttgta aacggcttaa
    11581 aactgattct tccaccgctt ggctttgttt gccaagtaac acttgcttga ttaaacggtg
    11641 gtttaccata tcgccatatt tacggatggg tgatgtccaa gtggcgtaat cggtaatgcc
    11701 tagtccgaaa tgcggggcaa cttcggcttt aaattcagcg aaggttaaat aacgtcgtaa
    11761 acgcaactct aagaatttct ctgggtagtc ttgaatatca cgttgcattt ggcaatagcc
    11821 ttctaaggtt gctaaacgct cggcggagta gcgttcggca agctcatcac gattttcatc
    11881 gctggctaaa gtttggagta aaaatgattt taccaattca taatttttcg gatcaaaacc
    11941 tgaatgggta ttaaatacac cggttttggc atgttggctt aagaattttg cacaacaaat
    12001 attggcaaga atcattgatt cttcgatcat ttgattcgca atacggcgat attcaacgtg
    12061 aatatctttt accgagccat cttcatttaa ctcaaaggta taatcgcctt gttctttgaa
    12121 tagcaacgca ttctcggcac gccattgaat gcgggcttga gtaaattgat gtagccactc
    12181 aatttgttgt tttgtttctt cagactgagg ttgccacgca ttttccacgc cttcgagata
    12241 atcggaaaca tcgtcgtaag ccaagcgatc ttttgattcg acccaagcag aggtaaaggt
    12301 tgtctcttta atgagattgc cgtttaaatc ggtttcaata aagccaacga gggcagggcg
    12361 tttttcattc gggacaagcg aacagagatc gtctgagagt tctcgaggta acattggaat
    12421 gttaaagccc ggcaaatagt tggtgaaaca acgctggcga gcggcttttt caatatggga
    12481 attttctggg atataagcgg ttgggtcagc aatcgctacc actaaacgcc agccggttcg
    12541 cttgccattt tgcttaattg gttcgatgaa cagagcatcg tccatatctt gcgtgcttgg
    12601 gctgtcaata gtggtaaagt aaagatgaga taaatcttca cgagctaatt catcgtgtaa
    12661 ttcatagttt ttttcatttg cgaccggttc acgaggctgt tcgtggcggg caagtgtgac
    12721 ccaccaaggg gcaaaattat cagattcttt acagataaat tgggtaactt gagcaaagaa
    12781 aaaacggtcg tcacgcaatg ggtgcgtttt taattgtgca accacccagt cgccattttc
    12841 taatttttca gtggcttttt tatgggtatt tgccgggata gtttgcttaa tgcttgggtg
    12901 atcaaccgca agttgcaatt tgccctcttt attcaagcga acttgggcaa taaatctatc
    12961 cagcattggc tcaagtagtg aatcaatttc tacctgttct ttgtcgccat cacgtttgac
    13021 tacggctttc actgaatcac cgtgcattac ttttttcatt tccgcaggtg gaataaaata
    13081 gcttttttta tcgcattcta aaaaaccgaa tgctttgtct gaggctttga caacgcctgc
    13141 gacatattct ttgcttgctt caatttgttg tttgagttgg gctaaaaggg gattgttttg
    13201 aaacataatt tctcatttta aaaataaaaa aaggtgctat cgttgcaccg aaaaaaacaa
    13261 tggcattata acggatttga accaagttca gcaaataaat gctgttgcta taacttataa
    13321 aggttggtag aatataatcc atttaaaaat aatggagact tttcaatgaa aaaattactt
    13381 gcaattgcaa cagtattttc tttagcagcc tgttctactc aaacacttga actatctcct
    13441 gctaaggaag ctcaatatga tcgtgttcaa cacttctttg tttcagggct tgctcaaaaa
    13501 caagagatag atgcagcaaa aatttgtaat ggtgcagata aggtaggtaa ggtagaaact
    13561 gaaactactt tctttaatgg cttgttaggt acaattactt atggtatcta ttcacctcgc
    13621 caaatccgtg tatattgtaa ctaatcctag taatttaagg agttgaaaat gaaaaaattg
    13681 cttgctatgt ctgtattaac agccctgctg actacagcat gtacaacaca aactgcccat
    13741 attggcggca aagttactga taatattaaa ccaactaaga gtgtaactca gtcgttcttt
    13801 ataggtggga ttgggcaaga agaaacattg aatgttgtag aggtttgtgg ttccaaagat
    13861 aaagtgcagc aggttgaaac agtactttca ggtggggaca ttctattagg tcttgtgact
    13921 atcggtattt atacacctcg tactgcaaat gtatattgta agtaatattt tattaaaaaa
    13981 ataacggact caattgagtc cgttattttt ataggaatta ctcttcgtcg cctaattcac
    14041 ccattgccat tacgctgaag ccggcatcaa cgtgtaacac ttcacctgtt acaccagagg
    14101 ctaaatctga gcataagaaa gctgcagagt tacctacatc atcaatagtt acggtgcggc
    14161 gtaaagcagc ggttttctcg aaagcagaaa gcattttctt gaagttttta atgcctgaag
    14221 cagctaatgt acggatcggg ccggctgaaa tcgcatttac acgaatacct tctttaccta
    14281 aatcggctgc cattacacgg gttgcagctt ctaaagaggc tttggctaag cacattacat
    14341 tgtagttggg gattgcacgc tctgcaccta agtaacttaa ggttaaaagg gcggcatttt
    14401 catttaagaa ggggcgagca gcttgagcca ttgcaacaaa gctataggca ctgatgtcgt
    14461 gtgcaatacg ataaccttca cgggttgcgg catttacata atcgccgtct aattgatcgc
    14521 ccggtgcaaa tgcgatagcg tgaacaaaac cgtcaaattt ttcccaatgt ttgcttaatt
    14581 cagtaaagca ctcagtaatg ctttcatcgg ttgctacatc taacggaagg acaatgtctg
    14641 agccaaattc tttggcaaat tcttcaactc gtggttttaa tttatcgttt aagtaggtga
    14701 atgcaagttc tgcaccttgt tgcttcattg cgtttgcaat accgtaagcg atcgaacggt
    14761 tgcttgctaa acctgtcact aaaatacgtt taccagttaa gatacccata aaaattcctc
    14821 ttttatattg attggggcaa aattgtgtcg attataacgg atataggaaa aacgggcaaa
    14881 tggagttagc ggctcatcgg atcagaaatc cctttttgaa cgaggtttca aaaagggatt
    14941 tggtaagata aattaagcgg tagtttgagc aataatattt tgctgcggtt tgattgcccc
    15001 ggctaattcg gctaattctt ccatacggtt aataataata tattttcctt gtactgaaat
    15061 cataccgctt ttttggaaac gccctaataa acggctgata gtttcaatgg ttaaaccaag
    15121 ataattgccg atatctccac gggtcatagt tagacggaac tcttttgcag agaaaccacg
    15181 ggctgagtaa cgttgggaaa gattatacaa aaatgcagct agtttttctt ccgcattcat
    15241 ttttgagagc aatagaatca tttcttgatc gcttttaatt tcattactca tcaaacgcat
    15301 aatttgatgg cgaatttttg gcattttgcc ggcaagatca tctaaaatat cgaatggaat
    15361 ctcacaaatc attgaggttt cgagtgcttg agcatagcct tcgtgctgca tattggtaat
    15421 tgcatcaaag ccaattagat cgccaggtaa atggaaaccg gtaatttgct cttcaccact
    15481 ttcacttaag gtataggctt ttaatgttcc agaacggata gcataaagcg aacgcagttc
    15541 atcacctaac ttaaaaataa cttgcgattt ttgaatcggt tttttacgct caataatatt
    15601 atctagttga gttaattccg tttcattaag agtaaaaggt aagcatagtt ggctaatact
    15661 gcaattttga caatgaattg tgcaagtatg acgtccgctt gttttaggtt ctgatacaat
    15721 tttcatccat tcaaccttaa attagaaaag tattcctaaa tttgatttag aacaaagttt
    15781 accattaaat ttacatgaag caaagtatac caaggaaaaa taaaaatact tacaaagagg
    15841 tatgaaaaat ataatcaaat ttttattttt gagatctact tcaagttttt atcaaaaaga
    15901 gtgtgttagt atgtttatac acaaagtaaa caactctcac aagcaaggag catattatgt
    15961 ataaacatat cttagttgca gtggatcttt ctgaagaaag tcttgtttta gtgcgtaagg
    16021 gggctgcgtt agcagaaaaa tgcggagcta aactttccct cattcacgtt gatgttaatt
    16081 tttcggatct ctatacagga ttaattgata ttaatatgtc ttcggtacaa tacagtgttg
    16141 ttgaagaaac aaatacggca ctggctgaac ttgcctcaaa agtaaattat cctgtatctg
    16201 aatgtttaaa cggaacggga gattttagtc aagttttgga agaggccgta gaaaaacaca
    16261 atgtcgattt actcatcact ggccatcatc aggacttctg gagtaaattt atgtcttcaa
    16321 ctcgtcgagt catgaataat atcactgttg atatgctggt tgtgccatta gcagatgaat
    16381 agcaagaaag tgaatgaaaa ataaccgctt gagacagttt atctgtctta caagcggtta
    16441 tttttttggg aaaatttaca aaaattattt aattgaaaaa ataagtagca tatagctccc
    16501 ccaatagcat aaaaaatgtg taaaatagca agataactaa atgtttaact tctatttaca
    16561 aaaagagtga tttttaatga aaacaacttc agatatcaga caatcttttc tagagttttt
    16621 ccaaactaaa ggacatacga ttgttccaag cagctctctt gttcccgaga atgatccgac
    16681 attattattt accaatgcgg gcatgaacca attcaaagat gtttttcttg ggttagaaaa
    16741 acgcccttat agcagagcga ctacggcaca acgttgtgta cgtgcaggtg gtaaacacaa
    16801 tgatttagaa aacgtaggtt ataccgctcg ccatcatact ttttttgaaa tgatggggaa
    16861 tttcagcttt ggtgattact tcaagcaaga tgcaatcaaa ttcggttggg agtttttaac
    16921 ttctccacaa tggcttggct taccaaaaga aaaattatat gtaactgtgt atgaaactga
    16981 tgatgaagcc tacgatattt ggcataaaga agtaggtgta ccatcggaac atattattcg
    17041 cattggcgat aataaaggcg caccttatgc ttcagataac ttctgggcga tgggcgatac
    17101 cggcccttgt ggcccttgta ccgagatttt ctatgatcac gggcctgaac attggggtgg
    17161 cttaccgggt agcccagaag aagatggcga ccgctatatt gaggtatgga atattgtatt
    17221 tatgcagttc aatcgtttag cagacggtac gatggaaaaa ctgcctaagc cttctgtaga
    17281 tacagggatg gggttagaac gtatgactgc ggtaatgcaa cacgtaaact ccaactacga
    17341 aacggatatt ttccaaactt taattaaaga agtcgctact ttgcttaatg tgaaagattt
    17401 agataataaa tctttacgtg tagtggcaga ccatattcgt gcttgttcct atctgattgc
    17461 cgatggtgtt ttaccttcaa atgaaggaag aggctatgta ttacgccgta ttatccgccg
    17521 ggcggttcgt cacggtaata ttttgggtgc aaaagaagcc tttttctata aattggtgcc
    17581 aacacttgca acggtaatgg ggcaagctgg tgaggtgctg acccaaaaac aagcgcatat
    17641 tcaaaagaca ctcaaagcag aagaagagca atttgcccgt actcttgagc gtggattgaa
    17701 tttattagaa gaagcattag cgaaggttga aaataacacc ttatctggcg aagttgcgtt
    17761 caaactttat gatacttatg gcttcccgtt agatttaacc gcagatgttt gccgtgaacg
    17821 tgatattaaa attgacgaag acggcttcaa tgcagaaatg accgcacaac gtgagcgtgc
    17881 gaaagccagc agtagctttg gcacagatta taacaatgtg attaaagtgg acagtaaaac
    17941 atgctttagt ggatatactg aaaccagctt aaatgatgct actgtaattg ggttatttag
    18001 taatggaaaa tcggttgagt ctattcaatc gggtgaaaat gcggtagtga ttttagataa
    18061 aaccccattc tatgcagaaa tgggcggaca agtgggagat agcggtcaaa tttccgcaga
    18121 aatttgcaat tttgaggtag tagatacgca aaaatatggt caagtattcg ggcatattgg
    18181 gcaattaact tccggctcac tttctgttgg cgacaaagtt aatacgatcg tagatagaga
    18241 gcgtcgtcat gctattacat taaaccacag tgctacccac ttactgcatt ctgcgttacg
    18301 ccaagtgcta ggcgaccacg ttgctcaaaa aggctcatta gtgtcagaaa atattttacg
    18361 ttttgatatt tctcagccgg aagcaattac taaatcacaa cttgaagaag ttgaacgtat
    18421 cgtgaatgct aaagtgcgtg aaaatattca ggtaatcatt gaagaaatgg atattgaatc
    18481 tgcaaaagcg aaaggtgcaa tggcgttatt tggtgaaaaa tatggcgaag tagtgcgtgt
    18541 agtggaaatg tcagatttct cgattgaact ttgtggcggc acacacgtta aacaaaccgg
    18601 tgatattggc ttattcaaaa ttacctctga aggtgcggta gcagcaggtg tacgccgtat
    18661 agaggctgtc actggtgaaa atgcgattgc ttggttgcat accttacaac aagccgttca
    18721 acaaagtgct gaattgttaa aagcagacag tcattcattc gttgagaaaa ttgttcaatt
    18781 acaagagaag gctaaacgta cagaaaaaga gcttcaacag ctaaaagata aacttgcagc
    18841 acaagcaggt tcagatttag ccaaacaagc tacccaaatc aatggcgtga atgtagtgat
    18901 tcaacaatta gagaatgttg aaccaaaagc attgagaacg atggttgatg acctaaaaaa
    18961 tcaattaggc agtgcagttg ttgtatttgc gactacggcg gaagataaag tcaatttgat
    19021 tgtaggtgtg accaaagatt taaccgataa agtcaatgct ggtcaattag ttggtgcaat
    19081 ggctgaaaaa gtgggaggta aagggggcgg acgtcctgat atggcaatgg ccggaggctc
    19141 agaaccacaa catttattgc aagcattgtc acttgctcaa gaatggatta cagcaaaact
    19201 ttaaaaataa taacaaggcg agctgaactc gcctttaaaa ctttactcta tatttaagta
    19261 tttatagagt ttttcacttt ttaggagaca attatgctta ttctaactcg taagattggg
    19321 gaagttttac tcgtaggaga tgatgttgag attacggtac tcagcatccg aggaaatcaa
    19381 gttaaattag gtgtgaatgc accaaaagaa atctctgtac accgccgaga gatttatgaa
    19441 agaataaaag cctcagtaga agaggaaaat gcggaataag cattttaact gtaaagctgc
    19501 tagatgataa cagcgaagca ggcaatgcaa aattttctga aaattgaccg cctgttatgt
    19561 ctaagcggtt tatttcagtt atatctaata tgttaagtca tcaaaggatt ccaaatgaaa
    19621 gtcattattc ctgttgctgg attgggaacg cgcatgttac ccgcaaccaa agctattcca
    19681 aaagaaatgc ttatccttgc agataaacct cttattcaat acattgtaaa tgaatgtgtg
    19741 gctgcaggtt ttaaagaaat tgtattggtt actcactctt caaagaatgc tatcgaaaac
    19801 cattttgata cctcttttga attggaaacg atgctggaga aacgagtaaa acgtcaatta
    19861 ttagatgatg tacgttctat tgtaccaaaa gatgttacct taattcacgt tcgccaaggg
    19921 caagccaaag gtttaggtca tgcggttcta tgtggacgaa cagtggttgg cgatgaaccg
    19981 tttgcggttg tattaccaga tgtattactt ggtgaattta cagcaaacca aaaaacggaa
    20041 aatttagctg cgatggtgaa gcgtttccaa gaaaccggat atagccaaat tatggttgcg
    20101 ccggttccaa tggaaaatgt aagtagctat ggggttgctg actgccatgg tgtagatatc
    20161 cctctcgggg gggcagcgcc tattgcgaaa atggttgaaa aaccaagtat tgaagaggcg
    20221 ccttctaatt tagcggtagt aggacgttat gtattttcct caaatatttg gaatttatta
    20281 gaaaaaacgc cagtaggcgt aggtgatgaa atccagctga cggatgcaat tgatatgttg
    20341 attcaccaag aaacggttga agcttttcat atgacagggc gctcatttga ttgtggttat
    20401 aaagtcggct atatgaaagc atttgtagaa tatagtttaa atcatgacaa atgcggaaaa
    20461 gaatttaaag catttattaa agagttagct aaatcactct aagccttaga gtttagacta
    20521 tgatctaagg ggctgtgtct gatattctat tggatccagt cttttctatt tatggtatca
    20581 taaattagcg tagtgataat aaattttcgg attcatttac ctttaaaata ctttttgcaa
    20641 aaaatcaccc atatttgacc gcttatattg ttcatttctc ttgtctgcgt tttatccatt
    20701 cccattttga ttacattcag ttacaataaa taccattttt gtatagaaat taaagattaa
    20761 gcccgtatgc agaacgaatt ggcacagact attccagaac tcatctcttg gacgaaagat
    20821 cgtgaatttt cactttcgct ttcttccgac cgcttagcgt ttctacttgc tatctctatt
    20881 tataaccaag aacagacaga tggtgaattg ttagaaagtg atcttattga tcttttccgt
    20941 tatgtttcaa attcgtttga gcaatctgat gccactttta cccagcgtgc caataatgcg
    21001 attaatgatt tagtcagaca acggttgtta aaccgtttta gtagcgaatt tacggaaggt
    21061 ttggcgattt atcgtgttac gccgttaggg gtgggaattt caaattatta cgttcgccag
    21121 cgggaatttt ctaccctgcg tttatcgatt caactttcga ttgtggcaga tgaaattcag
    21181 cgagcttcag tagcagcgga agagggaata gagcaggcac aagatgaacg tttttggcga
    21241 aataatgtgt ttgccccatt gaaatattcg gtggcggaaa tctttgacag catcgatctt
    21301 tcacaacgga ttatggacga aaatcagcac caaatccgtg aacgaatagc cgaactgctt
    21361 agccaaaact ggcacgaagc aattatgagt tgtgagcaat tgttagacga aacctcgggg
    21421 aatttgcgtg agttgcaaga taccttaaat gccgctggtg ataaactgca agctcaatta
    21481 ttgcggattc aaagttgcct gatggctcgt aatgatttgg attttatcga tcagctgatt
    21541 gtgaatctac aaaataagtt agaccgtatt atcagctggg gacaacaagc tatcgatctt
    21601 tggatcggct atgaccgcca tgtgcataaa tttattcgta cagcgattga tatggacaaa
    21661 aaccgtgtat tcgggcaacg gttacgccaa tcgattcaag attattacaa cagcccttgg
    21721 ttgctttata ctgcaaaagc cgattcgtta ctggacttgc gtgatgatga agcaatgtta
    21781 aatgaggcag aatcggtggg cgagttgcca agtgagttag agtatgagtc gctttcagat
    21841 gtgcaagagc aaattgtttc ggcaatgcaa gctcatttag cgccgttccg tgctgaaggt
    21901 aaaccgatag atttaggcgt tatcttgcgt gaacagcttg cccgattccc ggaatcccgc
    21961 cattttgacg tggctcgtat tattgtcgat caagctgtta agttaggtat ggcaagccaa
    22021 gatagccaag ccgtttaccc acaatggcag ccgattaacg agcaaggggc ggaagtgcag
    22081 gcgaatgtta tcgaccaata caataaataa caagcggtcg tttttaccca gaattttgca
    22141 aaattgaaga gaatgacaat gacagagaat atccaagatt tcatttcccc gaaactggca
    22201 cttgcgattg ccaacccgat ttttccggag ctagacagcc aattacgagc cggtcgccat
    22261 atcaataccg agcagcttga ccaacacgtc tttttgatgg attttcaagc ggaactagag
    22321 agtttttacc gccgttatca cgttgagttg attcgagcac cggaaggctt tttctaccta
    22381 cgcccgaaag cctcgacact aattgcccgt tcggcaatgt cagaaatgga aatgttagtg
    22441 ggtaaggtgt tgtgctacct ctatttaagt ccggaacgtt tggctcagca ggggattttc
    22501 agccaagatg atgtgtatga agaattactc agtcttgccg atgaaagcaa attattaaaa
    22561 gcggtaaacc cacgttcgac cggttccgat ttagaccgtg ccaagctggc agaaaaagcc
    22621 ggcggagcgt tacgcagatt agcccgtatc ggcattatta cccgagtagg cgagcaaaac
    22681 agcaaaaaat ttgtgatttc agaatcggtc ttccgttttg gggctgatgt gcgtaccggt
    22741 gatgacccaa gagaggcaca gcttcgctta attcgtgatg gtgaagcgac aacccctgcg
    22801 ttgttaaacg aacaagcggt tgaaatagat gaaaatattg cagatgaagc cccctttgac
    22861 ggagaaaatg agtgatttca ttcgaataga ttcagcattt aatgagtctg ccctagacac
    22921 ggtaaagccg aactaggtta agcataaagc agccctccaa ggctgaggtt gcgattagag
    22981 tagcggagct actcacctat acctaaccta gtacgcttta gcgtgctagg acaattagtg
    23041 agaaaacata atgattgata ccacagaatt gcaaaataat cctcaaattg caccgcttgc
    23101 acgcccgaat gatgtacaac gcggtaaatt tctctcttta acgctgatta actggaacgg
    23161 tttttttgct cgaacctttg atttagatga cttagtgacc acgctttcag gcggtaacgg
    23221 ggcaggtaag tccaccacaa tggcagggtt tgtgaccgcc ttgatcccag atttaacctt
    23281 gcttaatttc cgtaatacga ctgaagcagg ctcaaccgcc ggttctcgtg ataaaggctt
    23341 atacggtaag ttaaaagcgg gtgtttgcta tgcggtgtta gagtcattca attcccgtgg
    23401 gcaacggatt attaccggcg tgcgtttgca acaaattgtc ggacgggata aaaaagtcga
    23461 tattcgttcg ttctcgctcc agaatattcc tcaagagcaa agcattatca gcctactgac
    23521 cgaacaagtg gggaataagg ctcgagtgct ggcgttaaat gaactcaaag atcaatttga
    23581 gaacagcgaa gtccaattca aacagtacca ttcgattact gattaccaca gttttatgtt
    23641 cgatttgggc gtaatcccaa aacgccttcg ttcggcagcc gaccgtagca aattctacaa
    23701 attaatcgaa gcctcgcttt atggtggtat ttcaagtgtg attaccaaat ccttgcgtga
    23761 ttacttgttg ccggaaaata cgggcgttcg ccaagcgttc caagatatgg aatccgctct
    23821 gcgtgaaaac cgtatgacct tagaggcgat taaggtcacg caatcggatc gggatatgtt
    23881 caaacgctta attaccgaat cgaccaatta tgtgtcggcg gattatatgc gtaatgcgaa
    23941 tgaacgccgt ggcaatgtac aacaagcctt agagcaacgc aaagagtggt atgcggcaaa
    24001 atccaaaatt ttgctcgaac agcaacgctt tgtggaattt agccgtgaaa gtgcggatat
    24061 tgccgaagca gagctggcgt tagaggcgga ttacaatagt gcgaacgatc atctaaattt
    24121 agtgatgaat gcgttacgcc accaagagaa aatcgaacgc taccaagacg aagttgaaga
    24181 gctgaatatt aagctggaag aacagcaaga ggcattggaa gaaattgcgg aaattgccga
    24241 aaatgctcag gctcgtgcgg atgaggcaga tgatcacgtt gaagaattgc gttctcaaat
    24301 ggcggattac caacaagcct tagatgcaca gcaaactcgt gcattgcaat accaacaagc
    24361 ggtgaatgcg ttagaaaaag ccaaacagct aaccggctta gtgaatttag atttaaataa
    24421 tattgaagat taccacgcag aatttgtggc tcaagccgaa gatcttaccg atcaagtatt
    24481 tgagctggaa caacgtttaa gcgtgtcgga tatggcgaaa acccaatttg aaaaagcgtt
    24541 tgaattggtt tgcaaaattt ccggtgaaat tgaccgcttg caagcgtggg aagaggctcg
    24601 tgcgttactt tctgccttcc ctgagcaaaa aatgcaagct cagcaagcgg tgagtttacg
    24661 tcaaaaactc aacgatttag aacagcgttt gcaacaacag caaaatgccc agcgtttagt
    24721 ggcggaattt aaccaaaaat cgcaacaaca actcaattca gcggaagaat tagacgccta
    24781 ttttgaagag cagcaagctc gcctagaaga tttagaggca gagctttcgg actttgtaga
    24841 acaacgttca acccaacgcc aacaacgtga acagcttaat caacaatatc agcaattagc
    24901 gaagaatgca ccggcttggc atacggcaca atcggctctg actcgtttag aagagcaatg
    24961 tggcgagaag tttgaagcca gccaatcagt gatgcagttt atgcaaaata tgctgagcaa
    25021 agagcgtgaa gccacccttg ctcgtgatga attggctcgt aaagaacaaa tgcttgatga
    25081 gcaaattaat cgcttaagcc agccggacgg ctcggaagac gcccgcttaa accagttggc
    25141 agaacgtttt ggtggagtgt tactctctga gttatatgat gatgtatcaa ttgaagatgc
    25201 gccttatttc tccgccttat acggcgaggc tcgccacgct attgtagtgc gtgatttaga
    25261 ggcggttaaa acacagctag agaaattaga cgattgccca agtgatcttt atttaattga
    25321 aggtgatccg tccgcctttg acgatgcggt atttagtgcc gaggaattag gcgaaggcgt
    25381 ggtggtgaaa gtctccgatc gccaatggcg ttattctaaa ttccctgaag tgccgttatt
    25441 cggacgtgct gctcgtgaaa aacatttagc gactttaaaa gcagagcgtg atgaaaccgc
    25501 agaaaaacac gctgaacgtg cctttgatgt gcagaaatgc cagcgtttac atcaacactt
    25561 aagccaattt atcggcacgc acttaaattt agcgttccaa gaaaaccctg aaatgttaat
    25621 gcaagagatt gcggcagaac gggcagaaat tgaacgtgaa ttggcacaat cagccggtaa
    25681 cgaacagcaa ttacgtcacc aattagaaag cgtaaaagcc cagttgcaaa tgttgaataa
    25741 aattctaccg cttgcgaatt tattagccga tgaaacgctg gaagcacgag cggaggaatg
    25801 tcgtgagcaa ttagaattgg cagaagaaga tgaaatgttt atccgccaat ttggagcaac
    25861 attaagccaa cttgagccga ttgcagccgc attaaaaagt gatccggctt tatttgaaca
    25921 gttggaagcc gattaccgcc gttcagttgc cgagcaaaaa gtgttacagc aaaaagtgtt
    25981 cagcttggct gatgtaatga atcgccgcct ccattttagc tatcaagaaa cggtgggtac
    26041 agaaggctct gcattaaccg aacagctacg ccaacgtttg gaaaatgcac aacgtgagcg
    26101 tgaacaggct cgtgatcagc tgcgtcaagc tcaagctcaa ctttcacaat ataaccaagt
    26161 attgaccggc ttacgcagtt cttatgaggc gaaaaaccaa atgctacaag agttaattcg
    26221 tgaaattgac gatttgggcg tgcgtggtga tagcggagcg gaagagcgag ccagattccg
    26281 ccgtgatgaa ttgcaacaac gtttaagcca gcaacgttcc cgcaaaggtt atttagataa
    26341 acaaattgcg gtgatcgagg cggaaatgga taaccttaac cgcaccttac gtaaagccga
    26401 acgtgattat catacacaac gtgaattggt ggtgcaggca aaagccagct ggtgtattgt
    26461 gcaacgttta tctcgtaaca gcgatgtgga aaaacgttta aatcgccgtg aattggctta
    26521 tcaatcggct gaagaattac gttcgatttc ggataaagct ctcggggcat tacgcaccgc
    26581 cgtggcggat aatgaatacc tgcgtgatag cttgcgggct tctgaagata gtcgcaagcc
    26641 ggaaaacaaa gtggcgttct ttattgcggt ttatcagcat ttgcgtgagc ggattcgcca
    26701 agacattatc aaaaccgatg atccgattga tgcgattgag cagatggaaa tcgagctttc
    26761 acgcttaacc aatgaattaa ccggtcgtga gaaaaaactg gcgatcagtg cggaaagtgt
    26821 ggcaaatatt ttacgtaaaa ccattcagcg tgaacaacaa cgcattttgc aactgaacca
    26881 aggtttacaa aatattgcat tcggtcaggt aaaaggggtg cgtttggtgg tgaatatccg
    26941 agatacgcac gctattttac tcaatgcgtt atccaataat cgtgaggaac acaaagattt
    27001 attcgacagc caaaaactga gcttctccga agccttagcg atgttgtata aacgggtgaa
    27061 ccctcatatt gagatggggc aacgtacacc acagaccatt ggtgaagagt tattggatta
    27121 ccgtaactac ttagatttag aagtggaaac cttccgtggt gcagacggct ggatgcgtgc
    27181 agaaagtagt gcattatcga ccggtgaggc gatcggtaca ggtatgtcga ttctcttaat
    27241 ggtagttcaa agctgggaag aagaagctcg ccgtatgcgt gccaaagata ttctaccggc
    27301 tcgcttattg ttcttagatg aagcggctcg attagatgct acctcaatta atacgctatt
    27361 tgaactctgc gaacgtttgg atatgcagtt attaattgca gcccctgaaa atattagccc
    27421 tgaacgaggc acaacttata aattggtgcg taaaatcacc aataaccaag agtatgttca
    27481 cgttgttggt ttaaaaggct ttgctaaata aaacttagca ctttaatcta aatatgtata
    27541 aaaagattgt tgatggaaac attggcaatc tttttatttt cagaaatttg gaaatttgat
    27601 tttgttttta catttatttt taaaattttg aaaataaatg tgtttttctc ggatttaatt
    27661 aatatgaaac ttgctcgaaa agctcaacgg agattatcgt tccttagagt atttagtctt
    27721 gcctttgcgg cttttatagt aaacaccacc gaatttattc ctattgcatt gctttcagac
    27781 attgcaagca gtttccaaat ggagccttca tcggcaggca ttatgatgac ggtttatgcg
    27841 tgggtggtat ttttattatc gttaccgttg atgttactca cggcgaatat ggaaagaaaa
    27901 cggctgttgc tgatgttatt tatgggcgaa tgatcgggca agccttaggc tggcgggcaa
    27961 cctttggcat tattgggatt atcgctttga ttgtgctaat gatgatttgg cggttgctgc
    28021 cttatttacc aagcaaaaat gcaggctcga taaaaagttt gcctttgtta tttaaacgcc
    28081 cgatgttaat cggcatttat ttgctggtgg cattgatcgt ttcaggacat tttaccgctt
    28141 acagctatat tgagccgttt atgattaaaa tcagttcggt gagtgtggaa aacaccacct
    28201 ttattttgct ggtttttggc ttggcaggtg tggtggcaag ttttttattt ggtcggttat
    28261 atggcaaagc cccgaataaa tttatcttaa gcgggatcgc cattattatg tgcagccagc
    28321 tttgtttact gtttttgagt gactcaacag tggcaatgtt tatggtcgct tttgtctggg
    28381 gaattggcat taccggaatg agcattgcgt tgcaaatgaa ggtgcttgaa cttgcccctg
    28441 atgcgactga tgtcgcaact gcaatttttt ccggcactta taatttaggc attggcggtg
    28501 gagcattact ggggagcatc gctattcagc aactgggatt agccaatatc ggatttgccg
    28561 gtgggagtat tgcttttgta gcaatggttt ggtttgtatt tgttagcttg aaatatagac
    28621 agctcagata gtgacaagcg gtcatatttt gctgaaattt tgcaaatttt cctgcaaaaa
    28681 tgaccgcttg ttgaacatta cttttcaata aattgattgc tttgttgaat catttgtaag
    28741 aacaacgcta atggtggtcg agcatctttc tcgtgttcgc cattgctgtt aaagtgctta
    28801 aagttgcctt tacgatcaat ttgatattga tcgccattcg gcataatcgc cacattccat
    28861 ttgtgattag aactggatac ccataaacgt tggttctggg tgcttaaatc cataccttgt
    28921 gcataatcat tcagcggatt ttgcacgccg aagaattggc tcagtaaggt tggcataata
    28981 tctaaatggc ttgaaaggaa atggtactct ttgctttcgc cttgccagta gaacatcatc
    29041 ggcacttgaa tgtgttgttt atcgaagcta ttttctgctc caacttcatt actaatatcg
    29101 gcggtaatga ttaccagcgt attcgccaat agtgcatttt gggtcaaatg ttgccagatt
    29161 tcagcgaatt gccaatctaa taattttgcc tgctcttgag cggtgtgggc gaagggcatt
    29221 cttaagtcta aatagctaaa gaacggattt tccaatgagc gagagctgat ccagtttttc
    29281 cattgcccaa tcgcccctac attactgtgc gccgtaggca ataaaatacc agagaagatc
    29341 gcctgatgat aaatcgggtc ggcaaaacca ttatgtgaaa acagccctaa ttgatagtcc
    29401 gattttctag cgatttcgat aagcggtgac acggttttat cggctaaaac ggaatccaaa
    29461 tatttaccgc ttaaactgta aaatagacct aatgcaccgg cagaggctga atcaccacta
    29521 ctgtaatgct gcataaagcg gtggctttgt tggctgattt ctgtcagctt aggcattgtt
    29581 tcggcattta ttatctgttt agataaacct gataaattaa tcagtaaaat attagttgag
    29641 ggcgttttgg tcgcaatcaa gggagatttt ggataattca gatagaaagt atctagtctg
    29701 ccactttctt caatttcttg attaaattct actcggtcaa taaaaccgtg tttttctaag
    29761 aaattacgag ccgtcatcgg gtaagaaagt gggtagtttg ctcgttgagc ggtaatcggg
    29821 cggtaggcat tcatatctgc ccacgcatag attaaatgag tagcggtaaa gctgatcacg
    29881 aaaaagagag cgacatattt gccccatttt tggcggctaa aactacgcag tttctgccag
    29941 caccagcgag agtagagcat ttctgccagc aaaaggagtg gcattggtac aaacagcagt
    30001 tgccatttac gggtcagttc cccttcttcc ggattaacta acagatccca tacaagcggt
    30061 gataaatgca gataaaattg cttgaagact tcagtatcca ccaataacac ggtttgcccg
    30121 atggtggcta aaatcacgga aagcccacga taggtgcgat gattcttaac aataaaactg
    30181 agcggaaaca gaattaatag aaatcctgca aagaccacaa agctgaaatg cccgaacagg
    30241 ctgacaaaga aataaagttt gcctacaagc gtgttcggcc agtctgcatt aaatgcgtaa
    30301 cgagaggaaa tgagtagtgc caacacaata ttaaatagtg caaaccaatg cccccacgtg
    30361 attttctgtg aggtttcttc tcgatattgg cgagaattgg tcggcaataa actgcgtagg
    30421 cgtgcaaaca tcatcttatt tggtttttag tgattgtttt aatgcatcgg caaaggcatc
    30481 agcgagagct tctctttgtg ccgggctttg aatattttca attaaaatgt tagttatcat
    30541 attgcctaat gccattaacg ataaatccac cggtgcttta tgcttttcta tggtggcgat
    30601 gaggtcagcc aatagctgct caaattgttt ggtgtggtat ttagatttcg ttgccatatt
    30661 gaaataaaga tgatcctata attaggtaca aatagtagca caaaaataat aataaagtag
    30721 cgttaagcgt tattgtttga gtgatttttg caaagtttta gccaaaaatg accgcttgtt
    30781 caataaatga ggaattttgc aactatttta ttttaatttg ataggtgttt tctgctttct
    30841 tttttcataa aaaaagctat aatgaacggc tgttcattat aggtaaggag ataaaatgtc
    30901 taggcgaagc gagccaaaag aagagatggt aaaccgtatt ttatcggcaa ccgagtcgct
    30961 gattgtgcaa gaaggtttgc aaaacctttc aatgcgtagt attgcaaaag aagcagggat
    31021 cgcttccggt acattatatc tttactttaa aaccaaagat gatttattgc actcattggc
    31081 tgcccaatta ctcgaatgtt ataacggtta tatgcatttt gagtttaagc ctgaaatggc
    31141 gttatttgag caatataaag cgttggtcaa taaaaaatgg cagtttttaa tcgagcgttt
    31201 agatttggta aaacagtttc aagcggtgat agggattgat gaattgattc gggaaaccat
    31261 agctgatgaa acttcctttt ggaataaatt aattttagaa gggaaaaagc aaaggattat
    31321 tgctgatcta tctaatgagt tgctttatgg attaagcatc ggcacattgg tggatatcca
    31381 atatctgcaa aatctgaatc aagaaaatca gtttgatgga tatttagacg agattatttt
    31441 acgcacttgg aaagcaatca ctttttaagt ttctttttat tagttttatg gagaatgtat
    31501 gacaacggaa acacagaagc tgggtaaagg cagaaagttt ttaattgtac tcacattgtt
    31561 aatcgtattg attgtgtttg ctgcaatcgt agggttacaa aaaatcgggg caatgaaaaa
    31621 agccgaagca gcggcaaata tgccggaggc ggtgagcgaa gttactgcta tgcaagtgac
    31681 gacccaagaa tggacaccaa ccatttctgc ggtcggttat attcgcccaa atcaaggggc
    31741 aatgttaagt gctgaaactt caggcgtggt tagccgtgtt ttggtcactt caggacagcg
    31801 tgtgaaaaaa ggtgatctgt tagtagaatt tgacagcagt gttgaaattg ctaacttgag
    31861 agcctctgaa gcgcaattac cgaatgccaa agcaaattta gagcgttacc gtaatctgat
    31921 tgcctcaaac agtgcttcta aagccgagtt tgataatgct caatctacct acaaccaatt
    31981 attagccaat atcgaggcat tgcgtgctac gattaaacgc cgtcaaattt atgctccgtt
    32041 tagtggttta gcgggtatcg tgaatgtgaa tgttgggcaa tacattacaa tgggtacgga
    32101 aattgtgcgt gtggaagatc aatcttcaat gaaagtacgt tttaccttgc cgcaaactaa
    32161 tttagagcaa atctcgattg ggcaaaaagt gacagccgta attgatgcgt taccggcaca
    32221 aaccttccca gctaaaattg tggctattga tccggctgtg gatcgtttaa ccggcttaat
    32281 taatgtggaa gcggtgattg aagaagggca ggaaaaattg ctttcaggta tgtttgcccg
    32341 cttaaatgtt gctttaccaa cagaaaccgg acaaatcgtc gtaccacaaa tttctatcgc
    32401 ttacactatg tatggtgaaa cggtatatgt gctgcaacca ttatctgatg aagataaaga
    32461 aatggtgaac aaaatggcgg tacaaaaccc aagtttagat gtaaacaaaa tgtaccgtgc
    32521 aaaacagatg gaagtgaaaa cggctgaccg caaaggaaac tattcacaat tatccaaagg
    32581 cgtgaaagca ggtgatctga ttgtaacagg cggtttacaa cgtttaagta ataatgcgtt
    32641 ggttaaagtt tctgatacag aagccgtagg cattaccaca ccggcgaaaa acagtaaact
    32701 gtagtggagt gagttaagtg aaatttactg acatctttat taaacgtcct gttttggcag
    32761 tttgtatcag cctattgatt acgatcctag gcttgcaagc aatcgaaaaa ttgcaggtgc
    32821 gtgaatatcc ggagatgacg gtctcgattg taaccgtgag tgttaactat tcaggtgcag
    32881 atgcacgttt aatgcagaca ctggttacct cacagttaga agaggctgtt gctcaagcgg
    32941 ataatattga ctatatgact tcatcaagct ctccaagtac cactacggta acggcaaaaa
    33001 tgaagttaaa taccgatccg aatgccgcac tttccgatat ttcggcaaaa gtgaatgcgg
    33061 tacgctcaaa tttaccgagc ggtattgatg atccgtcaat tagagtctca accggttcaa
    33121 atgatgcgtt aatgtatatc cgatttgtct ctgatgaact taatacatca caagttaccg
    33181 attatattaa ccgtgtagta aaaccacagt tctttacggt aaatggtgtt tctagcgttg
    33241 atgtgtatgg ctctgttttt ggcttacgca tctggcttga tccggataaa atggcgagca
    33301 ataacctatc aggggcggct gtattatcgg cattaagtgc caataacttg caaaccgctg
    33361 cgggtaattc taacggttac tatacggttt atagaaacaa agtactttct accacgcctt
    33421 ctgtgacaga gttagaagag gttacggttt caaccaccaa agatggaaaa accatcaaat
    33481 taaaagatat tgcgactgtt gagctggata aataccaaga tgcagcaaga gcaacggttg
    33541 gcggtaaaga tgcagttgtg cttgctgttt cggtagccgc aacggcaaac tctttaaccg
    33601 tagcgaaaga tatttatccg atgtttgagc aggtattaaa aaatctacca agcaccattc
    33661 aaggagatat tgtttacgat aaaaccattg cgattgatag ttctatcaaa gaagtaatta
    33721 aaactattgg tgaggcaacc gtcattgtat tggtagtaat tatcctgttc ttaggttcat
    33781 tacgagcaat gattgtaccg gtgattacca ttccgatttc cttaatcggg gtattattct
    33841 tcctgcaaat gtttggtttc tcgatcaact tgcttacttt gctggcgttg gtattagcga
    33901 tcggcttggt agtggacgat gcgattgtcg tacttgaaaa cgtagaacgt cacgttaaag
    33961 aaggtaaaac gccatttgat gcagcgatta tcggtacacg tgaaattgct ttaccggtta
    34021 tttcaatgac tattactctg ggtgcagtat attcaccaat ggcattaatg accggggtaa
    34081 cagggacact atttaaagag ttcgctttaa cgcttgccgg tgcggtattt atttcgggga
    34141 ttgcggcatt aaccctttcg ccgatgatgt ctagccgaat attaaaagaa cataaagaag
    34201 gggaagagtc agcatttgcc cgcgtggtgc atagatcact agataaaatg accagctgct
    34261 ataccaatat gctaagcggt attatggctg ttcgtggttt cgtcttattc tttgcggtgc
    34321 tgatcttcgc cagtttaccg atgttatttg gctcactttc cagtgaagtt gcaccgacag
    34381 aagaccgtgg ctttgtggtt ggtatttcta atggaccttc aaacaccaat ttagattata
    34441 ccgaagcagc gttagcccaa tttaatcagg aagtaactaa attacctgaa gtatcttcct
    34501 taatgacagt ttcaggcttt aatggtgcaa atagtgcatt atcgattatt gcattaaaag
    34561 attggaatga tcgtagccgt gaacgtgctg cgatttctaa tgatgtggct gcaatcggta
    34621 aaaaagtggt gggtatggac gtgaatgcaa ttgcattccc tgaaatttca accggtgaaa
    34681 atgatctacc attctcatta gtgattacta ccgctgatag ctatgaaaaa ttggcaatcg
    34741 ttgcctctga attcttgaaa aaagcccaaa cttccggtca gttcttcttt gcgaatttag
    34801 atttgaaatt tgatacggtc acgatgaata tgaaattcga ccgtgaaaaa atgggtgctt
    34861 atggcgtgac aatgcagcag gtgagtggca cattaggggc attcttatcc ggtgcgatta
    34921 ttactcgtgt cgatattgac tctcgtgctt acccgattgt gtcgcaagcg gtgcgtaatg
    34981 atcgtttaaa tcctgaagat ttaatgaatt actatgtcac gactgcaaca gggcaatcta
    35041 tcccgttagg ttcatttgtg acgatggaat taaaaacatc accatcttct ttacctcgta
    35101 tgagccaatt aaactcggcc accattggtg gggtagtatc tggctcaatc ggcgatgcgg
    35161 taaattgggc gaaagcagaa ttagatcgca ctttaccatc aggttatcaa tatgacttcc
    35221 gtggtgaatc tcgccagttc gttcaagaag gtaatgcgat ggcaatgact ttcgctctag
    35281 cagttatcat tatctatctt gtacttgcaa ttcaatttga atcttggcgt gacccattag
    35341 taattttggt ttctgtgccg ttagctgtga gtggtgcatt gttggtaatg aacattccaa
    35401 ccgcaatgaa aggcttgttt atggggattg cagcaggcac tggctcgaaa gatatgatgg
    35461 cattcgccaa cggtatttgg acggcaggtt ataccttaaa tatctattca caagtaggtc
    35521 taattaccct tgtcggctta attactaaac acggtatctt gatgtgtgaa gtggcgaaag
    35581 aagagcagtt actgcacggc aaatcacgct atgaagctat tttccacgca gccacgattc
    35641 gtttacgccc aattatgatg acaacggcag caatgattgc aggcttaatt ccgcttctgt
    35701 ttgcggtggg tgccggtgca atcgcccgct tcagtatggg tatggtaatc gtagcaggct
    35761 tggcaatcgg gacattgttt actctgttta tcttgccggt tatctacact ttcttagggc
    35821 aagaacacaa gccattacgt gaatttgacg aggaaaaata tttcccaacg acaaaagaag
    35881 catagtttta aatagcaaaa gagcgtagcg atacgctctt ttttgttggc ttacaagcgg
    35941 tcgtttttta tttattgttt gctaaaaaat cacaaaattt aaccgcttga aagtatattt
    36001 tcagatagcg taaacgtttc cctatttaca gaaacctagt tcctctgtat aatccgctcg
    36061 caattttcca gtacagattt tcaatttaat cattttttaa ggaataattg caatgctacg
    36121 aattaaacaa gaagccctca cttttgatga tgttcttctc gtcccggcac attctactgt
    36181 gcttcctaat actgctgatc tttctactca attaactaaa accattcgtt taaacattcc
    36241 gatgctttct gctgcaatgg ataccgttac agaaactaag cttgcgatct cccttgctca
    36301 agaaggcggc attggtttta tccataaaaa tatgtcgatt gaacgccagg cagaccgtgt
    36361 gcgtaaagtg aaaaaatttg aaagtggtat tgtttctgag ccagtgacga tttctcctga
    36421 tatgacatta gcggaattgg ctgaattggt gaaaaagaac ggttttgcag gctatccggt
    36481 gattgatgaa aaccaaaatt tagtgggaat tattaccgga cgtgataccc gatttgtcac
    36541 ggatttaagc aaaacagtgc gtgaatttat gacaccaaaa gaccgtttag tgacggtaaa
    36601 agaaaacgca agccgtgaag aaattttcca cttaatgcac gaacaccgag tggagaaagt
    36661 gctggtagtg aataatgaat ttcagttaaa aggaatgatt accctaaaag actaccaaaa
    36721 agcggaaagc aaaccgaatg cctgtaaaga tgagtttggg cgtttgcgtg tgggggcggc
    36781 agtgggagcc ggtccgggca atgaagaacg aattgatgct ttagtaaaag cgggtgtcga
    36841 tgtgctatta atcgactctt cgcacgggca ttctgaaggt gtattacaac gtgtgcgtga
    36901 aacccgtgca aaataccctg atttaccgat tgttgccggt aatattgcca ctgcagaagg
    36961 agcgattgcg ttagctgatg caggagccag tgctgtgaaa gtaggaatcg gcccgggttc
    37021 aatttgtacc accagaattg taacaggcgt tggcgtgcca caaatcacgg caatcgcaga
    37081 agcggcagct gcgcttaaag aacgaggcat tcctgtgatt gctgatggtg gaattcgtta
    37141 ttcaggcgat atttcaaaag ctattgccgc cggtgcaagt tgcgtaatgg tcggttcgat
    37201 gtttgccggc acagaagaag ccccgggtga aattgagctt tatcaaggca gagcattcaa
    37261 atcctaccgt ggaatgggat cattaggtgc aatgagtaaa ggctcgtcag atcgctattt
    37321 ccaatctgat aatgccgccg acaagctcgt accggaaggg attgaagggc gtatcgctta
    37381 caaaggctac ttgaaagaaa ttatccacca acaaatgggc ggcttacgct cctgtatggg
    37441 attaaccggc tgtgccacta ttgaagaact ccgcaccaaa gcagaatttg tccgcattag
    37501 tggtgctggt attaaagaaa gccacgtcca cgatgtgaca attaccaaag aagcaccgaa
    37561 ctaccgaatg ggttaatagc ctttctcact ctctcccctt gtgggagaga gaccgtttta
    37621 aattacgttc agtaatttaa aacagagaga gggaataagt ggttagattt tcttaaaatt
    37681 ttacaaaaga ggctatatgc tccaagctat catttttgat atggacggcg tgattgtgga
    37741 taccgaatat ctggaatttt ccttacaaaa acagtttatt gaagacatca aagaacacag
    37801 ccgcccgatt actttagaac aacaatcgga agtggtaggc aaatgtttaa aagaaattcc
    37861 ggtgattatc aaaaaactaa gcgaatccag tttgccgatt gaggaaattc gtgcacgtta
    37921 ctacgccttt ttccaagatc tgtttagcaa agtggatttt aaaaccattt tcagagccga
    37981 tattcagcaa attattcaat ttgccaagca gaatcaaatt aagcttgcgg ttgcctcttc
    38041 ttccgccctt tcgcatattg aaaatattct cacggtttgc ggcattaaag acgaatttga
    38101 tttaatcgtc agcggtgaac agtttgaaca cagcaagcca gacccaacca tttaccgcta
    38161 cacctgcgaa aaattaggcg ttgagccaca aaatgcagtg gcgattgaag actcctacta
    38221 cggaatgctc gccgccaaaa ccgcaggctt aacggtgatt ggttacgaag aaaaacgaat
    38281 actgattgac caaagtttag cggattatat gggcaaagat atgaaagaga ttttgaagat
    38341 tcttcaaaaa tgtaatactc caagttaata aacggtcgat ttttatagaa attttgtcaa
    38401 tgtttctact tcaagtactt ggaacagtct atcggcttga gtaacctaga aatgagagtg
    38461 gatattttaa tattaatagg ataaatagaa tgaaaaaatt aagtttaatt tcaatcgtcg
    38521 ctttatctgc gtgcagtatt ttcggaccat cttattcagg agaaacaacg gccagtcctt
    38581 tattaaagtt ggacacagaa agaaatataa atctgtattt tcaagcaata cataaatgta
    38641 ctcctgataa aattcataca aaaatcatca atattccaag tgaaggtaat gcaaaagaac
    38701 tttggactgc aacaggttgt aataaaacgc aatcttttat tattacatat agaaacgatg
    38761 gggtaggcgg cacttttatt aacatgacca caacgccata atttaaagga aattacaatg
    38821 acaaacatcc accaccacaa aattttaatt ttagacttcg gttcacaata tactcagctt
    38881 atcgcacgcc gtgtgcggga gattggggtt tactgcgagc tttgggcttg ggacgtaacg
    38941 gaagagcaga tccgtgaatt taacccaacg gggattattc tttcaggagg tcctgaaagc
    39001 accactgagg aaaacagccc acgagcgccg gagtatgtgt ttaacgctgg tctgccagtg
    39061 ctgggcattt gctacggaat gcagacaatg gcgatgcagt tgggcggttt aaccgaaacg
    39121 tccgaccacc gtgaatttgg ctatgcctcg gtggctctca aatctgccga tcaacttttt
    39181 gcaaatttaa acgatgattt gaccgcttgc gagccaaaat tggacgtgtg gatgagtcac
    39241 ggcgacaaag tcaccaaatt accaccgcac tttaccatca caggcgttac cccaacctgc
    39301 ccgattgccg cgatgtcgga cgaaagccgc cgtttctatg gcgtgcagtt ccaccccgaa
    39361 gtgacccaca ccaaacaagg cttggcgttg ctgaaaaact tcgtggtcgg catttgcggc
    39421 tgtgaaacga actggacggc agaaaacatc attgaagatg cggtgaaacg cattcgtgag
    39481 caagtgggcg atgacgaggt gattttaggt ttgtcgggcg gggtggattc ctccgtcacc
    39541 gccttgctat tacatcgtgc tatcggtaaa aacctgcact gcgtatttgt ggataacggc
    39601 ttgctccgct tgaacgaagg cgatcaagtc atggaaatgt tcggcaacaa attcggtttg
    39661 aacattgtgc gagtgaatgc cgaagaccgt ttcttagaag cgttaaaagg cttagacgaa
    39721 ccggaagcta aacgcaaaac cattggtaaa gtgtttgtgg acgtgtttga tgacgaaagc
    39781 aaaaaactta gctcggtcaa atggcttgca caaggcacga tctaccctga tgtgattgaa
    39841 tccgccgcca gcaaaaccgg caaagcccac gtgattaaat cacaccataa cgttggcggc
    39901 ttgccggatt atatgaagct cggcttagtc gaaccgttgc gtgaattgtt taaagacgaa
    39961 gtgcgcaaaa tcggcttggc actcggctta ccggctgaaa tgctcaaccg ccacccgttc
    40021 cccggcccgg gcttaggcgt gcgtgtgctg ggcgaaatca aaaaagagta ctgcgattta
    40081 ctgcgtaaag ccgatgcgat cttcatcgaa gaactgcaca aagccggctg gtactacaaa
    40141 gtcagccaag ctttcacggt attcttgccg gtgaaatcgg tgggcgtaat gggcgatgga
    40201 cgcaaatatg actgggtcgt cagcctgcgt gcggtggaaa ccatcgactt tatgaccgct
    40261 cactgggcgc acttgccgta tgatctatta ggcaaaatct ccaaccgcat tattaacgaa
    40321 gtgaacggta tttcccgtgt ggtgtatgac gtgagcggaa aaccaccggc aaccattgag
    40381 tgggaataac tcttacaaaa taggcttctt ataacctaag ttcagtatct aaagctgaaa
    40441 aatgttgtta actgcttaat gtagcggttt agaataaagg attgattcca acggaatcaa
    40501 tccttaaact aagtgccttt tagtaaaact aaatattcaa tttttagttt tatgatttca
    40561 gtaagccaga tgaaccttcg gaataatctc taggttgatc ttcttccgtt ttttctgccg
    40621 gaataggtaa tttggtttgt tggaaaaagg taatattttt tgatgcttct ggtaatagct
    40681 tttcagagct ttgtgctaaa tgggtataaa gctttttata atcagaagct agacttgaaa
    40741 gtaattgggc tgattgctca aagtgttgtt caagtttttg tttttgctca tccacttgag
    40801 ttttggtttg cttcaactct ttttccagtt catgctgttt tctgacacta ctgttaaata
    40861 ctctaactag agtgcaacct attacagcac ctacaataaa tgctgccata atggctgccc
    40921 aaacatctgt tgtccattgt tccatcataa actccttatg ttttagtgat tgattactgc
    40981 tatttttaac atttcagttt ttatttgaaa agctccaaat gattaaaatg tgatataggt
    41041 tcaattttga aagattatca gcaaaaaatg ttagattttt gagtgaaatc tctgta
//
LOCUS       DANMCL010000007        39415 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.007, whole genome shotgun sequence.
ACCESSION   DANMCL010000007 DANMCL010000000
VERSION     DANMCL010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39415
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.007"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(77..1132)
                     /locus_tag="PXF40_000349"
     CDS             complement(77..1132)
                     /locus_tag="PXF40_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5801726.1"
                     /translation="MGRPRKQQNRYLPENLRPKTVTRKSGKTVIYWLYRTHGKTEISL
                     GTNRNEAFIKAAQLNIERESQTARITFGLVAKRYRDEVIPQKKASTAQTDLCKIKNLL
                     LFFNDAPLEEITPQHIREYMTWRKDTPGSANNEFSMFSHIWQYAREWGYTNLPSPNIG
                     MKRYPIRKREIYVENNIFQMVYEVADQDMRDLMDLAYITGQRPVDLVNIRKEHIFDGY
                     LHIVQQKTQAKLRIEIVGKLADIIQDRLEKATGTHLFSTKKGEKLTARKLGKRFTYIR
                     EQAVKNNPEYANEIMAFQFRDLRAKSGTDKALSLGEEAARQQLGHTSVQMTKTYIRKA
                     PIVTPIKESVPSSKHQS"
     gene            complement(1092..1367)
                     /locus_tag="PXF40_000350"
     CDS             complement(1092..1367)
                     /locus_tag="PXF40_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5801727.1"
                     /translation="MEQPTEFLTKDELADLTGYRQKKRQIEWLRERHYIIQDENKYKP
                     LVLYKDVYGHPRQQYPEAQSTGKWKSPAYLMGVKNGKTTQTTESLLT"
     gene            complement(1457..1963)
                     /locus_tag="PXF40_000351"
     CDS             complement(1457..1963)
                     /locus_tag="PXF40_000351"
                     /inference="COORDINATES: protein motif:HMM:NF024784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HDL5801728.1"
                     /translation="MRILPRNENYAATENGEIFSFLSNKILKPRPLKNGYLRVQLVDE
                     NGVKDYLIHRLVCETFHGYPDLHVNHKDRDKTNNRPENLEWCTRSENMLHCSRLGGFS
                     KQSERMKKMNIESCSVPVAAITLDGKLFKKYTSMTSAGKDGFSHSKISLCIQGKRKTH
                     KGYIWQKL"
     gene            complement(1941..2537)
                     /locus_tag="PXF40_000352"
     CDS             complement(1941..2537)
                     /locus_tag="PXF40_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5801729.1"
                     /translation="MPLSITANLTKAVQLKHQGEALSGGSETLVVHGTQDPIISQNKA
                     HCLGRNNGQENVLFEVKGAEAVRISEIQDKTPTLKARMGTGGNNIPCIALAGNTIGRQ
                     PQNDGNGNVFDESGVSYMLTRTDVHAVSAGTTIRKLTPTECERLQGFPDGWTKITYRG
                     KSAEECPDSPRYKAIGNSMCTNVMKWIGERLSAYLTSQ"
     gene            complement(2458..3777)
                     /locus_tag="PXF40_000353"
     CDS             complement(2458..3777)
                     /locus_tag="PXF40_000353"
                     /inference="COORDINATES: protein motif:HMM:NF024795.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hint domain-containing protein"
                     /protein_id="HDL5801730.1"
                     /translation="MNNIIKFTYGSICSGIEAASVAWHDIGTPLWFSEIEPFPCAVLA
                     HRFPDVPNLGDMTALPEKILNRKIPAPDVLVGGTPCFTAGHMVLTDKGYMPIETLSVG
                     DLVVTHKGQLKPILRVGSEIKPVGKLTAVGLPESIVCTPEHPFYAQKWQTINTKRNGK
                     YHRKTIISKPEWIEAHKLEGYQWVSLTDFSVMPYGGFHSKLTDDEVLLIAGYYLGDGW
                     IRRWKGKNKKAVVISVNKEKYRKFSLSFAKLPHHITTENNSVIKITICDTELADFLYS
                     QFGEKAGGKTIPAWCLSHSFRSKIFEGYMITDGSFRNGVYTANSISKSLAYGIAALSQ
                     TLGYISSVSKVTVAPTKEIQGRIVNQNDYYQMRAFLQSTSRKSRLDENRLLRSVQSFE
                     ITGNEVVYNIEVADDNSYILNNAVVHNCQSDKGGTVKASGGGFEWRE"
     gene            complement(3774..4679)
                     /locus_tag="PXF40_000354"
     CDS             complement(3774..4679)
                     /locus_tag="PXF40_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5801731.1"
                     /translation="MQFQEHNNRKKADKFAEYITGEALRRYVAEKVKQYARNNVSVFD
                     GAAGSGQLEQFVRPTSFTAVEVQSESCDVLRHNFPTAQIYNQSFFLYPNGEPCDCVIM
                     NPPFSLKFKDLSQAEQAQIQSEFPWKKSGVVDDIFVLKGLANSHQWGFFILFPGVGYR
                     QTEKRFREEVGNQLVELNRIQNAFEDTPIEVLFLVVDKTKTTDDCSRELIDCAGGQIQ
                     QICADKWKIRPDHWESIQPPPPPQEEIKPLELEAFAREQAIERIVGEVRLSKLIAEFF
                     EPELRRTFNAFIDDICVAVQAEKIV"
     gene            complement(4913..5590)
                     /locus_tag="PXF40_000355"
     CDS             complement(4913..5590)
                     /locus_tag="PXF40_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5801732.1"
                     /translation="MSNQVQFPVFNFNSSAVRVIIDPNQEPWFCGADVCRILGYVNES
                     LTLQKHCKENGVSKRYLTDKMQRQQKAIFINEPNLYRLIIKSRKPEAEKFEAWVFEEV
                     LPQIRKTGKYALQNNQQNLPLAPPPKKYSFDFTEDELQSLIWAWFAFVRGIHTFRYIY
                     PMFQKLGSNIAPEIYGQGFEYSHTAQSAHKILERITKEFDYDPMTNWRVLKHVRGFDP
                     AFKKPTF"
     gene            complement(5838..6677)
                     /locus_tag="PXF40_000356"
     CDS             complement(5838..6677)
                     /locus_tag="PXF40_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HDL5801733.1"
                     /translation="MANSVMIVQGVEVKVTARDGEDYISLTDMCKAFGDSDQLIKNWL
                     QNKNTIEFLQVWEELNNPNFNLVELHQIKNNIGLNRFVMSVKKWTATGAIGLVAKAGR
                     YGSGTYAHKDIALEFGSWLSPEFKLYLIKEFQRLKQQEANESKLEWSVKRILSKANYR
                     IHTDAIKAHIIPALLNTKQHTFVYSSEADILNQALFGQTAKQWKDRNPNLKGNMRDHA
                     TVEQLTVLAALESQNALLIEQGYSQEERLAMLNRLAIQQMSSLLQTRAIEELKEKPLL
                     IEE"
     gene            6907..7284
                     /locus_tag="PXF40_000357"
     CDS             6907..7284
                     /locus_tag="PXF40_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801734.1"
                     /translation="MFSLLRDALTFAAMFTGILFPAIIHKYDLSLGTQIQLLSFVPAF
                     FVLCHFLIKRKYQRDFDRLSYLSAVVCVAMCAGVGAFSQSEMIELGFKVERVLDYVTI
                     KFLLYFWSLLLLPVVLRKLFGKD"
     gene            7416..7604
                     /locus_tag="PXF40_000358"
     CDS             7416..7604
                     /locus_tag="PXF40_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801735.1"
                     /translation="MKELFKQWLINQDSPFINSCGVECILSKVDDWLNIINANEEETE
                     TLVEWLNAFLQEVSVFVA"
     gene            complement(7608..8105)
                     /locus_tag="PXF40_000359"
     CDS             complement(7608..8105)
                     /locus_tag="PXF40_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL5801736.1"
                     /translation="MQQLIKNIEQWAEDRNLINGSTPQKQMLKLMEEFGELCAGVATN
                     EFETILDSLGDCLVICTIMRKQLKMEKLFSISHCDNTNFNCGVAAQIVQANIDLGNVA
                     SELSRGCDLSRLEDYLSGFENQLDLIAQFYKTDVQTALLYAYIQIKNRKGKMIDGVFV
                     KAEDL"
     gene            complement(8089..8289)
                     /locus_tag="PXF40_000360"
     CDS             complement(8089..8289)
                     /locus_tag="PXF40_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801737.1"
                     /translation="MTDTKRLDFIKKHKMEIRYNGLSDEFVISNHAENSQHFRMARNA
                     DLRTAIDEAMKEMRGLNNATTN"
     gene            complement(8286..8804)
                     /locus_tag="PXF40_000361"
     CDS             complement(8286..8804)
                     /locus_tag="PXF40_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5801738.1"
                     /translation="MNEDKFFSVDVSNDIHILNLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERESELFGEVEQVIEPPTLVENNG
                     WISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIAVTH
                     WQPLPKLPKDNQ"
     gene            complement(8914..9717)
                     /locus_tag="PXF40_000362"
     CDS             complement(8914..9717)
                     /locus_tag="PXF40_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HDL5801739.1"
                     /translation="MDKSTIQQISTLAVAATKEVQTDFGTVMLPEGIKLQNLEPFQAH
                     RNQFRAAFSTQRFGSLIEYATANAQENAQCFIDQEKMSAEIVFDMGNREQAGHAKHRA
                     NLVMKKTAAYKALCEINGSRRSQRDFSDFLEDWGGYLTAYHHEDEISIKNAVQAVRKM
                     TIDYARNEEHELSDFAAKKSAMESVEAKSTLQLPTHLVFTCNPYNGLDTRSFTLRVQV
                     LTGSGEPVLTARLVQAEQIEEAIATEFAEKLSDALSETSIKVNIGTIEI"
     gene            complement(9787..10146)
                     /locus_tag="PXF40_000363"
     CDS             complement(9787..10146)
                     /locus_tag="PXF40_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801740.1"
                     /translation="MAKTNVPEFLDELDCGIFKDKLATALSEVALGVLTHDKKGKVTV
                     EFSLDKMDSDSPSVQIQHKLSYVKPTKRGKSAEEDTTATPMYVHKGGALSATPEKTET
                     AVKESPSGLKALSKAAA"
     gene            complement(10182..10640)
                     /gene="ssb"
                     /locus_tag="PXF40_000364"
     CDS             complement(10182..10640)
                     /gene="ssb"
                     /locus_tag="PXF40_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5801741.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDTTAKISVATSTEWTDKVS
                     GDKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSSSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIPF"
     gene            complement(10643..10840)
                     /locus_tag="PXF40_000365"
     CDS             complement(10643..10840)
                     /locus_tag="PXF40_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801742.1"
                     /translation="MARKIDAGVEIVEVDKLFIAKFFYDGKLQHTTYPQYSRQNAIML
                     INRKIERFNVGRDKPIKLYKE"
     gene            complement(10824..11009)
                     /locus_tag="PXF40_000366"
     CDS             complement(10824..11009)
                     /locus_tag="PXF40_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801743.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGVWQ
                     VESNGNQYCGGKYGTKN"
     gene            11223..11498
                     /locus_tag="PXF40_000367"
     CDS             11223..11498
                     /locus_tag="PXF40_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801744.1"
                     /translation="MKNNILITYDLNKSGQNYAALIEKIKTLGAWAKVQQSAWYLHTS
                     YSSKEVLEMLSTVTDYNDSLFVAQLSEANWRGLSNEVSKFIQEQWWK"
     gene            complement(11501..11752)
                     /locus_tag="PXF40_000368"
     CDS             complement(11501..11752)
                     /locus_tag="PXF40_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801745.1"
                     /translation="MKNKNFEIAKVVILNEQLGSPKDLELKVVENGLSDEDKYHIKQA
                     VLKAVENGCLDPEMLASRCCSAIETINKSGINTGNGSCE"
     gene            complement(12205..12435)
                     /locus_tag="PXF40_000369"
     CDS             complement(12205..12435)
                     /locus_tag="PXF40_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801746.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENETTQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            complement(12699..13811)
                     /locus_tag="PXF40_000370"
     CDS             complement(12699..13811)
                     /locus_tag="PXF40_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801747.1"
                     /translation="MKNNKTDTLLFLEQFARYLTAKSWQIAFELEYAVIWQKDLGHRI
                     LEVTLPKPIAEDREEVLQKALEKLAKIEEKNVETLKLNISNQYTDKLSVRVIGESVKD
                     GTIPLNEGVKLFEKTKHLINALALSAKKKKAAFGHNSGGKDVAEFMSQVRLGQTQIGS
                     YIVNLSYPVENIEIKEQNEIIQAISFSRSVSHNLVNSLNKLKEKITHYDHNPTIFAEL
                     IPEGVSHNLCEAIIGLSGSDQQRKIEIKLQVGEISDESMPSETFNIKFSQKEIKVIQV
                     ASRYYQGEYTLPHYEIIGKVVGLHSSNLADGGYIQVPCKIEDKTVDIRVDLPPEQYKL
                     AAEAHKTEQQIRCKGENLYINKKKGRLQKLTSINIL"
     gene            complement(13808..14311)
                     /locus_tag="PXF40_000371"
     CDS             complement(13808..14311)
                     /locus_tag="PXF40_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4365 domain-containing protein"
                     /protein_id="HDL5801748.1"
                     /translation="MLSPTQQMEQFNIAYVLAITANAGFNHAVPVVDNHSVDLAISAE
                     FPTEEGKRSDPEIKLQLKSEGDLHIKNGLVSYKLKKKNYDDLRKNCANPRYLIVCDLP
                     KKTTQWLSHKKKFMTLKRHCYWVSLKGFPATTNRSSVTLTFPENQRFTTDVLIKMIEY
                     ARVGETL"
     gene            complement(14316..15047)
                     /locus_tag="PXF40_000372"
     CDS             complement(14316..15047)
                     /locus_tag="PXF40_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5801749.1"
                     /translation="MRPLKEIRYDNLLRLIDEAKSTSDLANRTGIAVSYLLQIKNKNA
                     IQNGKPKGIGDKIAAKLEDGMNKPRGWLDQIHSEQSNLINSRIGNEEQKLQEQDLNDF
                     IIIDVLDVSASAGFGSSSELVEVVNQMRYVPEQFYSLFRNMAPRYIRIINLSGDSMYP
                     TFSSGDMLFVDISVNEFTGDGVYVFTYKGHLYVKRLQNTGDQILVISDNKLYEKWSIT
                     EENQDQLFIHARVKVHQSQQLNFIG"
     gene            15174..15398
                     /locus_tag="PXF40_000373"
     CDS             15174..15398
                     /locus_tag="PXF40_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5801750.1"
                     /translation="MQLQEYIEKSKWGEISRLAKAIDVAIPIVSFWVNGKRQVPAKRC
                     PEIEKFTEGKVTCEELRPDVDWAVLRNSGK"
     gene            15447..16208
                     /locus_tag="PXF40_000374"
     CDS             15447..16208
                     /locus_tag="PXF40_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HDL5801751.1"
                     /translation="MKSQSLLPITAQNASGAEVKISSIEIAELCEKQHKNVIVDIRKM
                     LAELKLNSADFSAQYQTKDGRMQPCYFLPKRETMILVSGYRIDLRAKIIDRLDELEKQ
                     HQPSIPKNYPEALRMAAELAEQNQVLLLEKQQTTAENHALKSYFEPGLTPAQFVKGLN
                     GVNSNKINDYLRSRGWLYKDKHCWRVFSHVRDKYLTESFKRIEVDPVERIEMATYKPI
                     LLEKGAVKIFEAYLQGKLPMKADWNGKYYHSKVAV"
     gene            16205..16996
                     /locus_tag="PXF40_000375"
     CDS             16205..16996
                     /locus_tag="PXF40_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5801752.1"
                     /translation="MSMLLMVKAMNCTVGNSARKLVLLKLADNANDDGVCFPSYQFIA
                     DKCEMSKRSAISHIDELIKMGYVSKKSRKNKDGSSSNLYQLHLDAPSEKSALGGENFA
                     PGGSENSAPITSHSINQSINHNTSEQNSDGVDKKSKYRFSDNDMAVAKWIFKRVKQLA
                     PQTKESYLPNWANEVRLMVERDKHTHQEICSLFKFATEHHFWGRNILSVVSLRAKWDR
                     LNLERQSSLRPNNIHSATGNGDIQDTTGFSKGLVVDVGGGTKWEF"
     gene            16984..17619
                     /locus_tag="PXF40_000376"
     CDS             16984..17619
                     /locus_tag="PXF40_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5801753.1"
                     /translation="MGILATTTQNQVLPVEIVEQAEVETTKIFNRLKATHLGWRANIK
                     SQAEYDNARREWVRLLIENRLTPKEVERGLKIADTDKNPYLPSFGQFLEWCKSIDYAE
                     LGLPDMDQFLKRLNHFSAFGFTEIDNFKFRSNAEYWLLTDLYERNRKHSWKDETLRNQ
                     AEKALVEMAKRIMSGEQIPPPKPVIEEKKKVPIDPRIQRILDEKKQAGAMQ"
     gene            17616..18188
                     /locus_tag="PXF40_000377"
     CDS             17616..18188
                     /locus_tag="PXF40_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5801754.1"
                     /translation="MTDFDKDTYQTPNYVRNWLNHRYAWFHIDGCSNGKNALYSHWIG
                     KAAEGLDEDTLSGQIAEDFLAENLLDVILECVADWGELLRIFVNPPYSNPLPFVQRAA
                     ELKKAGHIVVMLLPADKSTRWYQVIQENASEVIDIIGGRINFINPLTDEEVKGNSKGS
                     MVAVFDPFVEGIVTRQMPLDKIKELGGYEK"
     gene            18258..19286
                     /locus_tag="PXF40_000378"
     CDS             18258..19286
                     /locus_tag="PXF40_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL5801755.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSLAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAEFAKSAKVRSTLNQRDKYSNDLPYTRFVKSIQTCQC
                     RDGKYCHHEKVFVENEKGAVQLCWYHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSSAIEFADLVLFASIKGLLDELDSNALQQFLGYPPLNNSGVSKESNIGFDDV
                     PNARANLKKWAETLKLKVEPEPLAAFMAKPKLQRFEWRKWLQFVKAQPCMCCGQQADD
                     PHHIIGYGGAMGSKQHDLFTLPLCRIHHDELHRNVGKFEQDYGSQLELLIKFLDRAIG
                     LGALEIDG"
     gene            19279..19638
                     /locus_tag="PXF40_000379"
     CDS             19279..19638
                     /locus_tag="PXF40_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HDL5801756.1"
                     /translation="MVELVLPYPPSVNDYWRWVSKTRRVVCKRGKDYQWATFLAAQNK
                     PKFGGQVEIKCDVYFPDNRDRDLDNLGKCILDSLVYSKVIVDDSRHYVKKLTFEDKGN
                     QKGGAVIVRIKERLDVN"
     gene            19628..19987
                     /locus_tag="PXF40_000380"
     CDS             19628..19987
                     /locus_tag="PXF40_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801757.1"
                     /translation="MLIDIKGILRFWGYSANGRLGTEFPCVAAGMKPAVSASNHRILR
                     LTDESIFEIDRCIKQLKEQEPQQYEVLIGRYAARVSDTQIEKVLGISHSTFKRELAQA
                     EMYVLGVVVGLKLALVV"
     gene            20067..20873
                     /locus_tag="PXF40_000381"
     CDS             20067..20873
                     /locus_tag="PXF40_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5801758.1"
                     /translation="MKKLVLVTALSLVLSACGSGGGGGSSASNPNKEATPQSPSKSET
                     KSDTSSQNQVKGALSKVSADLQEQVKALKQINVDGRIIELAQEPIGFIEKDLDNGKKG
                     KAYNLAYSSIGYVLPKDVKTDEYGRVIDERASANDVGIFGLATKFQDLPKSGTAHYSG
                     VSFGANSEGKLTLTADFGDKKVNGSITERKLLSNNQALSSINLLSAPISQTKFAGEEI
                     HFAGIAQANVEGNIVQAPYGGKFMGPKAEEVVGFVADDHNDPYEVFAGQK"
     gene            21037..21384
                     /locus_tag="PXF40_000382"
     CDS             21037..21384
                     /locus_tag="PXF40_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin, lambda family"
                     /protein_id="HDL5801759.1"
                     /translation="MPEKNPDIYTQAWNYFAMFVSNHSSFICAVIIAFFTSITKSFLY
                     GKTDTPKRVFAEAILCAVIAGSLRPILIYFNADVSLITPIGAGIGLLGTSAIRQMILK
                     FLNKKAGVDDNVN"
     gene            21374..21970
                     /locus_tag="PXF40_000383"
     CDS             21374..21970
                     /locus_tag="PXF40_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 19 protein"
                     /protein_id="HDL5801760.1"
                     /translation="MLISERKFKQVFPSAIDGIYAEIAKHIEKAGCKTKEQQAMFLAQ
                     CGVECAGYKTFEENLNYSATALLATFPKYFTQHNVVLYARDKRAIANRVYANRMGNGN
                     EQSGDGWKYRGRGLIQITGKANYIEFAKWEGLPSLVTSPDQITDNLALTVQVAVWYWQ
                     SRKLASYGSDILKVTKLINGGTHGLSQRTNYYQRLMVA"
     gene            21971..22321
                     /locus_tag="PXF40_000384"
     CDS             21971..22321
                     /locus_tag="PXF40_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL5801761.1"
                     /translation="MSKYIYLVATILILGLCGWIWQQSKQINTLRAENQTQAQTIEQQ
                     QKANQRLADKLEQERQAVEKIRKSANEMRNKVEIVQNEIKSILAQDSCAKADLPNGVA
                     DSIKRLHRQNNHKH"
     gene            22326..22499
                     /locus_tag="PXF40_000385"
     CDS             22326..22499
                     /locus_tag="PXF40_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801762.1"
                     /translation="MYPPAAYLVPCERTEFSGNTYGDTVEYLIKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            22635..23033
                     /locus_tag="PXF40_000386"
     CDS             22635..23033
                     /locus_tag="PXF40_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801763.1"
                     /translation="MIVKLKLGAVVVLSQVKQATIAYAGSEAYQTAIEQAKKGLLDED
                     KGKPFETVLHFPAVYADEDGQEEICPEQIATTVRSDNVSGEPVAVVLIPDDNVVGELQ
                     SIFIYKTDYAEIFTDNGVKLSAVRTSPAPR"
     gene            23181..23657
                     /locus_tag="PXF40_000387"
     CDS             23181..23657
                     /locus_tag="PXF40_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1441 family protein"
                     /protein_id="HDL5801764.1"
                     /translation="MDNLFDLKLNINQIAELTGLHRQTVSQRVAGLNPALGSNSKLKL
                     YALRDLILTGLAEKMSADVDSLSPADRRAWFQSENERLKFEKEIGELIPASEVALEMS
                     ALAKTVVQALETLPDILERDCGLQPKDLIRVQQVTDDVRDQMALHIQEVTTDTENE"
     gene            23657..25768
                     /locus_tag="PXF40_000388"
     CDS             23657..25768
                     /locus_tag="PXF40_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010786315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
                     /protein_id="HDL5801765.1"
                     /translation="MFASAKEIRRDIANAIKAPRRMRVSEAVAEYMRVPLGGGNSVKW
                     DKHTAAYMLEPMDCLNSREYDAVIFVGPARTGKTIGLIDGWITYSIICDPSDFLLVQL
                     TQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVLS
                     SSDYKYVALTDYDRWPEDVDGEGDGFSLASKRTTTFMSAGMTLVESSPGKDIVDLKHI
                     PKSTHEAPPTTGILSLYNRGDRRRFYWQCPDCSEYFEPSMANMVGYREDSDFVKASEN
                     ARLQCPHCQTLIAPELKRELNIKGVWLKEGQKIDASGQISGESRKSRIASFWLEGPAA
                     AYQTWAQLTYKLLNAEHEYEMTGSEETLKAVTNTDWGLPYLPRSALEQRRSDELMERR
                     EEVEEKTVPAQCRFIVAAVDVQGGKNRRFVVQMVGYGENGERWLIDRYNISHTLPDSD
                     GVIEKIDPRIPDDWYILISDVLEKRYPLAHNPNHFMPILAMAVDSGGEDGVTDNAYQF
                     WRKCRRDGYAKRVYLVKGDSTKRQKLITKTYPDNTARSDRHSSARGDVPLYLLQTDYL
                     KDRINNALFRDTVGANYIHFPDWLGEWFFNELTYEERGADGKWRKPGKGNNEAFDLFC
                     YAHAIAILRGYERIKWGDENDVPSWAKLPDINPNIIRETPRTAEQAVEIEEKSEKPQP
                     KPTKAKSSWLSGGGRKTGGWL"
     gene            25765..25989
                     /locus_tag="PXF40_000389"
     CDS             25765..25989
                     /locus_tag="PXF40_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801766.1"
                     /translation="MSLYTIDELKQKIRTLDEKIETAQSQVSFNGRSVSYQVAELTKQ
                     RDRYQTMLDEQLAQSGQRTKQHRIKYARFI"
     gene            25989..27488
                     /locus_tag="PXF40_000390"
     CDS             25989..27488
                     /locus_tag="PXF40_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HDL5801767.1"
                     /translation="MNFLEKTIATLSPKWAANRSRNRYVLNAYEAAQPSRTHKASRES
                     KGANSTVRQSAVSLREQARALDQNHDIVIGILDKMEERVIGSKGIHIEPQPLTLAGEV
                     HEELAGQIRKLWAEWSVKPDVTGLYTRPLLERMLLRTWLRDGEVFVQLVKGKVAGLEH
                     GSQVAFSLEALEPDFVPMQSDEAKNGLVQGVFLNAWRKPTAYQVYLDNPQESNGMYGK
                     VKTVPADNMLHLAFRKRLHQIRGVSMLHGVIVRLADLKEYEESERVAARIAAAMTMYI
                     KKGDAALYDDDSNSDGERLFDIAPGAVIDDLKPGEDIGLINSNRPNVNLETFRNGQLR
                     ATAAGTRSSYSSIARDYNGTYSAQRQELVESFEGYAVLQDAFVAAISRPIYREWLKMA
                     IASQAIKLPPDIDQNSLFNAVYSGPVMPWIDPIKEANAWKERIKGGLATEGQAIRASG
                     NNPAEVKRQRIVEIKENQAEGLKFDTDLTNYGGQDKSFSNQKDEINEDE"
     gene            27500..29461
                     /locus_tag="PXF40_000391"
     CDS             27500..29461
                     /locus_tag="PXF40_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HDL5801768.1"
                     /translation="MKTWFNIQAKANDTAEISIFDEIGFWGVTAQQFAKDLKALGNNL
                     KQINLHIHSPGGDVFDGIAIYNLLKNHPANKTVYIDGLAASMASVIAMAGDEIIMPEN
                     AMMMIHKPWGIQGGDADDMRKYADLLDKVESTLIMAYVAKTGKYETDLAEMLKEETWL
                     TGKECVEQGFADKLAEPLVAMACIQSKKLEDYTKMPDKIKNMLFAPQGNAGANPKHEQ
                     PQTPPQAGENPQNVAKPDAMVALAQRNATIKATFAAFGTQFDGLLAECLADVSMTAEQ
                     AKDKLLAKLGENTTPSVPQNHIHAGNGNIVGDSVKQSLMARAGQDTDKTNARDNAYNA
                     MTLRELARASLVDRGVGIAGYTPMQMVGLAFTHSSSDFGQILIDVAHKSLLKGWETAT
                     ENYEQFTTRGTLTDFRPAKRVGLGEFGYLPEVGEGEEYTYGTIGDEGASVALATYGQL
                     FSITRQAIINDDMHLLTKIPEKMGAAAKATITKLVFALITGNATAQDGKKLFDATHKN
                     SLTGAALNVENIDKAIQLMNGFVNSRGEPLSIEPEFMLLPTSLHTKAKQILGSSSVEG
                     ADINSGIINPIRDIVSPIKSPRLQIADPKSWYLLNKEAIEVSYLDGVDSPYIEQQHGF
                     TVDGVSTKVRIDAGVNVIDYRGVVKVTNA"
     gene            29535..29858
                     /locus_tag="PXF40_000392"
     CDS             29535..29858
                     /locus_tag="PXF40_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2190 family protein"
                     /protein_id="HDL5801769.1"
                     /translation="MAKNYIQDGNTVRLTATKAITSGDVIVAEDLIAIAVSDAAKNDA
                     VVGLTTGVFSVKAKQADDIKQGAVLYWSETEGATLTAGSNKRLGIAWKDSGTSSNQVD
                     VKINV"
     gene            29851..30153
                     /locus_tag="PXF40_000393"
     CDS             29851..30153
                     /locus_tag="PXF40_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801770.1"
                     /translation="MSSPFEQAIAAADQTIQQTMMSEWLIGGKPYPATFDEAPAIFNG
                     LHSTDDRAIHGTERTLTLFRASGYKPRLDDRVSGNGKKYLVKSYHFVDQLIVLQLE"
     gene            30157..30681
                     /locus_tag="PXF40_000394"
     CDS             30157..30681
                     /locus_tag="PXF40_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801771.1"
                     /translation="MGSQVTGLKELQASLKKIARQTVPKAAAQAIRTVGRQAMNKAVK
                     SVAAEIGVNQKTIKGRAKMTAKPTPSRLQATIKVNRSHMPMIRVLERKSNRLSPTKGS
                     IRVGKHTVQRGFRQRLANGRTHIMYRQGRKRYGIDVAKVPLSQPLTQAFDRELKNYPE
                     QVQAELAKQIAGKL"
     gene            30678..31073
                     /locus_tag="PXF40_000395"
     CDS             30678..31073
                     /locus_tag="PXF40_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801772.1"
                     /translation="MKIHTKIRKEVLELLQTKLPEIDNFYNGLPTFIDIEEEQLAVSV
                     YLDDISLQEITVCNNQWDAKLNITIHLKSTESAEDELDEWAEKIREIIDDYPEFEHLE
                     SVALSQYQYEQDQNQRTWHMATLIFDVEY"
     gene            31101..31742
                     /locus_tag="PXF40_000396"
     CDS             31101..31742
                     /locus_tag="PXF40_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801773.1"
                     /translation="MAKTTKVQGTKFRISVGREAQKAITAINLNTATLTIASSGYKKG
                     DAIELTGCGQLDGIYPVLSVTTDQVKLCEEVNWTGKDLPANYTKAKAALVQYSEQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPTTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            31826..32227
                     /locus_tag="PXF40_000397"
     CDS             31826..32227
                     /locus_tag="PXF40_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801774.1"
                     /translation="MTLREKLLANKPKLQPIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGVLLFNPLDINDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            32272..32502
                     /locus_tag="PXF40_000398"
     CDS             32272..32502
                     /locus_tag="PXF40_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL5801775.1"
                     /translation="MPERHFAEYRLFYQEQPFGLWRDDYRTAQLAHLTAMFNRDPKGK
                     APKLAEFMPFFNRTDEVEEIEDDGVADYLAKR"
     gene            32565..32792
                     /locus_tag="PXF40_000399"
     CDS             32565..32792
                     /locus_tag="PXF40_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801776.1"
                     /translation="MFEALDRFMINTIKIAIIVFLVACIFISMPNWWIASILVLFPTA
                     YLLDKYWWRNTEMYRRKMDKLVEEMKNNRQI"
     gene            32846..36397
                     /locus_tag="PXF40_000400"
     CDS             32846..36397
                     /locus_tag="PXF40_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5801777.1"
                     /translation="MSSSNRLTITLDVENSKLLAGFAQSDTVANKFARSFIVNMDQAQ
                     QKARQFADRSTKYLKNIEQAANNLNSSVSKERFWQIANRLQFPTSKVISYANSYTELG
                     NKLKLVTESESQHARAMAAVYDISLKTAQSTQATSSVYQTFAQNAKQLGISQNDVAKL
                     TETVAKSVAISGASSATASNALVQFSQSLLMGKLKAQEFNSLMTQTPSVIQAIAKGLG
                     ITTAELKAMVDNGEMSAEKMIEGLKKAESYVNGQYAKTTTTISGAMQNLSTAAEKWVG
                     EMDSTVGASQKAVAVLNALNAHFDTFAKTALVAGGAFVLFKGYMSVRPFIEARAAIYE
                     NRKAIIAENQARQQTIATRQQELVVLSQQTALKLEQTLQTYNQNKAELEAIAVKQQKI
                     TKEREEIAVAIQAAATRTERLALSAELQALDQKEIALGQQKIAVERQQIATKQALKVA
                     YAENAVAQSAMNAGMVTATTTTRAMNGVLAAARAELNLLKAAALSNPLMTLAMVATTA
                     GTALWGFFESQKAAREEALRYADSLDSVRANIEKMTKAQTDAEMVKLSRSIKEQETAL
                     ASLKQRQAELTREIEQGATVLDDAFGAGVRFEKSAKELAKAQEELKLVTADVEKAQNT
                     LNASLEAQEALQAHVPIANLREEFVKLYPHIDESQIKVDGLNIAIGNFTVKSPEMVIA
                     ANNIANALGGVAGEAMRAAILVANLSSMKLDANGAAIIDPKHLEKIEQIERNNAIASA
                     KGKDKIALQVKDALIKSGMKEGDAGYERLKAAYEQQFTLQNAPKRGGKPKKTKAERSA
                     ESYQNQVAEMTNRLSGLKIDKEDLVKYGGISQYQEVRKLTEDIALNAEKYKNYGTEGV
                     AKLKELAAKIDSEQQLLDIEQFQVDHDKKLEAMQFELDLLGKTRTEKELLQFNNQLDL
                     EAERLKINMTKENIALLDQKIAKIKEEYELHQKKQEETRASVMMGIKEGWNNIETDVS
                     NVAANVANITQNTFDGMADSLTNFVMTGKADFRSFANSILSDLSKMIIKMMLFNAIKQ
                     GATMLFGYQGPTTTVNGNAVYGLGTWATGGYTGNGGKYTPAGIVHKGEYVITKEATSR
                     LGLDYLNYLNYGRRGFASGGGVAVPRVPSSSYQPKSAQSSISVQVINNGEPVDAKVSQ
                     KQQGEQTQITVELMRKIARQEANGMIQNNFRAGGVFA"
     gene            36397..36726
                     /locus_tag="PXF40_000401"
     CDS             36397..36726
                     /locus_tag="PXF40_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801778.1"
                     /translation="METLQWCVRTDLAVENTPEIMEVKFGDGYTQRSPKGLNNLLRAY
                     TGTIKVKKGEHLAVEAFFAKHRGVSPFYFKDPYTQQNKKVVCSSWPAKMVGLNHWEFS
                     VTFKEVP"
     gene            36726..37442
                     /locus_tag="PXF40_000402"
     CDS             36726..37442
                     /locus_tag="PXF40_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5801779.1"
                     /translation="MPVSISNQMKLDLAKLEQNAMLDLYEVDLRTLKDKSGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSVNKLG"
     gene            37446..38177
                     /locus_tag="PXF40_000403"
     CDS             37446..38177
                     /locus_tag="PXF40_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5801780.1"
                     /translation="MELEQQIIDYALQHEPHEMCGFVVFDGNKNRFIPCENQAEDKAN
                     YFEISDLDYIKAEEKGELVAVVHSHPEPNGKPILSVLDRKMQVQTGLDWWLVHNRQIH
                     KFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFDRQDDWWHTGQNLYLDNIQG
                     QGFERVGTPQIGDVILMQVGADVPNHAAIYIGEQMVIHHSPNRLSKRDLYDGYWLRHT
                     HSIWRHKLADKLDFDGILNDIAVNN"
     gene            38446..39036
                     /locus_tag="PXF40_000404"
     CDS             38446..39036
                     /locus_tag="PXF40_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5801781.1"
                     /translation="MITVKFYGHLRKFGTDFKLEVKDTAEAIRALCTQIRGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFQAVLGVALIGAA
                     FFLGPVGWGVLGASSAMMMGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETMTVEV"
     gene            39039..>39415
                     /locus_tag="PXF40_000405"
     CDS             39039..>39415
                     /locus_tag="PXF40_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801782.1"
                     /translation="MGLFSRKRKNHTPKEAPETGRSKQIVNIVELLCEGEIEGLVDGF
                     KSIYLDGTKIQNDDDSYNFNNVSGQLNVGTQDQEVLEGYDSSQNEVSVGVEVKKKNGA
                     IVRTVTDERISRLRLTLGVRSLF"
BASE COUNT        11607 a         7946 c         8598 g        11264 t
ORIGIN      
        1 acttatcttt caatctatta taagtgattt ttatgtaaac gttccgaaaa aatgcaaaat
       61 gttccgaaac tgtcttttaa gactggtgtt ttgaggaggg aacactttct ttgatagggg
      121 ttactattgg ggcttttcga atgtatgttt tggtcatttg aacgctagta tgacctagtt
      181 gttggcgagc ggcttcttca cctagagaaa gggctttatc tgttcctgat ttagctctta
      241 gatcccgaaa ttggaatgcc attatttcat ttgcgtattc cgggttattc ttgaccgctt
      301 gttcccgaat ataagtgaac cttttaccta gttttctagc ggttagcttt tcccctttct
      361 tagtgctgaa taagtgtgtt ccagtagctt tctccagcct atcttggata atatcagcca
      421 gttttcccac tatctcaata cgtagtttgg cttgtgtttt ttgctgaaca atatggagat
      481 aaccatcaaa aatgtgttct ttccggatat tgaccaaatc gacaggacgt tgtccggtga
      541 tataggcgag atccattaag tctctcatat cctgatctgc cacttcatat accatctgaa
      601 atatattgtt ctcaacgtaa atttcacgct ttctgatagg gtagcgtttc attccgatat
      661 tagggcttgg taagtttgta taaccccact ctcgagcgta ttgccaaata tgactgaaca
      721 ttgaaaattc gttattagca gatcccggtg tgtcttttcg ccaagtcata tactctcgga
      781 tatgttgagg ggtgatttct tcgagaggag cgtcattaaa gaatagcagt agatttttta
      841 tcttgcacaa atctgtttgt gctgtgctcg cttttttctg aggtataact tcatctcgat
      901 aacgtttggc tacaagcccg aaggtaattc tggcagtttg gctttctctt tctatattga
      961 gttgagcagc cttaataaaa gcctcatttc tatttgtgcc tagagagatt tccgtttttc
     1021 cgtgcgtgcg atatagccaa taaatgacag ttttgcctga ttttcgtgta actgtttttg
     1081 gacgtaaatt ctcaggtaag tagcgattct gttgtttgcg tggtcttccc atttttcact
     1141 cccattaaat aagcaggtga tttccatttc ccagtggatt gagcttctgg atattgttgg
     1201 cgggggtgcc catagacatc tttgtatagc actaatggct tatacttgtt ttcatcttga
     1261 attatatagt gacgctccct caaccattcg atttgtcttt tcttttgacg atagcctgtt
     1321 aaatcagcaa gttcgtcttt cgttaaaaat tcagtaggtt gttccatatt ctctccaaat
     1381 aaccccctca tttagaggga ttgagttaaa taatcgttaa gcctttgtcc tatccaccgc
     1441 atacaaggga cggccattat aacttttgcc atatgtaacc cttgtgcgtt ttgcgtttac
     1501 cctgaatgca aaggctgatt tttgaatgtg agaaaccatc tttacctgca cttgtcattg
     1561 aggtgtattt tttgaataat ttcccgtcca gagttattgc ggcaacagga actgagcaac
     1621 tctcaatatt catttttttc atcctctcgg actgcttgct aaaacctcca agtcttgagc
     1681 aatgcaacat attttctgag cgtgtacacc actctaaatt ttcaggtcgg ttatttgttt
     1741 tgtctctgtc cttatgattt acatgtagat ctggataacc gtgaaaagtt tcgcatacca
     1801 gtctatggat taaatagtct tttactccat tctcatctac aagctgaact cttaaataac
     1861 cattctttaa aggtctaggt tttaagattt tgttgctcaa gaaactaaaa atttctccat
     1921 tctcggtagc tgcatagttt tcattgcgag gtaagatacg cacttaatct ctctcctatc
     1981 catttcatta catttgtaca catcgaattt cctatcgcct tatatcgtgg gctatcaggg
     2041 cattcttcgg cagatttgcc acggtatgtg attttcgtcc agccgtctgg aaagccttgt
     2101 agtctctcgc attcggtggg agtaagtttt cgaatagttg ttccagcact gacagcgtga
     2161 acatcagttc gggtaagcat gtaacttaca ccactctcat caaatacgtt gccgtttccg
     2221 tcgttttgtg gctgtctgcc gatagtatta ccggcaaggg caatacaagg gatattattt
     2281 ccacccgtcc ccattcttgc tttcagtgtt ggcgttttgt cctgaatttc gctaattcgt
     2341 acagcttcag caccttttac ttcaaataag acgttctctt gcccgttgtt tcgacctaaa
     2401 caatgagctt tgttttggct gataattgga tcttgcgtac cgtgaacaac tagcgtctca
     2461 ctcccgccac tcaaagcctc cccctgatgc tttaactgta ccgcctttgt cagattggca
     2521 gttatggaca acggcattat ttaagatgta gctgttgtca tctgccacct caatgttata
     2581 aacaacttca tttccagtta tctcaaagga ttgcacgctt ctcaataatc tattttcatc
     2641 aaggcgactt tttcttgatg tcgattggag gaacgctcgc atttgataat agtcattctg
     2701 attgacaatt cttccttgga tttcttttgt cggagcaaca gttactttgg aaacagatga
     2761 gatatatcct aaggtttggg ataatgcagc aatgccgtaa gcaagggatt tcgaaatgct
     2821 atttgcggta taaactccgt ttctaaaaga gccatcggta atcatatacc cttcaaaaat
     2881 tttacttctg aaagaatgag ataaacacca agccggtata gtttttccgc cggctttctc
     2941 accaaattgc gaataaagaa aatcagcaag ttcagtgtca caaatagtga ttttaattac
     3001 cgaattattt tcggtagtaa tatgatgagg aagtttggca aaagaaagag aaaacttccg
     3061 atatttctct ttatttacag aaataacaac agctttttta tttttgcctt tccatcttct
     3121 tatccagcca tcaccaagat aataaccggc aattagaagg acttcgtcat cagtcagttt
     3181 gctatgaaaa ccaccatagg gcataactga aaaatcagtt aatgataccc attgatagcc
     3241 ctctagctta tgagcctcaa tccactcagg tttggaaatg atagttttcc tatggtattt
     3301 tccattcctt ttggtgttta tcgtttgcca tttttgagca taaaaaggat gttcaggggt
     3361 gcaaacgatt gattcaggta agccaacagc cgttaatttt ccaactggtt ttatttcact
     3421 gccaacacgc aaaataggtt ttagttgtcc tttatgagta acaactaaat ctccgacaga
     3481 aagtgtttcg attggcatat atcctttatc cgttaaaacc atatgcccag cggtaaagca
     3541 aggcgtaccc ccaaccaaca catcaggagc aggaatttta cgattgagga ttttttcagg
     3601 tagggcggtc atatcgccca agttcggcac atcggggaaa cggtgagcaa gcactgcaca
     3661 cggaaacggc tcaatctcgc tgaaccataa cggcgtaccg atgtcgtgcc acgctacact
     3721 tgctgcctca atgccggagc agatagatcc ataggtgaat tttattatgt tgttcataca
     3781 atcttctccg cctgcaccgc aacgcaaata tcatcaataa atgcgttaaa agtgcggcgt
     3841 aattctggtt caaaaaattc tgcgatcagc ttggataagc gaacctcgcc gacaattcgt
     3901 tcaatcgctt gctctcgggc aaacgcctct aattcaagcg gttttatctc ttcttgtggc
     3961 ggtggtggcg gttggatact ttcccaatga tcaggtctaa ttttccattt atcagcacaa
     4021 atttgttgaa tttgcccacc agcacaatcg attaactccc gagagcaatc atcggtcgtt
     4081 ttggttttgt ctaccaccaa gaataggact tcaatcgggg tatcctcaaa ggcgttttgg
     4141 atgcggttga gttctacaag ttgattgcca acttcttctc gaaagcgttt ttctgtttgg
     4201 cggtagccaa cgccgggaaa gagaatgaaa aatccccatt ggtgactatt tgccagtcct
     4261 tttaggacga aaatatcatc aaccacccca gattttttcc acggaaattc ggattgaatt
     4321 tgtgcttgtt cggcttggct taaatcctta aatttaaggg aaaatggcgg attcataatc
     4381 acgcaatcgc acggttcgcc gttaggatag agaaagaagc tctgattata gatttgagcc
     4441 gtagggaaat tgtgccgtaa cacatcgcag ctttcggatt ggacctctac cgcagtaaaa
     4501 gaggttgggc ggacaaattg ctccaactgc ccagaacctg ccgccccgtc aaaaacagaa
     4561 acattatttc tggcatactg cttgaccttt tcagcaacat aacggcgtag agcttcacct
     4621 gtgatgtatt cagcgaattt gtcggctttt ttgcggttat tgtgttcttg gaattgcatt
     4681 tttcctccaa aaaataaccg cttgcggaac aagcggttgg gttaattagc gttgagctgt
     4741 acaaattttg ccatcgcagt cgttgcgtaa ctctagatgg tcagcagcaa ctgcaaaggc
     4801 ggttaaaaag agtatgattt ttgcgtattt catcgtctaa tcctcaaaat ttgggtgcag
     4861 gaaaccgccg cttgatgttt cgcaagcggt cgggttttat aattttttgt gattagaacg
     4921 ttggcttttt aaatgccggg tcgaaacctc gaacgtgttt gagtactcgc cagtttgtca
     4981 tcgggtcgta atcaaattct ttggtaatcc gttcaagaat tttatgagcc gattgtgcgg
     5041 tgtggctata ttcaaaaccc tgtccgtaga tttcaggtgc gatatttgag ccgagttttt
     5101 gaaacatcgg gtagatatag cggaaagtgt gaatgccacg cacgaaagcg aaccaagccc
     5161 atatgaggct ttggagttca tcttcggtaa agtcgaaaga gtatttcttt ggcggtggtg
     5221 caagcggtag gttttgctga ttattttgca acgcatattt accagtcttg cgaatttgtg
     5281 gcagaacttc ttcaaatacc cacgcttcaa acttttccgc ttctggtttg cgtgatttga
     5341 taatcagtcg gtataggttt ggttcgttga tgaagatcgc tttttgttgt ctctgcattt
     5401 tatcggtgag gtatcgtttc gataccccat tttctttaca gtgtttttgc agagtaaggc
     5461 tttcatttac ataacctaaa attcggcaaa catctgcacc gcaaaaccac ggttcttgat
     5521 ttggatcgat aatgacacga acagcagatg aattgaaatt gaaaacaggg aattgaactt
     5581 gatttgacat tttttgtacc ttttggattt aagtatttaa tccgatcatt aagtgggtga
     5641 tcggggttca acttaccctc caaaagatgg gcggagctta ttcagatgta ttgtatatcg
     5701 ctctctcgcc ccgatcattt cggattaaac ctaaaattta ggtacaaaaa aaccgcttta
     5761 tatcggaggc ggaaaccgct tttggaaagt aagtgtggtt atcttagccg aaagggcggt
     5821 tttttgtcaa ttagatttta ttcttcaatt agcaatggct tttctttcag ttcttcaatc
     5881 gctctggttt gtaacagcga gctcatttgc tgaatagcca aacggttgag cattgccagt
     5941 cgctcttctt ggctgtaacc ttgctcaatt agtagggcgt tttggctttc caatgcagca
     6001 aggacggtaa gttgctcaac ggtagcgtgg tctcgcatat tgcctttcag gttcggattg
     6061 cggtctttcc actgttttgc cgtttgtccg aagagagctt gattgagaat gtccgcttcg
     6121 ctggaataaa cgaaagtatg ttgttttgta ttcagcaatg ccggtatgat gtgagctttg
     6181 atggcatcag tatgaatgcg gtagttcgcc ttgcttaaaa tgcgttttac gctccattcg
     6241 agcttacttt cgttcgcttc ttgctgtttg agtcgttgga actctttgat gagataaagc
     6301 ttaaattctg gactgagcca agaaccaaat tcgagagcaa tatctttgtg ggcgtaagtg
     6361 ccgctaccat atcgtcctgc ttttgctact agcccaatag ctcccgttgc agtccatttt
     6421 ttgacagaca tcacaaagcg gtttaagccg atgttgtttt taatttggtg taattccacc
     6481 aaattaaaat ttggattatt cagctcttcc caaacttgaa gaaattcaat ggtattttta
     6541 ttttgaagcc agtttttaat gagctggtca ctgtctccaa aagctttgca catatcagtt
     6601 aggctgatgt aatcctcacc atcacgagcg gttactttga cctccacgcc ttgtacaatc
     6661 attacgctat ttgccatttc gtttctccgt ttttaggtac aaaaaaagcc gttggtggac
     6721 ggcttgaaag tgcggttatc ttaatccgaa ttgggggcgg tgtcaattag attaatccgt
     6781 ataagtatgg aaccaagtta aagagtagaa ctacaacaca taaccaaaaa atgaaattca
     6841 tatcttgctc agttttgatt ttgtgtaaaa tacgcttaag tttgtttttc atttaggaaa
     6901 cctttaatgt ttagtttatt gcgtgatgct ttaacctttg ctgcaatgtt tacagggatt
     6961 ttatttcctg caattattca taaatacgat ctatcacttg gtacacaaat ccaattactt
     7021 agctttgttc cagctttctt tgtgttgtgc cattttctta ttaagcgaaa atatcaacgt
     7081 gattttgaca gactttcgta tttatctgct gtggtttgcg tagcaatgtg tgcaggcgtt
     7141 ggagcattta gccaatcaga aatgattgag ctaggtttta aagttgagcg tgttcttgat
     7201 tatgtgacta tcaaattctt actctacttt tggagcttgc tgttattgcc agttgtgcta
     7261 agaaaattgt ttgggaaaga ttagttggtt atttaaagag agctatttgt caaacctcaa
     7321 tatctatttt tgcgatctgc atcgaaaaaa taaattttcg ttctgacagt aaaacgcttt
     7381 cgtagtaatc tcataaaaaa cataagggga acactatgaa agagcttttc aaacaatggc
     7441 taatcaatca ggactcgcca ttcattaata gctgtggcgt tgagtgtatt ttgtcaaaag
     7501 ttgatgactg gctaaacata atcaacgcca acgaagaaga aaccgaaacg cttgttgagt
     7561 ggctaaatgc ttttctgcaa gaggtttctg tttttgtggc ttaggtacta taaatcttct
     7621 gctttcacaa acacgccatc aatcattttt ccttttcgat ttttgatttg aatataagca
     7681 tagaggagag ctgtttgtac gtctgttttg tagaattgag cgataagatc aagctgattt
     7741 tcaaagccgc ttaagtaatc ttctaatcga gataaatcac aacctctaga taactcactt
     7801 gctacattac ctaaatcaat attggcctga acaatctgag ccgcaactcc acaattaaaa
     7861 ttggtattat cgcaatggct aatgctaaac agtttttcca ttttgagctg tttacgcata
     7921 atcgtacaaa tcactagaca gtcacctaga ctgtctaaaa tagtttcaaa ttcattggtt
     7981 gctacacctg cacataattc cccaaactct tccattagtt ttaacatttg cttttgtggg
     8041 gtagagccgt taattaaatt gcggtcttcc gcccattgtt cgatgttttt aattagttgt
     8101 tgcattgttt agtcctctca tttctttcat tgcttcatca atcgccgtgc gtaaatcggc
     8161 atttcttgcc atacggaaat gctggctgtt ttcagcgtga ttactaataa caaattcgtc
     8221 tgataagcca ttgtagcgga tttccatttt gtgctttttg ataaaatcta agcgtttggt
     8281 gtctgtcatt ggttgtcctt tggcagcttt ggaagtggtt gccagtgggt tactgcaatc
     8341 acatcgtcat caagcccata ttgatttaca ctaagaaaat accactcgtt atcggcaagt
     8401 tctcttgaaa ctattaaaat taactgcatt cctgaaatat cgcataaccc tagcacatcc
     8461 gtttcaatag gtggtaattt gtcctcaatg gatatccagc cattattttc tacaagtgtt
     8521 ggtggttcaa taacttgttc aacttcccca aataactctg attctctttc ttcgtcggtt
     8581 agtgggcgga tatctgattt tgctctacct aaaacaacac cataaactgc atagggtaaa
     8641 tcataggctt catagctttc gtgatcatcc atgtcacccg caaactcata ggcttcagta
     8701 gcaccattta aacagctttg ttttgcttgc tctaaggttt cgtgcagatt taggatatgt
     8761 atatcatttg atacatccac cgaaaaaaat ttgtcttcat tcattttctt tctccaaaat
     8821 accaatagtt gagagaataa taaccgcttg tattcaacaa gcggtcaatt ttcattaaaa
     8881 acttacaagt aaacttataa gctaacttac aagctagatc tcaatcgtac cgatattgac
     8941 cttgattgat gtttcgctaa gtgcatcgga tagtttttcc gcaaactcag tcgcaatcgc
     9001 ctcttcaatt tgctcagctt gaactaagcg ggcggttaat accggctcac cgctaccggt
     9061 tagcacctgt acacgcagag taaatgatcg agtgtctaag ccgttatatg ggttgcaagt
     9121 aaatacaagg tgagttggta gttgcagtgt agatttagct tccaccgatt ccattgctga
     9181 ttttttggct gcgaaatcgc tgagttcatg ttcttcgttt cgggcgtagt caatcgtcat
     9241 tttacgcacc gcttggacgg catttttaat actgatttca tcttcgtggt ggtaagcggt
     9301 caagtagccg ccccaatctt cgaggaaatc agaaaaatca cgctgtgagc ggcgtgagcc
     9361 attaatttcg catagagctt tgtaggctgc ggttttcttc atcaccaaat tagcacgatg
     9421 tttagcgtga ccggcttgct ctcggttgcc catatcgaat acaatttccg cactcatttt
     9481 ctcttggtca ataaagcatt gtgcgttttc ttgggcattg gcggtagcat attcaatcag
     9541 gctaccaaaa cgttgcgttg aaaacgctgc acggaattga ttacggtgag cttggaaagg
     9601 ctctaaattt tgtaatttaa tgccttcagg taacattact gtgccaaaat cagtttgaac
     9661 ctctttagtc gcagctacag caagagtaga gatttgttga atagttgatt tatccatttt
     9721 gagttccttt ttgtttaagt aaaaataaag ccacgcatta acgtggcttg gattgaaaat
     9781 aattgattat gcagcagctt tagagagagc ctttaaaccg ctagggcttt cttttactgc
     9841 cgtttctgtt ttttcaggtg tagcagataa tgccccacct ttatgaacat acattggtgt
     9901 ggcggtagta tcttcttcgg ctgacttacc acgtttggtc ggtttgacat agctcaattt
     9961 gtgctgaatt tgaacagatg ggctgtcgct atccattttg tctaagctaa attcaaccgt
    10021 aactttccct ttcttatcgt gggttagtac gcctaacgcc acttctgaaa gagctgttgc
    10081 cagcttgtct ttgaaaatac cgcaatctaa ttcatctaag aattcaggta catttgtttt
    10141 tgccattttg ggttctccta attagggttt gaataaaatt attagaacgg aatatcatca
    10201 tcaaaatctc gtgattctga atccgtcatt acgtggttat atggattggt tggcggtggg
    10261 tttcctgccg gttcggttgc ccaattatta ttgctgtttc cgctgcttga gctaccaagc
    10321 atttgtagct gatcagcgat gatttcagtc gtccagcggt ctgtgccgtc ttgggcttgc
    10381 catttgcgag tacgtagttt gccctcaaca tagacttgtg agcctttttt caggtatttg
    10441 ccaataatgt cagctaaatt ccgaaaggcg ataatgctat gccactctgt ggcttgtttt
    10501 ttatcgcctg atactttatc tgtccattcg gtcgaagttg ctacgctgat tttggcggtt
    10561 gtatcgccgt ttggcattgt tcgcaattcc gggtcgttac ctaggcgacc gacaataatc
    10621 actttgttaa ttcctgccat tgttattcct tataaagttt aattggttta tctctgccaa
    10681 cgttgaaccg ctcaattttg cggttaatca acataattgc gttttggcgg ctgtattgtg
    10741 gataggttgt gtgctgtaat ttgccgtcat aaaaaaactt ggcgataaat agtttatcta
    10801 cctcaacaat ctcaacaccg gcatcaattt ttcgtgccat atttccctcc gcagtattga
    10861 ttgccattac tctcaacttg ccaaacgcct tgatttcgtt cgcatttgta acgttgcatt
    10921 tgtatgtggt cgtcataatc cattcgcccg acaatgccta atagcaaaat tagcaaggca
    10981 aatggggcaa gttgtttcat tttgttcata ggattgtcct ttagggttaa aaaaagccca
    11041 cgttttacgg tgggcaaatg gagcgacttg cgtctagttg tgggtattcc ggaacacact
    11101 tggtgaaata tgctttggaa taagtgcctt tctttatact tgtaaggctc aagtccctta
    11161 ttgcctctca caactctaag gaatataatc aaggctctca caactcaaat aaggattaag
    11221 ttatgaaaaa taatatttta attacttatg atttaaataa atcagggcaa aattacgcag
    11281 cactcattga aaaaattaaa actcttggag cttgggctaa agtacagcag tcagcttggt
    11341 atcttcatac ttcatattcc tcaaaagagg ttttagaaat gctaagcacc gtaactgatt
    11401 acaatgactc tctttttgtt gctcaattat ccgaggctaa ttggagagga ttatccaatg
    11461 aggttagtaa atttattcaa gaacaatggt ggaaatagac ctattcgcaa cttccattac
    11521 ctgtatttat tccgctttta ttgattgttt caattgcaga acaacatcgt gatgcaagca
    11581 tttctgggtc caagcaacca ttttctacag ctttaagtac agcctgtttg atatggtatt
    11641 tatcctcatc agacaggcca ttctctacaa cctttaattc caaatcttta gggcttccta
    11701 gttgttcatt taaaataaca actttcgcaa tttcaaaatt tttgtttttc ataattacct
    11761 cgtgtttaaa ttattccaaa acccactcat aataggcttt ggaataaatg cgtgtctgcc
    11821 cacgccgtcg cccgccctgc atttcgcctg ttcagtcggg tgctgcttgt atccgtactt
    11881 actcaaactt gagataagcg tgattgctta ggactgatac cagtgttgcc ttttcagctc
    11941 tccacacctt gcgagtgtgt tgcctaaacc ttgccacctc tgtttggcaa gtcgttcaaa
    12001 tttgtatgtc agggtctaac caaccttgcc gagtgataaa gcattacttt acaactgctc
    12061 gaggttgtta atatcgtccg cacaagcact aaattgttaa agaacatccc acagtctctg
    12121 cttatctctc ggctattgcc tgctatgtgg gctaggtcta gaacctttat tcaagccctc
    12181 agtaaagggc tttgataaaa attcttagtg aatgtaggct tgccaaagtt gttgagcttg
    12241 ttctgcgttc attttgtcgc tttggttcca gtcgattaac ttgccatttc tgaacattgc
    12301 tctttcaatc acaaactctt gcgtggtttc attttcaaag acctcaaaca cattgatgaa
    12361 atcactagtg cgtttttctt tacgtccgca taaaatgtag tctttgtggt tatttagcgt
    12421 tgcttgtgcg ttcattttgg tttcctcttt gtctgtgacg ttgtttgttt tgatgtgctt
    12481 atattatctt aaagataaaa agacaacaat aacaatttaa ctaaaagata ataaatttat
    12541 tatcgtttat tgttatctat ttgaatttaa aagaaaataa aattttggag ggcggtttaa
    12601 ctgcttaata aataaacagg taagaagtgc aaatggtcat tttgaattgg gattttgcag
    12661 attttaggca aaagaaaacc gccacgaggg cggtttgtct ataagatatt tattgaggtt
    12721 aatttttgta gccgaccttt tttcttattg atatataggt tttctccttt acatcgaatt
    12781 tgctgttcgg ttttgtgtgc ttcagctgcc aatttgtact gctcaggagg aaggtcaacc
    12841 ctaatgtcaa ccgttttatc ttctatttta caaggtacct gaatataacc tccatcagct
    12901 aaattgctgg agtgtaaccc tacaactttg ccaatgattt catagtgtgg gagggtatat
    12961 tctccttggt aatacctaga tgcaacctga attactttaa tttctttttg agaaaattta
    13021 atattaaatg tttcagaagg cattgattca tcactaattt cacccacttg gagtttaatt
    13081 tcgatttttc tttgttggtc tgaaccactt aatccaataa tagcttcaca aagattatga
    13141 cttactcctt caggtatcaa ttcagcaaaa atagtcggat tgtgatcata atgagtaatt
    13201 ttttctttca gcttgttcag gctgttaacc aaattatgcg atacactccg agaaaatgaa
    13261 attgcctgaa taatttcatt ctgttcctta atttcaatat tctcaacagg ataagataaa
    13321 ttgacaatat agcttccaat ttgagtttgc cctaaacgaa cttgagacat aaactctgct
    13381 acatctttgc cacctgagtt atgtccaaaa gctgcctttt tctttttagc tgaaagtgcc
    13441 aaggcattaa ttaaatgttt ggttttttca aataatttta caccttcgtt tagcggaatt
    13501 gtcccatctt taacgctttc gccaatcact ctaacagata gcttgtctgt atattgattt
    13561 gaaatattaa gctttaacgt ttctacgttt ttttcttcaa ttttggcgag cttttcaagt
    13621 gctttctgca acacttcctc tctatcttca gcaattggct ttggtaatgt aacctctaaa
    13681 attcgatgtc caagatcttt ctgccaaata accgcatact ctaattcaaa cgcaatttgc
    13741 cagcttttgg cagttaaata gcgagcaaac tgttcgagaa acagtaacgt gtccgtttta
    13801 ttgtttttca taaagtttct cctactctag cgtattcaat cattttaatg agtacatcag
    13861 tggtaaatcg ttgattttct ggaaatgtga gggtaacact acttctattt gttgttgccg
    13921 gaaagccttt taatgatacc caataacaat gtctttttaa agtcataaat tttttcttat
    13981 gtgagagcca ttgagtcgtt tttttaggca agtcacatac aattaagtag cgagggttcg
    14041 cacaattttt ccttaaatca tcatagtttt tctttttgag tttatagctt accagaccat
    14101 ttttaatatg aagatctcct tctgatttaa gttgtagctt tatttccgga tcacttcttt
    14161 tcccttcttc agtcggaaat tctgcagaaa ttgcaagatc aacactatga ttgtctacta
    14221 ctggtaccgc atgattaaag cctgcattag cagtaatagc taacacataa gcaatattaa
    14281 attgttccat ttgttgtgta ggtgaaagca tatttctatc caataaaatt caactgttgg
    14341 ctttggtgaa cttttactct agcatggata aatagctgat cttgattttc ttcagtgata
    14401 ctccactttt catagagttt gttatctgaa atcactaata tttgatcgcc tgtattttgt
    14461 aatcttttta catacaaatg tcctttgtat gtaaatacat aaacaccatc gccggtaaac
    14521 tcatttacgc taatatcaac aaaaagcata tctcccgagg aaaatgtcgg gtacatagaa
    14581 tcaccactta aattgataat tctgatgtat cgaggtgcca tattccgaaa gagggaataa
    14641 aattgctcag gcacataacg catttgattt actacttcaa ctaattcact gcttgagccg
    14701 aagcctgcac tagcactgac atctaataca tcaattatga taaagtcatt taaatcttgc
    14761 tcctgcaatt tttgttcttc attgcctatc cttgaattga taaggtttga ttgctctgaa
    14821 tgtatttgat ctaaccagcc tctaggttta ttcatcccat cttctaattt ggcggcaatc
    14881 ttgtcaccaa tgccttttgg cttaccgttc tgaatagcat ttttattttt gatttgtagt
    14941 agatagctta ctgcgatacc tgttcgatta gctaaatcag atgtgctttt agcctcatct
    15001 atcaagcgta ataaattatc gtatctaatt tcttttaggg gtctcatatc ccacctccat
    15061 actatttgct ttattttatt atcatttcga taacatttaa atatgatcta ttttgttgat
    15121 tttgatttat ctttaagata atattcactt atcttttagg taaggattat gaaatgcaat
    15181 tacaagaata catagaaaaa tctaagtggg gggaaatctc tcgattagct aaagccatcg
    15241 atgtagcaat tccaatagtt tcattttggg taaacggcaa acgccaagta ccggcaaagc
    15301 gttgcccgga aattgaaaaa tttacagaag ggaaagtaac ttgtgaagag ctacgccctg
    15361 atgttgattg ggcagtttta cgaaattcag gcaaataaaa aaccaccgct ggaacggtgg
    15421 ctaattacaa cctaaggagg tttattttga aatcccaatc attattaccg ataaccgcac
    15481 aaaatgcaag cggtgcggaa gtcaaaatca gcagtattga aattgcagag ttatgcgaaa
    15541 aacaacataa gaacgttatt gtagatattc gcaagatgtt agctgagctg aaattgaact
    15601 cggctgattt ttcagcccag tatcaaacca aagacggcag aatgcaaccc tgctactttc
    15661 ttccaaaacg agaaacaatg attttagttt ccggctatcg cattgatctg agagccaaaa
    15721 tcattgaccg cttagatgag ttagaaaagc aacatcagcc ctctattccg aaaaattacc
    15781 ccgaggctct gcgaatggca gcggagttgg cggaacaaaa ccaagtttta ttgttggaaa
    15841 aacagcagac taccgcagaa aaccacgcct tgaaatccta ctttgaaccg ggtttgaccc
    15901 ctgctcagtt tgtaaaaggg ctgaatggcg taaatagtaa caagataaat gattatttac
    15961 gtagtcgagg ctggttatac aaagacaagc attgctggcg ggtgtttagc cacgttcggg
    16021 ataaatatct gacggagtca tttaagagaa ttgaagttga tcctgttgaa cgtattgaga
    16081 tggccaccta caagccaatt ttgcttgaga aaggtgctgt taagattttt gaggcttatt
    16141 tacaaggtaa gttaccaatg aaagccgatt ggaacggcaa gtattatcac agtaaggtgg
    16201 cggtatgagt atgttattaa tggttaaggc gatgaattgt acggtgggaa attctgcccg
    16261 taaattagtg ctgttaaaac tcgctgataa cgcaaatgat gatggtgttt gctttcctag
    16321 ttatcaattt attgcagata agtgtgaaat gtctaaacgc agtgctatta gccatattga
    16381 tgaattaatc aaaatgggat atgtgagcaa aaaatcacgc aaaaacaaag atgggtctag
    16441 ttcaaattta tatcaattac accttgatgc ccctagtgaa aaatctgcac tagggggtga
    16501 aaattttgca ccagggggta gtgaaaattc tgcacccata accagtcact ctattaacca
    16561 gtcaattaac cataatacgt ccgaacaaaa ttcggacggg gtggataaaa aatcaaaata
    16621 tcgtttttct gataacgata tggcagtggc aaagtggatt tttaaacgag tgaaacaact
    16681 agctcctcag accaaggagt cttacttgcc gaattgggcc aatgaagtcc gcttgatggt
    16741 agaacgtgat aaacatactc accaagaaat ttgctcgttg tttaaatttg cgaccgaaca
    16801 ccatttttgg ggcaggaata tcctaagtgt tgtatctctt cgagctaagt gggatcggct
    16861 aaatctagaa aggcaatcat cattacgacc aaacaatatt cactcagcaa caggcaatgg
    16921 tgatattcaa gacacaacgg ggttttcaaa aggtcttgtt gttgatgtag gaggagggac
    16981 aaaatgggaa ttttagctac aacgactcaa aatcaagtat tacctgttga gattgtggaa
    17041 caagcagagg tggaaacaac caagattttc aaccgcttga aagcaactca cttaggctgg
    17101 cgagccaata tcaagagtca agccgaatat gataatgctc gccgtgaatg ggttcgtttg
    17161 ttgattgaaa atcgcttaac gccaaaagaa gttgaacgag gtttgaaaat tgcggatacc
    17221 gataaaaatc cctatttacc gagctttgga caattcctcg aatggtgtaa atccattgac
    17281 tacgcagaat taggtttgcc tgatatggat caattcctca agcgtttaaa tcatttttcc
    17341 gcttttgggt ttactgaaat cgataatttt aagtttcgtt caaacgctga atattggctc
    17401 ttaactgacc tttatgaacg aaatcgaaaa catagttgga aagatgaaac attacgtaac
    17461 caagctgaaa aagcgttagt agagatggca aaacggatta tgagcggtga acaaattcca
    17521 cctcctaagc cagtaatcga agagaaaaag aaagtgccaa tagatccacg cattcagcga
    17581 attttggacg agaagaaaca agcaggagca atgcaatgac agattttgat aaagacactt
    17641 accaaacacc taattatgtg cgtaattggc taaatcatcg ctatgcgtgg tttcacattg
    17701 acggttgttc taacggcaaa aacgcattgt atagccactg gattggcaaa gcggcagagg
    17761 gcttagacga agacacacta agtggtcaga ttgccgagga tttcttggca gagaacttgc
    17821 tcgatgtgat cttggaatgt gtggcagatt ggggcgaatt actgcgtatt ttcgtgaatc
    17881 cgccatacag caatccactg ccgtttgtac aacgggcggc agagctgaaa aaagccggcc
    17941 atattgtggt aatgctttta ccggcagata aatctacccg ttggtatcag gttatccaag
    18001 aaaacgctag tgaggtgatc gacattatcg gcggacgtat taatttcatc aatccgctca
    18061 cagacgagga agtaaaaggc aacagcaaag gctcgatggt ggcggtgttc gatccgtttg
    18121 tggagggaat agttacccgt caaatgccgt tggataagat taaggagctg ggcggctatg
    18181 aaaaataacg aaggctggga cggtttagat aaggcgtatc attgccttag ccgcaacaaa
    18241 aagaaatggg ggcaataatg gcggaaggtt tgctacttac cccttacttt caaaccgaag
    18301 tgggtattgt gttttacaaa gtgcctaaag atgtttctct tgctgctttc ggtgagcgga
    18361 ctttgttgca acctgcaccg accgatttag caacggttaa atcaggcaag gttgcaaatt
    18421 tttcggcaaa ttcgaccgct tgtaaagagt tggcagagtt tgctaaatcg gcaaaagttc
    18481 gctcaacgct aaatcagcgt gacaaataca gtaatgattt gccttatacc cggtttgtaa
    18541 agtcaattca gacgtgccaa tgccgagatg gtaaatactg ccaccacgaa aaagtattcg
    18601 tggagaatga aaaaggtgcg gtacagcttt gttggtatca cgacaaaatg cgaatggacg
    18661 gtgaaatccc gaatgaaaaa ttagaagcac tagcggatga aaactgggaa aaatttatcg
    18721 cccaacaaat ccgcttaacc ttacgcaaaa cgcaatcttc tgccattgaa tttgcggact
    18781 tagtgttgtt tgcgagtatc aaaggtttgc ttgatgaatt agacagcaac gcattacagc
    18841 agtttctcgg ctatccacca ctgaataata gcggtgtgag caaagaaagt aatatcggat
    18901 ttgatgatgt gccgaatgct cgagccaacc tcaaaaagtg ggctgaaacg ttaaaactga
    18961 aagtcgagcc ggagccgttg gcggcattta tggcaaaacc gaaattacag cggttcgagt
    19021 ggcggaagtg gttgcagttt gtaaaagcac agccttgtat gtgttgcgga caacaagcag
    19081 acgacccaca tcatattatc ggctatggcg gagcgatggg gagcaaacag cacgatttat
    19141 tcactctgcc cctatgccgt attcatcacg atgaattgca tcgcaatgtg ggtaaatttg
    19201 agcaagatta cggctcgcaa ttagagttgt tgattaagtt tttagaccga gcgataggtt
    19261 tgggggcgtt agaaattgat ggttgaattg gtgctgccct atccgccaag tgtaaacgac
    19321 tattggcggt gggtaagcaa aacaagacga gtggtgtgta aacgaggcaa agactatcaa
    19381 tgggcaacat ttctcgcagc acagaataaa cctaaatttg gcggacaggt tgaaattaag
    19441 tgcgatgttt acttccctga taaccgagat cgggatttgg ataacttagg caaatgtatt
    19501 ttagattcgt tggtatatag caaagtgatt gttgatgact cccggcacta tgtcaaaaag
    19561 ctgacatttg aggacaaggg caatcaaaaa ggcggtgcgg taattgtaag gattaaggag
    19621 agactagatg ttaattgata ttaaaggtat tttacggttt tggggctatt ccgccaacgg
    19681 cagacttggt acggaatttc cctgtgtggc ggcagggatg aaacctgctg tatcggcaag
    19741 caaccaccgc atattacgtt taactgacga atccattttt gaaattgacc gctgtatcaa
    19801 gcaacttaaa gagcaagagc ctcagcaata tgaggtgctg attggtcggt atgcagcaag
    19861 ggtatctgat acacaaatcg aaaaagtatt aggtatcagt cactccacct ttaaacgaga
    19921 attggcacag gcggaaatgt atgtgctggg tgtggtagtt gggttaaaat tggcgttggt
    19981 ggtttaaata atgtgatctg tatcacaaca ttaattcaat aaatgagata aagtatagac
    20041 tctttttacc tatggagatt ttaccaatga aaaagttagt tttagttaca gcattaagtt
    20101 tagttttatc tgcttgcggt agtggtggag gtggtggctc atcagcatca aatcctaata
    20161 aggaagctac tccacagtcc ccatctaaaa gtgaaactaa gtcagatact tcatctcaaa
    20221 atcaagtaaa aggtgcttta tctaaagttt cggcagattt acaagagcaa gtaaaagcac
    20281 ttaagcaaat taatgttgat ggtagaatca ttgagttagc ccaagagcct atcggtttta
    20341 tagaaaaaga tttagataat ggcaaaaaag gaaaagccta taacttagct tattctagta
    20401 ttggttatgt gttacctaaa gatgtaaaaa cggatgaata tggacgagta attgatgagc
    20461 gagcttctgc taatgatgtc ggtatatttg gactagcaac caaattccaa gatttaccaa
    20521 aatccggaac tgcacactac tctggcgtat catttggtgc aaacagtgaa ggtaaattaa
    20581 cacttactgc tgattttggt gacaagaaag taaatggctc aattactgaa agaaagctat
    20641 tatctaataa ccaagcatta tcttctatta acttattatc tgcccctatc agtcaaacca
    20701 agtttgctgg tgaagaaata cattttgccg gcattgctca agccaacgta gaaggtaaca
    20761 ttgttcaagc tccttatggc ggtaaattta tggggccaaa agcggaagaa gttgttggtt
    20821 tcgttgccga tgatcataat gacccatatg aagtatttgc tggtcaaaaa taatttttaa
    20881 tgtatgattg acaaggtcgc cctaaaagta taggatttat gcaatccttg cgattagtgc
    20941 aagtgcatta cgcaatacta tttttatagc cctgattggt tcagccagtc ggggcttttt
    21001 tgttgccccg aaaaagtggg gtggagtatg aatacaatgc ctgaaaagaa ccctgatata
    21061 tatacgcagg cttggaatta ttttgcaatg tttgtcagca atcatagcag ttttatttgt
    21121 gctgttatca ttgctttttt tacgtctatt accaagtcat ttttatacgg caaaaccgac
    21181 acaccaaagc gggtctttgc agaagcgatt ctgtgtgcgg tgattgccgg ttcgttgcgt
    21241 ccgattttaa tctattttaa tgctgatgtt tccttaatta ccccgattgg tgccggtatc
    21301 ggactactag ggacaagtgc tattcgtcaa atgattttga aattcctcaa taagaaagca
    21361 ggagttgatg ataatgttaa ttagcgaaag aaaatttaaa caagtattcc ccagtgcgat
    21421 tgacggaatt tatgccgaaa ttgccaaaca cattgaaaaa gccggttgca agacgaaaga
    21481 gcagcaagca atgtttttgg ctcaatgtgg cgtagagtgt gctggttata aaacctttga
    21541 agagaatttg aattattccg ctacggcatt attagccaca tttccgaaat attttaccca
    21601 acacaatgtt gtgctttatg cccgagataa gcgtgcgatt gctaatcggg tgtatgcaaa
    21661 tcgaatgggt aacggcaatg aacaaagtgg cgatggttgg aaatatcgtg ggcgtgggct
    21721 gatccagatt actggtaaag cgaattatat tgagtttgcg aagtgggagg ggttgccaag
    21781 cttggtgacc agtcctgacc aaatcacaga taaccttgct cttacggtgc aggtggcggt
    21841 atggtattgg caaagtcgca aattagcaag ttacggtagt gacattctaa aagtaaccaa
    21901 gctgattaac ggcggcactc acgggctatc acaacgcacg aactattatc aacgattaat
    21961 ggtggcataa atgagtaaat atatttatct cgtagccacc attttgattt tgggcttgtg
    22021 tggttggatt tggcagcagt ccaagcagat taatacctta agagccgaaa accaaacgca
    22081 agcccaaacc attgagcagc agcaaaaagc caatcaacgg cttgctgata agctcgaaca
    22141 agagcgacaa gcggtcgaaa aaatccgaaa aagtgcaaat gaaatgcgaa acaaagtgga
    22201 gattgttcaa aatgagatta agtcaatcct tgcccaagac agttgtgcta aagctgattt
    22261 gcctaatggc gttgctgata gcattaagcg gttgcacagg cagaacaatc acaagcactg
    22321 aatatttgta tccgccggcg gcttaccttg tgccgtgcga gcggactgaa tttagcggca
    22381 atacatacgg cgatacggtt gagtatctga taaaagtgat gggagagcgt gatttgtgtg
    22441 ctaaccaaat cgaccgtatc agagaatggc aagcacaaac caaacaaggt tttaaatagc
    22501 ttggcggatt aagccgctat gacatatggg agcgtaacag ctcccttttt tattgtaccg
    22561 cattacttag ttatgctttt ggttatatca agaccataac taagcaatgt gttctattaa
    22621 cataaggatt atttatgatt gtgaaattga aattaggtgc ggtagttgtg ctatcacaag
    22681 ttaaacaagc caccatcgca tacgctggat cagaggcata ccaaacagct attgagcaag
    22741 ccaagaaagg tttacttgat gaagacaaag gtaaaccatt tgaaactgtt cttcacttcc
    22801 ctgctgtgta tgccgatgaa gatggacaag aagaaatttg ccctgaacag attgcaacta
    22861 cagtacgttc agataatgta agtggtgagc ctgttgcagt ggtattaatc ccagatgata
    22921 acgtagttgg cgagttacag tctattttca tttataagac agattatgca gaaattttta
    22981 ctgacaatgg tgtgaaatta agtgcagtaa gaacaagtcc agctcctcgt taattttgta
    23041 aaaggtactc ccgaggggat acccctttcc acggggttgc ggcagcgtgg ttttcggcaa
    23101 ttttttgagt ttctaggcat catcatcttc ctatgatgtt gctgtttttt aggcggtttt
    23161 gatttttagg atttgagcaa atggacaact tatttgatct aaaacttaac atcaatcaga
    23221 tcgccgaact cacaggattg caccgccaga cggtatctca gcgagtcgct gggttaaatc
    23281 cagcactcgg tagtaatagc aaattaaaac tctatgctct gcgtgattta atcctcaccg
    23341 ggttggcgga aaagatgtcg gcagatgtcg atagcctatc acctgctgat cgtcgtgcgt
    23401 ggttccagtc ggaaaacgaa agactaaaat ttgaaaaaga aattggcgag cttatcccag
    23461 caagcgaagt ggctcttgaa atgtcagctt tagcaaaaac ggtagtacaa gccttagaaa
    23521 ccttgcctga tattttagag cgagactgcg gattgcagcc taaagatttg atacgagtgc
    23581 agcaagtaac tgacgatgta cgagaccaaa tggcattaca tatccaagaa gttaccactg
    23641 acacggagaa tgaataatgt ttgctagtgc taaagaaatt cgacgtgata tagcaaatgc
    23701 cataaaagca cctcggcgaa tgagagtgtc agaagcagta gcggaatata tgcgtgtacc
    23761 acttggcgga ggcaactcgg tcaaatggga taagcacacc gccgcctata tgttagaacc
    23821 gatggactgc ctcaatagcc gagaatacga tgcggtgatt tttgtcggcc cggcacgaac
    23881 gggtaaaacc atcggcttga ttgacggctg gataacctac tcaattatct gcgatccgtc
    23941 tgatttcctg ttggtgcaac ttacccaaga gaaagctagc gaacatagcc gaaaacggct
    24001 tgaccgcaca ttccgctgtt cgcccgaaat tgccaagcgg ctaagcccac gcaaaaacga
    24061 taacaatgtc cacgacaagt atttcagagc gggcaacttg ctcaaaatcg gctggccgtc
    24121 tatcaatgtg ctttcttcat cggactacaa atatgttgct ctgactgact acgaccgctg
    24181 gccggaagat gtggacggag agggcgacgg tttctcgctt gcctcaaagc ggacgaccac
    24241 ctttatgtca gcaggaatga ctttggtgga gagttcgccc ggtaaagata ttgttgatct
    24301 caaacatatc ccgaaaagca cccacgaggc tccaccgact accggtattt taagcctcta
    24361 taatcgaggt gatcgccgtc ggttttactg gcaatgcccc gactgctccg aatacttcga
    24421 gccgtcaatg gcaaatatgg tcggctaccg tgaagacagt gattttgtca aagccagcga
    24481 aaacgcacgg ttacaatgcc ctcactgcca aaccctgatt gcccccgaac tcaaacgaga
    24541 gctaaatatc aagggcgtat ggctcaaaga ggggcaaaaa attgatgcaa gcggtcaaat
    24601 tagtggcgaa agtcgcaaat cccgtattgc ctccttttgg cttgaagggc cagcggcagc
    24661 ctaccaaacg tgggcgcagc tcacctacaa actgctcaat gccgaacacg aatatgaaat
    24721 gactggcagt gaggaaaccc tcaaagcggt aacaaatacc gactgggggt taccttactt
    24781 accacgatct gcattagaac aacgccgttc tgatgagttg atggaacgcc gagaagaagt
    24841 agaagagaaa actgtaccag ctcaatgtcg ctttattgtg gcggcggtgg acgtacaggg
    24901 cggtaaaaac cgccgatttg tggtgcaaat ggtcggttac ggtgaaaatg gcgaacgctg
    24961 gttgattgac cgctataaca tctcacatac tttgcccgac agtgatggcg tgattgaaaa
    25021 aattgaccct cgtattcccg atgattggta catactgatt tcggacgtac tagaaaaacg
    25081 ctacccactt gcccacaatc caaaccactt tatgccgatt ttggcgatgg cggtggacag
    25141 tggcggtgaa gatggggtaa ccgataacgc ctaccaattt tggcgcaaat gccgccgaga
    25201 tggctatgcg aaacgagtct atttagtcaa aggcgacagc accaaacggc aaaagctgat
    25261 taccaaaact taccccgaca ataccgcacg aagtgaccgc cactcctccg cacggggcga
    25321 tgtgccgttg tacttgctcc aaaccgacta cctcaaagat cggattaaca acgccctgtt
    25381 ccgtgatacg gtgggggcga actacatcca cttccccgac tggctaggtg aatggttttt
    25441 taacgaattg acctacgaag aacgaggagc ggacggcaaa tggcggaaac cgggcaaagg
    25501 caataacgaa gccttcgacc tgttctgcta tgcccacgcc attgcaattt tacgaggcta
    25561 cgaacgaatc aaatggggcg atgaaaacga tgtgccaagc tgggcaaaac tgcccgacat
    25621 caaccctaat atcattcggg aaacgccaag aacggctgaa caagcggtcg aaattgaaga
    25681 aaaatccgaa aaaccacaac ctaaacccac caaagcaaaa agcagttggt taagtggtgg
    25741 cggtagaaaa acaggaggct ggctatgagc ctttacacca tagacgagct taaacaaaaa
    25801 atccgcacgc ttgatgaaaa aatcgaaacc gcccaaagcc aagtgagctt taatggtcgg
    25861 tcggtttcat atcaagtggc ggaactaacc aaacagcgtg atcgctatca aacaatgctg
    25921 gatgaacaac ttgcccaaag cgggcaacgc accaaacagc atcgaattaa atatgcgagg
    25981 tttatttgat gaacttcctc gaaaaaacca ttgccaccct ttccccgaaa tgggcggcaa
    26041 atcgctctcg aaatcgctat gtgctaaatg cctatgaggc ggcacagcct agccgaaccc
    26101 ataaggcaag ccgagagagc aaaggggcaa actctactgt tcgccaaagt gcggtcagcc
    26161 tacgggaaca agcccgagcc ttagaccaaa atcacgatat tgtgatcggc attctcgaca
    26221 aaatggaaga gcgggtgatt ggctcaaaag gcattcatat tgaaccgcag ccgctgacgt
    26281 tggcaggtga agtccacgaa gaattagctg ggcaaatccg aaagctgtgg gcggaatggt
    26341 cggtgaaacc tgatgtgacg ggattataca ctcgcccatt gctagaacga atgctacttc
    26401 ggacttggct acgagacggc gaagtctttg ttcagttggt gaaaggcaag gtggcagggt
    26461 tagaacacgg ctcacaggtt gctttttccc ttgaagcctt agagccggat tttgtgccaa
    26521 tgcaatccga tgaggcaaaa aacggcttgg tgcaaggcgt gtttctcaat gcgtggcgga
    26581 agccgactgc ttaccaagtc tatttagaca atccgcaaga aagcaacgga atgtacggca
    26641 aagtgaaaac cgtgccggca gacaatatgt tgcacctcgc ctttcgcaag cggttacatc
    26701 aaattcgtgg tgtaagtatg ttgcacggtg tgattgtgcg attggcggat ctgaaagaat
    26761 acgaagagag cgaacgagtt gccgctcgca ttgccgccgc aatgacgatg tacattaaaa
    26821 aaggcgatgc ggcactgtat gatgacgaca gtaacagcga tggcgaacgc ctgtttgata
    26881 ttgcccccgg tgcggtgatt gatgatttaa aaccgggtga agacatcggc ttaatcaatt
    26941 ccaaccgccc gaatgtgaat ttggaaactt tccgcaatgg acaactgcga gccactgccg
    27001 ccggtactcg ttcgagctat tccagcatcg cccgagacta caacggcact tactctgcac
    27061 agcgacaaga gctggttgaa agttttgaag gttatgcggt gctacaagat gcgtttgtgg
    27121 cggcaatcag ccgcccgatt tatcgggaat ggctcaaaat ggcaatcgcc tcacaagcga
    27181 tcaaactgcc gcctgatatt gaccaaaact ctctctttaa tgcggtttat tcaggtcctg
    27241 taatgccgtg gattgaccca atcaaagagg cgaatgcgtg gaaagaacga attaaaggcg
    27301 gtttagccac cgaagggcaa gcaatccgag ccagtggcaa taacccagcc gaagtcaaac
    27361 ggcaacgaat tgtcgagatc aaagaaaatc aagccgaagg gctaaaattt gataccgatc
    27421 tcaccaatta cggtgggcag gataaatctt tctccaatca aaaagatgaa attaacgaag
    27481 atgaataaca ggagggtgcg tgaaaacgtg gttcaacatt caagccaaag cgaatgacac
    27541 cgccgaaatc tcaatttttg acgaaatcgg cttttggggt gtcaccgccc aacaatttgc
    27601 taaagactta aaagcccttg gcaacaattt aaaacaaatc aatctgcata tccactcgcc
    27661 cggtggtgat gtgtttgacg gcattgccat ttacaacctg ctaaaaaatc accctgctaa
    27721 caagaccgtc tatattgacg gtcttgccgc atcaatggct agcgtaattg caatggcagg
    27781 tgatgaaatc attatgcctg aaaacgctat gatgatgatc cacaaaccgt ggggcattca
    27841 aggcggtgat gcggatgata tgcgtaaata tgcggattta ctggataagg ttgaaagtac
    27901 actgattatg gcgtatgtcg ccaaaacagg taaatacgaa accgatttgg cagaaatgct
    27961 gaaagaagaa acttggctca caggcaaaga gtgcgtggag caaggtttcg ccgataagtt
    28021 agccgaaccc cttgtggcga tggcttgtat ccaatccaaa aaattagagg actacacaaa
    28081 aatgcctgac aaaatcaaaa atatgctatt cgcaccacaa ggcaacgcag gtgcaaatcc
    28141 aaaacatgaa caacctcaaa caccaccaca agcgggtgaa aatccgcaaa atgtggcaaa
    28201 acctgatgca atggtggcat tagcccaacg caatgcaacg attaaagcga cctttgccgc
    28261 tttcggcaca caatttgacg gcttgctggc agaatgttta gctgatgtgt caatgaccgc
    28321 tgagcaagcc aaagacaagc tccttgccaa actgggcgaa aacaccaccc caagcgtacc
    28381 gcaaaaccac attcacgcag gtaacggtaa catcgttggc gacagcgtga agcagtcgtt
    28441 aatggctcgt gctggtcaag ataccgacaa aaccaacgca agagataatg cctacaatgc
    28501 aatgaccttg cgtgagttgg ctcgtgcctc attggttgat cgtggcgtgg gtattgcggg
    28561 ctacacccca atgcagatgg tcggtcttgc ctttactcat tcgagctccg acttcggtca
    28621 aatcttgatt gatgtggctc ataaatccct actcaaaggc tgggaaaccg ctaccgaaaa
    28681 ctacgagcag tttaccaccc gtggcactct tactgacttc cgaccggcaa aacgagtcgg
    28741 tttaggtgag tttggctacc tgccggaagt gggcgaaggt gaagaataca cctacggcac
    28801 aatcggtgat gaaggtgcat ctgttgcatt ggcgacttac ggacaactgt ttagcattac
    28861 ccgtcaggcg attatcaatg acgatatgca tcttttaact aaaatccctg agaaaatggg
    28921 tgcagcagcc aaagcgacta ttaccaaact ggtgtttgcc ttgattaccg gcaatgcgac
    28981 agcccaagac ggtaaaaagc tgtttgatgc tacacataaa aacagcttaa cgggtgcggc
    29041 attgaatgtg gaaaacattg acaaggcaat ccagttaatg aatggctttg taaacagccg
    29101 tggtgaaccg ctctctattg agccagaatt tatgctgtta ccaacctcat tgcataccaa
    29161 agcaaaacag attcttggtt cgtcaagcgt ggaaggtgca gacatcaaca gcggtatcat
    29221 taacccgatc cgtgatattg tcagcccgat taaatcgcct cgcttacaaa ttgcagatcc
    29281 gaaatcatgg tacttgctca ataaagaggc gattgaagtc tcttatctgg acggggtgga
    29341 tagcccttac atcgagcaac agcacggctt tacggtggac ggtgtttcga ccaaagtccg
    29401 tatcgatgct ggtgtgaatg tgattgacta ccgtggtgtg gtgaaagtga ccaacgctta
    29461 atttaaacaa tttaaaacct gaccgcactt ttaacagtgc ggttttttat tatccgaaaa
    29521 aaggaaaaag agatatggct aaaaactata ttcaagacgg caataccgtg cgtttaactg
    29581 caaccaaagc gattacttcc ggcgatgtca ttgtggcgga ggatttaatt gcgattgcgg
    29641 tttctgatgc ggcaaaaaat gatgcagtag ttggcttaac taccggtgtt tttagcgtaa
    29701 aagctaaaca agcagatgac atcaaacaag gtgcagtgtt gtactggtct gaaacagagg
    29761 gcgcaactct caccgcaggc tcaaataaac gacttggcat tgcgtggaaa gactctggca
    29821 catcatctaa tcaagttgat gtgaaaatca atgtctagcc cgtttgagca ggcaatagct
    29881 gccgccgatc aaactattca gcaaactatg atgagtgagt ggttgattgg cggcaagcct
    29941 taccctgcaa cttttgatga agcccccgct atttttaacg gtttacactc aaccgatgac
    30001 agagctattc acggcacgga acgcacactg accctatttc gggcgagtgg ctacaaaccg
    30061 agattggacg accgagtgag cggaaatggc aagaaatacc ttgttaaatc ctatcacttt
    30121 gtcgatcagt taatcgtatt gcaattggag taaacaatgg gttctcaagt gaccggttta
    30181 aaagaactgc aagcctccct gaaaaaaata gctaggcaaa ccgtacctaa agcagccgct
    30241 caagcaatcc gtactgttgg gcggcaagca atgaataagg cggttaaatc ggtggcggca
    30301 gagattggcg taaatcaaaa gacaatcaaa ggtagagcaa aaatgacggc aaagcccacg
    30361 ccgtcaagat tgcaagccac gattaaggtt aatcgatcac atatgccgat gattcgggta
    30421 ctagagcgca agtccaaccg cctgtcaccc accaaaggca gtattagagt tgggaaacac
    30481 actgtacaac gtggttttcg ccaacgactc gccaatgggc gaacgcacat tatgtaccgg
    30541 caaggtcgta agcgttacgg cattgatgta gcaaaagtgc cgttatccca accacttaca
    30601 caagcatttg atcgagaatt gaaaaactat cccgaacaag tgcaagcgga attagctaaa
    30661 caaattgcgg ggaaattatg aaaatccaca caaaaatccg aaaagaagtc cttgaattat
    30721 tacagactaa attgccggaa attgataatt tttataacgg gctgccaact tttattgata
    30781 ttgaggagga acaacttgca gtatcggttt atctcgatga tatcagtctg caagaaataa
    30841 ctgtttgtaa taatcaatgg gacgccaagc tcaatattac aatccatctg aaatctaccg
    30901 agagtgcaga agatgaatta gacgaatggg cggaaaaaat tcgtgaaatt atcgatgatt
    30961 atcccgaatt tgagcattta gagtcagtcg cgctctctca gtatcaatat gagcaagacc
    31021 agaatcagcg tacgtggcac atggcgacat taatctttga tgttgagtat taaacaaata
    31081 atctctatag gagacttaaa atggcaaaaa caacaaaagt ccaaggcacg aaatttagaa
    31141 ttagcgttgg acgtgaggct caaaaagcaa ttaccgcaat taacttaaat actgctactc
    31201 taacgattgc atcctcaggc tataaaaaag gtgatgcaat cgagcttaca ggttgtggtc
    31261 aattagatgg tatctacccg gtgttatcag taactaccga tcaggtaaaa ttatgcgaag
    31321 aagtgaactg gacaggtaaa gatttaccag ctaattacac caaagccaag gcggcactag
    31381 tgcaatactc ggagcaattc tgcgcggtaa aaaacattga aaaatctgat gatactttga
    31441 gtaccgaaga tgtaacaacg gtttgttcag agggcacaga aaccgagccg ggtgaaattg
    31501 aatttggttc gatcaaactc agtttcttcc acaagcctac taccgaaatg caaacccgat
    31561 tgcgcaaact cttttacgac aaatccacct ttgcctacaa actggaacta ccggataacc
    31621 atggcacgac ctatggcgaa ggctttattg aggccggcaa cggtttctcg ggcgaagtta
    31681 agggtaagta tgaaggctct gtatctatta agccaagcaa acgcgactac ttattagttt
    31741 aattgcaaaa aaaccataaa attcgaccgt ttgtagaaat aacaagcggt ctttttatat
    31801 cagaatttta caaaaggaac gaacaatgac actgcgtgag aaactccttg ctaataaacc
    31861 aaaattgcaa cctatcgaaa tcaacggcga gacctactac ctgcgtgaag ctactgttgg
    31921 tgatatgaac aagcagattt ttgaaacccg aagctggctc attcaacaag ctgaacaaga
    31981 aaatgttgaa ttaccggcag aagatgatga aacctttgat gaggctctca accgttttgg
    32041 cgaaaaatac cgccttgctc aatcggttgc ctaccgctta tgtgatgaaa acggtgtatt
    32101 actgtttaat cctctcgaca ttaacgatct gaatgccatt gccgaattag acagtaaagt
    32161 gattatcgac tttaaccaag ccgtgtccgc cccaaaagac tcagcgagcg aagaaagttc
    32221 caaataaccc tttcgctcgc actgggtaaa acacttgaag aaatcgaaca aatgcccgaa
    32281 cgccactttg ccgaatatcg gcttttctac caagaacagc ctttcggctt atggcgagac
    32341 gattaccgca ccgcccaact tgcccactta accgcaatgt tcaaccgtga tccgaaaggc
    32401 aaagctccaa aattagcgga gtttatgccg ttttttaatc ggacagatga ggtggaggaa
    32461 atagaagatg atggtgtggc agattatttg gcgaaaaggt aaagaaaaca gcttgaaatt
    32521 ccttgctctt ggatatatat ttcctcaaag agaaggaggg aagtatgttt gaagcactag
    32581 accgttttat gattaatacg attaaaattg caattattgt atttttggtc gcttgcatct
    32641 ttattagtat gccgaactgg tggatagctt ctatcttagt acttttcccg actgcctatt
    32701 tgcttgataa atactggtgg cgaaataccg aaatgtatcg ccgcaaaatg gataaattag
    32761 ttgaagagat gaaaaataat cgtcaaatct aaattaacat caattctagc ccgctttatg
    32821 cgggcttttt atttggggtg aaaaagtgag tagctcaaac agattaacta ttaccttaga
    32881 tgtagaaaat tctaagttac tagctggatt cgcacaatct gatacagtag caaataagtt
    32941 tgctcgcagc ttcattgtga atatggatca ggctcagcaa aaagcacgtc aatttgctga
    33001 tagatcgaca aaatatctaa aaaatattga acaagcagca aataatctta atagctctgt
    33061 atcaaaagaa cgtttttggc aaattgcaaa tcggttgcaa ttcccgacaa gtaaagtgat
    33121 tagttatgcc aatagctaca ccgaactcgg taataaactc aaattagtca ccgaaagtga
    33181 atcccaacac gcccgagcaa tggcggcggt gtatgatatt tcgctcaaaa ccgcccaatc
    33241 tacacaggca acctcttcgg tttatcagac ctttgctcaa aatgcaaaac agctcggtat
    33301 ttctcaaaac gatgtggcaa aactaacgga aacggtagcc aaatcggttg ctatttccgg
    33361 tgcaagttcg gcaaccgctt caaacgccct agtgcaattc agccaatcgt tgttaatggg
    33421 taagctcaaa gcccaagaat ttaactcatt gatgacccaa acaccgtctg ttattcaggc
    33481 gattgccaaa gggttaggca ttaccactgc cgaacttaaa gcaatggtgg ataacggtga
    33541 gatgtctgct gaaaaaatga ttgaggggct aaaaaaagca gagagttatg taaacggaca
    33601 gtacgccaaa acaaccacta caattagtgg agcaatgcaa aatctttcaa ctgcggctga
    33661 aaagtgggtt ggcgaaatgg atagtaccgt tggtgcgtca cagaaagccg ttgccgttct
    33721 gaatgcgtta aatgctcatt ttgatacgtt cgctaaaaca gcacttgtcg caggtggtgc
    33781 atttgtgctt ttcaaaggct atatgagtgt acgcccattt atcgaggcta gagcggcgat
    33841 ttatgagaat cgaaaagcaa ttattgcgga aaatcaggct cgccaacaaa cgatagctac
    33901 tcgtcagcag gaattggttg tactctctca acaaaccgcc ttaaaactgg aacaaacatt
    33961 acaaacctac aatcaaaata aagccgaatt agaggcgatt gcggttaaac agcagaaaat
    34021 cacaaaagaa cgagaagaaa ttgctgttgc tattcaagcg gcggcaactc gtacggaaag
    34081 attagcgtta tctgctgaac tgcaagcgct agatcagaaa gaaatcgctc tcgggcaaca
    34141 gaaaatagcg gttgaacgcc agcaaattgc aacaaaacag gctctcaaag tggcgtatgc
    34201 tgaaaatgca gttgctcaaa gtgcaatgaa tgcaggtatg gtcactgcaa ccacaacaac
    34261 cagagcgatg aatggggttt tagcggctgc aagagctgaa ttgaacttac tgaaagcagc
    34321 tgcactgtct aacccattaa tgactcttgc aatggtggca acgactgccg gtactgccct
    34381 ttggggattt tttgaaagtc aaaaagcagc tcgtgaagaa gccctccgct acgcggacag
    34441 cttagactcc gttcgagcca atatcgaaaa aatgactaag gctcaaactg atgcagaaat
    34501 ggttaaattg tctcgttcta tcaaagaaca ggaaacagca ttagctagtc tgaaacaacg
    34561 ccaagctgaa cttacacgag aaatcgagca aggagctacg gttttagatg atgcctttgg
    34621 tgccggtgtc cgtttcgaaa aaagtgcgaa agagttagcg aaagcacaag aagagttaaa
    34681 gttagttact gctgatgttg aaaaagcaca aaatacatta aatgccagtt tagaagctca
    34741 agaagcctta caagctcacg ttccaatcgc taacctacga gaggaatttg tcaaattata
    34801 tcctcacatt gacgaaagcc aaatcaaagt tgatggctta aatattgcta tcggtaattt
    34861 taccgtcaaa tcaccggaga tggttattgc cgctaataac attgctaatg ctcttggtgg
    34921 cgttgccgga gaggctatga gagcggctat tctagtcgct aatctgtcaa gtatgaagct
    34981 ggatgctaac ggtgctgcaa ttatcgatcc taaacatctt gaaaaaatcg agcaaattga
    35041 acgtaacaat gcgattgctt cggctaaagg caaagataaa atcgcattgc aagtaaaaga
    35101 cgctctgatt aaatcaggta tgaaagaggg cgatgccgga tacgagcgac taaaagcagc
    35161 atatgagcaa caatttacgt tgcaaaatgc ccctaagcgc ggcggaaaac cgaagaaaac
    35221 caaagccgaa cgctctgccg aaagttacca aaaccaagta gcggagatga ccaatcgttt
    35281 atccggctta aagatagata aagaagatct cgtaaaatat ggtggcattt ctcaatatca
    35341 ggaagtgcgt aaacttactg aagatattgc tctgaatgct gaaaaatata aaaactacgg
    35401 cactgaaggc gtggctaaac tcaaagagct ggctgctaaa attgattctg aacaacagct
    35461 tttagacatt gagcaattcc aagtcgatca cgataaaaag ctagaggcaa tgcaattcga
    35521 gctggattta ctgggaaaaa ctcgtactga aaaagaattg ttacaattta acaatcaatt
    35581 agatttagag gccgagcggc tgaaaattaa tatgacgaaa gagaatattg ctcttttaga
    35641 tcagaaaatt gccaaaatta aggaagaata cgagctacat cagaaaaagc aggaagaaac
    35701 tcgtgcttct gtaatgatgg gaataaaaga aggctggaac aatattgaaa ccgatgtcag
    35761 caatgtggcg gcaaatgttg ccaatattac tcaaaatacc tttgacggta tggcggatag
    35821 cttgactaat tttgtgatga cgggtaaagc ggattttcgt agttttgcta attccatatt
    35881 atctgatctt agcaaaatga ttatcaaaat gatgttattt aatgctatca aacaaggtgc
    35941 aactatgttg tttggctacc aaggaccgac tacaacggta aatggtaatg ctgtttatgg
    36001 attaggtact tgggcaacag gtggctacac aggcaatggc ggcaaataca ccccagcggg
    36061 tatcgtccac aaaggggaat acgtcatcac caaagaggca acctctcgtc ttggtttgga
    36121 ttatttgaat tatcttaact atggcagacg tggttttgcc tctggcggtg gtgtcgctgt
    36181 accaagagta ccgtcatcat cttatcagcc gaaatcggct caaagtagta tcagcgtaca
    36241 ggtcatcaat aatggtgagc cggtagatgc caaagtcagc caaaaacagc aaggcgagca
    36301 aacgcaaatt actgttgagt taatgcgtaa aattgcccgt caggaagcga acggaatgat
    36361 tcagaacaac tttagagccg gaggagtatt tgcctaatgg aaacattaca atggtgtgtt
    36421 cgcaccgatt tagcggttga aaatacccct gaaataatgg aagtcaaatt cggcgatggt
    36481 tatacccaac gctcgcccaa aggcttaaac aatttattac gagcctatac aggcacaatc
    36541 aaagtgaaaa agggggaaca tttagcggtg gaggcatttt ttgccaaaca tcgtggtgtt
    36601 tccccttttt actttaaaga tccgtacaca caacaaaaca aaaaggtagt gtgtagcagt
    36661 tggcccgcaa aaatggttgg cttaaaccat tgggaattta gtgtaacctt taaggaagta
    36721 ccctaatgcc tgttagcata tccaatcaaa tgaaactcga ccttgccaaa cttgagcaaa
    36781 atgcaatgct tgatttgtac gaggtagatt tacgcacatt aaaggataaa agcggtaatg
    36841 ctggctcagt ttaccgcttt tattcggggt taaatgaact caaaacaagt attgtctggc
    36901 aagggcggac ttacgatccg tacccgattg aggcaagtgg atttgaacga aacagtagcg
    36961 gcccaagcaa tcgccctact cttacgctat caaatctgtt tggcttagtt acgggtattg
    37021 ctaatcagtt tgatgagtgt atcggggcga ttgttcgccg tcatcaggtt tacgcccaat
    37081 atttagatgc cgtgaatttt gccgggggta atgcgaaagc tgatccaaat caggaaataa
    37141 tcagtcattt tgtgattgag cagcttacca gcctcacccg agaaacggcg acctttacgc
    37201 tggcattacc gattgaaact gataatgcca aaatccccag cagaattatt atggcggaca
    37261 cctgcacttg gatttaccgc tcggcggaat gtggttatac cggtaagcaa tattttgatg
    37321 aaaaagacaa ggcaacatca gacccaaaag ccgataaatg cagccattgc ctgaacggtt
    37381 gtgaattgcg aggcaatcag cgtaattttg gtggatttgt atcggtgaat aaattggggt
    37441 aatgaatgga attggaacaa caaataatcg actacgccct ccaacacgaa ccgcacgaaa
    37501 tgtgcggctt tgttgttttt gacggcaata aaaatcgatt tatcccttgc gaaaaccaag
    37561 cggaagacaa agccaattac tttgaaatat ccgatcttga ttacatcaaa gcagaagaaa
    37621 aaggcgaact ggtagcggtg gtacattcac atcccgagcc aaacggcaag cctatattat
    37681 ctgtgcttga tcgcaaaatg caggtacaga ccggtttaga ttggtggcta gtgcataatc
    37741 ggcaaatcca taaattccgc aatgtaccac atttaatcgg gcgtgagttt aaacacggca
    37801 caatggattg ttacacgctc taccgtgatg cctatatgct tgccggttac gagatggacg
    37861 aattcgatcg acaagatgac tggtggcata ccgggcaaaa tctttatttg gataatatcc
    37921 aagggcaagg ttttgagcga gtgggaaccc cacaaatcgg cgatgtgatt ttaatgcaag
    37981 taggtgctga tgtgccgaac cacgctgcca tttacattgg cgaacagatg gtaatccatc
    38041 atagcccgaa ccgattatct aagcgtgatt tatacgacgg ctattggtta cgtcataccc
    38101 acagcatttg gcggcataaa ctggcggata agttagattt tgacggcata ttgaatgata
    38161 ttgctgtaaa taactaacaa aaaatgaccg cttgtaacaa aaacaaaccc cgaagcgttt
    38221 gcagcacttc ggggtttttc atatccactt acctaactaa gaggacataa attaaatgaa
    38281 tgataaacga tttacattca aatttctagg agttcttatg gaagcaatta atattacccc
    38341 aaaagaaatc agaaaaacaa tgtggacagc cgcaataatt ctctttttgt ttgcgttcat
    38401 ctggaaagcc cctgaattta tcactgctat tcgttggtgg taactatgat tacagttaaa
    38461 ttttacggac acttaagaaa atttggtaca gactttaagc ttgaggtaaa agacaccgct
    38521 gaggcaattc gtgccttatg tacacagatt agaggattgc gtgaggcatt gcgagacggt
    38581 gtttataaag tccgtatcgg taagcaatat ttagacccat cagcccttga aaaagggctt
    38641 ttttattgct tgaagaaagg gcaaaccatt cattttaccc ctgttatcaa aggggcgaaa
    38701 agcgggggtg ttttccaagc tgtgttaggt gtagccttaa ttggagccgc attttttctc
    38761 gggccggtcg gttggggagt tctaggggct tcttccgcaa tgatgatggg agcaatgggg
    38821 gcatcaatgt tactaggagg agtttcccaa atgctcacca aaatgccaaa agcccccaca
    38881 atgggtaatg aaacagaaaa agaaagctca acggcttttt caaatttaaa taacttggtg
    38941 gctcaaggca aacctgtgcc gttggcttat ggcttaattc ggaccggctc gcttgtgatt
    39001 tcacagggag ttgagacgat gactgtagag gtataattat gggattattt agtcgtaaga
    39061 gaaaaaatca tactcctaaa gaagcaccgg aaactggtcg ctctaaacag attgtgaata
    39121 tcgtggagtt actctgcgag ggtgaaattg aaggcttggt agatggcttt aaatcgattt
    39181 atcttgacgg cacgaaaatc caaaacgatg acgacagcta taattttaat aatgtgagcg
    39241 gtcagttaaa tgtcggtacg caagatcaag aggtattaga aggttacgac agctcacaaa
    39301 atgaagtgag tgtgggtgta gaagtcaaga aaaaaaacgg tgcaatcgtc cgcaccgtta
    39361 ctgatgaacg catcagccgt ttgcgtttaa cgttgggcgt gcggtcacta ttcca
//
LOCUS       DANMCL010000008        39296 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.008, whole genome shotgun sequence.
ACCESSION   DANMCL010000008 DANMCL010000000
VERSION     DANMCL010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39296
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.008"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            126..2234
                     /gene="gshAB"
                     /locus_tag="PXF40_000406"
     CDS             126..2234
                     /gene="gshAB"
                     /locus_tag="PXF40_000406"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HDL5801783.1"
                     /translation="MKLQKLIRENHLALLFQQGNFGLEKESQRVDRNGNIVTTPHPAV
                     FGNRSYHPYIQTDFAESQLELITPPNAKLEDSFRWLSAIHEVVLRSLPEEEYIFPLSM
                     PAGLPPEEQIQEAQFDNPEDVQYRQHLSKNYGKYKQMVSGVHYNFQLSTEFVEKAFAL
                     QTEYSELKAFQNALYMKLANNFLRYQWILLYLLAATPTVESQYFYEKSPLARGQLVRS
                     LRSSPYGYVNSEKVVVNHDSLESYVESLEANVANGLLIAEKEFYSNVRLRGGKKAREL
                     LENGVKYAEFRLFDLNPFAPYGIELNDAKFIHYFLLGMLWLEETSGQKEVEIGKRKLY
                     QVALEDPRTETAFRAEGEAILNQLLAMLEELSAGQESLDLVREKLAQFADPSKTLNGR
                     LIAAIEEVGSYKALGAKLAQTYKAQAFERFYALSAFDNMELSTQALFFDLIQQGIEVE
                     VLDENDQFLALKFGDHLEYVKNGNMTSRDQYISPLIMENKVVTKKVLAKAGFNVPKSV
                     EFTNLEQAVAHYPLFEGKAVVIKPKSTNYGLGITIFQQAVKNREDFAKAVEIAFREDK
                     EVMVEDYLVGTEYRFFVLGDETLAVLLRVPAKGQTVQLRANSNISTGGDSIDMTDQMH
                     ESYRQIAVGIAQAMGAKVCGVDLIIPDLTKPAEPNLSSWGVIEANFNPMMMMHIFPYQ
                     GKSRRLTKAVIKMLFPEIGN"
     gene            2556..3533
                     /gene="manX"
                     /locus_tag="PXF40_000407"
     CDS             2556..3533
                     /gene="manX"
                     /locus_tag="PXF40_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HDL5801784.1"
                     /translation="MSIAIIIATHGVAAEQLLKTTEMLIGEQEDVAYIDFVPGENAET
                     IMGKYQALVEGPLSHCDQVLFLVDMWGGSPFNAANRFQDGKSGMDVVAGVNIPMLVNT
                     CMARDDVESLEELVEVALEAGSTGIRSLNHQPEVAEVQTATPAQETAAVQQPEIVDDG
                     RRMTIALARIDDRLIHGQVATVWTKESKVNRIIVVNEGVAKDSVRTTMLKSVAPLGVT
                     AHVVDVPKMIRVYNNPEYADDRVMLLFTNPSDVLALIEGGVPLNSINVGGISHKEGKQ
                     MVSHSVAVDQNDIDAFKAIDAKGVELEVRKVSSDSRQYMMDLLKKHNLI"
     gene            3545..4345
                     /locus_tag="PXF40_000408"
     CDS             3545..4345
                     /locus_tag="PXF40_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005716709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HDL5801785.1"
                     /translation="MELSALQIVLLFLVACISGMGSILDEWQTHRPLIACTMIGLVLG
                     DVTTGVIVGGSLELLALGWMNIGAAVAPDAALASIVSTILVIVGRQDISTGIAIAIPL
                     AAAGQVLTYVVRAITVGFQHAADKSIEDGNLSRLDWLHRGALLLQAMRIAIPALIVAL
                     TAGTDAVQTMLNAIPEVVTTGLKIAGGFIAVVGYAMVINMMRAGHLMPFFFAGFVIAG
                     FTDFNLVALGVLGTVIAMVYIHMHPKYNKSQQVVVAAAPKNDLDNRLD"
     gene            4359..5195
                     /locus_tag="PXF40_000409"
     CDS             4359..5195
                     /locus_tag="PXF40_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005564636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HDL5801786.1"
                     /translation="MTTEIKKVTKSDLNAVVRRSNLFQGSWNFERMQALGFAYAMVPV
                     IKRLYPDPNGPGRKEAIKRHSEFFNTQPFVGAPILGVTIAMEEERANGKEIDNAAING
                     IKVGLMGPLAGVGDPIFWGTVRPVFAALGAGLALKGELLGPILFFALFNIVRLAARYY
                     GVVYGYKKGLDVVQDMSGGLLQKLTEGASILGLFIMGALVQKWTSINVPLVLSTIQKQ
                     DGTIEVTTVQSILDSLMPGLLPLLLTFACMWLLRNRVNAIWIILGFFVIGILGAATGA
                     LA"
     gene            5288..5773
                     /locus_tag="PXF40_000410"
     CDS             5288..5773
                     /locus_tag="PXF40_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HDL5801787.1"
                     /translation="MTNTILILFILLGLVFAIYDQVFMHKLKGTTLLEIRLKKQKTID
                     TWLLIGLIVLSISYGVQNQIQPFTLYLLATCIILSVYLAFFRSPRLLLKQHGFFFANV
                     FFNYDKIYQVNIAEGKADEKILVIDLHSGRRLLAYVENAEDLQPVVDFFGGYKKESEQ
                     K"
     gene            complement(5859..6650)
                     /gene="tpiA"
                     /locus_tag="PXF40_000411"
     CDS             complement(5859..6650)
                     /gene="tpiA"
                     /locus_tag="PXF40_000411"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HDL5801788.1"
                     /translation="MARRPLVMGNWKLNGDKAFTKTLIADLKAELHGVEGCDVAIAPP
                     VMYLAHAEASLAGCGCGCSDKGLIALGSQNVDVNVKGAFTGDISPEMLKEFGAKYIII
                     GHSERRTYHKESDEFIAQKFKVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVI
                     NAHGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHIAAKSQAVADQVIIQY
                     GGSVNDANAAELFTQPDIDGALVGGVSLKAPAFAVIVKAAAAAKA"
     gene            6810..7724
                     /locus_tag="PXF40_000412"
     CDS             6810..7724
                     /locus_tag="PXF40_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HDL5801789.1"
                     /translation="MKLNYLYSPPQAVGRLKAEYADFIVREELGYELAGEGEFVAVKI
                     RKTNASTLFVGEKLAKFVGISEREMSYAGLKDRHNRKIRVGSLAGNHFELLLRDVAES
                     EELIYRLQQLQAVGFPNYFTEQRFGRDGHNLTQALRWANGEISVKDRKKRSFYLSAAR
                     SEVFNLVVSQRINDCLTQKILENDYVQLAGSNSFFCVKSDEIAETQARLAQQDLLLTA
                     PLIGERSLELECNPAEKAIIEQHAQLVALMQKERMAAARRAMLCKPQNLEWQFEQEGL
                     RLKFFLDSGSYATALVRELILLTEESEA"
     gene            7895..8683
                     /gene="surE"
                     /locus_tag="PXF40_000413"
     CDS             7895..8683
                     /gene="surE"
                     /locus_tag="PXF40_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HDL5801790.1"
                     /translation="MRILISNDDGFHAVGIQTLAKALRDAGHIVTIIAPDRNRSAASS
                     CLTLVDPLRVHRFDEYNYAVIAGTPADCVHLALNGLFDGKFAEKFDLVVSGINHGANL
                     GDDVVYSGTVAAALEGRHLPLPSIAVSLVGRKHSSFLDGENHFGTAAQVVLDLLEKME
                     TQRFPSNHVLNVNVPNLPYSELKGTMITRLGERSPAAEIVKQKDPRNADVYWIGVTGE
                     PLDESFGTDFYALNRDCVSITPIQVDMTAHKTIATLKGIFNETV"
     gene            8670..9254
                     /locus_tag="PXF40_000414"
     CDS             8670..9254
                     /locus_tag="PXF40_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5801791.1"
                     /translation="MKLFETIYDKTMQWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLI
                     PMSMAKPQNAFKYAVYTTLASVAGGVIGYFIGLYATDWVQGVIANWGMQANFDKAKLW
                     FETWGVAVVFLAGFSPIPYKVFTICAGVMQMAFFPFVITAAISRFARFILVAKLSAWG
                     GKKYEQKIRRSIELIGWGTIVLAVVAYIIYTLMK"
     gene            9272..9772
                     /locus_tag="PXF40_000415"
     CDS             9272..9772
                     /locus_tag="PXF40_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HDL5801792.1"
                     /translation="MKKSLFVLSLISFALVGCSSNSGESTSAVETTEANATWQSADSI
                     QTAPMPASMNQPIATQPTYQQPTYSAPQPISAAPAPMPVSSGSDSSQVETVGNCQVVR
                     DANNAPIYSQITKGCYTESHYTVGKSDTLYLIGYLTGTNANQIAQLNGLNTGSPLKVG
                     QVLRVR"
     gene            9785..9985
                     /locus_tag="PXF40_000416"
     CDS             9785..9985
                     /locus_tag="PXF40_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801793.1"
                     /translation="MNRTLLAFAISCAFLTACSSPTQPQVEDPNMLPAGTLQPIEGSG
                     ASQDSYSWPSDIQSTSMPDSMK"
     gene            10004..11284
                     /locus_tag="PXF40_000417"
     CDS             10004..11284
                     /locus_tag="PXF40_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5801794.1"
                     /translation="MKKQFILLPLVSAVLAACSSNNPAPVVNASGNNELSPGVMQPVD
                     VSAGAINSSGGWQSDIQSAPMPSSMNTTPVQTMPQPVSVPQPVATVPQPITNPVITEQ
                     PPQPTTTTKIVKKTKTVEKKVDQNFEIPRDANNAPMYNQIQKGFYDGSTYTVRKGDTM
                     FLIAYIVGKDVKEIAALNNMSEPYQLSVGQKLKTGKSATETITVEEKVTVPVEPQITY
                     QQGANGTTYASGGNITGPVKAGTANADVTPVNNGIKATTATAPAVTASVGTVNATEDR
                     TASTIRAIDGTASGAVQSSNTVSAPASSIKWQWPTSGRVISGFSSAEGGNKGIDIAGN
                     KGQDVRAAAAGKVVYAGNALQGYGNLIIIKHTDDFLSAYAHNNTIEVDEQETVKAGQK
                     IATLGSTGTNTNKLHFEIRYKGKSVDPARYLPRK"
     gene            11525..11716
                     /locus_tag="PXF40_000418"
     CDS             11525..11716
                     /locus_tag="PXF40_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801795.1"
                     /translation="MDPTEPSHRIYILLSEDRFQAEVFSTKLSESSMLLEAVKGGYIS
                     KDGKVRLLKKAEGWKIYYE"
     gene            11709..12275
                     /locus_tag="PXF40_000419"
     CDS             11709..12275
                     /locus_tag="PXF40_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HDL5801796.1"
                     /translation="MSETKIRCDWCKSSEIYMKYHDEEWGKPEFDSLKLFEKICLEGQ
                     QAGLSWITVLKKREAYRQAFHQFNPEKIAKMGEEEIDLLMQNTSLIHHRAKLEAIIKN
                     AKAYITMQQNGEDFSRFIWSFVNYQPQINDVPTLEAVPAHTETSKAMSKALKKRGFVF
                     VGETTCYAFMQSMGLVNDHLNNCVFKHK"
     gene            complement(12322..12552)
                     /gene="acpP"
                     /locus_tag="PXF40_000420"
     CDS             complement(12322..12552)
                     /gene="acpP"
                     /locus_tag="PXF40_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HDL5801797.1"
                     /translation="MSIEERVKKIIVDQLGAKAEDVKPEASFIEDLGADSLDTVELVM
                     ALEEEFDIEIPDEEAEKITTVQSAIDYVQNNQ"
     gene            complement(12739..13416)
                     /gene="rpe"
                     /locus_tag="PXF40_000421"
     CDS             complement(12739..13416)
                     /gene="rpe"
                     /locus_tag="PXF40_000421"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HDL5801798.1"
                     /translation="MSKNPYLIAPSILSADLARLGDDVAEVLKAGADLIHFDVMDNHY
                     VPNLTFGPAICKALRDYGIQCPIDVHLMVKPVERLIPDFAKAGADYITFHPEATEHID
                     RNLQLIRDLGCKSGLVFNPATPLSYLDYVMDKVDVVLLMSVNPGFGGQSFIPSTLDKL
                     KEVRRRIDESGYNIRLEVDGGVKINNIADIAAAGADMFVAGSAIFDQPDYQAVIAQMR
                     DELRKVG"
     gene            13610..13882
                     /locus_tag="PXF40_000422"
     CDS             13610..13882
                     /locus_tag="PXF40_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HDL5801799.1"
                     /translation="MKKGIHPENYREVLFYDASVQQGWVIRSCAATNKTMVWEDGKEY
                     PLYTLDTSSASHPVYTGKRREVNTEGRASQFKDRFKGFASTLSNQK"
     gene            13891..14016
                     /gene="ykgO"
                     /locus_tag="PXF40_000423"
     CDS             13891..14016
                     /gene="ykgO"
                     /locus_tag="PXF40_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HDL5801800.1"
                     /translation="MKILNSLKTAKSRHPDCQIVRRKGKLYVICKTNPRFKARQR"
     gene            14196..14969
                     /locus_tag="PXF40_000424"
     CDS             14196..14969
                     /locus_tag="PXF40_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5801801.1"
                     /translation="MLKKLSIAALALTLSVSAFAKESLLERINNKGTITVGTEGTYAP
                     YTYHDASGKLTGYDVEVTRAVAEKLDVKVEFKETQWDAMLAGLKGERFDLVANQVALT
                     SPERRATFDKSESYSWDGAALLVREDETKIKTPADVKGVKTAQTLSSNYGEIARENGA
                     DIVPIDGMAQGLLLIQQKRADATFNSHLSLLDYLKKNPNSGLKIVWEKEEKVGAGLIA
                     NKGNDEALAKISKAIVELREDGTLKKLGEQFFGKDISVQ"
     gene            15052..15768
                     /locus_tag="PXF40_000425"
     CDS             15052..15768
                     /locus_tag="PXF40_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HDL5801802.1"
                     /translation="MLNDLLLSIPFMTQARVDLVLSGFWPMVQAAFLVSIPLAIASFI
                     IGMLIAVAVALVRISPATGFFHRLLLWLVKGYISIIRGTPMLVQICIVFYGLPAIGIF
                     IDPIPAAIIGFSLNIGAYGSETIRAAISSVPKGQWEAGYTIGMTYMQTFRRIIAPQAF
                     RVAVPPLSNTFIGLFKDTSLASVVTVTEMFRVAQQVANMSYDFLPVYIEAGLIYWCFC
                     WVLFLIQARLEVRFNRFVAK"
     gene            15778..16530
                     /locus_tag="PXF40_000426"
     CDS             15778..16530
                     /locus_tag="PXF40_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HDL5801803.1"
                     /translation="MLKIRNIHKTFGNNAILRGIDLDIQKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEQGTLEFSGNAPLKIDFAVKQSKKEILALRRKSGMVFQNYNLFPHKTAL
                     ENVMEGPVFVQQQAVEIAQKNAKALLEKVGLADKAELYPFQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNTMKELANEGWTMVVVTHEIKFALDVADVVVVMDG
                     GEIVEQGSPQQLFNHPQHERTKRFLNQIRADK"
     gene            complement(16746..17279)
                     /locus_tag="PXF40_000427"
     CDS             complement(16746..17279)
                     /locus_tag="PXF40_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HDL5801804.1"
                     /translation="MEFLAPVISLIVGFLSFVLVLRTWLQFCRVDPRLPISQTLLKIT
                     EPMVSPVGKLIPTVKNICFPALLIAAALVTLQFILFGVDLPRAVLIGLLSVVKTFGQI
                     LFFTTLIRALMSWVTQGNHPLDYTVAQITEPVLGFIRKLLPRTGMLDFSVMVLGFGLL
                     LLNSLFYQIFGGLWAAA"
     gene            complement(17385..17726)
                     /locus_tag="PXF40_000428"
     CDS             complement(17385..17726)
                     /locus_tag="PXF40_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HDL5801805.1"
                     /translation="MAIQRNARQRKKMHLGEYQELGFLIKFTFAEGTGIDQIDETVDR
                     FIDEVIRPNGLALEANGYLNWEGLVCLEKLGKCDESHRQLVKTWLETNGLKEVQVSEL
                     FDIWWDYPAQA"
     gene            complement(17750..18499)
                     /gene="trmB"
                     /locus_tag="PXF40_000429"
     CDS             complement(17750..18499)
                     /gene="trmB"
                     /locus_tag="PXF40_000429"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HDL5801806.1"
                     /translation="MSEKQTFADKKRKTVEQAEFTEDGRYLRKVRSFVLRTGRLSDYQ
                     RDMMNNNWANLGLDYQPMPFNFEQIFGNNNPVVLEIGFGMGKSLVEMAEQNPNRNYIG
                     IEVHTPGVGACIAYALEKGVKNLRVICHDATEILRDSIADGTLGGLQLYFPDPWQKAK
                     HHKRRIVQPEFISRVIRKLSPNGFIHFATDWENYAEHMLEVLRQFESELQNTSATNDF
                     IPRPNFRPLTKFEERGHRLGHGVWDLYFTKK"
     gene            complement(18509..19459)
                     /locus_tag="PXF40_000430"
     CDS             complement(18509..19459)
                     /locus_tag="PXF40_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HDL5801807.1"
                     /translation="MNSRILATGSYLPTKVRTNADLEKMVDTSDEWIVTRSGIRERRI
                     AEPDETVATMGAKAAQQALEMAGIEANDIDLIVVGTTTNSHAYPSAACQIQGLLQIED
                     AIAFDVAAACTGFVYALTVADQFVRNGQVKKALVIGSDINSRMLDETDRSTVVLFGDG
                     AGAVILEASEELGIISTHLHASPDLENNLTLRSQKRGEERSGFIEMQGNATFKIAVNQ
                     LSSVVEETLEANNLQKSDLDWLIPHQANLRIITATAKKLEMEMDQVVVTLDKYANTSG
                     ATVPVALDEAVRDGRIQRGQLLLLEAFGGGWTWGSVLVKF"
     gene            complement(19605..20624)
                     /gene="hemB"
                     /locus_tag="PXF40_000431"
     CDS             complement(19605..20624)
                     /gene="hemB"
                     /locus_tag="PXF40_000431"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HDL5801808.1"
                     /translation="MQVIQSQYPLRRMRRLRKHDFSRRLVAENQLTVNDLIYPVFVIE
                     GENQRVQVPSMPGVERLTIDQLLVEAAELVKYGVPAVALFPVVGDVKKSLMAEEAYNP
                     QGLAQRAVRALKAQFPELGVITDVALDPFTTHGQDGIIDETGYVLNDVTTEVLVKQAL
                     SHAEAGADIVAPSDMMDGRIGKIREALEQNGFINTQIMAYSAKYASNYYGPFRDAVGS
                     AGNLKGGNKYTYQVDPANGNEGLHEVAMDIQEGADMVMVKPGMPYLDMVWRVKENFGV
                     PTFAYQVSGEYAMHMAAIQNGWLKERECIMEGLLCFKRAGADGILTYFAKRVAKWLYE
                     EAQAK"
     gene            complement(20705..21460)
                     /gene="tatC"
                     /locus_tag="PXF40_000432"
     CDS             complement(20705..21460)
                     /gene="tatC"
                     /locus_tag="PXF40_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HDL5801809.1"
                     /translation="MSQVDESQPLITHLIELRNRLLRSFICVLLVFCGLVYWANDIYT
                     LLATPLTDNLPDGATMIATNVATPFFTPIKLTIVVSVFLSVPFILYQIWAFVAPALYK
                     QEKRLVYPLLVSSTLLFYCGVAFAYYVVFPLVFGFLTSTAPEGVTMATDISSYLDFVL
                     TIFMAFGICFEVPVAIILLCWAGVTTPEDLKAKRPYIIVAAFVIGMLLTPPDIFSQTL
                     LAIPMCLLFEVGVLFARFYRPKDDDEPSEQVAQ"
     gene            complement(21447..22091)
                     /gene="tatB"
                     /locus_tag="PXF40_000433"
     CDS             complement(21447..22091)
                     /gene="tatB"
                     /locus_tag="PXF40_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HDL5801810.1"
                     /translation="MFDIGFSELVLIMIVGLVVLGPKRMPIAIRTVMGWVSTIRGLAA
                     NVQNELAQELKLQELKESIKKAEELNLSSLSPELNKTVEDLKMSATQLQDSLNSAKNE
                     LEKTAAESSTIPKLTDEQVAEIQQKIEQESQVLEAQELQKNAQNKPLEVDSLSEQLNV
                     TRTEKPLSADELAEQAEMDESLLTLESYYPPDDDLATPQSSESAQKSEANNVAS"
     gene            complement(22095..22316)
                     /gene="tatA"
                     /locus_tag="PXF40_000434"
     CDS             complement(22095..22316)
                     /gene="tatA"
                     /locus_tag="PXF40_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HDL5801811.1"
                     /translation="MGGISIWQLLIVVAIIVLLFGTKKLRTLGSDLGESVKGFKKAMA
                     DEKKDAEFEKVEAKDAISAEQKAKEKEQA"
     gene            complement(22427..24064)
                     /gene="ubiB"
                     /locus_tag="PXF40_000435"
     CDS             complement(22427..24064)
                     /gene="ubiB"
                     /locus_tag="PXF40_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HDL5801812.1"
                     /translation="MNIKNLNRFYHIIRTFLRYGIDEAIPNLPITRKIKLGRKALFWV
                     KNQHSDKPYGVRLRLALQELGPVWIKLGQMLATRRDLFAPELADQLALLQDNVEPFDG
                     KIARQIIEQALGGKLETWFENFDETALASASIAQVHTAKFNQNQPLAGKDVVLKVIRP
                     GIEPVIKADLELMYEIAHFIPKLSNDGKRLRAVEVVREYEKTILDELDLRKEMHNAIR
                     LRANFENSEMLYVPEMYQDFCHKNLIAMERIYGIPVSNIAELEANSTDMKLLAERGVQ
                     VFFTQVFRDSFFHADMHAGNIFVNREHPENPQYIGIDCGIVGTLNHNDKRYLAESFVA
                     FFNRDYRRVALMHVESGWTPPDTDIDKFEQAFREVCEPIFAKPLSEISFGHVLLNLFN
                     VAREFNMEVQPQLVLLQKTLLYIEGLGRQVYPQLDLWQTAKPFLQNWLNEQVGVKAMV
                     RDIKQRLPQYREHFAEFPEALFKALQEQKQINFRLAEINESLKAQNSNANSRFLVLSI
                     SAIVICGAFWKFESLPIWLSVPLLTLFPLVLILSQRK"
     gene            complement(24138..25115)
                     /locus_tag="PXF40_000436"
     CDS             complement(24138..25115)
                     /locus_tag="PXF40_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5801813.1"
                     /translation="MKQIIAQARENAVRAVDFQRVLMYWHIGKRIFEQEQQGQERADY
                     GTYLIKMLAKELEPEFGSGFCSRQLERYRQFYRAFPIATALRSQLNWTQYRRLIQISD
                     SDKREFYLAESCKNNWSSRQLERQINSSLYERLLLSNDKESVLAVARNEQQPVDPKQL
                     IKDPMVLEFLGLKRESAYYEKDLEQAIITHLQDFLLELGNGFSFIARQKRLHLDGDDF
                     FVDLVCYNRLLQCFVIFEIKTHKLTHQDLGQLQMYVNYFDRVEKLPHENATIGVLLCA
                     DKNDAVVKFSLPENQNKIFASQYQLYLPSEQTLIAEVQKEIENFEQKYP"
     gene            complement(25276..25923)
                     /locus_tag="PXF40_000437"
     CDS             complement(25276..25923)
                     /locus_tag="PXF40_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HDL5801814.1"
                     /translation="MLNNVKQQLMLPQFTFGLIETAFNALLKRSPHIEPNLRKLSGKV
                     LKIALTSPKIDFFVLFSESRTDWLGNYEGEADCTVQLAFDTLPKLADKQKLTELINNK
                     SLVLTGDIQVLQHFTALLEQLEKDPAELLSPFVGDVVAQTSTDLAKKLLGKVKAQFEQ
                     NNQHLVENLIQERPVLVHRLQAVHFYDQVEELAQQALKLEQKFTHYVRSSSHQQS"
     gene            complement(26114..26866)
                     /gene="ubiE"
                     /locus_tag="PXF40_000438"
     CDS             complement(26114..26866)
                     /gene="ubiE"
                     /locus_tag="PXF40_000438"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HDL5801815.1"
                     /translation="MQQSAETTHFGFKTVAKEEKQQLVANVFHSVAGKYDLMNDLLSF
                     GIHRVWKRFTIDCSGVRKGQKVLDLAGGTGDFTAKFSRIVGESGEVILADINSSMLEV
                     GREKLRNLGVVGNVSYVQANAECLPFADNTFDCIVISFGLRNVTDKDKALRSMFRVLK
                     PGGRLLVLEFSKPIIDPISQLYNFYSFNILPKVGEVVVNDAESYRYLAESIRMHPKQD
                     ELKAMMEQTGFESVNYYNLSAGIVALHRGYKF"
     gene            27211..28164
                     /gene="corA"
                     /locus_tag="PXF40_000439"
     CDS             27211..28164
                     /gene="corA"
                     /locus_tag="PXF40_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HDL5801816.1"
                     /translation="MIRAFGLDNACLISVDETNPTLLNDAIWIDLIDPSEAERTVLEN
                     RLDQTLAEERELEDLEASARFFEDEDGLHLHSFFYCLDDDDYADIATVAFTIRDGRLF
                     TLRDRDLPAFRLYRMRSRREKLIDSNAYELLLDLFETKIEQLADVIEEVYADLEKLSR
                     VILNGQQENENFNDALSRLTEFEDASSKVRLCLMDTQRALSFLLRKTRLPNNQLEQAR
                     DIMRDIESLQPHNESLFQKVNFLMQAAMGYINIEQNRIMKFFSVVSVMFLPATLVAST
                     YGMNFEFMPELHFQYGYPMAIGLMIVAASAPYLYFKRKGWL"
     gene            28317..30122
                     /locus_tag="PXF40_000440"
     CDS             28317..30122
                     /locus_tag="PXF40_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HDL5801817.1"
                     /translation="MLSKLQRFTLMIKSTIIKHPLEILFVTYVTILLINNVSDYELIK
                     RFQNLIALFPICFILLYLIRDTKAYWLFAPIPIAIVFFFGQINLTLLEDSRYWATIFC
                     VFLCLISQYWYKNNHYFVAGTTNKLVNIVFATVLSGIIFATLSAITIAIIALFDLNKQ
                     NNFHIFEKFGIFSSFWAFPVLFLTLEQQTTNDSRYLNRISEMLLNWILSPALIIYTAI
                     IYAYVIFIAAKGQMPDGVVANVALPYLAFGLAIQAVQLLLKNAKWQWFYSHFTYLALL
                     PLTLIWYAIYIRFSHYGLTEARIYLVIGTITLSICYTLLLFKQLAQYRLFSAVSIAII
                     LISVFILDPKTVALKDQTKRLDNYLLKHKLLDVNNKISTKAVLKYQESLNENRDEAEY
                     FYSMLHYVARGMPAAQFKEKYGVNSSYDLMSEIRERNTDPRYFEATNSELVRLTKADM
                     ANAREYITFSSQLYRPNSFSHQKIENKLCQKLLSQGYYFEGNILNIEYQYSETAQDCS
                     SITQDPTEFVIYFKGLGTTIEFNINDILKKIFAKHQLSITQQHKNEVLEKIKGDLLKM
                     DLGNSVLGLKHIELRFEDNIGYIVESISTQYIMLK"
     gene            complement(30165..33194)
                     /locus_tag="PXF40_000441"
     CDS             complement(30165..33194)
                     /locus_tag="PXF40_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4981 domain-containing protein"
                     /protein_id="HDL5801818.1"
                     /translation="MSLPNYYQDPSVLHLNTTLHHAYFIPFAKGQTPNQLEREQSELF
                     TLLNGDWKFNFYPSPHDLPEDFLNTKFTHQIPVPSNWQTQGFDAHQYTNINYPIPFDP
                     PYVPHQNPCGVYQREITFNPKPNKRYLLNFEGVDSCLFVYVNGEFVGYGQISHSTNEF
                     DITKQLKQGKNSLVVVVLKWCDGSYLEDQDKFRMSGIFRDVYILEREQNYLQDFFIRY
                     QLNADLSKAELKVETQFSTYTEAVHFQLFDPENRLVCEQTSGDFCQEICNLCLWNAED
                     PTLYTLCLSYQNEIIEQKIGFRQIRVENGVMLFNNAPIKFKGVNRHDSDPKTGYSISR
                     EQALVDLRLMKAHNINAIRTAHYPNAPWFSELCDQLGFYLIAESDLESHGSSAVYIES
                     PENSIFLNVPNPNKQEEIRQQAVDNFCYFARDPLFKQAILDRNIANVERDKNRTSVII
                     WSLGNESGFGENFEVAARWVKQRDPSRLTHYEGSIYQHSAHQNDLSNLDLYSEMYPST
                     ERLEEYFSDSANHKPFILCEYSHAMGNSSGDMEDYWQTFQRYSGACGGFVWEWCDHAP
                     LLPNSELSAEQKTEKYGYGGDFGETLHDGNFCMDGLVSQQRVPHSNLLEVKNVNRPVR
                     AELKAGKIWLKNQLDFSDLADYLTVHYCFSENGETTLQGQCLVNCQPNQTACLPLTLP
                     EPNGKLQLLTLDYSLNESTALLEKGHHLGFDQITLHQAMVTPALNPRPQAVIFVQDFA
                     NEWRIQQGDYRYTFDKLKGIFSRIEKNGEAVIEQPLDFNIWRAPTDNDRLIREFWKKA
                     GYDNCYTRAYHTELMQDKNGVNITAECGIVATAQSRILTLKVNYHLAPNGEMTIQVQA
                     TRPAHLPFLPRFGLRFFLNKRNNQVSYFGYGEQESYIDKYHLAKLGAYQTSARENHTD
                     YLKPQENGSHFGTHYVQANGITVTSPQPFSFNLSPYTQEELTTKSHSYDLVESPSTVL
                     CVDYKMSGIGSNSCGPNLKPQYRLNETNFEWLLKLSF"
     gene            33372..34229
                     /gene="menB"
                     /locus_tag="PXF40_000442"
     CDS             33372..34229
                     /gene="menB"
                     /locus_tag="PXF40_000442"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005723289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HDL5801819.1"
                     /translation="MLYPSEEFLYAPVEWVDHSEGYTDIRYHKSKDGIAKITINRPEV
                     RNAFRPQTVKEMIEAFSDARFDEKIGVIVLTGEGEYAFCAGGDQKVRGDYGGYKDESG
                     VHHLNVLDFQRDIRTCPKPVVAMVAGYAIGGGHVLHMLCDLTIAADNAKFGQTGPKVG
                     SFDGGWGASYMARLVGQKKAREIWFLCRQYNAQEALDMGLINTVVPYADLEKETVRWC
                     REMLQNSPIALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREP
                     DFSKFRRNP"
     gene            34312..36714
                     /gene="mrcB"
                     /locus_tag="PXF40_000443"
     CDS             34312..36714
                     /gene="mrcB"
                     /locus_tag="PXF40_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1B"
                     /protein_id="HDL5801820.1"
                     /translation="MSDVELNEQSEQEPEQKPKKRNYFLSTLFKIGVIGACSMAFYGI
                     YLDGKIRSKMDGQIWELPAEVYARIESIKIEDNLTLEQTKQALLDNGYRQVSQVATPG
                     DFKIEENQLVLLRRAFPFPETPESQRVLRLTFKQDKLTYIEDLVQGKLIEEFRLDPKL
                     LALLHSDSDEERQALRLQQYPRLLIESLILTEDRRFYQHDGISPIGIARALITNYQAG
                     RTVQGGSTLTQQLVKNLFLSNERSLVRKVNEALMSVILDFRYDKNRILETYLNEIYLG
                     QNGSYQIHGFALASQFYFGRPIQEISLDQIALLVGMVKGPSLYNPWRNPQGAVERRNV
                     VLRLLLDHQVINQELYALLSSRPLNIREKGTIYREQPAFMQALTIDLKNELGEIKSAQ
                     LSGTKIFTTLDRKQQRSAEQAVITGLEDLESKNKKVSDLQSAIVVAEYRTGKVRAIVG
                     DRLTQFAGFNRAIQSKRQIGSLVKPSVYAIALAQPELFRLNTPIQNKQISIKVGSTYW
                     TPRNYDRSFSGSVMLMDALVRSLNIPTVNIGMKVGLKKVIAKQKEMGWDNAEIPPYPS
                     TLLGSYSISPYDVTRSYQVIANEGLKTPLTTIEAIISHNGEMFYQRDSGKVSEQVLPP
                     EAAVQTMYAMQQVVERGTARSLQNDFAKLKLAGKTGTTNNARDTWFVGIDGEHVTTVW
                     LGKDNNGDTNLTGSSGALYVYKQYLERALPQAYRLPKLNTMQWVGINSYGSWNCDSGR
                     QIPVWRDKGQRYCTSAGNVVATEKPSVWDALSLKKENIEAKAEEAEGKQPIPTEEVAP
                     IE"
     gene            36889..37395
                     /locus_tag="PXF40_000444"
     CDS             36889..37395
                     /locus_tag="PXF40_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein"
                     /protein_id="HDL5801821.1"
                     /translation="MAMSNIGLDKEIAKKLADELNGLLATYQVFYTNVRGYHWNVRGV
                     NFFELHAKFEEIYDDLVTKVDEIAERILTLGHTPQNAFSQYLTKSQIQEHIGVSAAQE
                     CLRGTLNGFKTLLGQQREILALANDANDEGTASQMSDYIKEQEKLVWMFTAACAECSD
                     YAQGCSCN"
     gene            37454..38167
                     /locus_tag="PXF40_000445"
     CDS             37454..38167
                     /locus_tag="PXF40_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HDL5801822.1"
                     /translation="MAMSQGFQFKQFFIRHDRCAMKVNTDGILLGAIAHIKDCQNILD
                     LGIGSGLVALMLAQRTDDCCHITALELEPNAYQQAVENAQNSAWANRISVLQGDVMQQ
                     AFEQKFDLIVSNPPYFADSLAARTTERDLARSISHYSHLNWLAKAKPWLAENGKITLI
                     LPIAAAEKLVDQSEQIGLYCVEQWLIFTKSGKLAKRSIVSFSLNKQKREHKELIIYDL
                     DNCYTTEFKRLTQDFYLNF"
     gene            complement(38278..39282)
                     /locus_tag="PXF40_000446"
     CDS             complement(38278..39282)
                     /locus_tag="PXF40_000446"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005651072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HDL5801823.1"
                     /translation="MAFNLKNRHLLSLVNHTEREIRFLLDLARDLKRAKYAGTEQQKL
                     KGKNIALIFEKTSTRTRCAFEVAAYDQGAHVTYIDPNSSQIGHKESMKDTARVLGRMY
                     DAIQYRGFKQSVVQELADYAGVPVFNGLTDEFHPTQMLADVLTMIENCEKPLSQISYV
                     YIGDARNNMGNSLLLIGAKLGMDVRICAPKALLPEDAFVKMCEKFAAESGARMTVTED
                     IETAIKGVDFVHTDVWVSMGEPLESWTERIDLLMPYRVTPELMQATDNPKVKFMHCLP
                     AFHNSETKVGKEIAEKYPALANGIEVTEEVFESPMNVAFEQAENRMHTIKAVMVASLA
                     "
BASE COUNT        11496 a         8253 c         8012 g        11535 t
ORIGIN      
        1 gaagcagtat ttctgttata accaaatcat ctacttcatt ccaataaact aaaacccact
       61 atttcactaa gtctttcatt tgtgttattg tgccgataca tttttttgac tacaaaggat
      121 agatgatgaa actacaaaaa cttatccgag aaaatcattt agcattgctg tttcaacaag
      181 ggaattttgg gcttgagaaa gagagccaac gggttgatcg caacggcaat atcgttacta
      241 ctccccaccc tgccgtattc ggtaatcgct cttaccaccc ttatattcaa accgattttg
      301 ccgaaagtca gctagagtta atcactcccc cgaatgctaa attagaagac agttttcgtt
      361 ggctctctgc tattcacgaa gtggtattgc gttcgttgcc agaggaggaa tatatcttcc
      421 ctctcagtat gccggcaggc ttgccgccgg aagagcaaat tcaagaagca caatttgaca
      481 accctgaaga tgtgcaatat cgccaacacc tttccaaaaa ctatgggaaa tataagcaaa
      541 tggtaagcgg cgtgcattat aattttcaac tttcaacgga atttgtcgaa aaagcctttg
      601 ctttacaaac ggaatatagc gagctgaaag ccttccaaaa cgcactttat atgaagttag
      661 ctaataactt tttgcgttat caatggattt tgctctattt attggctgcc acgcctacgg
      721 tggaatcgca atatttttat gaaaaatcac cgcttgcgag agggcaactt gtccgcagct
      781 tgcgttcaag cccttatggt tatgtgaatt cggaaaaagt ggtggttaat cacgacagct
      841 tagaaagcta tgttgaaagc cttgaagcca atgttgccaa cggattatta attgccgaaa
      901 aagaattcta ttccaatgtg cgtttacgag ggggcaaaaa agcccgtgag ctattggaaa
      961 acggtgtgaa atacgccgaa ttccgtttat ttgatttaaa ccctttcgcc ccttacggca
     1021 ttgagctgaa tgatgccaaa tttatccatt atttcttact cggtatgctt tggctggagg
     1081 aaacaagcgg tcaaaaagag gtcgaaatcg gcaaacggaa actttaccaa gtcgcacttg
     1141 aagatccaag aacagaaacc gctttccgtg ccgaaggtga agccatttta aatcaacttt
     1201 tagcgatgct tgaagaatta tctgccggtc aggaaagcct agatttggtg cgggaaaaat
     1261 tagctcaatt tgctgatcca agcaaaaccc tgaacggacg tttaattgcc gcaatagagg
     1321 aagtcggcag ttataaagca ttgggggcta aattggctca aacctataag gcacaagcct
     1381 ttgagcgttt ttatgcgtta tcggcatttg ataatatgga actttccact caagccctgt
     1441 tttttgattt gatccaacaa gggattgagg tggaagtact ggacgaaaac gatcaattcc
     1501 tcgccctaaa atttggcgat catttggaat atgtgaaaaa cggcaatatg accagccgag
     1561 atcaatacat ttcaccgctg attatggaaa acaaagtggt gacgaaaaaa gtattggcaa
     1621 aagccggctt taacgtgccg aaaagcgttg aatttaccaa ccttgaacag gctgtggcac
     1681 attatccgct atttgaaggc aaagcggtgg tgattaagcc gaaatcgact aactatggtt
     1741 tagggattac catcttccaa caagcggtca aaaatcgaga agattttgca aaagcggttg
     1801 aaattgcgtt ccgtgaagac aaagaggtga tggtggaaga ctatttagtc ggtactgaat
     1861 accgcttctt tgtactgggc gatgaaaccc ttgcggtgtt actgcgtgta ccggcgaaag
     1921 gtcaaacagt tcaactgcgt gccaattcca acatcagcac cggcggcgat tcgattgata
     1981 tgaccgacca aatgcacgaa agctatagac aaattgcagt gggaattgct caggcaatgg
     2041 gggctaaagt gtgtggggtg gatttgatca ttcctgatct caccaaacct gccgagccaa
     2101 atttaagctc ttggggcgtc attgaggcaa acttcaaccc aatgatgatg atgcacattt
     2161 tcccttacca aggcaaatcc cgccgtttaa ccaaagcggt aatcaaaatg ctgtttcctg
     2221 agataggcaa ttaaattttc tctctatacc tcttttaagg agaatttact caagaattct
     2281 ccttaattta tttctaaagt tttactccaa ttaaatttca ctttgtgcaa aacactccaa
     2341 aagaagaatt tttttgtata agtaaaaacg atcgaaaata tctccgttaa caaaatgtta
     2401 taaagaaaag acatttagcc caatttatag ccaaaaaagc ttattgtctg tgatatagat
     2461 cacacttttg taattaatac attgtgtgaa ataattatca tattaaaatc tcgccccagt
     2521 aaataaacaa cttaaaaaac cgcaaggagt aacaaatgag cattgctatt atcatagcaa
     2581 cccatggtgt tgctgcagag caacttctca aaacaactga gatgttgatt ggtgaacaag
     2641 aagatgttgc ttacattgac tttgttcccg gcgaaaatgc agaaacgatt atgggcaaat
     2701 atcaagcatt ggttgaaggt ccactatcac actgtgatca agtgctgttt ttggtggata
     2761 tgtggggagg aagcccattc aacgccgcaa accgattcca agatggaaaa tcgggtatgg
     2821 atgttgttgc gggtgtgaat attcctatgt tagtgaacac ctgtatggct cgtgatgatg
     2881 tggagtcgtt ggaagaattg gtggaagtcg cattagaagc cggctcaacc gggattcgtt
     2941 cacttaatca ccaacctgaa gtggctgagg tgcaaaccgc tactcctgca caagaaactg
     3001 cagctgttca acagcctgaa attgttgatg acggacgtcg tatgaccatt gcccttgccc
     3061 gtattgatga ccgcttgatt cacggtcaag ttgcgacggt ttggacaaaa gaaagtaaag
     3121 tcaatcgcat tattgtggta aacgaaggtg tagcaaaaga tagtgtacga actactatgc
     3181 taaaaagtgt tgctcctctt ggcgtaacgg ctcacgttgt tgatgtacct aaaatgattc
     3241 gtgtctataa caaccctgaa tatgccgatg atcgtgtaat gttactcttt accaacccaa
     3301 gtgatgtctt agccttaatt gaaggcggtg taccactcaa tagcattaac gtgggcggta
     3361 tttcgcataa agaagggaaa caaatggtta gccattctgt ggcggttgat caaaatgata
     3421 ttgatgcctt caaagcaatt gatgcgaaag gcgttgaatt agaagtacgc aaagtctcaa
     3481 gcgatagccg tcagtatatg atggatttat tgaaaaaaca taacttaatc taaaggaaat
     3541 tactatggaa ctttcagcat tacaaattgt gcttttattc ctcgttgcct gtatctcagg
     3601 tatgggctca attcttgatg aatggcaaac ccaccgtccg ttaattgcct gtacgatgat
     3661 aggcttagtg cttggtgatg tgactaccgg cgttattgtt ggtggctcat tagagttatt
     3721 agctttaggt tggatgaaca tcggtgccgc tgttgcacca gatgcggcat tagcctctat
     3781 tgtctcaacc attttagtca ttgtaggtcg tcaagatatt tcaactggta tcgccatcgc
     3841 tattccgctt gcagctgccg gtcaagtatt aacctatgtt gtgcgtgcaa tcaccgtagg
     3901 tttccaacac gcagcagata aatcaattga agacggtaac ttaagccgtt tagactggtt
     3961 acatcgtggt gctttattgc ttcaagcaat gcgtattgcc attccggcat taattgtggc
     4021 attaacagca ggtacagatg cggttcaaac aatgttaaat gccattcctg aagtggttac
     4081 aaccgggctg aaaattgccg gtggcttcat cgccgtggtg ggttatgcga tggtgatcaa
     4141 tatgatgcgt gcaggtcatt taatgccgtt cttcttcgca ggctttgtaa ttgcaggctt
     4201 taccgatttc aatcttgttg cccttggggt attaggtacg gttattgcaa tggtttatat
     4261 ccatatgcac cctaaatata acaaaagcca acaggtagtg gtggcagctg caccaaaaaa
     4321 tgatttagac aaccgtttag actaagaggg catttaaaat gacaactgaa atcaaaaaag
     4381 taacaaaaag cgatttgaat gccgttgtac gtcgttcaaa cttattccaa ggttcgtgga
     4441 actttgagcg tatgcaggct cttggttttg cgtatgcgat ggtaccggtt atcaaacgtt
     4501 tatatccgga tccaaatggc ccgggtcgca aagaagcaat taaacgccat tctgagttct
     4561 ttaacaccca gccattcgtc ggtgcaccga ttttaggggt aaccattgct atggaagaag
     4621 aacgtgccaa cggtaaagaa atcgacaatg ccgcaattaa cggtattaaa gttggtttaa
     4681 tgggaccatt agccggtgtg ggtgacccaa ttttctgggg aactgttcgc cctgtatttg
     4741 ccgcattagg agcaggctta gccttaaaag gtgagctttt aggcccaatc ctgtttttcg
     4801 ccttatttaa catagtgcgt ttagccgcac gctattatgg cgtagtgtat ggctataaaa
     4861 aagggttaga tgttgtacaa gatatgagcg gcggtttatt gcaaaaatta accgaaggtg
     4921 cttcaatctt aggtctgttt attatggggg cattggtaca aaaatggacg agcattaacg
     4981 ttccgcttgt gctttcaacc attcaaaaac aagacggtac catcgaagtt accacagtgc
     5041 aaagcattct cgacagctta atgccgggcc tactcccatt attattaacc tttgcttgta
     5101 tgtggttact tcgtaatcga gtaaatgcta tctggattat cctcggtttc tttgttatcg
     5161 gtatcctcgg cgctgcaacc ggtgcattag cttaattgca aaattttctg tgaaaacgac
     5221 cgcttgaact tgaacattca agcggttttt tatacgcttt agcccaaata aattcacttg
     5281 cttaattatg accaatacca tccttattct ctttatttta cttggcttag tattcgccat
     5341 ttatgaccaa gtttttatgc acaaactcaa aggcacaacc ttactggaaa tccgtttaaa
     5401 aaagcaaaaa acaattgata cttggttatt gattggttta atcgtcttgt caattagcta
     5461 tggcgtacaa aatcaaatcc agccttttac actttacctg ctggcgactt gcattattct
     5521 gtcggtctat ctcgcctttt tccgttcccc tcgcttgttg ttaaaacagc acggtttttt
     5581 ctttgcgaat gtctttttta attacgacaa gatttatcaa gtcaatattg cagaaggaaa
     5641 agcagacgaa aaaattttgg taattgattt acatagcgga agaaggctgc ttgcctatgt
     5701 tgaaaatgcg gaagatcttc aaccggtagt ggattttttt ggcggttata aaaaggaaag
     5761 tgagcagaaa tagtttgcga acaaaacaca agcggtcatt tttccctgaa attttgcaaa
     5821 aaactgagga aaaatgaccg cttgtaaaat cggttaaatt aggctttagc agccgctgcc
     5881 gctttaacga tcaccgcaaa agcaggcgct ttaagtgaaa caccgcctac taatgcaccg
     5941 tcaatatccg gttgagtgaa taactctgct gcattggcat cgtttacaga gccaccgtat
     6001 tgaatgatca cttggtcagc cactgcttgc gatttagctg caatatggtc acgaataaat
     6061 ttatgcactg cttgtgcttg tgccggagtc gctgatttgc cggtaccgat tgcccaaatt
     6121 ggttcgtaag caataactgc accgttgaat gcttccacac cgtgcgcgtt gatgaccgca
     6181 tcaatttgtc ttgcacacac ttcttcagtt ttacctgctt cattttcggc ttcagattca
     6241 ccgatacata atacaggcac taagccggca tcttttaata ctttgaattt ttgagcaata
     6301 aattcatcgc tttctttgtg gtaagtacgg cgttctgaat gcccgataat aatatatttt
     6361 gccccaaact cttttaacat ttcaggtgaa atatcaccgg tgaatgcccc ttttacgttc
     6421 acatcaacgt tttgtgaacc aagtgcgatt aagcctttat cactgcaacc acagccacaa
     6481 ccggcaagtg atgcttcagc gtgtgccaaa tacatcaccg gtggagcgat tgctacatca
     6541 cagccttcaa cgccatgtaa ttctgctttt aaatctgcaa ttaaggtttt agtaaacgct
     6601 ttatcaccgt ttaatttcca gttacccatt acaagtggac gacgtgccat tttgtttctc
     6661 ctatatgaag ttgaacttaa atataaacgt tgcaaactat accaaatttt aatgtcgttt
     6721 tgttgttttt attttgcttt ttctgatcta gatcgaaagg tttaacgtat aatgccgaaa
     6781 tcttattttt tatgttattc gagaagtgaa tgaaactgaa ttatttatac tctcctcctc
     6841 aagctgttgg gcgactaaaa gccgaatatg cagactttat tgtgcgtgaa gaactgggct
     6901 acgaactagc cggcgaaggg gaatttgtgg cggttaaaat ccgcaaaacc aacgccagca
     6961 cgctgtttgt gggggaaaag ttagccaaat ttgtcggtat ttccgagcgt gaaatgagtt
     7021 atgcaggctt aaaggaccgc cacaaccgca aaattcgtgt tggttcgctc gccggcaatc
     7081 attttgaatt attgctacgt gatgtagcag aaagcgaaga gttgatttac cgtttgcaac
     7141 agttgcaagc ggtcggattt cccaattatt ttaccgaaca acgtttcggg cgagacggac
     7201 ataacctgac tcaagccttg cgttgggcaa acggggaaat tagcgtgaaa gatcgcaaaa
     7261 aacgcagttt ctacctttcc gctgcccgct cggaagtgtt taatttagtg gtttcacagc
     7321 ggattaatga ctgcttaacc caaaaaatct tggagaatga ttacgttcaa cttgccggct
     7381 ctaacagctt tttctgcgtg aaatcggacg aaattgctga aactcaagcc cgtttagcac
     7441 agcaagatct acttctcacc gctccgctga taggcgaaag atcgcttgaa ttagaatgca
     7501 atcctgctga aaaagccatc atagagcaac acgctcaatt ggttgcctta atgcaaaaag
     7561 agcgtatggc agccgctcgg cgagcaatgc tttgtaagcc acaaaatctg gaatggcaat
     7621 ttgaacaaga agggctacgg ttaaaattct ttttagattc aggcagttat gccactgcac
     7681 tggtgcgaga gttaattctg cttaccgaag agagcgaagc ttagtccata acacataaca
     7741 agcggtaaga ttttaatcat tttttgcaat ttgcaaaact ttaacaaaat cttaccgctt
     7801 tttgcacttt tagactaaaa aaactgtcga aaaattgtta gaattgcgat ctttgtattt
     7861 agagtctatc aagatgtaag atctaaagga aattatgcga attttaatta gtaatgacga
     7921 tggttttcac gctgtcggca ttcaaacttt agccaaagcc ttgcgagatg caggccatat
     7981 cgtcaccatt attgcaccgg atcgtaaccg cagtgcagct tcaagctgcc taaccttagt
     8041 agatccactt cgggtgcatc gttttgatga atataattat gcggtgatcg ccggcacacc
     8101 tgccgattgc gtgcatttag ccttaaacgg cttgtttgac ggcaaatttg cagaaaaatt
     8161 tgatttggtg gtctccggca ttaatcacgg ggcaaattta ggcgatgatg tggtttactc
     8221 cggtacggta gcggcagcat tggaaggccg ccacttgcca ttaccaagta ttgcagtatc
     8281 actggttggg cgtaaacact cttcgttttt agacggtgaa aatcattttg gaacggcagc
     8341 acaggtagtg ttagatttat tggaaaaaat ggaaacgcaa cgttttccat caaaccacgt
     8401 tctcaatgtt aatgtgccga atttacctta ttcagagcta aaaggcacaa tgatcacccg
     8461 cttaggtgaa cgttcacccg ctgcggaaat tgtgaagcaa aaagatcctc gtaatgctga
     8521 tgtctattgg attggtgtaa caggtgaacc actggatgaa agttttggta ctgattttta
     8581 tgcattaaac cgagattgcg tttctatcac accaattcaa gtggatatga ccgctcataa
     8641 aacgatagca accttaaaag gcatttttaa tgaaactgtt tgaaacaatt tatgacaaaa
     8701 caatgcagtg gtctaagcac cgcttcgctg ccttttggtt gagttttgtc agttttatcg
     8761 aggcgatctt tttcccgatt ccgccggatg tgatgttgat tccgatgtcg atggcaaaac
     8821 cgcaaaatgc gtttaaatat gcagtttaca ctacccttgc ttcggttgcc ggtggtgtta
     8881 ttggttattt tattggctta tatgctaccg attgggtgca aggcgtcatc gcaaattggg
     8941 gaatgcaagc aaactttgat aaagcaaaat tgtggtttga aacttggggt gtcgcggtag
     9001 tatttttagc cggtttttcg ccgattccct ataaggtatt taccatctgt gccggtgtaa
     9061 tgcagatggc gttcttcccg tttgtgatta ctgctgcgat ttctcgcttt gcccgtttta
     9121 ttttggtagc aaaactctct gcttggggtg gcaaaaaata tgaacaaaaa attcgccgct
     9181 caattgaatt aattggttgg ggaacaatcg ttttagccgt tgttgcctat ataatttata
     9241 cattaatgaa ataaatttta aggatataaa aatgaaaaaa tcactttttg ttttatctct
     9301 gatttctttt gctttagtgg gttgttcaag caattcgggt gaatccactt ctgcggtaga
     9361 aacaacagaa gcaaatgcaa cttggcaatc agcagatagc attcaaactg caccaatgcc
     9421 tgcctcgatg aatcaaccta ttgccactca gccaacctat cagcagccga cttactctgc
     9481 accacaacca atttcggcag caccagcacc aatgcctgtt tcaagtggta gtgatagctc
     9541 tcaagttgaa acagtaggga actgccaagt ggtgcgtgat gcgaataatg ctcctatcta
     9601 ttcacaaatt accaaaggct gctacacaga aagtcactat acggtaggta aaagtgatac
     9661 gctttattta atcggttatc taaccggcac caatgccaat caaattgcgc agctaaatgg
     9721 tttaaatacc ggctctccac tgaaagtcgg gcaagtctta cgtgttcgtt aataggcaga
     9781 gaaaatgaac agaacccttt tagcatttgc aatttcttgt gcatttttga ccgcttgtag
     9841 ctcgcctact cagccacaag ttgaagatcc aaatatgtta cctgcaggca cattacaacc
     9901 gattgaaggc tcaggcgcaa gccaagacag ttacagttgg ccgtctgata ttcaatcaac
     9961 gtcaatgcct gacagtatga aataatttta ggacaatcat ttaatgaaaa aacaatttat
    10021 tcttctccct ttagtctctg ctgttttggc agcctgttct tcaaacaatc cagcaccggt
    10081 ggtgaatgct tccggtaata acgaattaag cccgggcgtg atgcagcctg ttgatgtgag
    10141 tgcaggtgca attaattcaa gcggtggctg gcagtctgat attcaatctg caccaatgcc
    10201 aagctcgatg aataccactc cggtgcaaac aatgccccag ccggtttcag tgccacaacc
    10261 tgtggcgact gtaccgcagc caattaccaa tccggtgatt accgaacaac caccacagcc
    10321 gacaaccacg accaaaatcg tgaaaaaaac gaaaacggtc gagaaaaaag tggatcaaaa
    10381 ttttgagatc ccgcgtgatg ccaacaatgc cccaatgtac aaccaaattc aaaaagggtt
    10441 ctacgatggc tctacctata ccgtacgcaa aggcgacaca atgtttttga ttgcctatat
    10501 tgtgggtaaa gatgtaaaag aaatcgccgc tcttaataat atgagcgaac cttaccaatt
    10561 aagcgtaggg caaaaactca aaaccggcaa atctgcaacg gaaactatta ccgtggaaga
    10621 aaaagtcacc gtaccggttg aaccacaaat tacctaccaa caaggtgcaa acggcacaac
    10681 ctatgcttct ggcggtaata ttactgggcc ggtaaaagca ggcacagcca acgctgatgt
    10741 cacgccggtt aataacggta ttaaagcaac aactgcaact gctccggcag taactgcttc
    10801 tgtcggtaca gtaaatgcaa cagaggaccg taccgcctcc accattcgtg ctatagatgg
    10861 cacagcaagt ggtgccgtac aaagtagtaa tactgtttct gcaccagctt catcaattaa
    10921 atggcaatgg ccaaccagcg ggcgtgtaat ttcaggcttc tcctcagcag aaggaggtaa
    10981 taaaggcatt gatattgccg gcaataaagg acaagatgta cgtgctgccg ccgcaggtaa
    11041 agtggtatat gccggtaatg ccttgcaggg ttacggtaac ttaatcatca tcaaacatac
    11101 cgatgatttc ttaagtgctt atgcacacaa caatactatt gaagttgatg agcaagaaac
    11161 ggtgaaagcc ggtcagaaaa tcgcgacttt aggtagtaca ggaaccaata cgaataaatt
    11221 acattttgaa attcgttaca aaggaaaatc tgtcgatccg gctcgttatt taccaagaaa
    11281 ataagagtaa ctttttagca taatccgacc gcttgtgtac tacaagcggt caatttttag
    11341 gaaaattatg caaatgaaaa aatatatcgc acacatgata agttcgttac tgctgatagc
    11401 ttgttcggac taccgagcaa caccaactag cccaagcgat gcttacactt gctctccttc
    11461 ttttcgctac tctttcttaa aaaaaacgtg cataccttta ttcagtatag ccgacattca
    11521 attattggat ccaaccgagc cttcacatcg catttatatt ttgttatctg aagatcgatt
    11581 tcaagccgaa gtcttctcaa cgaagctctc tgaatcttct atgttattgg aggcggttaa
    11641 aggaggctat atttcaaaag acggaaaagt tcgtttactc aaaaaagctg aaggttggaa
    11701 aatttactat gagtgagact aaaatacgtt gtgattggtg taaaagcagt gaaatttata
    11761 tgaaatatca cgacgaagaa tggggaaaac cggagtttga cagcctcaaa ctgtttgaga
    11821 aaatctgcct tgaagggcaa caagccggac tttcttggat tacggtgttg aaaaaacggg
    11881 aagcctaccg ccaagcattc catcagttta atcctgaaaa aattgccaaa atgggtgaag
    11941 aagaaattga tttgttaatg caaaacacta gcttaatcca ccaccgagca aagttagaag
    12001 ccattataaa aaatgcgaaa gcttatatca caatgcagca aaatggcgaa gacttcagtc
    12061 ggtttatttg gtcttttgtg aattatcagc cgcaaattaa tgatgtacca acacttgaag
    12121 ctgttcctgc tcatacagaa acctcaaaag caatgtcaaa agcgttgaaa aaacgtgggt
    12181 ttgtgtttgt aggcgagact acttgctatg cttttatgca gtcaatgggg ctggttaatg
    12241 accatttgaa taattgcgtg ttcaaacata aataaacaca aaaaattagg cgaccatttg
    12301 gtcgcctaac attaattcag attattgatt gttttgaacg taatcaattg ctgattgaac
    12361 tgtagtaatt ttttcagctt cttcatctgg aatttcgata tcgaattctt cttctaaagc
    12421 cattactaat tcaacagtgt ctaaagaatc tgcacctaaa tcttcaatga atgaagcttc
    12481 tggttttaca tcttctgctt tcgcgccaag ttgatcaaca atgatttttt ttacgcgttc
    12541 ttcaatgctc attttgtttt tcctatagtg aatatcgcat aagtgcgaga gttaaatagt
    12601 gtaatcgaaa taagtttaaa tacaaccttt tataaaaagg tcaaaccaga ctattcctat
    12661 acaccagaat atatctgttt ttccattcta tcattatgtt tgtgtttaat ctatagagat
    12721 aaatcaaatt tcatttgatt accctacttt ccgtaattca tctcgcattt gtgcaatcac
    12781 tgcttgataa tctggctggt caaaaatcgc agaacctgcc acaaacatat ctgctcctgc
    12841 ggctgcaatg tcggcaatgt tatttatttt cacaccacca tcaacctcta agcgaatgtt
    12901 ataaccgctc tcatcaatac gacgacggac ttctttcaat ttatctaagg tggacggaat
    12961 aaatgattgt ccgccaaagc ccggattcac agacatcaat aaaaccacgt caactttatc
    13021 catcacataa tctaaatagc tcaatggcgt tgccgggtta aacaccaagc ctgatttaca
    13081 acctaaatca cggataagct gtaaatttcg atctatatgt tccgttgctt cagggtggaa
    13141 tgtaatataa tccgctccgg ctttggcaaa atccggaatc aaacgctcaa ccggttttac
    13201 cattaaatgc acatcaatcg ggcattgaat gccgtaatca cgtaaggctt tgcagatcgc
    13261 cggcccgaag gtcaaattcg gcacgtagtg gttgtccatt acatcaaagt gaattaagtc
    13321 tgcaccggct tttaacacct ctgccacatc atcacccaag cgagctaaat cggcagataa
    13381 aatagacggt gcaattaaat aaggattctt actcatattt cctcactatc aaaaaataaa
    13441 tctacgttag attaccataa ttttaacagc gaaaagagtc tctcttccta aaaatccgtt
    13501 tttttacaaa acaccataaa aaagttatgg aattgtattt aaagttcgta tattatgtat
    13561 cccatatttt aattatggtt aatgacctta tctaaattct ggagaaaata tgaaaaaagg
    13621 gattcatcct gaaaattatc gtgaagtgtt gttctatgat gcctcagtgc aacaaggctg
    13681 ggttatccgt tcttgtgcgg caaccaacaa aacaatggta tgggaagatg gcaaagaata
    13741 cccactttac accttagata cctcatcggc gtctcaccct gtttacacag gtaaacgccg
    13801 tgaagtgaat acagaaggtc gtgcaagtca atttaaagat agatttaaag gctttgcttc
    13861 aacgctttca aatcaaaaat agaggataaa atgaaaatct taaactcact taaaaccgca
    13921 aaatcacgcc acccggattg ccaaattgtc agacgcaaag gcaaacttta tgtgatttgc
    13981 aaaaccaacc cgagatttaa agctcgtcag cgttaaaaac cagcacctta ataagctaat
    14041 ttattaaggt gttttttatt tcatcttctc aatattacct attttaacca catcaacgat
    14101 tttattattt cttattccat ttagttattt gcaagcggtc aattttcccc ttaaatttgc
    14161 aaaaaattta ttttaccaat taaaaggaaa tgattatgtt gaaaaaatta tcaattgctg
    14221 cattagctct taccctttct gtttctgcat ttgctaaaga gagcctactt gagcgtataa
    14281 acaacaaagg gactattact gtgggtacgg aaggaactta tgccccttac acctatcacg
    14341 atgcgagcgg taaattaacc ggttacgatg tagaagtaac ccgtgcggtg gctgaaaaat
    14401 tagacgtaaa agtggaattt aaagagacac aatgggacgc tatgttagcc ggtttaaaag
    14461 gtgagcgttt tgacttagtg gcaaaccaag tggctttaac cagcccggaa cgtcgagcga
    14521 catttgataa atccgaatct tacagctggg acggtgccgc cttattagtg cgtgaagatg
    14581 aaactaaaat caaaacccct gctgatgtaa aaggcgtgaa aactgcccaa accttgagct
    14641 caaactatgg cgagattgcc cgtgaaaacg gtgcagacat cgtgccaatt gacggtatgg
    14701 ctcaaggctt actgttaatt caacaaaaac gcgccgatgc aactttcaat agccacttat
    14761 cgctattaga ttacttgaaa aagaacccga attccggctt aaaaattgtg tgggaaaaag
    14821 aagaaaaagt gggtgcaggc ttaattgcga ataaaggcaa tgacgaagca ttagcgaaaa
    14881 tcagcaaagc aatcgtagaa ttacgtgaag acggcacgtt aaaaaaattg ggcgagcagt
    14941 tcttcggtaa agatattagt gtacaataat ccatattgga ttaggcttgg ggcgaattcg
    15001 ccccttttat ttttaaatct ccctcaaaac gggagatttt aggtttttca gatgttaaac
    15061 gatctacttc tctcaatccc ctttatgacc caagctcggg tcgatttagt gctaagcggt
    15121 ttttggccga tggtacaagc ggcattttta gtctctattc cgctggcaat cgcctcattt
    15181 attatcggta tgttaattgc cgttgcagtt gcattagtgc gaattagccc tgcaacaggc
    15241 ttttttcacc gcttgctact gtggctggta aaaggttata tctcgattat tcgcggcacg
    15301 ccgatgttgg ttcagatctg tattgtgttt tatggtttgc ctgcaatcgg catttttatc
    15361 gatccgattc cggcggcaat tatcgggttt tcactcaata tcggggctta tggctcggaa
    15421 acgatccgtg ctgcgatctc ctccgtgcca aaaggacaat gggaagccgg ttatactatc
    15481 ggtatgactt atatgcaaac ttttcgccgt atcattgccc cgcaagcgtt tcgagttgct
    15541 gttccgccac ttagcaacac ctttatcggt ctgtttaaag atacctctct tgcctccgtt
    15601 gttaccgtaa ccgaaatgtt ccgggttgct caacaggtag caaatatgtc ttatgacttc
    15661 ctacctgttt atattgaagc cggtttgatt tattggtgct tctgctgggt gctattttta
    15721 attcaggcga gattggaagt ccgctttaac cgatttgtgg cgaaataagg aggaattgtg
    15781 cttaaaattc gcaatattca taaaaccttt ggcaacaacg ctattctacg cggcattgat
    15841 ttagatattc aaaaagggca agtggtagta attttaggcc cttccggttc aggcaaaacc
    15901 acctttcttc gttgcttaaa tgcactggaa atgcccgagc aaggcacatt ggaatttagt
    15961 ggtaatgctc cgctgaaaat tgattttgcc gtaaaacaga gcaaaaaaga gattttagcg
    16021 ctacgccgca aatccggtat ggtgttccaa aactacaacc tgttcccgca taaaaccgca
    16081 ttggaaaatg tgatggaagg accggtattt gtgcaacaac aagcggtcga aattgctcaa
    16141 aaaaatgcaa aagccctgtt agaaaaagtc ggactggcgg ataaagcaga actctacccg
    16201 tttcaactgt caggcgggca acagcaacgg gttggcattg cacgagcatt agcaattcag
    16261 ccggagctga tgttatttga tgaaccaact tcggcacttg atcctgagtt agtgcaagac
    16321 gtgctaaata cgatgaaaga actggcaaat gaaggctgga caatggtcgt ggttactcac
    16381 gaaatcaaat ttgcccttga tgttgccgat gtagtggtgg taatggacgg cggtgaaatc
    16441 gttgaacaag gctcgccaca gcaactgttt aaccacccac aacacgaacg aactaaacgt
    16501 tttttaaatc aaatcagagc ggataaataa gaaacgatag cgctagcgtc cacgctagtg
    16561 ctatctaata aatggtacaa gcggttaatt atgtataaat tgttatactg ttttggcacg
    16621 agcgtggacg ctcgcgccat cgtacagtaa aatcagctaa caaggttccc cataaaggat
    16681 aaataagaca aggctcctta atcttttaga ttaaggagct tatttttaga ttttagaaat
    16741 ccgatttaag ccgcagccca tagtccacca aaaatttggt agaacaagct atttagtagc
    16801 aataagccga aacctagcac cattaccgag aaatctaaca ttcccgttct tggcaggagc
    16861 ttgcggataa aacctaacac cggttcggta atttgtgcta ccgtgtagtc taatgggtgg
    16921 ttgccttgag tgacccagct cattaatgca cgaatcaagg tggtgaaaaa tagaatttgt
    16981 ccgaaggttt tgaccacact taataagccg attaatactg ctctgggtaa atctacgcca
    17041 aacagaataa actgtaacgt taccaaagcg gcggcaatta atagtgccgg aaagcaaata
    17101 tttttaacgg ttggaatcag cttgccaacc ggtgaaacca tcggttcggt aattttaagt
    17161 aaggtttgtg aaatcggtaa acgaggatca acccgacaaa attgcagcca agttcttagc
    17221 accagcacaa aacttaaaaa gccaacaata agcgaaataa caggagctaa aaattccatc
    17281 tctttttctc tttctataca aaacaagcgg tcgtttttta gaaaaaattt gcaaattttc
    17341 agtaaaatct gaccgcttgt atcttattaa attaactagg caaattaagc ttgtgctggg
    17401 tagtcccacc aaatatcaaa taattcgctc acttgaacct cttttaagcc gttagtttct
    17461 aaccaagttt tcactaattg gcggtgagat tcatcacatt tgcctaattt ttctaagcag
    17521 actaaacctt cccagtttaa gtagccgttc gcttcaaggg ctaaaccgtt tggtcgaatc
    17581 acttcatcga taaaacgatc tacggtttca tcaatttggt caatgcctgt gccttcagca
    17641 aaggtgaatt taattaagaa acctaattct tggtattcac ctaagtgcat ttttttacgt
    17701 tggcgtgcgt tacgttgaat agccattttt tctctcctct atgaataaat catttctttg
    17761 taaaatataa atcccacacc ccgtgtccta aacgatgccc tcgctcttca aatttggtta
    17821 gcgggcggaa attcggacgt ggaataaaat cattagttgc tgatgtattt tgcaactcgc
    17881 tctcaaattg gcgtaatact tcaagcatat gttctgcgta attttcccag tcggtggcaa
    17941 aatgaataaa gccgttaggg cttaattttc tgatcacacg gctgataaat tcaggctgca
    18001 caatacggcg tttgtggtgt tttgcttttt gccaagggtc tgggaagtaa agctgtaagc
    18061 cacctaatgt accgtcagca atgctgtctc gcaaaatttc ggtggcatcg tggcaaatta
    18121 ctcttaaatt cttcacgcct ttttctaacg cataagcgat acaagccccc accccgggcg
    18181 tgtgcacctc aatgccgata tagttgcgat tcgggttttg ctctgccatt tccaccagcg
    18241 attttcccat tccgaagccg atttctaaca ctaccgggtt gttattgccg aaaatctgct
    18301 caaaattaaa gggcattggc tggtaatcta agcctaaatt tgcccagttg ttgttcatca
    18361 tatcacgttg ataatcgctc aaacgaccgg tacgcaatac aaaactccgc acttttcgta
    18421 aataacgccc atcttcggta aactcggctt gctcaacggt tttacgtttt ttatctgcaa
    18481 aagtctgttt ttctgacatt ttcttgcctt aaaacttcac taataccgaa ccccaagtcc
    18541 agccaccgcc gaatgcttca aggagtagta attgcccacg ttgaattcgc ccgtcacgca
    18601 ccgcttcatc taatgccacc ggcactgttg ctccactggt attggcatat ttatcaaggg
    18661 taaccaccac ttgatccatt tccatctcta attttttcgc cgttgcggtg ataatgcgta
    18721 aattcgcttg gtgcggaatc agccaatcta aatcggattt ttgtagatta ttcgcttcta
    18781 aggtttcttc taccacgctt gaaagttggt ttactgcaat tttaaaggtg gcattgccct
    18841 gcatttcaat aaagccggaa cgctcttcgc cacgcttttg gcttcttaag gttaagttat
    18901 tttctaaatc cggtgaggcg tgcaagtggg ttgaaataat acccagctct tcactcgcct
    18961 ctaaaatcac cgccccagct ccgtcaccaa ataatactac tgtgctgcgg tcggtttcgt
    19021 ctaacattct ggaattgatg tctgaaccaa taaccaatgc ctttttcact tgcccgttac
    19081 gcacgaattg atcggcaaca gttaaagcat acacaaatcc tgtacaagcc gctgccacat
    19141 caaaagcaat cgcgtcttca atctgaagca agccttgaat ttggcaagct gcacttgggt
    19201 aagcgtggga gttggtagtt gttcccacca caattaaatc aatgtcattt gcctcaattc
    19261 ctgccatttc cagtgcttgt tgagcggctt ttgcccccat tgttgccact gtttcgtcag
    19321 gctcggcaat acggcgttca cgaatgccgg aacgggttac gatccattca tcagaggtat
    19381 cgaccatttt ttctaaatca gcattggtac gcacctttgt cggtaaatag cttcccgttg
    19441 ctaaaattct actattcata tttttattat tctcaatcaa ttaaatgata atccgttatt
    19501 atagcttgaa aaccaacaaa tatataggct ttacaagcgg tcatttttag caaaaaagtt
    19561 gcattcacga acgattttgc actagaacca ccgcttgcta gtatttattt cgcttgagcc
    19621 tcttcgtata gccacttcgc tactcgcttg gcgaaataag ttagaatacc gtctgctcct
    19681 gcccgtttaa agcagagtaa tccctccata atgcactcac gctctttcag ccagccgttt
    19741 tggattgccg ccatatgcat cgcgtattcg cccgaaactt ggtaggcgaa ggttggcacg
    19801 ccaaaattct ctttcacacg ccacaccata tccaaataag gcatacccgg tttcaccatc
    19861 accatatctg ccccttcttg aatatccatc gccacttcgt gcaagccttc gttgccgtta
    19921 gccggatcga cttggtaagt gtatttatta ccgcctttta agttgccggc agaacctact
    19981 gcatcacgga acggtccgta ataattagac gcatatttag ccgaatacgc cataatttgc
    20041 gtattgataa aaccgttttg ctcaagggct tcacgaattt tgccgattcg accgtccatc
    20101 atatcgctcg gggcaacaat atccgccccc gcttctgcgt gcgataacgc ctgttttacc
    20161 aatacttcag tagtcacatc attcagtaca tagcctgttt catcaataat gccgtcttgt
    20221 ccgtgcgtgg taaacgggtc taacgccaca tcagtaatca cgcctaattc cggaaattga
    20281 gcttttaaag ctcgcacggc acgctgtgcc aacccttgcg ggttataggc ctcttctgcc
    20341 atcagtgatt ttttcacatc acccaccaca gggaaaagag ccaccgcagg cacgccatat
    20401 ttaaccagtt ctgcggcttc aactaaaagc tggtcgatag ttaaacgctc tacacccggc
    20461 atagaaggca cttgtactcg ctgattttcc ccttcgatga caaaaacagg gtaaatcaaa
    20521 tcattaacgg taagttgatt ttctgccact aagcggcggc tgaaatcgtg cttgcgtaaa
    20581 cgacgcatac ggcgtaaagg atattgggat tgaattactt gcatttttaa tttcctaatt
    20641 cttaaaatac ctattcttga aataagaaag gcatagcaaa caggtgctat gccttttcaa
    20701 aatattactg tgcaacctgc tctgatggtt catcatcatc tttggggcga taaaaccgag
    20761 caaatagcac accaacttca aacaataaac acattggaat tgccaataat gtttgcgaga
    20821 aaatatctgg tggggtgagc aacataccaa ttacaaatgc tgccacaata atataagggc
    20881 gttttgcctt taaatcttcg ggtgtggtta cgcctgccca acataacaag ataatcgcaa
    20941 ccggcacttc aaagcagatc ccgaatgcca taaaaatggt taaaacgaaa tcaagatagc
    21001 tactaatatc cgttgccatt gttacccctt ccggagcggt agaggttaaa aagccaaata
    21061 caagcggaaa tacaacataa taggcaaaag cgacaccaca ataaaacagc aatgtgctag
    21121 ataccaataa tgggtaaacc aaacgctttt cctgcttgta taaagcaggg gcgacaaacg
    21181 cccaaatttg gtacaaaata aaaggaactg ataaaaacac cgaaaccaca atggttaatt
    21241 taattggggt aaaaaacgga gtggctacat tggttgcaat cattgttgca ccgtctggta
    21301 aattgtccgt taaaggtgtt gccaataagg tgtaaatatc attggcccag taaaccaatc
    21361 cgcaaaacac caagagcaca cagataaaac tacgcagtaa tcggtttctc agctcaatta
    21421 aatgtgtaat cagaggttga gactcatcaa cttgcgacat tatttgcctc cgatttctgc
    21481 gctgattctg atgattgagg cgtagctaaa tcatcatctg gcggatagta agattccaac
    21541 gttaaaagcg attcgtccat ttctgcttgt tcagccagct catcagccga aagtggcttt
    21601 tctgtccgcg taacattaag ttgctcagat aaactatcca cttcaagcgg tttattttgc
    21661 gcattttttt gcaattcttg cgcctctaac acctggcttt cttgctcgat tttttgctga
    21721 atttctgcga cttgctcatc ggttaattta ggaattgtgc tgctttccgc agccgttttt
    21781 tccaactcat tttttgcaga attaagcgaa tcttgcaact gggtggctga cattttcaga
    21841 tcttccaccg ttttatttaa ttctggcgaa agggagctta aattcaactc ttctgccttt
    21901 ttaatgctct cttttaattc ttgcagtttc agctcttgag ccagttcatt ttgtacgttt
    21961 gcggctaaac ctcgaattgt actcacccag cccattacgg tacgaatcgc aatcggcata
    22021 cgtttcgggc ctagcaccac caagcccaca atcataatca gtactaattc agaaaaacct
    22081 atatcaaaca cggattaagc ctgctctttc tcttttgctt tctgctctgc tgaaattgca
    22141 tcttttgctt ccactttttc aaattcagca tcttttttct catctgccat tgcttttttg
    22201 aagcctttta cagattcgcc caaatccgaa cctaaagtac gtaatttctt cgtaccgaaa
    22261 agtaatacga tgattgcaac cacaatcaga agctgccaaa tactaatacc gcccataaaa
    22321 actcctttca tttaataggg aatagataaa ataaaacgct gtttattata tgttactttg
    22381 acatataaaa aagtaatttt gcaaaaaatt tgtcaaaaac aaccgcttat ttgcgttgac
    22441 tcaaaatcaa taccagtgga aataaagtta ataacggcac acttagccat atcggcaaag
    22501 attcaaattt ccaaaatgcg ccacagatca caatcgctga aattgacagc acaagaaaac
    22561 ggctatttgc gtttgaattc tgtgctttta aactttcgtt aatttccgct aaacggaaat
    22621 taatttgctt ttgctcttgt aaggctttaa acaatgcctc cggaaactcc gcaaaatgct
    22681 cccgatattg cggtaaacgt tgcttaatgt ctcgaaccat cgctttcaca cctacctgct
    22741 cattcagcca gttttgtaaa aacggttttg cggtttgcca taaatccaac tgtggataaa
    22801 cctgcctgcc caaaccttca atataaagaa gtgttttttg caacaacacc aactgcggct
    22861 gcacttccat attaaattct cttgccacat taaacaggtt gagcaaaacg tgtccgaatg
    22921 aaatttccga taacggctta gcaaaaatcg gctcacatac ctcacgaaag gcttgctcaa
    22981 atttatcaat atcggtatcc ggcggcgtcc agcccgattc cacgtgcatt aaggcaacac
    23041 ggcggtaatc tcggttgaaa aatgcgacaa aactttcggc taaatagcgt ttgtcattgt
    23101 ggttcaacgt gccgacaatc ccgcagtcaa tgccgatata ttgcggattt tccgggtgtt
    23161 ctctgttcac aaaaatattg ccggcgtgca tatcggcgtg gaaaaaactg tcacggaata
    23221 cttgggtaaa aaatacctgc acaccacgct ctgccagcaa tttcatatcg gtgctgttcg
    23281 cttccaactc ggcaatgtta gacactggaa tgccataaat ccgctccatc gcaatcaagt
    23341 ttttatggca aaaatcttga tacatttcag gcacatacag catttcgcta ttttcaaaat
    23401 tcgcccgaag ccgaatggca ttgtgcattt ctttgcgtaa atccagctcg tctaaaatag
    23461 ttttttcgta ctctcgcacc acttcaaccg cccgtagccg tttgccgtca ttcgataatt
    23521 tcgggataaa gtgagcaatt tcatacatca actctaaatc cgccttaatc accggctcaa
    23581 tgcccgggcg aatcactttt aacaccacat ctttgcctgc aagcggttga ttttggttaa
    23641 attttgccgt gtgaacctgt gcaatcgaag cagaagctaa ggcagtttca tcaaagtttt
    23701 caaaccaagt ttcaagcttt ccgcccaaag cctgctcgat aatttgacga gcgattttgc
    23761 cgtcaaacgg ttcaacatta tcttgtagca aggcgagctg gtcggcaagc tccggtgcaa
    23821 acagatcacg tctggtagct aacatttgcc cgagcttgat ccaaaccggt ccaagctctt
    23881 gcaaagccaa acgtaaacgt acaccgtaag gtttgtctga atgttgattc ttcacccaaa
    23941 acaaagcctt acgccctagc tttattttgc gggtaattgg cagattcgga atggcttcat
    24001 caataccata gcgaagaaaa gtgcggataa tatggtaaaa gcggttgaga tttttgatgt
    24061 tcattgaaat atatatttaa tggtaattag gaagatttta gcaaaattct gtaaaaattt
    24121 aaccgcttgt tgggctacta tgggtatttc tgctcaaaat tctcaatttc tttctgtact
    24181 tccgcaataa gtgtttgttc agaggggagg taaagttggt attggctggc aaaaatttta
    24241 ttctgatttt ccggtagcga aaattttacc accgcatcat ttttatcggc acaaagcaag
    24301 acaccaatag tggcattttc gtgcggcagt ttttcaactc ggtcaaaata attgacgtac
    24361 atctgtaatt gccccaaatc ttgatgggtg agcttgtggg ttttaatttc aaaaatcaca
    24421 aaacattgaa gtaaacggtt gtaacaaacc aaatcgacaa aaaaatcatc accgtctagg
    24481 tgcaaacgct tttggcgtgc gataaacgag aaaccgttac ccaattctag tagaaaatcc
    24541 tgcaaatgcg taatgatggc ttgctctaaa tccttttcgt aataagcact ttcccgtttt
    24601 agtccgagaa attccaatac catcgggtct ttaatgagct gtttcggatc aaccggctgc
    24661 tgctcatttc tggcaacagc aagcacactt tccttatcat tactgagcaa taatcgctcg
    24721 tatagactac tattaatttg ccgttccagc tggcgtgaac tccaattatt cttacaactt
    24781 tcagccaaat aaaattccct tttgtcagaa tcggagattt gaattagacg acgatattgt
    24841 gtccaattca attgcgaccg cagtgcggtc gcaattggaa acgcacgata aaactggcga
    24901 taacgctcta attgacggct acaaaaacca cttccaaatt ctggctcaag ctcttttgcg
    24961 agcattttaa tcaggtatgt tccataatca gcacgctctt gcccttgttg ctcctgttca
    25021 aaaatccgtt ttccgatgtg ccaatacatc agcacacgtt ggaaatctac cgcacgaacc
    25081 gcattttcac gagcttgagc aataatttgt ttaatatctt agatcatcgt tgtttctatt
    25141 aacataaaag cctccgtttt ggattaagtt tatgcttaat ctatccggag gcaatttctt
    25201 tcactcaact tttcgagtca tatcacaatt ttattttgtt aaatttaatt ttgcacaaac
    25261 gcttgcgttt gaacatcagc tttgctgatg gctcgaagag cgaacgtagt gagtaaattt
    25321 ttgctctaat ttgagcgctt gttgggcaag ttcttcgact tggtcataga aatgcaccgc
    25381 ctgtaaacga tgcaccaaca ccggtctttc ttggattaaa ttctcaacca aatgttgatt
    25441 attttgctca aattgagctt ttactttacc tagcaatttt ttagcaagat cggtgctagt
    25501 ttgagccact acatcgccaa caaaagggga aagcagttcg gcagggtctt tttcgagctg
    25561 ttcaagtaat gcagtgaaat gttgcaacac ttgaatatcg cccgtcagca ccaacgattt
    25621 attattaatc agctcggtta atttttgctt atccgctagt ttcggcaggg tgtcaaatgc
    25681 cagttgcacc gtacaatctg cttccccctc gtagttgcca agccaatcgg ttcggctttc
    25741 gctaaacaac acaaaaaagt cgattttagg cgaagttagg gcgattttta gcacttttcc
    25801 ggacaattta cgcaaattcg gctcaatatg aggcgagcgt ttaagtaacg cattaaaagc
    25861 ggtttcaatc agaccaaagg taaattgcgg gagcattaat tgttgtttta cattatttaa
    25921 cattcgtacc tacttaccct cttcactttt gggagaagga tagattgttc ttcattaaga
    25981 agcaaaatca gggagagggg tatttgcaaa atattgaata aatatgaccg cttgccccct
    26041 ctctctgctt atttcgctaa acgctcataa gcggtctctc tcccacaaag ggagagagtc
    26101 atttaagaga aaactaaaat ttataacctc tgtgtaatgc cacaatgccg gcacttaagt
    26161 tgtagtaatt cacgctttca aagccagttt gttccatcat tgcttttagc tcgtcttgtt
    26221 tcgggtgcat tcggatcgat tcagctaaat agcggtaact ttcggcgtca tttaccacca
    26281 cttcgcccac tttcggcaaa atattgaatg agtagaaatt ataaagctgg ctgattgggt
    26341 cgataatcgg ttttgagaat tccaacacaa gtaagcgacc gcccggtttt agcacgcgga
    26401 acattgaacg tagggctttg tctttgtcgg taacattacg caagccaaaa ctaatcacaa
    26461 tacaatcaaa agtgttatca gcaaaaggca agcattcggc attcgcttga acgtagctca
    26521 catttccaac cacgcctaaa ttgcgtaatt tttcccgccc gacttccaac attgagctgt
    26581 taatatcggc taaaatcacc tcaccacttt caccaacaat gcgagagaat tttgcggtaa
    26641 aatcacccgt gccgccggca agatccagca ctttttgccc tttacgcacg ccactgcaat
    26701 caatggtaaa gcgtttccac actcgatgaa tgccgaaaga aagcaaatcg ttcattaggt
    26761 catatttgcc tgccaccgag tgaaacacat ttgcgaccag ttgctgtttt tcttctttcg
    26821 ctacggtttt aaacccaaag tgggtggttt ctgccgattg ttgcacttct tgttgcactt
    26881 catctttagg tgctaattgt tctacatcgc tcattttctt gtctctagtt gcaaaattta
    26941 ggcgtaacca tagcaaaaaa gcggtcgttt ttctttaact ttttgcaaat tttcttaagt
    27001 aaataaccgc tttcttgact agaaaagcca aattctgtaa cattcgcaca ctattttttc
    27061 ttgaggatta cacattttgg acagtcatag tcgatactta cccgtttaac ctatcttgtc
    27121 taacctcaat gttaccgaca aggtcggtaa tgctcgccta gtatctttgt tcctttttgt
    27181 tccaagcctc ctaactattt ggagctaaac atgatccgtg cttttggact agataacgca
    27241 tgtttaatca gcgttgatga aactaaccca actttattaa atgatgcgat ttggattgat
    27301 ctcatcgatc catcagaagc tgaacgaacc gtattagaaa accgcttaga ccaaacactc
    27361 gctgaagaac gtgaattgga agacttagag gcgtctgccc gtttctttga agatgaagac
    27421 ggtttgcacc tgcactcgtt cttttactgc ttagatgatg acgattacgc cgatattgcc
    27481 actgtcgcct tcactattcg tgacgggcgt ttgtttacct tgcgtgatcg ggatttaccc
    27541 gcatttcgct tgtatcgaat gcgttcccgc cgtgagaaat tgattgacag caacgcctat
    27601 gaactcttac tcgatttatt tgagaccaaa atcgagcagc ttgcagacgt aattgaagaa
    27661 gtctatgctg acttagaaaa attaagtcgg gttattctaa acggtcagca agaaaatgag
    27721 aatttcaatg atgccctttc tcgcttaact gaatttgaag atgcaagttc aaaagtgcgt
    27781 ttatgtttga tggatacgca acgggcgtta agtttcttac tgcgtaaaac ccgtttgccg
    27841 aataatcagc tagaacaagc ccgtgacatt atgcgagata ttgaatctct gcaaccgcac
    27901 aatgaatcct tgttccaaaa agtgaatttt ttaatgcaag cggcaatggg ttatatcaat
    27961 attgagcaga accgaattat gaaattcttc tcggtggtgt cagtgatgtt cctacctgct
    28021 acgctggttg cttctactta cggtatgaac tttgaattta tgccggaact tcatttccaa
    28081 tatggctacc ctatggcgat tggtttaatg attgttgccg cctccgcccc ttatctttat
    28141 tttaaacgta aaggttggtt ataatttatt tttaaagcct atagttgaat aacttaggct
    28201 ttcttatttt aatgaatatg ttcacctcta aaaacaaata aagattaaaa ctgtttacct
    28261 attatttatt cacatatata ctgtgagata ttcttttcat aggcaggaga tctattatgc
    28321 taagtaagct acaacgcttt accttaatga taaaaagcac catcattaag catccactgg
    28381 aaattttatt cgttacttac gtcacgattt tacttatcaa taatgtgagc gactacgaat
    28441 taatcaaacg ctttcaaaat ctaattgctc tttttcctat ttgctttatt ttgctttacc
    28501 tgatacgcga taccaaagct tattggctat tcgctccgat tccgatagca atcgtctttt
    28561 tctttggtca aattaattta acattattgg aagattctcg ttattgggct accatatttt
    28621 gtgtattcct ttgtttgatc agtcaatatt ggtacaaaaa caaccattat tttgtagccg
    28681 gaacaactaa taaattagtt aacattgtct ttgctacagt tttatctggc attatttttg
    28741 caacattaag cgctattacc atagccatta ttgctttatt tgatttaaat aaacaaaaca
    28801 actttcatat ttttgaaaaa tttggcattt tttctagttt ttgggcattc cctgttttat
    28861 ttttaactct tgaacaacag actaccaatg attctagata tctaaaccgc attagtgaaa
    28921 tgttactaaa ctggattttg tctccggcat taattatcta tactgcaatt atttatgctt
    28981 atgtaatttt tattgcggct aaggggcaaa tgccagatgg ggttgttgca aacgtagcgc
    29041 ttccctattt agctttcggc ctagctatac aagcggtgca attattacta aaaaatgcaa
    29101 aatggcagtg gttttattct cactttacct atttagcact tttgccgtta acattaattt
    29161 ggtatgccat ctatattcgt ttcagccatt atggcttaac tgaagcccgt atttatttag
    29221 tgattggcac aataacctta tctatttgct ataccttatt actatttaaa cagttggcgc
    29281 aatatcgtct cttttctgca gtgtcgatag caattatttt aatttcagtg tttattttag
    29341 atccgaaaac agttgcgctt aaagatcaaa ccaagcggtt ggacaactat ttgctaaaac
    29401 acaaattatt agatgtaaat aacaaaatca gcacaaaagc tgtacttaaa taccaagaat
    29461 cattaaatga aaaccgagat gaagccgaat atttttattc aatgctccac tatgttgcca
    29521 gaggaatgcc tgctgcacaa tttaaagaga aatatggcgt aaattcaagc tacgatttaa
    29581 tgagtgaaat aagagaaaga aatactgacc cacgttattt tgaagctact aattctgagc
    29641 tggttcgctt aactaaagca gatatggcaa atgctcgtga atatattaca tttagtagcc
    29701 aattatatcg gcctaattca ttttcccatc aaaaaataga aaataagcta tgccaaaaac
    29761 tcctttctca aggttactat tttgagggaa atatattaaa tattgagtat caatactcag
    29821 aaacggctca agactgctct tcaataacac aagatcctac tgaatttgtt atctacttta
    29881 aaggacttgg gactactatt gaatttaaca ttaacgatat tttgaaaaaa atctttgcta
    29941 aacatcagtt atctattacc cagcaacaca aaaatgaggt tttagaaaag attaaaggcg
    30001 atttactcaa aatggattta ggaaattcag tacttgggct taagcatatt gagttaagat
    30061 ttgaagacaa tatcggctat atagtagaaa gtattagtac acaatatatt atgctgaaat
    30121 aaaaggagat gctcgttcaa ttaaatttga acgagcattt ttcgttaaaa actcaattta
    30181 agcagccact caaaattagt ctcatttaac cgatattgcg gtttcaaatt cgggccgcaa
    30241 gagtttgagc caatgccgct cattttgtaa tcgacacaca gcacggtgga agggctttct
    30301 accaaatcat aactgtggct tttagtggtt agctcttcct gtgtgtaagg cgaaagatta
    30361 aaactaaacg gctgtggaga agtaacagtt atcccatttg cttgcacata atgcgtaccg
    30421 aaatggctgc cgttttcctg cggtttgaga taatcggtat gattttctcg ggcgctggtt
    30481 tgataagctc cgagtttcgc caaatggtat ttgtcgatat aactctcctg ctcgccatag
    30541 ccaaaatagc tcacttggtt attccgttta ttcaagaaaa accgcaagcc aaagcgaggt
    30601 aaaaacggca aatgagcggg gcgggttgcc tgaacctgaa tcgtcatttc gccattcggg
    30661 gcaagatgat aattcacttt cagggttaaa atccgacttt gagcggttgc cacaatgcca
    30721 cattcggcag taatgtttac gccgttttta tcttgcatca gttcggtatg atacgccctg
    30781 gtgtaacagt tatcgtagcc ggcttttttc caaaactcac gaattaagcg gtcgttatcg
    30841 gttggggctc gccaaatatt gaaatccaac ggttgctcaa ttactgcctc gccgtttttc
    30901 tcaatccggc tgaaaatgcc tttgagttta tcgaaagtgt agcgatagtc gccctgttga
    30961 atccgccatt catttgcaaa atcttgcaca aaaatgaccg cttgcgggcg tggattaagt
    31021 gctggagtga ccatcgcttg atgcagcgtg atttggtcaa agcctaagtg atgccctttt
    31081 tccaacagag ccgtgctttc atttaaagaa taatcaaggg ttaaaagttg caatttgccg
    31141 tttggttcgg gcagcgttag cggcaaacaa gcggtctgat ttggctgaca atttaccaaa
    31201 cattgtccct gcagggtggt ttcgccgttt tcgctgaaac agtaatgcac ggtcagataa
    31261 tcagctaagt cgctgaaatc caactgattt ttcagccaaa ttttgcccgc ttttaactca
    31321 gctcgcaccg ggcgattcac atttttcact tctaacaaat tagagtgtgg cacacgctgt
    31381 tgggaaacca agccgtccat acagaaattg ccatcgtgca aggtttcgcc gaaatcaccg
    31441 ccatagccgt atttttcggt cttctgttcg gcacttagct cagagttggg gagcagagga
    31501 gcatggtcgc accattccca cacaaagcca ccgcacgcac cgctgtagcg ttggaaggtt
    31561 tgccaataat cttccatatc accactcgaa ttgcccatcg cgtgagaata ttcacacaaa
    31621 ataaaaggtt tgtggttggc agagtcggaa aaatattcct ctaaccgctc ggtgcttggg
    31681 tacatctcgc tgtataaatc gaggtttgaa agatcgtttt gatgtgccga atgttggtaa
    31741 atcgaacctt cgtagtgagt taaacggctt ggatcccgtt gttttaccca acgggctgcg
    31801 acttcaaaat tttcaccaaa gccggattcg ttaccaagtg accaaataat gaccgaagtg
    31861 cggtttttgt ctcgctccac attggcaatg ttgcgatcta aaatcgcctg tttgaacagc
    31921 ggatctcttg caaaataaca gaaattatcg accgcttgtt ggcgaatttc ttcctgtttg
    31981 ttcgggtttg gcacattcag gaaaatgctg ttttccggac tttcaatata cactgcactg
    32041 gagccgtgag attcaagatc actttcggca atcagataaa aaccgagctg atcgcacaat
    32101 tcactaaacc acggagcgtt cgggtaatgg gcggtgcgaa tagcgttgat gttatgggct
    32161 ttcattaagc gtaaatccac caacgcttgc tcacggctaa tgctgtagcc ggttttcggg
    32221 tcggaatcgt ggcggtttac ccctttaaat ttaatcgggg cgttgttgaa tagcatcacg
    32281 ccattttcca cacgaatctg acgaaagccg attttttgct caataatttc gttttggtag
    32341 ctcaagcata gcgtgtagag tgtcggatct tccgcattcc acaaacacaa attgcaaatt
    32401 tcttggcaaa aatcaccgct tgtttgctcg cagactaagc ggttttcagg gtcgaaaagt
    32461 tgaaaatgca cagcttcggt gtaggtggaa aattgtgttt ccaccttgag ttctgccttt
    32521 gaaagatcag cgtttaactg gtagcggata aagaaatctt gcaggtagtt ttgctcacgt
    32581 tccaaaatat aaacatcacg gaaaatgcct gacattcgga atttgtcttg atcttccaaa
    32641 taactgccgt cacaccattt tagcaccacc acgacgaggc tgtttttgcc ctgtttaagc
    32701 tgtttggtga tgtcaaattc attggtgctg tggctgattt gcccgtagcc gacaaattcg
    32761 ccgtttacat aaacaaacag gcacgaatct acgccctcaa aatttagcaa atagcgtttg
    32821 ttaggcttgg ggttaaacgt gatttcacgc tgatacaccc cgcaagggtt ttggtgtggc
    32881 acataaggcg gatcaaacgg aatcgggtag ttgatgttag tgtattgatg ggcatcaaag
    32941 ccttgagttt gccagttaga cggcacgggg atttggtggg taaatttggt gttgaggaaa
    33001 tcctccggca gatcgtgcgg acttggatag aaattaaact tccaatcgcc atttagcaaa
    33061 gtaaataact cagattgttc ccgttccaac tgattcggcg tttgcccttt agcaaaagga
    33121 ataaaataag cgtggtgtag cgtggtatta aggtgcaaca cactcgggtc ttggtagtaa
    33181 ttcggtaacg acataaaagc cctatgatca aaaagatata aatacgaata cactttaatt
    33241 ctcttataaa atagggcaat caactatgtg aaaaattgtg aggcggatca caaaataatt
    33301 tcctcacctt tttccttcga ttccgttata atcacaagaa ttttttatgt catttttcaa
    33361 ggaatttacc aatgttatat ccaagcgaag aatttttata tgcaccggtt gagtgggttg
    33421 atcacagcga aggttacacc gatattcgtt accataaatc aaaagacggt atcgctaaaa
    33481 tcaccattaa tcgtccggaa gtgcgtaatg ctttccgtcc gcaaacggta aaagagatga
    33541 ttgaagcctt ttctgatgcc cgttttgatg aaaaaatcgg cgtcatcgta ttaaccggtg
    33601 aaggcgaata tgcgttctgt gccggcggcg accaaaaagt gcgtggcgat tacggcggct
    33661 acaaagatga aagcggtgtg catcacttaa atgtgttgga tttccaacgt gatattcgta
    33721 cctgcccgaa accggtggtg gcaatggttg ccggctatgc gattggtggt ggacacgttt
    33781 tacatatgtt atgtgattta accattgccg ctgacaatgc aaaattcggt caaaccggcc
    33841 cgaaagtggg gtcatttgac ggcggttggg gtgcaagcta tatggcacgt ttagtcggtc
    33901 agaaaaaagc gcgtgaaatt tggttcttat gccgtcaata taatgcacaa gaagcgttag
    33961 atatgggctt aatcaatacc gttgtgcctt atgctgattt agaaaaagag actgtgcgtt
    34021 ggtgtcgcga aatgctacaa aacagcccga ttgccttacg ttgcttaaaa gcagcattga
    34081 atgcagattg tgacggtcag gctggcctgc aagagcttgc tggtaatgca acaatgttgt
    34141 tctatatgac agaagaaggg caagaaggac gcaatgcgtt caacgagaaa cgtgagccgg
    34201 acttcagcaa attccgccgc aatccataat tgacggcaaa tacaagcggt tcgattttgc
    34261 aaaaaatttg caaaaatcga ccgcttacct tttctaattt aagttaattt tatgtcagat
    34321 gttgagttaa acgagcagag cgagcaagag cctgagcaaa aaccgaaaaa gcgaaactat
    34381 ttcctttcaa ccttattcaa aatcggggtg ataggagctt gcagtatggc tttttacggc
    34441 atttatttag acggtaaaat ccgtagcaaa atggatgggc agatatggga attaccagct
    34501 gaggtgtatg ctcgtattga aagcattaaa attgaagaca acttaacgct tgagcaaacc
    34561 aaacaagcgt tgctggataa cggctatcgt caagtttctc aagttgcgac accaggcgat
    34621 ttcaaaattg aagaaaatca gctggtgttg ctacgccgag ctttcccgtt tccagaaaca
    34681 ccggaatcgc aacgagtgct tcgtttaact ttcaaacaag ataaattaac ttatattgaa
    34741 gatttggtgc agggtaagtt gatcgaggag ttccgcttgg atccgaaatt actggcgtta
    34801 ctgcattccg atagcgatga agaacgtcaa gcattacgct tacaacaata ccctcgcttg
    34861 ttaattgagt cactgatttt aaccgaagat cgccgctttt atcagcacga tgggattagc
    34921 ccaatcggta ttgcccgtgc tttaatcact aactaccaag ctggcagaac agtgcagggt
    34981 ggcagtacct taacgcaaca gttagtgaaa aacttgttct taagtaatga aagatcgttg
    35041 gtgcgtaagg taaatgaagc gttaatgtcg gtgattttag acttccgtta cgataaaaac
    35101 cgcattttag aaacctatct caacgaaatt tatttagggc agaacggtag ctaccaaatt
    35161 cacggttttg cattggcaag ccaattctat tttggtcgtc cgatccaaga gattagctta
    35221 gaccaaattg cgttattggt gggaatggta aaaggtccat cactgtataa cccgtggcga
    35281 aatccgcaag gtgcggtaga gcgacgtaat gtggtgttgc gattattgct ggatcatcaa
    35341 gtgatcaatc aagaacttta cgctctgtta agctcccgcc cgcttaatat tcgtgaaaaa
    35401 ggcacgattt accgtgagca acctgccttt atgcaggcat taaccattga tttgaaaaat
    35461 gagttaggcg aaattaagtc agctcaactt tccggtacta aaatttttac gacccttgac
    35521 cgtaaacagc aacgttcagc cgaacaagca gtgattaccg gtttggaaga tctggaaagt
    35581 aaaaataaaa aagtcagcga tttgcaatcg gctattgtcg tggcggaata ccgcacaggt
    35641 aaagtgaggg cgatagtagg agaccgctta acccaatttg ccggctttaa ccgtgcgatt
    35701 cagtcaaaac gccaaatcgg ttctttagtc aaaccatcgg tttatgcgat tgccttggca
    35761 cagcctgaat tattccgttt aaatacaccg atccaaaata aacaaatttc aattaaggtt
    35821 ggttcaacct actggacacc ccgtaactac gaccgcagtt ttagtggctc ggtgatgtta
    35881 atggacgcct tagtccgctc tctgaatatt ccaacggtga atattggtat gaaagttggc
    35941 ttaaaaaaag tcattgccaa acaaaaagag atgggctggg ataatgcgga aattccgcct
    36001 tacccatcaa ccttgctagg ttcatattcg atctcgcctt acgatgtaac ccgctcttat
    36061 caagtaattg ccaacgaagg gctgaaaaca ccattaacca ccattgaggc gattatttcg
    36121 cacaatggcg aaatgttcta tcagcgagat agcggcaaag tgagcgagca ggtgcttcca
    36181 ccggaagctg cggttcaaac aatgtatgcg atgcaacagg ttgtggaacg aggtacggct
    36241 cgtagcttac aaaacgattt tgccaaactg aaattagccg gcaaaaccgg tacaaccaat
    36301 aacgctcgag atacttggtt tgtgggaatt gatggcgaac acgtcacaac cgtctggctg
    36361 ggtaaagata acaatgggga taccaacctc accggttcaa gtggtgcatt gtatgtgtat
    36421 aagcaatatc ttgagagagc cttgcctcag gcgtatagat taccgaaact taatacgatg
    36481 caatgggtgg ggattaatag ctatggtagc tggaattgcg atagtggcag acaaattcca
    36541 gtttggcgag ataaagggca acgttattgt accagtgcag gtaatgtagt ggctacagaa
    36601 aaaccaagtg tttgggatgc actttcgctg aaaaaagaaa atatcgaggc taaagcagaa
    36661 gaagctgaag ggaagcaacc aatccctact gaagaagttg caccaattga ataaaaataa
    36721 atttgatagc cattatcatt caagatacac aagctgatag attctaccta taaaaagtat
    36781 atattataac tatttgctag ttttcatttt ggattgtaat atagtaataa attaaataag
    36841 cagtatctaa tttaattttt taagattaac aattaagagg agcatattat ggcaatgtca
    36901 aatatcggtt tagataaaga aatcgcaaaa aaattagcag atgagttaaa tggtttatta
    36961 gctacttacc aagtgtttta cactaatgta cgtggctacc attggaatgt acgtggtgtg
    37021 aacttctttg aattacatgc aaaatttgaa gaaatctacg atgatttagt gacaaaagta
    37081 gatgaaattg cagaacgtat tttaacctta ggtcacacac ctcaaaatgc gttcagccaa
    37141 tatttaacca agtcacaaat tcaagaacat attggtgttt cagctgcaca agaatgttta
    37201 cgtggtactt taaatggttt caaaacatta ctgggacaac aacgtgaaat tcttgctcta
    37261 gcaaatgatg caaacgatga aggtactgct tctcaaatga gtgattacat caaagaacaa
    37321 gaaaaattag tatggatgtt cactgcagct tgtgctgaat gttcagacta cgcacaaggt
    37381 tgttcttgta actaagttgc aataatataa ttaacccccg ataatgaaag attatcgggg
    37441 gttacttttt cagatagcta tgtcgcaagg atttcaattt aaacagtttt ttattcggca
    37501 cgacagatgt gcaatgaaag tcaatacaga tggtattcta ttgggagcga ttgctcacat
    37561 aaaagattgt cagaatattt tagatctggg tataggttct ggtttagtag cacttatgct
    37621 tgctcagaga acagatgatt gttgtcacat tactgcgttg gaacttgaac caaatgccta
    37681 ccaacaagcg gtcgaaaatg cccaaaattc tgcatgggca aatcggattt ccgttttgca
    37741 aggtgatgtg atgcagcagg catttgaaca gaaatttgac ttgattgtta gtaacccacc
    37801 ttattttgca gattcacttg cagctcgaac cacagagaga gatttagctc gctcaattag
    37861 ccattacagc cacttgaatt ggctggcaaa agcaaaacca tggttagcag agaacgggaa
    37921 aattacactg attttaccta tagcagctgc agaaaaatta gttgaccaaa gtgaacaaat
    37981 tggattgtat tgtgttgaac aatggttaat ttttaccaag agcggcaaat tggctaaacg
    38041 cagtatagtg agttttagtt taaacaagca aaagcgtgaa cataaagagc tgatcatcta
    38101 tgatctagat aattgttaca ctactgagtt taaaagactt acccaagatt tttatttgaa
    38161 tttttaattt actccccggg ttagtgtttt ccacaaatct tcttcagcta cgatgatcta
    38221 gccttaagct aaaaagcaga ttaccaccca agataatccg ctttttagac ttagctatta
    38281 tgccaaactt gctaccatta ccgctttaat agtgtgcatt cgattttctg cttgctcgaa
    38341 tgccacattc attggcgatt caaacacctc ttcggttact tcaatgccgt ttgccagtgc
    38401 cggatatttt tcggcgatct ctttaccgac tttagtttca ctgttgtgga acgccggtaa
    38461 gcagtgcata aatttcactt tcgggttgtc ggttgcttgc attaattcag gcgttactcg
    38521 gtaaggcatt aataaatcta tacgttcagt ccagctctct agcggttcac ccattgaaac
    38581 ccaaacatca gtatgcacaa aatcgacacc tttaattgca gtctcaatat cttcggttac
    38641 cgtcattctt gcccccgatt cagctgcaaa tttttcacac attttcacga atgcatcttc
    38701 cggtaataag gctttcgggg cacaaattcg cacgtccatc cccaatttcg ccccaatcaa
    38761 caggagtgaa ttacccatat tattgcgagc atcgccgata tagacataac tgatttggct
    38821 aagcggtttt tcgcaatttt cgatcatcgt tagcacgtca gccaacattt gggttgggtg
    38881 gaattcatcg gttaagccgt taaacaccgg cacgccggca taatcggcaa gctcttgtac
    38941 taccgattgt ttaaagccgc gatattgaat cgcatcatac attctgccta gcactcgggc
    39001 ggtatctttc attgattctt tatgcccgat ttgcgaggag ttcgggtcaa tataggtaac
    39061 gtgagcccct tgatcgtaag ctgctacttc aaaggcacaa cgagtacggg tcgaggtttt
    39121 ctcaaaaatt aaggcaatat ttttgccctt taatttttgc tgctcagtgc cggcatattt
    39181 cgcccgtttt aaatctcttg ctaaatccaa caaaaagcga atttcacgct cagtgtggtt
    39241 tactaaactg agtaaatgtc tgttttttaa gttaaatgcc attttgtttc tccctg
//
LOCUS       DANMCL010000009        39109 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.009, whole genome shotgun sequence.
ACCESSION   DANMCL010000009 DANMCL010000000
VERSION     DANMCL010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 39109)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39109)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39109
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.009"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            53..871
                     /locus_tag="PXF40_000447"
     CDS             53..871
                     /locus_tag="PXF40_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HDL5801824.1"
                     /translation="MQEIKLFEQKSVRSHYDEEKDKWYFSIIDVIAILTESLDPSAYW
                     RKLKQRLKAEGNETVTNCHGLKMPSADGKMRLTDVADTEQLFRLIQSIPSPKAEPFKQ
                     WLAKVGYERLQEINDPSQSLDRARENWQKMGRSEKWIQQRMMGQETRNKLTDYWKSSG
                     VEQPQDFAFLTNVIHQEWSGLSVQKHKSLKGLKSQNLRDHMSEAELLFTALAELSSRQ
                     IAESMQAVGVDENAQAGKQGGNIAKNARQELENKTGKSVVTGENFLPPAKNEEE"
     gene            complement(965..1444)
                     /gene="trmL"
                     /locus_tag="PXF40_000448"
     CDS             complement(965..1444)
                     /gene="trmL"
                     /locus_tag="PXF40_000448"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HDL5801825.1"
                     /translation="MLDIVLYEPEIPQNSGNIIRLCANCGFRLHMIEPFGFGWDDKKL
                     RRSGLDYHEFVDIQKYKNFEDFLERAKPKRLFALTTRGEQNHSDVKYELGDFLMFGPE
                     SRGIPKPLLAEMPMSQKIRIPMCKDSRSMNLSNSVAVVVYEAWRQFGYQNAVAAQSI"
     gene            complement(1621..3780)
                     /gene="rlmKL"
                     /locus_tag="PXF40_000449"
     CDS             complement(1621..3780)
                     /gene="rlmKL"
                     /locus_tag="PXF40_000449"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HDL5801826.1"
                     /translation="MTNQTTYFATAARGFEEILKTELEQICAAECKVAQGGVHFTTTQ
                     KGAYQALLHSRLASRILLPLISTKIFSDSDLYASIVSFNWADLFDPRDTFYIDFSGTN
                     REIRNTQFGAMRVKDGIVDYFERKGFARPTVDKDNPDVRIHVYLDRENVVVSLDLSGD
                     ALHIRGYREETGKAPLRETLAAAIILRSGWKVGTPLVDPMCGSGTLLIEAAQMAANIA
                     PQLHRKHWGFNAWKGHQQAMWKAVLDEAFRNVELGAVGENCNSSLQKMFFGFDLDHRV
                     LTKAKQNAKNAGVDHLIQWQQGDVAALKNPIPEKIGTVVCNPPYGERLGTTPALIALY
                     SVFGQRLKQQFAGWNASIFSGEPELLNCLRLRSARQFKAKNGPLDCVQKNYSISEHNK
                     RSDLDENLQFEQNAQVAPDFANRLTKNIKKIEKWAKQQGIDAYRLYDADLPEYNLAVD
                     RYGDHIVVQEYQAPKNIDEQKARQRLLDAVSATLYVTGVETNKLVLKVRQKQKGTNQY
                     EKLANKGEYFYVNEYGAKLWVNLTDYLDTGLFLDHRLTRKMVGEMAKGKTFLNLFAYT
                     GSATVHAALNGAKSTTTVDMSNTYLNWAEQNLELNNLSLRHHRLFQADCLQWLAECRE
                     RFELIFVDPPTFSNSKRMENSWDVQRDHIELMKQLKRILTADGTIVFSNNKRGFKMDF
                     DGLAALGLTAENISHKTLPLDFERNPQIHNCWIVKNV"
     gene            3978..4607
                     /locus_tag="PXF40_000450"
     CDS             3978..4607
                     /locus_tag="PXF40_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5801827.1"
                     /translation="MTAPTQILLIDDHPLMRQGMRQLLELDHQFSVVGEASNGTDGIK
                     LALRLEPDVIILDLNMKGLSGLDTLRSLRAQGIDARIIVLTVSDEQSDVFALMDAGVD
                     GYLLKDTDTPELLDNIRKAAAGEVVLSETVRQHLLNRQPENDPLSCLTDRELDVLQWL
                     ATGMSNKQIAAQLFISEETVKVHIRNLLRKLNVHSRVAATVLYLEQQKG"
     gene            complement(4643..5653)
                     /locus_tag="PXF40_000451"
     CDS             complement(4643..5653)
                     /locus_tag="PXF40_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5801828.1"
                     /translation="MATMKDIARLAQVSTSTVSHVINNSRFVSEEIRERVQRVVKELN
                     YTPSALARSLKVNETKTIGMLVTATGNPFFAEVMAGVEQYCQQHQYNLIIATTNGDTE
                     RLQHHLQMLMQRKVDGLLLMCGDTRLNADESLNIPLPLVVLDWWFTELNADKIFENSI
                     SGGYLATKTLIEAGHSKIAIITGNLKKSLAKNRLEGYKKALAEANIPLNPNWVFESHF
                     DFAGGVNGMNALLAQSEKPTAVFACSDTIALGAYQAIWQQGLRIPQDISIIGYDDIEL
                     AKYLSPPLSTISQPKAELGRLAVETLLKRIRFKSTDFQTIMLEPELVLRHSIQTINKN
                     AE"
     gene            complement(5667..6596)
                     /gene="rbsK"
                     /locus_tag="PXF40_000452"
     CDS             complement(5667..6596)
                     /gene="rbsK"
                     /locus_tag="PXF40_000452"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HDL5801829.1"
                     /translation="MKKLTVLGSINADHVISVPYFAKPGETLTGHSCHIAYGGKGANQ
                     AVAAARLGAKVSFIGCIGSDDIGKAMKSAFEQDGIDTRSIKTIPNEMTGIAMIQVAES
                     GENSIVISAGANGHLDETVVAKCAAEITQADYLLMQLETPLPAIVQAAKLAQQNGTKV
                     ILNPAPARALPDELLNLLDMITPNETEAEILTGVKVVDEASAIQAAQVFHQKGIEKVL
                     ITLGSKGVFVSENGVGKIVAGFRVQAVDTTAAGDTFNGALVTAMLEDKPLDQAIRFAH
                     AAAAISVTRKGAQPSIPTRQETLDFLSQQAVSF"
     gene            complement(6717..7595)
                     /gene="rbsB"
                     /locus_tag="PXF40_000453"
     CDS             complement(6717..7595)
                     /gene="rbsB"
                     /locus_tag="PXF40_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
                     /protein_id="HDL5801830.1"
                     /translation="MKKLTTIASAVMLSLSVAATASAKETIALAVSTLDNPFFVSLKD
                     GAQKKADELGYKLVVLDSQNDPAKELSNVEDLTVRGAKVLLINPTDSEAVGNAVAIAN
                     RNKIPVITLDRGAAKGEVVSHIASDNVAGGKMAGDFIAQKLGSGAKVIQLEGIAGTSA
                     ARERGEGFKQAIEAHKFNVLASQPADFDRTKGLNVTENLLSSKGDVQAIFAQNDEMAL
                     GALRAVSSAKKEVVIVGFDGTDDGVKAVESGKLAATIAQQPELIGSLGVETADKVLKG
                     EKVEAKIPVDLKVISK"
     gene            complement(7618..8586)
                     /gene="rbsC"
                     /locus_tag="PXF40_000454"
     CDS             complement(7618..8586)
                     /gene="rbsC"
                     /locus_tag="PXF40_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HDL5801831.1"
                     /translation="MATQTKQFQLGRFLIEQRSFVALFILIVSVSMINPDFFSVDNIL
                     NILRQTSVNAIIAVGMTFVILIAGIDLSVGSVLALTGAVAATLVGSELPILLVIPLVL
                     LLGTAFGGISGAIVAKGKVQAFIATLVTMTLLRGITMVYTDGRPISTGFSDQADAFAF
                     IGTGYLFGIPVPIWIMAVVFGLAWYILKHTPIGRYIYALGGNESATQLSGINVNKIKI
                     FVFAVSGFLSALAGLIVTSRLSSAQPTAGVSYELDAIAAVVVGGTSLMGGKGRVMGTL
                     VGALIIGFLNNALNLLDISSYYQMIAKALVILAAVLADNYLGTKKV"
     gene            complement(8596..10092)
                     /gene="rbsA"
                     /locus_tag="PXF40_000455"
     CDS             complement(8596..10092)
                     /gene="rbsA"
                     /locus_tag="PXF40_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
                     /protein_id="HDL5801832.1"
                     /translation="METLLKMSGIDKEFPGVKALSNACLSVYGGRVMALMGENGAGKS
                     TLMKVLTGIYSKDAGSISYLGKEVTFKGPKDSQEAGISIIHQELNLVGNLTIAENIFL
                     GRESKTAWGAIDWKKMYAEADKLLARLGVKHSSHQLCAELSIGEQQMVEIAKALSFES
                     QVIIMDEPTDALTDTETASLFKVIRELKAENRGIVYISHRLKEIFEICDDVTVLRDGQ
                     FIGERVIADIDEDQLIEMMVGRRLEEQYPHLHQERGELLLEVKNLSGSGVNNVSFQLH
                     KGEIVGISGLMGAGRTELMKVLYGALPKTAGSIELNGKAISNHCPQDGLNNGIVYISE
                     DRKGDGLILGMSVKENMSLTSLDHFSKAGSIRHDAEKLAVDDFIEMFNIKTPSREQQI
                     GLLSGGNQQKVAIAKGLMTRPNVLILDEPTRGVDVGAKKEIYQLINEFKKDGLSILMV
                     SSDMPEVLGMSDRILVMHEGQISAEFSRAEATQEKLLAAAIGKSTGLN"
     gene            complement(10102..10521)
                     /gene="rbsD"
                     /locus_tag="PXF40_000456"
     CDS             complement(10102..10521)
                     /gene="rbsD"
                     /locus_tag="PXF40_000456"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005753460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HDL5801833.1"
                     /translation="MKKTLNLNAQLSHSIATLGHTDSLTVCDAGLPIPNTIERIDLAL
                     TAGVPSFLQTFDVVVSELFVERVLLAEEIKHKNPQVLAALLERLTQLEQTQQNKIQID
                     YVNHEIFKEQTHYSKAVVRSGECSPYANIILYSGVPF"
     gene            10751..11011
                     /locus_tag="PXF40_000457"
     CDS             10751..11011
                     /locus_tag="PXF40_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001196283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HDL5801834.1"
                     /translation="MALLITHKCTNCDMCLPECPNEAISVGDDIYIIDPVLCTECVGH
                     YEKPTCQKVCPITNCIIKDPDNIETEEQLWERFVMIHHPDQI"
     gene            complement(11043..11933)
                     /locus_tag="PXF40_000458"
     CDS             complement(11043..11933)
                     /locus_tag="PXF40_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HDL5801835.1"
                     /translation="MAMNFKQVSQSYPNLCVPLSQYCLIEIAGVDAEKYLQGQLTCDV
                     AKISVGEHTLTSHCDPKGKMSALLRLYRAENEKFMAIIHRSLLPEALTQLKKYAVFSK
                     VTFTELDTPLYGMAGEAAFAKLSENMTALRLTTGQPRAIVWGEELETTADEQLWTLMD
                     IQDGIPVLLQQNQFELIPQATNLQALESAISFTKGCYIGQETVARAKYRGANKRALFT
                     LAGNFESEISLPEVASAIEMQLGENWRATGTVLTSATDENTLWVQVVLNKDVEPNTKF
                     RANGVALEMVELPYSLAENE"
     gene            complement(11942..12805)
                     /locus_tag="PXF40_000459"
     CDS             complement(11942..12805)
                     /locus_tag="PXF40_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HDL5801836.1"
                     /translation="MIYSMTAFAHLEMKKEWGNAVWEIRSVNQRFLETYFRLPEQFRN
                     LEMTLRERLRSALTRGKVECSLRIDLSKTQNSEIALNKEYAAQVVQSLKWLKETANEG
                     EINLVDVLRFPGVVDNESQDLDQIAQDLLAGFEQILADFIAMRAREGENVQALILQRL
                     EAISVEAAKVQAQMPEILQWQKDRLQQRFDELNLQLDPQRLEQEMVLLAQRVDVAEEL
                     DRLQLHVKETTNILKKGGAVGRKLDFMMQELNRESNTLASKSINADVTNSAVELKVLI
                     EQMREQIQNLE"
     gene            13086..13802
                     /gene="rph"
                     /locus_tag="PXF40_000460"
     CDS             13086..13802
                     /gene="rph"
                     /locus_tag="PXF40_000460"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001261764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HDL5801837.1"
                     /translation="MRPNNRANNQVREIKITRNYTRYAEGSVLIEFGETKVLCNATVE
                     ESVPRFLKGQQQGWVTAEYGMLPRATHSRTQREAAKGKQGGRTMEIQRLIARSLRAVV
                     DLKALGERTVTVDCDVIQADGGTRTASITGACVALYDAMNKLVANGTLKTNPMKGLVA
                     AISVGIVAGEAVCDLEYLEDSNAETDMNVVMVEDGRLVEVQGTAEGEPFSHQELLTLL
                     DLAKQGISQLVEAQRKALAE"
     gene            14026..16325
                     /locus_tag="PXF40_000461"
                     /pseudo
     CDS             14026..16325
                     /locus_tag="PXF40_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759321.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(16403..17104)
                     /locus_tag="PXF40_000462"
     CDS             complement(16403..17104)
                     /locus_tag="PXF40_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HDL5801838.1"
                     /translation="MDLQNRENFLNKLAQRMGRPRQNVPEPIPVLENNHAITRLTDRP
                     QPQLCQEFIDFARVMMADVVEAKEADLPQAIIDICEKYGGASVIVNNDQRLKDLGITA
                     AIQAKYEDSYVWDFNQAETNFEKARTANIGVVYGEYGLAESGGIVLFSDKEFGRSVSL
                     LPEKSVVVLRKSTVLPRVAQLAQILHEKAQRGERMPSCVNIISGPSATADIELIKVVG
                     VHGPVNKIYLVIDDL"
     gene            complement(17109..18518)
                     /locus_tag="PXF40_000463"
     CDS             complement(17109..18518)
                     /locus_tag="PXF40_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HDL5801839.1"
                     /translation="MSYLQTNTLPFKQRVEQQVNNEIVRKALVKAQETIGANRQRMVD
                     ELGNWEEWRDDAKAIRNHVLANLDAYLYQLSEKVTQNGGHVFFAETAEEATDYIKNVA
                     KAKNAKKIVKSKSMVTEEIGMNHVLEAEGIKVVETDLGEYLLQIVGDKPSHIVVPAIH
                     KDRHRIRQEMHDVLGYQGSETPEEMTAFVRQKIREDFLEADIGISGCNFAVPETGSVC
                     LVTNEGNLRMATTVPKTHIAVMGMERIAPTFKEVDVLITMLARSAVGAKLTAYNTWLT
                     GPRLEGETDGPEEFHLVIVDNGRSKILESEFQEVLRCIRCGACLNTCPAYRQIGGHGY
                     GSIYPGPIGSVISPLLGGYEEFKELPYACSLCTACNSVCPVKIPLAQLILKHREKIAD
                     AGLTPMAERLSIFGFNFANSHPTLWKVGVKVGAKVASKLIKNGKAPVNFGALGEWTKA
                     RDLPTAEGESFREWFNNRG"
     gene            complement(18520..19251)
                     /locus_tag="PXF40_000464"
     CDS             complement(18520..19251)
                     /locus_tag="PXF40_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HDL5801840.1"
                     /translation="MNVNFYVTCIADVMKAGVAKNTVLLLEKLGCKITFLEKQGCCGQ
                     PAINSGYTKQALAGMKNLVETFEANDYPIVAPAGSCVYAIKTYPDHFERFGEKEWAER
                     AKKVADRFYDLTDFIVNKLGVKDVGAYLPGKAVYHPSCSLFRKLGIKDEPIALLQHVK
                     GLELLPIKNQETCCGFGGTFSVKMAEISGEMVKEKVANVDTDEPDYLIGADVSCLMNI
                     GGRLSREGKPIKVMHIAEVLMQGGK"
     gene            complement(19395..20999)
                     /locus_tag="PXF40_000465"
     CDS             complement(19395..20999)
                     /locus_tag="PXF40_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HDL5801841.1"
                     /translation="MALFLSVFPIVLLIYLMVKRNALPSYVALPLTALLIFVLQLTYF
                     GNDTTLIFANIIAGLGDVLTPITVIFGAILFNRFSEVSGATNTMRKWLGTINPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILVGLGFKPLQVAMLALVMNSVPVSFGAVGT
                     PTWFGMGPLLKDGLLTDAQVLEIGSITALIHSIAAFIIPVMALRLIVSWKEIRQNIVF
                     IYISIFACVIPYFIIAQFNYEFPSLVAGAIGLLVSVWVANMGIGLAKSENHLDGDKAT
                     FGEVAKALLPTGLLIFILVITRIQQLPLKAMLNDATAWIVSSLGFANFEISQGLIFAL
                     KNILGTNVATSYKLLYVPALIPFVVTVLICLPIFSVSGKNTQEIFGTSFKQVKKPFLA
                     LLGAIVMVKLMLIGGVDSMVQIIGKNFAEFTGQSWTLFASFLGAIGAFFSGSNTVSNL
                     TFGTVQYATAQQVGLSVTLILALQSVGGAMGNMVCINNIVAVCSVTGIEKQEGNIIKK
                     TAVPMFVYGVIAAISALFIVPMFYNL"
     gene            complement(21289..22380)
                     /gene="ychF"
                     /locus_tag="PXF40_000466"
     CDS             complement(21289..22380)
                     /gene="ychF"
                     /locus_tag="PXF40_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HDL5801842.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVV
                     PMPDPRLDALAEIVKPERVLPTTMEFVDIAGLVAGASKGEGLGNKFLANIRETDAIGH
                     VVRCFENDDIVHVAGKIDPADDIEIINTELALADLDSCERAIQRLQKRAKGGDKDAKF
                     ELSIMEKILPVLENAGMIRSVDLDKDELHAIKGYNFLTLKPTMYIANVNEDGFENNPY
                     LDRVREIAEKEGAVVVPVCAAIESEIAELDDEEKVEFLQDLGIEEPGLNRVIRAGYRL
                     LNLQTYFTAGVKEVRAWTVSVGATAPKAAAVIHTDFEKGFIRAEVIAYQDFIDNKGEA
                     GAKEAGKWRLEGKDYIVQDGDVMHFRFNV"
     gene            complement(22566..23153)
                     /gene="pth"
                     /locus_tag="PXF40_000467"
     CDS             complement(22566..23153)
                     /gene="pth"
                     /locus_tag="PXF40_000467"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HDL5801843.1"
                     /translation="MSEIKLIVGLANPGVKYEETRHNAGEWLINELARIYNVSLKEEP
                     KYFGKVAKINTAQGEVRLLVPTTFMNLSGKAVGALANFYRIKPEEILVAHDELDLPPG
                     SVKLKKGGGHGGHNGLKDIIAALGNNKEFYRVRIGIGHPGHKDLVANYVLGKPSPSDQ
                     TLLNSAVDEAARCVEVLFKDGMVKATNRLNSFKAN"
     gene            complement(23226..24101)
                     /locus_tag="PXF40_000468"
     CDS             complement(23226..24101)
                     /locus_tag="PXF40_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HDL5801844.1"
                     /translation="MMKKFIPVMIAALVLSACSSQPAKRKSTPRIKATAAYIPTENSA
                     YVVFDLNQKKFLEGKNFNLVRPIASVTKLMTAVVFLEENRYGASCQTQILPSDADFLK
                     GTTSPLPKNLNIACSELLKAMLVRSDNYAAHALAHATHLNKAQFLARMNSKAREIGMT
                     QTYFGDSSGLSSDNVSTVVDLAKLAGYAASKPEIQQLSNSPLVSVYAGGRYFSMKNTN
                     SMVRSQSYQALVSKTGYTREAGYNLAFIAKGDCRGKRIGVVSLNNDNAASRTDFTESM
                     LAKYQCVPNPYRQYD"
     gene            24323..25903
                     /gene="prfC"
                     /locus_tag="PXF40_000469"
     CDS             24323..25903
                     /gene="prfC"
                     /locus_tag="PXF40_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HDL5801845.1"
                     /translation="MSYPQEVNKRRTFAIISHPDAGKTTITEKVLLYGNAIQTAGSVK
                     GKGSAQHAKSDWMEMEKQRGISITTSVMQFPYNDCLVNLLDTPGHEDFSEDTYRTLTA
                     VDSCLMVIDSAKGVEERTIKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVESVLK
                     IKCAPITWPIGCGKLFKGVYHLYKDETYLYQTGQGHTIQEVRVVKGLNNPELDQAVGD
                     DLAQQLRDELELVQGASHEFDHTEFIKGELTPVFFGTALGNFGVNHFLDGLTEWAPAP
                     QARQSDEREVSPSEEKFSGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLKHVRIG
                     KDVVISDALTFMAGDRSQAEEAYAGDIIGLHNHGTIQIGDTFTQGENFKFTGIPNFAP
                     ELFRRIRLRDPLKQKQLLKGLVQLSEEGAVQVFRPLINNDLIVGAVGVLQFDVVVSRL
                     KTEYGVEAIYETVNVATARWVEGKDAKKFEEFKRKNEANLALDGGDNLTYIAPTMVNL
                     NLAQERYPDVQFFKTREH"
     gene            26162..27736
                     /locus_tag="PXF40_000470"
     CDS             26162..27736
                     /locus_tag="PXF40_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5801846.1"
                     /translation="MKKWLIPLTVAAFCVSACDDKNSTQATAEKPQVENTQSQKNAEI
                     LPLATVVAPWEINSLDPNQSGVIFQRMNLAETLVEADLNGNLIPALATDWRSNEEGTI
                     WRFTLREGVKFHNDQVLTAQAVVNSLNIAKSKPGVLAKAFIKEIRAVDNKVEIELTKA
                     FVPFPPFLTHYTALILAPESYNEKGEVTQIIGTGAFKPTKIEAPQKLEAVQFEGYWGK
                     KPQVQQANYLASSRSETRMLMAQSEPSSLVFNLDTASVARLKADPNLQLVSGSIARTI
                     QLKMDVAKPFFNDLAIRQALSQAINRKAIAEQVLKIENGAADQILPKAFADWRVDTAE
                     QVVDIAKIKQNLTASGYTFDEQGRLTKDGKPFSFTMRTFSDRPELPVIATILQAQWKQ
                     IGVEVNVSVGNFSEIPAGHQDGSLEMALYALNYGKTLDPYGVIASDFANGGSDWGVMN
                     WQNTEVDNAVKSLETERDPQKAKALKQTVSKIIYNDLPIIPVVYYQQNVVAHKEVKNV
                     TLDPFERRFFLELLSK"
     gene            27956..28888
                     /locus_tag="PXF40_000471"
     CDS             27956..28888
                     /locus_tag="PXF40_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5801847.1"
                     /translation="MHKILFRRLIQILLVIWSVGTLTFILTRQLSGDMAYRIAASRYG
                     YDQADSAAAEAVRAELGLDQPWWQSYFSWLSDLAQFNLGKSLVTGDPVWSEIQHQFGH
                     TLSLAIVALILAILIGPPLGLLAARKPNGFFDRLTLVFSTLFRSVPAFIIAIGLITLF
                     SAQLKWLPAGGYGCWQHFILPALTLAIGLSTVSVRVTRSAMVQVKGSEFYQFSQLKGL
                     SRWHTFLRHGLPNIAVPVIAYHAVQLVYLIEGVVVVESLFAWPGSGHALVHAIIARDV
                     PMIQGTTLVMGGLFVVLNTIADLLSAWIDPRIKR"
     gene            28898..29680
                     /locus_tag="PXF40_000472"
     CDS             28898..29680
                     /locus_tag="PXF40_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5801848.1"
                     /translation="MKISISQYLGGTILLAMLGFAFLQPYFYPMDIGFQDLTNILSNP
                     NEIAWFGTDHLGRDMLARLASAIRLSFGLSLFSVICALIAGLITGIMAGFFGGWIDRI
                     FSFICDLVMALPGLLLVLLFAALSPGSFWTLYLGISLVMWVEFFRVIRSISSTMANSS
                     EIQASRLMGMGWFYSFKRHLLPRLLPMIATLSAFSLGNAILALATLGFVSVGLRPPTA
                     ELGLMMTELFPYYYEAPLIFLQPVVAVFLMVLSLQLLSRKIK"
     gene            29769..31181
                     /locus_tag="PXF40_000473"
     CDS             29769..31181
                     /locus_tag="PXF40_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5801849.1"
                     /translation="MKLLDIQNLSVETENRLQLVEPISLQLKAGKNITILGETGSGKS
                     LLIQAIMGALPDGLIASGEISVKNCKISTESDRLQTLWGKTLVMLPQEPRRSLNPIMA
                     IGKQLWESFHYVAGKPSSQAKTESKAYLAKLGLGESVENYPHQLSGGMAQRASFAIAT
                     AAGGKILLADEPTKGLDPISKGKVIELLKSAYQNGGGLLTITHDIEVAEQLGGTILVM
                     KKGELLEQGEAKALLNNPQHPYTKALISADPKHWQPLQDLQNLSQKQPLVSVKNLSIA
                     RGKKTLFSNLSFDLHKGEVLGIVGHSGIGKSSLADVLCGLLKPKSGEVVWHSHSHKKH
                     QVLKLYQDPPEAFAPNVSLKTLLDDVINKHQLDRLPIPSLLQQLSLNPEILQRNAENV
                     SGGELQRVAILRALLLEPVLLFADEVTSRLDPITQQETIELLINQCRARNCSLILVSH
                     DPYLIEKSCDKVINLEEYVG"
     gene            complement(31268..32011)
                     /gene="rlmB"
                     /locus_tag="PXF40_000474"
     CDS             complement(31268..32011)
                     /gene="rlmB"
                     /locus_tag="PXF40_000474"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HDL5801850.1"
                     /translation="MSEQIYGIHAVKAFLDNAPERLIEVLVLKGREDKRLMPLLNELQ
                     RLGVAIQQVNRQTLDNKSQGEVHQGIIARVVPQKELNEHDLEAILSQKKNPLLLILDG
                     VTDPHNLGACLRTADAAGVDAVIVPKDKSAQLTPTARKVACGAAEVMPLIRVTNLART
                     MRDLQERHNVWIVGTAGEAESGIYEAKLTGSIALVMGAEGDGMRRLTREHCDQLISIP
                     MAGSVSSLNVSVATGVCLFEIVRQKLAGQ"
     gene            complement(32066..33433)
                     /gene="pssA"
                     /locus_tag="PXF40_000475"
     CDS             complement(32066..33433)
                     /gene="pssA"
                     /locus_tag="PXF40_000475"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HDL5801851.1"
                     /translation="MLILNKQRKAEYLLKSLPYLPQVAEQVQFLASSKAFKQQILQLI
                     QTAKKRIYITALYFEKDEAGQEVLAALYQAKRNNPELEINILVDWHRAQRGRIGEAEN
                     LSNADWYAKVKYEQGLPAGQEIAFYGVSINGREVFGVLHLKGFVFDDTILYSGASINN
                     VYLHQFERYRYDRYHVIENKVLADSWVTFIQQHLLTNEAVKRLDTENRPKTAEIRAQI
                     KHFRKQLSREAYLFNGVAENGRLAVSPLVGLGRRKNQLNKVIEALFYQTEQKLTICTP
                     YFNFPHSLRTRIEWLLANGKSVEIIVGDKTANDFYTKPDEKFTMASALPYLYEKNLRA
                     FAKRLDGYVQNKQLTIRLWKDGENSYHLKGVWVDNRYILLTGNNLNPRAWRLDAENAI
                     LISDPQHQLSEKAETELNQICQHTQILTHYSDLEVLTDYPENVRKLLKKFGRVKLDKI
                     VKMLL"
     gene            complement(33503..35050)
                     /locus_tag="PXF40_000476"
     CDS             complement(33503..35050)
                     /locus_tag="PXF40_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tannase/feruloyl esterase family alpha/beta
                     hydrolase"
                     /protein_id="HDL5801852.1"
                     /translation="MMKIIAFLFIFLSVFSHTALANSMAEQCVALKSNSPEKTAIYKA
                     EWVEKSAELPAYCLVQGEIGKRVEVDNVPYGIQFELRLPEQWNEKFLFQGAGGVGGVI
                     FPAIGKLYPHGASGANGLNRGYAVVSNDSGHATRDLVFTADPEARSNYAYASIGKVTT
                     VAKQLIAEFYRKPSKHNYIMGCSNGGREAMMAAMRYPQEFDGVIAGSPGFRVSRSVLA
                     EVWDNRALLAVAPKNGDGDKILSQALTQQDLDVIANGVLTRCDKLDGLADGLINAWEQ
                     CDFQPEMVAKQLGQKKVALIKTIFEGAKNSRGELIYSPWAYDSGINAKGWRDWKLGDS
                     QTAQPNSISFKMGLKSLTHYYLAPRVPSRDPLSVDLDQASEQVKAVGSIHDTDQVDLS
                     AFKQNGGKMLIYQGVSDPIFSAVDLKNWYQSLQQAVENPQHFAKLFFVSAMNHCGRGA
                     TVNDFDMLTALENWVEKGLEPESIAAKAGELYPNKAKQIPLCAYPKVAIYQTGEDPNR
                     LTSYQCR"
     gene            complement(35175..37991)
                     /gene="ileS"
                     /locus_tag="PXF40_000477"
     CDS             complement(35175..37991)
                     /gene="ileS"
                     /locus_tag="PXF40_000477"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HDL5801853.1"
                     /translation="MTIDYKNTLNLPETGFPMRGDLAKREPDMLKNWYDKNLYQKIRT
                     ASKGKKTFILHDGPPYANGNIHLGHAVNKILKDMILKSKTALGFDTPYVPGWDCHGLP
                     IELKVEGIVGKPNEKISAAEFRQACRDYAKEQVEGQKADFIRMGILGDWDNPYLTMNF
                     NTEANIIRTLGKVIANGHLYKGSKPVHWCLDCGSSLAEAEVEYEDKVSPSIYVRFNAV
                     DVNAVEEKFNAQGKGRGALSAVIWTTTPWTIPSNRAIAINPELDYALVQLGDERVLLA
                     VDLVEDVAKAAGVESAEILATTKGENLELLRFNHPFYDYSVPFIFGDHVTTDGGTGLV
                     HTAPDHGADDFVVARKYNIEMAGLISNDGKFKADTPFFAGLGVFESNDKVVEKLQEVG
                     ALLKLSRIKHSYPHCWRHKTPIIFRATPQWFIGMETQGLRQQALGEIKSVRWIPSWGE
                     ARIDTMVANRPDWCISRQRTWGVPMAMFVHNETEELHPRTLELIEEVAKRVEEKGIQA
                     WWDLDPAELLGEEAKDYRKVPDTLDVWFDSGSTYASVVEQRPEFNGNSADMYLEGSDQ
                     HRGWFMSSLMLSTATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNGAD
                     ILRLWVASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKSDLVQPQEM
                     IALDRWAVACALEAQNDIKEAYDNYQFHTVVQRLMRFCSIEMGSFYLDIIKDRQYTTK
                     ADSLARRSCQTALWHIAEALVRWIAPILSFTADEIWGYLPQVEGRSEFVFTEEFYTGL
                     FGLTEQDKLDDAYWQQILKVRAEVNRVLEQARKDKVIGAGLEAKVTVFANDEIRPLLE
                     QLGNELRFVLITSQAIVKPLAEADIAEGELAGLAVKVENADGEKCPRCWHYATDIGSH
                     SGHEEVCGRCVENVAGEGEKRLFA"
     gene            complement(38094..39056)
                     /gene="ribF"
                     /locus_tag="PXF40_000478"
     CDS             complement(38094..39056)
                     /gene="ribF"
                     /locus_tag="PXF40_000478"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HDL5801854.1"
                     /translation="MQLIRGFHNLDKHIALNQGCVLSIGNFDGVHLGHQNILARLCDR
                     ALDLGLPSVVMLFEPQPREFFAKKSGNSTACNPPARLMRLRDKLKYLEEAGVDFVLCV
                     RFSEKFAQISADDFISDLLAKRLKVRYLSVGDDFRFGAKRAGSFETLRNAGLKYRFAV
                     EESHTHSLNEERISSSLVREALQNNELDLAEKLLGKPYSILGRVAHGNKLGRTIGFPT
                     ANIMLNRLVTPIQGVFAVKVKTKQGSFNGIANVGNRPTINGTKPLLEVHIFDFNASIY
                     GEAIEVIFLKKLRNEIKFPDFEALKAQIEKDRLQAVEFFKEFAR"
BASE COUNT        11123 a         8986 c         7743 g        11257 t
ORIGIN      
        1 aaaagctgac aactgttata cttttcttgt ttttatatac agtattttta ttatgcaaga
       61 aattaaactt tttgaacaga aatctgtacg cagtcattac gatgaagaaa aagataaatg
      121 gtatttttct attattgatg tgattgctat tttaaccgaa agcctagatc cctctgctta
      181 ttggcgtaag ctaaaacaga ggctaaaggc agaaggcaat gaaaccgtga caaattgtca
      241 cgggttgaaa atgccctctg ctgacggaaa aatgcgtttg actgatgtag cagataccga
      301 acaacttttc cgacttattc aatctatccc tagtccgaaa gcagagccct tcaaacaatg
      361 gttagcaaaa gtaggttatg aacgcttaca ggaaataaac gatccaagtc aaagtctaga
      421 tcgagcaagg gagaattggc agaagatggg acgaagtgaa aaatggattc agcaaagaat
      481 gatgggacaa gaaacccgaa ataaactgac cgattattgg aaatcgtcag gggttgaaca
      541 gccacaagat tttgcatttt taaccaatgt gattcatcaa gaatggagcg gactatctgt
      601 acaaaagcat aaatcgctta aaggtttaaa aagccaaaat ctgcgagatc atatgagcga
      661 agctgaattg ttatttacag cacttgctga actttccagt cggcaaattg cagaaagtat
      721 gcaggcagtt ggggttgatg aaaatgccca agcaggaaaa caaggtggca atattgccaa
      781 aaatgcccgt caggaattgg agaataaaac aggtaaatca gttgttaccg gagagaattt
      841 tttacctcca gctaaaaatg aagaagaata gacacaatag atgttcttaa ttagtcaagg
      901 tcgagcctcc cccaaccttg accacaaact tgcaaaaaat agccaaaatc acaccgcttg
      961 caagttaaat agattgtgcc gctaccgcat tttggtagcc gaattgtcgc cacgcctcat
     1021 acacaaccac cgccaccgag ttagataaat tcatactgcg gctgtctttg cacatcggaa
     1081 tgcggatttt ttgcgacatc ggcatttccg ctaataatgg ctttggaatg cctctgcttt
     1141 ccggcccgaa cattaaaaaa tcgccaagtt catatttcac atcactgtgg ttctgctccc
     1201 ctctggtggt taaggcgaac aagcgtttag gcttagcacg ctcaaggaaa tcttcaaaat
     1261 ttttatattt ttgaatatcc acaaattcgt gataatccag ccccgaacgg cggagctttt
     1321 tatcgtccca accaaagccg aacggttcaa tcatatgcaa acgaaagcca cagttggcac
     1381 aaaggcggat aatatttccg ctgttttgcg gaatttcagg ttcgtataaa acaatatcta
     1441 acatttttta gccttactct ctccccttgt gggagagaga ccgaaaaata tttcgttcag
     1501 aaatattttt cagagagagg gggaaataac tctttcatca gtaacttctt accctctccc
     1561 tgatttttct tctgaacgaa gaaaaatcta tccctctccc acaagggtcg agggtattat
     1621 ctatacattc ttcacaatcc aacaattatg gatttgcgga ttgcgttcaa aatccaacgg
     1681 taaggtttta tgcgaaatat tttccgccgt taagcctaat gctgccaaac cgtcaaaatc
     1741 cattttaaag ccacgcttat tgttcgagaa cacaatggta ccatcagcgg ttaaaatacg
     1801 tttaagctgt ttcattaact caatatggtc tcgttgcacg tcccaactgt tttccattcg
     1861 ttttgagttg gagaaagtcg gcggatcgac aaaaatcagc tcaaatcgct cacggcattc
     1921 tgccagccat tgcaagcaat cggcttggaa caaacgatga tggcgaagtg ataaattatt
     1981 cagctctaaa ttttgctccg cccagttcaa ataggtgttc gacatatcca ctgtagtggt
     2041 cgattttgcc ccattaagag cagcgtgaac cgtagctgaa cccgtgtagg caaacagatt
     2101 caggaatgtt ttgccttttg ccatttcgcc caccatttta cgggttaagc gatggtctag
     2161 gaacaaaccc gtatccaagt aatcggttaa attcacccac agtttcgccc catactcgtt
     2221 cacatagaaa tactcgcctt tattggcaag tttttcgtac tgattcgtgc ctttttgttt
     2281 ttggcgaact ttcaacacta atttattagt ttcaacacct gtcacataaa gcgtagcaga
     2341 gactgcatct aacaagcgtt ggcgggcttt ttgctcatca atatttttcg gggcttggta
     2401 ttcctgcaca acaatgtggt cgccatatct gtccaccgct aaattatatt caggcagatc
     2461 ggcatcgtat aaacggtagg catcaatgcc ttgttgtttc gcccattttt cgatcttttt
     2521 gatatttttg gttaagcgat ttgcaaaatc cggagcgact tgagcattct gttcaaattg
     2581 taaattttca tctaaatctg accgcttgtt atgctcgctg atggagtaat ttttctgcac
     2641 acaatccaac ggaccgtttt tcgctttgaa ttgacgggct gaacgtaaac gcaggcaatt
     2701 taacaattca ggctcgccgc taaaaattga ggcattccaa ccggcaaatt gctgttttag
     2761 gcgttgcccg aacaccgaat aaagagcaat taacgccggc gttgtgccta aacgttcacc
     2821 ataagggggg ttacacacca ccgtgccgat tttttccgga atcggatttt ttaacgcagc
     2881 cacatcacct tgttgccatt gaatgagatg atctacccct gcatttttcg cattttgctt
     2941 tgctttagtc agcacacgat gatcgagatc aaaaccgaag aacatttttt gtagggacga
     3001 attgcaattc tcccctaccg cacccaattc aacatttcgg aatgcctcat ctaacacggc
     3061 tttccacatc gcttgttgat gccctttcca cgcattaaag ccccaatgtt tacggtgaag
     3121 ttgaggggca atattcgctg ccatttgtgc tgcttcaatc agtaacgtgc ctgaaccaca
     3181 catcggatca accaatggcg tgccgacttt ccagccggaa cgcaaaataa tggctgccgc
     3241 caatgtttca cgcaacggag ctttaccggt ttcttcccga tagccccgaa tatgtaaggc
     3301 atctccactt aaatcaagcg aaaccacaac attttcacga tccaaataaa catgaatgcg
     3361 aacatccgga ttatctttat ctactgttgg gcgggcaaaa cctttgcgtt caaagtaatc
     3421 cacaatgccg tctttcactc gcattgcccc aaattgggtg ttgcggattt ctcggttagt
     3481 gccgctgaaa tcaatgtaaa aggtatcacg gggatcgaat aaatccgccc agttaaatga
     3541 cacgatggaa gcatataaat cgctatcact aaaaattttg gtgctgatga gcggcagtaa
     3601 gatccgagag gctaaacggc tgtgtaataa tgcctgataa gccccttttt gcgtggtggt
     3661 aaaatgcaca ccgccttgag cgactttgca ttctgccgca caaatctgct ccagttcggt
     3721 ttttagtatt tcctcaaaac cacgggctgc cgtggcaaaa taggttgttt gatttgtcat
     3781 tcttttcaca cttgaaataa aaattggcag taattatagc cgaacaagcg gtctttttct
     3841 tgcaaagttt tgcaatttct tttttagtta aaaattagct aagatcaaaa aagcggcatt
     3901 tagtaaatcc ctaaacttgc tattttgaat taataattgc aaaattaacc gattaagaga
     3961 aaggaaagga gaaataaatg acagctccaa ctcaaatttt actcattgac gaccacccat
     4021 taatgcgtca gggaatgcgt caactattgg aattagatca ccaatttagt gtagtgggtg
     4081 aagcaagcaa cggcaccgac ggtatcaaac ttgcattacg acttgagccg gatgtgatta
     4141 ttctggattt aaatatgaaa gggctttcag ggctagatac tttacgctca ttgcgcgctc
     4201 aaggtataga tgccagaatc attgttttaa cagtgtcaga cgagcaatcc gatgtatttg
     4261 cattaatgga tgctggtgtg gacggctatt tattaaaaga taccgacacc ccggaactac
     4321 tagataatat ccgtaaagcg gctgccggtg aagtggtatt aagcgaaacc gttcgccaac
     4381 atttactcaa ccgccagcca gaaaatgatc ctttaagttg cttaacagat cgtgaactgg
     4441 atgttttaca atggctcgca accggtatgt cgaacaaaca aattgcggct cagctcttta
     4501 tttccgaaga aaccgtaaaa gtgcatatcc gcaatttact gcgtaaatta aacgtgcatt
     4561 cccgagttgc cgccaccgtg ctttatttgg aacagcaaaa aggctaattg aaatcggata
     4621 aaaaacgctg aataacttca cattattcag cgtttttgtt tattgtttgg attgaatgcc
     4681 ttaaaactaa ttcaggttca agcattatgg tttgaaaatc agtggattta aaacgaattc
     4741 gttttagcaa agtttccacc gcaagccgcc cgagttccgc tttgggctgg ctaatggtac
     4801 tcagcggtgg ggaaaggtat tttgccagtt caatatcgtc atagccgata atcgaaatat
     4861 cttgcggtat tcgtaaacct tgttgccaga ttgcttggta agcccctaga gcaatggtgt
     4921 cgctacaggc aaataccgct gtcggctttt cgctttgggc aagcaaagca ttcattccat
     4981 taaccccgcc ggcaaaatca aaatggcttt cgaacaccca gtttggattg agtggaatat
     5041 tcgcctcggc aagtgctttt ttgtagcctt ctaaacgatt ttttgccaat gattttttta
     5101 ggtttccagt aataatcgca atcttagaat gccctgcttc aattaaggtt tttgttgcga
     5161 gatagccgcc ggatattgaa ttttcaaaga ttttatctgc attgagctcg gtaaaccacc
     5221 agtctaacac caccaatggc agcggaatat tcaagctctc atcggcattc aatctggtat
     5281 cgccacacat cagtaacaag ccatctactt ttcgttgcat cagcatttgc aaatggtgtt
     5341 gcaaacgctc ggtgtcaccg ttggtagtgg caataatcag gttatattga tgttgctggc
     5401 aatattgctc cacccccgcc atcacctccg caaaaaacgg attgccggtt gccgttacca
     5461 gcattccgat ggttttagtt tcattcactt tgaggctacg agccaatgca gaaggcgtgt
     5521 aattcagttc tttcaccacc ctctgcactc tttcccgaat ttcctcgctg acaaatcggc
     5581 tattgttgat aacgtgagaa acggtcgagg tggaaacctg tgcaagccgt gcaatatcct
     5641 tcattgttgc catttgcaaa attttcctaa aaactcaccg cttgttggct tagaaaatcc
     5701 agtgtttcct gacgggtcgg aatagaaggt tgagcccctt tgcgagtcac actaatcgct
     5761 gccgctgcgt gagcaaaacg aatggcttga tccagcggtt tatcttctaa cattgcagtc
     5821 actaatgctc cgttaaaagt atcccctgcg gcagtggtat ccaccgcttg aacacggaag
     5881 cctgcaacga ttttgcctac accgttttcg cttacaaata ccccttttga gccaagtgta
     5941 atcaacactt tttcgatgcc cttttggtga aacacttgtg cggcttgaat cgcactggct
     6001 tcatcaacaa ctttcacacc ggttaatatt tccgcttccg tttcatttgg ggtaatcata
     6061 tccagtaagt ttaacagttc atcgggtaac gctcgagcag gcgcagggtt taatattact
     6121 ttcgtgccgt tttgctgagc caattttgct gcttgcacaa tcgccggcaa cggtgtttct
     6181 agctgcatta gcaaataatc cgcctgtgtg atttcggctg cacactttgc cacaaccgtt
     6241 tcatccaaat gaccgttcgc tccggctgaa atcacaatac tgttctcgcc cgattccgcc
     6301 acttgaatca ttgcaatgcc ggtcatttca ttcggaatcg ttttaatcga gcgagtgtca
     6361 atgccatctt gctcaaaggc tgatttcatt gctttgccga tgtcatcact gccaatacaa
     6421 ccgatgaaag aaaccttagc tcccaaacgt gctgccgcca ccgcctgatt tgccccttta
     6481 ccgccataag caatgtggca gctatgtccg gtgagcgttt cccccggttt ggcaaaatag
     6541 ggaacggaaa tcacgtgatc agcgttaatg ctaccgagaa cggtgagttt tttcatatta
     6601 agccctcaaa ttacctagta caacaaaact aggattctga tagcactagt ctctgacgag
     6661 tgctatttta ttaattcaaa gcgttcgtca gagacgaacg ctatcttcaa gtataattat
     6721 tttgaaataa cctttaaatc aaccggaatt tttgcttcca ctttttcgcc ttttagcact
     6781 ttatcggcag tttctacgcc taatgagcca atcagttcag gttgttgagc aatcgttgcg
     6841 gcaagtttac cgctttcaac ggcttttacg ccatcatctg tgccgtcaaa gcccacaatt
     6901 acaacctctt tcttcgctga actcactgca cgcaaagctc ctagtgccat ttcatcattt
     6961 tgagcaaaaa tagcttgtac gtcccctttg cttgagagca agttttcagt cacatttaag
     7021 cctttagtgc ggtcaaaatc agccggttga ctggctaata cattgaattt atgtgcttca
     7081 atcgcttgtt taaagccttc accacgttca cgagcggcgg aagtgccggc aatgccttct
     7141 aattgaatca ctttcgcccc tgagcctaat ttctgagcaa tgaaatctcc cgccattttg
     7201 ccgccggcaa cgttatcgga agcgatatgg ctaaccactt cgccttttgc tgcaccacgg
     7261 tcaagtgtaa taaccggaat tttgttgcga tttgcaatag ccaccgcatt tccgaccgct
     7321 tccgaatcgg ttgggttaat caataacact tttgccccac gcaccgttaa gtcttccaca
     7381 ttggaaagct ctttagccgg gtcattttgg gaatcaagca ccactaattt gtagcctaat
     7441 tcatctgctt ttttctgtgc accgtcttta aggctcacaa agaatgggtt atctaaagtc
     7501 gatactgcaa gagcgatagt ctcttttgcc gaagcagtgg ctgcaaccga taaacttaac
     7561 ataaccgctg atgcaatcgt agttaatttt ttcatagaaa tctcctttaa agatagatta
     7621 aactttttta gtgcctagat aattatcagc taatacagct gctaaaataa ccaacgcttt
     7681 agcaatcatc tgataatatg aagaaatatc caataaatta agggcattgt ttaagaaacc
     7741 gataattaat gccccgacaa gcgttcccat tacacgccct ttaccgccca ttagactggt
     7801 tccaccaaca actaccgctg caattgcgtc taactcatag gacacacctg ccgttggctg
     7861 agcagaagag agacgtgaag tcacaattaa gccggcaaga gcagataaaa aaccactcac
     7921 ggcaaatacg aagatcttaa ttttattcac attgatgcct gaaagctggg ttgccgattc
     7981 gttgccacct aaagcgtaaa tgtaacgccc aatcggggtg tgtttcaaaa tataccaagc
     8041 taacccaaac actaccgcca taatccaaat cggcacagga ataccaaata aatagcctgt
     8101 cccaataaac gcaaaggcgt ctgcttggtc agaaaagccg gtgctaatcg gtctgccatc
     8161 ggtataaacc atcgtaatcc cacgcaataa ggtcattgtg accaaagtcg caataaatgc
     8221 ctgcacttta cctttagcaa caatcgcccc actaatacca ccaaatgccg tccctaataa
     8281 taaaaccagc ggaatcacca acaaaatcgg caattcagaa ccgactaagg tcgctgcaac
     8341 cgcaccggtt aaggctaaaa ccgaaccgac cgataaatca atgcctgcaa ttaaaatcac
     8401 aaaggtcatt ccgaccgcaa taatcgcatt caccgaggtt tggcgtagaa tatttaaaat
     8461 attatccacg ctgaaaaaat cagggttaat cattgaaaca ctgacaatta aaataaataa
     8521 cgctacaaaa gaacgttgct cgattaaaaa tctgccaagt tgaaactgct ttgtttgagt
     8581 tgccataaac acaccttaat ttaatcctgt acttttgcca atagctgctg ccagtagctt
     8641 ttcttgtgtc gcttctgctc gtgaaaattc tgcactgatt tgcccttcgt gcatcactaa
     8701 aatgcggtcg ctcattccca acacttccgg catatcggac gaaaccatca aaatactaag
     8761 cccatctttt ttaaattcat taattaattg atagatctct tttttcgccc ccacatcaac
     8821 accccgtgtc ggctcgtcta aaatcagcac attcgggcgg gtcatcaacc ctttagcgat
     8881 cgccactttt tgctgattac caccggaaag cagcccgatt tgttgctccc gacttggggt
     8941 tttaatgtta aacatctcaa taaaatcatc gaccgccaat ttttctgcat cgtggcgaat
     9001 actgccggct ttggagaaat gatcgagaga ggtcaaagac atattttctt ttaccgacat
     9061 tcccaaaatc agaccatcgc ctttacgatc ttctgaaata tacacaatgc cgttattcaa
     9121 cccatcttgc ggacaatggt tggaaatcgc ttttccattt aactctatcg agccggctgt
     9181 tttcggcaat gcaccataaa gcaccttcat taattctgta cgccctgccc ccattaagcc
     9241 ggaaataccc acaatttcac ctttgtgtaa ttggaatgac acattattca ccccacttcc
     9301 acttaaattc ttcacttcaa gtaataactc gccacgctct tggtgtaaat gcggatattg
     9361 ctcttccaaa cggcgaccaa ccatcatttc aattaactga tcttcatcaa tatcggcaat
     9421 tactcgctcg ccgataaatt gcccgtctct tagcaccgtc acatcatcac aaatttcaaa
     9481 aatctctttt aaacgatggg aaatataaac aatgcctcga ttttccgctt ttaactctcg
     9541 aataacttta aacaacgatg ctgtttctgt atcggttaaa gcatcggtcg gttcgtccat
     9601 aataattact tgagactcaa aactcagggc tttcgcaatt tccaccattt gctgctcgcc
     9661 aatggataac tccgcacaaa gctgatggct actgtgtttt accccaagtc gggcaagcag
     9721 tttatccgcc tcggcataca tttttttcca atcaatagct ccccaagcgg ttttggactc
     9781 acggcccaaa aaaatatttt cagcaatggt taaattaccg actaaattca gctcttggtg
     9841 aataatgcta ataccggctt cttgtgaatc tttcgggcct ttaaaggtaa cttctttgcc
     9901 taaatagcta atagagccgg catctttgct ataaatcccc gtcaatactt tcatcaaggt
     9961 ggatttacct gccccatttt cgcccattaa tgccattact cgcccaccgt aaacagataa
    10021 gcacgcattg ctcaaggctt tcacgccggg aaattcttta tctatcccgc tcatttttaa
    10081 taaggtttcc atcattccac cctaaaacgg cacgcccgaa tataaaataa tattggcata
    10141 cggtgaacac tcacccgaac gcacaacagc tttactgtaa tgtgtctgct ctttaaagat
    10201 ttcgtggttc acataatcaa tttgaatttt attctgttga gtttgttcta attgggttaa
    10261 acgctccaaa agagctgcta acacttgcgg atttttatgt ttaatttctt cagcaagtag
    10321 cactcgttca acaaataatt cactaactac tacatcaaat gtttgtaaaa aacttggcac
    10381 accggcggtt aaagccaaat cgatccgctc tattgtgttt ggaatcggca aaccggcatc
    10441 gcaaaccgtt aaactatcgg tatgcccgag tgtcgcaata ctgtgcgaaa gttgtgcatt
    10501 tagatttagc gtttttttca tactaacccc tttattttcg ctccatcacg ttggaaaata
    10561 ctccatcgaa acgtttcgat ggcatcataa aaaattttct taatcggata aacaaccaaa
    10621 ttgcaaaaat gtgaagtagt tcaaattatt ttgctttata ataggtagca tttagtgaca
    10681 agcggtaaga tttgcaaatt tttttgcaaa atcgaccgct tgtttaattt ttattttctc
    10741 aatataaact atggctttat taattaccca caaatgtacc aactgtgata tgtgcttgcc
    10801 ggaatgcccg aacgaggcga tttcggtggg cgatgatatt tatatcatcg atccggtgtt
    10861 atgtaccgaa tgtgtcgggc attatgaaaa gccgacttgc cagaaagttt gcccgattac
    10921 caactgcatt atcaaagatc ctgataatat cgaaaccgaa gagcagttgt gggaacgttt
    10981 tgtgatgatt catcaccctg atcagatata aaaaaacggt cataccctga tgaccgttcg
    11041 ttttactcat tttctgccaa actataaggt aactcgacca tttccaacgc tacaccattg
    11101 gctctaaact tggtgttagg ttcaacatct ttattcagca ccacttgcac ccacagggta
    11161 ttttcatcag tcgcactggt caacacagtg ccggttgctc gccaattttc gcccagttgc
    11221 atttcaatcg cagaagcaac ttccggtaag ctgatttcgc tttcaaagtt gccggcaagg
    11281 gtaaataaag cacgtttatt cgccccacga tatttcgctc tcgctaccgt ttcttgcccg
    11341 atgtagcaac ctttggtgaa tgaaatcgca gattcaagtg cctgtaaatt ggttgcctgt
    11401 ggaatcagct caaactggtt ttgttgcaag agaacaggaa tgccgtcttg aatatccatt
    11461 aatgtccaga gctgttcatc ggcagtcgtt tcaagctctt cgccccaaac aatggcccga
    11521 ggctgtcctg tggttaaacg caaagcggtc atattttcgc ttaattttgc aaatgctgct
    11581 tcacctgcca taccataaag tggggtgtct aattccgtga aggtcacttt tgaaaaaacc
    11641 gcatattttt taagttgcgt cagggcttca ggcaataagc tgcggtgaat gatcgccata
    11701 aatttctcat tttctgcacg atacaaacgc agtaacgcac tcattttgcc tttcggatca
    11761 caatggctgg ttagcgtatg ttcgcccacc gaaatttttg ccacatcgca ggttaattgc
    11821 ccttgaagat atttctcagc atctacccct gcgatttcaa ttaaacaata ctgagaaagc
    11881 ggcacgcaga gatttggata gctctggctc acttgcttga aattcattgc cataatctgt
    11941 cctattctaa attctgaatt tgttcacgca tctgttcgat caacactttc agctccaccg
    12001 ccgaattggt cacgtccgca ttaatcgatt ttgaggcgag cgtgttggat tcacggttta
    12061 gttcttgcat cataaaatcc agtttacgcc caaccgcacc gccttttttc aggatattgg
    12121 tggtttcttt aacgtgtaat tgcaagcggt ctaattcctc cgccacatca acacgttggg
    12181 caagtaacac catttcttgt tctaagcgtt gtggatcaag ctgtaaattc agttcatcga
    12241 accgttgttg taaacgatct ttctgccatt gcagaatttc cggcatttgg gcttgtacct
    12301 ttgcagcctc aactgaaatt gcttctaaac gttgtaagat cagggcttgc acgttctcgc
    12361 cctctctggc tcgcattgcg ataaaatctg ccagaatttg ttcaaagccg gctaataaat
    12421 cttgagcaat ttggtctaaa tcttggcttt cattatccac cacgcccggg aaacgtagca
    12481 catcaacaag gttgatttcg ccttcatttg cggtttcttt taaccatttt aatgattgaa
    12541 ccacctgtgc ggcatattct ttgtttaacg caatttcact gttttgggtt ttgcttaaat
    12601 caatgcgtaa gctacactct actttgcctc gtgtcagtgc agaacgtaaa cgctcacgca
    12661 aggtcatttc taggttgcga aactgctccg gcaaacgaaa ataggtttct aaaaagcgtt
    12721 gatttaccga gcgaatttcc cacaccgcat tgccccactc ttttttcatt tctaaatggg
    12781 caaatgctgt catactataa atcattggta ttccttgtgt ttttataagt aaagctctct
    12841 ccccttgagg gagagagacc gaaaaatatt tcgttcagaa atatttttca gagagaggga
    12901 ggaatttgta aaatttgaga taaaaataac cgcttacccc tctccctgat ttttcttctg
    12961 aacgaagaaa aatccgtccc tctcccacaa ggggcgaggg ctatgtaaat tctttgctaa
    13021 agaaaaatca cattttactg tgttctttgc taaaatggta aaaattttag caaaaggaaa
    13081 agaaaatgcg tccaaataat cgagcaaaca accaagttag agaaattaaa attacccgta
    13141 actacactcg ctatgccgaa ggctcggtat taattgagtt tggcgaaacc aaagtattgt
    13201 gtaacgctac ggtagaagaa agcgtgccac gctttttaaa aggtcagcaa caaggttggg
    13261 ttaccgcaga atatggtatg ttgccacgag ccacccactc tcgcactcag cgtgaagcgg
    13321 caaaaggcaa acaaggcgga cgcacaatgg aaatccaacg cttgattgcc cgttctctgc
    13381 gtgcggtggt agatttaaaa gccttaggcg aacgtaccgt taccgtagat tgtgatgtta
    13441 ttcaagccga tggaggcact cgcaccgcct caattaccgg tgcgtgcgta gcattgtacg
    13501 atgcaatgaa taagttagta gctaatggaa cactaaaaac taacccaatg aaaggtttag
    13561 tcgcagcaat ttctgtcggt attgtagcag gcgaagcggt gtgcgattta gaatatctgg
    13621 aagattccaa cgctgaaact gatatgaacg tggtgatggt cgaagatggt cgtttagtgg
    13681 aagtacaagg cacggcagaa ggcgaaccgt tctcgcacca agaattactg acattgctag
    13741 atttagcgaa gcaaggcatt agccagctag ttgaagctca acgtaaagcg ttagctgaat
    13801 aattcacttc tctttttgat tttcttttta aataaaatct acatctgaca aaacagaata
    13861 accgttctga ttcagatgta gattttttta tttccctttt caaaatacac tcaatcataa
    13921 aataacaatt atttttttat ggaaatattg cacttcttac aaaatatctg taaatttcat
    13981 tgccattatt tttttatggc tatttattct agaaggactc taaacgtgtt aaagaaaaat
    14041 tatctcactg tatcaattct ccttgccatt agtggagtag gctacgctaa tgaaatctct
    14101 ttagagacta ttactgttga tggaaatacg ccttcaacca aagggaaatt actaggtggt
    14161 gaactaaata gcaatgaatc tgttgttgat gaaaaaaatt aaaacaaggt agtattacat
    14221 taggtaacgc tttatctggt gaattaggca ttcattcaag ccagttcgga ggcggtgcaa
    14281 gtaccccaat tattcgtggg caagagagta aacgtgcaaa aatcttacaa aataatggcg
    14341 aaaacttaga tatgtcggga atgtctcctg atcatgcagt aaccgtagat gcgctacttg
    14401 ctaaacgtat tgaaatttta cgtggtccaa ctactttact ttacagtgca ggtaatacgg
    14461 caggtgtaat taatgtggta gacaataaaa ttccaaccgc tattcccgaa aaaggctatg
    14521 aggggcaatt tggtgtgcgt tttggctcag ccagtaaaga gcgtttaacc tatgcaggct
    14581 caacctttgc ccttggaaat catttagcct tgcgggtaca gggaatgtat aacaaagctt
    14641 ccgaatacta tgctccacac tttacgattg aaggcaaacc ttaccaccgc gtaccagata
    14701 gcgatgtaca atcacaaacc ggcacagtaa gcctttcttg gattggagag cgaggacatc
    14761 ttggtattgc ttacactgat cgccgtgata aatatggatt aattggtcac acacacaaat
    14821 acgatcacta tactattagt attattcgcc aagccgttat gtttgcaaaa ggttatttac
    14881 gtttttatcc gcaccttgca gaagaaggag atattgacta taacaaccct ggtatccgtt
    14941 tactgcatac tcatattccg ggaggctcac attatggaca agatactcac gagcacggca
    15001 aaccttggat tgatatgcac tccaagcggt atgatattga tggaagtttg caaaatccac
    15061 ttcctggttt tgaagaagcc aaaatatcag ctaactatgt agattactat catgatgaaa
    15121 aagatggaaa aagagttgaa aattacttca agaacaaagg aaaaaatcta cgtttcgaat
    15181 tggttcacaa agagtggaaa gggctaaaag gagctattgg tgtgcaatat accaaccaat
    15241 ctacctcagc acttgcactt gaagcttcac gagctgcaaa agtatttaat aaacagcctt
    15301 tactcaataa tccaaaaaca aaattatgga gtctctttgc gattgaacgc cttaatttag
    15361 gtgactttac ctttgagtta agtgggcggg cagaacgtca aaaaatagca atggattatg
    15421 atgtgaaatt aattgatcgc tggctaggct ttaatacacc tatgccaaac ttggacccac
    15481 ataaagacaa aggttattct tatagctttg caactcattg gtatttcgca ccaaaccata
    15541 agttaacatt aaatgctgca catcaagaac gtttacctaa tgctcaggaa ctctatgctc
    15601 atggtaaaca cattgcttta aatgcatttg aggctggcaa taaaaatcta aaaaaagagc
    15661 gttctaacca aattgagcta tcattagctt atgttggcga caaatgggat tataaattaa
    15721 atctctacca cacccgctat ggcaactata tttacccatt aactcttaat gataatcgtg
    15781 gacctaaatc ttttaccgat gaatataact tgaaagtgaa tagatattat caaggcgaag
    15841 ctcgttttag tggggcagaa ggcgaaattg gttatctatt tacaccaaat tatcgcttag
    15901 ccgtattcgg agactatgtc cgtggaaagt tagtcaactt acctaatatt gcaatgagtt
    15961 acaacatttg gacaggtgaa gttgacaaat gggcttctca gccagacatt tctgcacctc
    16021 gtataccacc actacgttta ggagcaagat ttaatgctga cttcaaccta aactggtctg
    16081 gaatgttaga atattaccga gtatttgctc agaaaaaagt ctcgaaatac gaacaagtta
    16141 cccctggcca tcatcaagta aaccttggcg taacctatag taatcatttt aatcaaacag
    16201 aataccaagt attccttaaa gtggataact tgcttaatca gaaaatgtac caacatgcct
    16261 catatctacc acatattcca caaatgggta gaaatgcaat gcttggaatg aatatcagtt
    16321 tttaatttgt aaatctctac aaaaatataa ccgcttgtaa atttctatct acaagcggtt
    16381 actttcagtg gattttttgc aattagagat cgtcaattac caagtaaatt ttatttaccg
    16441 ggccgtgaac gccaactact ttaatcaact caatatccgc agtcgccgat gggcctgaga
    16501 tgatattcac acaagatggc attctttcac ctcgttgggc tttttcgtgc agaatttgtg
    16561 caagctgtgc cacacgaggt aacactgtac ttttgcgtaa cacaaccacc gatttttcgg
    16621 gcaataagct cactgaacgc ccaaattctt tatcggaaaa cagtacaata ccgccagact
    16681 ctgccaagcc atattcaccg taaaccacac cgatattagc agttctggct ttttcaaagt
    16741 tggtttcagc ttggttgaaa tcccacacat agctgtcttc gtattttgct tgaatggctg
    16801 cggtaatccc aagatccttt aaacgttgat cgttattcac gatcacactc gccccgccat
    16861 atttttcaca aatatcaata atggcttgtg gtaaatccgc ctcttttgcc tctactacat
    16921 ctgccatcat cactcgggca aaatcgataa actcttggca aagttgtggt tgagggcgat
    16981 cggttaaacg ggtaatcgcg tggttgtttt ccaacacagg aattggctca ggcacatttt
    17041 ggcgtggtct gcccatacgc tgtgccaatt tatttaagaa attttcacga ttttgtaaat
    17101 ccattttctt atcctctgtt attaaaccat tcacggaaac tttcgccttc ggcagtcggt
    17161 aaatcacggg ctttcgtcca ttcacctaac gccccaaaat tcaccggtgc tttgccgttt
    17221 ttaatcaatt tgcttgccac tttcgccccc acttttacgc cgactttcca aagggttggg
    17281 tgtgagttag cgaagttaaa gccaaaaata gacaagcgtt ctgccattgg cgttaagccg
    17341 gcatccgcaa ttttctcacg gtgttttaag ataagctgtg ccagtggaat tttcactgga
    17401 caaacactgt tacaagcggt acaaagtgag caagcatacg gcaattcttt aaactcttcg
    17461 tagccaccga gcaatggcga aataactgaa ccaatcgggc ccggatagat tgaaccatag
    17521 ccgtgaccgc caatttggcg atacgccggg caagtgttca aacatgcacc acagcggata
    17581 caacgcaaca cttcttggaa ttcgctttct aagattttag aacgaccgtt atcgacaatg
    17641 accaagtgga actcttccgg accatcggtt tcgccttcaa gtctaggacc tgtcagccaa
    17701 gtgttgtaag cggtgagttt tgcccctacc gcactgcgag ccagcatggt aattaataca
    17761 tcaacctctt taaaggttgg ggcgatacgt tccataccca ttactgcaat atgcgttttc
    17821 ggcacagttg ttgccatacg cagattacct tcgttggtca ctaaacaaac cgagccggtt
    17881 tccggcaccg caaagttaca gcctgaaata ccgatgtctg cctctaagaa atcttcacgg
    17941 attttttggc ggacgaatgc agtcatctct tcaggtgttt ccgaaccttg ataacctagc
    18001 acatcgtgca tttcttggcg gattctgtgg cgatctttgt ggattgcagg tacaacaata
    18061 tgagaaggtt tatcgcccac aatttgcaat aaatattcgc ccaaatcggt ttcaaccact
    18121 ttaatgcctt ctgcttctaa aacgtggttc atcccaatct cttcggttac catcgacttc
    18181 gattttacga ttttcttcgc atttttagct ttcgccacgt ttttgatgta atcagtggct
    18241 tcttcggcgg tttcggcaaa gaaaacgtgt ccgccgtttt gggtgacttt ttcgcttaat
    18301 tggtagagat aagcgtctaa attggctaaa acgtggttac gaattgcttt cgcatcatca
    18361 cgccactctt cccagttgcc cagctcatcc accatacgct gacggtttgc accgattgtt
    18421 tcctgagcct taactaaggc tttacgcaca atctcgttat taacttgctg ctcaacacgt
    18481 tgtttaaacg gcagggtgtt agtttgtaaa taagacatct tattttcctc cctgcattaa
    18541 cacttcggca atgtgcatca ctttgattgg cttaccttca cggcttaaac gaccgccaat
    18601 gttcatcaag cagcttacat ctgccccgat taaataatcc ggctcatcgg tatctacatt
    18661 tgcgactttc tcttttacca tctcgccgga aatttctgcc attttgaccg agaatgtgcc
    18721 accaaaacca cagcaagttt cttggttttt gattggtaat aactctaacc ctttaacgtg
    18781 ctgtaataaa gcaataggct catctttaat ccccagctta cggaataagc tgcaagacgg
    18841 gtgataaact gctttgcccg gtaaataagc cccaacatct ttcacgccca gtttgttcac
    18901 aataaaatcg gttaaatcat agaaacgatc agccactttc ttcgcacgtt ctgcccattc
    18961 tttttcgcca aagcgttcaa aatgatccgg ataggttttg atcgcatata cacaagaacc
    19021 tgccggggcg acaatcgggt aatcattagc ttcaaaggtt tcaaccaagt ttttcatacc
    19081 tgctaaagct tgcttagtgt aaccgctgtt gatcgcaggt tgtccacagc aaccttgttt
    19141 ttctaagaaa gtgattttac aacctaattt ttccaataaa agcacagtat tttttgcaac
    19201 ccctgctttc attacatctg caatgcaggt tacgtaaaaa ttaacgttca taaagaactc
    19261 ccacagtaaa tataaataag aattaaactc aaaaaatgcc gttctaagac ggcgaaagga
    19321 agaggtggat ttgcaaaaaa tttgctaaat ctcaccgctt cctttctaaa tcaagtaagc
    19381 tgattattaa ctcattatag gttatagaac ataggtacta taaacaatgc cgaaatcgca
    19441 gcaataacgc catacacgaa cattggcacg gctgttttct taataatatt gccttcttgt
    19501 ttctcaatgc cggtaacaga acacacagcc acgatgttgt taatacacac catattcccc
    19561 attgcaccac caactgattg caatgcaaga attaaggtaa cagataaccc gacttgctgt
    19621 gccgttgcat attgtactgt tccgaaggtt aagttagata ccgtatttga ccctgagaag
    19681 aacgcaccaa ttgcacctaa gaacgaggca aataatgtcc aagattgacc ggtaaattct
    19741 gcgaagtttt taccaatgat ctgaaccatt gagtctacac caccaattaa cattaatttt
    19801 accatcacaa tggcacctaa aagtgctaag aatggttttt tcacttgttt aaatgaagtg
    19861 ccaaaaatct cttgagtatt tttacctgat accgagaaaa tcggtaagca aattaatacg
    19921 gtcacaacaa atggaatcaa cgcaggaaca tacagtaatt tatagctagt tgctacattc
    19981 gtacctaaaa tatttttcag tgcaaaaatt aagccttggc taatttcaaa gttagcgaaa
    20041 ccaagcgaac tgacaatcca agctgttgca tcatttagca ttgcttttaa tggaagttgc
    20101 tgaatacggg tgattaccaa aatgaagatc agtaaccctg ttggtaataa tgcttttgcc
    20161 acttcaccaa aggtcgcttt atcgccgtca aggtggttct cgcttttcgc taaaccaata
    20221 cccatatttg ctacccagac tgacaccaat aaaccaatcg ccccggcaac taatgatggg
    20281 aattcgtagt taaattgagc aataatgaag taaggaatga cacaggcaaa aatgctgata
    20341 taaataaaca cgatattttg acgaatttct ttccagctca caattaaacg caatgccata
    20401 actggaataa taaacgcagc aatagagtgg atcagtgcag taatagaacc aatttcaagc
    20461 acttgtgcat cggttagtaa accatctttt aataatggtc ccataccaaa ccaagttggt
    20521 gtgccaaccg caccaaatga caccggcaca gagttcatta ctaaggctaa cattgccact
    20581 tgtaacggtt taaagcctaa accaaccaga attggagctg caattgccgc cggcgtaccg
    20641 aaacctgatg cgccttcaat cataaatgca aatgcccaac cgataatcat caactgtgcc
    20701 accggattcg ggttaattgt ccctaaccat ttacgcatag tgttggttgc acctgaaact
    20761 tcagagaaac ggttaaataa aatcgccccg aaaataacgg taattggggt taatacatca
    20821 cctaaaccgg caataatatt ggcaaagatt aacgtggtat cattaccaaa ataggtaagc
    20881 tgaagcacaa aaattaataa cgccgtaagt ggtaaagcca cataagacgg taacgcgtta
    20941 cgttttacca ttaaataaat gagcaaaaca attggaaata cgctcaggaa tagagccata
    21001 ctgcacctct ttatatgatt ataaaatgac ctaactggtc ggataggtgc gaattgtact
    21061 cttaaaaaaa actaatgtaa ctaggttgtt acaattttgt gatctagctc gcatttttaa
    21121 tgattgtatg gttaaaaaag agccatattt attttcattt aatacttaat agttagccct
    21181 atttaagaca tttttaccga atcgagcaat atgcaattaa ttaacaaaaa aaggccgctt
    21241 gtagatcaca gatcaacaag cggtcttttt taggcaaaaa tttgcaaatt aaacattgaa
    21301 acggaagtgc attacatcgc cgtcttgaac aatataatct ttaccttcca aacgccattt
    21361 acccgcttct tttgcaccgg cttcaccttt attgtctatg aagtcttggt aagcaattac
    21421 ttccgcacga ataaagcctt tctcaaagtc agtgtgaatc acggctgctg cttttggagc
    21481 ggttgcacct accgaaaccg tccacgcacg cacttctttt acccctgcgg taaagtaggt
    21541 ttgtaagtta agtaaacggt agcctgcacg aataacacgg tttaagcccg gctcttcaat
    21601 gcctaaatct tgtagaaatt ccactttttc ttcgtcatca agctcggcaa tttccgattc
    21661 aatcgctgca cacaccggta caaccaccgc cccttctttt tcggcaattt cacgcacacg
    21721 gtcaagataa gggttatttt caaaaccgtc ttcgttcacg ttggcaatat acattgtcgg
    21781 ttttaaagtt aagaagttgt agcccttaat agcgtgcagt tcatccttat ctaaatctac
    21841 cgaacgaatc ataccggcat tttcaagcac aggtaggatt ttttccataa tcgataattc
    21901 aaattttgcg tctttatcgc cacctttcgc acgtttttgt aaacgctgaa tggcacgctc
    21961 gcaactgtct aaatcggcaa gtgccaattc ggtattgatg atttcaatat catcagctgg
    22021 gtcaattttc cccgcaacgt gaacgatgtc atcattttca aaacaacgca caacgtggcc
    22081 aatcgcatca gtttcacgaa tattggctaa gaatttatta cctaaacctt cgcctttgct
    22141 tgcacctgcc actaagccgg caatatccac aaattccatt gtagttggta acactcgctc
    22201 aggtttcaca atttccgcca acgcatctaa gcgagggtca ggcattggta ccacaccggt
    22261 atttggctca atcgtacaga acggatagtt tgctgcctca atacctgctt tagttaatgc
    22321 attgaaaagg gtcgatttac cgacatttgg taaacccaca ataccacatt taaatcccat
    22381 tttttgttcc ttagaattcc cctctcccct tgcgggagag ggataaattt gagcttcgtt
    22441 cagaagcgaa aatgagggag agggcgaaat tgcaataatt tcctcaaata tgaccgctcc
    22501 cctctctctg aaaaatactt ctgaacgaag tatttttcgg tctctctccc acaagggaga
    22561 gagttttaat ttgctttaaa actatttaaa cggttagttg ccttaaccat tccgtcttta
    22621 aataaaactt ctacgcaacg tgcggcttca tcaaccgcac tattcagtaa tgtctgatcg
    22681 cttggtgaag gcttgcccag cacataattc gccactaagt ctttatgccc cgggtgtcca
    22741 ataccaattc gcacacggta aaactcttta ttattgccaa gggcggcaat aatatctttc
    22801 aagccgttat gaccaccgtg tccgccgcct tttttcaatt tcaccgaacc gggtggtaaa
    22861 tccaattcat cgtgagcgac caaaatttct tccggtttaa tccgataaaa attggctaac
    22921 gctcccactg ctttaccact taaattcata aaagtagtcg gcactaataa acggacttcg
    22981 ccttgagcgg tattaatttt tgctactttg ccaaaatatt tcggctcttc ttttaggcta
    23041 acgttatata ttcgggcaag ttcgttaatc agccactcgc ctgcattatg gcgggtttct
    23101 tcatatttta cccccgggtt cgccagcccg acaattaatt taatttctga cacaatcttg
    23161 tctcaattca tttaatttaa aaggcagtat tttagagaaa aaccgctatt ttctcaaggc
    23221 aaccattaat catattgtct atacggattt ggtacgcatt gatacttcgc taacatcgat
    23281 tcagtgaaat cggtgcgtga agcagcgtta tcattgttta aactaaccac accaattcgc
    23341 ttgcctctgc aatccccttt agcaataaag gcaagattat aacccgcctc acgggtataa
    23401 cctgtcttac tcactaatgc ctgataggat tgggaacgaa ccatactgtt ggtgtttttc
    23461 atagagaaat aacgaccacc tgcataaaca ctcactaatg gcgaattaga caattgctga
    23521 atttcaggct tacttgccgc atagcctgcc aatttagcaa gatcaaccac cgttgaaaca
    23581 ttatccgaag ataagcctga gctatcacca aagtaggttt gagtcatacc gatttcacgg
    23641 gctttgctgt tcattcgagc caaaaattgg gctttattca aatgtgttgc gtgggcaagg
    23701 gcgtgagcgg catagttatc ggagcgaact agcatcgctt ttaacaattc actacaggca
    23761 atgttaagat ttttcggcaa tgggctggtc gtgcctttta agaaatcagc atctgacggc
    23821 aaaatttggg tttggcaact cgccccatag cggttttctt ctaagaaaac gactgctgtc
    23881 attaattttg tgaccgaagc aatcgggcga actaaattga aattcttacc ttccaaaaat
    23941 ttcttttggt ttaagtcaaa caccacataa gcggaatttt cggttggaat ataagcagcg
    24001 gttgctttaa tccgtggtgt gcttttcctt tttgccggct gggaggaaca ggcgcttaac
    24061 accagagccg caatcataac aggaataaat tttttcatca taatagattc atcgataata
    24121 aagtcaaagc tggttattct accctgtttc caaaattgtg ccaaagcaag cggtcgattt
    24181 ttacaaaatt tttgcaaatc tagccgattt tgcaaaattt ccgccaaatt taaccgcttg
    24241 ccctctcgcc tcaaatcagc gaaaataacg cttaattttt tggcggactt tccgcccttt
    24301 ttattttaat tggttgagaa aaatgtcata cccacaagaa gttaataaac gtcgcacctt
    24361 tgcgattatt tcccaccccg atgcgggtaa aaccaccatt accgaaaaag tattgctcta
    24421 cggaaatgca atccaaactg ccggctcggt aaaaggcaaa ggctcggcac aacacgctaa
    24481 atccgactgg atggagatgg aaaaacaacg tggaatttcg attaccacct ccgtgatgca
    24541 gttcccgtac aatgattgct tggtaaactt actcgataca ccggggcacg aagacttctc
    24601 ggaagatact tatcgtactt tgactgcggt agatagctgc ttaatggtta tcgactcggc
    24661 aaaaggggtt gaggaacgca ccattaaatt aatggaagtg acccgcttgc gtgatacgcc
    24721 aatcctaacc tttatgaaca agctagaccg tgatattcgt gacccgatgg agctgttaga
    24781 tgaagtggaa agcgtgctga aaatcaaatg tgcgccgatc acttggccga ttggttgcgg
    24841 aaaattgttt aaaggggtat atcaccttta caaggacgaa acctacttat accaaaccgg
    24901 acaaggtcat accattcaag aagtacgagt ggttaaaggc ttaaataatc cggaactgga
    24961 tcaagccgtt ggcgatgatt tagcccagca gttgcgtgat gaattagagc tggtacaagg
    25021 cgcttcgcac gaattcgatc acaccgaatt tatcaaaggc gagctgacac cggttttctt
    25081 tggcactgca ctgggtaact tcggggtcaa tcatttcctt gacggtttaa ccgaatgggc
    25141 accggcacca caagcccgtc aatcggacga acgtgaagtt tcaccaagcg aggaaaaatt
    25201 cagcggtttc gtatttaaaa ttcaagcgaa tatggatccg aaacaccgag atcgagttgc
    25261 ttttatgcgt gtcgtttcag gtaaatatga aaaaggaatg aagcttaaac acgtccgtat
    25321 cggcaaagat gtggtgatct ccgatgcctt aacctttatg gcgggcgacc gttcacaagc
    25381 cgaagaagcc tacgccggcg atattatcgg cttgcacaat cacggcacga tccaaattgg
    25441 tgatactttc acccaaggcg aaaatttcaa attcaccggt attccgaact tcgcccctga
    25501 gctgttccgc cgaatccgcc tgcgtgatcc gctcaaacag aaacaactgc tcaaaggctt
    25561 ggtacaactt tccgaagagg gtgcggtgca agtattccgt ccgttaatca acaacgattt
    25621 gatcgtggga gcggttgggg tgctacagtt tgatgtggtg gtttcacggc tgaaaaccga
    25681 atacggtgta gaggcaattt atgaaaccgt aaacgttgcc acagcccgtt gggtcgaagg
    25741 caaagatgcc aaaaaatttg aagagttcaa acgcaaaaac gaggcaaacc ttgccctaga
    25801 cggcggagac aacctcacct acattgctcc gacaatggtg aacttaaacc tcgcccaaga
    25861 acgttaccct gacgtacagt tctttaaaac gagagagcac taaaaccaat aggggcgaaa
    25921 aatctttcgc ccctacaaat aaagcacaag cggtcaattt tttttccgaa ttttacaata
    25981 ctaggcattc tgttcctcaa atagcctaaa tattccccta tcaacaatcc ttatcttgag
    26041 attattctgc ctattaatta accactcaaa aataccctcg cagaaaactc tacttttttt
    26101 atggaaatat gctaaagttc gccaatattc atagccctga tttttttatg gagaaaataa
    26161 aatgaaaaaa tggttgattc cattaactgt cgcagcgttc tgtgtttctg cttgcgatga
    26221 taagaacagc actcaagcaa ccgcagaaaa accgcaagta gagaatactc aatcgcaaaa
    26281 aaatgcggaa atattaccgc ttgcaaccgt ggttgcccca tgggaaatca atagccttga
    26341 cccgaatcaa tcaggcgtaa ttttccagcg tatgaactta gcggaaacat tggtcgaagc
    26401 cgatcttaac gggaatttaa ttccggcatt ggccactgac tggcgcagta acgaagaggg
    26461 aacaatctgg cgttttacct tgcgtgaagg ggtaaaattc cataacgatc aagtacttac
    26521 cgcacaagca gtggtaaata gtttgaatat cgcaaaaagc aaaccgggtg tgttagcaaa
    26581 agcctttatc aaggaaattc gagcggtaga taacaaagtg gaaattgagc taactaaagc
    26641 ttttgtgccg tttcctccct ttttaacaca ctacaccgcc ttaattttgg cacctgaaag
    26701 ctataatgaa aaaggcgaag tgacccaaat tatcggtaca ggtgcgttta aacccacaaa
    26761 aattgaagct ccgcagaaat tggaagcggt gcaatttgag ggctattggg gcaaaaaacc
    26821 gcaagttcag caagccaatt atttagccag cagccgtagc gaaacccgta tgttaatggc
    26881 acaaagcgag ccgtcatcac tggtatttaa tttagatacc gccagtgtag caaggctgaa
    26941 agccgatcct aacctgcaat tagtcagcgg atctattgcc cgtactattc agttgaaaat
    27001 ggacgtggca aagccgtttt ttaacgactt agcgattcgc caagccttat cgcaagcgat
    27061 taatcgcaag gcgattgctg agcaggtctt aaaaattgag aacggagctg ccgatcaaat
    27121 tttaccgaaa gcctttgccg actggcgtgt tgataccgca gaacaagtgg tcgatattgc
    27181 aaaaattaaa caaaatctga ccgcttccgg ctataccttt gatgaacaag gtcgcttaac
    27241 caaagacggc aaaccgttta gctttaccat gcgcaccttc tcagatcgtc ctgaattacc
    27301 ggtgattgct actatcttac aagctcaatg gaaacaaatt ggcgtggaag tgaatgtttc
    27361 ggtgggtaat ttcagcgaaa ttccggcggg gcatcaagac ggcagtttag aaatggctct
    27421 ttatgcctta aattatggca aaaccttaga tccatatggc gtaattgcct ccgacttcgc
    27481 caatggtggc agtgattggg gggtaatgaa ttggcaaaat actgaggtag acaatgcagt
    27541 caaatcgctc gaaaccgagc gtgacccgca aaaagcgaaa gcattaaagc aaacggttag
    27601 caaaattatt tacaatgatt tgccaatcat tccggtggtt tattaccaac aaaatgtggt
    27661 ggcacataaa gaagtaaaaa atgtgacgct agatccattt gaaagacgct tctttttgga
    27721 gttattaagt aagtagttta attcaaaata ctcctcgctt tagaaaaggg aaggtaggat
    27781 ttttcagtag taatttgcgc tcttaggtga ataaatagtg acagaattat cgttttttct
    27841 catttttcac ctattttctc cgcttatttc ttctgccaaa tcttcccttc ccctctttgc
    27901 taaagagggg gatcagaacg cataaaatca tctttttaat aaatgaaata atacaatgca
    27961 caaaattctc ttccgccgtc ttatccaaat tctactggtg atttggtcgg ttggcacact
    28021 cacatttatc ctcacccgcc aactttcggg tgatatggca taccgcattg ctgccagccg
    28081 ctatggttat gatcaagcag atagtgctgc tgctgaggct gtgcgtgccg agctgggatt
    28141 agaccaacct tggtggcaaa gctacttcag ctggctaagt gacttggctc aatttaattt
    28201 aggcaaatca ttggtgaccg gtgatccggt ctggtctgaa attcagcacc aattcgggca
    28261 taccttaagc cttgcgattg tggcacttat cttagcaatc cttatcgggc ctccgctcgg
    28321 tttgttagcc gcccgtaagc caaacggctt ttttgaccgc ttgacactgg tattcagtac
    28381 cctgtttcgc tccgtgccgg catttattat tgcgattggc ttgattacgc tgttttccgc
    28441 tcaactaaaa tggctacctg ccggcggata cggctgttgg caacatttta tcttgcctgc
    28501 cttaacgctt gcgattggct tgagtacggt ttcggtacga gtcacccgtt ctgcaatggt
    28561 tcaggtaaaa ggctcagaat tttaccaatt ttcacaatta aaaggcttaa gccgttggca
    28621 taccttttta cgtcacggtt tgccgaatat tgccgtgccg gtcattgcct accacgcagt
    28681 acaattagtt tatttaattg aaggcgttgt ggtggtcgaa agcctatttg cttggcccgg
    28741 cagcggacac gcactggttc acgccatcat tgcccgtgat gtgccgatga ttcaaggtac
    28801 aacgctcgtg atgggcggat tgtttgttgt attaaacacc attgccgatc tattaagtgc
    28861 ttggattgac ccacgaatta agcgatagga catcaagatg aaaatttcaa tttcacaata
    28921 tttaggcggc actattctcc ttgcaatgtt gggatttgcc tttttacagc cttattttta
    28981 cccgatggat attggctttc aagatttaac caatatcctt tccaatccaa atgaaatcgc
    29041 ttggttcggc accgatcatc tcgggcggga tatgcttgcc cgtcttgcct ctgctattcg
    29101 tctttcgttt ggcttatcac tgtttagcgt gatttgtgcc ttaattgcag gcttaattac
    29161 cggcattatg gcaggctttt tcggtggctg gattgaccgc attttcagct ttatttgtga
    29221 tctagtgatg gcactccccg gcttactttt agtattgctc tttgccgccc tttctcccgg
    29281 ctcattttgg acgctctatt tagggatttc attggtaatg tgggtggaat ttttccgtgt
    29341 gatccgctct atcagttcaa caatggcaaa cagctcggaa attcaagcct cacgcctaat
    29401 gggaatgggc tggttttata gcttcaaacg ccacttattg ccccgtttat taccgatgat
    29461 tgccacttta tcggcattct cgctcggcaa tgcgatttta gctctcgcca cacttggctt
    29521 tgtcagcgta gggcttcgcc cgcctacagc agaattaggc ttgatgatga ccgaactatt
    29581 cccttactac tacgaagcac cgctgatatt tttgcaacca gtggttgccg ttttcttaat
    29641 ggtactcagc ttacaattat tgtctagaaa aattaaataa tgcgtagggg caggtcctgt
    29701 gcctgcccaa aattcttatt atatttatgg gcgggcacag ggcccgcccc tacagtaata
    29761 aaatgaagat gaaattactc gatatccaaa acctatctgt tgaaaccgaa aacagattac
    29821 agctggtcga accgattagc ctacaattaa aggcaggaaa aaatattact atcttaggcg
    29881 aaaccggctc aggcaaaagc ctgctgattc aagcgattat gggggcgtta cccgacggct
    29941 taatcgcaag cggtgaaatt tcggtaaaaa attgcaaaat ttccaccgaa tccgaccgct
    30001 tgcaaacatt gtggggtaaa accttggtaa tgctgccaca agagcctcgc cgctcgctta
    30061 atccgattat ggcaatcggc aagcagttgt gggaaagttt tcactatgtg gcaggcaaac
    30121 catcatctca agccaaaacg gaaagcaaag cctatttagc caaacttggg ctgggcgaat
    30181 cggttgaaaa ctacccacac cagctttccg gtggaatggc tcaacgtgcc tcttttgcga
    30241 ttgcaactgc cgccggtggc aaaattttac ttgccgatga gccgaccaaa gggcttgacc
    30301 caatcagtaa aggcaaagtg attgaactgt taaaatccgc ctaccaaaac ggtggaggct
    30361 tgctcaccat tactcacgat attgaagttg ccgagcaact cggtggcact attttagtga
    30421 tgaaaaaagg cgaactgttg gagcaaggtg aggcaaaagc gttgttaaat aacccacaac
    30481 acccttacac caaagcactt atcagtgccg atccaaaaca ttggcaacca ttgcaagatc
    30541 tgcaaaattt aagccaaaaa caaccgcttg tttcggttaa aaatttgagt attgcccgtg
    30601 gtaagaaaac gctgtttagc aacctttcct ttgacttaca caaaggcgaa gtgcttggga
    30661 ttgtcgggca tagtgggatt ggcaaaagct cgcttgccga tgtactttgt ggtttgctta
    30721 agccgaaatc gggcgaggtt gtgtggcaca gccacagcca taaaaaacac caagtgttga
    30781 agctttacca agacccaccg gaagcctttg ctccgaatgt cagtctaaaa accttgcttg
    30841 atgatgtgat taacaagcac caattagatc gactgccgat tccaagttta ctgcaacaac
    30901 tttcgctcaa cccagaaatt ttgcaacgca atgcggaaaa tgtctccggc ggcgagctac
    30961 aacgagtagc aattttgcga gccttgctct tagaaccggt actactgttt gccgatgaag
    31021 tcacttctcg gcttgaccca atcacacaac aagaaacgat agaattgctg atcaaccagt
    31081 gccgagcgag aaattgcagt ctgattttgg tcagtcacga tccttatcta attgagaaat
    31141 cgtgcgataa agtgattaat ttggaagagt atgtgggcta acaagcggtt caatttctga
    31201 gattttttgc ggctctaaaa acaaaaatgc gaagacatca gttcttcgca tttttcttac
    31261 ttattcctta ttgcccagcc agcttctgcc gtacaatttc aaacagacag accccggttg
    31321 caactgagac attcaaagaa gatactgagc ccgccattgg aatgctgata agctggtcgc
    31381 aatgctcacg ggtaaggcga cgcattccgt cgccttctgc ccccataact aacgcaatcg
    31441 agccggttaa ttttgcttca taaatgcccg attccgcctc acctgccgtg ccgacaatcc
    31501 agacattatg ccgttcttgt aaatctcgca ttgtgcgagc cagattggta actcgaatca
    31561 gtggcatcac ttccgctgcc ccacaggcga ctttgcgagc ggttggtgta agctgagcag
    31621 atttatcttt cggcacaata accgcatcaa cccctgccgc atcagcggta cgcaaacaag
    31681 cccctaggtt gtgagggtcg gtcacgccat ctaaaatcaa caagagtgga tttttctttt
    31741 ggcttaagat cgcctctaaa tcgtgttcat tcagctcttt ttgtggcacg actctggcaa
    31801 taatcccttg atgcacttca ccttgcgatt tgttatctaa ggtttggcgg ttcacttgtt
    31861 gaattgccac ccctaaacgt tgtaattcat ttaatagtgg cattaagcgt ttatcttcac
    31921 gcccttttag caccagcact tcaattaaac gctcaggtgc attatccaaa aaggctttca
    31981 ctgcgtgaat gccataaatt tgttcgctca tattttatcc ttaataattg ggcgaaccca
    32041 tcagctcgcc catataaata cctaactaaa gcaacatctt cacaatttta tccaacttaa
    32101 ccctgccgaa ttttttcagc aatttacgca cattttcagg gtaatcggtt aaaacttcca
    32161 aatcactgta gtgagttaaa atctgcgtat gttggcaaat ttggtttaac tccgtttctg
    32221 ctttttcact taattgatgt tgaggatcgg aaattaaaat tgcattttcg gcatctaacc
    32281 gccacgctct tgggttaagg ttattgccgg tcagcaaaat atagcggtta tccacccaaa
    32341 ccccttttaa gtggtagctg ttttcgccat ctttccataa gcgaatggtt aactgtttat
    32401 tttgtacata accgtccaac cgttttgcaa aggctcgtaa gttcttttca tacaaataag
    32461 gcagagccga tgccatcgtg aatttttcgt ccggcttggt gtagaaatca ttagcggttt
    32521 tatcccccac aataatttca accgatttgc cgtttgccaa tagccattca atacgggttc
    32581 tcagagaatg cggaaaatta aaatacggag tgcaaatcgt taatttctgc tcagtttgat
    32641 aaaacaacgc ttcaatcact ttatttaact gattcttacg tcgccctaag cctactaaag
    32701 gagaaaccgc taagcgacca ttttcagcaa caccgttaaa taaatacgct tcccgactta
    32761 attgtttgcg gaaatgctta atttgcgcac gaatttcagc cgttttcggg cgattttccg
    32821 tatctaaacg ttttaccgct tcattggtta aaagatgctg ttgaataaac gtcacccagc
    32881 tatcggcaag aactttattt tcaatgacgt ggtaacggtc ataacggtaa cgttcaaatt
    32941 gatgcaaata cacattatta atgcttgctc cgctatacaa aatcgtatcg tcaaatacga
    33001 agcctttcaa atgcaataca ccaaacactt ctcgtccgtt aatcgacaca ccgtaaaagg
    33061 caatctcttg ccctgccggt aaaccttgtt cgtatttaac ttttgcatac cagtcggcgt
    33121 tagataaatt ctctgcctca ccaatacgcc cacgttgggc tcggtgccaa tcaaccaaaa
    33181 tgttaatttc cagttcagga ttatttcgct tcgcttgata taaagcagct aatacttcct
    33241 gcccggcttc atctttttca aagtaaagag cggttatata aatacgcttt tttgccgttt
    33301 gaatcagctg taaaatttgt tgtttaaacg ctttgctcga ggcgagaaac tgaacctgct
    33361 ctgccacttg tggtaagtat ggcaggcttt tcaataggta ttcagcttta cgttgtttgt
    33421 tcaaaattaa catcattgat tccaaaattt tcaatcgttg cctgctattt tacactgaaa
    33481 tcgccaataa agcgattttc gcttaacggc attgatagct ggtcaaacga ttaggatctt
    33541 ctccggtttg ataaattgcg actttcggat aagcacaaag cgggatctgc ttggctttat
    33601 tagggtaaag ctcaccggct ttggcggcaa tactttccgg ctccagtcct ttctcaaccc
    33661 aattttcaag ggcagtgagc atatcaaaat cattcaccgt tgcccctcgc ccacaatggt
    33721 tcattgccga cacgaaaaac aattttgcaa aatgttgcgg attttcgacc gcttgttgta
    33781 ggctttgata ccaatttttg agatcaactg ccgaaaaaat cgggtctgaa acgccttgat
    33841 aaatcagcat tttgccaccg ttctgcttaa aagcggataa atcaacttga tctgtatcgt
    33901 gaatgctccc taccgctttc acttgttcgc tggcttgatc caaatctacg ctgagtggat
    33961 cacggctcgg cactctgggg gctaaatagt aatgggtcaa acttttcaat cccattttaa
    34021 aactaatgct gttgggctga gcggtttggc tatcacctaa tttccaatcc cgccagcctt
    34081 tagcgttaat gccggaatca tacgcccaag ggctataaat cagctcgcct cgactgtttt
    34141 tcgccccctc gaaaatcgtt ttgattaaag cgactttttt ctgccccagt tgctttgcca
    34201 ccatttccgg ctggaaatca cactgttccc acgcattaat taaaccgtct gctaagccgt
    34261 ctaacttatc gcaacgtgtt aatacgccat tggcaatcac atctaaatct tgttgagtga
    34321 gggcttggga taaaattttg tcgccatcac cattcttcgg agcaactgcc aacaaggctc
    34381 gattatccca tacttccgcc aagactgaac gggaaacccg aaagccgggg ctgcctgcaa
    34441 tcacaccgtc aaattcctgt ggataacgca ttgccgccat catcgcctca cgaccaccat
    34501 tcgagcagcc cataatgtaa ttgtgcttgc tcggttttcg gtaaaattcg gcaatcaact
    34561 gcttggcaac cgtggtcact ttgccgatag aggcataggc ataatttgag cgagcttcgg
    34621 gatctgcggt aaacactaaa tctcgagtgg cgtgaccact gtcgttactc actactgcat
    34681 agcctctgtt taagccattt gcaccactcg ccccgtgcgg atagagctta ccaatggcag
    34741 ggaaaatcac cccacctaca ccgcccgccc cctgaaataa gaatttttca ttccattgtt
    34801 cgggtaaacg tagctcaaat tgaataccgt aaggaacatt atccacctcc acccgttttc
    34861 caatttcacc ttgtactaaa cagtaagccg gcaactcagc agatttctca acccattcag
    34921 ctttataaat agccgttttt tccggcgagt tagattttaa cgcgacacat tgttcagcca
    34981 tagaattagc caaagcagtg tgagaaaaaa cggagagaaa aataaaaaga aaagcgatta
    35041 ttttcatcat ttacatcaat acaagcggtt atttttccga aaatttttgc aaattttaaa
    35101 ctgagtgtct atctatcgct ggaaaagcta aggcagagtt tcctctgcct tagaaagatg
    35161 aattgaatta cattttaagc aaacaagcgt ttttcgcctt cgccggctac gttttccaca
    35221 caacgtccgc aaacttcttc gtggccagag tgcgagccga tgtcggtagc ataatgccag
    35281 caacgagggc atttctcacc atctgcattt tccactttta ctgcgagtcc ggctaattcg
    35341 ccttccgcaa tatctgcttc cgccagtggt ttaacaatcg cttgtgaggt aatcagcaca
    35401 aagcgtaatt cattgccaag ttgttctaat aacgggcgaa tttcatcatt ggcgaatacc
    35461 gtcaccttgg cttctaagcc agcaccaatt actttgtctt tacgggcttg ttccagcaca
    35521 cggttgactt ccgcacgcac ttttaagatt tgttgccagt aagcatcatc taatttatct
    35581 tgctcggtta aaccgaataa tccggtgtag aattcttcgg taaagacaaa ttcacttctg
    35641 ccttccacct gcggtaagta gccccaaatt tcatcggctg tgaaggataa aatcggtgca
    35701 atccaacgta ctaacgcttc tgcaatatgc cataacgctg tttggcagct acggcgggca
    35761 aggctgtcgg ctttggtggt gtattggcgg tctttgataa tatctaagta gaaagacccc
    35821 atttcaatcg agcagaaacg cattaaacgc tgtactaccg tgtggaattg gtagttatca
    35881 taggcttctt tgatgtcgtt ttgagcctct aaagcacaag ccaccgccca gcggtctaag
    35941 gcgatcatct cttgcggttg aactaaatca ctttttggat cgaaaccgtt caagttcgcc
    36001 aataagaaac gggctgtgtt acgaatacgg cggtatgatt ccccggcact gtttaaaata
    36061 ttgtgcgaaa cggtaatctc accggtatag tcggtggagg caacccataa gcgtaaaata
    36121 tctgcaccgt ttttgttcca cacttcactt ggcacaatta cgttgccaag cgatttggac
    36181 atttttctgc ctttctcatc tacggtaaaa ccgtgagtta gcacttgttt gtatggtgct
    36241 ttgccgttag tagcagtgga aagcattaaa gatgacataa accaaccacg atgttggtct
    36301 gaaccttcta aatacatatc cgctgaattg ccgttaaatt cagggcgttg ttctacaaca
    36361 gaggcatagg tcgatcctga atcaaaccac acgtctaagg tatccggcac tttgcggtaa
    36421 tctttggctt cttcaccgag caattccgca ggatctaaat cccaccacgc ttgaatgcct
    36481 ttttcttcta cacgtttcgc cacttcttca attaattcta aagtgcgagg atgtaattct
    36541 tcggtttcat tatgcacaaa catcgccatt ggcacgcccc aagtacgttg gcgtgaaata
    36601 caccagtctg ggcggtttgc caccatcgta tcaatacgag cttcacccca gcttgggatc
    36661 caacgcaccg atttgatttc tcctagtgct tgctggcgta agccttgggt ttccattccg
    36721 ataaaccatt gtggggtagc acggaagata atcggggttt tgtgtctcca acagtgcgga
    36781 taactatgct tgatgcggga taattttaat aatgctccca cttcttgtaa tttttcgact
    36841 actttatcgt tggattcaaa cacacctaag ccggcaaaga acggggtgtc tgctttgaat
    36901 ttaccgtcat tggaaattag ccctgccatt tcaatgttat atttgcgagc gaccacgaag
    36961 tcgtccgcac cgtgatccgg tgcagtatgc actaaccctg taccaccgtc tgtggtaacg
    37021 tggtcgccaa aaataaatgg cacgctgtaa tcatagaatg ggtggttaaa gcgtaataat
    37081 tctaagtttt cgcctttggt ggttgctaaa atctcagcag attcaacgcc tgctgctttt
    37141 gcaacatctt cgactaaatc gaccgctagt aacacacgct catcacctaa ttggactaag
    37201 gcatagtcta attcagggtt gatcgcaatc gcacggttag acggaatagt ccaaggggta
    37261 gttgtccaaa taaccgcaga taatgcccct ctacctttac cctgtgcgtt gaatttttct
    37321 tctaccgcat ttacgtccac agcattaaaa cgcacataaa tagagggaga aactttatct
    37381 tcatattcca cttcagcttc cgctaacgaa gatccacaat ctaagcacca atgtaccggt
    37441 tttgaacctt tgtataaatg cccgttcgca atcactttgc cgagcgtgcg aataatattc
    37501 gcctcagtgt taaaattcat tgttaggtat gggttatccc aatcacctaa aatacccata
    37561 cggataaaat cggctttctg accttctact tgttctttcg catagtcacg gcacgcttgg
    37621 cgaaactcgg cagccgaaat tttctcattt ggtttaccaa caatcccttc tactttcagc
    37681 tcaatcggca aaccgtgaca gtcccagccc ggcacataag gggtatcgaa acctaatgcg
    37741 gttttcgatt tcaaaatcat atcttttaaa attttattca ctgcgtgacc taagtgaata
    37801 ttaccgttag catacggagg accatcatgc aaaataaagg ttttcttgcc tttcgaggca
    37861 gtacgaattt tttggtataa atttttgtca taccaatttt ttaacatatc gggttcacgt
    37921 ttcgcgagat ccccacgcat aggaaagcct gtttcaggca agtttaaggt gtttttgtag
    37981 tcaatagtca tttttttatt tctcgttaaa attatctgtt ttatgcctag cacggcatag
    38041 ccgtactagg ttaagcatag ctcagcccct ctggggctgg aaactagaaa ggctcacctt
    38101 gcaaattcct taaaaaattc aaccgcttgc aagcgatctt tctcaatctg ggcttttagt
    38161 gcttcaaagt cgggaaattt tatttcattg cgtaattttt ttaaaaagat cacttcaatc
    38221 gcctcaccgt aaatagaggc attgaaatca aaaatatgca cttctaataa cggcttagta
    38281 ccgttaatgg tcgggcggtt gccgacattg gcgattccgt taaaactgcc ctgtttggtc
    38341 ttcactttta ccgcaaatac cccttgaatc ggcgtaacca aacgattgag cataatattt
    38401 gcggtaggaa aaccaatggt tctgccgagt ttattaccgt gtgcaacgcg tcccagaatc
    38461 gaataaggct tgccgagtaa tttctctgcc aaatctaact cattgttttg taaggcttct
    38521 cgcactaatg agctgctaat tctttcttcg tttaagctat gggtatggct ttcttccacc
    38581 gcaaagcgat attttaagcc ggcattgcgt aaagtttcaa aactgcccgc ccgttttgcc
    38641 ccaaagcgaa aatcatcgcc tacacttaaa tagcgtactt tcagtctttt agcgagcaaa
    38701 tcgctgatga aatcgtctgc cgaaatttga gcaaattttt cactaaaacg cacgcatagc
    38761 acaaaatcca caccggcttc ttccaaatat tttagcttat ctcgcaggcg cattaagcgg
    38821 gcgggcgggt tacaagcggt tgaatttcca cttttttttg caaaaaactc tcgaggttgt
    38881 ggctcaaata acatcacaac tgagggcaat cctaaatcta aagctctatc acaaagacga
    38941 gccaaaatat tttgatgccc aagatgcaca ccatcgaaat tcccgataga gagaacacag
    39001 ccttgattta aagcgatgtg tttgtctaag ttgtggaaac ctcgaataag ttgcataaaa
    39061 gataaaccat tttataagtg aaaattgctg tgattataac gagaaatct
//
LOCUS       DANMCL010000010        37799 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.010, whole genome shotgun sequence.
ACCESSION   DANMCL010000010 DANMCL010000000
VERSION     DANMCL010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 37799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37799
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.010"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            84..302
                     /locus_tag="PXF40_000479"
     CDS             84..302
                     /locus_tag="PXF40_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5801855.1"
                     /translation="MARNKRVRDMSNFEIRGELMKIGKSLSQLGIENGLAKTTVRNAL
                     DKPYPKGEQIIAKAIGKTPQEIWPSRYE"
     gene            312..2282
                     /locus_tag="PXF40_000480"
     CDS             312..2282
                     /locus_tag="PXF40_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5801856.1"
                     /translation="MKEWFLAKEIAGLSGVPELPNSVSRLATKEGWQKRQIQGVRGVT
                     YEYHLTSLPIETQQQLRLNAALAVIPQAAELQPKRDDPALIARLNNATDKGRDKAKGK
                     AEACMQLQAFLDQGFSYTQAEAGAATAKNVSQGSLKNWYYKVKGHPVHLWQAILISES
                     GRSKKPQLKAKITEEAWDCFLADYLRPEKPDLRASYRRTQAIAKQYGWQIASLQTFQR
                     RVLAEVPYEVILLKREGANAVAKLVPALQRTVKDILAGEWINGDGYQHNVFVKWHTGE
                     IVRPKTWFWQDVRTRKILGYRTSISENTDSIRHALMDVIFNVGIPKTLTLDNTRAAAN
                     KAMTGGIENRYRFKHTELDPKGIMPILGIDVHFTSILYGEGHGQAKPIERAFGRGGIG
                     EKIDKRPELSGFYTGRNAQETPDNYNGGKDGVDYNTFLKAIAAGIEEYNSQTERHTEM
                     CRGELSFNQVWERDYHPSNVRQASPEQLRLLFLQAETVSIKRNGSFTLKAAGKLYGLT
                     NVYWAESLIGITDKKVVARFDPDDLHGNVYVYNLEGQFLAEAVCREAKGFGDTSASRE
                     QGRLYQKVVKSAKAQAEALELLEAHELASLAPQVDVPEPIEKKVKEVLVKEDFIVDFN
                     TVRKATVVEETEEISIFDEVLLKQEKQLRIVE"
     gene            complement(2462..2950)
                     /locus_tag="PXF40_000481"
     CDS             complement(2462..2950)
                     /locus_tag="PXF40_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801857.1"
                     /translation="MLFRSLTDDEIHQIALDSARATFSGFKLKRANAIVMKNCITLFK
                     LSTINFCLAEYHSSFHHLTSIDDLDGIMPTVKKVAQMLSLQESKALIWLLYLKWLFVM
                     RQRSLQVLLENSADLIQGEVIAQPLPTFVKAVLAFQLETYHGLPEWIPEFDSAEFWQS
                     LS"
     gene            2982..3923
                     /locus_tag="PXF40_000482"
     CDS             2982..3923
                     /locus_tag="PXF40_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5801858.1"
                     /translation="MTLIDQIKQHIAESGSSQGKVAKEAGINAGALSAYLNENYKGNN
                     EELEAKLIAYLERIEAKKREFVEAPSFIETKTANQIFGSLRFAQNTGVLAIIHGASGV
                     GKTQAAREYRKRYANVWLVTASPSRSSLSEVLYEIALELGMNDAPRRKGTLARLIVRK
                     MKGTAGLLIIDEADHLPYEALEELRLLQEEVVNESDIGAGVGLVLIGNDKVYTRMKGG
                     INPAHEYGRLWSRSAKRTSIQKTKKEDTQAVAKAWGLSENQEALKVMQAITETGGGLR
                     ILTHTLRLAAMVAKDRMIPLTADLIQLARKDLLSTGD"
     gene            3926..4240
                     /locus_tag="PXF40_000483"
     CDS             3926..4240
                     /locus_tag="PXF40_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801859.1"
                     /translation="MRTPKPKHSFNRTNQAACRFLKQTQKAIIRLNSLGFTVLNIDFT
                     RIKPRIEVEIGNNKHIAQGLIYEGKAYRYSFGKSEDLGRWEGYYTMLEGIRVWWRQAA
                     IH"
     gene            4252..4488
                     /locus_tag="PXF40_000484"
     CDS             4252..4488
                     /locus_tag="PXF40_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801860.1"
                     /translation="MKTLALLTALLGLVGCDLVQSKQAKNYIGNNLTEICIDNVVYLI
                     YSGDKKGGITPKVNKDFYPYTCTNKEERQNGKTR"
     gene            4472..4765
                     /locus_tag="PXF40_000485"
     CDS             4472..4765
                     /locus_tag="PXF40_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801861.1"
                     /translation="MAKPDETPITKAECQSQLAELGVQYKKLPMAITRHICNATTNIH
                     GKVIKVSVVERVGYGVQITAQGNEKSCLVTYEAMLGMAEAMGLFDEVKEQNND"
     gene            4887..5105
                     /locus_tag="PXF40_000486"
     CDS             4887..5105
                     /locus_tag="PXF40_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5801862.1"
                     /translation="MNDELAAISASYAQHNRYQHYAEKAAEAERKGNYKEAQDHWEVA
                     KLSAKKTANRDWAEQRAEFCKRMHNKPF"
     gene            5115..5297
                     /locus_tag="PXF40_000487"
     CDS             5115..5297
                     /locus_tag="PXF40_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801863.1"
                     /translation="MTETVKAQLNSQLNEAIIQLIQAQKYLNQDDAIRSGVYIGTVQD
                     LLPKVHLKLLTANRKH"
     gene            5314..5703
                     /locus_tag="PXF40_000488"
     CDS             5314..5703
                     /locus_tag="PXF40_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801864.1"
                     /translation="MAITEEQWKEIKQKLDSIIGRVKFRYKEHLLTVDVVQIKRSLKL
                     AVYVDGEIDGAWTKEGHEIRPYLEEVWYRKERPFFNAKEKKEYRGLMSKKKLNEKIVT
                     YSPMFPSPTALTRQYKKLDGLELIEVI"
     gene            5752..6039
                     /locus_tag="PXF40_000489"
     CDS             5752..6039
                     /locus_tag="PXF40_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801865.1"
                     /translation="MNKNEFFKKYHLEGSLAILDLDANDDQSQFCYQALLEYRELPLD
                     TFLAEYSDDEDMTESEFIELMLDELEWIIRRAKNAKRFVKKRQKTMREEIM"
     gene            6158..6703
                     /locus_tag="PXF40_000490"
     CDS             6158..6703
                     /locus_tag="PXF40_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HDL5801866.1"
                     /translation="MTDKAKLIQLIHIAKSQLAMDDLSYREMLKRLTNKTSSTKCTVV
                     ELHKVLHELQTKGAKVKYFAKRSKKPTAYSPATGETAVKSQIAHKIRAVWITMGKHGF
                     LNDPSEKALNAYMRKVINNKTRPTILLNVSALEAGDASYMLEILKKWHKRVMIKALSK
                     SCTVDPKISYDELVEWYNEVM"
     gene            6690..7223
                     /locus_tag="PXF40_000491"
     CDS             6690..7223
                     /locus_tag="PXF40_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801867.1"
                     /translation="MKLCRCPICHSDIHLEALVEDEAGRELLGKISQLTHGVAQPMVA
                     YLGLFKPQKSNLNNSRALKILNDVLALYPCSLLLAQALSETVVSIRKKRQQAMENGQK
                     IEPLPNHNYLKSVYETQKVHFAVVRTGKTERETMKAELEKTRNAIAYVQRFVDLGREE
                     VVKNSPEYQIWLAHKPK"
     gene            7388..7747
                     /locus_tag="PXF40_000492"
     CDS             7388..7747
                     /locus_tag="PXF40_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5801868.1"
                     /translation="MELVDIFEEKAPEVLTDLAKHIEVALEEKCQFSPEKAKQIGIDI
                     AQQMAQNWGGEVIYIPRNLLMALNERDMKIYEEFNGNNHRELARKYNVSMQWVYKIVK
                     KVHKDEVARRQMSMFEM"
     gene            7883..8392
                     /locus_tag="PXF40_000493"
     CDS             7883..8392
                     /locus_tag="PXF40_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5801869.1"
                     /translation="MSQNLTFRQIFDRLIGHEGGYVNHPQDPGGETHWGITKRTAVAN
                     GYMYAMKNMTREQAYQIYEKAFWQRYRCAELKPAVAYQFFDAVVNHGFGNASRMLQRA
                     VGVADDGIIGNITLQAINAKSESDLLMLFNAERLKFYTKLRNFPTFGKGWVNRVAGNL
                     EYAAQDNEV"
     gene            8395..8664
                     /locus_tag="PXF40_000494"
     CDS             8395..8664
                     /locus_tag="PXF40_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5801870.1"
                     /translation="MAKLFKELLSTNGTLSTTSTVQFFGTLCVFGLMVYAVITQQPYA
                     ESLLNNVLIYLFGATTAKGVVTSYQAKIKGGIHKQQSTFKEEEGC"
     gene            8658..9005
                     /locus_tag="PXF40_000495"
     CDS             8658..9005
                     /locus_tag="PXF40_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5801871.1"
                     /translation="MLMQQILGVIGVIAAILSYALFKSWQLKRERKKNAILQAEKQQQ
                     AVEIEQKKAEVKYVYISKKNNEKVTRSSASDIDDKLQQHGYFRDNNRLHGVQSDLSEP
                     CGYAGNETSDSCS"
     gene            9032..9184
                     /locus_tag="PXF40_000496"
     CDS             9032..9184
                     /locus_tag="PXF40_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801872.1"
                     /translation="MKYIKKLRKRWQIWRFLKNHPEVAQRRDLLAIAIKQGVENPVGR
                     ARRREP"
     gene            9184..9519
                     /locus_tag="PXF40_000497"
     CDS             9184..9519
                     /locus_tag="PXF40_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2730 domain-containing protein"
                     /protein_id="HDL5801873.1"
                     /translation="MDLFTVFWESIRANFGFISALLTIVVTAFWLKLDSKYAKKNDLG
                     ELLEIAKSHDNRLTTLETKVENLPSAVDVEKLKTLVTDVKGDTKATSKQVDSISHQLG
                     LLLEAKLKE"
     gene            9521..9817
                     /locus_tag="PXF40_000498"
     CDS             9521..9817
                     /locus_tag="PXF40_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801874.1"
                     /translation="MSLRDLLTQDQRLVILRSLAEAGYDANESIISDCLDLYGHDISR
                     DLVRTHLSWLEEQGLLTLERLRDGYMVASITQRGLDVAQGRVVVSGVKRPRPKI"
     gene            9840..10412
                     /locus_tag="PXF40_000499"
     CDS             9840..10412
                     /locus_tag="PXF40_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3486 family protein"
                     /protein_id="HDL5801875.1"
                     /translation="MSEKNTRGRASKVDLLPPNIKTQLAMMLRDKQYSQSQILEEIND
                     LIRDCGLPDEMLLSKTGLNRYASRMERLGAKIRNAREVAEIWTKQFGEMPQTDIGKTL
                     MEMVKQIAFETSLKLGEQEGGIEPKQLALLSSAIQRLEQAESLSFKREQAIRKEVAQQ
                     AAETAEKVVVQAGLSAETVRTIKEQILGIA"
     gene            10412..11968
                     /locus_tag="PXF40_000500"
     CDS             10412..11968
                     /locus_tag="PXF40_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase family protein"
                     /protein_id="HDL5801876.1"
                     /translation="MALLNNRPLNELAPECRSFLESIHAFNPNELLLGYQKRWIADDS
                     QLKIAEKTRRCGLTWAEAADNALIASTRKSDGGSDVFYIGSNKEMAREYIDAVAMWAK
                     AFNRVAGEIQEEIFEDEDKDILTYVIYFSSGFKVKALSSNPKNLRGMQGVVVIDEAAF
                     HEYLAEVLKAALALTMWGAKVRIISTHNGSENLFNELITDSRAGRKRYSVHTITIEDA
                     CRDGLYQRICQVVTKKTWSPEAEKEWIENLLNDTASEEDALEEYFCVPKFGSGLWLSR
                     ALIERQMSEATPVIRFTAKDGFSLVAEPTRYAEIAEWCELELEPILATLNPDLLHFMG
                     EDFARSGDMTSLVVLAQQQNLVRKVAFIVELGNMPYKQQEQIVMFMLKRLPHFAGGAF
                     DARGNGGYLAEAARDEFSTLIDCVQLSEKWYREHTAPFKAALEDGELEAIPKDADILA
                     DLRSFQVVKGVPRIPDKRTKSADGKSKRHGDTAISLLLAHYASRQLVQMPVEPVSRRP
                     RHSQQLTEGY"
     gene            12087..13541
                     /locus_tag="PXF40_000501"
     CDS             12087..13541
                     /locus_tag="PXF40_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 family protein"
                     /protein_id="HDL5801877.1"
                     /translation="MAKKNNLISEIATRARSIDYWAFGYYLPNPDPILKRMGKDISVY
                     RELLSDGQVRSGVRRRKAAIKGLEWRITTTNNEKVDEQIYQIFNRLPMNNLITEMLNA
                     ALYGYHISEVIWAKEGELFVPTEIIGKKPEWFMFDDENLLRFRTKENWADGELLPDDK
                     FLLTTQEATQDNPYGLGDLSLCFWAATFKKGGFKYWLEFTEKYGSPWLIGKHPRQAHN
                     TDKERLADALEGMISSAIAVIPEDSSVEIKDAAGKSASTDAFEKFLNFCKAEINIALL
                     GQNQTTEQESNRASAQVGLEVMEDIRSDDQAMIEATFNTLLQWIVKYNFNVEQLPKFE
                     FYEQEAINTDQVERDSKLHAMGVRFSKAYFEREYGFEAGDIEVQAVEKAEKSANTTEF
                     SEGQRRTQVPMPVPILEQLEHEGEAMVDDWLQGVRDKLAQADSLEDFQSQLDSLIPEL
                     SFAEYGELLALGSTVAELAGRQSVNDEIKAKRNA"
     gene            13534..14811
                     /locus_tag="PXF40_000502"
     CDS             13534..14811
                     /locus_tag="PXF40_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5801878.1"
                     /translation="MRKFTFKQQAQYFEKKLNLRTNSYLDILGEEHDYFFVVAGANRN
                     EVLSEFRKAVDEAIHNGETLENFRKRFDEVVAKTGWEYNGGRNWRTRIIYDTNVYGAY
                     NRGRLQQHLELAEDMPYWEYQHNDNAHPRPQHVAWDGLVLRYDDPFWKYHYPIKAYGC
                     HCTVQALDDFDLKHDGKTVSPPPEIEFEQKTVGVRTGNSRVVTVPKGVDVGFTPHNFD
                     NLKAGRAANVDKLLMQKMVTADPIFASKAVSDLLAKEPVAKLHNQAFKNWVNDVANAK
                     GSALSQVENMQLLGVLPVAVIERLQQINLAPQSAIIAITKGDMVHALRELKQNTGIAV
                     PLEFWEKLPAKLQYPNAILLEKQQAETTLLFIYDVAQTKIAVKVNYDATLQDRHGAKG
                     RQKVLLNRAVTGSLFQDTTGLKSSKYEVLLGEM"
     gene            complement(15013..15357)
                     /locus_tag="PXF40_000503"
     CDS             complement(15013..15357)
                     /locus_tag="PXF40_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801879.1"
                     /translation="MMVNAEQAIELVYDLLLSRQWLVTKAEKLPLDPLSEKEAVMFLY
                     TLDQQTEASWLQLTPEQRATANGLIMDFIAKCLTSTKQWLVSDNIVPELQAIEIIKHE
                     IFLSHNSLVMPN"
     gene            15421..15885
                     /locus_tag="PXF40_000504"
     CDS             15421..15885
                     /locus_tag="PXF40_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5801880.1"
                     /translation="MIKITLNNTQAVKSLQQIANQLEQPRRLYGILGETLKKIHTARF
                     KAEQDPDGNNWKPLASSTLALKRKRGKSTKILRQDGYLADKTAYNVTSDNVEFGSQEV
                     YARLHQFGGKAGRGKKVTVPARPWLGVGDKDEQLLLRKAEWHLGQIIGRMGK"
     gene            16120..17235
                     /locus_tag="PXF40_000505"
     CDS             16120..17235
                     /locus_tag="PXF40_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HDL5801881.1"
                     /translation="MTQIEIFKAGKRYDANGTLIDITPEMLQQTVAAYNPEFHEAPLV
                     IGHPKSNNPAWGWVKALSLEGDVLKAEVDQLDAEFSEMVASGKFKKVSAAFYLPDSPN
                     NPHKGVLSLRHVGFLGAMPPAVKGLKQVEFAEDDDFVVFSEWGVASLFSRFRDWLVSE
                     FGLEKADKALPPHEIDWLKEEAMRSQISKQVHAEQATPEPIFNEPAQPEGEPEMSAEE
                     KEELERLKAENEQLKAEKAQAEAEKMEAELEAEKAGNAEFCEGLVKQGKLAPVAKAAF
                     VQALNNLSVLKAGREPEFNEGEDVVSQFKSAMSQSPQIIQFGEYATADKANPQEAEAV
                     EYAEGTDPVSIEADQKVRAYMKAHNVGYAAAFNAIYR"
     gene            17266..18192
                     /locus_tag="PXF40_000506"
     CDS             17266..18192
                     /locus_tag="PXF40_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HDL5801882.1"
                     /translation="MTTHNLQKLRVQDPVLTELAQGYHNNELVAETLMPTVEIEKEAG
                     KIPTFGRLAFRLPSTVRNLRGSSNRLDPEDIGAIDVALEEHDVEYAIDYREENEAIFS
                     LRQFALNTTQDVIALGREKAVATLALDESRYETDNKVTLSGTSQFSHKDADVFKVFDT
                     AIRAVKRAIGRKPNVCVISGDVWAALKEHPAVVEKLKYSQVAIVTPEVFAKLIGIETV
                     KIGEAVYEESGQLKDIWSKDIVVAYVAPRSTGGKGTVYEPSYGYTVRRQKGLFVDTYK
                     ESGGKIEVVRTTDIHKPHLVGAAAGYLIKAAV"
     gene            18261..18542
                     /locus_tag="PXF40_000507"
     CDS             18261..18542
                     /locus_tag="PXF40_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801883.1"
                     /translation="MAKFIVLHTPILHDGKRYEVGAEIELTAEQAENNAINLKAVEAV
                     PKPPKNASKPEDEPKPEGEPKPEDAVTEDDVKLAEAKIAEAEQPKGNKK"
     gene            18542..18976
                     /locus_tag="PXF40_000508"
     CDS             18542..18976
                     /locus_tag="PXF40_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5801884.1"
                     /translation="MYVQIDELLTAFSRKIVVQLSNDEPTATEPDLKMLETAVKVANE
                     RIDAALRSRYTLPLADVPTLINQHALTLARYWLYARRPETKMPDTVKETYQQAVKELE
                     QIATGKLHLGIAESSQILEDDVLADNSEYEVRANARIDTSRY"
     gene            18982..19479
                     /locus_tag="PXF40_000509"
     CDS             18982..19479
                     /locus_tag="PXF40_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gp37 family protein"
                     /protein_id="HDL5801885.1"
                     /translation="MSATQPILEDICQHLRQALPEWEVELFPNDPSTYHLSHINGAVL
                     ISYLASKFEKPRTTQAVLQVRHVQIALTVLTRDLHNDVGALDLLDKLRLLVVGFKPQN
                     CGECWLIDEFFNGSSEETGLWQYQLILQTETQQVQHQAVENLPKFVTAHLRRQDQPGS
                     PGLKT"
     gene            19564..20949
                     /locus_tag="PXF40_000510"
     CDS             19564..20949
                     /locus_tag="PXF40_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HDL5801886.1"
                     /translation="MTFHHGSETERVNGGSVPVSVVDSAIIGIVGTAPIGAVNELTVC
                     LTKKDFAKFGTILNQGFTLPDAFDILARYAAGKVYVVNVLDPSRHRTTVTDEVLTLDR
                     NTLTAQTAKTGIIAVTRVKDGANVLNADRYSVDLQTGVVTFVSAPSAPKISYIYADPS
                     KVTEEDIKGGVDSLTGKRKGFELLRDGFNLYGADAKILICPEFDKTASCAAALATLAD
                     QLHAKAYIQLPKGTSLSKAIQGRGPAGTINASASNENVRHFFPYALGSSNTLESLATH
                     AAGLRMLIDVEKGYWFSTSNKELKGVIGLEIPLTARVDDKQSETNLLNAVGITTIFNS
                     FGTGFRLWGNRSSNFPTVTHISNFEVASRTGDIIDESIRQAELQFIDLPIDDALLDSF
                     LETIDTFLRTQKSLVGYSVSLDYEYDLVDAFSRGQVPIVYEYTPKIPGERISNKSVMT
                     RKYLANLVSQR"
     gene            20960..21475
                     /locus_tag="PXF40_000511"
     CDS             20960..21475
                     /locus_tag="PXF40_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5801887.1"
                     /translation="MSIAINQIVNGNVYINGNSQMGRVNEVKIPDIEFEFIEHKGLGM
                     HGVIKLPAGTNAIEAEITWDSFYPEVRAVMLNPYKYTQLQIRSNLQVFNSQGLAAEEP
                     MVTIMNVSAGKIGGTGHKNKENAEFADTLNVHSIKQTVAGRELLFIDVLANIYRVNGV
                     DVLQKFRTNIG"
     gene            21571..21885
                     /locus_tag="PXF40_000512"
     CDS             21571..21885
                     /locus_tag="PXF40_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5801888.1"
                     /translation="MANAAQQVLTNLRVQTTYKLQYPIALPDGRVIETLDVRRPKGKD
                     FRLLDEKGFDPEKDGVKILRFYIQQLTTLVPEDIDELDAADIKGLNNLLEDMLIEGKS
                     DK"
     gene            21882..22034
                     /locus_tag="PXF40_000513"
     CDS             21882..22034
                     /locus_tag="PXF40_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005658873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5801889.1"
                     /translation="MSELDTVYADLAWWFKFSPSELLELDLVDIPKWVEQMNRQIKAG
                     YGQILR"
     gene            complement(22013..22315)
                     /locus_tag="PXF40_000514"
     CDS             complement(22013..22315)
                     /locus_tag="PXF40_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801890.1"
                     /translation="MLTKLNNRITEWAGFEACVTRTECTAKWLLAVALVGWSIFYWLD
                     AIQSIQSLSEGVSFVLIYGLILTILAWVGVYLAWGVAILLTLATEPFIWLYRKICP"
     gene            22363..25020
                     /locus_tag="PXF40_000515"
     CDS             22363..25020
                     /locus_tag="PXF40_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5801891.1"
                     /translation="MANNLAIGMVIGASLSSGFHGAFSGAKKKLEQLEQAVAKNQQSH
                     SKLGSELTALRSKQATLYAEMSRASSKGGAGLALMQQEYKKIGKEIANISREQRKWST
                     ELEKSIAKQTKLRNAMERHTQAKENRDELKGKIIGTVASAAMGVGVMKTYMEQEEAAN
                     NLKISMLKADGSFGKFEEIGKIADTLGTDLPGTKKDFYKLAMALKKQGVSDDVLTGGA
                     LKTSAELNVLLDMDQESGGEFLAKFMESHRLNENELPQAADYLQRAMFAGGLSKEQMY
                     ESMKYYAPKLNSMKLTGAENTEKVLAIEAMAGQQGLEGSTFGTGLNMMLSRMNKGPEM
                     LKAAAKGMKAEAREMMEAVGVEFNFWDKNGSFKGIDGMLAEMTKFEKIRKKFGDKGVG
                     LVAEELFGIEGGRLADILAMKGQKGLDEMLSKMREQASLQDRINLKTNTLGAALESLG
                     GAWETFVGDIGSVFAEDIKGFSKGLQSAVEWLVPFVSKHKEAIKFVGGLVAGLVILRG
                     VLQAGSFVIQTVTMAMNALKIAAMTNPIVLVIGAIAAGAYLIYSHWDSIAPWFANLWQ
                     NVTAYFNQFWTWVKGVWSGVTDWVSSVWNGVATFFGQLWTTITSLFSVAWTNIQTIWG
                     GATAWFSGLWDGIKSAAFGMFDSISQKVSSVVASIKSFLGFGDDVDKMGAKIGNVATQ
                     VISKEHSGQLSKTADMAANTGFSSGGFTGQGGKYTPAGIVHKGEYVMTKEATSRLGVG
                     MLDSLNYGGAMGFTQPVLQPILGKQKGFFGSLWDDVKFGANFVGNLLGLNQGSLKTPD
                     FNPNATNASGQNSSIFSNYEPLNRNAVTQQESSQAPQIVVNFNPTINVNGNATQEAQS
                     QIMQQLQMSAYEFEKLLNRVLDQRSRRAY"
     gene            25030..25953
                     /locus_tag="PXF40_000516"
     CDS             25030..25953
                     /locus_tag="PXF40_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801892.1"
                     /translation="MYFMLGNIAFEPVNLTEFSEQHTAEFAEHAVLKGKPRLQAMGEK
                     LNELNFSLRLHHTIGGVESRYQALLEAKAKQAALALIWGSRYKGDYVIVDISSTTLFT
                     DGRGNALAREMQISLKEFVGDNDGGVLGEALNFGGGSLLGSILPSGAVTTLSQIKTAV
                     SRGVELYNSGKRLVDEVQNTVAIIRQLKNDPATALAYLPAALANLDGALGHFGNLTGS
                     SATLGGLQEKLPAAVVFSEEIGEIYQSLQTMRSSLGNASANSWDNWFTPAESALTEVT
                     DSFDHLAKPVAKMTAWIVLRTDEEAENDTVA"
     gene            25937..26164
                     /locus_tag="PXF40_000517"
     CDS             25937..26164
                     /locus_tag="PXF40_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail protein X"
                     /protein_id="HDL5801893.1"
                     /translation="MTQLLKHIVKQGERWDNLSYQYYGNAFEYGRIIDANPHIGFCEV
                     LPIGVTIYIPVLNVKPTNNENMPPWLRGRDA"
     gene            26157..27221
                     /locus_tag="PXF40_000518"
     CDS             26157..27221
                     /locus_tag="PXF40_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801894.1"
                     /translation="MRNVPKPDFSLFYEKTNITAEIEPHLVQLTYIDHLEGQSDELTV
                     EFEDIQGKWIRQWFPTQGDKLKAAIGYQGEFLTDIGEFEIDEVEYSYKPSTINLKALS
                     TGISKANRTLKPKAYENTTLAQVVAKVADNLKLKVVGKIKAIPIKRITQYQERDVEFL
                     ARLAREYHHSFKIVGNQLVFTDKSELGQSEPVLMLEERDTISLRLRDRIKDTAKAVEI
                     SGYDTSGKKVVKKRKKAKALRPNIKQAKSASEDTLKIITRGESQEQIDARGEAALATQ
                     NEDQAAGDIELIGNPKLVAGATILLRNFGVFSGKYLIKSSRHTISRSGGYTTHIEVRM
                     LEFIADDLITLGMEAGNANA"
     gene            27208..27744
                     /locus_tag="PXF40_000519"
     CDS             27208..27744
                     /locus_tag="PXF40_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5801895.1"
                     /translation="MQTHNFGATYQEGIVSAVDPKTHKVRCKIPALEDLETAWLSFLT
                     PNAGGNQFYCLPDVGELVAMLLDAQGEGGCVFGAIYNEQDPTPVADSDMWVKKFSNGT
                     EISHNRKTGDVVVKTNGHLTATAQGGATINANTVVNGTLHATGKITSDEEVSAPVVKQ
                     GTVELGTHKHGGSPEPNK"
     gene            27799..28161
                     /locus_tag="PXF40_000520"
     CDS             27799..28161
                     /locus_tag="PXF40_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HDL5801896.1"
                     /translation="MNRQTSIQLTHWQLAPSTDTVEVVQGIDDIHLCIVNILSTQKGT
                     DILRPEFGSDHFRYIDYPEDVAIPNFVREITTALQKWEKRIEVEEVLVDGSAPHFIFT
                     VMWHLTDDVYREIYRTTV"
     gene            28171..29274
                     /locus_tag="PXF40_000521"
     CDS             28171..29274
                     /locus_tag="PXF40_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5801897.1"
                     /translation="MTEAIKIIDDDVKTVLAEAIADYEKRTGKILQPAHIERSIIQTY
                     AYREQLLRKGINHAFLQTFPQFATGIALDLCGETFGCYRLRDKPARTLLRFSVSGEHT
                     AIVIPKGTQVAINDELYFSTLNDDVITPLITYVEIDAECNQVGVIGNGWESGRVSKLK
                     TALATNYKVTVENIDITSGGLMQEEDEPYRKRILAAPEAFSNCGSIAAYDYHVRSVSQ
                     DIADVNISTPRGGLVRIAVLTQKGLPDTRLLDDIKKHVSAERLRPLCDMVEVIKPTER
                     RYQITARLILLDGYREDLVKAKAREALQLYLSDKTKKLGLDIVPSAIISALRVEGVYD
                     VNLIQPVKTIINETEWANCTAISVEVEEERRDG"
     gene            29267..29833
                     /locus_tag="PXF40_000522"
     CDS             29267..29833
                     /locus_tag="PXF40_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5801898.1"
                     /translation="MASLHYADIIVRDPKYKALADLSKRLNLLDTSQIMTTLVDLLGD
                     ECIPLLAEKWSVTGYDGLLVADSENSKRALIKRAIELHQLKGTPWSIREVLRRLGFGE
                     VEIDEGLKNRLYESTYVSGIPENERWAHYAIRLSNPITNEQARNIRKVLRNFAPARCS
                     LAVLDYKADPIRYNNKATYNGTYNHGSS"
     gene            29843..32122
                     /locus_tag="PXF40_000523"
     CDS             29843..32122
                     /locus_tag="PXF40_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HDL5801899.1"
                     /translation="MAGVQETAQWENHVYRIEENDPVHGGENGVTNKPIKHLANRTLY
                     LRRLLTEAGQRINPKKITATSKNSNDLTGHTHEIDHASLTQKGIVQLNASIQSTSTTE
                     SATPSAVKAAYDKAATAEQKATLANEKVEAIKVGGRNLLIQSNTPHNGNAYSVRYALA
                     EAPKVGEEIVVTLWGELGSQRTGIGVYNSQGATELAKLVKIRDGVYQGKGIWRKPMSE
                     GRERTPNDTHLNVYFYPKTATDNNRIERIQLERGSIGTDWTPNEADLKAEISAIRTKL
                     IPVRGGNVATTLNAAKRSDWFREMQIPYQSGWGYYTQAFHNSGTQHNYSNLPLTGRYY
                     FIAELYHNSGYSHLRITYPSLKRTFESAINLNNEDLILDWREVVFLKDGLYQGTFKTT
                     GTLESAYRLRAARDDERYQPYLQMVDMGYDLANPPVGKNKIIGSVDYYVKNGTSESSK
                     ATMMAAAMPDKNVFWEVALWNAAQQRNVLFKGYSKTNNLSIGKTTDNERDRVQVNGTI
                     QATAPADNANNDQVPTTAWVRKMAKILADGKVSKAGDTMTGHLFIKNGEYSAVHTYNT
                     SGWFAKWEAAPLSDSHFAAIVYANDRETVINRVLIPKKNGTVALINDIADTVRAAVSR
                     SDKSRSRTFPLQTGKKYTTTGSVTIYPDGRIVQIFHLKNIKAAWFDYEASAVGDRHRV
                     VNIPLWTAMPNKIFDVDVKTVRPSNNASTYYIEAAEWLSAWQIYGNDTNKSSVNINLS
                     RFRGGKDEDMDLYVTVEGY"
     gene            32123..32725
                     /locus_tag="PXF40_000524"
     CDS             32123..32725
                     /locus_tag="PXF40_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801900.1"
                     /translation="MAYFVNVIDEQGNYELIDDEFIGLYPDLDFNTLPKLTDKQYQTY
                     LAKANGKERFVNGEFVYEQIKVDMQAVISAEKSAKLAEINQKAQAFINDLAKYNETPK
                     FERDTWLEQAKEAKAWVADPTVQTPTLELIAQMRGIPLDTLRQKAYEKAMAYQTVAAI
                     VAGQRQGYEDRLEQAETLEQIQAIEPMYQLPQGANNEQTD"
     gene            32709..32984
                     /locus_tag="PXF40_000525"
     CDS             32709..32984
                     /locus_tag="PXF40_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801901.1"
                     /translation="MSKLTKLKSWSYHVLIAIDQLFNALTGGAADETFSSRCYRGAVL
                     AENPKKRWRFWHSFLNCLFLDPKHCYAAYKAEVHRKQYPKAFRLGGI"
     gene            32984..33271
                     /locus_tag="PXF40_000526"
     CDS             32984..33271
                     /locus_tag="PXF40_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801902.1"
                     /translation="MKKQNLKLVRGDDVSFRFSIKDSTGQPLALKDLWFDLHLVSYQG
                     EVLIALSTDDGSIETAEAGQMVLHFSHQQTARAEWTSANYDLQLTHDYTRV"
     gene            33281..33445
                     /locus_tag="PXF40_000527"
     CDS             33281..33445
                     /locus_tag="PXF40_000527"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801903.1"
                     /translation="MTSIIELDLTDDLIIEVQLDSTIITGDSFLANLPDLLQIYNQAK
                     SDSSKELNND"
     gene            33438..34142
                     /locus_tag="PXF40_000528"
     CDS             33438..34142
                     /locus_tag="PXF40_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801904.1"
                     /translation="MTKHKNHENHPIAITFYQLGKDVGDINRRLAVIEQREQSAQPSQ
                     PQAEAVTMPQQDAVAINNINAVLEAVEKYKTFEKYNTQWQERFEKFLSRNPNDYELSE
                     EQRQKLYHTMCQHLWQVNFTEINSKQYELPIPQQFQGKFGYIVKTSGGSTEISFELLS
                     ETHSTYLYPDSYIPEGGGDVMLKPAYIYLVIPDLVAMREPEVVGVSPLKLNILQKHLL
                     TPQKLQEQKPLNTKAN"
     gene            34311..34409
                     /locus_tag="PXF40_000529"
                     /pseudo
     CDS             34311..34409
                     /locus_tag="PXF40_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
     gene            34470..35258
                     /locus_tag="PXF40_000530"
     CDS             34470..35258
                     /locus_tag="PXF40_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801905.1"
                     /translation="MFLSHFKQVLNANIEADGKDWTIIDVFGGSGLLAHTAKREKPLA
                     RVIYNDFDNYAERLNHIKETNQLRQEIYQIVDEIIPKNKRISNEIKAKIINKINDFEG
                     FKDLKCLSSWLLFSGEQVATLDELFKHDFWHCVRQSDYPEATGYLDDIEVVSESFHQL
                     LPRFHDKEKVLLILDPPYLCTRQESYKQENYFDLIDFLRLIDLTKPPYIFFSSTKSEF
                     IRFIHYMVQNRKENWQAFEGAERIVVNASASYNGKYEDNMVYKF"
     gene            complement(35295..37733)
                     /locus_tag="PXF40_000531"
     CDS             complement(35295..37733)
                     /locus_tag="PXF40_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family igA-specific metalloendopeptidase"
                     /protein_id="HDL5801906.1"
                     /translation="MKHTFKLSLLATSIAISLSPTLLASIVRGDVDYQYFRDLAENKG
                     KFFVGATNIPVIDKTGKNIGTFLQVTPTKQVEVESNISPKPNVSLSECFDNESLPGCY
                     EFLYGGGDEDSNDLPVFETVTGETMSIPMIDFSSITRQTGIATLVNPQYVISVNHNQG
                     YRDIQFGDSSSEKADDHHYNYSVVRRNNYMPDPNKERTDLGKGIEKRERNDEGEKLIL
                     DGSGNPTPRWDYHAPRLSKLVTEVAPANEIERTTENVQDFYSVFSDPFIFPMFIRAGS
                     GRQAVVNNERDRLNNGRIEVGNGPFLTGGSVLPVTNGDPSVPGSDFNSRILVAKTENN
                     TINDVFKDHGYGPLTTLGLPGDSGSALFGYDVRTKKWVVLGVYSDYFSENNTLGGDVY
                     KSYWNYHHPHYVRALEKENNAGAINANGARLTWTPSGNTSSIVGGNAPLTVNLADTSL
                     PTLQGHNGNTGDNPWNPQLQHGKTFHILGENNTLSLTENINQGAGAIHFHGNTTVEGM
                     KAGITWLGAGVDIDKDKNVIWKISNPAGDRLSKIGQGTLTINGKGENKGSVSVGDGTV
                     ILNQQADENNKKSAFSELGIVSGRPTVILNSSDQMDPNNIYFGYRGGRLDVNGNDLTF
                     RRIQNSDEGAMVVNHNTAQTANITLTGIVSPTIDQVKVQAITSPDQVSRHLDKDIFTY
                     QRFPHLPTNFIRLKKPLSVAEITAIFNARKVFIDLDFATGLIRENEYFEVLKVTDESA
                     AKQQILAEKIKAAEGTVQGFNGYFGETDPSKTNGRLNITMNSNCSEPTKLRNATTKTT
                     KENRSFTFLILMVF"
BASE COUNT        11867 a         7502 c         8789 g         9641 t
ORIGIN      
        1 attcactata ttattcgttc tgtagttaaa tgatttacat catttaagta gtttctaaaa
       61 ctaactttca aggatctcac aaaatggcaa gaaataaaag agttcgagat atgagtaatt
      121 tcgaaattcg tggtgagctg atgaaaatcg gtaagtcctt atctcagtta ggtattgaga
      181 atggattagc aaaaaccaca gttcgtaatg cgttagataa gccatatccc aaaggggagc
      241 aaattattgc aaaagcgatt ggtaaaacac cgcaggaaat ttggccctct cgttacgaat
      301 aaggagcttt tatgaaggaa tggtttttag ccaaagaaat cgcaggatta tctggagttc
      361 cagaattacc gaatagcgtt tcaagattgg caaccaaaga aggatggcaa aaacgacaaa
      421 ttcaaggtgt aagaggtgtt acttacgaat accacctcac cagcctaccc attgaaaccc
      481 aacaacaact tagactaaac gccgcccttg cggtaatacc gcaagcggca gaactacaac
      541 ccaaacgaga cgaccccgca cttatcgcaa ggctcaataa tgccaccgat aaaggcaggg
      601 ataaagcaaa aggcaaggca gaagcctgta tgcagttgca agcctttctc gaccaagggt
      661 ttagttatac gcaggcagaa gcgggagcgg caaccgctaa aaatgtgtcg caaggttctt
      721 taaaaaattg gtactacaaa gtgaaaggtc accccgtcca tttatggcag gcgatcttaa
      781 tttccgaaag cggtaggagt aaaaagccgc agctgaaagc caagattact gaagaagcgt
      841 gggactgctt tttggcggat tacctccgcc ctgaaaagcc ggatttacgg gcaagttacc
      901 gccgaaccca agccatcgcc aagcaatacg gctggcaaat agcaagttta cagactttcc
      961 aacgccgagt gttggcggaa gtgccttacg aggtgatttt gctcaaacgg gaaggagcaa
     1021 atgcggttgc caagttagtg ccggcactac aacgcacggt gaaagatatt ctcgcaggag
     1081 aatggattaa cggcgatggc tatcaacaca atgtgtttgt gaaatggcac accggcgaga
     1141 ttgtccgccc taaaacgtgg ttttggcaag atgttcgcac ccgcaagatt ttaggttatc
     1201 gaacatcgat ttcggagaat actgacagca tacgccacgc attaatggat gtgattttta
     1261 acgtaggcat accgaaaacg ctcacgctgg ataacacccg agcagcagcg aataaggcaa
     1321 tgaccggtgg tattgaaaac cgctaccgct ttaaacatac cgagttagac ccgaaaggca
     1381 ttatgccgat tttagggatt gatgtgcatt ttacctcaat tctttatggt gaaggacacg
     1441 ggcaagccaa gccgattgaa cgtgctttcg ggcgaggcgg aattggcgag aaaatagata
     1501 aacgccctga attaagtggt ttctatacgg gcagaaatgc acaagaaacc cctgataact
     1561 ataacggcgg taaagacggt gtggattaca acacattctt gaaagccata gcagcaggga
     1621 tagaagagta caactctcaa accgaacgcc ataccgaaat gtgccgagga gaattgagtt
     1681 ttaaccaagt ttgggagcgg gattaccacc caagcaacgt aagacaagcc agccctgaac
     1741 agttgcggtt actgttctta caggcagaaa cggtcagcat taaacgcaac ggcagtttta
     1801 cgctgaaagc agccggcaaa ctttacggct taactaacgt ttactgggca gaaagcctga
     1861 tagggataac ggataagaaa gtagtggcac ggttcgaccc cgatgactta cacggcaacg
     1921 tgtatgtgta caacctagag gggcaattct tagccgaagc ggtttgccga gaggcgaaag
     1981 gatttggtga taccagtgca agccgtgagc aaggtcgctt atatcagaaa gtagtgaaaa
     2041 gtgccaaagc tcaagccgaa gcccttgaat tactggaagc tcacgaactg gcaagcctcg
     2101 ccccacaagt ggacgtgcct gagccgatag agaagaaggt aaaagaggtg ctggtgaaag
     2161 aagattttat cgtggatttc aacactgtgc gtaaagcaac ggtggtggaa gaaaccgaag
     2221 agatcagtat ttttgatgaa gtgttactga aacaagagaa acaacttcgc atagtggaat
     2281 aactagcggt cagtttttgc aaaaaatttg caaatttttc taaaaaaacg accgcttgaa
     2341 atgagattta aacagggttt aaacgccttt aaggagtaaa aaatgacatt aacagggcaa
     2401 gcttaccgag tgattttcaa ggaactcaaa gagcaacaag agagtgaatt tgaacaggct
     2461 ttcaagaaag ggattgccaa aattcagcag aatcaaactc aggaatccat tctggtaaac
     2521 cgtgatatgt ttcaagctga aaagctaaca ctgctttcac aaaagttgga agcggttgag
     2581 caattacttc gccttgaatt aaatcagccg aattttcaag caaaacttga agactacgct
     2641 gacgcattac gaacaaccat tttaagtaaa gtagccaaat aagagcttta gactcttgaa
     2701 ggcttaacat ctgagccact ttttttactg tcggcattat accgtcaaga tcatcaatag
     2761 aagttaaatg atgaaaagag gaatggtatt cagctaaaca aaaattgatt gtactaagtt
     2821 taaacaaagt aatgcaattt ttcatcacga tggcatttgc tcgttttaac ttaaaaccag
     2881 agaaggttgc acgagcagaa tcaagggcta tttgatgaat ttcatcatct gttaaagaac
     2941 gaaagagcat aaaaacctcc aaacaaaaac aggacaccat tatgacatta atcgaccaaa
     3001 ttaaacaaca catcgccgaa agcggcagtt ctcaggggaa agttgccaaa gaagccggga
     3061 ttaatgccgg ggcgttatcg gcttacctga atgaaaatta caaaggcaat aatgaagaac
     3121 ttgaagcaaa gctgattgct tatttagagc gtattgaggc gaagaaaaga gagtttgtcg
     3181 aagctccgag ttttattgaa accaaaaccg caaaccaaat tttcggttcg ttacgatttg
     3241 ctcaaaatac tggcgtgctt gccattattc acggtgcgag tggcgtgggt aaaacacaag
     3301 cggctagaga gtatcgtaaa cgctatgcga atgtatggtt ggttaccgca agcccttctc
     3361 gttcctcatt aagtgaggtg ttatatgaaa ttgctcttga acttggaatg aacgatgcac
     3421 cacgccgcaa agggacattg gctcgtttaa ttgttcgcaa aatgaaaggc acagcaggtt
     3481 tattaattat tgatgaagca gaccatttac cttacgaagc cttagaagaa ttaaggctgt
     3541 tacaagaaga agtagtgaat gaaagtgaca tcggagctgg tgttggctta gtgctgattg
     3601 gcaatgacaa agtctacacc cgaatgaaag gcggaattaa ccctgctcac gaatatgggc
     3661 gactttggtc acgcagtgcc aaacgcacca gtattcagaa aaccaaaaaa gaagataccc
     3721 aagcggtagc caaagcgtgg gggttgagtg aaaaccaaga agcactcaag gtaatgcaag
     3781 ccattactga aactggtggc ggattacgga ttctgacaca caccttacga ttagcagcga
     3841 tggtagcaaa agaccgaatg attcccttaa ctgccgattt aattcagctc gcacgtaaag
     3901 atttactctc aacaggagat taacaatgag aaccccaaaa cccaaacaca gttttaaccg
     3961 caccaaccaa gcagcgtgcc gttttttaaa acaaacccaa aaggcaatta tccgcttaaa
     4021 cagtcttggc tttacggtgc tgaatattga ttttacccgt attaagcccc gcattgaggt
     4081 ggaaatcggc aataacaagc acattgctca aggcttgatt tatgagggta aagcctaccg
     4141 ctacagcttc ggtaaaagcg aagatttagg cagatgggaa ggctactaca ccatgctgga
     4201 aggtatcaga gtgtggtggc gacaagcagc aattcactag gagaaaaaca gatgaaaacc
     4261 ttagcactat taaccgccct tttagggctt gtagggtgtg atttagtcca aagcaaacaa
     4321 gctaaaaatt acatcggcaa caatttaact gaaatctgta tagataacgt ggtgtacctg
     4381 atttattccg gtgataaaaa aggcggaatt accccgaaag taaataaaga tttttaccct
     4441 tatacctgta caaacaaaga ggaaagacaa aatggcaaaa cccgatgaaa cacccattac
     4501 aaaagcagaa tgtcaatctc agcttgcaga gttgggggtg caatataaaa aactgccaat
     4561 ggcaattaca agacatattt gtaatgccac aaccaatata cacggcaaag ttataaaggt
     4621 cagtgtggta gagagagttg gatatggcgt ccagattacc gcacaaggta acgagaaatc
     4681 ttgcttagta acctatgaag caatgttagg tatggcagaa gcaatgggat tatttgatga
     4741 agttaaggag caaaataatg actaaaaaaa caaccagagt aaaaagtgca acccaaagtg
     4801 cgatttatca aagccgagat gaagtgcaag tggctataaa aatcattggt gataaacagc
     4861 gtgaattgca acgtttagct acggcaatga atgatgaatt agctgctatt agtgccagtt
     4921 atgctcaaca taaccgctac caacattatg ccgagaaagc ggctgaagca gaacgcaaag
     4981 gcaactataa ggaagctcaa gaccattggg aagttgcaaa attatcagca aaaaagaccg
     5041 ctaaccgaga ctgggcggaa caacgagcgg aattttgtaa acgtatgcac aataaaccgt
     5101 tttaggggga agtgatgaca gaaaccgtaa aagcacaact taacagccaa ttaaatgagg
     5161 caattatcca gttgatacaa gctcaaaagt atttaaacca agatgatgcc attcgcagtg
     5221 gagtgtatat cggtacggtg caggatttat tgccaaaggt gcatttaaag ttattaacgg
     5281 caaatcgtaa acattgatag agatgaggta aaaatggcta ttacagaaga acaatggaaa
     5341 gaaattaagc aaaagctaga tagtatcata gggagagtta aatttagata caaagagcat
     5401 ttactcacgg tagatgttgt acaaattaag cgatctttaa aattggctgt gtatgttgat
     5461 ggggaaattg atggagcttg gacaaaagaa ggacacgaaa ttcgccctta tttagaagaa
     5521 gtttggtatc gcaaagaacg cccttttttt aatgctaagg agaagaaaga gtatagaggt
     5581 ttaatgagca aaaaaaaact gaatgaaaaa atagtaacct actcacctat gtttccatca
     5641 ccaactgcac tgactcgtca atataagaaa ctagatggct tagagttgat tgaagtgatt
     5701 taaaacccat ttacagccca tttaaccccg agttatttaa aggacaacaa aatgaataaa
     5761 aacgaatttt ttaagaaata ccacctagag ggttcactag ctattttgga tttggatgca
     5821 aatgacgatc aaagccaatt ctgttaccaa gcattgttgg agtatagaga actcccgtta
     5881 gacacatttc ttgcagagta ctcagatgat gaggatatga cagagtcaga gtttattgag
     5941 ttaatgcttg atgaattaga gtggattatc cgcagagcta agaatgctaa acggtttgtt
     6001 aaaaaacgac aaaaaacgat gagggaggaa attatgtaac agctcaaccc aaccaacgcc
     6061 acatcatccg tctagctgag aaacaggtgt ggcgtttgtt ttaagtgggc aatcaaaagc
     6121 gataacgttt ttaattgttt atttatcgga gtaacaaatg acagacaaag ccaagctaat
     6181 ccagcttatc catattgcca agtcgcaact agcaatggac gatttaagct accgtgaaat
     6241 gctgaaacgg ctcaccaata aaaccagctc gaccaaatgc acggtggtcg agttgcacaa
     6301 agtcttacac gaactgcaaa ccaaaggagc aaaagtaaaa tattttgcca aacgcagcaa
     6361 aaaaccgacc gcttacagcc cggcaacagg ggaaacagcg gtaaaaagcc aaattgctca
     6421 taaaatccga gcggtatgga taacaatggg caaacacgga tttttaaacg acccaagcga
     6481 aaaagcatta aatgcttata tgcgtaaggt tatcaataat aaaactagac caacaatatt
     6541 attaaatgtc tctgcattag aggctggaga tgcaagttat atgcttgaaa tcctcaaaaa
     6601 atggcataaa cgtgtgatga ttaaagccct aagcaaaagt tgcacagttg atccaaagat
     6661 aagctacgat gaattagtgg agtggtacaa tgaagttatg tagatgcccg atttgccaca
     6721 gtgatataca cctagaagct ctcgtagaag atgaagccgg gcgtgaacta ctcggcaaaa
     6781 tcagccaatt aacacacggt gttgctcaac cgatggttgc ttatttaggc ttatttaaac
     6841 cgcaaaaaag taaccttaat aactcaagag ccttgaaaat actcaatgat gtattagcac
     6901 tctacccttg ctcattgcta ctggctcaag ccctatctga aacggtagta agcatacgca
     6961 aaaaacgtca gcaagcaatg gaaaacgggc agaaaattga accgctaccg aaccataact
     7021 atttaaaatc ggtgtatgaa acgcaaaaag tccattttgc tgtggtgaga accggcaaaa
     7081 ccgaacgcga aacaatgaaa gccgaactgg aaaaaacacg caatgcgatt gcctatgtgc
     7141 aacggtttgt tgatttagga cgtgaagagg ttgttaaaaa tagccctgag tatcagattt
     7201 ggttagctca taaacccaaa taacacaagc caccaaaagg tggcttttta actttttgaa
     7261 agtgcgataa aacctgattt aaacaggctt taaacgggtt ttaagattga gtttaaaaaa
     7321 atatttcaca aaataagaat ggttttttat acaataaccg aaacggtttt tggataggaa
     7381 atagacaatg gaattagtgg atatttttga agaaaaagcc ccggaagtgt taaccgattt
     7441 agccaaacat attgaagtcg cattagaaga aaaatgccaa tttagccccg aaaaggcaaa
     7501 gcaaatcggt attgatattg cccaacaaat ggctcaaaac tggggtggcg aggtaattta
     7561 tattcctcgc aatttgttga tggctcttaa tgagcgagat atgaaaattt acgaagagtt
     7621 taacggtaac aatcaccgtg aattggctcg taagtacaat gtatcaatgc agtgggtata
     7681 taaaattgtg aagaaagtcc ataaggacga agttgcccgc aggcagatga gtatgtttga
     7741 gatgtaaatc attttttccc agccctgatc attttcaggg ctttttgtgt attaaaagaa
     7801 cgcagtcttt aaacccgttt aaaatcaatt tttcagcaaa ttctttaaac tccttttaaa
     7861 gcaattttaa taggagtgtg ctatgtctca aaatcttacc tttcgccaaa tttttgaccg
     7921 tttaatcgga cacgagggcg gctatgtcaa tcacccacaa gacccgggcg gagaaaccca
     7981 ctggggaatt accaaacgta ccgcggttgc taatggttat atgtatgcaa tgaagaatat
     8041 gacccgtgag caagcctacc aaatctacga aaaagccttc tggcaacgtt atcgttgtgc
     8101 agagcttaag ccagcagttg cttatcaatt tttcgacgca gtggttaatc acggttttgg
     8161 taatgctagt cgtatgttac agcgtgcagt aggcgtagcg gatgatggca ttattggcaa
     8221 tattaccctg caggcaatta atgcaaaatc tgaaagcgat ctcttaatgc tatttaatgc
     8281 cgaacgtctg aagttttaca caaaattacg caacttcccc acttttggta agggttgggt
     8341 caatcgtgtg gcaggcaatt tagaatacgc agcacaagat aatgaggttt aaaaatggca
     8401 aaactattta aagaactact ctcaaccaat ggcacattat ccaccactag caccgtgcag
     8461 ttttttggca cattgtgtgt atttggttta atggtttatg cagtaattac ccaacaacct
     8521 tatgccgaaa gcctattaaa taatgtgttg atttatcttt ttggggcaac taccgctaag
     8581 ggtgtagtaa ccagctatca agccaaaatt aaagggggta tccataaaca acaaagtaca
     8641 tttaaagagg aggagggatg ttaatgcaac aaattttagg cgtgattggc gtcatcgcag
     8701 caatattgtc ttatgctttg tttaaaagct ggcaactaaa acgtgagcgt aaaaagaatg
     8761 ccatattaca agctgaaaaa cagcaacaag cggttgaaat tgagcaaaaa aaagcagagg
     8821 taaaatatgt gtatatatca aagaaaaaca atgaaaaagt tactcgcagc tctgctagcg
     8881 atattgatga caagttgcag caacacggtt acttccgtga caacaacagg ttgcacggcg
     8941 ttcagtctga tttatccgaa ccgtgcggat acgctggaaa cgaaacgtca gattcttgct
     9001 cataatctga cttttgagga aatttgccaa aatgaaatac attaaaaaat tacgtaaacg
     9061 ctggcaaatt tggcgttttt taaaaaatca tcctgaggtt gcacaacgcc gagatttatt
     9121 agcgattgcc attaaacagg gcgtagaaaa ccctgtaggg cgtgcaagac ggagggagcc
     9181 ataatggatt tatttacagt cttttgggag tctatccgtg ctaactttgg ttttatttct
     9241 gcgttactca ccattgttgt tacggcattt tggctcaagc tagatagcaa atacgccaag
     9301 aaaaatgatc ttggtgaatt gctggaaatt gccaaaagcc acgataaccg cttaaccacc
     9361 ttagaaacca aggtagaaaa cctgccaagt gcggtggacg tggaaaagct gaaaacctta
     9421 gtcactgatg taaaaggcga taccaaagcc acctcaaagc aggtggatag tatcagccac
     9481 caactcggct tgttattaga agcaaaatta aaggaatgat atgtcgttaa gagatttact
     9541 cactcaagac caacggctgg tgattttacg ctcattagcg gaagccggct atgatgccaa
     9601 tgagtcaatt attagtgatt gcctagattt atacggtcac gatattagcc gtgatttagt
     9661 tcgcacccat ttaagttggc ttgaagagca aggcttactt accttagaac gtttgcgaga
     9721 tggctatatg gtggcaagca ttacccagcg tggcttagat gttgctcaag ggcgtgttgt
     9781 ggtaagtggc gttaaacgcc ctcgccctaa aatttaaacg gtatttaagg agcgtttaaa
     9841 tgagcgagaa aaatactcgt ggtcgagcat caaaagtcga tttactgccg ccgaatatta
     9901 aaacccaact ggcgatgatg ttgcgtgata agcagtactc tcagtcacaa attttagaag
     9961 aaattaatga cttaattcgg gattgtggct tgcctgatga aatgctgtta agcaaaaccg
    10021 gattaaaccg ctacgcaagc cgtatggaac gcttaggggc aaaaatccgt aatgcccggg
    10081 aagttgccga aatttggact aagcaattcg gcgaaatgcc acaaaccgat attggcaaaa
    10141 ccctaatgga aatggtcaag caaattgcct ttgaaacctc attgaaatta ggcgaacaag
    10201 aaggcggtat tgagccaaaa cagcttgctt tgctctcgtc tgctattcaa cgtttagaac
    10261 aagccgaaag tttgagtttt aaacgggaac aggcaatccg taaagaggtc gcacaacaag
    10321 ccgctgaaac cgctgaaaaa gtggtggtgc aagcgggttt atccgctgaa accgtccgta
    10381 cgattaaaga gcaaatttta ggaattgcat aatggcacta ctcaataaca gaccgctgaa
    10441 tgaattagcc cctgaatgcc gttcgttttt agagagcatt cacgctttta atcctaacga
    10501 actgttattg ggctatcaaa agcggtggat tgcggacgac agccaactca aaattgccga
    10561 aaaaacccgc cgttgcggtt taacgtgggc agaagcagca gataacgcct taatcgcaag
    10621 cacccgcaaa tcagacggtg gctctgatgt attttacatt ggctcaaata aagagatggc
    10681 acgtgaatat atcgatgctg tcgcaatgtg ggcaaaagcc tttaatcgtg tggctggaga
    10741 aatccaagaa gagatctttg aagacgaaga taaagacatc ttaacctatg taatctactt
    10801 ctcatcgggt tttaaggtca aggcattatc cagtaatccg aaaaacctgc gtggtatgca
    10861 gggcgtggtg gtgattgatg aggcggcatt ccacgaatac ttagcggaag tcttgaaggc
    10921 ggcgttagct ctcacaatgt ggggggcgaa agtccgtatt atttcgaccc acaacggctc
    10981 ggaaaatctg tttaatgaac tgattaccga tagccgtgcc ggccgcaaac gctactctgt
    11041 gcatacgatt acgattgaag atgcctgccg tgatgggcta tatcaacgta tctgccaagt
    11101 agtgacgaaa aaaacgtggt caccggaagc agaaaaagag tggattgaaa acctactcaa
    11161 cgacaccgcc agcgaagaag acgcattgga agaatacttc tgcgtaccga agttcggctc
    11221 aggcttatgg ctctctcgtg ctttgattga acggcagatg agcgaagcca cgcctgttat
    11281 ccgctttacg gcaaaagatg gtttcagcct tgtggctgaa ccgacacgct atgcggagat
    11341 tgccgaatgg tgtgaattag aacttgagcc gatattggca acccttaacc ctgatttgtt
    11401 gcattttatg ggcgaagact ttgcacgcag cggcgatatg acctctctgg tggtgcttgc
    11461 tcagcaacaa aaccttgttc gtaaagtcgc ctttattgtt gagcttggca atatgcccta
    11521 caagcaacaa gagcaaatcg tgatgtttat gcttaaacgc ttaccgcatt ttgccggtgg
    11581 ggcttttgac gcccgaggca atggtggcta tttagccgaa gctgcacgag atgaatttag
    11641 caccttgatt gactgcgtgc agttatcgga aaaatggtat cgggaacaca ccgccccctt
    11701 taaagcggca ttggaagacg gcgagctgga agctattcca aaagatgcgg atattttggc
    11761 tgatttgcgt tcatttcagg tggtgaaagg cgtaccacgc ataccggata aacgcactaa
    11821 aagtgcagat gggaaaagca aacgacacgg tgataccgca atttctttgc tgttggctca
    11881 ttatgccagc cgacaattag tgcaaatgcc agttgagccg gtatcacgcc gtccacgcca
    11941 tagccaacaa ttaacagaag gatattaaca aatgagatat gtaccacttt gtttaatgat
    12001 gtgtgcctca ttctacctat ttattaacaa cattgacggc tggggttggg gaattctttt
    12061 atcttttatt ttagcgagtg cagcttatgg caaagaagaa taatttaatt agtgaaattg
    12121 ccacccgtgc cagaagtatt gattactggg catttggcta ttatctgccg aaccctgacc
    12181 cgattttaaa acgaatgggg aaagatattt ccgtttaccg tgagttgtta tcagacgggc
    12241 aagttcgctc aggcgtacgc cgtcgaaaag cggcgattaa aggcttagag tggcgaatta
    12301 ccaccactaa caatgagaaa gtggacgagc agatttatca aatatttaac cgcttgccga
    12361 tgaataacct gattaccgaa atgctcaatg cagcactcta tggctaccat atcagcgagg
    12421 ttatttgggc aaaagagggt gagttatttg tgccaacaga aatcattggt aaaaagcctg
    12481 aatggtttat gtttgacgac gaaaacctac tgcgtttccg taccaaagaa aactgggcgg
    12541 acggcgaatt attaccagat gataagttct tgcttactac gcaagaagcc acccaagata
    12601 atccctacgg tttaggcgat ttatccctct gcttttgggc ggcgaccttt aaaaaaggcg
    12661 gtttcaaata ctggttggaa tttaccgaaa aatacggctc accgtggttg attggcaaac
    12721 accctcgcca agctcacaat acagataaag agcgactagc tgatgcccta gagggaatga
    12781 ttagctcagc gattgcggtt atccctgaag atagttcggt cgaaatcaaa gatgcagcgg
    12841 gcaaatctgc cagcaccgat gcctttgaaa agttcctcaa tttttgcaag gcagagatca
    12901 atatcgccct acttgggcaa aaccaaacca ccgagcaaga aagcaaccgt gccagtgcac
    12961 aagtaggctt ggaagttatg gaagatattc gctcggacga ccaagcgatg attgaagcca
    13021 ccttcaacac cttgttgcag tggattgtga aatataactt caatgtggaa caactgccga
    13081 agtttgaatt ttacgagcaa gaagccatca acaccgacca agttgaacga gacagtaaac
    13141 tccacgcaat gggcgtgcgt ttttccaaag cctactttga gcgtgaatat ggctttgagg
    13201 cgggtgatat tgaggtgcaa gcggtcgaaa aagcggaaaa atctgcaaat accacagaat
    13261 ttagcgaagg acaacgccga acccaagtgc caatgcctgt gccaattttg gaacagctag
    13321 aacacgaggg agaagcaatg gtggacgatt ggctacaagg ggtgagagat aaactcgctc
    13381 aagcagatag tctggaggat ttccaaagtc agctagatag ccttatccct gaattaagct
    13441 ttgccgaata tggcgagctg ttggcgttag gctcaacggt ggcagagctt gcaggcagac
    13501 aatcggtaaa cgatgaaatt aaggcaaaac gcaatgcgta aatttacctt taaacagcaa
    13561 gcccaatatt ttgagaaaaa actcaatctc cgcacgaata gctaccttga tattctgggc
    13621 gaagagcacg actatttttt cgtggtggct ggggcgaatc gtaatgaagt gttgagtgag
    13681 tttcgcaagg cggtggatga ggctattcac aacggcgaaa ccttagagaa ctttcgcaag
    13741 cggtttgatg aggttgtggc aaaaacaggc tgggagtaca acggcggacg aaattggcga
    13801 acacggatta tttacgatac caatgtttac ggggcgtata accgtggacg tttgcaacaa
    13861 catttagagc ttgcggagga tatgccttat tgggaatatc aacacaacga caacgcccac
    13921 cctcgcccac agcacgtggc gtgggacggc ttggtgctgc gttatgacga tccgttttgg
    13981 aaatatcact atccaataaa agcctacggt tgccactgca ccgtgcaagc gttagatgat
    14041 tttgacctca agcacgatgg taaaaccgtc agcccaccac ctgaaattga gtttgaacaa
    14101 aaaacggtag gcgtgcggac aggcaattca cgagtcgtaa ctgtgccgaa aggggttgat
    14161 gtgggtttta caccgcataa ttttgataat ctcaaagccg ggagagcagc aaatgtagat
    14221 aagttgctaa tgcaaaaaat ggttaccgcc gatcctatat ttgcctccaa agcagtcagt
    14281 gatttattgg caaaagagcc ggttgcaaag ttacataacc aagcctttaa aaattgggta
    14341 aatgatgttg ccaatgctaa aggaagtgca ttatcccaag tagagaatat gcagttgtta
    14401 ggggtactac ctgttgcggt gattgaacgg ttacagcaga tcaatttagc tccgcaatct
    14461 gcaattattg caataacaaa aggcgatatg gtacacgctc tacgagagct aaaacaaaat
    14521 accggtattg ccgtaccgtt ggaattttgg gaaaagttgc ctgcaaagtt acaataccca
    14581 aatgccatct tgttggaaaa acaacaagca gaaactacat tgctctttat ctatgacgta
    14641 gctcaaacca aaattgccgt aaaagtcaat tatgatgcaa ctttacaaga tagacacgga
    14701 gcaaaaggac ggcagaaagt cttactgaat cgagcggtta caggtagttt attccaagat
    14761 acaactggat tgaaaagttc aaagtatgaa gtgctattgg gagaaatgta gcggcgaagg
    14821 actcgaacct tataatgtag gttaaaccta caacctttac caattaggaa actaccgcta
    14881 cattgtgtaa attcactata cccctaaatt attttttaat caataggaga aacaaaatgg
    14941 cagaaaaaca actttccttt aaagtagccg aaatagtgcc aatgtcagct attaacacta
    15001 tgcggcactt aattagtttg gcattacaag cgaattatga gagagaaaaa tctcgtgctt
    15061 gataatttca atggcttgta gttcgggaac tatattatct gaaacaagcc attgttttgt
    15121 tgatgtcaga catttagcga tgaaatccat aattaaacca ttagcagtag ctcgttgttc
    15181 cggagtaagt tgtaaccacg acgcctctgt ttgttggtct aatgtataaa gaaacataac
    15241 ggcttctttt tctgataatg ggtcaagtgg taatttttca gcttttgtga ctaaccattg
    15301 acgggaaagc aataaatcat aaaccagttc tattgcttgt tctgcattta ccatcatatt
    15361 ctaattcctt aatatatcag ggcaacatta cccaatctat attttactga gatttgctta
    15421 atgatcaaaa tcaccctcaa caacacccaa gcggtcaaat cgttacaaca aattgcaaat
    15481 cagctggaac aacctcgccg actgtatggc attttagggg aaaccctaaa gaaaattcac
    15541 actgcacgct ttaaagcgga acaagacccc gatggcaaca attggaaacc gttagccagt
    15601 agcacgcttg ctttaaaacg taaacgaggt aagtccacta aaatcttacg gcaagacggc
    15661 taccttgccg ataaaacggc ttacaatgtt acaagtgata atgttgagtt tggctcgcag
    15721 gaagtgtatg cacggttgca tcaattcggc ggtaaagccg gacgaggcaa aaaagtgact
    15781 gtaccggctc gcccgtggtt aggcgtaggc gataaagatg agcagttact tttacgcaaa
    15841 gctgagtggc atttagggca aattatcggt cgtatgggaa aataaccgct taaaatcaaa
    15901 tttaacgcat aaaaacgcct ctgtgcgttt ttatttttta ttcgcctgat tattcgactc
    15961 aaaaaattta aacgctgtta aacgcattta aacggtattt aaacggtatt gccgattgtg
    16021 ataaatcctc tttattaaaa caccctcgaa aaatctttaa accagtttaa aagctaattt
    16081 ctctccaaat ccttattatt gccccatcac ggaggcaata tgacccaaat tgaaattttt
    16141 aaagccggta agcgttatga cgccaacggc acgttaattg acattacccc tgaaatgttg
    16201 caacagaccg ttgctgccta taaccccgaa tttcacgaag ctccgctggt gatcggacac
    16261 ccgaaatcca acaaccctgc gtgggggtgg gtaaaagccc tttcccttga gggcgatgta
    16321 ctaaaagcag aagtagatca gctagacgct gagttttcag aaatggtggc aagcggcaaa
    16381 ttcaaaaaag tctcggctgc tttttactta cctgatagcc cgaataaccc acataaaggc
    16441 gtgttatcgc tacgccacgt ggggttttta ggggcaatgc caccggcggt taaaggctta
    16501 aagcaggtgg aatttgcaga agatgatgat tttgtcgtct tttctgaatg gggggttgca
    16561 agtctattta gtcgttttcg tgattggttg gtgagtgagt tcgggcttga aaaagccgat
    16621 aaagctcttc ccccacacga aattgattgg ctgaaagaag aggcaatgcg aagccaaatt
    16681 agcaaacagg tacacgccga acaggcaaca cctgaaccga tttttaatga acccgcacaa
    16741 ccagaaggag aacctgaaat gagtgcagaa gagaaggaag agcttgaacg cttaaaagcg
    16801 gaaaacgagc agttgaaagc cgaaaaagcc caagccgaag cagagaaaat ggaagcagag
    16861 ctggaagctg aaaaagctgg taatgcagag ttttgtgaag gtttagtcaa gcaaggcaaa
    16921 cttgccccgg tggcaaaagc ggcgtttgtg caggctttaa ataacctttc agtattaaaa
    16981 gccggtcgtg agccggaatt taatgagggc gaagatgtgg tttcacagtt taagtctgca
    17041 atgtcgcaat caccacagat tatccaattt ggagaatatg ccacagcaga taaagccaac
    17101 ccacaagaag cggaagcagt ggaatatgct gaaggcacag atccagtttc gattgaagcc
    17161 gaccaaaaag tgcgagctta tatgaaagcc cacaatgtag gctacgctgc ggcatttaat
    17221 gcgatttatc gctaatgttt aacccacaac tgaaaaggaa tactaatgac aactcataac
    17281 ttacaaaaac tgcgtgtaca agaccccgtt ttaaccgagc tggcacaagg ctatcacaat
    17341 aacgagctgg ttgccgagac cttaatgccg actgtcgaaa tcgaaaagga agcaggcaaa
    17401 atcccaactt tcgggcgttt agctttccga ttgccttcta ccgtgcgtaa cttgcgtggt
    17461 tcatctaacc gtttagatcc agaagatatt ggggcgattg atgtggcgtt agaagaacac
    17521 gatgtggaat atgccattga ttatcgtgaa gagaacgaag ccattttttc tttacgtcaa
    17581 tttgccttaa ataccaccca agatgtgatt gcgttaggtc gtgaaaaagc ggttgcaacc
    17641 ctcgccttag atgaaagccg ttatgaaaca gacaataaag tcacgctgtc cggcaccagt
    17701 caattcagcc ataaagatgc tgatgtgttt aaggtatttg ataccgctat tcgtgccgtg
    17761 aagcgggcta tcggtcgtaa accgaatgtg tgtgtgattt ccggtgatgt gtgggcagcg
    17821 ttaaaagaac atccggcagt ggttgaaaag ctcaaataca gtcaagtagc gattgttacc
    17881 cctgaggtgt ttgccaaact gatcggcatt gagaccgtaa aaatcggtga agcggtgtat
    17941 gaagaaagcg gtcagctcaa agatatttgg agcaaagata ttgtggtggc gtatgttgct
    18001 cctcgttcga ccggaggcaa aggcacggtt tacgagccgt cttatggtta cacggttcgc
    18061 cgtcaaaaag gcttatttgt tgatacttat aaagagagtg gcggcaaaat tgaagtggta
    18121 cgcacgaccg atattcacaa acctcattta gtgggtgcgg cagcaggcta tttaattaaa
    18181 gctgccgtat aagccacata ccatagggtg cgtttactaa cgcaccatta tctcaaacac
    18241 attacataga ggaaaaaacg atggctaaat ttattgtttt acatacccca attttacacg
    18301 atggcaaacg ctatgaggtg ggggcagaaa ttgaactcac cgctgaacaa gctgagaaca
    18361 atgcgatcaa cttaaaagcg gtagaagctg ttccaaaacc acctaaaaat gcctcaaaac
    18421 ctgaagatga gccaaaaccc gaaggtgaac ctaagcctga agatgcagtg acggaagatg
    18481 atgtgaagct ggctgaagca aaaattgcag aagcagagca accaaaaggg aataaaaaat
    18541 aatgtatgtg cagattgatg agctactcac ggcgtttagt cgcaagattg tggtgcagct
    18601 cagtaatgat gaaccgacag cgaccgagcc tgatttaaag atgcttgaaa cggcagttaa
    18661 agtggcaaat gagcgaattg atgcagcgtt acgctctcgc tataccttgc cgctggctga
    18721 tgtgcctacg cttattaatc agcacgcatt aacccttgcc cgttattggc tttatgcccg
    18781 ccgtcctgaa accaaaatgc cggacaccgt gaaggaaacc taccaacaag cggtgaaaga
    18841 gttggaacag attgcaacag gcaaactgca tttaggcatt gctgaaagca gtcaaatttt
    18901 agaagacgat gttttagccg ataacagtga atatgaagtt cgggcgaacg ctcgcattga
    18961 taccagtcgt tattaaagat tatgtcagcc acacaaccga ttttagaaga tatttgccaa
    19021 cacttgcggc aagcattgcc cgagtgggag gtggaactct tcccgaatga cccaagcacc
    19081 tatcatctct cgcacattaa cggtgcggtg ttgattagct atttggcaag caaatttgag
    19141 aaacctcgca ctacacaagc ggtgctgcag gttcgccacg ttcagattgc tttaacggtg
    19201 ctgacccgtg atttgcataa tgatgtcggg gcgttggatt tgctggataa attgcggtta
    19261 ttggttgtgg ggtttaagcc tcaaaactgc ggtgagtgtt ggttgattga tgaatttttt
    19321 aatggctcaa gcgaagaaac cgggctttgg caatatcagt tgattttgca aaccgaaact
    19381 cagcaggtgc aacaccaagc ggtcgaaaat ctgccaaaat ttgtaaccgc tcatcttcgc
    19441 cgtcaagacc agcctggttc gcccggactt aaaacttaaa tcgtagggtg cgtttgctaa
    19501 cgcaccatca acatcacctg attttacggt gcgttggcaa acgcacccta caaggagaat
    19561 attatgacgt ttcaccacgg ttctgaaacc gaacgagtaa acggtggctc tgtgccggta
    19621 tcggtggttg atagtgccat tatcggcatt gtcggtactg ccccaatcgg cgcagttaat
    19681 gaattgaccg tctgtttaac caaaaaagat tttgccaaat tcggcacgat tttaaaccaa
    19741 ggcttcacct tacctgatgc ctttgatatt ttagctcgtt acgcagcggg taaagtgtat
    19801 gtggtgaatg tgcttgaccc ttcccgccac cgtactaccg tgaccgatga agtcctcaca
    19861 ctggatcgca atacgctgac cgctcaaaca gcgaaaaccg gcattattgc ggtgacgaga
    19921 gtgaaagacg gtgcaaacgt gctgaatgct gatcggtatt cggtcgatct gcaaaccggc
    19981 gtggtgacct ttgtctctgc accgtctgcc ccgaaaatta gctatatcta tgctgacccg
    20041 agcaaagtga ccgaagagga cattaaaggc ggggtggata gcttaaccgg taaacgcaaa
    20101 ggttttgaac tattgcgtga tggttttaac ctttacggtg cggatgccaa aatcttaatc
    20161 tgtccggaat ttgataaaac cgcaagctgt gccgctgccc ttgccaccct tgccgaccaa
    20221 ctgcacgcta aggcgtatat tcaactgccg aaagggacga gcttatcaaa agctattcaa
    20281 ggacgtggcc cggcagggac gattaacgcc tcggcaagca atgagaacgt acgccatttc
    20341 ttcccgtatg cgttggggtc aagcaatact cttgaaagcc ttgcgaccca cgccgccggt
    20401 ttgcgtatgt tgattgatgt ggagaagggc tactggttca gcacttccaa taaagagctg
    20461 aaaggggtga tcgggttgga aattccgctg acggctcggg tggacgataa gcaaagcgaa
    20521 actaatctgc tcaatgcggt agggattacc accattttca atagttttgg cacaggcttc
    20581 cgcttatggg gcaaccgttc gtctaacttc ccgactgtga cccatatcag caactttgaa
    20641 gtcgcctctc gcacaggcga tattattgat gaaagcattc gccaagccga attgcagttt
    20701 attgatttac cgattgatga tgcgttgctg gatagcttcc ttgaaaccat cgacactttc
    20761 ctgcgtacgc agaaatcgtt ggtaggttat tcggtgagct tagactatga atatgacttg
    20821 gttgatgcat tcagccgtgg gcaagtcccg attgtgtatg aatacactcc taaaattccg
    20881 ggtgaacgta tcagcaataa atctgtgatg acccgtaaat acttggcaaa cttggtgtcg
    20941 caacgataag gggaaataaa tgagtattgc aattaaccaa attgtaaacg gaaatgttta
    21001 cattaacggc aacagccaaa tggggcgagt gaatgaggtc aaaatccccg atattgagtt
    21061 tgaatttatc gaacacaaag gccttggaat gcacggtgtg attaaattac ctgccggcac
    21121 gaatgcgatt gaagcagaaa tcacttggga cagtttttat ccggaagtgc gtgcggtaat
    21181 gcttaatccg tataaataca ctcagttgca aatccgctct aacctgcaag tgtttaactc
    21241 gcagggcttg gcagccgaag agccgatggt caccattatg aatgtgtctg ccggtaaaat
    21301 cggcggcaca gggcataaaa acaaagaaaa tgccgaattt gccgacacgt taaatgtaca
    21361 ttcaattaaa cagaccgttg ccggtcgtga gctgttattt attgatgtgc tggcgaatat
    21421 ctaccgtgtg aacggggtgg atgtgttgca aaaattccgc accaatatcg gttagtaaaa
    21481 tctttaaagc cgtttaaaat caatttaaac accgtttaag taaactcctt tgtgaagtta
    21541 aacaacaacc actcacaaag gagttttttt atggctaacg cagctcaaca agtattaacc
    21601 aatcttcgtg tacaaaccac ttataaattg caatacccta tcgctttacc agatggtaga
    21661 gttattgaaa ccttagatgt acgtcgtcca aaaggtaaag attttcgttt gcttgatgaa
    21721 aaagggtttg accctgaaaa agatggcgta aaaattctac gcttctatat tcaacagctc
    21781 accacacttg tgccggaaga tattgatgaa ctcgatgctg ccgatattaa gggcttaaat
    21841 aacctattgg aagatatgct tattgaggga aagtccgaca aataagtgaa ctagataccg
    21901 tttatgctga tctcgcttgg tggtttaagt tttcaccaag cgagctttta gaattggatt
    21961 tagtggatat tccgaaatgg gtagaacaga tgaacaggca aataaaagcc ggttatgggc
    22021 agattttacg gtagagccaa ataaagggtt cggtggctaa agtaagtaaa atggcgacgc
    22081 cccaagctag atacacacca acccacgcca agattgtcaa aatcaatcca taaatgagta
    22141 caaaactaac gccctcgctt aggctttgta tagattgaat cgcatctaac cagtagaaga
    22201 tactccaacc gactaatgct accgctaaca accatttagc ggtgcattct gttcttgtta
    22261 cacaagcctc gaaaccagcc cactcagtaa ttcgattatt taatttagtc agcatacacc
    22321 acctccttaa actttcccta ttttacgcta aggatttaac caatggcaaa taatttagct
    22381 atcggaatgg taattggtgc aagcctatca tcaggttttc acggtgcttt ttcaggagca
    22441 aagaaaaagc tagaacaatt agaacaggct gtcgctaaaa atcagcaaag ccattctaaa
    22501 ttaggttctg agcttactgc attgcgtagt aaacaagcta ctctctatgc agaaatgagc
    22561 cgagccagta gtaaaggtgg tgctgggctt gctcttatgc aacaggaata taaaaaaatt
    22621 ggcaaagaaa ttgccaatat tagccgagag caacgcaaat ggagtacaga attagaaaaa
    22681 tctattgcta agcaaactaa attacgcaat gcaatggaac gtcatacaca agctaaagaa
    22741 aaccgagacg agcttaaagg gaaaataatt ggaacggtag cttctgcggc aatgggtgtc
    22801 ggcgtgatga aaacctatat ggagcaagaa gaagctgcga ataatcttaa aatttcaatg
    22861 ctgaaagcag atggttcttt cgggaaattt gaagagattg gcaagattgc tgacacatta
    22921 gggacagatt taccgggaac aaaaaaagat ttctacaagc tcgcaatggc attaaagaaa
    22981 caaggtgttt ctgatgatgt gctgaccgga ggggcattaa aaacttctgc cgaactgaat
    23041 gtcttgcttg atatggatca ggaaagtggt ggagagtttt tagcgaagtt tatggaatct
    23101 caccggctca atgaaaatga gttaccacaa gcagccgatt atctgcaacg agcaatgttt
    23161 gccggcggtt taagtaaaga gcagatgtat gaatcgatga aatactatgc tccaaaactg
    23221 aactcaatga aacttacagg ggctgagaat accgaaaaag tgctggcgat tgaagcaatg
    23281 gcaggtcagc aaggcttaga gggttcaacc tttggtacgg gcttaaatat gatgttaagc
    23341 cgtatgaata aaggaccgga aatgctcaag gcagcagcca aaggaatgaa agccgaagct
    23401 cgagagatga tggaggctgt cggagtagaa tttaatttct gggataaaaa cggctcattc
    23461 aaaggcattg atggaatgct ggctgaaatg acgaaatttg aaaaaatccg caaaaaattc
    23521 ggtgacaaag gtgtaggttt agttgcagaa gagctgtttg gcattgaagg tgggcgtctt
    23581 gctgatattt tggctatgaa aggtcaaaaa ggcttagatg aaatgctgag taaaatgcgt
    23641 gaacaagcca gccttcaaga tcgcattaac cttaaaacaa atacattagg tgctgcccta
    23701 gaatctttag gaggagcgtg ggaaaccttt gtgggggata ttggctctgt ctttgccgaa
    23761 gatataaaag ggttttcaaa aggcttgcaa tctgcggtgg aatggcttgt gccatttgta
    23821 tcaaaacata aagaggcgat taaatttgta ggtggtttgg ttgctggact tgttatttta
    23881 cgaggcgttt tacaagctgg ttcttttgtt attcaaacgg taactatggc aatgaacgcc
    23941 ctcaaaattg cagcaatgac caatcctatt gtcttagtca ttggagcaat cgcagcgggt
    24001 gcttacttga tttatagcca ttgggatagc attgcccctt ggtttgcaaa tctttggcaa
    24061 aatgtgaccg cttacttcaa tcaattttgg acttgggtaa aaggtgtttg gtcgggcgtg
    24121 acggactggg tgtcttctgt gtggaatggt gtagccactt ttttcgggca gttatggact
    24181 acgattacta gcttatttag tgtagcttgg acaaatatcc aaacaatatg gggaggagca
    24241 acagcttggt tctctggttt atgggatggg attaagtctg cggcttttgg tatgttcgac
    24301 agtattagcc aaaaagtcag ctctgttgta gcaagcatta agagcttttt aggctttggc
    24361 gatgatgtgg ataaaatggg ggcaaaaatt ggcaatgtag ctacccaagt catcagcaaa
    24421 gaacactcag gacaactcag caaaaccgca gatatggcag ccaatacagg gttctctagc
    24481 ggtggtttca ccgggcaagg cggtaaatat acccctgccg gtattgtgca taagggcgaa
    24541 tatgtgatga cgaaagaagc gacctctcgt ttgggtgttg gaatgctgga tagcttaaac
    24601 tatggcggtg ctatgggttt cactcaacct gttttgcaac cgattttagg taagcaaaaa
    24661 ggcttttttg gctcactttg ggacgatgtg aaattcgggg caaactttgt cggcaatctg
    24721 cttggcttaa atcaaggcag cctgaaaacg cctgatttta acccaaatgc gaccaatgca
    24781 agcggtcaaa attcgtcgat ttttagcaat tatgaaccac tcaaccgaaa tgcggtaaca
    24841 cagcaggaaa gctcgcaagc accgcagata gtcgtgaact ttaacccgac aatcaatgta
    24901 aacggtaatg ctacgcaaga ggctcaatcg caaattatgc agcagttgca aatgagtgct
    24961 tatgagtttg agaaattgct caatcgtgtg ctagaccaac gaagccgtag agcctattag
    25021 gagtgattta tgtattttat gttaggcaat attgcctttg agccggtgaa tttaactgaa
    25081 tttagcgagc aacataccgc cgaatttgcc gaacacgctg tgctaaaagg caaacctcgt
    25141 ttacaagcga tgggcgaaaa gctaaatgaa cttaattttt ctcttcggtt gcaccatacc
    25201 ataggcggtg tagagagccg ttatcaagcc ttgcttgaag ccaaagcgaa gcaagcggca
    25261 ttggcgttaa tttggggcag tcgttataag ggagattatg taattgtcga tatttcatcg
    25321 accacattgt tcaccgatgg cagaggcaat gccctcgctc gtgaaatgca aatcagcctg
    25381 aaagagtttg tgggcgataa tgacggtggt gtgttgggtg aggcgttaaa ttttggtggt
    25441 ggctcactgc ttggctctat tttgccaagc ggtgcggtaa ctaccctatc tcaaatcaaa
    25501 acagcagtca gccgaggtgt ggagctttat aacagcggca aacgcttagt tgacgaagtg
    25561 caaaataccg tggcgattat tcggcagttg aaaaatgacc cggcaactgc attggcatat
    25621 ttacccgctg cattagcgaa tttagacggg gcattggggc attttggtaa tttgaccggc
    25681 tcatcggcga ccttgggcgg tttgcaggag aaactaccgg cagcagtggt ctttagcgag
    25741 gaaatcggcg agatttatca gagtttgcaa acaatgcgaa gcagtttggg taatgcctcg
    25801 gcaaatagct gggataattg gtttacaccg gcagagagtg cattgacaga ggtcacagac
    25861 agctttgacc atctagcaaa accggtggca aaaatgaccg cttggattgt gctgcgtacc
    25921 gatgaggagg cagaaaatga cacagttgct taaacatatc gtcaaacagg gtgagcgttg
    25981 ggataacttg agctatcaat actacggcaa tgcgtttgaa tatggtcgaa ttattgatgc
    26041 caatccgcat atcggttttt gcgaggtgtt gccgataggg gtaacaattt atatccctgt
    26101 acttaacgtt aagccaacga ataatgaaaa tatgccaccg tggctaaggg ggcgtgatgc
    26161 gtaatgtacc gaagcccgat ttttcactgt tttatgaaaa aaccaatatc actgccgaga
    26221 ttgagccaca tttggtgcaa ctgacctata tcgaccattt ggaaggtcaa tcggacgaac
    26281 tcactgtgga atttgaagac attcaaggca aatggatacg ccaatggttc ccgactcagg
    26341 gggataagct caaagcggcg attggctatc agggcgaatt tctgacggac atcggtgagt
    26401 ttgaaattga tgaagtggaa tatagttata agccttccac tattaactta aaagctctaa
    26461 gcaccggtat cagcaaagcc aaccgtactt taaaaccgaa agcctatgag aatacgactc
    26521 ttgctcaggt ggtggcaaag gtagcagata acctgaaatt aaaggtagtc ggtaagatta
    26581 aggctatccc gattaaacgg atcacccaat atcaagagcg ggacgtggag tttttggcac
    26641 gccttgcccg agagtatcat cacagcttta aaatcgtggg caatcagctg gtctttaccg
    26701 ataaaagcga actggggcaa agtgagccgg tgttaatgtt ggaagaacgg gatactattt
    26761 ccctacgttt gcgagatcgg attaaagaca ctgcaaaggc agtggaaatc agcggctatg
    26821 atacaagcgg taaaaaagtg gtgaaaaaac gcaaaaaggc aaaagcctta cgcccgaata
    26881 taaaacaagc taaatcagcc agtgaagata cgctgaaaat catcacacga ggcgaaagtc
    26941 aagaacagat tgatgcacgg ggtgaggctg cgttggctac gcaaaatgaa gatcaggcgg
    27001 ctggtgatat tgagcttatc ggcaatccta aattggttgc cggagcaacg attttattgc
    27061 gtaactttgg cgtgtttagt ggcaagtatc tgattaaatc atcacgccat acgattagcc
    27121 gtagcggtgg ttatactact catattgagg tcagaatgtt ggagtttatt gccgatgatt
    27181 taatcacatt aggtatggag gctggcaatg caaacgcata attttggggc gacttatcaa
    27241 gaagggattg tatccgctgt tgatccgaaa acgcacaaag tgcggtgtaa aatccctgcg
    27301 ctggaagatt tagaaactgc ttggctgtcg tttttgaccc cgaacgccgg tggcaatcag
    27361 ttttactgtt tgcccgatgt gggcgagctg gtggcaatgc tacttgatgc acaaggcgaa
    27421 ggtggctgtg tgtttggggc aatttataac gagcaagacc cgacaccggt tgccgatagc
    27481 gatatgtggg ttaagaaatt cagcaatggc acggagattt cgcataatcg caaaaccggc
    27541 gatgtggtag tgaagactaa cgggcattta accgcaacgg ctcaaggtgg ggctacgatt
    27601 aatgcaaaca ccgtagtcaa tggcacattg cacgctaccg gtaaaatcac ctctgacgaa
    27661 gaagtctctg ctcctgttgt gaaacaaggc acggtagagc ttggcacaca taaacacggc
    27721 ggtagccctg aacctaataa gtaattcttt aaaccagttt aaaatccctt ttaaagatag
    27781 ccctgtatca tcagggctat gaacagacaa acttccattc aattaaccca ctggcaactt
    27841 gcaccctcaa ccgatacagt tgaggtggtg caaggtattg atgatattca tctttgtatt
    27901 gtcaatatcc tttcaaccca aaaaggcacg gatattttac gccctgaatt tggctctgac
    27961 cactttcgct acattgacta ccctgaagat gtggctatcc cgaattttgt acgggaaatt
    28021 acaaccgcct tgcaaaaatg ggaaaaacgc attgaggttg aagaagtatt ggtggacggt
    28081 tcagctccgc attttatttt tactgtgatg tggcacttaa ccgatgatgt ttatcgtgaa
    28141 atttaccgaa caacggtata aggataggca atgacagaag cgattaaaat cattgatgac
    28201 gatgtaaaaa ccgtacttgc cgaagcgatt gccgattatg aaaaacgcac cggtaaaatc
    28261 ttacaacctg cacatattga gcgttccatt attcaaacct acgcttaccg tgagcagtta
    28321 ttacgcaaag gcattaatca cgccttttta caaacctttc cgcagtttgc gacggggatt
    28381 gcgttggatt tgtgcgggga aacttttggt tgttatcggc ttagagataa acctgcccgt
    28441 actttactac gcttttcagt aagtggtgaa catacagcta tagttatccc taaaggaacg
    28501 caggtggcaa ttaatgacga gctatacttt tcaacgctca atgacgatgt tattactcca
    28561 ttaattacct atgtggaaat tgatgcagag tgtaatcagg ttggtgttat cggtaatggt
    28621 tgggaatcag gaagagtcag taaactaaaa acagcactgg caactaatta taaagtaaca
    28681 gttgaaaaca ttgatattac gagcggtggg ttgatgcagg aagaagatga accttaccgt
    28741 aagcgaattt tagccgcacc ggaagccttt agtaactgtg gctctatcgc tgcatatgat
    28801 taccacgtcc gctctgtatc ccaagatatt gcagatgtga atatctctac gcctaggggt
    28861 ggcttggtaa gaattgcggt attgacccaa aaagggttac cggatacccg attacttgat
    28921 gatattaaaa aacacgttag tgccgaacgg ctacgcccac tttgcgatat ggtcgaggtt
    28981 attaagccca cagaacgccg ttatcaaatt acggcacgtt taatattgtt agatggctac
    29041 cgtgaggatt tggtaaaagc aaaagcccga gaggcattac aactctattt gtcagacaag
    29101 actaaaaaac tcggtttaga cattgtgccg tcggccatca tttcagcttt aagagttgag
    29161 ggtgtttacg atgtgaattt aattcagcca gtcaaaacta ttatcaacga aacagaatgg
    29221 gcgaactgca cagcaatcag cgtagaagtc gaagaggagc gtagagatgg ctagcttgca
    29281 ctatgcggac attattgtgc gagaccctaa atataaagca ttagcggatt taagcaagcg
    29341 gttaaatttg ctcgatactt cgcaaattat gactacgctg gtggatttat tgggcgacga
    29401 atgtatccca ttgctggcag aaaaatggtc ggtaaccggc tatgacggct tattggttgc
    29461 agatagcgaa aactcaaagc gagccttaat taaaagagca atcgaactac atcaactaaa
    29521 aggcacgcct tggtcaattc gtgaagtatt acgcagacta ggtttcggag aggttgagat
    29581 tgacgaggga ctgaaaaatc ggctgtatga aagcacttat gtgagcggaa tccccgaaaa
    29641 cgaacgctgg gcgcactatg cgattaggtt gagtaacccg attaccaatg agcaagctcg
    29701 caatatccgt aaggtcttac gcaattttgc tccggctcgt tgctctcttg cagttttgga
    29761 ttataaagca gatccaattc gatataacaa taaagcaacc tacaacggca catataacca
    29821 cggttcaagt taaggataaa ttatggcagg tgtacaagaa accgcacagt gggaaaacca
    29881 cgtttacaga attgaagaaa atgacccagt ccacggagga gaaaacggtg taaccaataa
    29941 gccaattaag cacctagcaa accgcacgct ctatctgcgt agattgctca ccgaggcagg
    30001 acaacgcatt aacccgaaaa aaatcacagc taccagcaaa aatagtaatg atttaactgg
    30061 gcatactcac gagattgacc acgcaagcct aacgcaaaaa ggcattgtgc agttaaatgc
    30121 gagtatccaa tcaactagca caactgagtc tgcaacccct tcagcagtta aagcagccta
    30181 tgataaagca gcaacagcag aacaaaaagc gacattggca aatgagaaag tcgaggcgat
    30241 taaagtaggc ggacgaaacc tcctcattca atccaacact ccacacaacg ggaatgcgta
    30301 ctcagtcaga tacgcattgg ctgaggctcc gaaagtaggc gaagagattg tagtcactct
    30361 atggggtgaa ctcggctctc aacgtactgg aattggcgtt tacaactctc aaggtgctac
    30421 ggagttggca aaactggtca aaattcgtga tggagtttat caaggtaaag gcatttggcg
    30481 taagccgatg agtgagggac gagagcgaac gcctaacgac acgcacctga atgtgtattt
    30541 ttacccgaaa accgcaacag ataataaccg tattgagcga atccagcttg agcgaggctc
    30601 aatcggtaca gattggacgc caaacgaggc agacttaaag gcagagatta gtgcaatccg
    30661 cactaaacta atccctgtac ggggtggcaa tgttgctaca accttaaatg cggctaagcg
    30721 gtcggattgg tttagagaaa tgcaaatccc ttatcaaagt ggttgggggt attacaccca
    30781 agcatttcat aactcaggga cgcaacacaa ctacagcaat ttaccgctga caggtcgtta
    30841 ttattttatc gccgaactct atcataactc tggttattct cacttgcgta tcacctatcc
    30901 aagtttaaaa cgcacctttg agagtgctat caaccttaac aatgaggatt tgattctaga
    30961 ttggcgtgag gtggtgtttt taaaagatgg attgtatcaa ggcactttta aaacaacagg
    31021 cacactagag tctgcttatc gtctaagagc ggctcgtgat gatgaacgtt atcagccata
    31081 cctgcaaatg gtcgatatgg gctatgacct tgccaatccc ccggtaggaa aaaacaaaat
    31141 tattggcagt gttgattatt acgttaaaaa cggcacaagc gagtcttcca aagcgacgat
    31201 gatggcagcg gcaatgcctg acaagaacgt attttgggaa gtagcattgt ggaatgcagc
    31261 acagcaacgg aatgtattgt ttaaggggta tagcaagact aacaatttga gtattggtaa
    31321 aaccaccgac aatgagcgag accgagtaca agtcaatggc acaatccaag ccaccgcacc
    31381 ggctgataac gccaataacg accaagtgcc gactacggct tgggtgcgta agatggcaaa
    31441 gattttagct gatggcaagg tgagtaaagc cggtgacaca atgactgggc atttattcat
    31501 caagaatggg gaatactctg cggtacatac ctataacaca agtggttggt tcgcaaaatg
    31561 ggaggcggcc ccattatctg attcgcactt tgctgccatt gtatatgcca acgacagaga
    31621 gacagttatc aatcgggtgt taattcccaa gaagaatggc acagtcgctt taattaatga
    31681 tattgccgat accgttagag ccgctgtgag tcgtagtgat aaatcccgta gtagaacttt
    31741 tcctctgcaa acggggaaaa aatatacaac cacagggagc gttacgattt atccagatgg
    31801 ccgaattgtg cagattttcc acttaaaaaa tattaaagcg gcgtggtttg attatgaggc
    31861 aagtgcggta ggagataggc atagagttgt caatatccct ctttggactg cgatgccaaa
    31921 taaaattttt gatgtcgatg ttaaaactgt tcgcccctca aataatgcct caacttacta
    31981 catagaagcg gctgaatggc tgagtgcgtg gcagatttac ggtaatgaca cgaacaaatc
    32041 aagtgtcaat attaatctat ctcgattcag aggtggaaag gatgaagata tggacttgta
    32101 tgtaacagtt gagggatatt aaatggcata ttttgtgaat gtgattgatg agcaaggcaa
    32161 ttatgagcta attgatgatg agtttattgg gctgtatccg gatttggatt ttaacacatt
    32221 acccaaactc acggataagc aatatcagac ctaccttgcc aaagcaaacg gcaaagagcg
    32281 atttgtaaat ggcgaatttg tgtatgagca aattaaggtg gatatgcaag cggtcatttc
    32341 cgctgaaaaa tctgcaaagt tagcagagat taaccaaaaa gcacaagcct ttatcaatga
    32401 tttagccaaa tacaacgaaa cgcctaagtt tgagcgtgat acttggcttg agcaagcgaa
    32461 agaggcaaaa gcgtgggtgg ctgacccaac cgtacaaacg ccaacccttg agttaattgc
    32521 gcaaatgcga ggcataccgc tcgacacgct acgccaaaaa gcctacgaaa aagcgatggc
    32581 gtatcaaacg gtggctgcta ttgtagcagg gcaacggcaa ggatacgaag accgcctaga
    32641 acaagcggaa accttagagc aaatacaggc gattgagccg atgtatcaat taccgcaagg
    32701 agcaaacaat gagcaaactg actaaattaa aatcgtggag ctaccacgtc ttaattgcaa
    32761 tagatcaact ctttaacgct ctcaccggtg gagcagcgga cgaaacattt tctagccgtt
    32821 gctaccgtgg tgcagtgctt gcggaaaatc cgaaaaaacg ttggcgtttt tggcactctt
    32881 ttttgaattg cttattttta gacccaaagc actgctacgc cgcttataaa gcggaggtac
    32941 accgcaagca gtatccgaag gcatttagac ttggggggat ttaatgaaaa agcaaaactt
    33001 aaaattagtg cggggcgatg atgtgagttt tagattcagc attaaagaca gcaccggaca
    33061 acctcttgcg ttaaaggatt tgtggtttga tttgcactta gtcagctatc aaggtgaggt
    33121 gctgattgct ctctctactg atgatggcag tattgagaca gcagaggctg gtcagatggt
    33181 gttacatttt agtcaccagc aaactgctcg agctgaatgg acaagtgcca attatgactt
    33241 gcaactcacg cacgactata caagagtcta ggaggtggag atgacctcta tcattgaact
    33301 agacctgact gatgacctca tcattgaggt gcagttagat agcacaatca ttaccggcga
    33361 tagcttttta gccaacctgc cggatttact ccaaatttac aaccaagcaa agtcagatag
    33421 cagtaaggag cttaacaatg actaaacaca aaaaccacga aaaccacccg attgctataa
    33481 cattctacca acttggcaaa gatgtcggcg acattaaccg ccggctagcg gttattgagc
    33541 aacgtgagca atcagcacag ccaagccaac cacaagctga ggcggttaca atgccacagc
    33601 aagatgctgt tgccattaat aacatcaatg ccgttttgga ggcggtcgaa aaatacaaaa
    33661 cttttgaaaa atacaacact cagtggcaag agcgttttga aaaattcctg tctcgtaacc
    33721 cgaatgatta cgagttaagt gaagagcaac gccaaaaact ttaccacacg atgtgccagc
    33781 atttgtggca ggtgaacttt actgaaatca atagtaaaca gtatgaatta ccgatcccgc
    33841 aacaattcca gggtaagttt ggctatattg tcaaaacctc gggcggtagc acagaaatta
    33901 gttttgagtt gctatctgaa actcacagca cttatcttta tccggatagc tatattcccg
    33961 agggcggtgg cgatgtaatg ctcaagccgg cttatattta tttagtgatt ccggacttag
    34021 tggcaatgcg tgagccggag gtggtggggg tttcaccgct gaaactgaac attctgcaga
    34081 aacacctgct gacacctcag aaactacagg agcagaagcc cttgaacacg aaggcaaact
    34141 gattgatggc gtatggcatt ttgagcgaga gccggtaaat ccaccgagag atcagaatta
    34201 ttatgtggca ggtaacctgt tctacaacgg cataccggat tgataaattg atgtttcagt
    34261 aaacctaatt aggggggaat cccccttttt tattattata aggaaagaaa atgaataaat
    34321 ctttagtagc gttagctgtt gcagcgatgg catcgaaagc acaaactaaa cagcaagcaa
    34381 gcaagcaagc aagcaagcaa gcaagcaagc attgtgagat agagaaagta tttaaacaag
    34441 ctcctttacc cttttcaggg caaaaacgga tgtttttatc ccatttcaaa caggtgttaa
    34501 atgcaaatat tgaagcagac gggaaagatt ggactattat agatgttttt ggtgggagtg
    34561 ggttgcttgc acataccgca aagcgtgaga aaccgttagc aagagtgatt tataatgatt
    34621 ttgataatta cgccgaacgg ctaaaccata tcaaagagac aaatcaactt cgccaagaaa
    34681 tctaccaaat tgttgatgaa attataccaa aaaataagag aattagcaat gaaattaaag
    34741 ctaaaatcat caataaaatc aatgattttg aggggtttaa agacctcaaa tgcttaagtt
    34801 cttggttatt gtttagcggt gagcaagttg caactttaga tgagttattt aagcacgatt
    34861 tttggcactg tgtgcggcaa agtgactatc ctgaagcaac gggttatctt gatgatattg
    34921 aggtggttag tgagtccttt catcaattat tgccgagatt tcacgacaaa gagaaagtat
    34981 tattgattct tgacccacct tatctttgca caagacagga aagctataag caggaaaatt
    35041 actttgattt aattgatttc ttacggttga tagaccttac taaaccacct tatatcttct
    35101 ttagctcaac caaaagcgag tttattcgct ttattcacta tatggttcaa aacagaaaag
    35161 aaaactggca agcgtttgag ggagcggaaa gaatagtggt taatgcctcg gcaagttata
    35221 acggcaaata tgaggataat atggtgtata agttctaaaa atttaaacgc cctttgatag
    35281 tgatttaaag ggcgttaaaa aaccattaaa attaagaaag taaagctcct gttttctttc
    35341 gtagttttcg tggttgcgtt tcgcagtttt gttggctcgc tacaattact gttcattgta
    35401 atgtttaatc gaccattggt tttgctagga tcagtttcac caaaataacc gttaaaacct
    35461 tggacggtgc cttctgctgc tttgattttt tcagcaagta tttgttgctt tgcagcactt
    35521 tcatctgtta ccttgagtac ttcaaagtat tcgttttcac gaatgagacc agtagcaaag
    35581 tctaaatcga tgaaaacttt acgcgcatta aaaatagctg tgatctctgc aacgcttaaa
    35641 ggttttttca aacggataaa attagttggc aagtgtggaa aacgttgata tgtgaaaata
    35701 tctttgtcca aatgacgaga aacctgatct ggactagtaa ttgcttgaac tttcacttgg
    35761 tcaattgttg gactaactat gccggttagt gtaatgtttg ctgtttgggc tgtattatga
    35821 ttgacaacca tcgctccttc atcgctattc tgaatacggc ggaacgtgag atcattgccg
    35881 ttgacatcta agcgcccacc acgataacca aaatagatat tgttaggatc catttgatct
    35941 gatgaattga ggattacggt aggtctgcca ctcacaatac ctagctctga aaatgcagat
    36001 tttttgttat tttcatccgc ttgttgattt aatataacag tgccgtcacc aacgctaacg
    36061 gagcctttgt tttctccttt gccgttgata gttagtgtcc cttgtccgat ttttgataat
    36121 ctgtcaccag cagggttact gattttccag atcacatttt tatctttatc aatatcaaca
    36181 ccggctccta accaagtaat gcctgctttc ataccttcca cagtggtatt accatgaaaa
    36241 tggattgctc ctgcaccttg gttgatattc tctgtgagac ttagcgtatt gttttcaccc
    36301 aaaatatgga atgttttacc gtgttggagt tgaggattcc aagggttatc gcctgtatta
    36361 ccattatgac cttgaagtgt tggtaatgaa gtatctgcta aattaactgt aagaggagca
    36421 ttccctccta cgattgagct ggtattgcca gaaggtgtcc aagtgagtct agcaccattt
    36481 gcattaatag cgcctgcatt attttctttt tctaaagcac gtacataatg tgggtggtga
    36541 tagttccagt aagatttata aacatctccc ccaagcgtat tattctctga gaaatagtca
    36601 ctatatacac ctaacacaac ccattttttg gtacgaacat cataaccaaa aagagcggag
    36661 ccactatcgc caggtaaacc gagagttgtt aagggaccgt agccgtggtc tttaaataca
    36721 tcgtttatgg tattattttc agtttttgct actaaaatac ggctgttaaa atcgctgcct
    36781 ggaacgcttg gatcgccatt agtaacaggc agaacgctac ctcctgtcaa aaaaggaccg
    36841 ttaccgactt caatacgccc gttgtttaag cgatctcttt cgttgttaac cactgcttgt
    36901 ctaccagaac cggcacgaat aaacatgggg aaaataaaag ggtcgctaaa tacactataa
    36961 aaatcttgta cattttcggt agtgcgttca atctcattag ctggagcgac ttcagttact
    37021 aatttcgata acctaggtgc gtggtagtcc cagcggggcg ttgggttacc tgaaccatct
    37081 aaaatcagtt tttctccttc gtcattacgt tcacgttttt ctatgccttt cccgagatct
    37141 gttctttctt tatttggatc aggcatatag ttattacggc gcaccacact ataattgtaa
    37201 tgatggtcgt cggctttttc gctagatgaa tcaccaaatt gaatgtcccg atagccttgg
    37261 ttgtggttta cactaataac gtattgtgga ttaactaatg ttgcaatccc tgtttgacga
    37321 gtaatggaag agaagtcaat cattggaata gacatagtct cacctgttac tgtttcaaaa
    37381 acaggtagat cattagagtc ttcatcacct ccaccataga gaaattcata acaaccgggt
    37441 aaactttcat tatcaaagca ttcagatagg cttacattcg gcttaggtga aatatttgat
    37501 tccacttcaa cctgcttagt tggtgtaacc tgtaaaaaag taccgatgtt tttgcccgtt
    37561 ttatcaataa ctggaatatt ggttgcccca acaaaaaatt tgcctttatt ttctgctaaa
    37621 tcacgaaaat attgataatc gacatcacca cgtacaatag atgccagtaa tgttggtgaa
    37681 agagaaatag caattgatgt tgctagaaga gagagcttga aagtatgctt cattattatt
    37741 tgaaacctgt ataaatatgt aagtagatca gatttgagcg ctattaaaaa gattattta
//
LOCUS       DANMCL010000011        37788 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.011, whole genome shotgun sequence.
ACCESSION   DANMCL010000011 DANMCL010000000
VERSION     DANMCL010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 37788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37788
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.011"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            373..1731
                     /locus_tag="PXF40_000532"
     CDS             373..1731
                     /locus_tag="PXF40_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HDL5801907.1"
                     /translation="MITIKKGLDLPIAGKPEQVIHNGNTVTEVAMLGEEYVGMRPSMK
                     VREGDVVKKGQVLFEDKKNPGVVFTAPASGTVTAINRGEKRVLQSVVIKVEGDEQITF
                     ARYEASQLASLTSEQVKQNLVESGLWTAFRTRPFSKVPALDAEPSSIFVNAMDTNPLA
                     ANPEVIIAEHQQAFFDGLTVLSRLFESKKVIHLCGSADSNILNAAQSRQINNVETNRF
                     KGPHPAGLSGTHIHFIDPVGATKQVWYLNYQDVIAIGKLFTTGELFTDRVVALAGPQV
                     KNPRLVRTRLGANLSQLTANELNAGENRVISGSVLSGAIATGVHDYLGRYALQVSALL
                     EGREKAFFGMIAPYSDKYSITRTTLGHFAKKLFNFTTAVHGSERAMVPTGAYERVMPL
                     DIIPTLLLRDLAAGDTDSAQALGCLELDEEDLALCTFVCSGKNNWGPLLRQALDKIEK
                     DG"
     gene            1734..2969
                     /locus_tag="PXF40_000533"
     CDS             1734..2969
                     /locus_tag="PXF40_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HDL5801908.1"
                     /translation="MGLKNLFEKMEPAFHKGGKYEKWYTLFEAAYTIFYTPGTVTRKD
                     AHVRDAIDSKRMMLIVWLALFPAMFYGMYNVGAQGILAALKMGTLTDLVANNWHYSLA
                     DSLGSVADAGWGTKMLLGATYFLPIYLTVFAVGGFWEVVFAMVRKHEINEGFFVTSIL
                     LALIVPPTLPLWQAALATTFGVVVAKEVFGGVGKNFMNPALAGRAFLFFAYPGQISGD
                     AVWVAADGFSGATALSQWAVGGQGALQHVATGETITWMDAFLGNIPGSIGETSTLMLI
                     IGAAIIVFARIASWRIIAGVMIGMAATATLFNVIGSDTNPLFSMPWHWHLVLGGFAIG
                     MFFMATDPVSAAFTNKGKWAYGILIGFMCVLIRVVNPAYPEGMMLAILFANLFAPIFD
                     YLVVQGNIKRRLARVANNG"
     gene            2962..3735
                     /locus_tag="PXF40_000534"
     CDS             2962..3735
                     /locus_tag="PXF40_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HDL5801909.1"
                     /translation="MAKFNKDSVGGTLTVVVLLSLICSLIVAGAAVMLKPTQDIQKQL
                     DKQKNILQAAGLLQKDTNVQETYTKFIEPKIVDLATGDYVEGVTGFDARAAAKDPAQN
                     VVIAPEDDKANIKTRAKYAEVYLVKDESGKTTQVVLPMHGNGLWSIMYGFVAVQPDAN
                     TVNGITYYEQGETAGLGGEIANPNWQKNFVGKKLYNEQNQVALRVGKGASADKDHGVD
                     GLSGATLTSNGVDGSFKYWFGQNGFGPYLAKFKAAAGAN"
     gene            3735..4361
                     /locus_tag="PXF40_000535"
     CDS             3735..4361
                     /locus_tag="PXF40_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005717817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HDL5801910.1"
                     /translation="MADNNNLKKLLLSPIVDNNPIALQILGICSALAVTTQLQTAVVM
                     AIAVSLVTAFSSMFISMIRNYIPNSIRIIVQMAIIASLVILVDQILRAYAYDLSKQLS
                     VFVGLIITNCIVMGRAEAFAMKSGPVESFVDGIGNGLGYGAMLIIVAFLRELIGSGKI
                     FGITILETVQNGGWYQANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK"
     gene            4363..4959
                     /gene="nqrE"
                     /locus_tag="PXF40_000536"
     CDS             4363..4959
                     /gene="nqrE"
                     /locus_tag="PXF40_000536"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005529392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HDL5801911.1"
                     /translation="MEHLLSIFVKSIFIENMALSFFLGMCTFLAVSKKVSTAFGLGIA
                     VIVVLGIAVPANQLVYTHVLKEGALVEGVDLSFLNFITFIGVIAALVQILEMILDKFF
                     PALYSALGIFLPLITVNCAIFGGVSFMVQREYNFVESVVYGVGAGTGWMLAIVALAGL
                     TEKMKYSDVPAGLRGLGITFITVGLMALGFMSFSGIQL"
     gene            4970..6199
                     /gene="nqrF"
                     /locus_tag="PXF40_000537"
     CDS             4970..6199
                     /gene="nqrF"
                     /locus_tag="PXF40_000537"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HDL5801912.1"
                     /translation="MDSNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINNDP
                     EKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVKSGGGEILPTELSHISKK
                     EAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEE
                     VPFRAGGYIQIEAEPHTVHYKDFDIPKEYHEDWDKFDLWRYTSKVDEHIIRAYSMASY
                     PEEKGIIMLNVRIATPPPRNPDVPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAE
                     MVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSEREMFYVEDFDGLQAENDNF
                     KWYVALSDPLPGDREDYFRGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGML
                     KSLGVEDENILLDDFGG"
     gene            6311..6745
                     /locus_tag="PXF40_000538"
     CDS             6311..6745
                     /locus_tag="PXF40_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5801913.1"
                     /translation="MEQLDITVLENAFNSLEKTIVSLENQAWFNRQEAIIQDTLIAGA
                     IQKFEFVYELSIKMLKRQLKNIESNDTDIDSTEFRDILRMAAQYGLIESPEVWLDYRK
                     MRNITSHTYDQNKAQQVYNGISNFLESTYFLVKQLQKRNSYD"
     gene            6738..7031
                     /locus_tag="PXF40_000539"
     CDS             6738..7031
                     /locus_tag="PXF40_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5801914.1"
                     /translation="MIDLTESQRQQVLDIFKKYLPDTPVWVFGSRIKGTAKAYSDLDL
                     ALITKQPLTIRQQTELELAFTDSDLPFTVDLIDWASCNESFKQIILQRYEVLI"
     gene            7080..8114
                     /locus_tag="PXF40_000540"
     CDS             7080..8114
                     /locus_tag="PXF40_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HDL5801915.1"
                     /translation="MKKFFLLLIAFFTLSACEKAPEQITLSGKTMGTTYTVKYIDNGE
                     VENLISPEKMKNELDGLLIEVNNQMSTYQQDSEISRFNQAKQANQAVEISQDFAKVVQ
                     EAIRLNKVTEGALDVTVGPLVNLWGFGPDKRLNKVPSDEQIAERSAYVGIDKILLEMS
                     SKPKLTKSAANLYLDLSSIAKGFGVDKLAEHLETIGVSNYLVEIGGELRGKGKNLQGL
                     DWRIAIEKPVMTQGQAAQITVPLHNLAMATSGNYRNYFEDEKGNRLSHIIDPKQLRPV
                     NHNLASITVFAPTTMTADGLSTGLFVLGAEKALAVAEREKLAIFLIVKNGDKFETQMS
                     SEFSKLIQSQ"
     gene            8127..8372
                     /gene="nqrM"
                     /locus_tag="PXF40_000541"
     CDS             8127..8372
                     /gene="nqrM"
                     /locus_tag="PXF40_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HDL5801916.1"
                     /translation="METVLLTFGFFVAVIFAMSIGFIVKGKTIKGSCGGITALGMKKM
                     CDCEEPCDNLKSKIADGTADPEEVARFNKEPQFYEVK"
     gene            8374..8790
                     /locus_tag="PXF40_000542"
     CDS             8374..8790
                     /locus_tag="PXF40_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase substrate binding
                     protein"
                     /protein_id="HDL5801917.1"
                     /translation="MNRDIRWKQRFDNYKKSVSYLQAEAEKYADTDIDVIKKGIIQSF
                     EITHELAWKLMQDILKWEGEVDIYGSKTASRLAFNRGLITQGEVWLEMIKSRNITVHT
                     DDETILTEEFNKIIKAYLPLFIEFEQRVETLCQTLD"
     gene            8772..9083
                     /locus_tag="PXF40_000543"
     CDS             8772..9083
                     /locus_tag="PXF40_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HDL5801918.1"
                     /translation="MPNFGLSERATKTITDILAKYPEVEQAIIYGSRAKGNYREGSDV
                     DLTFKGKDLTYDIVKRIWGDLDDSDSPYLFDLSIYHQLTNANFIEHIDRVGKVFYQRE
                     L"
     gene            9194..10357
                     /gene="mnmA"
                     /locus_tag="PXF40_000544"
     CDS             9194..10357
                     /gene="mnmA"
                     /locus_tag="PXF40_000544"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HDL5801919.1"
                     /translation="MTTQLTSKTYDTHFPKLTPEQLAENSKKKVIIGMSGGVDSSVSA
                     FILQQQGYQVEGLFMKNWEEDDDTDYCTAAAELADAQAVADKLGMKLHKINFAAEYWD
                     NVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRTSDDQD
                     AKLLRGLDENKDQSYFLYALNKKQIGQSLFPVGEIEKPIVRAIAEDLGLATAKKKDST
                     GICFIGERKFKDFLARFLPAQPGEIRTVEGKLVGRHDGLMYHTLGQRKGLGIGGVKGL
                     SEDPFYVVEKDLINNVLIVAQGHDNSALLSSGLIAKQLTWVDMQPLRENLRCTVKTRY
                     RQADIACEIQVIDDETIRVMFDEPQIAVTPGQSAVFYLGEVCLGGGIIESQLK"
     gene            10474..11853
                     /gene="argH"
                     /locus_tag="PXF40_000545"
     CDS             10474..11853
                     /gene="argH"
                     /locus_tag="PXF40_000545"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HDL5801920.1"
                     /translation="MALWGGRFTQQADAKFKYFNDSLRFDYRLAIQDIEGSIGWAKAI
                     TSVGILTVAELEQLIAALKEVRAEVESNLTIILKDDAEDIHSWVESKLIEKVGDLGKK
                     LHTGRSRNDQVAVDIKMWCKVQAVALQERIRALQERLVSVAEENQESVMPGYTHLQRA
                     QPVTFAHWCMAYYEMLERDFSRLSDANKRMSTCPLGSGALAGTAYGIDRDLLARDLGF
                     EEATRNSLDSVSDRDHILELLSTASISMMHLSRFAEDLIIFNSGESGFLEMSDRVTSG
                     SSLMPQKKNPDACELIRGKSGRVFGALNGLLTTLKGLPLAYNKDMQEDKEGIFDALET
                     WQACLEIAELVLVDIQVNTERTREAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VYAISKKEPLEALSINEFQQFHHSIGDDVYPILSLESCLEKRCAKGGVNPQRVAEAIA
                     VAKANLASK"
     gene            12021..13019
                     /locus_tag="PXF40_000546"
     CDS             12021..13019
                     /locus_tag="PXF40_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4115 domain-containing protein"
                     /protein_id="HDL5801921.1"
                     /translation="MTESVNSTQAGTALSLGQQLKAAREALNLSITDVAQKTNLKKSH
                     IESLENDIFILQNVAPTFVRGYVRNYVKFLRLPESLISSVNYGEVTIPKEVTKVSSVK
                     PSSNSQGKTLKYLTVLVLLAALGMTLLWWWQGYQKEQENREQFVSSAPVAEVANTATN
                     NDASAQTSVPVQQPIQVSEQPAQVAETVVAAEPALTEKVEPTQAASSPVTQEDVKVVE
                     EVKQADATTAQVEAVNVLQQSQSEQAPTEQPVAVTNDELRIEITGSQSWITVRGAKNK
                     RLAEKLYNNGETLSFNENEQYRLTIGAPANVKVYYKGQEVPLKIDGRVARIHLPLQ"
     gene            13120..14232
                     /gene="ispG"
                     /locus_tag="PXF40_000547"
                     /gene_synonym="gcpE"
     CDS             13120..14232
                     /gene="ispG"
                     /locus_tag="PXF40_000547"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HDL5801922.1"
                     /translation="MIHQSPIKRRVSKKIYVGNVPVGGDAPITVQSMTNTRTTDVEAT
                     VAQIKSLERVGADIVRVSVPTMDAAEAFKAIKQQVSVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRTVVDCARDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLES
                     ALRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARAGSV
                     KSAVGLGLLLAEGIGDTLRVSLAADPVEEVKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EIDVIATVNELEQRLEDIITPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGV
                     RQKERFDNAKLIDQLEAKIRARVAQQHNRIDIEQIG"
     gene            14238..15509
                     /gene="hisS"
                     /locus_tag="PXF40_000548"
     CDS             14238..15509
                     /gene="hisS"
                     /locus_tag="PXF40_000548"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HDL5801923.1"
                     /translation="MAKTIQAIRGMNDCSPSESPLWQWVEQKVRNVLASYGYSEVRMP
                     IVESTPLFARAIGEVTDVVSKEMYTFWDNDEQLTLRPEGTAGCVRAAIERGWIYNNEQ
                     RLWYMGPMFRHERPQKGRYRQFHQAGVEVFGIANPEIDAELIILTARLWKELGIDQHV
                     SLQLNSIGSLEARANYRSALVKFLENHTALMNEEEKERLVKNPLRILDTKNEALQNVL
                     NDAPKLLDYLDDDSREHFTQLCALLDAMGIRYEVNPKLVRGLDYYNKTVFEWVTSALG
                     SQGTVCGGGRYDGLVEQLGGHATQGVGFAMGLERLVLLVQEVNKEIDLPKTVDVYIVF
                     SGEGATLNAFQLAEQIRSELPHVGVMTHCSGGKFQKQFKRADKVEAQIALVIGESEVA
                     EKQVVIKDLRSGAEQITIAQSELIAELSKRF"
     gene            15519..16139
                     /locus_tag="PXF40_000549"
     CDS             15519..16139
                     /locus_tag="PXF40_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HDL5801924.1"
                     /translation="MSNEYLNKTEEQQFEDAKNWFKENGTPILVAIILACAATAGWNF
                     WKNHQLETAQKTSASYQSVMESYLQNPSKNQPLVEKFIADNKDSSYAAFAQFEVAKQA
                     VEKGNFSAAKTALQSVLTYSDSTLQSIARFRLAQIDFQLKSYDEALASLAQIQDKAWE
                     LRKQILTGDILAAKGDIPAAKSAYEQAKTTANPQEQTLIDVRLNNL"
     gene            complement(16202..17305)
                     /gene="dnaN"
                     /locus_tag="PXF40_000550"
     CDS             complement(16202..17305)
                     /gene="dnaN"
                     /locus_tag="PXF40_000550"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HDL5801925.1"
                     /translation="MQITITREQLLKPLQQVCGVLSSRPTLPVINNLLLEIEGNRLSL
                     TGTDLEVELTTQAQLLQAVDFAGKFTIPAKKFLDISKSLPDDSVISVQFEEDKAIIKA
                     GRSKFSLATLPASDYPNLMDWKPEVDFSIDQSTLARLIDATQFSMANQDARYFLNGMK
                     FETEGNLLRTVATDGHRLAVCTMVLNQELLTHSVIVPRKAVLELSRLVASNDETVRLE
                     IGSSNIRITMNGIVFTSKLIDGRFPDYRRVLPRNADRILEAETETLKRALMRAAILSN
                     EKFRGVRLTLSNNLLKITANNPEQEEAEEIIDVAYDSPEMEVGFNVSYVLDVLNTLKC
                     QRVRFSLVDSSSSCLIEDCDNSSAEYVIMPMRL"
     gene            complement(17324..18673)
                     /gene="dnaA"
                     /locus_tag="PXF40_000551"
     CDS             complement(17324..18673)
                     /gene="dnaA"
                     /locus_tag="PXF40_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HDL5801926.1"
                     /translation="MEQIVSSLWSDCLNHLQTKVSPTDYSTWLRPLQASSENGELTLY
                     AQNQFVENWVKDKFLSEITELARFLAKNDNLVVTLKVGIKPTEQPKVSPNLKNESSEF
                     SNTGFKTGLNPNQTFDNFVQGRSNQLAKLVAQQVVDNLGESHCNPLSFYAGTGLGKTH
                     LLHAIGNELVKRTPGTRVLYIHLERFYRDIIKAINSSNNDAEKIKKFYRSLDVLMIDD
                     IQFLANKPKVQEEFLHLLNALFEQRKQIILTSDVLPKNIDKIDTAIKSRLSGGISATI
                     EPPELETRVAILRQKALERGADLQEDAAYLMGQKLRTNVRELEGALNRVIAWQKLTLR
                     PITVDAVRETLQDLFASFDYLITIENIQRIVAEYYGIKVADIKSKSRARSIARPRQMA
                     MALAKELTNHSLPEIGREFGGRDHTTVMHACKTINELRDTESGIQEDYIHLTRKLSS"
     gene            complement(18860..20707)
                     /locus_tag="PXF40_000552"
     CDS             complement(18860..20707)
                     /locus_tag="PXF40_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5801927.1"
                     /translation="MFEKLFKWFEARVETYPNEMPKTPKSGLIPFIYDATKGMRFYIL
                     LLTVLVAAVGIIEAVLFRFMGDLVDWVNKYSPTELWAEKGWTIIGMFFIALLAVVFVY
                     LASSIRFQSLQGVFPMRLRWNFHRLMLGQSLGFYQDEFAGRVSAKVMQTALSVRDVIM
                     TCADMLVYVLVYFTTSSVILLQLDGWLFVPFILWVISLAATIIYFVPKLAQAAQEQSD
                     ARSLMTGRITDAYANIATVKLFSHGNRESAYAKESMEGFMVTVHKQMRLVTVIETVTN
                     LTSMALIISTAGIGLWLWGSSVVTAGAIATSTALALRIKGLSQWIMWEFARLFENLGT
                     VQDGMITLSKPHNVVDKIDAKPLNVTKGEIKFENVDFAYDPKKPLLKDFDLTIKPGEK
                     VGLVGRSGAGKSTLTNLLLRFYDIQDGSITIDGQNIRDITQESLRSQIGLVTQDTSLL
                     HRSVRENLMYGRPNATEEEMIKAVEQAAASEFIPNLQDAKGRTGFDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEVAIQENLTQLMEGKTVVAIAHRLST
                     IMAMDRLIVLDKGEIVEQGTHEELLAQNGVYARLWAHQSGGFLPENTDI"
     gene            complement(20776..21285)
                     /gene="luxS"
                     /locus_tag="PXF40_000553"
     CDS             complement(20776..21285)
                     /gene="luxS"
                     /locus_tag="PXF40_000553"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HDL5801928.1"
                     /translation="MPLLDSFKVDHTKMNAPAVRVAKTMTTPKGDTITVFDLRFCRPN
                     IDILPVRGIHTMEHLFAGFMRDHLNSEQVEIIDISPMGCRTGFYMSLIGSPSAEEVVK
                     AWTASMEDALHKIPDVSAIPELNEYQCGSYKEHSLKEAHQIARNVLAAGIGINRNEDL
                     ALDEKLLNP"
     gene            complement(21303..23969)
                     /locus_tag="PXF40_000554"
     CDS             complement(21303..23969)
                     /locus_tag="PXF40_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MCE family protein"
                     /protein_id="HDL5801929.1"
                     /translation="MTMEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLFFQILK
                     EQGETITIRFSKGDGITAGKTAIRYQGLQIGQVKRVYFVDNLKEVEVQAEINPEAKSI
                     LRKQTKFWLVQPSASLAGVSGLDAIVSGNYITLLPGEGDFVDEFIAEEDPPAITVSDG
                     DLLIRLISDDIGSITVGASVYFRKVPVGNIADYRFTKDQKKIEIDVVINQKYAHLVKK
                     ESRFWNISGISADVNLQGIKINMDSLASVVQGAVAFDSPDNMEIAEQGQKFELYPDLK
                     SAKRGIEINVKLPLTHNLKINETGVFHQNVQIGMLSQLKLPQVKDNGVPQQESGQHKQ
                     IDGVLLIDPSYENLLRSQTKILLKEPKFSLNTEQLTKVGELLRGVYFEVHPGEGEPQS
                     EFVVQNEADYLLSLPNLLSFSLIAPQAYGVDTNQGIYYSDVQIGEIVKRSLELDKVRF
                     DVIIYPPYRNLIGSNSKFVAISNIDMSVGLDGLRVHAGSPSEWLKGGVRLINGKNDGS
                     PKKQYALYKDIESAESGMATLDKKATTTLSADSLSGISEGSLVLYRDFQVGEVLKITP
                     KQQKFEVELFIQPNYRHLLTEKSRFWIEPATSVDVSLKGVNITTAPLMRTLKGAISFD
                     DGGSKGNKTLYASKEKATSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQNA
                     KKQIKATAYIQRKYYPLIAKAGSKFNVISPEISTSGFKNLDAALQNYITVDVGSGQAQ
                     NQFVLADTDTVKTTYANGFPIIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDR
                     VLIYVNIQDKYKHLVRTNTQFWQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYT
                     KVVKPQAQPNRRFFLQRKLPDEAPAWDQGIAE"
     gene            complement(24052..24492)
                     /gene="fur"
                     /locus_tag="PXF40_000555"
     CDS             complement(24052..24492)
                     /gene="fur"
                     /locus_tag="PXF40_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HDL5801930.1"
                     /translation="MSEANIKRLKEVGLKVTEPRLTILALMQDIRDEMQHFAAEDIYK
                     ILLEKGSDIGLATVYRVLNQFEEAGILTRHNFDANKAVFELNMNHEHDHIICMDCGKV
                     FEFKDPDMERRQREISEKHGMELTNHSLYLYGKCSNLTNCDEKK"
     gene            complement(24528..25052)
                     /gene="fldA"
                     /locus_tag="PXF40_000556"
     CDS             complement(24528..25052)
                     /gene="fldA"
                     /locus_tag="PXF40_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HDL5801931.1"
                     /translation="MAVVGLFYGSDTGNTENISKMIQKKLGAELIDIRDIAKSTKEDI
                     EAYDFLMFGIPTWYYGESQADWDDFMPTLKEIDFNGKVVAIFGCGDQEDYAEYFCDAM
                     GTVRDVVEPNGGVIVGHWPTAGYTFEVSQALVDDDTFVGLCIDEDRQPELTTERVNKW
                     CEQLKEEMCLDQLA"
     gene            complement(25058..25333)
                     /gene="ybfE"
                     /locus_tag="PXF40_000557"
     CDS             complement(25058..25333)
                     /gene="ybfE"
                     /locus_tag="PXF40_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HDL5801932.1"
                     /translation="MAKQDSDCITLDLFATVPKVGRPRTNPLDREQQLRINKRNQLKR
                     DKSSGLKRVELKLHSNLVKLLEEQASEQGVSRGQLIETILNNYLTNR"
     gene            25574..26560
                     /locus_tag="PXF40_000558"
     CDS             25574..26560
                     /locus_tag="PXF40_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5801933.1"
                     /translation="MSNIHLAIAADFTLAEKLLEALANQDLGIENISAVELEPFGEEQ
                     NLRFGAKAVAQYALDEVNWAEFSHVLFAGKMAQAEVLAEAVKAGCVILDLYGITALIG
                     DVPVVVPSVNDENVANLRERNIVALANPQISQLALALKPLLNEPLKQVWVTSLLPSAY
                     FGDEKVKELAGQTARLLNGIPFDENAERIAFDVVPANVQGEEKSLPFSKAFELQIAKV
                     LPNLTACTTFHSVQVPVFYGVSQMVSVQSEYQLDANALSEAWKAENWLNFNENSVITA
                     VKNGENEEQNALEISQLLAKSEQEVQFWTVADEQRFSLAFLAVKLLKLVLAY"
     gene            26657..27952
                     /locus_tag="PXF40_000559"
     CDS             26657..27952
                     /locus_tag="PXF40_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5801934.1"
                     /translation="MLEKLFQLKAKGSNVKTEIIAGITTFFTMVYIVFVNPSILGVAG
                     MDTQVVFVTTCLIAAFGTIAMGLFSNLPIALAPAMGLNAFFAFVVVQKLGYSWQVGMG
                     AIFLGSVGLFLLTVLQVRYWFMSAIPLGLRVGIGAGIGLFIALIGFKNMGLVVPNPAT
                     LVALGDLHDPKVLMGILGFFIIVVLAAKGIHSGVLISIVIVTALALAFDPAVSFNGIM
                     SMPPSLGAVVGQVDIAGAFDVALLGMIFSFMLVNLFDSSGTLIAVTTKAGFADEQGRF
                     PKMKQALLVDSTAAMAGSYMGTSAISTYIESGSGVSVGGRTGLTAVVVGILFLLTIFF
                     SPLAGLVPAYATAGALVFVGILMASSLIEVKWDDLTEATPAFITTAMMPFTYSITEGI
                     AFGFISYCVMKAFTGRWKEINLSVLVVSLLFIAKFVWVG"
     gene            28072..28440
                     /locus_tag="PXF40_000560"
     CDS             28072..28440
                     /locus_tag="PXF40_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/DsrF/TusD sulfur relay family protein"
                     /protein_id="HDL5801935.1"
                     /translation="MSNSVQKLLFIINSAPYGNETFFSALRLALQIQEQHKANTEIKL
                     FLMSDAVTAGLAKQNPAEGYHIQQMLEILTAQGANVKLCKTCTNARGITDLPLADGVE
                     IGTLIELADWTIQADKVLNF"
     gene            28440..29633
                     /locus_tag="PXF40_000561"
     CDS             28440..29633
                     /locus_tag="PXF40_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5801936.1"
                     /translation="MQNIDVVVIGAGAAGLFCAAQLGQAGKKVVVLDSGKKVGRKILM
                     SGGGFCNFTNLDVSAGNYLSQNRHFVKSALSRYTQWDFISLVSHYGISYHEKELGQLF
                     CDESSQQIVDLLQAECNKGKVEILLRQAVISVEKVANFFEISTACGKFQSEHLVIATG
                     GLSMPALGASPFGYQLAEQFGIPVVPPRASLVPFTWKESDKYFAELSGIALPITVSAN
                     GKSFSNQMLFTHRGLSGPAILQISNYWELGETVEIDLLPSQSITDILSELRQSSPKLQ
                     LKTVLSRYLPKKLVEVWLEQKLLTDKVIADLSKKDLTLLEQFIHHWHFLPNGTEGYRT
                     AEVTKGGVDTDYISSKTMEAKNTAGLYFIGEVLDVTGWLGGYNFQWAWSSAFACAEGI
                     IEKSK"
     gene            complement(29704..29922)
                     /gene="infA"
                     /locus_tag="PXF40_000562"
     CDS             complement(29704..29922)
                     /gene="infA"
                     /locus_tag="PXF40_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HDL5801937.1"
                     /translation="MAKEDCIEMQGTILETLPNTMFRVELENGHIVTAHISGKMRKNY
                     IRILTGDKVTVEMTPYDLSKARIIFRAR"
     gene            complement(30032..30691)
                     /locus_tag="PXF40_000563"
     CDS             complement(30032..30691)
                     /locus_tag="PXF40_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HDL5801938.1"
                     /translation="MYISREKITKTLLLAGITLLCCGIVAVILMGVNQFKLGSQLASI
                     NQVSNLSHLLVRQQANIFSFLLVKNAKTDELVDALDSFAKEDFIIDANIYSPNGVLLA
                     QSQNAKDLKVLLDSEQSAKTQQIVEPIFSQQALVGFLRVTFDAEYGQTTKARVEQQFH
                     QLYGEIIILLLTGILLASSINYYFRRKIHHVQISPKPLMSQVKTQTQRFHSRRRWIKR
                     K"
     gene            30777..31640
                     /gene="serB"
                     /locus_tag="PXF40_000564"
     CDS             30777..31640
                     /gene="serB"
                     /locus_tag="PXF40_000564"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HDL5801939.1"
                     /translation="MTNTIFIYSKTLNEREIEQFSQQTAAILLKQAVYLDYKIAFFST
                     NLTACELRETAQKINADISDLTIIPTLNQGGLLLMDMDSTAIKIECIDDIAKLAGTGE
                     VVSAITASAMRGELDFEQSLRKRVGTLENASESILQKVRENLPLMDGFEQMVAILKEH
                     GWKLAIASGGFDYFADYLKQKYGLNFAVSNQLEIIDGKLTGKVLGKVVDAQHKADTLQ
                     NLATTFNIPPNQWVAVGDGANDLPMLKTASLGVALHAKPKVQAQADFVVNFGDLTALC
                     LLLNANHLFQH"
     gene            31656..32147
                     /locus_tag="PXF40_000565"
     CDS             31656..32147
                     /locus_tag="PXF40_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HDL5801940.1"
                     /translation="MPSFDIVSEITMHEVRNAVENANRVLSTRYDFRGVEAVIELNEK
                     NESIKLTTESDFQLEQLIEILIGSCVKRGIEHSSLDIPTESEHHGKLYSKEIKLKQGI
                     ESDMAKKITKLIKDSKIKVQAQIQGEQVRVTGKSRDDLQAAIQLVKGADLGQPFQFNN
                     FRD"
     gene            32232..32408
                     /locus_tag="PXF40_000566"
     CDS             32232..32408
                     /locus_tag="PXF40_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5363 domain-containing protein"
                     /protein_id="HDL5801941.1"
                     /translation="MMSEQTEKKGWFKKALEKYDAFCDELGVNQGACRGCVPVVKFDP
                     EPEKEQPEKSENKT"
     gene            complement(32456..32752)
                     /locus_tag="PXF40_000567"
     CDS             complement(32456..32752)
                     /locus_tag="PXF40_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801942.1"
                     /translation="MKKHHIIILTLASASVVACSSNTPVQVVNGDKNIDYSQPKTIYI
                     SETNTQPPALTKQEKIKPSNATALCFNGSYSTDIQNPCKKDGGVKQYFAHHHAN"
     gene            complement(32829..33797)
                     /gene="mdh"
                     /locus_tag="PXF40_000568"
     CDS             complement(32829..33797)
                     /gene="mdh"
                     /locus_tag="PXF40_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HDL5801943.1"
                     /translation="MCQSKKVALLGAAGGIGQSLALLLKLNLPAKSELSLYDISPVTP
                     GIAVDLSHIPTDVKVTGFAGEDPTEALKDADVVVISAGVARKPGMTRADLFNTNATIV
                     HNLVEKAAKVCPKACIAIITNPVNTIIPIAAEVLKKAGVYDKNKLFGVTTLDVIRANT
                     FVAEAKDVNVKYVRVPVIGGHSGTTILPLLSQATVNGLKLEFTQEQIEQLTHRIQNAG
                     TEVVEAKAGGGSATLSMAQAGAEFALGLVRALIGEDVIRYAYVDNANGETSPAFFAYP
                     IRLGTNGVEKVLPIGNLSEFEKDQLEQLIPVLNDEIQLGQTFNKNA"
     gene            33993..34454
                     /gene="argR"
                     /locus_tag="PXF40_000569"
     CDS             33993..34454
                     /gene="argR"
                     /locus_tag="PXF40_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HDL5801944.1"
                     /translation="MDKIDSLSEAFKSLLKEEKFGSQSEIVAALQEMGFDNINQSKVS
                     RMLSKFGAVRTRNPKMEMVYQLPVELSVPTTSSPLKNLVVDIDHNDALIVVKTSPGAA
                     QLIARLLDSMGKAEGILGTIAGDDTIFITPVRNVQIEKLVKNVTQLFETSL"
     gene            34504..35400
                     /locus_tag="PXF40_000570"
     CDS             34504..35400
                     /locus_tag="PXF40_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HDL5801945.1"
                     /translation="MHIFITGGTGFIGRELIQQLKSENHHFTLLTRDTEAKSDDLQIN
                     YCYSLDELVDLNDFDAVINLAGEPIFDKRWTDEQKQKLIESRVNLTNKLSQLMNASSN
                     PPHTFLSGSAIGIYGDLPPSANFYTESTACYQDCFTNRLCQQWEAAALKAASDKTRVC
                     LIRTGTVFSPEGGALKKILPLYRCGLGGKLGSGKQYWAWISRRDHVQAVIFLLKNANC
                     SGAYNFVAPNPVRNEEFNRILANAVNRPAFFTVPEFALKLGLGERACLVLDNQQLIPE
                     KLLAASFVFQDPILTENVFLNP"
     gene            35445..37643
                     /gene="uvrD"
                     /locus_tag="PXF40_000571"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             35445..37643
                     /gene="uvrD"
                     /locus_tag="PXF40_000571"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HDL5801946.1"
                     /translation="MDFSLLLDGLNDKQREAVAAPIGNYLVLAGAGSGKTRVLTHRIA
                     WLIGVENVPESNILAVTFTNKAAAEMRHRIEYTLSQSGDNRLFGMWVGTFHSIANRLL
                     RSHYLDADLPQDFQIMDTEDQQRLLKRLLKLHNIDEKHFPPKHVAWYINAQKDKGKRA
                     KDIDHYNDPNEKKLVEIYQIYQDACDRAGLLDFAELLIRAYELFKTKSTILQRYQQRF
                     QQILIDEFQDTNNIQYDLIRLLAGDVGKVMIVGDDDQSIYGWRGAQVENIQRFLNDYD
                     NAQTIRLEQNYRSTGNILSCANELIANNDNRLGKNLWTDSGDGEPVDIYCAFNELDEA
                     RFVASQIKQWKEDEGDLAECAVLYRSNSQSRVIEEALIQANIPYRIYGGMRFFERQEI
                     KDALAYLRLIANRQDDAAFERVINTPTRGIGDRTLDTLRQITRGRQITLWQAIQVAVQ
                     EEQLSGRATSSLLRFVELINALDQETEQMSLAEQTDFVIKKSGLYEMYKQEKGEKGEV
                     RIENLEELVTATKQFVKPDEAEELTDLTAFLTHASLEAGEAQASQHEDYVELMTLHSA
                     KGLEFPRVFIVGVEEGIFPSGMSFDEGRLQEERRLAYVGITRAKKKLTISYAESRRLY
                     GKEERHVPSRFIAELPEEHIREVRLRGSINRAASFNQANSFAKNPTKTTASFLNDDTW
                     KMGQKVNHAKFGQGTIINVEGSGEATRLQVAFVGNGIKWLIAKMANLERI"
BASE COUNT        11153 a         7244 c         8242 g        11149 t
ORIGIN      
        1 taaaaaaatt tttgcaaatt gttaataaaa tttaaccgct tgaagggaaa ttggattaac
       61 taattatggt taatttatgt taagagggaa ttgaaatctt gatttatttc aaattttacc
      121 gcgggaatat gcaaaaaata gggggttttc ctagccagaa ggggagcttt ttaggtaaaa
      181 taagaagatt atttttagtt aaccttttgt taagaaaaga taaaggttga tcacagattt
      241 gagaacttaa tgtggctttt aaaaataggt gggggaccat tgtttatttt taagtaaagc
      301 tgcggctcaa tagaagcgat tgcgttagcg caatcatatt ttttaaccca aaagaaaagt
      361 agtgcaaaca atatgattac aatcaaaaaa ggcttagatc ttccgattgc gggaaaacct
      421 gagcaagtaa tccataacgg taataccgtt actgaagttg ctatgcttgg tgaagaatat
      481 gtgggtatgc gtccttcaat gaaagtgcgt gaaggcgatg tagtaaagaa aggtcaggtt
      541 ctttttgaag ataaaaagaa tccgggcgtg gtatttactg cccctgcaag tggtaccgta
      601 acggcaatta accgtggcga gaagcgtgtt cttcaatcgg tagtaattaa agttgagggt
      661 gatgagcaaa ttacctttgc tcgttatgaa gccagccaat tagcttcatt aacttcagag
      721 caagtaaaac aaaaccttgt agagtcaggc ttatggacgg ctttccgtac acgtccgttt
      781 agcaaagtgc ctgcattaga tgcagaacct tcctctattt ttgtcaatgc gatggatacc
      841 aatccacttg cagcaaatcc ggaagtgatt attgcagaac accaacaagc tttctttgat
      901 ggcttaactg tattaagtcg tttatttgaa agtaaaaaag tgattcatct ctgtggcagt
      961 gcagactcaa atattttaaa tgcggcacaa agccgtcaga tcaataatgt ggaaactaac
     1021 cgctttaaag gtccgcaccc tgcaggtctt tctggtacgc atattcactt tattgacccg
     1081 gtaggtgcaa ctaaacaagt ttggtattta aattaccaag atgtaattgc tatcggtaaa
     1141 ttatttacga ccggtgagct atttactgac cgtgtagtcg cattagccgg gccacaagtg
     1201 aaaaatccac gtttggtgcg tactcgttta ggggcgaatc tttcacaatt aacagccaac
     1261 gaattaaatg cgggtgaaaa ccgtgtcatt tcaggttctg tgttaagtgg tgctatcgca
     1321 acgggagtac acgactattt aggtcgttac gcattacaag tgtctgcttt attagaaggg
     1381 cgtgagaaag cgttcttcgg tatgattgct ccttactctg ataagtattc aattacgcgt
     1441 actactttag ggcattttgc gaagaaatta tttaacttca caacagcagt tcacggtagt
     1501 gagcgtgcaa tggtaccaac aggggcttat gagcgtgtaa tgccgttgga tatcattcca
     1561 acactcttat tgcgtgattt agcagctgga gatacagact ccgctcaagc tttaggctgc
     1621 ttagagttag acgaagaaga tttagcgtta tgtacttttg tgtgttccgg taaaaacaac
     1681 tggggaccat tattacgtca agcgttagat aagatcgaga aggacggtta aaaatgggtt
     1741 tgaaaaatct ttttgaaaaa atggaacccg ctttccataa aggtggaaag tatgagaaat
     1801 ggtacacgct atttgaagct gcctatacga ttttctatac accgggtacg gtcactcgta
     1861 aagatgctca cgtgcgtgat gcgattgact ctaagcgtat gatgttaatt gtatggttag
     1921 cgttattccc tgcgatgttc tacggaatgt acaatgttgg tgcacagggt attctagcgg
     1981 cactcaaaat gggaacatta acggatttag ttgctaacaa ctggcactac agcttagccg
     2041 atagtttagg ctctgtagct gatgcaggct ggggaactaa aatgttgctg ggggcaacct
     2101 atttcctacc aatctactta acagtatttg cagtgggcgg tttctgggaa gtggtgtttg
     2161 caatggtgcg taagcacgag atcaacgaag gtttctttgt aacctctatc ttactagcat
     2221 taattgttcc tccaacatta ccgttatggc aagcagccct tgcaactacc tttggtgttg
     2281 tggtcgcaaa agaagtgttc ggtggcgtgg gtaaaaactt tatgaaccct gcgttagccg
     2341 gtcgtgcttt cttgttcttt gcttacccgg gtcaaatttc aggtgatgca gtatgggttg
     2401 ccgcagacgg cttctcaggt gcaactgcac tttctcaatg ggcagttggt ggtcaaggtg
     2461 cattacagca cgttgcaacc ggtgaaacca ttacttggat ggatgcgttc ttaggtaata
     2521 ttccgggttc tatcggcgag acctctacct taatgttgat tattggtgct gcaatcattg
     2581 tatttgcccg aattgcttct tggcgaatta ttgccggtgt aatgattggt atggcggcaa
     2641 ctgcgacatt atttaatgta atcggttctg ataccaaccc attattctct atgccttggc
     2701 attggcattt agtattaggc ggttttgcga tcggtatgtt ctttatggca accgacccgg
     2761 tatcagctgc atttaccaac aaaggtaaat gggcatacgg tatcttaatc ggctttatgt
     2821 gtgtattaat ccgtgtggta aacccagcat accctgaagg tatgatgtta gcgatcttat
     2881 ttgctaactt atttgctcca atctttgact atttagtagt tcaagggaat atcaaacgca
     2941 gattagcgag ggtagcaaac aatggctaaa tttaataaag atagcgttgg cggaacgcta
     3001 accgttgtag ttttattaag tttaatttgt tctttgattg tggcaggtgc ggcagtaatg
     3061 cttaaaccaa cacaagatat tcagaaacaa cttgataaac agaaaaacat cttacaagcg
     3121 gccggtttat tgcaaaaaga taccaatgtg caagaaacct ataccaaatt tattgagccg
     3181 aaaattgtcg atttagcaac aggtgattac gttgagggtg taaccggttt tgatgctcgt
     3241 gcagcagcta aagatcctgc tcaaaatgta gttatcgcac ctgaagatga taaggcgaat
     3301 atcaaaacgc gtgctaaata tgctgaagtt tatttagtaa aagatgaatc tggcaaaacg
     3361 actcaagtag tattaccaat gcacggtaac ggcttatggt caattatgta cggtttcgtt
     3421 gcggtacaac ctgatgcaaa taccgttaac ggtattactt actatgaaca aggtgaaacg
     3481 gcaggcttag gtggcgaaat tgcaaacccg aactggcaga aaaactttgt aggtaaaaaa
     3541 ctgtataacg agcaaaacca agttgcgtta agagtgggta aaggggcatc tgcagataaa
     3601 gatcacggtg ttgatggttt atctggtgca acattaacct cgaacggtgt tgatggttca
     3661 ttcaaatact ggtttggtca aaatggtttt ggtccatatt tagcaaaatt taaagcagcg
     3721 gcaggagcta actaatggca gacaataaca atcttaaaaa attattgtta tcgccaattg
     3781 tcgataacaa cccgatcgca ttacagatct taggtatttg ttctgcgtta gcggtaacga
     3841 ctcaattaca aacagcagta gtaatggcga ttgcggtaag tttagttact gcattctcaa
     3901 gtatgttcat ttcaatgatt cgtaactata ttccaaatag tatccgtatc attgtgcaaa
     3961 tggcgattat tgcatcatta gtaattttgg ttgaccaaat cttacgcgct tatgcttacg
     4021 atctgtcaaa acaattatcg gtattcgtag gccttattat taccaactgt atcgtaatgg
     4081 ggcgtgcaga agcattcgcg atgaaatcag gcccggttga aagttttgtt gatggtatcg
     4141 gtaacggttt aggctacggt gcaatgttaa ttatcgttgc ctttttacgt gaacttatcg
     4201 gttcaggtaa aattttcggt atcaccattc ttgaaactgt tcaaaatggc ggttggtatc
     4261 aagcaaacgg tttattctta ttagcaccaa gtgcgttctt tattatcgga tttgtgatct
     4321 gggcgattag aacgtggaaa ccggaacaag tggagaaata agatggaaca tcttctgagt
     4381 atctttgtta agtccatatt tattgaaaat atggcacttt ctttcttcct tggtatgtgt
     4441 acattccttg cggtgtctaa gaaagtttca actgcttttg gtttaggtat tgcggtaatt
     4501 gtagtacttg gcattgcagt tccagctaac caattagttt atacccacgt attaaaagag
     4561 ggtgcattag tagaaggtgt ggatttaagc ttcttaaact ttatcacttt catcggggtt
     4621 attgcggcac ttgttcaaat tctggaaatg attttagaca agtttttccc ggcactttat
     4681 agtgcattag gtatcttctt accacttatc accgtaaact gtgcgatttt tggtggtgta
     4741 tcgtttatgg tacaacgtga gtataacttt gtagaatctg tggtttatgg cgtaggtgca
     4801 ggtacaggct ggatgttagc catcgttgcc cttgcaggtt taaccgagaa aatgaaatat
     4861 tccgacgtgc cggcaggctt acgtggttta ggtattacct ttattacggt aggcttaatg
     4921 gcgttaggct ttatgtcatt ctcaggcatt caattataag gagcatatcg tggatagtaa
     4981 ttttattttc ggtattatcg catttacggc tctggtatta gtgcttgcgg tgatcattct
     5041 tttcgctaaa tcaaaattag ttgattcagg tgatattacc atctcaatca acaacgatcc
     5101 ggaaaaaggc attacgctac cggctggtgg aaaattactc ggtgctttag caagtaaagg
     5161 gattttcgtt tcgtcagctt gtgggggcgg tggctcttgc ggtcaatgta aagtacaagt
     5221 gaaatcaggc ggtggtgaaa ttcttccaac tgagttatcg cacatttcta agaaagaagc
     5281 gaaagaaggc tggcgtttag cttgtcaggt aaacgtgaaa tcttcaatgg acgttgaact
     5341 tccggaagag atctttggtg tgaaaaaatg ggaatgtacc gttatctcaa acgataacaa
     5401 agcaaccttc atcaaagagc ttaaacttca aattcctgaa ggcgaagaag taccgttccg
     5461 tgcgggtggt tatatccaaa ttgaagctga acctcatacc gttcattata aagacttcga
     5521 tattccaaaa gagtaccacg aagactggga taaatttgac ttatggcgtt atacttcaaa
     5581 agtggacgag catattattc gtgcatactc aatggcttca tatccggaag agaaaggcat
     5641 tattatgctt aacgtgcgta ttgctacacc tccaccacgc aatccggacg taccgccggg
     5701 tcaaatgtct tcctacattt ggtcattaaa accgggtgat aaagtaacaa tttcaggtcc
     5761 attcggtgag ttcttcgcta aagataccga tgcggaaatg gtctttatcg gtggtggtgc
     5821 aggtatggca ccaatgcgtt cacatatctt cgaccaatta aaacgtttaa aatctaaacg
     5881 taaaatgtca ttctggtatg gtgctcgttc tgagcgtgaa atgttctatg tggaagattt
     5941 tgatggtctt caagcagaaa acgataactt caaatggtat gtggcacttt ctgatccatt
     6001 accgggcgac agagaagatt acttccgtgg ctttattcat aacgtgcttt atgagaacta
     6061 cctcaaaaac cacgaagcac ctgaagactg cgaatactat atgtgtggtc caccggtgat
     6121 gaatgctgcg gtaatcggta tgctgaagag tttaggtgta gaagacgaaa acatcttatt
     6181 agatgacttt ggtggttgat aaaccttaac ttctgactac aagcggtcaa atttgcaaaa
     6241 ttgaccgctt gatttaattt atattattaa gttttggtaa tttaataatg tgaattttaa
     6301 ggggaagcaa atggaacaac tggatattac ggtacttgaa aatgccttca attcccttga
     6361 gaaaacgatt gtcagccttg agaatcaagc gtggtttaac cggcaagaag caattattca
     6421 agacactttg attgcaggag caatccaaaa atttgaattt gtttacgaat tgtcgataaa
     6481 aatgctcaag cgtcagctca aaaacattga gtcaaatgac actgatattg atagcaccga
     6541 gttccgtgat attttgcgaa tggctgctca atatgggctg attgaatcac cggaagtttg
     6601 gctggattat cgcaaaatgc gaaatattac ttcgcatact tatgatcaaa ataaagcaca
     6661 gcaggtttat aacggaattt caaactttct ggaaagtacg tattttttag ttaaacagct
     6721 ccaaaaacgc aatagctatg attgatttaa ctgagtcaca acgccaacag gtgttggata
     6781 ttttcaaaaa atacttgcct gatacacccg tttgggtttt tggctctcgc attaaaggca
     6841 cagccaaagc ctattcggat cttgatttag cattaatcac caaacaaccg ctcacaattc
     6901 ggcaacaaac agagttagag cttgcgttta cggattctga cctacctttc acagtagatc
     6961 tgattgactg ggcaagttgc aacgaatcgt ttaaacaaat tattttacag cgatatgaag
     7021 tgcttattta atcgctaaat atgctataat ttccccaatt tttaactttt gtgacaccaa
     7081 tgaaaaaatt ttttcttctt ttaattgctt tttttacttt aagtgcttgt gaaaaagccc
     7141 ctgagcaaat tacgctgtca ggcaaaacca tgggaacgac ttacaccgta aaatatattg
     7201 ataatggtga agtggagaat ttgatttcgc ctgaaaaaat gaaaaatgag ctggatggct
     7261 tattgattga ggtgaataat cagatgtcca cctaccaaca agattcggaa attagccgtt
     7321 ttaatcaagc aaagcaggca aatcaagcgg tcgaaatttc gcaggatttt gcaaaagtgg
     7381 tacaagaggc aatccgttta aataaagtaa ccgaaggggc tttagatgta accgttggtc
     7441 cattggtgaa cttgtggggc ttcgggccgg ataaacgctt aaataaagtg ccgtctgatg
     7501 aacaaattgc agagcgttct gcttatgtcg gcattgataa aattttgctt gaaatgagta
     7561 gtaaacccaa gctcaccaag tcagcagcta atctttatct agatttatcg tctattgcaa
     7621 agggtttcgg tgtagataaa ttagccgagc atcttgaaac tataggtgtg agcaactatt
     7681 tagttgaaat tggtggcgaa ttacgaggca aaggaaaaaa tttacaaggc ttagattggc
     7741 ggattgcaat cgagaagccg gtaatgacac aaggtcaagc cgcacaaatt accgtgccgt
     7801 tgcacaattt ggcgatggca acttcgggca attatcgtaa ttattttgaa gatgaaaaag
     7861 gcaaccgtct ttcacatatt atcgacccaa aacagttacg tccggtaaac cataatttag
     7921 cctctatcac cgtatttgcc ccaactacaa tgacggcaga cggcttatca accggtttat
     7981 ttgttttagg agcggaaaaa gcattagcag tggcagagcg tgaaaaatta gctatttttt
     8041 taattgttaa aaacggcgat aaatttgaga cacaaatgtc gagcgaattt agcaaactta
     8101 ttcaatcaca atagttggag tgaaaaatgg aaactgtatt attaaccttt ggcttttttg
     8161 tagccgtaat ttttgcgatg tcgattggtt ttatcgtgaa aggcaaaacc atcaaaggca
     8221 gctgtggcgg tatcaccgct ttaggtatga aaaaaatgtg cgactgcgaa gaaccttgcg
     8281 ataacctaaa atctaaaatc gcagacggca cagccgaccc tgaagaagtg gcacgtttta
     8341 ataaagagcc acaattttat gaagtgaaat aatatgaata gagatattcg ctggaaacag
     8401 cggtttgata actataaaaa atcagtaagt taccttcaag cagaagcaga aaaatacgct
     8461 gataccgaca ttgatgtaat taaaaaagga attatccaga gttttgagat tacacacgag
     8521 ttagcgtgga agttaatgca agatatttta aaatgggaag gtgaagttga tatttatggt
     8581 tcaaaaacgg cttctcgttt ggcttttaat cgtgggctaa tcactcaggg cgaagtttgg
     8641 ctagaaatga taaaaagccg caatataaca gttcatactg acgatgaaac tattttaact
     8701 gaagaattta ataaaattat caaggcgtat ctgcctttat ttattgaatt tgaacagcga
     8761 gtagaaacac tatgccaaac tttggactaa gcgaacgagc gacgaaaact attaccgata
     8821 ttcttgcgaa ataccctgaa gtggagcaag ccattattta cggctcgcgt gctaaaggta
     8881 attatcgtga aggctcagat gtagatctta cttttaaagg aaaagatctt acttacgata
     8941 ttgtcaaacg catttggggt gatttagacg attccgactc gccctattta tttgacttgt
     9001 cgatttatca tcaattaacc aatgccaact ttattgaaca tattgataga gtaggaaaag
     9061 tcttttacca aagagaactc taatttctta ataggcaagc ggttcatttt gcaaaatttt
     9121 ttgcaaattt caccgcttgt tgtttttatt attaaccaat gtgcttcgcc ttaaccgaag
     9181 ttacgggaga tttatgacaa ctcaattaac ctcaaaaacc tacgacactc atttccctaa
     9241 attaacccca gaacaacttg ctgaaaacag caagaaaaaa gtcattatcg gtatgtccgg
     9301 tggggtggat tcctcggttt ccgcttttat tcttcaacag cagggctacc aagtggaagg
     9361 cttgtttatg aaaaactggg aagaagatga tgatacggat tattgtaccg ccgccgccga
     9421 gcttgccgat gctcaagcgg ttgccgataa actgggtatg aaactgcata aaattaattt
     9481 tgcagcggaa tattgggata atgtatttga atatttcttg gcagaataca aggcaggaag
     9541 aacgccaaat ccggatattt tgtgtaataa agagatcaaa tttaaagcct ttttggaata
     9601 tgcggcagaa gatcttggtg cggattatat tgcgaccggg cattacgtcc gccgtacgag
     9661 cgatgatcaa gatgcgaaac ttttgcgtgg cttagatgaa aacaaagatc agagttactt
     9721 tttatatgcg ttaaataaaa agcagatcgg gcagagttta ttcccagtgg gtgaaattga
     9781 gaagccgatt gtgcgagcca ttgccgaaga cctaggatta gcaaccgcaa agaaaaaaga
     9841 ttctaccggc atttgtttta tcggtgagcg taaatttaaa gatttcttag ctcgttttct
     9901 accggctcaa ccgggggaaa tccgcaccgt tgagggcaaa ttagtcggtc gccatgatgg
     9961 gctgatgtat cacacgcttg ggcaacgcaa aggcttgggt atcggtgggg tgaaagggct
    10021 aagtgaagat ccgttttatg tggtggagaa agacttaatt aacaatgtat tgattgtggc
    10081 acaaggacac gataattcag ccctgctttc aagtggctta attgcgaaac agctcacttg
    10141 ggtggatatg cagccgttgc gtgaaaattt acgctgcacg gtaaaaaccc gttatcgtca
    10201 agcagatatt gcgtgtgaaa tccaagtgat tgatgatgaa accattcgag tgatgtttga
    10261 tgaaccgcaa attgccgtga cgccggggca gtctgccgtg ttttacttag gtgaagtttg
    10321 cttaggcggt ggcattattg agtcacaatt aaaatagtta taaataaata ttgaaatatt
    10381 ttgcatattt atgcaaaata agcgaaaagt taaggcggta aaacgccttt ttcattttga
    10441 tcgatacaaa gaataatata caaggaacag actgtggcac tttggggtgg acgctttaca
    10501 caacaagcag acgcaaaatt taaatatttt aacgattcat tacgttttga ttaccgcttg
    10561 gcgattcaag atattgaagg ctcaatcggc tgggcaaaag ccattacttc ggtaggtatt
    10621 ttaacggtag cagaattaga acaactaatc gcagcattaa aagaggtgag agcagaggta
    10681 gaatctaacc ttaccatcat cttaaaagat gatgcggaag acattcacag ctgggttgaa
    10741 tctaagctga ttgaaaaagt gggcgattta ggtaaaaaat tgcacaccgg gcgtagccgt
    10801 aatgaccaag tagcggtgga tattaaaatg tggtgcaagg tgcaagcggt ggcattgcaa
    10861 gaaagaatcc gagctttgca agagcgtttg gtttccgttg ccgaagaaaa tcaagagtcg
    10921 gtgatgccgg gctataccca tttacaacga gctcagcctg tgaccttcgc tcattggtgt
    10981 atggcgtatt atgaaatgct agaacgggat ttcagccgtt tgagtgatgc taataaacgt
    11041 atgagcactt gcccgcttgg ttcaggggca ttggctggta cggcttacgg cattgatcgt
    11101 gacttattag cccgtgattt aggctttgaa gaagccacac gcaacagttt agacagcgtg
    11161 tcagatcgtg accatatttt agagctgctc tctactgcct cgatcagtat gatgcacctc
    11221 tctcgctttg ctgaagattt aatcattttt aatagtggcg aatcaggctt ccttgaaatg
    11281 tcggatcgtg tgacctcagg ctcatcactt atgccacaga agaaaaaccc tgatgcttgt
    11341 gagctgattc gtgggaaatc cggtcgggta tttggggcat taaacggttt attaactaca
    11401 ctcaaagggt taccacttgc ttataataaa gatatgcaag aggacaaaga gggtattttt
    11461 gatgcgttgg aaacttggca ggcttgttta gaaattgcag aacttgtact ggttgatatt
    11521 caagtgaata ccgaacgcac ccgagaagcc gctcagcaag gttatgcgaa tgcgaccgag
    11581 ttggcagatt atttagtggc gaaaggcgtg ccattccgtg aagctcatca tattgttggc
    11641 gaagcggtgg tttacgcaat cagcaaaaaa gagccacttg aagcattaag cattaacgaa
    11701 ttccagcaat tccatcattc gattggcgat gatgtttacc caattctctc gttagaatct
    11761 tgcttagaaa aacgttgtgc caaaggtgga gtgaacccac aacgtgtggc agaggcgatt
    11821 gcggtagcca aagccaattt agcttcaaag taaaaccgga tacaagcggt catattttgc
    11881 aaaaaaattg aaaaatatga ccgcttgccg attaaatttt caatttttta cgcattaaga
    11941 ttgcaaaata ggcattacct ctttaaactt ccgaataatt tttgaatttt atttctacta
    12001 ctttctttaa agagttttat atgacggaat cagttaattc tactcaagct ggtacagcac
    12061 tttctttagg gcaacaatta aaagcggctc gtgaagcgtt aaatctctct attacagatg
    12121 ttgctcaaaa aaccaactta aaaaaatcac atattgaatc acttgaaaat gatatcttta
    12181 ttctacaaaa tgttgcccca acttttgtgc gtggctatgt gcgtaattat gtgaaatttt
    12241 tgcgtttacc tgaatccctt atttcgagcg ttaattatgg tgaagtcact attccaaaag
    12301 aagtcactaa agtttcttca gtaaaacctt catcaaattc acaaggtaaa accttaaagt
    12361 atttaacggt attagtattg cttgcggcat taggaatgac attactttgg tggtggcaag
    12421 ggtatcaaaa agaacaggaa aatcgcgagc aatttgttag ctctgcacca gttgctgaag
    12481 tggcgaatac cgctacaaat aatgatgctt cagcacaaac ttccgtgcct gttcagcaac
    12541 ctattcaggt ttcagagcag cctgctcaag tagcagaaac ggtagttgca gcagaaccgg
    12601 cattaactga aaaagtagag cctacacaag cagcatcatc acctgtaaca caagaagatg
    12661 ttaaagtggt agaagaagtt aaacaagctg atgccaccac tgcacaggtt gaggcagtta
    12721 atgttttaca gcaatctcaa tcggaacaag cccctacaga acagcctgtt gcggtaacga
    12781 atgatgagct tcgtatcgaa attaccggtt cacaaagctg gattacagtg cggggtgcta
    12841 aaaataaacg tttagcagaa aaattatata acaatggtga gactttaagt ttcaatgaga
    12901 atgagcaata tcgtttaacc attggtgcgc ctgccaatgt aaaagtgtac tataaaggtc
    12961 aagaagtacc attgaaaatt gatgggcgtg tagctcgtat tcatttaccg ttacagtaag
    13021 cttgatttaa cgatgaaacg cacgtaaagc tagcatttaa cgatagctgt ctttacgagc
    13081 gttttctgtt tttataaatt ttcacaatta gctaaaaata tgatacatca atcacctatt
    13141 aaacgtcggg tatcgaagaa aatctatgtg ggtaatgtgc ctgtaggcgg cgatgcaccg
    13201 attacggttc agtcaatgac caacacccgc acaaccgatg tggaagccac cgttgctcaa
    13261 attaaatcgc tggaacgggt cggggctgat attgtgcgtg tgtctgtgcc gacaatggac
    13321 gctgctgagg catttaaagc gattaaacaa caagtgagtg tgccattggt ggcggatatc
    13381 cacttcgatt accgcattgc gttgaaagtt gccgaatatg gggtggattg cttgcggatt
    13441 aacccgggta atatcgggaa tgaagagcgg atccgcacgg tggtagattg tgccagagat
    13501 aaaaacattc cgatccgaat cggggtaaat gccggatcat tagagcgtga tttgcaggaa
    13561 aaatatggcg agccgacacc acaggcatta ttagaatcgg cattacgcca cgttgatcac
    13621 ttagatcgcc ttaactttga tcaattcaaa gtcagcgtga aagcctcaga tgtatttcta
    13681 gcggttgaat cttaccgact tcttgcaaaa cagattgatc agcccctgca tttaggtatt
    13741 actgaagcag gcggagcgag agccggttcg gtgaaatcgg cggtaggctt aggtctgttg
    13801 ctagcggaag ggattggtga taccttgcgt gtgtcattag cggctgatcc tgttgaagag
    13861 gtgaaagtcg gttttgatat tttgaaatcg ctgcgtattc gctctcgtgg gatcaacttt
    13921 attgcttgcc caacctgctc ccgccaagaa attgatgtga ttgcgacggt aaacgagcta
    13981 gaacaacgtt tagaagacat tatcacgccg atggacgttt cgattatcgg ctgtgtggta
    14041 aacggtccag gagaggcgtt ggtgtctgat ttaggggtaa ccggcagcaa taaaatgagc
    14101 ggcttttatt tagatggcgt tcgtcaaaaa gagcgttttg acaacgcaaa attaatcgac
    14161 caattagaag ctaaaattcg tgccagagtt gcacaacaac ataatcgtat agatattgaa
    14221 caaataggat aaatatagtg gcaaaaacaa ttcaagcaat tcgaggaatg aacgactgct
    14281 caccaagtga gtctccatta tggcaatggg ttgaacagaa agtgcgtaat gtgctggcaa
    14341 gttacggcta ttcggaagta cgtatgccga ttgtagaaag cactccgtta tttgcccgtg
    14401 ccattggcga agtaaccgat gtggtgtcga aagagatgta cacgttctgg gataacgatg
    14461 agcaattaac gctccgcccg gaaggtacag ccggttgtgt gcgtgcagcg attgagcgtg
    14521 gttggatcta caataatgag caacgcttat ggtatatggg gccgatgttc cgccacgaac
    14581 gtccacagaa agggcgttac cgccaattcc accaagccgg tgttgaagtg tttggcattg
    14641 caaatccgga aattgatgcg gagttgatta ttctcaccgc acgcctatgg aaagagttag
    14701 gcatcgatca acatgtttct ttgcaactta actctatcgg ctcgttagaa gctcgtgcaa
    14761 attatcgctc agcattagta aaatttttag aaaatcacac cgctttaatg aacgaagaag
    14821 agaaagagcg tttggtgaaa aacccgctac ggattttaga taccaaaaac gaagcactac
    14881 aaaatgtatt aaacgatgcc ccaaaactgc tcgattattt agatgatgac agccgtgaac
    14941 attttaccca actttgtgcc ttacttgatg caatgggaat ccgttacgaa gtcaatccaa
    15001 aattggtgcg tggtttagac tattacaata aaaccgtgtt tgaatgggtc acttcagcct
    15061 taggctcaca aggcaccgta tgtggcggtg ggcgttatga cggcttagtc gaacaactcg
    15121 gtggacacgc aacccaaggc gttggctttg caatgggctt agagcgttta gtgctgttgg
    15181 tacaagaggt gaataaagag attgatttac caaaaacggt ggatgtgtat atcgtattct
    15241 ccggtgaagg ggcaacacta aatgccttcc aacttgcaga gcagattcgt agcgaattgc
    15301 cacacgttgg cgtaatgaca cactgttccg gcggtaaatt ccaaaaacaa tttaagcgtg
    15361 cagataaagt agaagcgcaa attgcgttag tgattggcga aagcgaagtg gctgaaaagc
    15421 aagttgttat caaagattta cgttcaggag cagaacaaat cacgattgct caatcagagc
    15481 tgattgctga gctatctaaa cgattttagg agaaaaagat gagtaacgaa tatttaaata
    15541 aaaccgaaga gcagcaattt gaagatgcca aaaattggtt taaagagaac gggacaccga
    15601 ttttggtggc gattatttta gcttgtgcgg caactgccgg ctggaatttt tggaaaaatc
    15661 accagcttga aacggcacaa aaaacatccg cttcatacca aagcgtgatg gagagttatt
    15721 tgcaaaatcc aagcaaaaat caaccgcttg ttgagaaatt tattgccgat aataaagatt
    15781 caagctatgc cgcttttgcc caatttgaag tagctaaaca agcggtcgaa aaagggaatt
    15841 tttctgcggc aaaaacagcg ttacagtcag ttttgactta ttcggattca accttacaat
    15901 ctatcgctcg ttttcgtttg gctcaaattg acttccaact aaaatcttac gatgaagcac
    15961 tggcaagtct ggctcaaatt caagataaag cgtgggaatt gcgtaagcaa attctaacag
    16021 gcgatattct tgcagcaaaa ggcgatattc ctgcggcgaa aagtgcttat gagcaagcta
    16081 aaacgaccgc aaatcctcag gaacaaacct taattgatgt acgtttgaat aacttataaa
    16141 aacaaagcct gattgaaata aaatcaatca ggcttttttg ttggtttagt gttgctgtga
    16201 attataaacg cattggcata atcacatatt cggcagagct gttgtcgcaa tcttcaatta
    16261 agcaactaga acttgaatca actaagctaa aacgcacacg ttggcatttt aaggtgttta
    16321 acacatctaa tacatagcta acgttaaagc cgacttccat ttccgggctg tcgtaggcaa
    16381 catcaatgat ctcttccgcc tcttcttgct ccggattgtt tgcggtaatt ttgagtaaat
    16441 tattgcttaa ggttaaacgc acccctctaa atttctcatt agaaagaatc gctgcacgca
    16501 ttaatgcccg tttaagggtt tcggtttccg cttctagaat gcgatctgca ttgcgaggca
    16561 gaactcggcg gtaatccggg aatctgccat caatcagttt agaggtaaat acaatgccgt
    16621 tcattgtaat acggatattg cttgaaccga tttccaaacg cacggtttca tcgttgctgg
    16681 caaccaagcg ggaaagctca agtacggctt tgcgtggcac gataaccgaa tgagtcaaaa
    16741 gctcttgatt tagcaccatt gtgcaaaccg ctaaacggtg cccatctgtg gcaacggtgc
    16801 gtaataaatt gccttcggtt tcaaatttca ttccgtttaa gaaataacgg gcgtcttggt
    16861 ttgccattga gaattgggtg gcatcaatca gacgggcaag ggtagattga tcaatcgaga
    16921 aatccacttc cggtttccaa tccatcaaat tcgggtaatc acttgccggt aatgtagcta
    16981 aactaaattt actacgtcct gctttgataa tggctttatc ttcttcaaat tgtaccgaaa
    17041 tcacgctgtc atcaggtagg cttttactga tatctaggaa ttttttagct ggaatggtaa
    17101 attttccggc aaaatcgacc gcttgtagca gttgtgcttg ggtggttaat tccacttcta
    17161 aatcggtacc ggttaaagat agacgattac cttcaatttc taataaaaga ttgttaataa
    17221 caggcaaagt cggacggcta cttaatacgc cacacacctg ttgtaaaggc ttaagtaatt
    17281 gttctctggt aatggtaatt tgcataatca ttccttcatc gggctaagat gataatttgc
    17341 gtgttaaatg gatataatct tcttggatac cgctttcggt atcgcgtaat tcattaatgg
    17401 ttttgcaggc gtgcatcacg gtagtatgat cccgaccgcc aaattcccga ccaatttccg
    17461 gcaagctgtg gttggttagc tcttttgcca gtgccattgc catttggcga ggacgggcaa
    17521 tgcttcttgc ccgacttttc gatttaatat cggcaacttt tatgccgtaa tattcggcca
    17581 caatgcgttg aatattttca atcgtaatca agtaatcaaa agaggcaaac agatcttgca
    17641 aggtttcacg caccgcatca accgtaatcg ggcgaagggt caatttttgc cacgcaatca
    17701 cacggtttaa tgctccctcc aattcacgca cattggttcg gagtttttgc cccattaaat
    17761 aggcggcatc ttcttgcaaa tctgctccac gttctaaggc tttttggcga agaattgcca
    17821 ctcgggtttc caattcaggt ggctcaatgg tcgcactaat accgccgctt aaacgggatt
    17881 taatcgctgt gtcaatttta tcgatatttt ttggcaaaac gtcagaggtt agaataatct
    17941 gctttctctg ctcaaataaa gcattgagta gatgtaaaaa ctcttcttgt actttcggtt
    18001 tattggcaag aaattgaata tcgtcaatca ttaacacatc aagcgagcgg tagaattttt
    18061 tgattttttc cgcatcgtta ttggaactgt tgatcgcctt aataatatca cgataaaaac
    18121 gttccaaatg aatatatagc acccgagtac ccggtgtgcg tttaactaat tcattgccga
    18181 tagcgtgtaa taagtgggtt ttgcccaaac cggtgccggc ataaaacgag agtgggttgc
    18241 aatggctttc gcctaaatta tccaccactt gttgagccac taatttagct aattggtttg
    18301 agcgaccttg tacaaaatta tcaaaggttt gatttggatt tagcccggtt ttaaagccgg
    18361 tattgctgaa ttctgaactc tcgtttttta gatttgggct gacctttggc tgttctgtcg
    18421 gtttaatccc aacttttaac gtaaccacca aattatcatt tttcgccaaa aaacgggcaa
    18481 gctcggtaat ttccgataaa aatttatctt ttacccagtt ttcaacaaat tgattttgtg
    18541 cataaagtgt aagttcccca ttctcagaac tcgcttgcag aggacgcagc caagtgctgt
    18601 aatcagttgg tgagactttc gtttgtaagt gattaaggca atcagaccaa agggaagaca
    18661 caatttgctc caaaattatt gttattaaag gtcataatga tacctgaaaa aaggggagaa
    18721 atcttgcaaa tttttgagag attttatggg ggcttggaag cgattttaat tggcgaacaa
    18781 gcggtcgttt tttgttgaaa tcttgcaaat tgctaacaaa aaatgaccgc ttgcttagta
    18841 tgatgtgtga tggagttgat taaatatccg tattctccgg caagaaccca ccgctttggt
    18901 gagcccaaag tctggcgtaa acaccgtttt gagcaagcaa ttcttcgtgc gtgccttgtt
    18961 caacgatttc gcctttatct aacacgataa gtctgtccat tgccataatg gtagagaggc
    19021 ggtgggcaat cgcaaccacg gttttacctt ccattaattg cgtgagattt tcttgaattg
    19081 ccacttctac ttcagagtct aacgcactgg ttgcctcatc gagtaataaa atcggagcgt
    19141 cttttagcat cactcgggca atcgcaatcc gttggcgttg tccgccggaa agttttaccc
    19201 ctcgttcgcc aacgtgtgca tcaaaaccgg ttctgccttt ggcatcttgc aggtttggaa
    19261 taaattcact ggcggcagct tgttcaacgg ctttgatcat ctcttcttca gtggcgtttg
    19321 ggcgaccgta catcaagttt tcacgcacag agcggtgtaa cagcgaggtg tcttgagtta
    19381 ctaaaccaat ttgtgagcga aggctttctt gggtaatatc acggatattt tgcccgtcaa
    19441 tcgtgattga accgtcttga atatcgtaaa aacgcaataa taaattggtg agcgttgatt
    19501 tacctgcacc actacgcccg actaagccga ctttttcccc cggttttata gtgaggtcaa
    19561 aatctttcag tagcggtttt ttcggatcgt aggcaaaatc cacattctca aatttaattt
    19621 cgcctttggt tacatttaac ggtttcgcat cgattttatc taccacattg tgtggtttgg
    19681 aaagcgtaat cataccgtct tgtaccgtac ctaaattttc aaatagacga gcaaattccc
    19741 acataatcca ttgtgataag cctttaatgc gtaaagccaa agcggttgag gtggcaatcg
    19801 cccctgcagt tactacgctt gaaccccaaa gccataaacc gatacccgca gttgaaatta
    19861 ttaatgccat cgaggttaga ttagttacgg tttcaattac agtcactaaa cgcatctgtt
    19921 tatgcactgt caccataaat ccttccatcg actctttcgc ataggcagat tcacggttgc
    19981 cgtgcgagaa gagtttgacg gtggcaatgt tagcgtaagc atcggtaatt cgaccggtca
    20041 ttaaacttct ggcatccgat tgctcttgag cagcttgggc taatttcggg acaaagtaga
    20101 taatggttgc cgctaatgag atgacccata aaataaacgg cacgaataac cagccgtcaa
    20161 gttgtaataa aatcacgctg gaggtggtga agtaaaccag cacatacacc aacatatcgg
    20221 cacaagtcat aatcacatca cgcacggaaa gggcggtttg cattactttt gcagacactc
    20281 ttcctgcaaa ttcgtcttga tagaaaccta aactttgccc aagcattaag cggtggaagt
    20341 tccaacgcaa acgcattgga aatacccctt gcagagattg aaagcgaatg ctgctggcaa
    20401 ggtaaacaaa caccactgca agtagggcaa taaaaaacat accgataatc gtccagcctt
    20461 tttctgccca aagttctgtt ggcgagtatt tattgaccca atcgactaaa tcgcccataa
    20521 agcgaaacag aaccgcttcg ataataccga cagctgcaac taatacggtc agtagtaaga
    20581 tataaaaccg cattccttta gtggcatcgt aaataaaagg aatgagacct gattttggag
    20641 ttttcggcat ttcatttgga taggtttcca cccttgcctc aaaccattta aacagttttt
    20701 caaacataaa tttgtgattt ccgaataaaa atgcaggggc aaatagccat ttgcccccga
    20761 aaaaatgtga aaaaattatg gattaagtaa tttttcgtct aaggctaaat cttcgttgcg
    20821 atttatacca atgccggcag ctaatacgtt gcgggcaatt tgatgtgctt cttttaaaga
    20881 atgctctttg taagagccac attgatattc attcagctca gggattgccg atacatcagg
    20941 aattttatgt aacgcatctt ccattgatgc cgtccaagct ttgacaactt cttctgctga
    21001 aggcgatcca atcagtgaca tataaaaacc ggtacgacaa cccattggtg aaatatcaat
    21061 gatctccact tgttcgctat tgaggtgatc acgcataaaa ccggcaaaaa gatgttccat
    21121 cgtgtgaatc ccacgcaccg gtagaatatc aatattcgga cgacagaaac ggagatcgaa
    21181 cacggtaatg gtatcgcctt tcggtgtggt cattgttttt gcaacacgca cggctggtgc
    21241 gttcattttg gtgtgatcta ctttaaaact atctaataaa ggcatttttt actccatcaa
    21301 tattattccg caattccttg atcccaagcc ggggcttcat caggtagttt gcgctgtaag
    21361 aaaaatcgtc tgtttggctg ggcttgaggc ttcaccactt tagtgtaagg ggtagagaac
    21421 tcaataccgc catttaataa ctgcgacatt gtgccggagt tcatacttac accttgcagg
    21481 ctcacgtcca tagtgtaacc tgaagcttgc cagaattggg tattggttct gactaagtgc
    21541 ttgtatttat cttgaatatt gacataaata agcactcgat cgcctaactc acttagccct
    21601 aaacggctga ctattcccac ctgcattcca cggtaaagca ccggtgcttc cggctgaata
    21661 ccgttagcat tggtggtttc gacaataatg gggaaaccgt tggcataggt ggtttttacc
    21721 gtatcggtat ctgcaagaac aaattggttt tgagcttgcc ctgaaccgac atcaaccgta
    21781 atgtaatttt gtagtgctgc atctaaattt ttaaagccgg aggtactgat ttcaggcgag
    21841 ataacattaa atttactgcc ggcttttgca attaacggat agtatttcct ttgaatgtaa
    21901 gcggtcgctt ttatctgttt ttttgcattt tgtagctcaa gtttttcaat ttgacctacg
    21961 gttaagccca tatatttaat gtccattcct tcgcttaact tactcgcatc ttttgcaatc
    22021 agcgtgagat aagtattgcc cgaagtggct ttctccttac ttgcataaag cgttttattg
    22081 ccttttgaac cgccatcatc aaagctgatc gcccctttta aggtacgcat taatggagct
    22141 gtagtgatat tcacgccttt gagtgacaca tcaacactcg ttgccggctc aatccagaaa
    22201 cggcttttct cggttaatag atgacgataa tttggctgga taaatagctc aacctcaaat
    22261 ttttgttgtt tcggggttat ttttaacacc tcgccgacct gaaaatcacg atatagcacc
    22321 aaagagcctt cgctgatacc agataatgaa tctgccgaaa gggtagtggt ggctttttta
    22381 tctaaggtag ccatgcctga ttccgcactt tctatatctt tataaagtgc atattgtttt
    22441 ttcgggctac cgtcattttt accgttaatt aagcgaacac cgccttttaa ccattcagat
    22501 ggtgaaccgg cgtgaactct taacccatct agccccaccg acatatcaat gttggatatc
    22561 gcaacaaatt tgctgttact cccaatcagg ttgcgataag gcggataaat aatgacatca
    22621 aaacgtactt tgtctaactc taggctacgt ttgacgattt ctccgatttg cacatcgcta
    22681 tagtaaatcc cctgattggt atctacccca taggcttgag gagcaattaa gctaaagcta
    22741 agtaaattcg gtaaacttaa tagataatcg gcttcgtttt gtaccacaaa ttccgattga
    22801 ggttctcctt cccccgggtg aacctcaaaa tagacaccac gcagcagctc acctactttc
    22861 gtcagctgct ctgtgtttaa ggagaatttc ggctctttga gcaagatttt agtttgggaa
    22921 cgtagtaaat tttcataact tgggtcaatt aataaaaccc catcaatctg tttatgctgc
    22981 cctgattctt gctgtggcac accgttgtct tttacttgcg gtaattttag ctgcgaaagc
    23041 ataccaattt gcacattttg gtgaaaaaca ccagtctcat taatttttaa attatgtgta
    23101 agcggtagtt ttacgttgat ttcaattcca cgtttagctg atttcaaatc cggatatagc
    23161 tcaaatttct gtccttgctc ggcaatttcc atattatcag gcgaatcaaa agcaaccgca
    23221 ccttgtacta ccgaggcaag gctgtccata ttgattttaa taccttgtaa atttacatca
    23281 gcgctaatac cgctaatatt ccaaaatcgg ctctcttttt ttactaaatg agcgtatttt
    23341 tgattaatga cgacatcaat ttcgattttt ttctggtctt tggtaaaacg ataatcggca
    23401 atattaccca ctggcacttt acggaaataa acactcgctc cgacagtaat agagcctatg
    23461 tcatcagaga ttaaacggat cagtaaatcg ccatcgctca cggtaatagc cggaggatct
    23521 tcttctgcaa taaattcatc aacgaaatcg ccttcaccgg gaagtagggt aatatagtta
    23581 ccagaaacaa tcgcatctaa gcctgaaacg ccagccaaag aagcacttgg ttgcactaac
    23641 caaaatttag tctgtttgcg taaaatactt ttggcttcag ggtttatttc tgcttgcact
    23701 tccacttctt ttaaattatc gacaaaataa acacgcttaa cctgaccaat ctgcaagcct
    23761 tggtaacgaa tagcggtttt tccggcagta atgccatcac ctttactaaa tcgaatcgtg
    23821 attgtttcac cttgctcttt taaaatttgg aaaaatagca aagcaccaat aataaaagca
    23881 actattggta acagccaaaa aggagaaatt ttgcgaggct gccggatttg ggcatctaca
    23941 acagtgtggg tattttcttc catcgtcatt ttaaattagg gaaacctata tagaacaata
    24001 ccgaagaccc aaagggactt cggtaataga aataagtcaa aataagaaat attatttttt
    24061 ctcatcacag ttggttaaat tactgcattt accatacaga tataaactgt ggttagtcaa
    24121 ttccattccg tgtttttcac tgatttcacg ttggcgacgc tccatatcag gatctttaaa
    24181 ttcgaacacc ttaccacaat ccatacaaat aatatggtcg tgttcgtggt tcatatttaa
    24241 ttcgaatact gctttattcg catcgaaatt atggcgggtt aaaatgccgg cttcttcaaa
    24301 ttggtttaag acacgataaa ccgttgctaa accaatgtct gagccttttt ctaacagaat
    24361 cttataaata tcttctgctg caaaatgttg catttcatca cgaatatctt gcattaatgc
    24421 aaggatagtc aaacgaggct cggttacttt taagcctacc tcttttaaac gtttaatatt
    24481 tgcttcagac atatatgcca cttatttatc tttatccaaa atagttatta tgcgagttgg
    24541 tctaagcaca tttcttcttt caactgctcg caccatttat taacacgttc agtggttaat
    24601 tcaggctgac gatcttcatc aatacataag ccgacaaaag tatcatcatc aactaaggcc
    24661 tgagaaacct cgaaagtgta accggcagtt ggccaatgac caacaatcac accaccattt
    24721 ggctctacca catcacgcac agtacccatt gcatcacaga aatattctgc ataatcttcc
    24781 tgatcaccgc aaccaaaaat tgcaacgact ttgccgttaa aatcaatctc ttttagggta
    24841 ggcataaaat cgtcccaatc ggcttgcgat tcaccataat accaagttgg gatcccaaac
    24901 atcagaaaat cgtatgcttc aatatcttct tttgtgcttt tggcaatgtc tcgaatatca
    24961 attaattcag cccctaattt tttctgaatc atttttgaaa tattttctgt attgcctgta
    25021 tcgctaccgt aaaataaacc tacaactgcc attgctacta cctatttgtg agataattat
    25081 ttagaattgt ttcaattaac tgcccgcgtg aaacaccttg ttcagacgcc tgttcctcta
    25141 ataactttac taaattcgaa tgcagtttta attctacccg ttttaaaccg gaagatttat
    25201 ctcgttttag ttggttacgt ttattgattc gaagttgttg ttctctatca agaggatttg
    25261 tacgaggacg cccaactttt ggtacagtcg caaacagatc taaggttata caatctgaat
    25321 cttgttttgc cattttgttt tactattggg ctttagctaa tcctcagttt taatgagaat
    25381 gataagctac ttttaaagtg tgaactatat caaaagttca atcatttgaa aagtaaatta
    25441 caggcaaaac aagcggtgtt tttaggttta aaatttgcaa aaaccataaa ttacacatta
    25501 tgagttatga tttttctgaa gcgtgaaatt agcttataat gaaaccgaat aacgttatga
    25561 aaaaggagat agtgtgtcga atatccattt agcgattgcc gctgatttta cgctggcaga
    25621 aaaattactt gaagcattag caaatcaaga tttagggatt gaaaatattt cagccgttga
    25681 gcttgagccg tttggtgaag agcagaattt acgctttggg gcaaaagcag tcgcacaata
    25741 tgcgttagat gaagtaaatt gggcggaatt tagccatgtt ctatttgccg gcaaaatggc
    25801 acaagcggaa gtgttggcag aagcggtgaa agccggctgt gtgattttag atttatacgg
    25861 cattaccgca ctcatcggcg atgtaccggt agttgtgcca agtgtaaatg atgaaaatgt
    25921 cgcaaatttg cgtgagcgaa atatcgttgc tttagccaat ccgcaaattt cacaactggc
    25981 gttagcctta aagccattgt tgaacgagcc gttaaaacag gtgtgggtaa cctcactttt
    26041 accgtctgcc tattttggcg atgaaaaagt caaggagctt gccggacaaa ctgcccgttt
    26101 gttaaacggc attccgtttg atgaaaatgc ggaacgcatt gcctttgatg ttgtgccggc
    26161 taatgtgcaa ggagaagaga aaagtctgcc gttctcaaaa gcctttgaac tgcaaattgc
    26221 aaaagtttta ccaaatttga ccgcttgtac taccttccac agcgtgcaag tgccggtctt
    26281 ttatggggtt tcccaaatgg tgtcggtgca gtctgaatat cagttagatg ctaatgcgtt
    26341 aagtgaagct tggaaagccg aaaattggct gaattttaat gaaaattcag tgattacagc
    26401 ggtgaaaaat ggcgaaaacg aagagcaaaa tgcgttagaa atcagtcagt tattggcgaa
    26461 atccgaacag gaagtgcagt tctggacggt cgccgatgaa cagcgtttca gtctggcatt
    26521 tttagcggtg aaattactaa aattagtttt agcgtattaa gtgcttgcaa aagtatttat
    26581 tccgtgataa aaatcgtcaa cgcccgagca accgattgct tgggcgttgt cattttgttt
    26641 aaacaccgaa ggtcttatgt tagaaaaatt atttcagctc aaagcaaaag gcagtaatgt
    26701 aaaaaccgaa attatcgccg gtattactac ctttttcaca atggtttata ttgttttcgt
    26761 caatccgtct attttaggcg tggcgggaat ggacacccaa gtagtgttcg tgactacttg
    26821 tttaattgcc gcttttggta ctatcgcaat ggggttattc agtaatttac cgattgctct
    26881 tgcaccggca atgggcttaa atgccttttt tgcattcgta gtggtgcaaa aattaggtta
    26941 ctcgtggcaa gtgggtatgg gggcgatttt cttaggctct gtcggcttat tcctattaac
    27001 tgtattacaa gttcgttact ggtttatgtc tgcgattcca cttggtttac gtgtaggtat
    27061 tggtgccggt atcggtttat tcattgccct aatcggtttt aaaaatatgg gcttggtggt
    27121 gccaaatccg gcaacgcttg tggcactagg tgatttgcac gacccgaaag tgttaatggg
    27181 gattttaggc tttttcatca ttgttgtatt agcggcgaaa ggtattcact caggcgtgtt
    27241 aatttcaatt gtgattgtta ccgctcttgc cttagccttt gacccggcgg tgagctttaa
    27301 cggcataatg tctatgccac caagccttgg ggcagttgtg gggcaggttg atattgccgg
    27361 tgcttttgat gttgccttac tcgggatgat tttctccttt atgttggtaa acctgtttga
    27421 ctcttccggc accttaattg cggtgactac caaagcaggc tttgcggatg aacaagggcg
    27481 tttcccgaaa atgaaacaag ctctgctagt agatagtacc gctgcaatgg caggctctta
    27541 tatgggaact tcagcgattt ctacctatat tgaaagtggc tccggcgttt cagttggcgg
    27601 tcgtaccggc ttaactgcgg tggtagttgg gatcttattc ctattaacca ttttcttctc
    27661 accacttgca gggttagtac ctgcctatgc aactgcgggg gcattggtat ttgtaggaat
    27721 tttaatggca tctagcttaa ttgaagtaaa atgggacgat ttaactgaag ctacgccggc
    27781 atttattact accgcaatga tgccgtttac ttactccatc actgaaggga ttgcattcgg
    27841 ctttatcagc tactgcgtaa tgaaagcctt tacagggcgt tggaaagaaa tcaacctttc
    27901 tgttttagtg gtttcacttc tctttattgc taaatttgtg tgggtgggtt aagctctacc
    27961 cccctctccc tgatttttct tctaaacgaa gaaaaatcta tccctctccc acaaagggga
    28021 gagggtattt gattcattat ctatgtgttt cgtgtattcc gaggtaaaac aatgtctaat
    28081 tcagttcaaa aacttctttt tatcatcaat tctgctcctt acggcaatga aacgtttttc
    28141 agtgcgttgc gtttggcatt acaaattcaa gaacaacata aagccaatac ggaaattaaa
    28201 cttttcttaa tgtcggatgc agtcaccgca gggctggcaa agcaaaatcc ggcagagggt
    28261 tatcatattc agcaaatgct ggaaatttta accgcccaag gggcaaacgt aaaattatgc
    28321 aaaacctgta ctaatgctcg agggattaca gatttgcctt tagccgatgg ggtagagatt
    28381 ggcacattaa ttgaactggc agattggaca attcaagcag ataaggtact gaatttttaa
    28441 tgcaaaatat tgatgttgtg gtgattggtg ccggtgcggc agggctgttt tgtgctgccc
    28501 aactggggca agctggcaaa aaagtggtgg tgttagacag cggtaagaaa gtcggacgta
    28561 aaattttaat gtctggcggt ggtttttgca attttacgaa tttagacgta agtgccggaa
    28621 attaccttag ccaaaaccgc cattttgtga aatccgccct ttcacgttat acccaatggg
    28681 attttatttc gcttgtcagc cactatggca ttagctatca cgaaaaagag ctagggcagt
    28741 tgttttgtga tgaaagctcg caacaaattg tcgatttact acaagcagaa tgcaacaaag
    28801 gcaaggttga gattctgtta cggcaagcgg tcatttctgt ggaaaaagtt gcaaattttt
    28861 ttgaaatttc gaccgcttgt ggcaagttcc aatccgaaca cttagtgatt gcaaccggag
    28921 ggctttcaat gccggctctc ggggcaagcc cttttggcta tcaacttgcc gagcagtttg
    28981 gtattcctgt tgtgccacca cgtgcaagcc ttgtgccttt tacttggaaa gagagcgata
    29041 aatattttgc cgagctttcc ggcattgcac tgccgattac tgtttccgcc aatggcaaaa
    29101 gttttagcaa tcagatgttg tttacgcaca gaggcttatc cggcccggca attttgcaga
    29161 tttccaatta ttgggaattg ggggaaacgg tagagattga tctgctacct tcgcagtcca
    29221 ttaccgatat attgagcgaa ctacgccaat cttcgccgaa attacagcta aaaaccgtat
    29281 tatctcgtta tttacctaaa aaattggttg aagtttggct ggaacagaaa ttgctgaccg
    29341 ataaagtgat tgccgatttg agtaaaaaag atctgacctt attagagcaa tttatccacc
    29401 attggcattt cttgccaaac ggcacggaag gctatcgtac agcggaagta accaaaggcg
    29461 gtgttgatac cgactatatt tcatctaaaa cgatggaagc gaaaaataca gcagggcttt
    29521 attttatcgg cgaagtgctg gatgttaccg gctggcttgg tggttataat ttccaatggg
    29581 cgtggtcatc tgcttttgcc tgtgcagaag ggattattga aaaaagcaaa taactaaaaa
    29641 agcaaataac taaaaaacca aacaaaaagg cgaacacaat tgttcgcctt attttatgct
    29701 gaattatctt gcacggaaaa taatgcgtgc tttgcttaaa tcgtatggag tcatttcaac
    29761 cgttacttta tcaccggtta aaatacgaat gtagttttta cgcattttgc ctgaaatatg
    29821 tgcggtaaca atatgaccgt tttctaattc cacacggaac attgtatttg gtaaggtttc
    29881 taaaatcgta ccttgcatct caatgcaatc ttctttagcc atttattcct ctttaaagtt
    29941 ttaattttta tatgatgcca ttcggcgaaa aacggcggat attatacgct tattcgctca
    30001 aattacaatc gtttatccat ttgagtgtaa actatttacg cttaatccaa cggcgacgtg
    30061 agtgaaaacg ctgggtttgg gtttttactt gactcataag tggttttggg cttatctgta
    30121 catgatgaat tttacgacga aaatagtagt taatgctact tgccaacaat atacctgtga
    30181 gtagcaaaat aattatttcc ccataaagtt gatgaaattg ttgctctact cgtgctttag
    30241 tagtttgccc atattctgca tcaaacgtga cgcgtaaaaa gccaaccaac gcctgttgag
    30301 aaaatattgg ctcaacaatt tgctgagttt tggcagattg ctctgaatcg agcaatactt
    30361 ttaaatcttt cgcattttgg ctttgagcca gtagcacgcc atttggtgaa tagatattgg
    30421 catcaataat aaaatcttct ttggcaaaac tatccaacgc atcaaccagc tcatcggttt
    30481 tggcattttt aactaacaaa aacgaaaaaa tatttgcttg ctggcgaacc aataggtgtg
    30541 aaaggtttga tacttgatta atgctggcca attgtgagcc tagcttaaat tggtttacgc
    30601 ccattaaaat aaccgccacg atcccacagc agagtagcgt aatccctgcc agcaaaagcg
    30661 ttttcgttat tttttcacga ctaatgtaca tcgaaattcc ctcaaaatga tgcgtgattg
    30721 tagcacgctt ttctgttaga ttagtgcagt aaatttaaac aacctaaaat aagacaatga
    30781 caaacacaat ttttatctat tcaaaaacct taaacgagcg tgaaattgaa cagttttcac
    30841 aacaaacggc agcaattttg ctgaaacaag cggtctattt agactacaaa attgcatttt
    30901 tttccacaaa tttaaccgct tgcgagctgc gtgaaacggc acagaaaatc aatgcggata
    30961 ttagcgatct cactattatt ccaaccttaa accaaggcgg tttgctatta atggatatgg
    31021 attccaccgc tattaaaatt gaatgtattg atgatattgc caaacttgcc ggcaccggcg
    31081 aggtggtgtc cgccattact gccagtgcaa tgcggggcga gctggatttc gagcaaagtt
    31141 tacgcaagcg agtcggcacg ttggaaaatg catcggaaag cattttgcaa aaagtgcggg
    31201 aaaatctacc gcttatggac ggctttgagc agatggttgc tattcttaag gaacacggct
    31261 ggaaattagc gattgcgtcc ggtggatttg attacttcgc cgattactta aaacaaaaat
    31321 acgggttgaa ttttgcggtc tctaaccaac tggaaattat tgacggtaaa ttaaccggca
    31381 aggtgttagg caaagtagtg gatgctcaac ataaagccga taccttacag aatttagcga
    31441 caacctttaa tattccacca aatcaatggg tggcagtcgg cgatggggca aatgacttac
    31501 caatgttaaa aaccgccagt ttaggcgttg ctttgcacgc taaaccaaaa gtgcaagcac
    31561 aagctgattt tgtggtaaac ttcggggact taacggcatt atgtttatta cttaatgcca
    31621 atcatttatt tcaacattaa ttgagaggaa caacaatgcc atcatttgat attgtatctg
    31681 aaatcacgat gcacgaagtg cgtaatgcgg tagaaaatgc caatcgtgta ttaagcaccc
    31741 gctacgattt ccgtggggtg gaagccgtta ttgagttaaa tgaaaaaaat gaaagcatta
    31801 agctcacgac cgaatcggat ttccaattag agcagttaat tgagatttta atcggctctt
    31861 gtgtaaaacg tgggatcgag catagttcat tagatatccc tacagaaagt gagcatcacg
    31921 gtaaactcta ttccaaagaa attaagctca agcaagggat tgagtcagat atggcgaaga
    31981 aaattaccaa gctgattaag gattctaaaa tcaaggttca agcccaaatt caaggcgagc
    32041 aagtgcgtgt aacgggcaaa tctcgtgatg atttacaagc cgcaattcag ctagtgaaag
    32101 gggcagattt agggcagcca ttccaattta ataatttccg tgattagcaa ttcctgcaat
    32161 taatgatgac aagtggaaaa attcagcaaa atttgaccgc ttgcattaat aattcaacat
    32221 aaaaggaaga gatgatgagc gagcaaacag aaaagaaagg ctggtttaaa aaagcccttg
    32281 agaaatatga tgccttttgc gatgagctag gggtaaatca aggtgcttgc cgaggttgtg
    32341 tccctgtggt gaagtttgac cctgaaccgg aaaaagagca gccagaaaaa tcagaaaata
    32401 aaacatagaa aaaatgcaca atggtaagat acattgtgca ttttttatag gatttttaat
    32461 tggcgtgatg atgggcaaaa tattgcttaa ctccgccatc tttcttgcaa ggattctgaa
    32521 tatcagtaga gtaactaccg ttaaaacaaa gagcagtagc attcgatggt ttaatctttt
    32581 cctgtttagt tagggctggc ggttgagtat tggtttcact aatatagatc gttttaggtt
    32641 gagaatagtc tatatttttg tcgccattta cgacttgaac gggggtgttc gagctgcaag
    32701 ctacaaccga tgctgaagcc aatgtaagta taatgatatg gtgttttttc atgggtaatt
    32761 tccgttttta tatttttaat tgagagaatg ttaaaaaggg ctgatttctc aacccttaaa
    32821 gttatgcctt aagcattttt attaaaagtt tgtcctaact gaatttcatc atttaataca
    32881 ggaattaact gctctagttg atctttttca aattcgctga gattgccgat aggtagaact
    32941 ttttccacac catttgtacc taaacgaatc gggtaagcaa agaatgccgg agaggtttcg
    33001 ccattggcat tatctacata agcataacga atgacatctt ccccgattaa ggctctcact
    33061 aaaccaagtg caaattctgc tcctgcttga gccatagata aggttgctga gccaccacct
    33121 gcttttgcct caaccacttc agtaccggcg ttttggatac gatgagttaa ttgctcgatt
    33181 tgttcttgag tgaactcaag ttttaagcca tttactgttg cttgtgaaag cagtggaaga
    33241 atagttgtgc cggaatgtcc gccaatcaca ggcactctta catatttcac atttacgtct
    33301 ttcgcttcag ccacaaaggt attcgctcga ataacatcta atgttgtaac accgaaaagt
    33361 ttatttttgt catacacacc ggcttttttc aatacttctg ccgcaatcgg aataatggtg
    33421 tttaccgggt tagtaataat tgcaatgcaa gctttagggc aaactttcgc tgctttttcg
    33481 actaagttat gcacgatagt ggcattcgta ttgaataaat cggcacgtgt catccccggc
    33541 ttacgggcaa caccagcaga aataacgacc acatcggcat cttttagtgc ctcagtcgga
    33601 tcttcacctg caaaaccggt tacttttaca tcagttggaa tatggcttaa atccactgca
    33661 attcctggag taacagggga aatatcgtaa agagataatt cagatttagc cggtaaattg
    33721 agttttaata ataaggcgag tgattgaccg attccacctg cagcacctaa aagggcaact
    33781 tttttacttt gacacataaa atttctccta aatgttatgg aagtttagac caatttagtc
    33841 taagccaatt ttttgggcga ttcaaacggc aaatctcatt tttgagacat agagcaaatt
    33901 tttagctgat ttttatgggt tttattgatt tatttgcata aataagcaag aattatgaat
    33961 atttttaagt ttttgtgaat aagagtgtga aagtggacaa gatagatagt ttatcagaag
    34021 cgtttaaatc gctgttaaag gaagaaaaat tcggctcgca aagtgaaatt gttgccgcac
    34081 tacaagagat gggctttgat aatatcaacc aatccaaagt ttctcgaatg ttatcaaaat
    34141 ttggtgcagt cagaacccgt aatcctaaaa tggaaatggt gtatcagcta ccagtcgaat
    34201 taagtgtacc gactacctcc agcccactta aaaatttggt ggtagatatt gatcataatg
    34261 atgcgttaat tgtggtcaaa accagccccg gtgcggctca actgattgca cgtttgctcg
    34321 attcaatggg taaagccgaa ggtattttag gcactattgc tggcgatgat acgattttta
    34381 taacgccggt acgcaatgtg caaattgaaa aattggtgaa gaatgtgaca cagttatttg
    34441 aaacatcatt atagaataag taaaggagga cttaatgttc tccttatttt ttaggagatt
    34501 attatgcaca tttttataac aggtggtacg ggttttattg ggcgtgaatt aatccagcaa
    34561 ttaaaatctg aaaatcacca ctttacactt cttactagag atacagaagc gaaaagtgat
    34621 gatttacaga ttaattattg ctattcactt gatgaacttg ttgatttaaa tgattttgat
    34681 gcagtaatta accttgccgg tgagccgatt tttgataaac gttggacaga cgaacaaaaa
    34741 cagaaattga ttgaaagccg ggttaaccta acgaataagc tcagtcaatt aatgaatgca
    34801 agctctaacc ctccgcatac ttttctctcc ggttcggcaa tcgggattta tggcgatttg
    34861 cctccttctg caaattttta tacagaatcg accgcttgtt atcaagattg ctttaccaac
    34921 cggctttgcc aacagtggga agccgctgca ctaaaagccg caagtgataa aacccgagtg
    34981 tgtttaattc gtaccggcac ggtattttcg cccgaaggcg gagcattaaa gaaaatttta
    35041 ccgctttatc gatgcggatt aggcggaaaa cttggttcag gcaaacaata ttgggcgtgg
    35101 atcagccgcc gggatcacgt acaagcggtc atttttctgc tcaaaaatgc aaattgttcg
    35161 ggtgcttata attttgttgc accaaatccg gtgagaaatg aagaatttaa tcgtatttta
    35221 gcgaatgctg ttaatcgccc ggcattcttt actgtgcctg aatttgcctt gaaattaggc
    35281 ttaggcgaac gagcttgttt agtcttagat aatcaacagc tcattccgga aaaactactc
    35341 gcagccagtt ttgtattcca agatccgatt ttaaccgaga acgttttctt aaacccataa
    35401 tttaggctat aatgctgtat aaaagcacag attaaaaggt gattatggat ttctcattat
    35461 tattagacgg tttaaatgac aagcagaggg aggcggttgc tgccccgatt ggtaattatt
    35521 tagtgttagc cggggcgggt tcgggcaaaa ctcgggtttt aacccatcgc attgcgtggc
    35581 tgattggggt ggaaaatgtg ccggaatcca atattctggc tgttaccttt accaataaag
    35641 cggcggcgga aatgcgacat cggattgagt acactctttc ccaatcgggc gataatcgat
    35701 tgttcggaat gtgggttggt actttccaca gcattgccaa ccgcttactt cgttcccact
    35761 atttagatgc ggatttaccg caagatttcc aaattatgga taccgaagat cagcaacgtt
    35821 tactcaaacg tttactgaaa ctgcataata ttgatgagaa acattttccg ccaaaacacg
    35881 ttgcgtggta tatcaacgcc caaaaagata aaggcaaacg ggcaaaagat attgatcact
    35941 ataacgatcc gaatgaaaaa aaattggtgg agatttacca aatctatcaa gatgcctgcg
    36001 accgagccgg tttgttagat tttgccgagc tgttgattcg ggcttatgaa ctattcaaaa
    36061 ccaaatcaac cattttgcaa cgttatcaac aacgttttca gcaaattttg attgatgagt
    36121 ttcaagacac caacaatatt cagtacgact taattcgttt gcttgccggc gatgtcggca
    36181 aagtgatgat tgtcggcgat gatgatcagt ctatttatgg ttggcgtggg gcacaggttg
    36241 agaatatcca acgtttctta aatgattatg acaacgctca aaccattcgc ttagagcaaa
    36301 attaccgctc taccggcaac attttaagct gtgccaatga attaattgcc aataacgata
    36361 accgcttagg caaaaattta tggacagata gcggtgatgg cgagcctgtg gatatttact
    36421 gtgccttcaa cgaacttgat gaagctcgct ttgttgcctc gcaaatcaag caatggaaag
    36481 aagacgaggg tgatttggcg gaatgtgcgg tgttgtatcg cagcaacagc caatctcgtg
    36541 tgattgagga agctttaatt caagcgaata ttccttatcg catttacggt ggaatgcgat
    36601 tctttgaacg ccaagaaatt aaagatgctc tggcttattt acgcttaatc gccaatcgtc
    36661 aagacgatgc ggcgtttgaa cgggtgatca acacgccaac cagaggcatt ggcgatcgta
    36721 ccttagacac actccgtcaa attacccgtg gtcgccaaat tacgctgtgg caagcaattc
    36781 aagtggcggt gcaagaagaa caactttcag ggcgtgccac ttcttcctta ttgcgttttg
    36841 tagagctgat taatgctctt gatcaagaaa ccgagcagat gtcgcttgcc gaacaaaccg
    36901 attttgtgat taaaaaatcg ggtttatatg aaatgtataa gcaagaaaaa ggcgaaaagg
    36961 gcgaagttcg gattgaaaac ttagaagagt tagttaccgc aactaagcag tttgtgaaac
    37021 ctgacgaagc ggaagagctg accgatctta ccgcattttt aacccacgcc tcacttgagg
    37081 ctggagaagc ccaagcctcg caacacgaag attatgtcga actgatgacg ctacattccg
    37141 ccaaaggatt ggagtttccc cgtgtgttta ttgtgggcgt ggaagaaggg attttcccaa
    37201 gcggaatgag ctttgatgaa ggcaggttgc aagaagaacg ccgtttggct tatgtcggca
    37261 taacccgagc taagaaaaaa ctgacgatta gctatgccga atcaagacgg ctttatggta
    37321 aagaagaacg ccacgttccg tctcgcttta ttgctgaatt acctgaagag catattcgag
    37381 aagtgagatt gagaggctca attaaccgag cggcaagttt taaccaagct aattcatttg
    37441 caaaaaatcc gacaaaaacg accgcttcct ttttaaacga tgatacttgg aaaatggggc
    37501 agaaagtgaa ccacgctaaa tttggacaag gcacgattat taatgtggag ggctcaggtg
    37561 aagccacccg tttgcaagtt gcctttgtcg gcaacggcat taaatggctg attgccaaaa
    37621 tggcaaattt agagaggatt taggcgaata aaaagttttt tgcaggaata tagatggcga
    37681 gatatattgc cccttaacct taaactaagg gtaaataaaa ttaaataatg caagctagat
    37741 ataatgtaaa gtatcagaaa taagatatta atttaagata aagaatag
//
LOCUS       DANMCL010000012        36151 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.012, whole genome shotgun sequence.
ACCESSION   DANMCL010000012 DANMCL010000000
VERSION     DANMCL010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 36151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36151
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.012"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            1..363
                     /locus_tag="PXF40_000572"
     CDS             1..363
                     /locus_tag="PXF40_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HDL5801947.1"
                     /translation="MKPTNKADFQRVINAAGYSMKGLKAAYINEAAFRQEIWCATILF
                     PLGLILGETNIEKALLVGTVLLVLVTELLNSAVESVVDRIGADFHELSGRAKDIGSAA
                     VFMAMVLLAITWILILFC"
     gene            400..2043
                     /locus_tag="PXF40_000573"
     CDS             400..2043
                     /locus_tag="PXF40_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HDL5801948.1"
                     /translation="MRLKKTLLSVALLSATSAMAYETGKTYRFTVLHTNDIHGHFWQS
                     DKGEYGLAAQKTLVDNIRKEVAEKGGSVLMLNAGDANTGVPESDMQNARPDIEGMNAI
                     GYDAMVLGNHEFDYPLQILSMQEKWAKFPFISANVINKKTDKPIVKPYVMLERGGLKI
                     AVIGLTTEDTAKLGNPDVTENAFFKNPIETAKNTLAEINQKEKPDVRIALTHMGYYFD
                     GKHGTNAPGDVTMARTLEKGAFDLIIGGHTHDTVCIDEKGQFKAKYTPGEECKPDFQN
                     GTWIVQAGEWGKFVGRADFEFKDGKATLVKYELIPVNLKKTIKKEDGTKEYRLYQPEI
                     KADEATYTLLKKYQDEGDKKLNIEVGRVKGLLDGKREHIRFQQTNLGRLIAQSQMERV
                     KADIGIMNSGGIRTSLEEGVITYKHILTVQPFGNMIATVDLKGQELLDTLTTIALKEV
                     DTGAYPQFAGISMVVDRTAKTISDVKIGGKPFDKEKTYKVSLPDYVAAGGDGYPLLKK
                     HPSYVNTGFIDAEMLKKFFEENKIIEADKYDPKNQIIFK"
     gene            complement(2250..3119)
                     /locus_tag="PXF40_000574"
     CDS             complement(2250..3119)
                     /locus_tag="PXF40_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5801949.1"
                     /translation="MSSRGKILNTISSLQNSLTKTEKKIAAAILSQPELLSQCSLSEV
                     AKQLDVGEATFIRFCRTLGFKGYTDFKLELAIELATQNQDNRVLLDTDVSESDTSKDI
                     AEKLKVSLDNVIEETINLLDFNVLEKVVEELRKAKRIFLFGVGSSGLTAEDAKHKLMR
                     IGLQTDAVTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITH
                     NLRSPVTEEANYVLINGNRQGHMQGDSIGTKMSQLFVLDLIYTLLVKAEPENALKQKQ
                     KTLNVILEQRVKG"
     gene            complement(3129..3593)
                     /locus_tag="PXF40_000575"
     CDS             complement(3129..3593)
                     /locus_tag="PXF40_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5801950.1"
                     /translation="MILADLSRDDYLKSLPPVFARLCKKLKSLDLVNLELGWQELENG
                     IRMNVMSFETTPAEGKKAELHRKFIDIQLLIDGEEMIEYGLSQPDLSKYDEYRDEDDY
                     QLTAEIDDKNNLILKPNMFAIFLPYEPHKPGNSVNGNKTLKKLVVKVPVELI"
     gene            complement(3840..5342)
                     /gene="ppx"
                     /locus_tag="PXF40_000576"
     CDS             complement(3840..5342)
                     /gene="ppx"
                     /locus_tag="PXF40_000576"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HDL5801951.1"
                     /translation="MSSNIAPREFAAIDLGSNSFHMIVARIVNGSIQVLSRLKRRVRL
                     ADGLDENLVLSQDAIDRGIACLALFAKRLEGFSAENVKVVGTYTLRRAINNQAFLEQA
                     KAVFPYPISIISGQQEARLIYSGVSHTQPETGRKLVVDIGGGSTEMTIGDDFTPIRAE
                     SRHMGCVSFAKRFFPQGELTIERFDSAYQLAMEKIEDLMWEYKELGWDYALGSSGTIK
                     TVHQVLIANGYRDGLITESRLQKIIDICLEFKSLNEIKLRGLLDERADVLVPGLAILL
                     ALFHTFRIDVLRYSNGALREGVMYGLEKSFQVGDIRQRTAEALAEQFALDKQQAKRVE
                     HTALILFDQIKTWKNRRQVQDLRSMLKWASLLHEIGIVVNHNNVHRHSAYLIANRDLP
                     GFDFEQQTLLSVLMRYHLKGFKRSDIRSINRYQCRDVLTLVRVFRLAVLLNRSRQATV
                     VPKQLNLVIENNAWQLTFEQGFLANNPLISIDLEEEQKILASTNLQFAVS"
     gene            5538..5867
                     /locus_tag="PXF40_000577"
     CDS             5538..5867
                     /locus_tag="PXF40_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HDL5801952.1"
                     /translation="MSEVNKSFHDMLEYVHLYRLKNKLHRETADNDRKIRDNQKRVLL
                     LDNLTQYITDEMSIEEVRAIISNMRDDYENRVDDYMIRNAELSKQRREIRQKMASHKQ
                     APTNKKA"
     gene            complement(5931..7361)
                     /locus_tag="PXF40_000578"
     CDS             complement(5931..7361)
                     /locus_tag="PXF40_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIBC"
                     /protein_id="HDL5801953.1"
                     /translation="MSTLTYLQKIGRALMVPVAALPAAALLMGIGYWIDPDGWGTNSQ
                     LAALLIKSGAAIIDNMSILFAVGVAFGMSKEKDGAAALSGLVGYLVITTLLSPGTVAQ
                     LKGIAVDQVPAAFGKINNQFIGILVGVISAEIYNRFYQVELPKALSFFSGKRLVPIVV
                     SFILLYVWPVIFGALVSFGESIKDMGALGAGIYAFFNRLLIPVGLHHALNSVFWFDVA
                     GINDIPNFLGGAKSLAEGKAVIGVTGMYQAGFFPMMMFGLPAAALAIYHSAKPAKKMQ
                     VASIMFAAALASFFTGITEPLEFAFMFVAPVLYVVHALLTGLSVYIAASMEWIAGFGF
                     SAGLVDLVLSTRNPLAVQWYMLLAQGIVFAVIYYVLFRVVIQAFNLKTPGREEDSEVQ
                     TVNTVSRSEQAAKFVEALGGKENITSIDACITRLRLTLNDTAKADETKLKALGSKGNI
                     KLGENGYQVILGPEAEFVADAMKKLN"
     gene            7924..9276
                     /gene="lysC"
                     /locus_tag="PXF40_000579"
     CDS             7924..9276
                     /gene="lysC"
                     /locus_tag="PXF40_000579"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HDL5801954.1"
                     /translation="MSHLSVAKFGGTSVANFDAMTSSANIVIADANTRVVVLSASAGV
                     TNYLVELANGCEKEHRDEVIAAVRQIQYNIIEKLQHQDAVKAEIDELLERIETLAESA
                     SLATSAALSDELISHGEMMSTKIFTQLLIERGHPAVWVDVRDVVATNSHYGKAAPNDE
                     KTQQQSDNVIKPLIASGKIVITQGFIGRDDEGKTTTLGRGGSDYSAALLAEVLNANDV
                     LIWTDVPGIYTTDPRVVPNAQRIDTMAFNEAAEMATFGAKVLHPATLLPAVRSNIPVY
                     VGSSKAPEQGGTWVTRDPQPRPTFRAIALRRNQILLTLSSLSMLHAQGFLANVFAILA
                     KHKISVDVITTSEVSVALTLDKTGSASSGADMLSAELLDELNAYCNVQVESDLALVAI
                     IGNNLHAQSGVAKKLFHTLENYNIRLISYGASSNNVCTLVKNAEADDVVRSLHKGLFE
                     "
     gene            complement(9347..11593)
                     /gene="parC"
                     /locus_tag="PXF40_000580"
     CDS             complement(9347..11593)
                     /gene="parC"
                     /locus_tag="PXF40_000580"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HDL5801955.1"
                     /translation="MTTEINYEGIEQMPIKRFTEDAYLNYSMYVIMDRALPFIGDGLK
                     PVQRRIIYAMSELGLNASAKYKKSARTVGDVLGKFHPHGDSACYKAMVLMAQPFSYRY
                     PLVDGQGNWGAPDDPKSFAAMRYTESKLSKIAEILLGELGQGTVDYQPNFDGSLEEPK
                     YLPARLPHILLNGTMGIAVGMATDIPPHNINELADASVMLLDNPKATLDDVLSVVQGP
                     DYPTEAEIITPKAEIARMYEQGRGSIKMRAVWKKEEGEIVISALPHQASPSKIIEQVA
                     TQMRNKKLPMVDDIRDESDHENPIRIVIVPRSNRIDFDALMDHLFATTDLEKSYRVNM
                     NMIGLDGKPAVKNLLTILNEWLSFRRTTVTRRLNYRLDKILNRLHILDGLMIAFLNID
                     EVIEIIRNEDEPKAELMARFNLTDVQAEAILNLRLRHLAKLEEHQLQAEKSELEKERD
                     ELQLILGSERRLNSLIKKEIQADAKAFASPRRSPLVERAESKAIAESDLTPTEDVTVI
                     LSEKGWVRCAKGHDIDVQALSHRAGDGYLAHARGRSNQPVVFLDSTGRAYALDPTSLP
                     SARSQGEPLTGKITLPEGAVVQQVLMASPETKVLMASDSGYGFICTFADLVSRNKAGK
                     AVISLTENAKVLPPQLLENDENLSLVAMSNVGRMLVFPVSELPQLSKGKGNKIINISA
                     AAAKSGDEYLARLLVIKPTNSLVFVSGKRKITLKPSDVDNYRGERARKGSQLVRGLST
                     NSTVEIVE"
     gene            11778..12815
                     /gene="pstS"
                     /locus_tag="PXF40_000581"
     CDS             11778..12815
                     /gene="pstS"
                     /locus_tag="PXF40_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005756281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HDL5801956.1"
                     /translation="MAKRFKLLTVLGISFSLSVAANAQTITGAGASFPYPIYAKWAGL
                     YEKETGNKINYQSIGSGGGQQQIIAKTIDFGASDDPMKGETLAEHKLLQFPAIIGGTV
                     PVVNIPELKSGELKLSGKVLADIFLGKITQWNDPAIVALNQDIALPAKTILVVRRSDG
                     SGTTFGWTNYLSKVSAEWKEKVGEGKSVKWPVGQGGKGNEGVAAYVKQLKYSIGYVEY
                     AYAKQNALAWVSMQNADGKFVQPSRETFAAAAANADWSQTAGMGVILTNEAGEKAWPI
                     TAASFILIHQHSDKPEQTKGVFKFFDWAFKHGKDAAAELDYVPLPDNVVEKIQTQWKT
                     EVKDGQGNSLY"
     gene            12896..13855
                     /gene="pstC"
                     /locus_tag="PXF40_000582"
     CDS             12896..13855
                     /gene="pstC"
                     /locus_tag="PXF40_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HDL5801957.1"
                     /translation="MHKHKIDNKCLNHPWVEGLFHHTTRFFALLVFALLVVVLVSLLL
                     GSWEALSRFGVSFLWENEWNPVNDRYGALVPIIGTLISAGIALVIAVPVSFGIATFLT
                     ELAPQWLKRPVGTAVEMLAAIPSIIYGMWGLFVFVPLFQEYVQPYLIDTFGQLPFIGM
                     LFSGAPFGIGLFSAGLVLAIMIIPFIASIMRDVFSVVPPLLKESAYGLGSTTWEVIWK
                     VVLPYTKTGVIGAIMLGLGRALGETMAVTFVIGNAFMLPDSVFSPSTSIASAIANEFN
                     EAGGLQKSALMSLGLILFLITSIVLAASRLLIARMGKQEGKRE"
     gene            13852..14700
                     /gene="pstA"
                     /locus_tag="PXF40_000583"
     CDS             13852..14700
                     /gene="pstA"
                     /locus_tag="PXF40_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005650601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HDL5801958.1"
                     /translation="MKNYQNRRFYCRKIKNVLMLSLAYSAVLFGLFWLVWIIVTLLQK
                     GIPALSWELFTRPTPAPNETGGLRNAIVGSILIVSTATLIATPIGILAGTYLSEYGRY
                     TKLAKFTRFLNDVLLSAPSIIIGLFIYAIYVAQVKHYSGWAGSLALAVLVIPIVVRTT
                     DSMLNLVPNNLREAAAALGCPRWRVITMISYRAARSGIITGVLLAVARISGETAPLLF
                     TALSNQFASLDMNAPMANLPVVIYQYAASPFADWNTLAWAGAMLITLFVLSLNIITRL
                     YFSKTK"
     gene            14710..15480
                     /gene="pstB"
                     /locus_tag="PXF40_000584"
     CDS             14710..15480
                     /gene="pstB"
                     /locus_tag="PXF40_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HDL5801959.1"
                     /translation="MLPTDLETKLHINNLNFYYGDFHALKNINMRIAKNKVTAFIGPS
                     GCGKSTLLRTLNRMFELYPNQRATGEINLDGENLLTSDTDISIIRAKVGMVFQKPTPF
                     PMSIYDNVAFGIRLFEKLPKSELNDRVEWALTKAALWNEVKHKLNQNGDSLSGGQQQR
                     LCIARGIAVKPEVLLLDEPCSALDPISTMKIEELINELKHDYTVAIVTHNMQQAARCS
                     DYTAYMYLGELIEFGDTKQIFDKPKFRQTEDYIKGKMG"
     gene            15564..16250
                     /gene="phoB"
                     /locus_tag="PXF40_000585"
     CDS             15564..16250
                     /gene="phoB"
                     /locus_tag="PXF40_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HDL5801960.1"
                     /translation="MNNKILIVEDERAIREMLSLYLSKQYQVIEAEDYQSAINKLGEK
                     PELILLDWMMPGRSGIHLIKYLKKQPETEKIPIIMLTARSSEEDCITGLNAGADDYIT
                     KPFSPQVLLARIEAVWRRSYDPPSNLINIDGLILDQQAQRVLVAEQEVKLSGTEYKLL
                     HFLMTHPEKVYRREQLLDFIWGNDIYVEDRTVDSYIRRLRKSLEPYGFERYIQTVRGS
                     GYRFSNHFQD"
     gene            16253..17533
                     /gene="phoR"
                     /locus_tag="PXF40_000586"
     CDS             16253..17533
                     /gene="phoR"
                     /locus_tag="PXF40_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HDL5801961.1"
                     /translation="MKVKLSLKHFLLELLLAAAVAGVFNLFFPAYFFWFSFCLLVLLI
                     WHHHTESSLLQLLRPNEQSGRSKVTTMEHLSQSAAFYHERLRQDKIKTLRLLSKLNKH
                     IQYLPDAIIICQENGEISWCNNVAQELFEFYWDKKSNKSIFNVIFYPEFKSYFRQQRH
                     HRPLVLLTHNKRYIELNLNRYDSNSRLIVARDVTSFVRLMHSRQTFLANMNHELRTPL
                     TILQGYLEMLENEPHNMALQQKALNAMKEQSQRMTNLLRQLSLLVKIEHSNDSEHNEV
                     QMSALISAIQKNTEILSQNQQILFDIEPNLTVWGDQEQLQSAVSNLIYNAIRHAGEGV
                     TIQICCQRDNQEPNTAIFSVQDDGIGIDAHHITHLTERFYRVDESRSNKTGGSGLGLA
                     IVKHALEQHHSTLEIESEAGKGSRFSFKLPLIKK"
     gene            17795..19945
                     /gene="pnp"
                     /locus_tag="PXF40_000587"
     CDS             17795..19945
                     /gene="pnp"
                     /locus_tag="PXF40_000587"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HDL5801962.1"
                     /translation="MTPIVKQFKYGQHTVTLETGAIARQATAAVMASMDDTTVFVTVV
                     AKKDVKEGQDFFPLTVDYQERTYAAGRIPGGFFKREGRPSEGETLIARLIDRPVRPLF
                     PEGFFNEIQVIATVVSVNPQISPDLVAMIGASAALSLSGVPFNGPIGAARVGFINDQF
                     VLNPTTSEQKISRLDLVVSGTDKAVLMVESEADILTEEQMLAAVVFGHEQQQVVIENI
                     KEFVKEAGKPRWDWVAPEPNTDLINKVKALAETRLGDAYRIVEKQVRYEQIDAIKAEV
                     IAQLTAEDETVSEGTIIDIITALESQIVRSRIIAGEPRIDGRTVDTVRALDICTSVLP
                     RTHGSALFTRGETQALAVATLGTERDAQIIDELTGEKSDRFLFHYNFPPYSVGETGRI
                     GSPKRREIGHGRLAKRGVLAVMPTAEEFPYVVRVVSEITESNGSSSMASVCGASLALM
                     DAGVPIKAAVAGIAMGLVKEDEKFVVLSDILGDEDHLGDMDFKVAGTRTGVTALQMDI
                     KIEGITPEIMRIALNQAKGARMHILGVMEQAIPAPRADISDYAPRIHTMKIDPKKIKD
                     VIGKGGATIRALTEETNTSIDIDDDGTVKIAATDGNAAKAVMARIEEIVAEVEVNQIY
                     NGKVTRVVDFGAFVSILGGKEGLVHISQITNERVERVADYLTVGQEVQVKVVEIDRQG
                     RIRLTMKDINNTNEANAEETVAENVVETEQENNF"
     gene            20026..20949
                     /gene="nlpI"
                     /locus_tag="PXF40_000588"
     CDS             20026..20949
                     /gene="nlpI"
                     /locus_tag="PXF40_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HDL5801963.1"
                     /translation="MVQLFKLFRIRFLLLNLISVLMLSGCTSRYADLVSIKNLALAEL
                     NPQLRFEQEAMVVRLSQVLEEAPLTPSEQADLYFERGVIYDSLGLWSLARYDFAQAIS
                     LNQRMAAAYNYMGLYLLLEGDYDSSIDAFNAVLELDREYSYTYLNRGLAFYYSGRYSE
                     AQRDLLHFYEEDKKDPYRALWLYFNELEFTPTEAKNNLQKRANNLSSDYWGTNIVNYF
                     LGKLNLAQVRAIMERDAKENSSQYAEILTETYFYLAKQQLKLDHKDEAISLFRLALAN
                     QVFNFVEYRFALFELSQIRGMTQTTPVVDKE"
     gene            21151..22959
                     /locus_tag="PXF40_000589"
     CDS             21151..22959
                     /locus_tag="PXF40_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HDL5801964.1"
                     /translation="MTTESLTFADLGLPQPILDAVNEMGFVNPSPIQQECIPHLLAGR
                     DVLGMAQTGSGKTAAFSLPLLAQIDPTQRHPQMLVMAPTRELAIQVADACEQFAKNMK
                     GIRVVTVYGGQRYDIQLRALKQGSQVVVGTPGRILDHIRRGTLDLSELKFIVLDEADE
                     MLRMGFIDDVETVMAELPETHQTALFSATMPEPIRRITRRFMKDPQEVKIKATERSAP
                     DIEQSYWLVNGFRKNDALLRFLEVEEFDAAIIFTRTKTGTIDITELCERNGYRTAALN
                     GDMTQQAREQTLDKLRSGRLDILVATDVAARGIDIERISLVINYDIPLEEESYVHRIG
                     RTGRAGRSGRALLFVEPRERRLLRNIENLIKKPINEVAIPNHEILMEKRREKFKARIS
                     KQLEHHDLEKYRELLEDLFTADQDHEELAAAMMMLLQEKQKLILPPDPVVRAARSERG
                     RDRNERNDRRNGREHRENNGVAMDLYRIELGREDGVEVRHIVGAIANEGDISSRYIGH
                     IKLYDKYSTIELPQGMPNHLVQHFAHKARVLSKPMQMTLLGSANSASNANPFEGRGRR
                     GNDRNDRGGRRDGGFNKDRKGGFKEKRFSEKRGRRD"
     gene            23041..23565
                     /gene="tadA"
                     /locus_tag="PXF40_000590"
     CDS             23041..23565
                     /gene="tadA"
                     /locus_tag="PXF40_000590"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HDL5801965.1"
                     /translation="MFIKPNQTSCPLQISEQDIAFMQYALDLADLAEAKGEIPVGAVL
                     VDKNQQIIGRGWNQTIQLCDPSAHAEMQAIRQAGQTLGNYRLLDCTLYVTLEPCPMCA
                     GAILHSRIKRLVFGASDYKTGAVGSRYHLFEDYKMNHFLEVHGNVLGRECSQKISDFF
                     KQRRLQKKGDALIK"
     gene            complement(23603..24683)
                     /locus_tag="PXF40_000591"
                     /pseudo
     CDS             complement(23603..24683)
                     /locus_tag="PXF40_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
     gene            complement(24686..25609)
                     /gene="truB"
                     /locus_tag="PXF40_000592"
     CDS             complement(24686..25609)
                     /gene="truB"
                     /locus_tag="PXF40_000592"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HDL5801966.1"
                     /translation="MSRPRKRGRDIHGVFLLDKPQGMSSNDILQKVKRIFQANKAGHT
                     GALDPLATGMLPICLGEATKFSQFLLDSDKRYLVTAKLGERTDTSDAEGQVVETKAVA
                     VTKSQILAALEKFRGDILQVPTMFSALKHNGKPLYEYARAGITVEREARPITIFELNF
                     IEYKAPFLTLEVHCSKGTYIRTLVDDLGEELGCGAHVTMLRRTAVADYPIEKMMSYAD
                     LQNLAENQPLAELDQHLLPMDTAVSALAKINLSSEQTKAVGFGQRIRFDNLNQLYGLV
                     RLYSEDEQFLGVAEITNDTVIRPNRMINLTE"
     gene            complement(25612..25992)
                     /gene="rbfA"
                     /locus_tag="PXF40_000593"
     CDS             complement(25612..25992)
                     /gene="rbfA"
                     /locus_tag="PXF40_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HDL5801967.1"
                     /translation="MSREFKRSDRVAQELQKEVAVILQREVKDPRIGMVTVSDVEVSR
                     DLAYAKIFVTFLFDNDAEAIKQGMQGLEKASPYIRTLLGKAMRLRIVPELRFIYDESL
                     VEGMRMSNLVSSVIKNDEEKHKED"
     gene            complement(26077..28644)
                     /gene="infB"
                     /locus_tag="PXF40_000594"
     CDS             complement(26077..28644)
                     /gene="infB"
                     /locus_tag="PXF40_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HDL5801968.1"
                     /translation="MLVQLSKEDNKMTEEKKTLSLGGARKASKVNTTTTSGKVKAVEV
                     KEKKPKIDAKALQEKAAKEAAAAKARAEKEAAEKLAKEKAEAEAKEKAAKKAAESTAS
                     KPISVPVMPSSKAKEEKPKAQQVQPKQEKAVDPEKEAKRKEEAELRRKQEELAQQKAE
                     MEAKRAAENARRLAEIAREEAEDNGNEDFDDERFTSSYAREAERDNDRRSEGNRGRNG
                     KGNVAKAKKGGREEDKNERSADRRNHKEVKGKGKQGKKGAALQQAFTKPAQVVKADVV
                     IGETITVAELANKMAVKATEIIKMMMKMGEMVTINQVIDQETAQLVAEELGHKVILRK
                     ENELEEAVLEDRDTHAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGITQH
                     IGAYHVETDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ
                     HAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHEVISEKFGGDVQFVPVSAKKGMGID
                     DLLEAIILQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLNKGDIVLCG
                     FEYGRVRAMRDENGKDVESAGPSIPVEVLGLSGVPAAGDEATVVRDEKKAREVALYRQ
                     GKFREVKLARQQKAKLENMFSNMAAGDVAELNIIVKADVQGSVEAISQSLMELSTDEV
                     KVKIVGSGVGGITETDATLAAASNAIMVGFNVRADASARRVIENENIDLRYYSIIYEL
                     LNDVKAAMSGMLQPEFKQEIIGLAEVRDVFRHPKFGAIAGCMVTEGIVKRNNPIRVLR
                     DNVVIFEGELESLRRFKDDVSEVRNGMECGIGVKNYNDVKVGDQIEVFEVVEVKRTI"
     gene            complement(28629..30125)
                     /gene="nusA"
                     /locus_tag="PXF40_000595"
     CDS             complement(28629..30125)
                     /gene="nusA"
                     /locus_tag="PXF40_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HDL5801969.1"
                     /translation="MSKEILLAAEAVSNEKQLPKEAIFEALETALTIATKKSRDLDID
                     VRVVVDRKTGDFQTFRRWAVVENVNNMTREISLEAAQFEDPNVQLGDFIEDEVESIEF
                     GRVAIQTFGQVVKTKIREAEKTKIIDEFRSDLGKIILATVKKVTRDNIFLELQGKSED
                     IKGEAVIVREDMIPRENFRPGDRVRGVLYEIKPESKGPQLFVTRAKPVMLEELFKLEV
                     PEIGEGVIEIKGSARDVGSRAKIAVKTHDKRIDPVGACVGMRGARVQAISNELGGERV
                     DIVLWDENPAQFVINAMAPADVSSIVINDETHSMDIAVEAKNLAQAIGRNGQNVRLAT
                     QLTGWALNVMTVEELTKKSEEEDGKVINLLTSALEIDEEFAQVLIEEGFTSLEAIAYV
                     PVDTLTAIDGLEDEDLVEELQSRAKNAITKKALEEEKLLKSAQIEEKLLTLEGMDRHI
                     AFKLAEKQITTLEELAEQGVDDLADIEELSEEKAGELIMAARQICWFN"
     gene            complement(30146..30607)
                     /gene="rimP"
                     /locus_tag="PXF40_000596"
     CDS             complement(30146..30607)
                     /gene="rimP"
                     /locus_tag="PXF40_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HDL5801970.1"
                     /translation="MATLEQKLEDLVLDSIEALGFELVGIECQRAGRFLTVRLYIDKE
                     GGVTIDDCSDVSRQVSAIFDVEDPIADKYNLEVSSPGLDRPLFTVAHYERFIGQDVVI
                     HLRIPMFDRRKWQGKIKQVEGDFITLTVENEDRQFAFGNIQKANLVPVFNF"
     gene            complement(30834..30910)
                     /locus_tag="PXF40_000597"
     tRNA            complement(30834..30910)
                     /locus_tag="PXF40_000597"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30874..30876),aa:Met,seq:cat)
     gene            complement(30959..33121)
                     /locus_tag="PXF40_000598"
     CDS             complement(30959..33121)
                     /locus_tag="PXF40_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase SLT domain-containing protein"
                     /protein_id="HDL5801971.1"
                     /translation="MWKKTLIAVFLASQYAFAVGTGKEPSKSYTETELKQLKNDWLAI
                     YQKELQYAENLRLKQRENFQQINYLADAAISQKNLSLSTEQIIQRLLLTLAGYPLEMK
                     AEWKLLNAKITLKQATESEVKAFISKYPDSLYQRQLQNLMFELLYREQKFPELLEYAQ
                     NVKQSSLADQCRLFSARYELAASKAQINPEVSQVTEQKAENAELLALVQEFDRFWLAT
                     PKLTSDCANLESYWRDQGLKTDEKMRLKAVELIKQNANAELANLAANVNNENLKIWLS
                     SVEKVANNPADLQNFIENQPLDSPFYADNKAIIQQLFAKYVRTLSENMENPSFQQYQT
                     WAEKYQLSSEEINGWKNAFITRFFDNPEPTFQFWRDEQIKLLKTDNLTERRLRMAIWQ
                     KADLNEWLVLLSQQAKEKAEWRYWAAKEEKNEAKRKVDFESLAKERGFYAMLAAQQLG
                     IVYQIPMLEVPELTQAQLELYANQLARIQELRELGQFDQARKIWIDWIKNIKPEAGEN
                     TPTKIQLALIKYAKDKNWYDLAVEGTIQTKAFDYLDLRLPNAYSDWFDLHLQDKKISK
                     TFAQAIARQESAWNAQAQSHANARGLMQLLPTTAQKTAKDNGLTFKDGNDLFQPFNNI
                     MLGTTHLMELNEKYPNNRILIASAYNAGAGRVEQWLKRSNGQLAMDEFIASIPFYETR
                     GYVQNVLAYDYYYQMLYSDINDKNGLKMFYQEELTRKY"
     gene            complement(33224..33535)
                     /gene="yciH"
                     /locus_tag="PXF40_000599"
     CDS             complement(33224..33535)
                     /gene="yciH"
                     /locus_tag="PXF40_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HDL5801972.1"
                     /translation="MTLVYSTETGRIKSEVIKEERPKGDGIVRIQRQTSGRKGKGVCL
                     ITGLDLEDKALNSLASELKRKLGCGGSFKDGVIEIQGDNRGFIKQILEQKGFKVKLAG
                     G"
     gene            complement(33618..34310)
                     /gene="pyrF"
                     /locus_tag="PXF40_000600"
     CDS             complement(33618..34310)
                     /gene="pyrF"
                     /locus_tag="PXF40_000600"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HDL5801973.1"
                     /translation="MNNKVIVALDYETEREALEFVDLVDPSLCRLKVGKEMFTTLGTN
                     FVKQLHERKFDVFLDLKYHDIPNTVARAVRSAADLGVWMVDLHASGGLAMMEEAKKIL
                     EPYGKEAPLLIAVTVLTSMEDLDLLQIGINASPMEQVIRLAHLAQRAGLDGVVCSPQE
                     VEVLRTHCGQDFKLVTPGIRPKGTDFGDQRRVMTPKQAVETGSDFLVIGRPITQAQDP
                     LAVLKSINQSIS"
     gene            complement(34334..35530)
                     /gene="lapB"
                     /locus_tag="PXF40_000601"
     CDS             complement(34334..35530)
                     /gene="lapB"
                     /locus_tag="PXF40_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HDL5801974.1"
                     /translation="MLELLFLLLPIAALYGWYMGQRSAKKDQETASNKFSREYVTGLN
                     FLLSNQQEKAVDLFLSMLQKQESENHIASESQFEAELTLGNLFRSRGEVDRALRIHQT
                     LVNSPHYSFDQKLLAKQQLAKDFMVAGFYDRAENYYISLVDEPEFAKYSLSQLAVIYQ
                     KTREWKKAINVTEKRLRIEPDADKIPLSHFYCEYAQGVKFDDKAAFIESLNKALEYYP
                     QSTRASIILGDFYLEEGEYLRALSYFEQILVQDPDYISEVLGRIKQSYMALEDLNGYE
                     LFLIRANRVKHNSSVDIALTEFIEEKDGINAAHSKLYQQLSTYPNLITFHRFIRYQAD
                     FAEEGNGKESLVLLHNMVGNQIKRSFQYRCLNCGYQSYRLMWQCPSCNQWEKIKPVQS
                     IEGIIQ"
     gene            complement(35534..35821)
                     /locus_tag="PXF40_000602"
     CDS             complement(35534..35821)
                     /locus_tag="PXF40_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HDL5801975.1"
                     /translation="MIKYILGILIVIAVIIVAVTIGANNDQLITFNYIFAQSELRLST
                     LVAILFGLGLILGWLVTGIFYLKIKFQNVALNRRVKRQAQQITELTTPKAE"
     gene            complement(35858..36139)
                     /locus_tag="PXF40_000603"
     CDS             complement(35858..36139)
                     /locus_tag="PXF40_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HDL5801976.1"
                     /translation="MTKSELIESLASKNPSLPIKMVEHCVKELLEQLTATLEEGERIE
                     VRGFGSFSLHYRQPRLGRNPKTGESVLLGAKYVPHFKAGKDLKERVDLL"
BASE COUNT        10526 a         7946 c         6912 g        10767 t
ORIGIN      
        1 atgaaaccaa ccaataaagc agattttcaa cgtgtgatca atgcagctgg ctactctatg
       61 aaggggttaa aagccgctta tattaatgaa gccgcctttc gccaagaaat ttggtgcgct
      121 actattttat tccctctagg gcttattcta ggcgaaacca atattgaaaa agcattatta
      181 gtaggcacag ttttacttgt tttagttaca gaactactca atagtgcggt tgaatctgtt
      241 gttgaccgca ttggggctga tttccacgag ctttctggta gagctaaaga tattggctct
      301 gcagctgtat ttatggcgat ggttttactc gctataactt ggatattaat tttgttttgt
      361 taactctatt tttcaaccaa cactcttact gaggtattta tgcgcttaaa aaaaacatta
      421 ctttcggtag cactacttag tgcaacatca gcaatggcct acgagacagg taaaacatat
      481 cgttttacgg ttttacatac taacgatata cacggtcact tttggcaaag tgataaaggc
      541 gaatacggtc tcgctgctca aaaaacattg gttgataata ttcgcaaaga ggtcgcagaa
      601 aaaggtggtt cggtattaat gctgaatgca ggtgatgcga atacaggcgt gccggagtca
      661 gatatgcaaa atgcacgtcc tgatattgaa ggaatgaatg cgattggtta cgatgcaatg
      721 gttctaggta atcacgaatt tgattaccca ctgcaaattc tctctatgca agaaaaatgg
      781 gctaaattcc cctttatttc ggccaatgtc attaataaaa aaacggataa acccattgta
      841 aaaccttacg tgatgttaga acgaggcgga ctaaaaattg ctgttatcgg attaacaacc
      901 gaagataccg caaaattagg taatccagat gtaacggaaa atgccttttt caaaaaccct
      961 attgaaacag caaaaaacac attagctgaa attaatcaaa aagaaaaacc cgacgtacgt
     1021 atcgctttaa cccatatggg ttactatttt gacggtaaac atggtactaa tgcaccaggt
     1081 gatgtaacaa tggcccgtac cttagaaaaa ggagcgttcg atttaatcat tggcggtcat
     1141 acccacgata ctgtttgtat tgatgaaaaa ggtcaattca aagccaaata tacgccgggt
     1201 gaggaatgta aaccagactt ccaaaacggt acttggattg tgcaagccgg cgaatggggc
     1261 aaatttgttg gacgggctga ttttgagttt aaagatggaa aagctacctt ggtaaaatat
     1321 gaattaattc cggtcaactt aaaaaaaacc attaaaaaag aagacggtac taaagaatac
     1381 cgactttacc agcctgaaat caaagccgat gaagcaacct ataccttatt gaaaaaatat
     1441 caagatgagg gcgataaaaa gcttaatatt gaagttggtc gtgtgaaagg gttattagac
     1501 ggcaaacgtg agcatattcg cttccaacaa accaatctcg gtcgtttaat tgcacaatcg
     1561 caaatggaaa gggtaaaagc cgatatcggg attatgaact ccggcggtat tcgtacctcc
     1621 cttgaagaag gtgtaataac ttataaacat attctgactg ttcaaccttt cggtaatatg
     1681 attgcaacgg tggatttaaa aggacaagaa ttgttagata ccctcaccac tattgctctg
     1741 aaagaagttg atactggcgc ttatcctcaa tttgccggca tttcaatggt agtcgaccgt
     1801 acagcaaaaa ctatttctga tgttaaaatc ggtggcaaac cttttgataa agagaaaact
     1861 tataaagttt ctctgcctga ctatgttgcg gctggtggcg atggctaccc attactgaaa
     1921 aaacacccta gctatgtcaa tacaggcttt attgatgccg aaatgctgaa aaaattcttc
     1981 gaagaaaata aaattattga ggcagataaa tacgatccaa aaaaccagat cattttcaaa
     2041 tagagctata gaaaatgaaa ctcactctgg cagtctctgc tcaaaagagc tgtggctgcc
     2101 tgtagattgt tttcttactt tcaagtgtta taggaaatcg ataaaaaatc cctaccaaat
     2161 taattcatca ccatatgatg aaaattaaaa aacctctggc aatactttgc caaaagtctt
     2221 tgacttttat agggtaatat cactgcttat tagcctttaa cacgttgttc caaaatcaca
     2281 ttcagtgttt tttgtttctg tttcaacgca ttttcgggtt cggctttaac tagtaaggta
     2341 taaattaaat caagaacgaa aagttgtgac attttagtac cgatagaatc tccttgcata
     2401 tgcccctgtc gattaccatt aattaacaca taattagcct cttccgtgac gggggaacgt
     2461 aaattgtgtg taatcgcaac cgttgtcgct ttatttgcac gagaaaaacg tagtgatttc
     2521 acaatttctt cagaatagcc tgaatgacta atccctataa ctaaatcccc ctctttcacc
     2581 aatgccgcct gcatatacat aaaatgatta tttgtgactg catcggtttg tagcccaata
     2641 cgcattaatt tatgttttgc atcttctgcg gttaacccag aagaacccac tccaaataaa
     2701 aagatccgtt ttgccttacg taattcttca acaacttttt ccaacacgtt aaagtcaagc
     2761 aaattaatag tctcttcaat aacgttatct aaactcactt tgagcttctc agcaatatct
     2821 ttcgatgtat ccgattctga aacatccgta tcaagcaata ctctattatc ttgattttgc
     2881 gtagccaact ctattgcaag ctctaattta aagtcggtat aacctttaaa acctaatgta
     2941 cgacaaaaac gaataaaagt tgcttcacca acatctaatt gtttggccac ttcagataat
     3001 gaacattggc taagtaattc cggctgagat aaaatagcag cagctatttt cttctctgtt
     3061 ttggttaaac tattttgtag cgagctaatt gtattaagaa tttttccccg actagacata
     3121 gtagcctcct aaatcaattc aacaggtact ttcaccacca gttttttcaa tgttttgttg
     3181 ccattcaccg aatttccagg cttatgtggt tcataaggga ggaaaatagc gaacatattt
     3241 ggcttgagga tcaagttatt tttatcatca atctcagctg ttaattggta gtcatcttca
     3301 tctcgatatt catcatactt agataaatct ggctggctta acccgtattc aatcatttct
     3361 tcgccgtcta tcaataattg aatatcgata aattttcggt gtaactctgc ttttttcccc
     3421 tcagctggcg tagtttcaaa tgacattaca ttcatgcgaa taccattttc taattcttgc
     3481 cagcctaatt ccaaattaac taaatctaaa ctttttaatt ttttacaaag gcgagcgaat
     3541 actggtggaa gagattttaa ataatcatct cttgataaat cggctaatat catataattc
     3601 tcctaaaaat aactaattct aataatctgc tccatactac taaaatttat gaagatacac
     3661 tccaatagaa gtaggataat tcgtaaaata tataatctca ataagcaaac atcaaaaatg
     3721 agaagttgat caaattttaa aaaatacttt ttgcaaaaaa ttagctaaat ttgaccgctt
     3781 gttcgcaaaa gggaatgcaa taaacgaaaa aggaagcctt cgcttccttc atttaaatgt
     3841 taagagaccg caaactgaag atttgtactc gccaatattt tttgctcttc ttctaaatct
     3901 attgaaatca gtggattatt cgctaagaag ccctgttcaa aggtaagttg ccaagcatta
     3961 ttttcaatca ccaaattcaa ctgtttcggc actacagtcg cttggcgaga acggtttaat
     4021 agcaccgcta gccggaaaac ccgtaccaac gttaatacat ctctacattg gtaacggttg
     4081 atactacgaa tatccgagcg tttgaatcct ttaaggtggt atcgcattaa taccgataga
     4141 agggtttgct gttcaaaatc aaatcccggt aaatctcggt ttgcaatcaa ataagcagaa
     4201 tgacgatgca cattattgtg gtttacaaca ataccaatct cgtgtaataa acttgcccat
     4261 ttcagcattg aacgcagatc ttgcacttgg cggcggttct tccaagtttt gatttggtca
     4321 aataaaatca acgccgtatg ctccaccctt tttgcttgct gtttatctaa agcaaattgc
     4381 tcagctaacg cttctgcagt ccgttggcga atatccccaa cttggaaact tttctccaaa
     4441 ccatacatta ccccttctct taaagccccg ttggaataac gtaatacatc aattctaaaa
     4501 gtgtgaaaaa gtgctaaaag aatagctaag cccggaacta gcacatctgc tcgttcatca
     4561 agtaagcctc gtagcttaat ctcatttaac gatttaaact ctaggcaaat atcaataatt
     4621 ttctgtaggc ggctttctgt aattaagcca tcacgatagc cattggcaat cagcacttga
     4681 tggacggttt taatcgtacc ggaagaacct aaagcatagt cccaacctaa ctctttgtac
     4741 tcccacatta aatcttcgat tttttccatt gcaagctgat aggcactatc aaaacgctca
     4801 atcgttaatt ccccctgcgg gaaaaagcgt tttgcaaaac tcacacaacc catatgacga
     4861 ctttccgctc gaatcggggt aaagtcatca ccaatagtca tttccgttga accaccgcca
     4921 atatctacca ctaattttct gccagtttcg ggttgggtat ggctaacgcc cgaataaatc
     4981 agcctcgcct cttgttgtcc ggaaataatg gaaatcgggt aaggaaatac tgctttcgct
     5041 tgctccagaa aagcttggtt attgattgct ctacgtaagg tataagtgcc aaccaccttc
     5101 acattctctg cagagaaccc ttctaaacgt tttgcaaata aagctaaaca agcaatgcct
     5161 ctatcaatcg catcttggct taatactaag ttttcatcaa gcccatctgc cagccgtaca
     5221 cgccgtttca aacgggaaag cacttgaatg gaaccattta cgatacgggc tacaatcata
     5281 tgaaagctgt tcgagcctaa atcaatagct gcaaactctc taggagcaat atttgatgac
     5341 ataatgaaac cctgtaccaa taactgaaat aagtaagata ttaccatttt tgagccctag
     5401 atatcactac aaatttagcg ttattcgcga gaattaattt aaatcataaa atgtgataaa
     5461 tttttttgac gaattgacgg aaaaagaata ggatttacga gcttacttaa ttcaacacta
     5521 catcaaggga gattgatatg tctgaagtga ataaatcatt ccacgatatg ctggaatatg
     5581 tgcatcttta tcgtctaaaa aacaaactgc accgtgaaac ggcggataat gatcgcaaaa
     5641 ttcgagataa tcagaagcgt gtacttttat tagataacct aacgcaatat attaccgacg
     5701 aaatgtctat cgaggaagtt cgagcgatta tttccaatat gcgtgatgac tatgaaaatc
     5761 gagtagatga ttatatgatc cgtaatgcgg aactttccaa acaacgccgt gaaatccgcc
     5821 aaaaaatggc ctctcacaaa caagcaccaa ccaataaaaa agcataaaaa gccaagcggt
     5881 ctgatttgca aaaaaatatg caaatcagac cgcttgtgat taagcagaga ttaattcagc
     5941 tttttcattg catctgccac aaattctgct tccggtccca aaatcacttg gtagccattc
     6001 tcgcctaatt tgatattacc ttttgaccct aacgctttca atttggtttc gtctgctttc
     6061 gccgtatcat ttaaggttag gcgtaagcgg gtaatacaag catcaatgct ggtaatattc
     6121 tctttaccac ctaatgcttc aacaaatttg gcagcttgtt cgctacgaga aacagtattc
     6181 actgtttgta cttcgctatc ttcctcacgc cccggcgttt ttaaattaaa ggcttggatc
     6241 actactcgga acaatacata gtaaattact gcgaatacga taccttgggc caataacata
     6301 taccactgca ctgccagcgg atttcgtgtc gataacacta aatcgaccaa ccctgcacta
     6361 aaaccgaaac cggcaatcca ttccattgag gctgcaatat aaacagataa tccggttaat
     6421 aatgcgtgaa ccacataaag cacaggtgca acaaacataa aggcaaattc aagcggttcc
     6481 gtaatgccgg tgaagaacga agctaaagca gcagcaaaca taatagaggc tacttgcatt
     6541 ttcttagccg gtttcgcact gtggtaaata gctaatgctg ccgcaggtaa gccaaacatc
     6601 atcatcggga agaaaccagc ttgatacata cctgttactc ctatcactgc tttgccctca
     6661 gccaatgatt ttgccccacc taagaagttt ggaatatcat taatgcctgc aacatcaaac
     6721 cagaaaaccg agtttaatgc gtggtgtaat ccaaccggaa ttaataaacg attaaagaaa
     6781 gcataaatac ctgcccctaa cgcccccata tctttgatag attccccaaa agagactaaa
     6841 gcaccaaaaa taaccggcca gacataaagc aagataaatg acaccacaat cggcaccaat
     6901 cgtttaccgc taaagaaaga caatgctttc ggtaactcta cttggtagaa acggttataa
     6961 atttcggctg aaataacccc tactaagatc ccgataaatt ggttgttgat tttaccgaat
     7021 gctgcaggca cttgatcaac tgcgatccct tttagctgag caacggtccc cggagacaac
     7081 aaagtggtaa ttactaaata cccgactaaa ccggataatg ctgctgcccc atctttttct
     7141 tttgacatac caaatgccac acccacggca aatagaatag acatattatc aataattgcc
     7201 gccccagatt taatcagcaa tgccgctaat tggctatttg ttccccagcc gtccggatca
     7261 atccaatagc ctatacccat caataatgct gctgctggta atgcagcaac cggcaccatt
     7321 aatgcacgcc caattttttg taaataggtt aatgtactca taaaagcctc caaaaatacc
     7381 tcataatgag taacttaagc atagaaaaaa accgattaaa gaacaatcaa ataaatttgg
     7441 ttttgtgatc catttcaaaa tattttttag gagtttttat tcaacattag aaatatgttt
     7501 actttttatc gctatatttt aaataattac ctaaatagca ttggattacc taaatattca
     7561 ttgacaaaac attaataaaa cggtatttct atgcacactt ttcaatactg ttgaaaaaga
     7621 gtaatgggct tgccattacg ggagaggtgc aacactcagg caacttgatt ttaggcaact
     7681 agggccgttt gagaattaag tgatgggagt gattgccgag gtgtgaattc actagactgg
     7741 aattaacatc ggctgaatag gttgaatcct atcagctgtc atttaatagg ttatttcacc
     7801 atattaaatg gagtgctctg attaattggt tcaacaataa aaccgtataa tctactcaaa
     7861 tttcctttcc gaatatcccc taacacaata tttatctatt tttgttttaa ggaaattttt
     7921 attatgtctc atctttctgt ggctaaattt ggtggtacaa gtgttgcaaa ttttgatgca
     7981 atgacctctt ctgccaatat tgtaattgct gatgcaaata ctcgtgtggt ggtactttct
     8041 gcctctgctg gcgtaaccaa ttacttagtg gaacttgcta acggctgtga aaaagaacac
     8101 cgtgatgaag tcatcgcagc agtccgccaa attcaataca atattattga aaaattacaa
     8161 catcaagatg ccgttaaagc ggaaatcgac gaattattag aacgtattga aacattagca
     8221 gaatcagcca gccttgctac ttcagctgcc ttaagtgatg agttaatcag ccatggggaa
     8281 atgatgtcca ccaaaatctt cacgcaatta ttaattgaac gtggacaccc ggcagtatgg
     8341 gtagatgtgc gtgacgttgt ggcaacaaac agccattatg gaaaagcagc accaaatgac
     8401 gagaaaaccc agcaacaatc agacaatgtg attaagccat taatcgcatc aggcaaaatt
     8461 gtgattacac agggctttat tggtcgtgat gatgaaggca aaaccactac tttaggacgt
     8521 ggcggttcag actactctgc tgcattgtta gcagaagtat taaatgctaa cgatgtactc
     8581 atttggacag acgtaccggg gatttatacc accgatcctc gtgttgtacc gaacgctcaa
     8641 cgcattgaca caatggcatt taacgaagcg gcagaaatgg caacatttgg agcgaaagta
     8701 ttacacccag caaccttatt accggcagtg cgtagcaata tccctgtata tgttggctca
     8761 agcaaagcac cggaacaagg cggcacttgg gtaacccgtg atccacaacc acgcccgact
     8821 ttccgtgcga ttgcattacg ccgcaaccaa attttactca cgctttccag cctttcaatg
     8881 ctacacgcac aaggtttctt agcgaatgta tttgcgattt tagcgaaaca caaaatttcg
     8941 gttgatgtga ttaccacttc cgaagtcagc gttgcattga ccctagataa aacgggctca
     9001 gcctcttcag gtgcagatat gttatcagcg gaattactcg atgagcttaa cgcatattgc
     9061 aatgtgcaag tagaaagcga cctcgcttta gtcgctatta tcggcaacaa cttacacgct
     9121 cagtccggtg tggcgaaaaa attattccac actcttgaga attacaacat tcgcctaatc
     9181 agctatggag caagcagcaa taatgtttgt accttagtga aaaatgcaga agcagacgat
     9241 gtggttcgtt cgcttcacaa aggcttattt gaataagcaa taactccatt gcaagcggtt
     9301 atttggggca aaattgttgg atttaccccc taaccgcttc ttctctttac tcaacaatct
     9361 ctaccgttga attggtacta agccctctca ctagctgtga gccttttctt gctcgttcgc
     9421 cacggtagtt atcaacatcg ctcggtttta atgtgatttt gcgtttaccg gacacaaaga
     9481 ccagcgagtt ggttggtttg atgactaata aacgggctaa atattcatca ccggattttg
     9541 ccgctgcggc ggaaatattg atgattttat tgcctttacc tttggaaagt tgaggtaatt
     9601 cactcaccgg gaaaaccaac attctgccaa cattactcat cgctacaagc gataaatttt
     9661 catcattttc caataattgc ggcggcagta cttttgcatt ttcggttaaa gaaataaccg
     9721 ctttgccggc tttattacga gaaactaaat ctgcaaaggt gcaaataaag ccgtaacctg
     9781 aatcggatgc cattagcact ttagtttctg gacttgccat tagcacttgc tgcactactg
     9841 caccttccgg tagggtgatt ttgcctgtaa gcggttcgcc ttgcgagcgt gccgaaggca
     9901 gtgaagttgg atcgagagca taagctcgcc ctgtactgtc taaaaatacc acaggctgat
     9961 tacttctacc ccttgcgtgg gcaagataac catctccggc tcgatggctt agggcttgaa
    10021 catcaatatc gtgtcctttc gcacaacgta cccagccttt ttcagacaaa atcacagtca
    10081 catcttcggt tggagtcaag tcactttccg caatcgcttt agactccgct cgttcaacca
    10141 atggtgagcg gcgtgggctg gcaaatgctt tggcatcggc ttgaatctct ttcttgatca
    10201 ggctgttcaa acggcgttcc gagcctaaaa tcagttgcaa ttcatcacgt tctttttcca
    10261 gttcggattt ttccgcctgt aattgatgct cttccaattt ggctaagtgg cgtaaacgta
    10321 agttcaggat cgcctctgct tgcacatcgg tcagattaaa acgagccatt aactcggctt
    10381 tcggctcatc ttcattgcga ataatctcaa tcacttcatc aatattgaga aatgcaatca
    10441 tcaaaccgtc taaaatatgc aagcggttta aaattttatc taatcggtaa ttcaggcggc
    10501 gagtgacagt ggtacgtcta aaactcagcc actcattgag aatagtcagc aaattcttca
    10561 ctgccggctt gccgtctaag ccaatcatat tcatattgac tcggtagctt ttctccaaat
    10621 cggtcgtcgc aaacaggtga tccattaacg catcaaaatc aatgcgatta gagcgtggca
    10681 caatcacaat gcgaatcggg ttctcgtggt cagattcatc acgaatatcg tccaccatcg
    10741 gtagtttttt attccgcatt tgggttgcta cttgctcaat aatttttgaa ggagaggctt
    10801 ggtgcggcaa ggctgaaatc acaatttcac cctcttcttt tttccacacc gcacgcattt
    10861 taatagaacc acgcccctgc tcatacattc tggcaatttc cgcttttggt gtgatgattt
    10921 cagcctctgt cgggtaatcc ggcccttgta ccacgcttag tacatcatca agcgttgctt
    10981 tcgggttatc cagcaacatc acactggcat cagccaattc attaatattg tgtggtggaa
    11041 tatcggttgc cattcccacc gcaatcccca tcgtgccatt caacaaaata tgcggtaaac
    11101 gagccggcag atatttcggt tcttccaacg agccatcaaa atttggctga taatccaccg
    11161 ttccttgccc taactcgccc aataaaattt ctgcaatttt agacagtttc gattcggtat
    11221 aacgcattgc agcgaaggat ttcggatcgt ccggagcccc ccagttgcct tgtccgtcca
    11281 ctaacggata gcggtaagag aacggttgag ccattagcac cattgcttta tagcaggcac
    11341 tatcaccgtg cggatggaat ttacctaata catcccccac ggtacgggct gattttttat
    11401 actttgccga ggcgtttagc ccaagttccg acatcgcata aataatacgg cgttgcaccg
    11461 gtttcaagcc atcgccaata aacggcaatg cccggtccat aattacatac atcgaataat
    11521 tgaggtaagc atcttcggta aaacgcttaa tcggcatctg ttcaatgcct tcataattga
    11581 tttctgtggt cattttttat cgatatttat attaaaaaaa cgagggctat tttctacgat
    11641 ttagcctgtt tagtctagcc tgaaacacaa gcggtcgttt tttctgattt ttttaccatt
    11701 gtcatcattt tgtcatattc tttttctaca ctaagcacgt gaaattaact cacgctaact
    11761 ttaaggagaa caatatgatt gccaaacgat ttaaactact taccgtttta ggcatttctt
    11821 tttcactttc tgtcgcagca aatgctcaaa ccatcacagg agccggtgct tctttccctt
    11881 atcctatcta cgccaaatgg gcaggtttat atgaaaaaga gaccggtaat aaaatcaatt
    11941 accaatctat cggttccggt ggcggtcagc aacaaattat tgccaaaaca attgatttcg
    12001 gtgcttctga tgacccgatg aaaggcgaaa cattagcaga acacaaactt ttgcaatttc
    12061 ccgccatcat tgggggaact gtaccggttg tcaatattcc tgaacttaaa tcgggcgaac
    12121 tgaaactgtc cggtaaagtt cttgccgata tattcctagg caaaattaca caatggaacg
    12181 atccggcaat tgtcgcactt aatcaagata tcgccctgcc ggcaaaaaca attttagtcg
    12241 tacgccgctc agacggttca ggcacaactt tcggttggac aaactatctt tctaaagtct
    12301 ctgccgaatg gaaggagaaa gtcggcgaag gaaaatcggt gaaatggccg gtcggacaag
    12361 gcggaaaagg aaatgaaggt gtcgcagctt atgtgaaaca gctcaagtat tctattggtt
    12421 acgtagaata tgcctatgct aaacaaaatg ctctggcttg ggtttctatg caaaatgcag
    12481 atggtaaatt tgttcagcct tcccgtgaaa cgtttgctgc tgccgctgct aacgccgatt
    12541 ggagccaaac agccggtatg ggcgttattt taaccaacga agcgggagaa aaagcctggc
    12601 cgattaccgc cgccagtttt atcttgattc atcaacatag cgacaaacca gagcaaacta
    12661 aaggggtatt taaattcttc gactgggcat ttaagcacgg taaagatgcg gctgccgaac
    12721 tggattatgt gcctctaccg gataatgtag tagagaaaat ccaaactcaa tggaaaacgg
    12781 aagttaaaga tggacaagga aattcgctct actaatgcaa aacgaccgct tgtatggagc
    12841 ttaactaaca acaagcggtc gttttttcac aacattttgc aaaagagttg tcactatgca
    12901 taaacataaa attgataaca aatgcttaaa ccatccttgg gtagaggggt tatttcatca
    12961 cacaacccgt ttctttgctt tgctggtttt tgccttgttg gtggtggtgc tggtttcatt
    13021 attgcttggc agttgggaag cattaagccg attcggggta tcattcctat gggaaaacga
    13081 gtggaaccct gtgaatgacc gatacggtgc attagtgccg attatcggca cattgatttc
    13141 tgccggcatt gcattagtca ttgccgttcc ggtctcgttc ggcattgcga ctttcttaac
    13201 cgaacttgca ccgcaatggc taaaacgccc tgtcggcaca gcggtagaaa tgctagcggc
    13261 tattccctct attatttacg gtatgtgggg gctgtttgta tttgtaccct tatttcaaga
    13321 atatgtgcaa ccgtatttga tagatacatt tggtcagctt ccctttatcg gtatgctttt
    13381 tagcggagct cctttcggga tcgggctatt cagtgccggc ttggtattgg cgattatgat
    13441 tattcccttt attgcctcaa ttatgcgtga tgttttcagt gttgtaccgc ctttactgaa
    13501 agagtctgct tacggtttag gctcaaccac ttgggaagtt atttggaaag tcgtgctacc
    13561 ttacaccaaa accggagtaa tcggtgcaat tatgctcggg ttaggtcgag cattaggcga
    13621 aacaatggca gttacctttg tgatcggtaa tgcctttatg ctacctgatt cggtattttc
    13681 cccttcaacc tccatcgctt ctgctatcgc caatgaattt aatgaagccg gcggattaca
    13741 aaaatcagcg ttgatgagcc tagggctaat tctgttcctt attacttcga ttgttttagc
    13801 cgcttcacgt ttattaatcg cacgaatggg taaacaggaa ggaaaacgag aatgaaaaat
    13861 taccaaaacc gacgctttta ttgccgaaaa ataaaaaatg tcttgatgtt aagtcttgcc
    13921 tattccgctg tattatttgg cttattttgg ctggtctgga ttattgttac tttactccaa
    13981 aaaggtatcc ctgcactgtc ttgggaactg tttacccgcc cgactcctgc accaaatgaa
    14041 acaggaggat tacgtaatgc aattgtcggc tctatactga ttgtcagtac cgcaacactg
    14101 attgcaacac caatcggtat tttagccggc acttacttga gcgaatacgg gcgttatacc
    14161 aaattggcaa aattcacccg ttttttgaat gatgtgttgc tctctgctcc ttctattatt
    14221 atcggcttat ttatttatgc gatttatgtc gcacaggtta aacactattc aggctgggca
    14281 ggctcattag cattggcggt attagtgatt ccgattgttg ttcgaactac cgacagtatg
    14341 ctcaatcttg tgcctaataa tctgcgtgaa gcagctgcgg ctctcggctg cccacgatgg
    14401 agggtaatta caatgatctc ttatcgtgcc gcccgctccg gcattattac cggcgtgttg
    14461 ctcgctgttg cccgtatttc cggagaaacc gcaccgctat tgtttaccgc attatccaac
    14521 cagtttgcct ctttagatat gaatgcacca atggcaaacc tccctgtggt gatttatcaa
    14581 tacgcagcca gcccgttcgc tgactggaat acattggctt gggcaggtgc aatgcttatt
    14641 actctgtttg tgctttctct taatatcatc actcgtctgt atttcagcaa aacaaaataa
    14701 ggactctata tgttaccaac ggatttagag acaaaattac atattaacaa cctcaatttt
    14761 tattatggcg atttccacgc tctgaaaaat atcaatatgc gtattgccaa aaataaagtg
    14821 accgcattta tcggtccttc cggttgtgga aaatcaacat tactgcgaac cctaaaccga
    14881 atgtttgagc tctacccgaa tcaacgtgca acgggggaaa tcaatcttga tggagagaat
    14941 ctactcacct ccgatacgga tatttcgatt attcgagcca aagtcggtat ggttttccaa
    15001 aaaccgaccc cattcccgat gtccatttac gataatgttg cttttggtat tcgtctgttt
    15061 gaaaaattgc cgaaatccga gctaaacgat cgtgtagagt gggcattaac caaagcggct
    15121 ttatggaatg aggtaaagca taaattaaac caaaatggtg acagtctctc cggcgggcaa
    15181 cagcaacggc tctgtattgc acgaggtatt gcagtgaaac ccgaggtgtt actgctggat
    15241 gagccctgct ccgcacttga cccgatttcg actatgaaaa tcgaagaact tatcaacgaa
    15301 ctcaagcacg actacacggt agcgatagtt acccacaata tgcagcaagc agcccgctgt
    15361 tctgactata ccgcttatat gtatctaggc gagctgattg aattcggtga taccaaacaa
    15421 attttcgaca aaccaaaatt ccggcagacg gaagattaca ttaaaggtaa aatggggtaa
    15481 tctgcaagcg gtcggtttta gtaaaaaatt tgcaaatttc tgcgataaat cgaccgcttg
    15541 tcacaccgca tcggagagga agaatgaata acaaaattct gatcgttgaa gacgaacgtg
    15601 ctattcgtga aatgctaagt ctctatctca gcaaacaata tcaggtaatt gaagcggaag
    15661 actaccaaag tgctatcaat aaactgggcg aaaaacccga gcttatttta ctggattgga
    15721 tgatgccggg gcgttcgggt atccatttaa ttaaatacct aaaaaaacag cctgaaaccg
    15781 aaaaaattcc aatcattatg ctaacagccc gcagtagcga agaagactgt attaccggtc
    15841 tgaatgccgg tgcagacgac tacattacca aaccgttttc accacaggtg ttgcttgccc
    15901 ggattgaagc agtatggcgg cgaagctatg atccgccaag caatctcatc aatatagacg
    15961 gattgattct tgatcaacag gcacaacggg ttttggttgc cgaacaggaa gtgaaattaa
    16021 gcggcacgga atataaactg cttcactttt taatgactca ccctgaaaaa gtgtatcgtc
    16081 gtgaacagtt gcttgatttt atttggggta atgatattta tgttgaggat cgcacggtag
    16141 actcttatat tcggcgattg cgtaagagtc ttgaacccta tggttttgag cgttatattc
    16201 aaaccgtacg tggctcggga taccgttttt ccaaccattt tcaggactaa taatgaaagt
    16261 taagctctca cttaaacact ttttattgga acttttgctg gcagcagccg ttgccggcgt
    16321 attcaatctg tttttccctg cttatttttt ctggtttagt ttttgtttac tggttctact
    16381 tatttggcat caccacaccg aatcttctct ccttcagtta ctcagaccta atgagcaaag
    16441 cggcaggtca aaagtaacga caatggagca tttatctcaa agtgccgcat tctatcacga
    16501 acgtttacgc caagataaaa tcaaaacctt acgtctgtta tcaaaattaa ataagcatat
    16561 tcaatactta cccgatgcga tcattatttg ccaagaaaac ggggagattt cttggtgcaa
    16621 taatgttgca caagagctat ttgagtttta ttgggacaaa aaatcaaata aaagcatttt
    16681 taatgtgatt ttttatcctg aatttaaaag ctatttccgc caacaacgac accatcgccc
    16741 attggtactg ctgactcata ataaacgcta tattgaattg aatctcaatc gatatgacag
    16801 taactccaga cttattgtcg cacgagatgt aacctctttt gtccgcctta tgcactcacg
    16861 acaaaccttt ttggcaaata tgaaccacga actgcgaaca cctcttacca tattacaagg
    16921 ttatttggaa atgctggaaa acgagccgca taatatggca ttacagcaaa aagcgctcaa
    16981 tgcgatgaaa gagcaaagtc aacgtatgac taacctgctt cgccaactct cacttttggt
    17041 taaaatcgag cattccaatg attccgaaca caatgaggtc cagatgtcgg cgttaatctc
    17101 cgccatacaa aaaaataccg agattttaag ccaaaatcag caaatactgt ttgatattga
    17161 gcctaattta acggtatggg gagatcaaga gcaactccaa agcgctgtat caaatttaat
    17221 ttacaatgca atacggcacg ccggtgaagg agttaccatt caaatatgtt gtcaacgtga
    17281 taatcaagag ccgaatactg cgattttcag cgtgcaagat gacggtattg gtatcgatgc
    17341 ccatcatatt acccatctga cagaacgttt ctatcgtgtg gacgaatctc gtagcaacaa
    17401 aaccggcggt agcggtttag gtctggctat tgtcaaacac gctcttgaac agcaccattc
    17461 cacactggaa attgaaagtg aagccggtaa aggaagcaga tttagtttta aactacctct
    17521 aataaaaaaa tagcgatgca atcaaactat tttcacaagg cttttcacaa actaatcccc
    17581 attttacact gaagttttga atttctttat aactgaggtg caagatcaaa ataataggcg
    17641 attttttata aaaatcacgc tatactagac aagttttatt tcttgttatt gagaggcggc
    17701 tatcaaaaat gttttactta aaagcctttt tgctagtcgc aatttagaga aataaaacga
    17761 caataatagt aaattcttta aaaggaaaat ttcaatgact ccaattgtaa aacagtttaa
    17821 atacggtcag cacaccgtga ccttagaaac cggtgctatc gcacgccaag caacggcagc
    17881 agtaatggca agtatggacg acacaaccgt atttgttacc gtagtagcga aaaaagacgt
    17941 aaaagaaggg caagatttct tcccattaac cgtagattat caagagcgta cttacgcagc
    18001 cggtcgtatt ccgggcggtt tcttcaaacg tgaaggacgt cctagcgaag gtgaaacctt
    18061 aatcgctcgc ttgatcgacc gtcctgtgcg tccacttttc ccagaaggtt tctttaacga
    18121 aattcaagtg attgcgaccg tagtatcggt aaacccacaa atcagtcctg atctggttgc
    18181 gatgatcggt gcatcggctg ccctttcatt atccggcgtg ccgtttaacg gtccaatcgg
    18241 tgcggctcgt gtcggtttta tcaacgatca attcgtatta aacccaacca ccagcgagca
    18301 aaaaatcagc cgcttagatt tagtggtttc aggtacagac aaagccgtgt tgatggtgga
    18361 atctgaagcg gatatcttaa ccgaagagca aatgttagcg gcggtggtgt tcggccacga
    18421 gcaacaacag gttgtaatcg aaaacatcaa agaatttgtt aaagaagcgg gcaaaccacg
    18481 ttgggattgg gttgcaccag agccaaatac agatttaatc aacaaagtaa aagcattagc
    18541 agaaacacgc cttggcgatg cttatcgtat cgtagaaaaa caagttcgtt acgagcaaat
    18601 cgatgcgatt aaagcagagg tgattgcaca acttaccgca gaagatgaaa ctgtttctga
    18661 agggactatc atcgacatca tcaccgcatt agagagccaa atcgtgcgta gccgtattat
    18721 tgcaggcgaa ccacgcattg acggccgtac ggtggatacc gtgcgtgcat tggatatttg
    18781 caccagtgtg ttaccacgca cccacggttc tgctcttttc acccgtggcg aaacccaagc
    18841 attagcagta gcaacattgg gcacagagcg tgatgcccaa atcattgacg aattgaccgg
    18901 cgaaaaatct gaccgtttct tattccacta caatttccct ccatactctg tgggcgaaac
    18961 cggtcgtatc ggctcgccaa aacgccgtga aatcggtcac ggtcgtttag caaaacgtgg
    19021 cgtattagcc gtgatgccaa ccgctgaaga gttcccgtat gtagtgcgtg tggtgtctga
    19081 aatcactgaa tctaacggtt cttcttcaat ggcatctgtg tgtggtgcgt ctcttgcgtt
    19141 gatggacgca ggtgtgccaa tcaaagcagc ggttgccggt atcgcaatgg ggctcgtgaa
    19201 agaagacgag aaattcgtgg tactttctga catcttaggt gatgaagacc acttaggcga
    19261 tatggacttt aaagtagcgg gaacccgtac cggtgtgact gcgctgcaaa tggacatcaa
    19321 aatcgaaggg atcacccctg aaattatgcg tattgcctta aaccaagcta aaggtgcaag
    19381 aatgcacatt ttaggtgtaa tggaacaagc cattccggca cctcgtgcag atatttctga
    19441 ctatgcccca cgcattcaca caatgaagat cgatccgaag aaaatcaaag atgtgattgg
    19501 taaaggcggt gcaacaattc gtgctttaac cgaagagacc aatacttcta tcgacattga
    19561 tgatgacggt acggtgaaaa ttgcggcaac tgacggcaat gcagcgaaag cagtaatggc
    19621 tcgtattgaa gagatcgttg ccgaagtgga agtaaaccaa atctacaacg gtaaagtaac
    19681 ccgtgtggtg gacttcggtg cattcgtttc catcttaggt ggcaaagaag gtttagtcca
    19741 catttcacaa atcaccaacg aacgtgttga gcgtgtagcg gactacttaa ccgttggtca
    19801 agaagtacaa gtgaaagtgg tagaaattga ccgtcaagga cgcattcgtc tgacgatgaa
    19861 agacatcaat aataccaacg aggcaaatgc agaagaaact gtagctgaaa atgtggtaga
    19921 aacagaacaa gaaaataatt tctagttcaa taataaaggc gaataacgga ctttgagtgt
    19981 ccgttattca gtttttaatt ttccttaatt gagggatatg ctgtaatggt acaacttttt
    20041 aagttgtttc gaatccgttt cttattactg aatttaattt ctgttttaat gctaagcggc
    20101 tgtaccagtc ggtatgccga tttggtttca attaaaaact tagcattggc agaacttaat
    20161 cctcaacttc gctttgaaca agaggcaatg gtggtaagac tcagccaagt attggaagaa
    20221 gccccattaa cgccctctga gcaagcagac ctctattttg aaagaggcgt tatttacgac
    20281 agtttaggtt tatggtcgtt agcccgttat gattttgctc aagccatttc gctcaatcaa
    20341 cgtatggcgg cagcttataa ctatatgggg ctgtatctgc tgctggaagg cgattacgac
    20401 agttcgattg atgcgtttaa tgccgtattg gaattagatc gggaatatag ctacacctat
    20461 ctcaatcgag gtttggcttt ctattatagc ggcagatatt ctgaagccca gcgtgatctt
    20521 ctccattttt atgaagaaga taagaaagat ccttatcgag cattatggct ctattttaat
    20581 gagctggaat ttacaccaac agaagctaaa aataatttac aaaagcgagc taataatctt
    20641 tcttcggatt actggggaac aaatatcgta aattattttt tagggaagct caatttagct
    20701 caagttcgtg ctataatgga acgtgacgct aaggaaaata gctcacaata tgcagaaata
    20761 ctgacagaaa cgtatttcta cttagcaaaa caacaactca aattagatca taaagatgag
    20821 gcaatcagcc tctttcgtct tgctcttgca aatcaagtgt ttaacttcgt tgagtatcgt
    20881 tttgccctgt ttgagttatc acaaattcgt ggtatgactc aaacgactcc cgttgttgat
    20941 aaagaatagg gaaagattag gacaatacaa gcggttaatt tcgcaaaaaa ttttgtaaat
    21001 ttaaccgctt atactcaggg gatttttaaa gcatcacttg ctttgttatt tcatttcttc
    21061 ctaaatttca acaatataat tttcattaat ggctgtgcag aaaaatagtc gatattttct
    21121 gctttgtgcg ttccaaacaa atggtttttt atgacaactg aatctttaac tttcgccgat
    21181 ttaggcttac ctcaaccaat ccttgatgct gtaaatgaaa tgggctttgt aaacccatca
    21241 cccattcaac aagaatgtat tcctcattta ttagccggtc gtgatgtgct tggtatggca
    21301 caaaccggga gcggtaaaac cgccgcattc tcgctgccgc tgttggcaca aattgaccca
    21361 acacaacgcc acccgcaaat gttggtgatg gcacccaccc gtgagcttgc gattcaagta
    21421 gccgatgctt gtgagcagtt tgcaaaaaat atgaaaggca ttcgtgtagt gacggtttat
    21481 ggtggacaac gttacgacat tcaattacgt gctttaaaac aaggctcaca agtagtagtg
    21541 ggtacacctg ggcgtattct tgaccatatc cgccgtggca cattagattt atccgaatta
    21601 aaattcatcg tgttagatga agccgatgaa atgctgcgta tgggctttat tgacgatgtt
    21661 gaaacggtaa tggctgaatt accggaaaca catcaaactg ctctcttctc tgccaccatg
    21721 ccggagccga ttcgccgtat tacccgtcgt tttatgaaag atccgcaaga ggtaaaaatt
    21781 aaggcaaccg agcgttcagc cccggatatt gaacaaagct actggctggt aaacggcttc
    21841 cgtaaaaacg atgcgttatt gcgtttccta gaagtagaag aatttgatgc tgctatcatc
    21901 tttacccgca ccaaaaccgg tactattgat attaccgaat tgtgtgaacg caacggctac
    21961 cgtactgcgg cattaaacgg cgatatgacc cagcaagccc gtgagcaaac cttagataaa
    22021 ttacgctccg gtcgtttaga tattttagtc gccaccgatg ttgctgcccg tggtattgat
    22081 attgagcgaa tcagcttggt tattaactac gatattccgt tagaagaaga atcttatgtt
    22141 caccgcatcg gacgtaccgg tcgtgccggt cgttcaggtc gtgccttact gtttgttgag
    22201 cctcgtgaac gccgcttatt acgcaatatc gaaaatttaa tcaaaaaacc aattaatgaa
    22261 gtggcgattc caaaccacga aattttaatg gaaaaacgcc gtgagaaatt caaagcccgc
    22321 atttctaagc agttagaaca tcacgattta gaaaaatatc gtgaattgtt ggaagattta
    22381 tttactgcgg atcaagacca cgaagaatta gcagcggcga tgatgatgtt actgcaagaa
    22441 aaacaaaaac tgattctgcc accggatccg gttgtgcgtg ctgcccgttc tgaacgtgga
    22501 cgtgaccgca atgagcgaaa cgatcgtcgt aacggtcgtg aacaccgtga aaacaatggt
    22561 gtggcaatgg atttataccg cattgaattg gggcgtgaag acggtgtgga agttcgtcat
    22621 attgttggag cgattgccaa cgagggggat atcagcagcc gttacatcgg gcatatcaaa
    22681 ctttatgata aatactcaac cattgagttg ccgcaaggaa tgccaaatca tctcgtacaa
    22741 catttcgctc acaaagcacg tgtattaagc aaaccaatgc agatgacatt acttggctct
    22801 gcaaacagtg caagtaatgc aaatccattt gaaggtcgtg gtcgccgtgg taacgatcgt
    22861 aatgatcgtg gtggtcgccg agacgggggt ttcaataaag accgcaaagg tggctttaaa
    22921 gaaaaacgtt tcagtgaaaa acgtggtcgt cgtgactaaa cgacactaag cgaagtaagc
    22981 gatgccccac cctcgtgggg cattttacaa gcggtcaaaa aaactcaatt ttttgcaact
    23041 atgtttatca aaccaaatca aacttcttgt ccacttcaga tctccgagca agacatcgcc
    23101 tttatgcaat acgcccttga tctcgctgat ttagccgaag caaaaggcga aatcccggtt
    23161 ggggcagtac tggttgataa aaaccaacag attatcggca gaggctggaa ccaaaccatt
    23221 caactctgtg atccatctgc acacgctgaa atgcaggcaa ttcgtcaagc aggacaaact
    23281 ttagggaatt accgtctgtt agattgtacc ctttatgtta cgctcgagcc ttgcccaatg
    23341 tgtgccggtg caattttaca tagtcggatt aagcgattgg tttttggggc aagtgattat
    23401 aaaacaggtg cggtaggttc acgctatcat ctgtttgaag attataaaat gaaccatttc
    23461 ttagaagtgc atggcaatgt attgggcaga gaatgtagcc aaaagatcag tgattttttt
    23521 aagcaacgtc gtttgcagaa gaaaggcgac gctttgataa aataaaagca tagataggct
    23581 ttgctactat gcttttattc gattattgac caactgaagc taaaattcga tcggcaaatt
    23641 ttccgatact gataccaagg ttattcgatt tattccaatc cattaaagta cggaaattat
    23701 tagaaactaa aaacgctctt cccgcttctt tatccggacg aatcaaccaa acctctttgc
    23761 cgtgtaattg agctaatttt gccgattctt gtccattcgg ataagctaaa taaataccta
    23821 aggcttgcca ttccgccaat gttttcgctt tgttggtttc aagaccggcg aaacttaaat
    23881 ccatcggtga agctaattta acctcaacac cccaaggtag ttgattatcc caacctactg
    23941 ttgaaagata attggcaatc gaggcaaatg catcggcttc attctcccaa atatcttttt
    24001 taccgtcatt attgccatca gctgcatagg ttaagtaaga agttggcata aattgagttt
    24061 gtcccatcgc tcctgcccaa gatccaagca attcatagcg tttaattgtg ccgtcatcga
    24121 gcattttcat cgcattcaca aattcttgcg taaataactt ctcacggcga ccatcaaagg
    24181 cgagggttgc caacaccgaa agtacatcaa aatccccttg gttacgccca aagctgctct
    24241 ccattcccca aagtgccaaa atatactctt tttgtacccc atatttttgg ctggcatggg
    24301 taagctggct attatattca taccaacgtt cacttgcctg atccaccttc gcttgagtta
    24361 atactttgtt taaaacttgg atttggtggc ggaggcggta cattcgggtc acgtcttcgt
    24421 gcagcttgct gttgatctaa ctgcaccgct ctggcgttgt aatgaatgaa tttctgagca
    24481 tttaaggttt ttgcagacac tcctgcccct gctgccttct gtttcagaaa atgcacataa
    24541 tcattaaaat gactgaccga gcgagattta ctgtatttag catctaagtt taagccggca
    24601 taactttctt gattatcact tgaacaaccg gctaaggcta aagtgataat cgctaaaggt
    24661 aaggtaaaaa ttatcgattt cattcttatt ccgttaagtt aatcattcgg ttaggacgaa
    24721 tcacagtatc attggtgatt tctgccacac cgagaaattg ttcatcttct gaatataaac
    24781 gtaccaaacc ataaagttgg ttcagattat caaatctaat tctctgacca aaacccaccg
    24841 ctttagtttg ctctgaactt aaatttattt ttgctaatgc agaaactgcc gtatccatcg
    24901 gcaataagtg ctggtctaac tctgcaagcg gttgattttc ggctaaattt tgcaaatctg
    24961 catagctcat cattttttca atcggataat ctgccactgc tgtacggcgt agcatcgtaa
    25021 cgtgtgcacc acagcccaac tcttcgccta aatcatcgac caaagttcgg atataagtac
    25081 ctttagaaca atgcacctca agggttaaaa atggagcctt gtattcaatg aaatttagtt
    25141 caaaaatcgt aatcgggcga gcctcacgct ccaccgtaat ccctgctcgg gcatattcat
    25201 acaagggttt gccgttgtgt tttaaggccg aaaacattgt cggcacttgc aaaatatcac
    25261 ctctaaattt ctccaaagca gccaaaattt gagattttgt cactgcaact gctttggttt
    25321 ccaccacttg cccttccgca tctgaagtat cggttcgctc gcctaatttt gcggtgacga
    25381 gataacgttt atccgaatcc aacaaaaatt gcgaaaattt ggtcgcttca cctaaacaga
    25441 tcggcagcat tccggttgcg agagggtcta acgccccggt atgtccggct ttatttgctt
    25501 ggaaaattcg ctttaccttt tgcagaatat cgtttgaaga cattccttgt ggtttatcta
    25561 ataagaaaac gccgtgaata tcacggccac gtttgcgagg tctagacaca attagtcctc
    25621 tttatgtttt tcttcgtcat ttttgattac actagacaca aggttagaca tacgcatacc
    25681 ttcgactagc gattcatcgt agataaaacg cagttcaggc acaatacgca aacgcattgc
    25741 tttacctaaa agggttcgaa tataggggct tgctttctcc aagccttgca taccttgctt
    25801 aatagcttca gcatcgttat caaataagaa agtcacaaaa attttggcat acgccaaatc
    25861 tcttgatact tccacatcag aaacagtcac cataccaatg cgaggatctt ttacctcacg
    25921 ttgtaaaatc accgccactt ctttttgtag ctcctgtgcc acacggtcac tacgtttaaa
    25981 ttctctggac atatttttct cttttatagg ggcgtgatgc ttcacgccct aaaaaataca
    26041 aagggcgtat gcaatacgcc cctacacaaa attaggctaa atagtacgtt ttacttcaac
    26101 cacttcaaac acttcgattt ggtcgccaac ttttacgtcg ttgtagtttt taacgccgat
    26161 accacattcc ataccgttac gcacctcaga tacgtcatct ttgaaacggc ggagagattc
    26221 taactcgcct tcaaaaatta ctacgttatc acgcagaaca cggattgggt tgttacgttt
    26281 aacgatacct tctgtcacca tacaaccggc aatcgcccca aatttcgggt ggcggaacac
    26341 atcgcgcact tctgccaagc cgataatttc ttgtttgaat tcaggctgta acataccgct
    26401 cattgctgct ttcacgtcat ttaatagctc ataaatgatg gagtagtaac gtaaatcgat
    26461 attttcgttt tcaatcacac ggcgggcaga ggcatcggca cgcacgttaa agccgaccat
    26521 aatagcatta gaagctgcgg ctaaggttgc atcagtttcg gtaataccac ctacacctga
    26581 accaacaatt ttcactttca cctcatcggt tgaaagttcc attaaggatt ggctgatcgc
    26641 ttctaccgag ccttgtacgt ctgctttaac aatgatgttc aattctgcca catcaccggc
    26701 tgccatatta ctgaacatat tttccagttt agctttttgc tgacgagcca gttttacttc
    26761 acggaattta ccttggcgat aaagagccac ttctcgggct ttcttctcat cacgcacgac
    26821 ggttgcctca tcaccggcag caggcacgcc tgataagcct aatacttcta ccggaataga
    26881 cggacctgct gattcaacat ctttaccgtt ttcatcacgc attgcacgca cacgtccgta
    26941 ttcaaaacca catagaacaa tgtcgccttt gtttagcgta ccggattgaa ccaagatagt
    27001 tgccacaggg ccacgacctt tatctaagta agattcgatt accacgccgc ttgccatacc
    27061 gtcttttact gcggttaatt caagcacttc ggattgcaga ataatggctt ctagtaaatc
    27121 atcgatcccc ataccttttt tcgcagatac cggcacgaat tgcacatcgc caccgaattt
    27181 ctcagaaata acctcgtgtt gtagtaactc ttgttctaca cggtcagggt tcgcttccgg
    27241 tttatcaatt ttattcaccg ctaccactaa tggcgcaccc gctgctttgg cgtgctggat
    27301 agcttcaata gtttgtggca ttacaccgtc atcagccgca acgacgagaa caacgatgtc
    27361 agttgctttc gcaccacgcg cacgcattga ggtaaaggct gcatgccccg gggtatctaa
    27421 gaaagtgatc atcttgccgt catcggtttc aacgtggtat gcaccaatgt gctgggtaat
    27481 accacctgct tcacctgccg ccactttggc tttacgaatg tagtcaagta acgaggtttt
    27541 accgtggtca acgtggccca taatagtcac taccggtgca cgggttactt tttctgcgtg
    27601 agtatcacga tcttctaaaa ccgcttcttc taactcattt tctttacgca aaatcacttt
    27661 atgcccaagt tcttccgcca ctaattgtgc ggtttcttgg tcgataactt ggttgatcgt
    27721 caccatttca cccattttca tcatcatttt gatgatttca gtcgctttca ctgccatttt
    27781 attagccaat tcagccacag tgatagtttc accaatcacc acatcagctt taacaacttg
    27841 agctggtttg gtaaaggctt gttgtaaagc tgcacctttc ttaccttgtt tacctttgcc
    27901 ttttacttct ttatggttgc gacgatctgc actgcgttcg tttttatcct cttcacgtcc
    27961 gccttttttc gctttagcca cattgccttt gccgttacga ccacgatttc cctcactacg
    28021 gcggtcatta tcacgctcag cctctctagc ataagaagaa gtaaaacgct catcatcaaa
    28081 atcttcgttg ccgttatctt ccgcttcttc acgagcaatt tctgctaaac ggcgggcatt
    28141 ttctgcagca cgttttgcct ccatttccgc tttttgctga gctaattcct cttgcttacg
    28201 gcgtaactca gcttcttctt tgcgtttagc ttctttttca ggatcaaccg ctttctcttg
    28261 ttttggctgt acctgttgtg ctttcggttt ttcttctttt gctttgctgc ttggcattac
    28321 cggcacagaa atcggtttac tagcggtcga ttctgctgct ttttttgcag ctttctcttt
    28381 agcttcagct tcggcttttt ctttggctaa cttttcagct gcttcttttt cagctctagc
    28441 tttcgctgcg gcagcttctt ttgctgcttt ttcttgcaat gcttttgcat caattttcgg
    28501 ttttttctct tttacttcaa ccgcttttac tttaccactg gttgtggttg tattcacttt
    28561 actcgctttg cgagcgccac caagcgaaag tgtttttttc tcttctgtca ttttattatc
    28621 ctctttgctt agttgaacca acaaatttgg cgtgctgcca taattagctc gccagctttc
    28681 tcttctgaaa gttcttcaat atcggctaaa tcatcaacac cttgctctgc aagttcttca
    28741 agagtcgtaa tctgtttttc agctaatttg aatgcgatat ggcgatccat accttcaagc
    28801 gttaataatt tttcttcaat ttgagctgat tttaataact tctcttcttc taacgctttt
    28861 ttcgtgatcg catttttggc acgagattgt aattcttcga ctaaatcttc atcttctaaa
    28921 ccgtcaatcg ccgttaaagt atcaaccggc acataagcaa tcgcttcaag agacgtaaag
    28981 ccctcttcaa ttaaaacttg agcaaattct tcatcaattt ctaaagcaga agttaataaa
    29041 ttgatgactt taccatcttc ttcttcgctc ttcttcgtta gctcttcaac ggtcattaca
    29101 tttaatgccc aaccagttaa ttgtgtcgcc aaacgcacgt tttgaccgtt acgaccgata
    29161 gcttgagcca gatttttcgc ttcaaccgca atatccattg agtgagtttc atcgttaatc
    29221 acaatagagc ttacatctgc cggagccatt gcattaatca caaattgagc cggattttcg
    29281 tcccaaagta cgatatccac acgctcgccg cctaattcat tgctgatagc ttgaacacga
    29341 gcaccacgca tacccacaca agcccctacc gggtcaatac gtttatcgtg ggttttcacg
    29401 gcaatttttg cacgagagcc gacatcacgg gctgaacctt tgatctcaat tacgccttcg
    29461 ccaatttcag gcacttccaa tttgaatagc tcttctaaca tcaccggttt agcacgggta
    29521 acgaaaagct gaggtccttt tgattcaggc ttgatttcgt ataacacacc acgcacacgg
    29581 tcacccgggc ggaagttttc acgtgggatc atatcttcac gcacaatgac cgcttcgcct
    29641 ttgatatctt ctgatttacc ttgtaactca aggaaaatat tatcacgggt tacttttttc
    29701 acagtggcaa gaataatttt gcctaaatcc gaacggaatt catcaatgat tttcgtcttc
    29761 tccgcttcac gaattttggt tttgactacc tgaccaaaag tctgaatcgc cacacgaccg
    29821 aactcgatag actctacttc atcttcaata aaatcgccta attgtacgtt tggatcttca
    29881 aattgtgccg cttctaagct gatttcacgg gtcatattat tcacattttc aaccacagcc
    29941 caacgacgga aagtttggaa atcaccggtt ttacgatcta ccaccacacg cacgtcaata
    30001 tctaaatcac ggctcttttt ggttgcaatg gttaaagcgg tttctaaggc ttcaaaaatt
    30061 gcctcttttg gtaattgctt ttcgtttgaa actgcttccg cagctaataa aatctcttta
    30121 ctcattttgt cagtttacct ttatcttaaa aattaaaaac cggaactaaa tttgcttttt
    30181 gaatattgcc aaatgcgaac tggcgatctt cattttctac cgttaaagtg atgaaatcac
    30241 cttctacttg tttgatttta ccttgccatt tacggcgatc gaacatcgga atgcgtaaat
    30301 gaatcactac atcttgcccg ataaaacgct catagtgggc aacggtaaat aatggacgat
    30361 ctaaccctgg tgaagaaacc tctaagttat atttatcggc aatcggatct tccacatcaa
    30421 aaatcgcact cacttggcgg ctgacatcgc tacaatcatc aatcgtcacg ccaccttctt
    30481 tatcaatata taaacgcacc gttaaaaaac ggcctgcacg ttggcattca atgccgacta
    30541 attcaaagcc taatgcttca atagaatcga gcactaaatc ttctaatttt tgttctaaag
    30601 ttgccaagtc ataatctcca aatataaaaa aagccggata aaccagcttt gatacgttaa
    30661 tgctgtacca atttccgcaa aaaagcccca gacgggaaac cgtggggctt taagcggttt
    30721 gttttttgct gtagcaacca caacaagcgg tcttttttgc caaatttttt gcaaatttgc
    30781 tacagcatat aaaacaaaac tcacaacttt aaccaaagct gtgagcttaa aactggttgc
    30841 gggggccgga tttgaaccaa cgaccttcgg gttatgagcc cgacgagcta ccaagctgct
    30901 ccaccccgcg tctgatgggg tgcattatag cggttctaca caaaaacaca agcatttttt
    30961 aatattttct tgttaattcc tcttgataga acatttttaa tccattttta tcatttatat
    31021 cgctatagag catttgataa tagtagtcat acgccagcac attttgtaca tagcctctgg
    31081 tttcataaaa cgggatactg gcaataaatt catccattgc taactgcccg ttactacgtt
    31141 tcagccactg ctcaacacgc cctgctcctg cattataagc agaggcaatc agaatccgat
    31201 tattcggata tttttcgttt aactccatta aatgggttgt gcctaacata atattgttaa
    31261 acggttgaaa gagatcattg ccatctttga aggttaaacc gttatcttta gcggtttttt
    31321 gtgctgttgt cggtaacagt tgcattagcc ctctcgcatt agcgtgcgat tgagcctgag
    31381 cattccacgc actttcttga cgagcaatcg cctgagcaaa cgttttgctg atttttttat
    31441 cttgcagatg taaatcgaac caatccgaat aggcattcgg taatcgcaaa tcaagataat
    31501 caaaggcttt tgtttgaatt gtaccttcca ccgccaaatc ataccaattt ttatccttgg
    31561 catattttat cagggctaac tggattttag ttggtgtatt ttcacctgct tccggcttga
    31621 tgttttttat ccagtcaatc catatttttc ttgcctggtc aaactgccct agctctcgca
    31681 actcttgaat acgagctaat tggtttgcat acaattcaag ctgtgcttgt gtcaattcag
    31741 gcacttcaag catcgggatt tggtaaacaa tgcctaattg ttgagcagcc aacatagcat
    31801 aaaagcctct ctctttagct aagctttcaa aatcaacttt acgcttcgct tcgtttttct
    31861 cctctttcgc agcccaataa cgccattctg ctttttcttt cgcctgctga gatagcagaa
    31921 ccagccactc atttaaatct gctttttgcc aaattgccat tcgtaaacgg cgttcagtta
    31981 aattgtctgt cttgagcaac ttgatttgct catcacgcca aaattggaat gttggttctg
    32041 ggttatcaaa aaatcgagtg ataaaagcat ttttccagcc attgatttcc tcgctggaaa
    32101 gttgatactt ctctgcccac gtttgatact gctggaaact cgggttctcc atattttccg
    32161 ataaagttcg cacatattta gcaaagagtt gctgaataat cgctttatta tcagcataaa
    32221 atggggaatc aagcggttga ttttcgataa aattttgcaa atctgccgga ttattcgcta
    32281 ccttttcaac ggaagatagc cagattttca aattctcatt atttacattt gccgccaaat
    32341 tcgccaattc tgcatttgca ttttgtttaa ttaattcgac cgctttcaaa cgcatttttt
    32401 catcggtttt aagcccctga tcccgccaat aactttctaa attcgcacaa tcagaagtta
    32461 atttcggcgt agcaagccaa aagcgatcaa actcttgcac caaagcaagc agttctgcat
    32521 tttctgcttt ttgctcagtt acttgagaaa cttccggatt gatttgagct ttacttgctg
    32581 ccagttcata acgagcagaa aataaacggc attggtcggc aagactactc tgttttacat
    32641 tttgagcata ttccagtaac tccggaaatt tctgttcacg atagagcagc tcaaacatca
    32701 agttctgtaa ctgcctttga tacaaagaat caggatattt tgaaataaat gctttaactt
    32761 cactttctgt ggcttgtttt aacgttattt tagcatttag cagcttccat tcagctttca
    32821 tctccaacgg ataacccgct aaggttagta ataaacgctg aattatctgc tccgttgaaa
    32881 gtgataaatt cttctgacta atcgctgcat ctgccaaata attaatttgc tgaaaatttt
    32941 ctctctgttt taaacgcaaa ttttctgcat actgtagctc tttttgataa atcgctaacc
    33001 aatcattttt taattgtttt aattctgttt cagtataact ttttgatggt tctttcccgg
    33061 ttcctaccgc aaaagcatat tggcttgcta aaaatacagc aatcaacgtt ttcttccaca
    33121 ttagtttttc tccttaatcg tgagttttag gcagaaaagt aggaatgaag tttcaaataa
    33181 aatgaagtta tttaaaaact gccagctgat aattgtttaa aactcaacca cctgccagtt
    33241 tcactttgaa acctttctgt tctaagattt gcttaatgaa tcctcgatta tcgccctgga
    33301 tttcaattac tccatcttta aatgagccac cacaacccaa tttacgttta agctctgaag
    33361 caagagaatt taaggcttta tcctctaaat caagaccggt gataaggcaa acacctttcc
    33421 cctttctacc gcttgtttga cgttgaatac gcacaatacc atccccttta gggcgttctt
    33481 cttttattac ttcggacttt attctgcctg tttccgttga atagactaat gtcatttaca
    33541 aatttttcct caaaaataac cgcttgtttg attaaaaaag gcggaaattt ttccgccttc
    33601 attaaaaatg caatgaatta actgatagat tggttaatag attttaatac cgcaagcgga
    33661 tcttgagctt gggtaatagg acgaccaata accaaaaaat ctgagcctgt ttctactgct
    33721 tgtttgggtg tcatcactcg gcgttgatcc ccaaaatctg ttccttttgg ccggattcct
    33781 ggggtcacta atttaaaatc ttgaccacaa tgggtacgta atacctcaac ttcttgtgga
    33841 gaacatacca cgccatctaa accagcccgt tgtgctaaat gtgctaaacg aataacttgt
    33901 tccatcggcg aagcattaat acctatttga agcaaatcca aatcttccat actggttaga
    33961 accgtcactg caattaataa tggtgcctct ttgccataag gctccaaaat tttctttgcc
    34021 tcttccatca tggctaaacc accagaagca tgcaagtcaa ccatccacac accaagatca
    34081 gcagcagaac gtactgctcg agcaaccgta tttggaatat catgatattt taaatcaagg
    34141 aatacatcaa atttacgttc gtgtaattgt ttgacaaaat ttgtgcctaa ggttgtaaac
    34201 atttctttgc ctacttttaa acgacaaagc gacggatcga ccaaatccac aaattctaat
    34261 gcttcacgtt cagtttcata gtctaacgca acaattactt tattgttcat tttcaattcc
    34321 tcagattctt tctttattga ataatacctt cgatactttg taccggctta attttttccc
    34381 attgattaca agaaggacat tgccacatta agcgataact ttgataacca caatttaaac
    34441 agcgatattg gaagctgcgt tttatctgat ttcccaccat attatgtaat aaaactaagc
    34501 tttccttacc atttccttcc tccgcaaaat ctgcttgata gcgaataaag cggtgaaaag
    34561 taattaaatt cggataagta ctcaactgct ggtatagttt agaatgtgca gcattgatac
    34621 catctttttc ttcaataaat tcagttaaag caatatctac actactatta tgttttactc
    34681 ggtttgctcg aatgagaaat aactcatagc catttaagtc ctcaagagcc atatagcttt
    34741 gcttaattcg tccaagcact tcgctaatat aatcagggtc ttgcacaaga atctgttcga
    34801 aatagcttaa tgctcttaga tattctccct cttctaaata gaaatcacct aatattatag
    34861 aagcgcgtgt ggattgagga taatattcta acgctttatt taacgattca ataaatgccg
    34921 ctttatcatc aaatttaacc ccttgcgcat attcacaata aaaatgtgaa agcggtattt
    34981 tatctgcatc cggctctatt cgaagccgtt tttctgtaac attaatcgct tttttccatt
    35041 ctctggtttt ttggtaaata acagcaagct gagataaaga atatttagca aactcaggtt
    35101 catcaactaa tgaaatgtaa taattttctg cacggtcata gaaacctgca accataaagt
    35161 ctttagctaa ttgctgtttt gctaataatt tttgatcaaa tgaataatga gggctattca
    35221 ctaatgtttg gtgaatacgt aaggcacgat ctacctcacc tcttgaacgg aaaagattac
    35281 ctagggttaa ctccgcttca aattgggatt cagatgcaat atgattttcg gattcttgtt
    35341 tttgtaacat agagaggaaa aggtccaccg ccttttcctg ctgattagat aaaagaaaat
    35401 ttaaccccgt aacatactca cgagagaact tattactagc ggtttcttga tccttctttg
    35461 cactacgttg tcccatatac cagccatata gtgctgcaat aggcaataaa aggaacaata
    35521 attcaagcat tgattattca gcctttggag tcgttaattc agttatttgc tgagcttggc
    35581 gctttacacg acgatttaaa gcaacgtttt gaaacttaat ttttaagtaa aaaatacccg
    35641 ttaccaacca accaagaatc aatcctaagc caaataaaat cgcaactaac gttgataagc
    35701 gtaattcact ctgagcaaaa atatagttaa aggtgataag ttgatcatta ttggctccaa
    35761 tcgtaacagc gacaataata actgcaatca caattaaaat acctaaaata tacttaatca
    35821 tataatctcc ttactacgat tattgaatta ataagactta aagcagatca actctctctt
    35881 ttagatcttt accagcttta aaatgtggta catatttcgc gcctaaaaga acactttctc
    35941 ctgttttggg attgcgacct aaacgcggct gccgataatg tagagaaaaa ctaccaaatc
    36001 ctcttacttc tatcctttca ccttcttcta aagtagccgt taactgctct aaaagctctt
    36061 ttacacaatg ctccaccatt ttaattggta aacttggatt tttagatgct aaactctcaa
    36121 ttaattcaga tttagtcata ttatttctac c
//
LOCUS       DANMCL010000013        35395 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.013, whole genome shotgun sequence.
ACCESSION   DANMCL010000013 DANMCL010000000
VERSION     DANMCL010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 35395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35395
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.013"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(113..397)
                     /gene="raiA"
                     /locus_tag="PXF40_000604"
     CDS             complement(113..397)
                     /gene="raiA"
                     /locus_tag="PXF40_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HDL5801977.1"
                     /translation="MSLNISSKQMDITPAIRTHIEERLAKLEKYHTQLINPHFMLIKQ
                     PNSFQVEATIGTPLGDLVAKAEHEDLYTAIFDVKKKLEGQLIKLKEKNEH"
     gene            577..1518
                     /locus_tag="PXF40_000605"
     CDS             577..1518
                     /locus_tag="PXF40_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HDL5801978.1"
                     /translation="MSEKKQLPPFQTQFLHPKYWGLWLGLGVFKLILCLPYPILVKIG
                     LGLGKLFTKLGFGKRRMRIARRNLELCFPHYSAEKVEELVEENMKSVGMAIIETGMAW
                     FWSDKRILKWSKIEGLEHLTQRDQERGILLVGVHFLTLELGARIIGLHHQGVGVYRPN
                     DNPLLDWIQFRGRVRSNKAMLDRKDVRGMIRALKNGEMIWYAPDHDYGRRNSVFVPFF
                     AVEETCTTAGSYMLLRSAPKSLVIPFSPIRNLDYSGYTVKVSPAVDFSQCQNEVETAI
                     LMNRVVEREIMAALTQYMWLHRRFKTRPNEGDQSLYD"
     gene            1614..2501
                     /gene="dapA"
                     /locus_tag="PXF40_000606"
     CDS             1614..2501
                     /gene="dapA"
                     /locus_tag="PXF40_000606"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HDL5801979.1"
                     /translation="MATPLFHGSIVALVTPMTHGEVDYQDLKKLVEYHIQAGSHAIVS
                     VGTTGESTTLSIDENVKVIKKTVEFADGRIPIIAGTGSNATSEAITMTKLLANSGVAG
                     CLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAKIENI
                     VAVKEATGDLSRLPLIKQLAGEDFIFLSGDDATGFESMKLGGQGVISVTNNVAAADMA
                     KMCELALAGQFTEAEEINNRLMALHHDLFVESNPIPVKWAAYKLGLISEPNLRLPLTT
                     LSESAQPVVLKALQQAGLI"
     gene            2771..3997
                     /locus_tag="PXF40_000607"
     CDS             2771..3997
                     /locus_tag="PXF40_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HDL5801980.1"
                     /translation="MAMPSQRFSLTWVLNLFGTAVGAGVLFLPINAGMGGFYPLIIMT
                     LLVGPMTYLAHRGLTRFVLSSKYKGSDITAVVREHFGEQAGKLITLLYFFAIFPILLI
                     YGVGITNTVSSFMENQLHIAPPSRAVLSFMLIAAMIGVMLLSEQVMLKITTCLVYPLV
                     LILLGLSIYLIPQWNTAALQQMPTTGDFLTTLWLTIPVLVFAFNHSPAISSFALSQQK
                     YYQDDKKAEIESAKVLRSTAFILVLFVMFFVFSCVLTLTPEELAQAKVQNISILSYLA
                     NKFDNPIISYFGPLVAFLAIGSSFFGHYLGAREGLEGLVNQMRKEPIDPSKFRKITAI
                     TFLIILWIVATINPSILGFIESLGGPIIAMILFIMPVYAVYKVPALARFKGEFGHLFV
                     LVMGCIAISAIVYGLL"
     gene            4054..5430
                     /locus_tag="PXF40_000608"
     CDS             4054..5430
                     /locus_tag="PXF40_000608"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000626422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HDL5801981.1"
                     /translation="MISVFDMFKVGIGPSSSHTAGPMKAAKEFVDELQNRKFLNKIDR
                     LRVDVYGSLSLTGRGHNTDIAIIMGLMGYLPHNVDIERIEQTIENLKQNKQLIIAESS
                     VEPKVIAFDFYEDMPFHRDFLPRHENGVKFSALSGEELLFQNTYYSIGGGFIVDEANF
                     EQVKNSDLSVPFPYQNAADLLAHCKNNGLPLSSLVWKNELALRSRVEISDYLAMIWNT
                     MEACIERGLNTEGLLPGPLKVVRRASGLRRMLEANSKFNTDPMQIIDWVNMFALAVNE
                     ENAAGGRVVTAPTNGACGIVPAVLAYYQKFIAQLNQDTIERYLLTTSVIGSLYKMNAS
                     ISGAEVGCQGEVGVACSMAAAGLTEIMGGSAEQVCMAAEIAMEHNLGLTCDPVGGQVQ
                     VPCIERNAIASVKAINASRMALRRTSSPQVSLDKVIETMYETGKDMNAKYRETSTGGL
                     AIKILPCD"
     gene            complement(5485..7074)
                     /gene="purH"
                     /locus_tag="PXF40_000609"
     CDS             complement(5485..7074)
                     /gene="purH"
                     /locus_tag="PXF40_000609"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HDL5801982.1"
                     /translation="MAIQQALLSVSDKKGIVEFARGLSARGVKLLSTGGTAKLLAEAG
                     LLVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGTDDEVMNQHGIERIDMVVVNLY
                     PFAQTVANPNCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVNNNDFDAILAEMDQHQ
                     NSLTLETRFNLAIKAFEHTAQYDSMIANYFGQKVPPYQGAEEEDLTQPSGQFPRTLNL
                     NFVRKQTMRYGENSHQNAAFYVENELKEASVSTAKQLQGKALSYNNIADTDAALECVK
                     EFSEPACVIVKHANPCGVALGKNILDAYNRAYQTDPTSAFGGIIAFNRELDGETAQTI
                     ADRQFVEVIIAPTVSASAKEVLATKKNVRVLECGEFSEAVKRLDFKRVNGGLLVQDAD
                     QGSVSIDDLKVVSERKPTEAELKDLLFCWKVAKYVKSNAIVYAKDGQTIGIGAGQMSR
                     VYSAKIAGIKAEDEGLQVVGCVMASDAFFPFRDGIDAAAKVGITCVIHPGGSMRDQEV
                     IDAANEHGMAVVLTGMRHFRH"
     gene            7246..7515
                     /locus_tag="PXF40_000610"
     CDS             7246..7515
                     /locus_tag="PXF40_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HDL5801983.1"
                     /translation="MINHNLADFVFEYFTENNLKAGTLRYRYIKENVIDAYSTRVDDA
                     FQGKGIAGELYNALIAFAQEKGLKIKPSCSYIEVKMQRSHRDLIA"
     gene            complement(7602..9047)
                     /gene="dacB"
                     /locus_tag="PXF40_000611"
     CDS             complement(7602..9047)
                     /gene="dacB"
                     /locus_tag="PXF40_000611"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HDL5801984.1"
                     /translation="MIFKNFTRAFLNKFILSTLLIPSITQAEINTEELLNTLPAGTSV
                     SFIAKNLDTNQIITQYQSDIFMLPASTQKVFTALAAKLTLNDDFRFQTALLTNGKVEN
                     GVLKGNLIARFSGDPELTSGQIYQLMSKLKQQGINKIEGDLILDPSVFASHDKASGWI
                     WNDLTMCFNAPPAAINVDHNCFYVTLNADQPIGEFAKVNVPSAYPVQVFSSAYIVEPK
                     EAPFCQLDVVVHDNNRYQIKGCMARQSQPFGLSFSVQDPTNYGANMLKAQLKSLKIAF
                     NGQVKEPLTAQNGTLLAEHYSEPLPVLLKKMMKKSDNQIADALFRTVANKQHNRPASF
                     QLGSYVIRQLLKTKANIDFKNSVVADGSGLSRHNQVSSRTMLETLEYIAQNEESLKLF
                     ETFPIAGVDGTISGRGSISTEPLAKNLIAKTGSLKGVYNLAGFMKNARGERIAFVQFI
                     NGYSTGELESKTKRAPLNTFENKFYMALFNE"
     gene            9144..9620
                     /gene="greA"
                     /locus_tag="PXF40_000612"
     CDS             9144..9620
                     /gene="greA"
                     /locus_tag="PXF40_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HDL5801985.1"
                     /translation="MKQIPMTVRGAEQLREELDFLKNVRRPQIIDAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVTKMANNGKVIFGATVQLVNADTDEE
                     VTYRIVGDDEANIKEGLISVNSPIARGLIGKEVDDSVSITTPGGKVEFDIVGVEYI"
     gene            complement(9676..10092)
                     /gene="ndk"
                     /locus_tag="PXF40_000613"
     CDS             complement(9676..10092)
                     /gene="ndk"
                     /locus_tag="PXF40_000613"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HDL5801986.1"
                     /translation="MIQQTLSIIKPDATRRNLIGKILAQLEENGLTIKALKKVHLTRE
                     QAEGFYAEHKGKDFFEPLVEFMTSGSIVVSVLEGENAISHYRALMGATNPDNREKGTI
                     RDLYALSMRENSVHGSDSEESAKREIAYFFVPSEIV"
     gene            complement(10102..12180)
                     /gene="metG"
                     /locus_tag="PXF40_000614"
     CDS             complement(10102..12180)
                     /gene="metG"
                     /locus_tag="PXF40_000614"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HDL5801987.1"
                     /translation="MANQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGN
                     EVHFVCADDAHGTPIMLNADKLGITPEQLIEKAKADHEADFASFNISFDNYHSTHSEE
                     NRQITTDIYKTLKANGFIKSKVISQLFDPEKNMFLPDRFVKGTCPKCKAEDQYGDNCE
                     VCASTYSPMDLINPRSAVSGATPVVKESEHFFFDLPSFEGMLKEWTRSGSLQPEIANK
                     MQEWFESGLQQWDISRDAPYFGFEIPDAENKFFYVWLDAPIGYIASFKNLCDRAGIDF
                     DEFWQKDSTTELYHFIGKDIVYFHSLFWPAMLEGSGYRKPTNVFAHGYVTVDGAKMSK
                     SRGTFIQANTYLKHLDPECLRYYYAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLA
                     SRNASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFNKAIRAIMELTDKA
                     NKYIDDKAPWVIAKEEGKEAELQAVCSMGIELFRVLMSYLKPVLPKLAERAEAFLQSE
                     LRWDNIATPLFGHTVAPFKSLFSRLEKKQIDAVIDETKALFAEANKKTENQTKGTQKV
                     EQQAVEKQENIAVEPISPEITIDDFAKLDLRAAKVLNCEAVPKSDKMLRFELDLGDHQ
                     RQVFSGIKAAYPNPEALIGRFVIVIANLAPRKMSFGMSEGMILSAGTGGANLFLLDAD
                     SGVQPGMQVK"
     gene            12392..13363
                     /gene="menC"
                     /locus_tag="PXF40_000615"
     CDS             12392..13363
                     /gene="menC"
                     /locus_tag="PXF40_000615"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HDL5801988.1"
                     /translation="MRQVKLYRYQLPIQTGVVLRKQPLKERQGVLVCLQEQEKVGWGE
                     IAPLPSFSQESLEQAENQAVNWLKAWQKGEPETLEQLFPSVAFGLSCALAELNNELGE
                     QANNQSAVLCYGDLEKLHTAFSQHTNPIGKIKIGLNPEQEGEQANLLLHTFPNLRLRL
                     DANRLWSLEQAVKFAEKIANEHKPRIQFIEEPCQALELSRQFATQTDIAIAWDETVRE
                     ANFLVKKEPNLTAIIIKPTLVGSLEKCVNLIQQAQKQGLVAVISSSLESSLGLTQLAR
                     IAQQYTPNSVPGLDTLNLMQHQLLRDWHDSSLPLVGLESEFVREVVV"
     gene            13608..14309
                     /gene="rsuA"
                     /locus_tag="PXF40_000616"
     CDS             13608..14309
                     /gene="rsuA"
                     /locus_tag="PXF40_000616"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HDL5801989.1"
                     /translation="MRLDKFIAENTGLTRSQAAKVLKSGVVTVNGNIEKSGAAKISQE
                     DEIYYEDQKLEWVEEGQYFMLYKPQGYICSHDDGEYPTVFQFFDYPLMTKLHTAGRLD
                     VDTTGLVLLTDDGKWSHRITSPKHHCEKTYLVTLADPVEDFYAQRLAEGILLRGEKEP
                     TLPAQLEILDDYNVNLTISEGRYHQVKRMFAALGNKVEALHRWRIGDVVLDERLEEGE
                     FRSLTSEEIASFNGK"
     gene            14299..15480
                     /locus_tag="PXF40_000617"
     CDS             14299..15480
                     /locus_tag="PXF40_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HDL5801990.1"
                     /translation="MESRRPSLSFFIILGMMAMLPPLAIDMYLPSFLDIARDLAVSQE
                     KVQTTLAVFTLGFGAGQLFWGPMADSFGRKIIILIGLVGSAIAAYFLTQVQNIETFYL
                     LRLVQGLCAAAPAVVLGALVRDLFERNLFAKLMSVIMIISMLAPLLAPIVGGYIAKYF
                     HWHSIFYVLVAMGILCVVLISWKIPETLAPEKRLPLSFGKTLSNFAILLKHRPTLGYV
                     LIGGLTFAGIFCFLTSGSIVYIGLYGVSQENFGYFFGLNMIVMVTMTAINSKMVVKVG
                     SETMLRIALAMQLLAGIWLALVAIFDLGFWAMAIGIPLYIGMLSTIGSNASAAILEQF
                     PQMAGTANGVAGTARFGVASLVGAGLSHIAVTSAAPMLLAMALCVMLAGVVYYFLCYK
                     R"
     gene            complement(15620..16939)
                     /gene="rlmD"
                     /locus_tag="PXF40_000618"
     CDS             complement(15620..16939)
                     /gene="rlmD"
                     /locus_tag="PXF40_000618"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HDL5801991.1"
                     /translation="MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFI
                     ENALPDEQVEFKVLEEKRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLEL
                     QRKAKQQALFQRLQKLQTHAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNS
                     NQIIPLAHCEVLVEPLANLLPKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGAL
                     SAQDNHNLRQFATQEQLSLFVMTSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNAT
                     LNEKMVEKALEWLELSNQDRVLDLFCGMGNFTLPIAERAKSVVGVEGVEPMVQQAREN
                     AVTSGLKNVEFYQTNLDEPFSDKPWAKEPFNKVLLDPARNGALFCLDHLTSLNPERIV
                     YVSCNPATLVRDAEKLLQLGYRLEKAAMIDMFPHTGHLESISLFLKS"
     gene            17024..18349
                     /locus_tag="PXF40_000619"
     CDS             17024..18349
                     /locus_tag="PXF40_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase
                     family protein"
                     /protein_id="HDL5801992.1"
                     /translation="MISSVWNERYLADKKREQDHRSPFQRDRARLLHSEAFRCLQAKT
                     QIHAVGEDDFYRTRLTHSLEVAQIGSSLREKLLADVEGFQAVCSEQEFAKNMANLTAL
                     LPDHSLVESLCFAHDLGHPPFGHGGEMALNYKMYAFGGFEGNAQSFRIMTQLEPYTET
                     AGMNLTRRTLLGVMKYPALLSQTSPIEPAEMSEARHINLHHFPQSKGIFDDNNHFFEW
                     VLAPLSEKDRRQFCTVQPNQDPKQPNKTQYKSLDCSIMELADDIAYGVHDLEDAIVGG
                     MVTPQSWQNAEKLLAECQSDWVKQRLPEIREKLFSQHRYERKDVIGALVNHFITNVRW
                     KALPEFDEPLLRYNAYLPESVACVLKILKDFVYQYVICDAKTQRVERKGQRILMELFD
                     ILSSDPMRLLPNNVRERWKNAEESKRARVICDYLAGMSDGQAFKLFESL"
     gene            18470..18769
                     /locus_tag="PXF40_000620"
     CDS             18470..18769
                     /locus_tag="PXF40_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5801993.1"
                     /translation="MRFLPSEIYQPRGELVKADRQGNGEFEVEYRVSGNDVRGLAKSA
                     IAHAKRKGFHLVESDIHRDDADLKFKRGDQELDIEIEVKGRNRIEYKADLDLDKN"
     gene            18930..21842
                     /gene="rapA"
                     /locus_tag="PXF40_000621"
     CDS             18930..21842
                     /gene="rapA"
                     /locus_tag="PXF40_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HDL5801994.1"
                     /translation="MFLVGQRWLSESENNLGLGIVTSVDHRTVTINFPAAEEERVYAI
                     AVAPLTRVQFQAGDRINSIDGWQLEVSEVVENQGAVIYLGKRVDNGEEAVLPEMLLDH
                     KISFSKPQDRLFSAQIDRSDRFALRFNALQHQQAQYQSPLRGLRGIRASLIPHQLHIA
                     KEVGQRLAPRVLLADEVGLGKTIEAGMILQQQLFSGRAERVLVLVPESLQHQWLVEML
                     RRFNLKFSLFDEERCSDFDKQDENGDDVSENPFESEALVITSLNWLETSPQRANQVLA
                     ADWDLLIVDEAHHLEWSETESSIGYQLVERLSQQIPAVLLLTATPEQLGQESHFARLA
                     LLDSDRFYDYAEFVQEQAQYKPVADAVSSLLSDKPLSNDEQNAIAELLSEQDTEPMFR
                     AINSKKSDENDRLQARQELISELIDRHGTSRVLFRNTRQGVKGFPHREYHQISLEMPK
                     QYQNALKVMGMMGSVSQSDLLYPEYLFQRMNPNAKWAEFDPRIDWLITFLKNHRDEKV
                     LVICKQADTAIALEQVLREREAIRSAVFHEKMSIVERDKAAAYFAQQEEGAQVLISSS
                     IGSEGRNFQFAKDLVLFNLPDNPDLLEQSIGRLDRIGQKNDIQIYVPCFNLSAQQMLA
                     EWYHKGLNAFEETCPMGTAIFRELGEELQQFLQKPELSAQFDDFVAKTYKRQQYLKAE
                     LEKGQDRLLELNSNGGEAAQQLANDIAKEDNNPQLVNFALSLFDVIGVEQEDLGEQSI
                     VISPTGHMLVPDFPGLSEDGTTITFNRELALMREEVEFLTWDHPMIRNGIDLITSGDI
                     GKSAISLLVNNKLPAGTLLLEALYVVEAQAPKGLNLTRFLPPTPIRVLVDNKGNNIAP
                     QVSFAGLERQLKPVNKQMANKIAKMARADIEKLIKASEKAVEPQVQQVIETAKFEANS
                     KLKAELHRLESLKMVNKNIRADEVEALEQQLNASLAQLETANYRLDSLRVIVSNKA"
     gene            21969..22265
                     /locus_tag="PXF40_000622"
     CDS             21969..22265
                     /locus_tag="PXF40_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5801995.1"
                     /translation="MYIDLQYAVPLLFEYDPNKSQINLAKYGIDFEQAKLLWEDERKV
                     VLEACIEPELRYFLIGKIYDKYWTAFFTPRNDVIRLISVRRSRKKEISYYEKYH"
     gene            22249..22491
                     /locus_tag="PXF40_000623"
     CDS             22249..22491
                     /locus_tag="PXF40_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HDL5801996.1"
                     /translation="MRNTISAEELERIFDEGKEDILQYCDLSTAHRPGQMKRVNVDFP
                     NWMVEALDKQARHLGVPRQALIKMWIAEKLPVQSPR"
     gene            22503..23171
                     /gene="rluA"
                     /locus_tag="PXF40_000624"
     CDS             22503..23171
                     /gene="rluA"
                     /locus_tag="PXF40_000624"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HDL5801997.1"
                     /translation="MALIEYNPPLEPFLDEVYRDNHILVINKPSGLLSVPGNRPEYYD
                     SAMTRVQQKYGFTEPAHRLDMATSGILLFALSKAAEKELKRQFREREPKKHYIALLWG
                     KLGEKVGDKGEMNFPLICDWENRPRQKICYERGKKAITHYEVLAHYPNNIARVKLTPI
                     TGRSHQLRVHSLALGHPIIGDKFYANPLAKSLSPRLCLHAESLTITHPITRELMTFTA
                     EPTF"
     gene            complement(23149..23724)
                     /gene="ampD"
                     /locus_tag="PXF40_000625"
     CDS             complement(23149..23724)
                     /gene="ampD"
                     /locus_tag="PXF40_000625"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HDL5801998.1"
                     /translation="MPNLKIEQGCLTGQKQVPSPHFSQRPDQEDISLLVIHYISLPPE
                     EFGGNFIDLFFQGKLEPTAHPYFEEIKDLRVSAHCLINREGEITQYVNFNDMAWHAGV
                     SCFEGREKCNEYSIGIELEGSNNQPFTQAQYQSLANLTKAIQQSYPQITDERITGHCH
                     IAPERKIDPGQYFDWAYYKHLLNEAKKSAQQ"
     gene            23784..24626
                     /locus_tag="PXF40_000626"
     CDS             23784..24626
                     /locus_tag="PXF40_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HDL5801999.1"
                     /translation="MLSYRHSFHAGNHADVLKHIVQLLILRALKEKEKGFLYLDTHSG
                     VGRYSLLSFESEKTGEYLEGVARLWERDDLPEEVAFYIDELKKLNRGGKLKYYAGSPL
                     LAVQQLREQDRAILTELHPNDFPLLRQEFAKAKNVQTKRENGFQQLKSALPPKERRGF
                     VLIDPPYELKEDYELVVKAIEEGYKRFATGVYAIWYPVVLRQHTKRIVRGLMDTGIRK
                     ILQIELAVRPDSDQRGMTASGMIVINPPWQLETQMKKILPYLTEVLVPEGTGSWKVEW
                     ITPE"
     gene            24749..25390
                     /gene="pyrE"
                     /locus_tag="PXF40_000627"
     CDS             24749..25390
                     /gene="pyrE"
                     /locus_tag="PXF40_000627"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HDL5802000.1"
                     /translation="MQQYKHDFIEFALSRNVLKFGEFTLKSGRISPYFFNAGLFNTGR
                     DLAKLGEYYAKAIQASGIEYDVLFGPAYKGIPIATTVAVALANLFDVDKPCCFNRKEA
                     KDHGEGGNLIGSPLTGKILLVDDVITAGTAIRESMEIINANNAQLAGVLIALNRKEKG
                     KGELSAIQEVERDYGCQVFSIVDFDDLVAFIETSPQYAPYLPKMREYREKYGV"
     gene            25564..26653
                     /locus_tag="PXF40_000628"
                     /pseudo
     CDS             25564..26653
                     /locus_tag="PXF40_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607068.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
     gene            complement(26718..27908)
                     /gene="metC"
                     /locus_tag="PXF40_000629"
     CDS             complement(26718..27908)
                     /gene="metC"
                     /locus_tag="PXF40_000629"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HDL5802001.1"
                     /translation="MSNYKNLSTKLVHTGRKKRNTQGAVNPVIQRASSLVFETLEEKK
                     HATQNRYKGALFYGRRGTLTHFSLQEAMCELEGGAGCYLYPCGAAAVTNAILAFVEQG
                     NHVLMTGAAYEPTQEFCNALLKRMGVSTTYYDPMIGEGLKALVQPNTKVLFLESPSSL
                     TMEVPDIPTLVRVAREINPEIVIMIDNTWSAGVLFPALEYGIDISIQAGTKYLVGHSD
                     VMIGTAVSNARCWDKLREGSYLMGQMVDADSAYITARGLRTLGIRLKQHEQSSIAVAN
                     WLAQRPEVKAVYHPALESCPGHEFFKRDFLGSSGLFSFELCEKLSNDKLANFLEHFEL
                     FSMAYSWGGFESLILANQPEEIAKIRPAIERKLTGTLIRIHVGLEAVEDLIADLEQGF
                     NRIR"
     gene            complement(27967..28506)
                     /gene="dsbB"
                     /locus_tag="PXF40_000630"
     CDS             complement(27967..28506)
                     /gene="dsbB"
                     /locus_tag="PXF40_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HDL5802002.1"
                     /translation="MLYFFKNLSQSRSAWFLLMLSCLILEGTALYFQHGMGLVPCVMC
                     IYERVALFGILFAGILGFLGNRYAIIRYLAILIWLGSAFKGLVLSIKHHDYQVNPSPW
                     NQCEFKVNFPQTLPLDQWLPQVFAPGPVNCSQSQWEMFGFSMAQWLIFTFAVYLIVAV
                     IVLISQFKRSRQRNNFMFR"
     gene            complement(28569..30110)
                     /gene="nhaB"
                     /locus_tag="PXF40_000631"
     CDS             complement(28569..30110)
                     /gene="nhaB"
                     /locus_tag="PXF40_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proton antiporter NhaB"
                     /protein_id="HDL5802003.1"
                     /translation="MSSIDALFKSFLGKSPEWYKLCILAFLIINPLIYFFINPFVAGW
                     FLVAEFIFTLSMALKCYPLQPGGLLAIEAVVIGMTNPHHIKEEIMANFDVILLLMFMV
                     AGIYFMKQLLLYIFTKLLVAIHSKKILSLSFCLSAAFLSAFLDALTVIAVIISVGTGF
                     YGVYHKVASGNNFEDSTDITNDEKIISNKEILEQFRGFLRSLLMHAGIGSALGGVMTM
                     VGEPQNLIIASQAEWGFIEFLLRALPVSLPVLICGIATCFLVEKYKLFGYGDRLPSKV
                     WGVLARYSQLKEQKMTKQDRLKMLVQAIAGIWLIIGLALHLADVGIIGLTIIIICTAF
                     CGITDEHTLGKAFQESMPFTALLIVFFSVVAVIIDLKLFEPIIAFVLSAEPHSQLSLF
                     YIFNGLLSMISDNVFVGTVYINEAKTALDAGIIDREQFDLIAVAINTGTNLPSVATPN
                     GQAAFLFLLTSSFAPLIKLSYGRMVYMALPYTIVLSIVGFLGLEFLLPSMTEVMINWG
                     WFITR"
     gene            30267..30992
                     /gene="fadR"
                     /locus_tag="PXF40_000632"
     CDS             30267..30992
                     /gene="fadR"
                     /locus_tag="PXF40_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HDL5802004.1"
                     /translation="MGHSDILKAQSPAALAEEYIVKSIWNNHFPAGSDLPAERELAER
                     IGVTRTTLREVLQRLAREGWLSIQHGKPTRVNDIWETSGPNIIGTIIKLDKSYLPVVI
                     ANVVSLRTRMAEAYIPEAIYLAPEESAKLFDGLDELENTAAAYAEFDYKLFRQFTFLA
                     NKPVYALILNSFKSMYHQVAKIFFADENNRQLTLSFYRSLLCTCLAKDSEKAAACMAK
                     NRQSSGEIWQKLSANIPESFGQL"
     gene            31007..32077
                     /locus_tag="PXF40_000633"
     CDS             31007..32077
                     /locus_tag="PXF40_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HDL5802005.1"
                     /translation="MNEIIFSLEPQDNARLQSLCGAFDEHLALIEKSFNLIIARTGFN
                     FTIQSEDDNHYSATLVQNSVKLIKQLYNETAPIKGKIKELDLEDIHLAIQESRMLLQN
                     QWQAGSQGEIAIKTKRGVIKPRSEHQQAYLRNILSHDISFGIGPAGTGKTFLAVAAAV
                     ESLERQEIRRILLTRPAVEAGEKLGFLPGDLGQKIEPYLRPLYDALFEMLGFEKAQKL
                     MERGVIEIAPLAYMRGRTLNDAFIILDESQNTTTEQMKMFLTRIGFNSKAVITGDITQ
                     VDLPRSQKSGLKHAMEVLKEVPELSFNFFDSKDIVRHPVVAKIVQAYDAWEAVDEERK
                     EQRKLEKLALEQEKILAQAEML"
     gene            complement(32203..34209)
                     /gene="tkt"
                     /locus_tag="PXF40_000634"
     CDS             complement(32203..34209)
                     /gene="tkt"
                     /locus_tag="PXF40_000634"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HDL5802006.1"
                     /translation="MTERKVLANAIRFLSMDAVQKANSGHPGAPMGMADIAEVLWRDF
                     LKHNPTNPKWADRDRFVLSNGHGSMLIYSLLHLTGYDLSIEDLKQFRQLHSKTPGHPE
                     YGYAPGVETTTGPLGQGITNAVGIAIAEKTLAAQFNREGHKIVDHYTYAFLGDGCLME
                     GISHEACSLAGTLGLGKLIAFYDDNNISIDGHVDGWFTDDTAQRFESYGWQVIRNVDG
                     HNPEQIKFAIENAQAETERPTLIICKTIIGYGSPNKSNSHDCHGAPLGDAEIQAAREF
                     LGWEHAPFVIPAEIYTEWDAKAKGTLAEKDWNAKFAAYEAAYPELAAEFKRRYAGELP
                     ANWEAESKAFIEKLQANPATIASRKASQNAIEAYAPILPEFLGGSADLASSNLTLWSG
                     SKPIRAEHNVDGNYINYGVREFGMSAIMNGIALHGGFIPYGATFLMFYEYAHNAVRMA
                     ALMKQRALFVYTHDSIGLGEDGPTHQPVEQTASLRQIPNLETWRPADQVESAVAWKAA
                     VERKDGPTALIFTRQNLAQQQRTAEQLANISRGGYILRECCEKGSCPDLILIATGSEV
                     DLAMKAADVLDAEGVKVRVVSMPSTNVFDKQDEAYRESVLPRSVTKRVAIEAQLADFW
                     YKYVGFDGRIVGMNSFGESAPADQLFKLFGFTVENVVAKAKEIL"
     gene            34567..34779
                     /gene="rpmE"
                     /locus_tag="PXF40_000635"
     CDS             34567..34779
                     /gene="rpmE"
                     /locus_tag="PXF40_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HDL5802007.1"
                     /translation="MKQGIHPEYKEITATCSCGNVVKTRSTVGKDLNLDVCGNCHPFY
                     TGKQRVVDTGGRVERFNKRFSIPSSK"
     gene            complement(34834..>35395)
                     /locus_tag="PXF40_000636"
     CDS             complement(34834..>35395)
                     /locus_tag="PXF40_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HDL5802008.1"
                     /translation="NQVNYNLNIPNELSSFANTLWQEKKIRLLLNPQGSMREISTQEL
                     SELLSMIDKRYVQHISCLLTNTTNSAEYLSKIKAPFEISLAPNSDILGYCALVNSADI
                     VIAVDGGGVHISCALGKKLLSFYANHPANIARWYPKPKKDVETFMVIADKWTEDNNDT
                     RGFSLVAPAKWLNHQFAKLIEKYTAC"
BASE COUNT        10326 a         6857 c         7794 g        10418 t
ORIGIN      
        1 ggtatatttt tgcgaaaaat acggtaaatt ttaccgctta ctcttggaat aaaaaatagg
       61 gctaaatgat atctctcatt tagcccttat tattagatgt aaagtttaaa catcaatgtt
      121 catttttctc ttttagttta attaactgac cttctaattt cttcttaaca tcaaaaattg
      181 cagtatataa atcttcatgt tcagctttag cgactaaatc acctaaaggg gtgccaattg
      241 ttgcttcaac ttggaatgag ttaggttgtt ttatcagcat aaaatgtggg tttatcaatt
      301 gggtgtggta tttttctaac ttagctaaac gctcctcaat atgagtacgg attgcagggg
      361 taatgtccat ttgtttgctt gaaatattta atgacataac attttcctct tgtttagtta
      421 aggcttttgc cgttgatatt ctaataacca aaatatgctc atcactccaa aaattcaagt
      481 gaaaaatgaa ataagtttcc aaaaatttga tctacttaac acttttagca gtttttagct
      541 ataatgtaat cataatctag tatgtgagaa taattaatga gtgagaaaaa acagttacct
      601 ccattccaga cacaattttt acaccctaaa tattggggat tgtggctcgg tttaggtgtt
      661 tttaagttaa ttttatgttt gccttatcct attttagtaa aaattggtct gggactaggt
      721 aaattgttta ctaaattggg ttttggtaaa cgtcgtatgc gtattgctcg ccgtaattta
      781 gagctctgtt ttccccatta ctctgctgag aaagtagagg aattagtcga agaaaatatg
      841 aaatcggttg gaatggcgat tattgaaact ggtatggctt ggttttggtc ggataaacgt
      901 attcttaaat ggtctaaaat cgaagggcta gagcatttaa cacagcgtga tcaggaaagg
      961 ggtattttac ttgtaggggt gcattttctg actttagaac tcggtgcaag aattattggg
     1021 ctacatcatc aaggagtagg ggtttatcga ccgaatgata atccattatt agattggata
     1081 cagtttcgag gacgtgttcg ctcaaataaa gcgatgttag atcgtaaaga tgtgcgtgga
     1141 atgattcgag ctttaaaaaa tggcgagatg atatggtacg cgcctgatca cgattatgga
     1201 agacgaaata gcgtttttgt accatttttt gcagtggagg aaacttgtac tactgcgggt
     1261 agttatatgt tacttcgttc tgccccaaag agtttagtga tcccgtttag cccgattcga
     1321 aatttggact attcaggcta cacagtaaaa gtcagtcctg ccgttgattt tagtcaatgt
     1381 caaaatgaag ttgaaacggc tattttaatg aatcgggtgg tagaacgtga aattatggct
     1441 gcgctaactc aatatatgtg gctacatcgc cgttttaaaa ctcgcccaaa tgaaggtgat
     1501 caaagcctat atgattaatt ttaaataatt tcaaaaaagt gcttgcatat ttaagctgaa
     1561 ttttgcaatc tagcaatgtt atcaagcata ataaaaaaat acaggagatg attatggcga
     1621 cccctttatt tcacggtagt atcgtagcat tagttacacc aatgactcat ggtgaggtag
     1681 attatcagga tttaaaaaaa ttagttgagt atcatattca agcaggttct cacgctattg
     1741 tatctgttgg tacaacaggt gaatctacca cattaagcat tgatgaaaat gttaaggtga
     1801 ttaagaaaac ggttgaattt gctgatggac gtattccaat tattgcagga actggttcta
     1861 atgcgaccag tgaagctatc actatgacta aattattagc aaacagtggt gtagctggtt
     1921 gtttaagtgt agtgccttat tacaacaagc caacgcaaga ggggatgtac ttacactaca
     1981 aagcgattgc agaaagtaca gatttaccac aaattctgta taatgtgccg gggcgaacag
     2041 ggagtgattt aaaacctgaa acaatcggtc gcttagcgaa aattgagaat attgttgctg
     2101 tgaaagaagc aacgggtgat ttaagccgct tacctttaat taagcaatta gccggtgaag
     2161 attttatttt cttaagtggt gatgatgcta ccggttttga gtctatgaaa ttaggtggtc
     2221 aaggggtgat ctcggtcacc aataatgttg ctgctgctga tatggcaaaa atgtgtgagt
     2281 tagctcttgc cggtcaattt actgaagcag aagaaattaa taaccgctta atggcgttac
     2341 accatgactt atttgtcgaa tctaacccga ttccggtgaa atgggctgct tataaattag
     2401 gtttaattag tgagcctaat ttacgtttac cgcttaccac actgtctgaa tcagcacagc
     2461 ctgtagtgtt aaaagcatta caacaagcgg gcttaattta gttatttttt gcaaatcaaa
     2521 tttgaaaccg gttaagttaa ttctaaccgg ttttttcata tctaaaagaa atttccacat
     2581 aaaaataaaa ttctaaattt ctttgattta agtaaaattt aattttgttt gatggatttt
     2641 tactcgccaa aaacactatt ttttctgctt ttaatagttt gatcaaaaaa tacgtaaaat
     2701 cttgttgtgt tactgtttcc catcgctaat atagcatagc ttgttagata attctttaaa
     2761 ggagattact atggctatgc catctcaacg tttttctctt acttgggtac taaatttatt
     2821 tggtactgcg gtaggagccg gcgttttatt tttgccaatt aatgcaggta tgggtgggtt
     2881 ctacccactt attattatga ctttgttagt tggaccaatg acatatttag ctcaccgtgg
     2941 cttaacacgt tttgtgcttt cttcaaaata caaagggagc gatattacgg ctgttgttcg
     3001 tgaacatttt ggtgaacagg ccggtaaatt gatcacgcta ctgtacttct ttgccatttt
     3061 tccgatttta ctgatttatg gtgtaggtat taccaatacc gtgagttctt ttatggagaa
     3121 tcagcttcat atcgcgccac catctagggc tgtattatcg tttatgctaa tagctgctat
     3181 gatcggagta atgttattaa gtgagcaagt catgttaaaa atcacaactt gtcttgtgta
     3241 tccattagtg ttgattttat tgggcttatc tatttattta attccacagt ggaatacagc
     3301 tgccttacag caaatgccaa ctacaggaga cttccttact acactttggc tgactattcc
     3361 tgttttagtc tttgctttta accattcacc ggctatttct tcttttgcac tttctcaaca
     3421 gaaatattac caagatgaca agaaggctga aattgaatca gctaaagtat tacgttctac
     3481 cgcctttatc ttggtgttat ttgtgatgtt ctttgtattt agctgtgtat taactttgac
     3541 acctgaagaa ttagcacaag ctaaagtgca aaatatttcg attctttctt accttgcgaa
     3601 taaatttgat aatccgatta tttcctattt tggaccgttg gttgcttttt tggcgattgg
     3661 tagctctttc tttgggcatt atttaggtgc gcgcgagggg ttagaaggat tggttaatca
     3721 aatgcgtaaa gagccgattg atccaagcaa attccgcaaa attaccgcta ttactttttt
     3781 gatcatttta tggattgttg cgactatcaa tccaagcatt ttaggcttca ttgaaagcct
     3841 tggtgggccg attattgcga tgatcttgtt tattatgcct gtctatgccg tatataaagt
     3901 accggcactt gcacgtttta aaggtgaatt tggccattta tttgtgcttg ttatgggttg
     3961 tattgctatt tcagcaatag tatatgggtt actgtaatct ttctaaaatc aatgtagaat
     4021 acgccctttt attttctatg tgaatttgtg tttatgatta gtgtatttga tatgtttaaa
     4081 gtagggattg ggccttccag ttcccatact gcggggccga tgaaagcggc aaaggaattt
     4141 gtcgatgaat tacaaaatcg caaattttta aacaaaattg accgcttgcg ggtagatgtc
     4201 tatggttcat tatcactcac cgggcgagga cataatacgg atattgccat cataatggga
     4261 ttaatggggt atttgcctca taatgtggat attgaacgta ttgagcagac gattgaaaat
     4321 ctaaaacaaa ataagcaact tatcattgct gaaagcagtg ttgagcctaa agtgattgcg
     4381 ttcgattttt atgaggatat gccatttcat cgagatttct tacctcggca cgaaaatggt
     4441 gtgaaattta gtgccttgag cggtgaagag ttgctatttc aaaacaccta ttattctatt
     4501 ggtggtggct ttattgttga tgaagctaac tttgagcaag ttaaaaattc agatctttct
     4561 gttccattcc catatcagaa tgcagcagat ttacttgcac attgtaagaa taacgggtta
     4621 ccgctttctt ctttagtctg gaaaaatgag cttgctttac gcagtagagt agaaatttcg
     4681 gattatttgg caatgatttg gaatacaatg gaagcctgta ttgagcgtgg tttgaatacg
     4741 gaagggttac tacccgggcc tctgaaagtg gtacgccgtg ccagtgggct acgcagaatg
     4801 ttagaggcaa acagtaaatt caataccgac ccaatgcaaa ttatcgattg ggtgaatatg
     4861 tttgcccttg ccgtgaatga agaaaatgcg gcaggtgggc gagtagtcac cgcacctacc
     4921 aatggagcct gtggtattgt tccggctgtg ttggcgtact accaaaaatt tattgcacag
     4981 cttaatcaag atactattga gcgttattta ttgactacca gtgtgattgg ttcgttatac
     5041 aaaatgaatg cctctatttc cggtgctgaa gtaggttgcc aaggggaagt tggtgttgct
     5101 tgttcaatgg cggcagcagg tttaacggaa attatgggtg gcagtgctga acaggtgtgt
     5161 atggctgcag aaattgcaat ggagcacaat ttaggcctaa cttgtgaccc tgttggcgga
     5221 caagtgcaag tgccttgtat tgaaagaaat gcaatcgctt cagtcaaagc gattaatgcc
     5281 agcagaatgg cactacgccg tacttcttcg cctcaggtaa gtttagataa agtcattgaa
     5341 acaatgtacg aaaccggcaa agatatgaat gcaaaatacc gtgaaacctc aaccggtggc
     5401 ttagcaatca aaattttacc ttgtgattaa ttaatgaaaa aggctacctt atcaaaataa
     5461 ggtagccttt tagtttgtag aacattaatg acggaaatgc ctcattccgg ttagtaccac
     5521 tgccataccg tgttcgttgg cggcatcaat cacttcttga tcacgcattg aaccacctgg
     5581 gtgaatcaca caagtaatcc ctacttttgc agcagcgtca ataccatcac ggaacgggaa
     5641 gaacgcatcg gaagccatta cacaacccac aacttgtaag ccctcgtctt ccgctttaat
     5701 acctgcaatt tttgcggaat aaacacggct catctgccct gcaccgatac cgatagtttg
     5761 cccgtctttg gcatacacaa tcgcattcga tttcacatat ttcgccactt tccagcagaa
     5821 caataggtct tttagctcag cttcagttgg tttacgctct gaaaccacct ttaaatcgtc
     5881 aatagataca gagccttggt cggcatcttg cactaataat ccgccgttta cccgtttgaa
     5941 atctaagcgt tttacagctt ctgagaactc gccacattca agcacacgca cgtttttctt
     6001 agtggctaac acttctttgg cagaagcaga aacggttggt gcaataatca cttcaacaaa
     6061 ttgacggtct gcgatggttt gagcagtttc gccgtctaat tcacggttaa aggcaataat
     6121 gccaccgaaa gcagaagttg gatcggtttg gtaagcacgg ttgtaggcat ctaaaatatt
     6181 tttacccaaa gcaacaccac aagggttagc gtgttttaca atcacacaag caggctcgct
     6241 aaattctttc acgcattcaa gagccgcatc ggtatctgca atattattat acgaaagggc
     6301 tttaccttgt aactgtttgg cggtggaaac agaggcttct tttaactcat tttcgacata
     6361 gaatgcagcg ttttgatgcg aattttcgcc ataacgcatc gtttgtttac gcacaaaatt
     6421 gaggtttaag gtgcgaggga attgtccact tggttgggtt aaatcttctt cctcagcccc
     6481 ttgataaggc ggcacttttt gcccgaaata gttggcaatc attgaatcgt attgtgcggt
     6541 atgctcaaac gctttaatag caagattaaa acgggtttct aaagttaaac tgttttgatg
     6601 ttgatccatt tcggcaagaa tagcatcaaa atcattgtta ttgaccacaa tcgccacatc
     6661 tttatgattt ttcgctgcag aacgcaccat tgtcggacca ccgatatcaa tattttccac
     6721 cgcatcttca aggctacaat ttggattggc aacggtttga gcaaaagggt agaggtttac
     6781 taccaccata tcaattcgtt caatgccgtg ttggttcatc acttcatcat cagtaccacg
     6841 gcgacctaga attccgccgt gcactttcgg gtgcagggtt tttacacgcc cgtccatcat
     6901 ttcaggaaag ccggtgtaat ctgatacttc tgttactagc aaaccggctt cagccagtaa
     6961 ttttgcggtt ccgcccgtag aaagtaattt taccccacga gccgatagcc cacgagcaaa
     7021 ttcgacaatg ccttttttat cagacacact taataacgcc tgttgaatcg ccattcttaa
     7081 attccttaaa atgagtgtta acgtgaaaat aaacggcaaa gattataacg caaacgtttg
     7141 cttttttcat ctacaagtgg tcgattttgc aaatttttct gcaaaatcga ccgcttgcac
     7201 tcgtgattaa agcgggtaga atagaggaaa aaaatcggag gaactatgat taaccacaat
     7261 ttagcagatt tcgtatttga gtattttacc gaaaacaacc taaaagcagg cacactacgt
     7321 tatcgctaca taaaagagaa cgtgattgat gcttacagta cccgagtaga tgatgccttt
     7381 caaggtaaag gtattgcagg agagctttac aatgctttaa ttgcgtttgc gcaagaaaaa
     7441 gggctgaaaa tcaagccaag ttgtagttat attgaggtaa aaatgcaacg aagtcatcga
     7501 gatttaattg cttagagagg agcaagcggt cgtaaaattt caaaaattta cgaccgctgt
     7561 cttattcaat tctcaaaaat ccatcacaca aaatataagc cctattcatt aaacaacgcc
     7621 atataaaact tattttcaaa tgtattaagc ggagcccgtt tggttttgct ttcgagctcg
     7681 ccggtggaat agccgttaat aaattgcaca aaagcgatgc gttcgccacg ggcgtttttc
     7741 ataaagccgg caaggttgta aacccctttc agtgagccgg ttttggcaat cagatttttg
     7801 gcaagcggtt ctgttgaaat agagcctctg ccggaaatag taccgtccac gcctgcaatc
     7861 gggaaggttt caaacagttt taagctttct tcgttttgag cgatatattc aagggtctcc
     7921 agcattgttc ggctgctgac ttgattatga cgggaaagcc ctgagccatc agccaccacg
     7981 ctgtttttaa aatcaatatt ggctttggtt tttaataact ggcgaatcac ataactacct
     8041 aattggaacg atgcggggcg gttgtgttgc ttgttggcaa cggttctaaa cagggcatcg
     8101 gcaatttggt tatccgattt tttcatcatt tttttcaata ataccggcaa cggctcggaa
     8161 taatgctcgg caagtagcgt gccgttttgg gcagtaagtg gctcttttac ttgcccgtta
     8221 aaggcaattt tcaggctttt taactgggct ttaagcatat ttgccccgta attagttggg
     8281 tcttgcaccg aaaaacttaa gccgaacggt tgagactggc gagccataca gcctttgatt
     8341 tggtagcggt tgttatcgtg aaccaccaca tcaagctggc aaaacggagc ttctttcggc
     8401 tcgacaatat aagcagagct aaacacctgc accggataag cggacggcac attcacttta
     8461 gcaaattcgc caatgggttg gtcggcattt aaggtgacat aaaaacagtt gtgatccaca
     8521 ttaattgccg ccggtggggc gttaaagcac atcgtcaagt cgttccaaat ccaaccggag
     8581 gctttgtcgt ggctggcgaa aaccgacggg tctagaatta aatccccctc aattttattg
     8641 ataccttgtt gctttaattt gctcattaat tgataaattt gaccgcttgt aagctcaggg
     8701 tcgccactaa aacgggcaat taaattgcct tttaacactc cgttttctac ttttccgttg
     8761 gttaaaaggg cagtttgaaa gcggaaatca tcgtttaaag ttaattttgc tgccagtgcc
     8821 gtaaagactt tttgggtact ggcaggtagc ataaaaatat cactttggta ttgggtgatg
     8881 atttggttag tgtctaaatt tttagcaata aaactaacag aagtaccggc aggcaaggta
     8941 tttaataatt cttcggtatt aatttcagcc tgtgtaatgc ttggaatcag aagtgtagat
     9001 aagataaatt tatttaaaaa agcacgagtg aaatttttaa aaatcataat aaaaggggag
     9061 ttgaaatttt tagtgagaaa ttgaataata gccctttcgt tttaattcgt aaaccgataa
     9121 tttttagtaa ggaaatagat ttaatgaaac aaattcctat gacggtgcgt ggtgcagagc
     9181 aactgcgtga agaattggat tttttaaaaa atgtgcgtcg cccacaaatt attgatgcga
     9241 ttgcagaagc ccgtgaacac ggtgatttaa aagagaacgc ggagtatcac gcagcccgtg
     9301 aacaacaagg tttctgtgag gggcgtattc aagaaattga aggcaaatta ggcaatgctc
     9361 aaattattga cgtcactaaa atggcaaaca acggcaaagt gatttttggg gcaacggtgc
     9421 agttagtgaa tgctgataca gatgaagaag tcacttaccg cattgtgggt gatgatgaag
     9481 ccaatattaa agagggctta atttcagtta attccccgat tgctcgtggt ttaatcggca
     9541 aagaggtgga cgattcagtc agcattacca caccgggtgg caaagttgag tttgacattg
     9601 ttggcgtaga atatatttaa tctacgctag ggcgaattac aatagtgggg cgaaaaaatt
     9661 ttcgccccta ctttattaaa caatctcact cggtacaaag aagtaggcaa tttcacgttt
     9721 tgccgactct tcggaatctg aaccgtgtac cgaattttca cgcatactta aggcatataa
     9781 atcgcgaatg gtgccttttt cacggttatc cggattggtt gcccccatta atgcacgata
     9841 atggctaatt gcattttccc cttccagtac agaaacgaca atagatcctg atgtcataaa
     9901 ttccactaac ggctcaaaga aatctttgcc tttgtgttcc gcataaaatc cttccgcttg
     9961 ctcacgggta agatgtactt tttttagagc tttgatagtc agcccgtttt cttccaattg
    10021 agccaaaatt ttgccgatta aattacggcg tgtagcatcc ggcttaataa tagaaagcgt
    10081 ttgttgaatc atcatcttct cctatttaac ttgcattccc ggctgaacac cgctgtctgc
    10141 atctaataag aacaggttcg caccgcctgt gccggcagat aaaatcattc cctccgacat
    10201 accgaacgac attttgcgtg gagcaaggtt ggcaattaca atcacaaaac gcccgataag
    10261 tgcttccgga tttgggtagg ccgccttaat gcctgagaat acttggcgtt ggtggtcgcc
    10321 taaatccagc tcaaaacgta acattttgtc tgattttggc acagcctcgc agttcaatac
    10381 tttggctgca cgtaaatcta atttcgcgaa atcatcaatc gtaatttcag ggctgattgg
    10441 ctcaactgca atattttctt gtttttcgac cgcttgttgt tccacttttt gtgttccttt
    10501 ggtttggttt tcggttttct tattcgcttc ggcaaataag gctttggttt catcaatcac
    10561 tgcatcaatc tgttttttct caaggcgtga gaatagcgat ttaaacggtg ccacggtatg
    10621 cccgaataat ggggtagcga tattatccca acgcaattcg ctttgtaaga atgcttcggc
    10681 acgttctgcc agttttggta acaccggttt taggtagctc atcagcacac ggaataactc
    10741 aatgcccatt gaacaaaccg cttgtaattc agcctctttg ccttcttctt tggcgatgac
    10801 ccaaggggct ttgtcgtcaa tgtatttatt ggctttatcg gttaattcca taatggcacg
    10861 aatagcttta ttaaattcac ggttttcata gaaattcgct atggtttctg cttgagcggt
    10921 aaattcatta aataacgctt cgtcatctaa tttttcagct aatttgccct caaagcgttt
    10981 agcgataaaa ctggcgttgc gagaagcaag attcactaat ttgtttacga tatcgctgtt
    11041 tacacgttgc acgaagtcgt ctaaattaaa atctaaatct tcaatgcgat cgtttaattt
    11101 tgccgcatag taatagcgta agcattccgg atcgagatgt tttaaatagg tgttggcttg
    11161 aatgaatgta ccacgagatt tcgacatttt cgccccgtcc actgtcacat aaccgtgagc
    11221 aaacacattg gtcggtttgc ggtagccgct gccttccaac attgccggcc aaaacaggct
    11281 gtggaagtaa acaatgtctt taccgatgaa gtgataaagc tcggtggtgg aatctttttg
    11341 ccaaaactca tcaaaatcaa tgcctgcacg gtcgcataaa tttttaaacg atgctatata
    11401 accaataggg gcatctaacc aaacgtagaa gaatttgttt tctgcgtccg gaatttcaaa
    11461 accgaaataa ggggcatcac ggctgatgtc ccattgctgt aaaccacttt caaaccattc
    11521 ttgcatttta ttggcaattt caggttggag tgagccggaa cgagtccact ctttcaacat
    11581 tccctcaaag cttggcaggt caaaaaagaa atgttctgat tcttttacca ccggagttgc
    11641 accggaaact gccgagcgag ggttgattaa atccatcggg ctataggtag aggcacatac
    11701 ttcacagtta tcgccatatt gatcttcggc tttacatttc gggcaggtcc ctttcacaaa
    11761 gcgatccggc aagaacatat ttttttctgg gtcgaacagt tgtgaaatca ctttgctttt
    11821 aataaaaccg ttcgctttta aggttttata aatatcggta gtgatttggc ggttctcttc
    11881 gctgtgggtg gaatggtaat tatcaaagct gatattaaaa ctggcaaaat ccgcttcgtg
    11941 atcggctttg gctttttcga ttaactgctc aggggtaatg cctaatttat cggcattaag
    12001 cataataggc gtgccgtggg catcatcagc acagacaaag tggacttcat tgccacgcat
    12061 acgttgaaaa cgcacccaaa tatctgcttg aatatgttca agcatatgac ctaaatgaat
    12121 tgcaccgtta gcatagggca aggcacaagt aacaagcatt tttcgttttt ggttagccat
    12181 tctttttctc attaaaatta gggtaaaaat tgccgtctat tttagcccaa aagtggcagg
    12241 tttaccagtt ggcgtgaatt tattagagct ttgggctaac aagcggtaga atatgatgcg
    12301 ctagaggcga aacatttttc gcctcaattt cccaaatgat gatgtgggcg aaagatgttt
    12361 cgcctctaaa cctattttgg ataaaaatag tatgcgacaa gtaaagttat accgctacca
    12421 actccccatt caaaccggtg tagtgttacg caagcaacct ttgaaagaaa ggcaaggggt
    12481 gttggtgtgt ttgcaagaac aggagaaagt cggctggggc gaaattgcac cgcttccaag
    12541 ttttagccaa gagagcctag aacaagctga aaaccaagct gtgaattggt taaaggcgtg
    12601 gcagaaagga gagcctgaaa cgttagagca gcttttcccg tctgttgcct ttgggctaag
    12661 ctgtgcgttg gctgaactga ataatgaatt aggcgagcaa gcgaataacc aatcggcggt
    12721 gctgtgctat ggcgatttgg aaaagttaca cacggcattt agccaacata cgaacccaat
    12781 cggtaaaatt aaaatcggtc tcaatcctga acaggaaggc gagcaggcaa atttgctgtt
    12841 gcatactttt ccgaatttac gcctaaggct tgatgccaac cgtctttgga gcttggaaca
    12901 agcggtcaaa tttgctgaaa aaattgcaaa tgaacataaa ccccgtattc aatttatcga
    12961 agaaccttgc caagcgctcg aactttcccg ccaatttgcc acacaaaccg acattgcgat
    13021 tgcgtgggac gaaaccgtga gagaggcgaa ttttttggta aaaaaagagc caaatttgac
    13081 cgctattatc attaaaccta cgctggttgg ttcgcttgaa aaatgcgtga atttaattca
    13141 acaagcacag aagcaaggat tagtagcggt gattagttca agtcttgaga gcagtttggg
    13201 cttaacccaa ctggctcgta tcgcccaaca atacacccca aacagtgtgc cggggttgga
    13261 tacgttaaat ttaatgcaac accaattatt gcgagattgg cacgactcta gcttgccgtt
    13321 ggtcgggcta gaaagcgaat ttgttaggga agttgtggta taatctccca attaaacact
    13381 ctctcccctt gtgggagaga gaccgcttat gagcgttcag cgaaataagc agagagaggg
    13441 gaagcggtca tttttctaaa aaagtttgca catttcccct ctccctgatt tttcttctgg
    13501 acgaagacgt atttcccccc tctccctgat ttttcttcta gacgaagaaa aatctgtccc
    13561 tctcccacga ggggagaggg taaagtaatt tatggtataa aaatagtatg cgtttagaca
    13621 aatttatcgc cgaaaatacc ggtttgaccc gttcacaagc ggctaaagtg ctgaaaagtg
    13681 gtgtggtgac ggtaaacggc aatattgaaa aaagtggtgc ggcaaaaatc agtcaagaag
    13741 atgaaattta ttacgaagat cagaaattag agtgggtgga agaggggcag tattttatgc
    13801 tctataagcc acagggctat atttgttcac acgatgatgg tgagtaccca acggtgtttc
    13861 aattctttga ttatccgtta atgactaaat tgcataccgc agggcggtta gatgtggata
    13921 ccacagggct ggtgctgtta accgatgacg gcaaatggtc gcaccgtatt acctcgccca
    13981 agcaccattg tgaaaagaca tacttagtga cgcttgctga tccggtggaa gatttttatg
    14041 cacagcgatt ggcagaagga attttattgc gtggcgagaa agagccaacc ttgccggctc
    14101 aacttgaaat tttagacgat tacaatgtga atttaactat tagtgagggg cgttatcatc
    14161 aagttaagcg aatgtttgcc gcccttggga ataaagtcga ggcattgcac cgctggcgaa
    14221 ttggcgatgt ggtgttagat gaaaggttgg aagaaggtga attccgctcg ctcacttcag
    14281 aggagatagc cagttttaat ggaaagtaga agaccaagcc tgagcttttt catcatatta
    14341 ggtatgatgg caatgttgcc accattagcc attgatatgt atttgccctc atttttagac
    14401 attgcccgtg acttggcggt ttcgcaagaa aaagtgcaaa ccaccttggc ggtatttacc
    14461 ctaggttttg gggcagggca actattctgg ggaccgatgg cagacagctt tgggcggaaa
    14521 atcattattt taatcggatt agtcggctcg gcgattgccg cttattttct gacccaagtt
    14581 cagaatattg aaacatttta cctgctaagg ttagtacagg gcttatgtgc ggcagccccg
    14641 gcggtggtgc tgggagcatt agtgagagat ctgtttgagc gtaatttatt tgccaaattg
    14701 atgtcggtta ttatgattat ttctatgctt gccccattgc ttgcaccgat tgttggcggt
    14761 tatattgcca aatatttcca ctggcactca attttctatg tgttagtggc gatggggatt
    14821 ttgtgcgtgg tattaattag ttggaaaatc cctgaaacat tagcccccga aaaacgcctg
    14881 ccgttaagtt ttggcaaaac tttaagcaat tttgccatct tactgaaaca taggcctact
    14941 cttggttatg tgctgattgg cggcttaacc tttgcaggta ttttctgttt tttaacctca
    15001 ggctcgattg tctatattgg gctttatggc gtgtcgcaag aaaatttcgg ctatttcttc
    15061 gggctgaata tgattgtgat ggtgacgatg acggcgatta acagcaaaat ggtagtgaaa
    15121 gtcggctctg aaacgatgtt acgaattgct ttagctatgc aactgttagc cggcatttgg
    15181 ctggctttag tggcgatttt tgatttaggc ttctgggcaa tggcaatcgg tattccgctt
    15241 tatatcggaa tgctttccac cattggtagt aatgccagtg ccgccatttt agagcaattt
    15301 ccacaaatgg caggcacggc taacggagta gcaggtacgg ctcgttttgg tgttgcttcc
    15361 cttgttggag cagggctttc acatattgct gtaaccagtg ctgccccaat gcttttggcg
    15421 atggcattgt gcgttatgtt agccggtgtg gtgtattatt ttctgtgtta taagcgataa
    15481 ctaggttggg gttagcttgc gaaaacccaa caaatttcta caagcggtta ataatagtac
    15541 attttttgca aatttttagg cagaattaac cgcttgtgtg gtacgagcgt ggacgctcgc
    15601 accatcgggg caatatctac taagatttta aaaacagcga aatagattcc aaatgcccgg
    15661 tgtgggggaa catatcaatc attgccgctt tttctagcct gtagcctagt tgcaacagtt
    15721 tttcggcatc tcgcaccagt gttgccggat tgcaagagac ataaacaatc cgctcaggat
    15781 tgagtgatgt caagtgatct aggcaaaata gtgctccgtt gcgtgccggg tcgagtagta
    15841 ccttgttaaa cggctctttt gcccaaggtt tgtcagaaaa cggctcatct aaattggttt
    15901 ggtaaaattc cacatttttt agaccgcttg tcaccgcatt ctctcgggct tgttgcacca
    15961 ttggttctac cccttccaca ccgaccaccg atttcgctcg ctcagcaata ggcaaggtaa
    16021 aattccccat tccacagaag agatctaaca ctcgatcttg gttggataat tccagccact
    16081 caagggcttt ttccaccatt ttttcattga gcgtggcatt cacctgaata aaatcccgaa
    16141 ttgaaaaatg caactttaga ccctgaattt gataatacgg gcgttcaccg cacagatgct
    16201 caatgtgatt ttcgctagtc atcacaaaaa gagataattg ctcttgtgtg gcgaattgac
    16261 gcaaattgtg gttatcttgc gccgataatg cccctaaatg gcggaaaaat agggcaatgg
    16321 tattgtccgc actgaccagc tcaatatgcc ccaatttttt cggctgttgc cagttttcaa
    16381 tcaggtgttt taattttggg agcaaattgg caagcggttc aaccagcact tcacagtgtg
    16441 caagcggtat aatttggttg gaattttgca aacgaaagcc gattaccgcc ttgccttgct
    16501 ggatcgcaat gcttaatttt gcccgacggc ggtagtgttt atcgttgccg ataatcatcg
    16561 gctgaacatc aatagcgtgg gtttgcaatt tctgtaagcg ttggaataaa gcctgttgtt
    16621 ttgccttacg ttgcagttca agcgaaatat gctgcatttg gcagccaccg cattgcccgt
    16681 aaagttcgca gcttggcatt cgccgatttg cagatttttt aagaatttta accgcttgtc
    16741 cacgtccgta ttggcgtttc tcttccaaca ctttaaattc cacctgctca tcaggcaggg
    16801 cattttcgat aaaccaagtt ttgccgttga ttttggcaat ccctaagcct tgataatcta
    16861 acgattgaat agttgccttt tgacaagcgg gtgattttat cggttttttt gccgattttt
    16921 cagaataaaa aatagccatt gttttcagat gaattgttat gatataaagt gtcgaaatgg
    16981 ggagattata taagaaaagc agttggcgga aaatggaggc aatatgattt catcggtttg
    17041 gaatgaacgt tatttggcgg ataaaaaacg ggaacaagat caccgctcgc cttttcagcg
    17101 ggatcgggca aggttattgc attcggaggc ttttcgctgt ttgcaggcga aaacgcaaat
    17161 tcacgccgtg ggggaagatg atttttatcg aacccgttta acccattcgt tggaagtggc
    17221 tcaaatcggt agcagtttgc gagaaaaatt attagcggat gtggaaggct ttcaagcggt
    17281 ctgttcggag caggaatttg caaaaaatat ggcaaatctg accgctttat tgccggatca
    17341 tagcttggtg gaatcccttt gttttgccca cgatctcggg caccctccgt tcgggcacgg
    17401 tggtgaaatg gcgttaaatt ataaaatgta cgcctttggc ggcttcgagg gtaatgctca
    17461 atcctttcgg attatgaccc agcttgagcc ttacaccgaa acagccggaa tgaatctgac
    17521 ccgtcgcacc ttactggggg taatgaaata tccggcactc ttgtctcaaa cctcgccgat
    17581 tgagccggca gaaatgagcg aggctcggca tattaatttg caccattttc cacagagcaa
    17641 agggattttt gatgacaaca accacttttt tgagtgggta ttagccccgt taagtgaaaa
    17701 agaccgacgc caattttgca cggttcagcc caatcaagat ccgaaacagc caaacaaaac
    17761 gcaatataaa tctctcgatt gcagcataat ggaactagcg gacgatattg cctatggcgt
    17821 acacgatttg gaagatgcga ttgtaggtgg aatggtcaca ccgcaatcgt ggcaaaatgc
    17881 ggaaaaattg ctggcggagt gccaatccga ttgggtgaaa caacgcctgc cggagattcg
    17941 ggaaaagctc ttttctcagc accgctacga gcgaaaagat gtgatcgggg cattagtgaa
    18001 tcattttatt accaatgtgc gttggaaagc tctgcctgaa tttgacgagc cgttgctacg
    18061 ttataatgcc tatttaccgg aaagtgttgc ctgtgtgctg aaaatcttga aagattttgt
    18121 gtatcaatat gtgatttgtg atgccaaaac ccagcgggtg gaacgcaagg ggcaacgcat
    18181 tctaatggaa ttgttcgata ttttaagcag tgatccgatg cgattactcc ctaataatgt
    18241 gcgggaacgt tggaaaaatg cggaagaatc taagcgtgca agggtaattt gcgactattt
    18301 agccggtatg tctgatgggc aggcgtttaa actttttgaa agtttataat gaactttgtt
    18361 aattttgcaa ggtctcagta ataggtttca tttatttaat aggagatttc aatgaaaact
    18421 gtttctaaag gtcttttagt attagcaact ttggcttctg caacagcatt tgcggtttct
    18481 tccaagtgaa atttatcagc ctcgtggcga attagttaaa gcagatcgtc aaggtaatgg
    18541 tgagtttgaa gtagaatatc gtgtcagtgg taatgatgtt cgtggcttag cgaaaagtgc
    18601 gatcgcccac gctaaacgta aaggtttcca tttagtagaa tctgatattc atagagatga
    18661 tgctgattta aaattcaaac gtggtgacca agagctggat attgaaattg aagtaaaagg
    18721 tagaaatcgg attgaatata aggcagatct agatttagat aaaaactaaa tttacccctt
    18781 aaaacgaccg cttgtgtgat ttaaccgcac aagcggtctt tttattgtgc ttttttgcaa
    18841 aaatactcaa gccgaccggt cccggaattt ggtaaaatag ccgtttaaat gacaataatg
    18901 atgcttttac ttattactta gaggaaaaaa tgtttttagt cggtcagcgt tggctaagtg
    18961 aatcggaaaa taatttaggt ttgggaatcg tgacttcggt ggatcatcgc actgtcacta
    19021 tcaatttccc ggcagcggaa gaagagcggg tctatgcaat tgcagttgca cctttaactc
    19081 gagtgcagtt tcaagccgga gatagaatta acagtataga tggctggcag ttagaggttt
    19141 cagaggttgt ggaaaatcaa ggtgccgtaa tctatttggg caaaagggtg gataacggtg
    19201 aagaagcggt actgcctgaa atgttgctcg atcataaaat cagtttcagc aaaccgcaag
    19261 accgcctttt ttcggctcag attgatcgct cagatcgctt tgcattacgc tttaacgctt
    19321 tgcagcacca gcaagcgcaa tatcagtcgc cactgcgtgg tttgcgaggc attcgagcca
    19381 gcctgattcc acatcaatta catattgcaa aagaagtcgg gcaacgcctt gctcctcgtg
    19441 tgctattagc cgatgaagtg ggactgggta aaactattga agctggtatg attttgcaac
    19501 aacagctatt ttcgggcaga gcagaacgag tattggtatt agtgccggaa agtttgcaac
    19561 accaatggtt ggtggaaatg cttcgccgtt ttaatctgaa attctcgtta ttcgatgaag
    19621 aacgttgtag tgattttgat aaacaagatg aaaatggcga tgatgtaagt gaaaatccat
    19681 ttgagagcga agcgttagtc attacttcac taaactggct ggaaacctca ccgcaacgag
    19741 ccaatcaagt gcttgctgcc gactgggatc tattaattgt tgatgaagct caccatttag
    19801 aatggtcgga aaccgaatct tctatcggct atcagttggt agagcgttta tctcaacaaa
    19861 ttcctgccgt cttgctttta acggcaacac cggagcaatt agggcaagag agccattttg
    19921 cccgcttggc gttgttagat tcggatcgtt tttatgatta tgccgagttt gtacaggagc
    19981 aagcacagta taaaccggtg gcagatgcgg tgagtagctt attaagcgat aaaccgctaa
    20041 gtaatgacga gcagaatgcg attgcggagc tgttaagcga gcaagatacc gagccgatgt
    20101 tccgtgcaat taatagcaaa aaatcggacg aaaatgaccg cttgcaagcc cgtcaagagc
    20161 tgattagtga gctaattgac cgccatggaa ccagccgggt gttgtttaga aatacccgtc
    20221 agggagtgaa aggcttccca catcgggaat accaccaaat cagcctagaa atgccgaaac
    20281 aataccaaaa tgcgttaaaa gtgatgggaa tgatggggag tgtgagccaa agtgatttgc
    20341 tctatcctga atatttgttc caacgaatga acccgaatgc gaaatgggct gaattcgacc
    20401 ctcggattga ttggctcatc actttcttaa aaaatcatcg tgatgaaaaa gtgctggtga
    20461 tctgcaaaca ggcggacact gcgattgctt tggagcaagt tttgcgtgag cgtgaggcga
    20521 ttcgttctgc cgttttccac gagaaaatgt cgattgttga acgtgacaaa gctgccgcct
    20581 attttgctca acaagaagaa ggcgctcagg tgctgattag ttcaagcatc ggttcagaag
    20641 ggcgaaattt ccaatttgct aaagatttag tgctgtttaa tttgccggat aacccggatt
    20701 tattggagca aagtattggg cgattagatc gtatcggaca gaaaaatgac attcagattt
    20761 atgtgccttg ctttaattta tcggctcaac agatgttggc agagtggtat cacaagggct
    20821 tgaatgcgtt tgaagaaacc tgcccgatgg gaacagcgat cttccgtgaa ttaggtgaag
    20881 aattgcaaca attcctgcaa aaacctgaac tttcagccca atttgatgat tttgttgcga
    20941 aaacctataa acgccaacag tatttgaaag ccgaactgga gaaaggacag gacagattat
    21001 tagaactgaa ttctaatggc ggagaagcag ctcaacagct cgctaatgat attgcgaaag
    21061 aagataataa tccgcagttg gttaattttg ccttgagttt gtttgatgtg attggcgttg
    21121 aacaggaaga tttaggcgag cagagcattg tgattagccc aaccggacat atgcttgtgc
    21181 ctgatttccc ggggctatcg gaagatggca cgaccattac ctttaatcgt gaactggcgt
    21241 taatgcggga agaggtggaa tttctcactt gggatcaccc gatgatccgc aatggtattg
    21301 atttaatcac ctccggcgat attggcaaat cagcaatctc attgctggtg aataataaat
    21361 tgcctgccgg tacattatta cttgaggcgc tttatgtggt ggaagcacaa gcaccgaaag
    21421 ggctaaattt aacccgtttc ctaccgccaa ccccgattcg ggttttagtg gataacaaag
    21481 gcaacaatat tgctccgcag gtctcttttg ccgggcttga acgccaatta aaaccggtga
    21541 ataaacagat ggcaaataaa attgccaaaa tggctcgagc ggatattgaa aaattaatta
    21601 aagcgagtga aaaagcggta gaacctcagg tccaacaggt gattgaaact gccaaatttg
    21661 aggcaaatag caaattaaaa gcagaattac accgcttgga atcactcaaa atggtgaata
    21721 aaaatattcg agccgatgaa gttgaagcct tagaacaaca gcttaacgct tcccttgccc
    21781 aacttgaaac ggcaaattat cgcttagata gcttgcgagt gattgtaagt aataaagcgt
    21841 aattttttgc aagtacgaaa agtgattttt tcgatctgtg tcgaaaaaat cacttttcta
    21901 ttttgtgtca tccttgcaga ttatttatgc tattcctcat attgtaaaag gtataaaaaa
    21961 ggaatattat gtatatagat ttgcaatatg ctgtgccgtt attgtttgaa tacgacccga
    22021 acaaaagcca aattaattta gccaaatatg gtattgattt tgaacaggca aagttgcttt
    22081 gggaagatga acgaaaagtt gtactggagg cttgcattga acccgaatta cgctatttcc
    22141 tgattggcaa gatttatgat aaatattgga cagcgttttt tacaccaaga aatgatgtta
    22201 ttcgtttaat ttcagttaga cgttcccgta aaaaagagat ctcatactat gagaaatacc
    22261 attagtgccg aagaattaga acgtatcttc gatgaaggca aagaagatat tttacaatac
    22321 tgcgatcttt ctaccgctca tcgcccgggg caaatgaaaa gggtgaatgt tgatttccca
    22381 aattggatgg tagaagcgtt agataagcaa gccagacatt taggtgtgcc tcgccaagcc
    22441 ttgattaaaa tgtggattgc ggaaaaatta ccggttcaat cacctaggta agcgagtggc
    22501 aaatggcatt aattgaatat aaccctccat tagaaccatt tttagatgag gtttatcggg
    22561 ataaccatat tttagtaatt aataagccta gtggtttatt atcggtgccg ggcaatcgtc
    22621 ccgaatatta cgacagtgca atgactcgag tacagcaaaa atatggcttt accgaaccgg
    22681 ctcatcgttt ggatatggca acaagcggta ttcttttgtt cgccctaagc aaagcggcgg
    22741 aaaaagaact aaaacgccaa tttcgggaac gtgaaccgaa aaaacactat attgcgttac
    22801 tttggggcaa attaggtgaa aaagttgggg ataagggcga aatgaatttt ccgctgattt
    22861 gcgattggga aaatcgcccc cgccagaaaa tttgctatga acgaggcaaa aaagccatta
    22921 cccattatga agtgttagct cattatccga ataatatagc gagagtaaaa ctcacgccta
    22981 tcacggggcg ttcgcatcag ctacgagtac atagccttgc gttaggtcac ccgattattg
    23041 gcgataagtt ttatgctaat ccgctggcaa aaagtttatc gccccgttta tgtttgcacg
    23101 cggagtcact aacaattact cacccgatta caagggagtt gatgacgttt actgctgagc
    23161 cgacttttta gcctcgttca gtaggtgttt gtaatatgcc caatcaaaat attgccccgg
    23221 gtcgattttc cgttccgggg caatatggca atgcccggtg atgcgttcat cggtaatttg
    23281 tggatagctt tgctgaatgg ctttggtcaa atttgccaaa gattggtatt gagcttgagt
    23341 aaacggctga ttattactgc cttccagttc aatgccaatc gaatattcat tgcatttctc
    23401 ccgcccttca aaacaagaga cgccggcgtg ccacgccata tcgttaaaat tcacatattg
    23461 cgtgatttcc ccctccctat taatcaaaca atgggcggaa acccgtagat ctttgatttc
    23521 ttcaaaataa gggtgagcgg ttggttcgag tttaccttgg aaaaacagat cgataaaatt
    23581 tccaccaaat tcttccggcg gtaagctgat gtagtgaata accaacaagg aaatatcctc
    23641 ttgatcagga cgttggctaa aatgcggaga cggcacttgt ttttgaccgg ttaaacagcc
    23701 ctgttcgatt tttaaatttg gcatagtcta aatagggtga atacgttaaa atatggctca
    23761 ttttactaga aaaagagaag aatatgttaa gttatcgcca cagtttccac gcaggcaacc
    23821 acgctgatgt gctaaaacac attgtccagc ttttgatctt gcgagcatta aaagaaaaag
    23881 aaaaaggttt tttatatctt gatactcact ccggtgtggg gcgttatagt ctgttaagtt
    23941 ttgaatcgga aaaaacaggc gaatatttag agggcgttgc ccgtttatgg gagcgtgatg
    24001 atttaccgga agaagtggca ttctatattg atgagctgaa aaaattaaac cgtggcggca
    24061 agttaaagta ttacgcaggc tccccattat tggcggtaca gcaactgcgt gagcaagacc
    24121 gagccattct taccgaactt caccccaatg attttccgct gttacgacaa gaatttgcca
    24181 aagcgaaaaa tgtgcaaacc aagcgagaaa atggctttca acaattaaaa tccgccctgc
    24241 cgcctaaaga gcgtcgaggt tttgtgttga ttgatccacc ttatgaatta aaagaagatt
    24301 atgaattggt ggttaaagcg atagaagagg gctacaaacg gtttgccact ggtgtgtatg
    24361 ccatttggta tccggtggtg cttcgccaac ataccaaacg tatagtgcga ggtttaatgg
    24421 ataccggcat tcgcaaaatt ctacaaattg agcttgccgt tcgtcctgat agcgaccaac
    24481 gtggaatgac ggcaagtggt atgattgtga tcaacccacc gtggcagctt gaaacccaga
    24541 tgaaaaaaat cctgccatat ttaaccgagg tgcttgtgcc ggaaggaaca ggttcttgga
    24601 aggtggagtg gattacgcct gagtaaatta aatacggata gcacaagcgt ggacgcttgc
    24661 gccatcataa attctgattt gcaatatttt ttagaaaaat aaccgcttgt cttatcaaga
    24721 agtgggggaa atataaaagg aaaaaacgat gcaacaatac aaacacgact ttattgaatt
    24781 tgccttaagc cgcaatgtgc tgaaatttgg cgaatttacc ttaaaatcag gcagaatcag
    24841 cccctatttt ttcaatgctg ggctttttaa caccgggcgc gatttagcca aattaggcga
    24901 atattacgcc aaagccattc aagccagcgg cattgagtat gatgtgttat tcgggccggc
    24961 ttataaaggc attccgattg caaccacggt tgccgtggca ctagccaacc tgttcgatgt
    25021 ggataaacct tgttgcttta accgcaaaga ggcaaaagat cacggtgaag gcggtaattt
    25081 aatcggttct cccttaacgg gcaagatttt gctggtggac gatgtgatta ccgcaggcac
    25141 ggcaattcgt gagtcgatgg aaattatcaa tgccaataat gcccagcttg ccggtgtgct
    25201 gattgcgtta aaccgtaaag agaaaggcaa gggcgagttg tctgcgattc aagaagtcga
    25261 acgtgattac ggttgccaag ttttctcgat tgtggatttt gatgatttgg tagcatttat
    25321 tgaaacgtcg ccacaatacg ctccttattt gccgaaaatg cgtgaatatc gtgaaaaata
    25381 cggtgtttaa cttttgcaaa aaaacagcaa aaactcaccg cttgtcactc tctaatctca
    25441 ccattatgaa tcactttcat cttttggtga gattttttca attaaaaagc cgataaattg
    25501 attgtgagct ttagctaatt ggcttaggat aaactcctgt aatacaggag ttggagaact
    25561 aaaatggcac atcaaaaatt accttttcac gcagacaccg ttggctcata tttgcgttcc
    25621 gatgcttgga aaaaagctca cgcagactat aaagcaggca acatttccct cgaacaacgt
    25681 gatgaaattg tagaagcgga agtgaaaaaa ttagtacaag catcaattag atgcgggcat
    25741 tcaagttgtt acagacggcg aatatcaccg ctcttggtgg catattgatt tcttggaaaa
    25801 tctgaacggc attgaaggct atgtgccgga aaaagcctat gcgtttaaag gggttgaggt
    25861 tcgcccttat aatacacgtt gttgcggtaa agtgtcttgg aatccgaatc acccttttat
    25921 tgagcatttc aaaaaattca atgcgattgt aggtggtcgt gcggtggcga aatttaccat
    25981 tccaagtcca aaccaattaa tgtacccgat tcagtgggat cacggcattt acccaaaccg
    26041 tgaggaattt gccaaagatg tgcaacaggc ttataaagag gcgattaaag cgttctatga
    26101 tgccggctgt cgttatttgc aaattgatga tgtctattgg gggtcgttgt gtaataacgt
    26161 tggtcaaccg acatttgaag ccgataaagc tcaagcggtg gcgaatattc aagccattct
    26221 tgccgataag ccggaagatt taaccattac cacccacgtt tgccgaggca actataaatc
    26281 ttcttattta ttgacagggg cttatgatcc gattgccgac ggcttatttg ctcaaaccaa
    26341 ctatgatggg tatttcttag aatatgatga cgagcgttca ggcggttttg agccgttaaa
    26401 acattttgcc aacaacaaag ggcgtgtggt attgggctta attagttcaa aattccctga
    26461 attggaagat aaggaagcgg ttaaagcccg tattcaagaa gcggcaaaat atgtgccgtt
    26521 agagcagctt tgcctaagcc cgcaatgtgg ttttgcctca accgaagagg gcaatattat
    26581 gtcggaagca cagcaatggg cgaaagttcg tcttgtggag gaaatcgccc aagaagtttg
    26641 gggcgaagat taattagagt gaaaaatgcc cgtaacaagc gggcattttt tgtgaatttt
    26701 ttgcaaattc aagccattta gcgaatgcgg ttaaaacctt gttctaaatc ggcaatcaaa
    26761 tcttccaccg cttccaagcc aacgtgaatg cgaattaatg ttcccgtcag tttgcgttca
    26821 atcgccgggc ggattttggc aatttcttcc ggctgattgg caagaatcag cgattcaaac
    26881 ccaccccaag aatacgccat tgaaaacagt tcaaaatgct ctaggaagtt ggctaatttg
    26941 tcattcgaga gcttttcgca aagttcaaat gaaaatagac cgcttgaacc taaaaaatcc
    27001 cgcttaaaaa attcgtgccc cgggcagctt tccaacgccg ggtgataaac tgctttcact
    27061 tcagggcgtt gagccagcca gttagctacc gcaatgctac tttgttcgtg ctgttttaag
    27121 cgaatgccta aggtgcgtag cccccgagcg gtgatgtaag cggaatcagc atccaccatt
    27181 tgccccatta aataagagcc ttcacgcagt ttatcccaac aacgggcgtt agaaaccgca
    27241 gtaccgatca tcacatcaga atgcccgact aaatatttag tgccggcttg aatggaaata
    27301 tcaatgccat attctaaagc agggaacagc acaccggcag accaagtgtt gtcgatcata
    27361 atcacgattt ctgggttgat ttcacgagca acacgcacga gagtcggaat atcaggcact
    27421 tccattgtta gcgagctcgg cgattctaaa aaaagcactt tggtgttcgg ttgcacaagg
    27481 gctttcaagc cttcaccaat catcgggtca taataagtag ttgaaacacc catacgtttt
    27541 aacagcgcat tacagaattc ttgtgtcggt tcgtaagctg cgcctgtcat taaaacgtgg
    27601 ttgccttgtt ccacaaaagc taaaatcgca ttggtgactg ccgccgcacc gcaagggtaa
    27661 aggtagcaac ctgctccacc ttctaattca cacatcgctt cttgtaatga aaaatgagtg
    27721 agagtgccac gtctgccata aaataatgct cctttgtagc ggttttgtgt agcgtgtttt
    27781 ttctcttcta aggtttcaaa cactaaagat gaagcacgct gaatcaccgg gttaactgct
    27841 ccttgtgtgt tacgtttttt acgccctgta tgaacaagtt tggtggaaag atttttatag
    27901 ttagacataa cttttcctaa agtaaaatgc ataggggcaa atcaacattt gcccctttat
    27961 taataattaa cgaaacataa agttatttct ttgacggcta cgtttaaatt ggctgattag
    28021 cacaatgacc gcaacaatta agtaaaccgc aaaagtaaag attagccatt gtgccattga
    28081 aaagccgaac atttcccatt ggctttggct acaattaacc ggaccggggg caaacacttg
    28141 tggtagccat tggtcaagcg gcaaggtttg cgggaaatta actttaaatt cgcattgatt
    28201 ccatggtgat ggattgacct gataatcgtg gtgtttgatt gaaagtacta gccctttaaa
    28261 tgcgctacca agccaaatta gaattgccaa gtagcgaata atcgcatatc tattaccaag
    28321 aaatcctaaa ataccggcaa ataaaatacc aaataaagca actcgctcat aaatacacat
    28381 tacacaaggt actaatccca tcccatgttg gaaataaagc gctgtgcctt caagtataag
    28441 acagcttaac attagtaaaa accatgcact gcgagattgt gatagatttt taaaaaaata
    28501 gagcatagtt attcctcatt ttgtgaactt aaggcattct accttatttg gtatgagtta
    28561 tctataaact aacgtgtaat aaaccatccc caatttatca ttacttcagt catagaaggt
    28621 agtaagaatt ctaaccctaa gaaaccgaca atagatagaa caatggtata aggtaatgcc
    28681 atatagacca ttctgccgta agacagttta attaacggcg caaaggagga cgttaataag
    28741 aataagaaag cagcttgtcc gtttggggta gcaacagaag gaagatttgt gccagtatta
    28801 attgcaactg caatcaggtc gaactgctca cgatctataa tgccggcatc tagtgcggtt
    28861 ttagcttcat taatgtaaac agtaccgacg aagacgttat ctgaaatcat cgagagcaaa
    28921 ccattgaaaa tatagaataa tgaaagctgt gaatgtggtt cggcagataa cacaaaggca
    28981 atgatcggct caaataattt taaatcaata atcacggcaa caaccgagaa aaacacaata
    29041 agcaatgcag taaaaggcat agattcttgg aatgctttcc ctaaagtgtg ttcatcagta
    29101 atgccacaaa atgcagtgca aataatgatg atggttaagc caataatccc tacatcggca
    29161 agatgtagcg ctaagccaat aattaaccaa attccagcaa tggcttgcac cagcatcttt
    29221 aagcgatctt gtttcgtcat tttttgttct tttagttggc tatagcgagc gagtacgccc
    29281 caaactttgc taggaagccg gtctccataa ccaaataatt tatatttttc tacaagaaag
    29341 caggtcgcaa tcccacaaat taacacgggt aagctaactg gtaatgctct aagtaagaat
    29401 tcgataaatc cccattccgc ttgggaggca ataattaagt tttgtggttc tcccaccatg
    29461 gtcattacgc cacctaaagc tgagccaata ccggcgtgca tcaataaact tcttaaaaaa
    29521 ccacgaaatt gctctaaaat ttctttatta gagatgattt tttcatcatt ggtaatatca
    29581 gtagaatctt caaagttatt acctgatgcg actttatgat atacgccgta gaaacctgtt
    29641 ccaacgctaa tgattacagc aataaccgtt aaagcatcaa gaaaggcgga taaaaaagca
    29701 gcgcttaagc agaaagaaag ggaaagaatt tttttcgaat gaatggcgac aagcagtttg
    29761 gtgaaaatat aaagcaataa ttgcttcata aagtaaatac cggcaaccat aaacattaaa
    29821 agaagaataa catcaaagtt tgccataatt tcttctttaa tgtggtgagg atttgtcata
    29881 ccgattacaa ctgcttcaat cgctaataaa ccacctggct gtaatggata acattttaat
    29941 gccatagaga gagtaaaaat aaattcagcg actagaaacc agcctgcaac aaaaggattg
    30001 ataaagaaat aaatgagagg attgataatt aaaaatgcca aaatgcacaa tttataccac
    30061 tcggggcttt ttcctaagaa acttttgaac agagcatcaa tgctactcat ataaaggacc
    30121 tcaaaatttg taaacagata ttacaattgt aatatagttt agattaaagg ataatagtat
    30181 tactgaactt tttagtcgca ataattgatt agaaataaag aatagttaga ttttagataa
    30241 gcatattttt tgcttggggg gcattaatgg gtcacagtga tattttaaaa gcgcaaagcc
    30301 cggcagcgtt agcggaagaa tatattgtaa agagtatttg gaataatcat ttccctgccg
    30361 gctctgatct tcctgccgag cgagagttag cagagcgcat tggggtaaca agaacaactt
    30421 tacgtgaagt actacaacgt ctagcgcgag aaggttggtt aagtattcag cacggcaagc
    30481 caacaagagt gaatgatatt tgggaaactt cggggcctaa tattattggc actattatta
    30541 agctagataa aagctatctt ccagtggtga ttgccaatgt ggtgtcatta cgtactcgta
    30601 tggcggaggc ttatattcca gaagcgattt accttgctcc tgaagaaagt gctaaactct
    30661 ttgatggact agatgaatta gaaaatacag cagctgctta tgctgaattt gattataagt
    30721 tattcagaca atttactttt ttagccaata agcctgtgta tgcgttgatc ctaaatagct
    30781 ttaaatcaat gtatcatcaa gtcgcaaaaa ttttctttgc tgatgaaaat aatcgtcaat
    30841 taacgttaag cttttaccgt tcattattat gtacttgtct tgcaaaagat agtgaaaaag
    30901 cagccgcttg tatggctaaa aatcgccaat ctagtggtga aatttggcaa aaattatccg
    30961 ctaatattcc tgaaagcttt ggtcagcttt aacagaaggt agaattttga acgaaattat
    31021 ttttagctta gaaccgcaag ataatgctcg tctgcaatcg ctttgtggtg catttgatga
    31081 gcatttagcc ttaattgaaa aaagttttaa tctcattatt gctcgaacag gcttcaactt
    31141 tacgattcaa tcggaagatg acaatcacta ttctgctacc ttggttcaaa atagtgtgaa
    31201 gctgattaag caactgtata atgaaactgc cccgattaaa ggcaaaatta aggaattgga
    31261 cttagaagat atacatttgg cgattcagga aagccgaatg ctactacaaa accaatggca
    31321 agccggctcg caaggcgaaa tagcgattaa aaccaagcga ggggtgatta aacctcgtag
    31381 cgaacatcaa caagcctatt tacgaaatat attaagccac gacatcagtt ttggtatcgg
    31441 gcctgctggc acaggcaaaa cctttttagc ggtagcggca gcggtggaat cgcttgaacg
    31501 ccaagaaatc cgccgtattt tacttacccg tccggcggtg gaagccggtg aaaagctcgg
    31561 ttttttaccc ggcgatttag ggcaaaaaat tgagccttac ttacgcccgt tatatgatgc
    31621 cctgtttgaa atgcttggct ttgaaaaagc tcaaaagttg atggaacgtg gtgtgattga
    31681 aattgcccca cttgcttata tgcgagggcg tactttaaac gatgcgttca tcattttaga
    31741 tgaaagccaa aacacgacta ccgagcaaat gaaaatgttc ttaacccgta ttggctttaa
    31801 ttccaaagcg gtgattaccg gcgatattac ccaagtggat ttgccccgta gccaaaaatc
    31861 aggcttaaaa cacgcaatgg aagtgctaaa agaagtgccg gaactcagct ttaatttctt
    31921 tgacagcaaa gatattgtcc gccaccctgt ggttgccaaa attgtgcaag cctatgatgc
    31981 gtgggaagcg gttgatgaag agcgtaaaga acagcgaaaa ctggaaaaat tagctttaga
    32041 gcaagaaaaa attcttgctc aagctgaaat gttatagctt acaagcggtc atatttcgct
    32101 aattttttgc aaaaaatcgc tgaaatttca ccgcttatca taacagttgt tcaacaaaaa
    32161 agcgggaagt taattcccgc ttttctttat cttattgttt cattataaga tttcttttgc
    32221 tttagcaacc acgttttcaa cggtaaagcc gaagagtttg aataattgat ctgctggtgc
    32281 ggattcacca aagctattca tacctacaat tcgaccatca aagccgacat atttatacca
    32341 gaagtcagct aattgagctt caatcgccac acgtttagtg actgaacgtg gtaataccga
    32401 ttcacgatag gcttcatctt gtttgtcaaa cacgttggtg cttggcattg aaactacacg
    32461 cactttcacg ccttctgcat ctaacacatc agcggctttc attgctaaat ctacttcaga
    32521 accggttgca attaagatta aatccgggca actgcctttt tcgcaacatt cacgcaagat
    32581 atagccacca cgagagatgt tcgctaattg ctccgcagta cgttgttgtt gagccagatt
    32641 ttggcgggta aagattagtg ctgtcgggcc gtctttacgt tctaccgccg ctttccaagc
    32701 aacagcagat tctacttggt ctgccggacg ccaggtttct aagtttggaa tttggcgtaa
    32761 tgaagcagtt tgttctaccg gttggtgggt cgggccgtct tcacctaaac cgatggagtc
    32821 gtgtgtataa acaaataagg cacgttgctt cattaaggct gccatacgca ccgcattgtg
    32881 tgcatattcg tagaacatta agaaggttgc accgtaagga atgaaaccac cgtgtagggc
    32941 aatcccgttc ataatcgcag acataccgaa ttcacgcacg ccgtagttga tgtagttacc
    33001 atctacattg tgttccgcac gaatcggttt tgagccagac cataaggtta agttagagct
    33061 tgctaagtca gctgagccgc cgaggaattc aggtaagatt ggcgcgtaag cttcgattgc
    33121 attttgtgat gctttacggc ttgcaatggt tgccggattt gcttgtaatt tttcaataaa
    33181 agctttgctt tcagcttccc agttagccgg taattcgcct gcgtaacggc gtttaaattc
    33241 agcggctagt tcagggtatg ccgcttcata agcagcaaat ttagcgttcc aatctttttc
    33301 tgctaatgta ccttttgctt ttgcatccca ctctgtataa atttcagctg gaatcacaaa
    33361 tggggcatgt tcccaaccta aaaattcacg agcggcttgg atttcagcat cacccaatgg
    33421 cgcaccgtgg caatcgtgag agtttgattt atttggtgaa ccatagccga taatggtttt
    33481 acaaataatt aaagttggac gctcggtttc ggcttgtgca ttttcaatcg caaatttgat
    33541 ttgttctggg ttatggccat cgacattacg gataacttgc cagccataag actcaaagcg
    33601 ttgtgcggta tcatcagtga accaaccatc aacgtggccg tcgatagaga tattgttatc
    33661 atcgtagaaa gcaatcagtt tgcctaagcc taatgtaccg gcgagagagc aagcttcgtg
    33721 tgagatacct tccattaaac agccatcgcc taagaaagcg taagtgtagt gatcgacaat
    33781 tttatgacct tcacggttaa attgtgctgc aagggttttt tccgcaatcg ctataccgac
    33841 cgcattggta ataccttgac ctaacgggcc tgtggtggtt tcaacacccg gtgcataacc
    33901 atattcaggg tgaccaggtg ttttagaatg taactgacgg aactgtttta aatcttcaat
    33961 agagagatca tagccggtta aatgaagtaa gctatagatt aacattgaac cgtgtccgtt
    34021 agacagaaca aaacggtcac gatctgccca tttaggatta gttggattgt gttttaaaaa
    34081 atcacgccat aaaacttctg caatatcagc catacccatt ggtgcgcctg ggtggcctga
    34141 gttagctttt tgtacagcat ccatacttaa aaaacgaatt gcattcgcta gcactttacg
    34201 ttctgtcatt tgtgttactc ctaatcgaga atgttatata aaatggaaag gatatcgaat
    34261 tggattctac actattttgc tagaaaaact caaaaatgga aatgagaaat gtgatctgta
    34321 tcacaaaaaa tgattaaatt gtgatttgtt ttgattggat tttaatagac ggttttttcc
    34381 taatacaata ttttcttgat aaagcgaatg tttagtagtt gatctaggca acaaatttat
    34441 ctaaaatacg cactcttttt ggcgttgagc atttgctcaa catttttatt aattacatat
    34501 ggtacctatc agcggtagag attctaacaa gataggcggc gatatggctt cttatgaggt
    34561 tccccaatga aacaaggtat tcacccagaa tataaagaaa ttacggcaac ttgctcttgc
    34621 ggtaatgtag ttaaaactcg ctcaacagtg ggtaaagatt taaacttaga cgtatgtggc
    34681 aactgccacc cgttctatac tggtaaacaa cgtgttgttg acaccggtgg tcgtgttgaa
    34741 cgctttaaca aacgtttcag catcccaagc tcaaaataat ttgattattg caaaccccgc
    34801 taatgcgggg ttttgttttt cttatatatc gaattaacaa gcggtgtatt tttctatcaa
    34861 ttttgcaaat tggtgattta accattttgc aggagctacc agagaaaaac ctcgagtatc
    34921 attattatcc tcggtccatt tatctgcgat caccataaaa gtttcaacat ctttcttagg
    34981 ttttggatac cagcgtgcaa tattagctgg atgattggca taaaatgaga gcaatttctt
    35041 gcctaatgca caagaaatat ggacaccacc tccatcaact gcaattacaa tatcagcaga
    35101 gtttactaat gcacaataac ctaaaatatc actattaggt gctaggctta tttcaaatgg
    35161 ggctttaatt ttcgacaaat attcggcact attggttgta ttggtcagca aacaactaat
    35221 atgttgaaca tatcttttat caatcataga taatagctct gataattctt gagtagaaat
    35281 ttcacgcata ctaccttgag gattcaatag taatcgaatt ttcttctctt gccatagcgt
    35341 atttgcaaaa ctgcttagtt cattaggaat gtttaaatta taattgacct gattt
//
LOCUS       DANMCL010000014        34759 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.014, whole genome shotgun sequence.
ACCESSION   DANMCL010000014 DANMCL010000000
VERSION     DANMCL010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34759
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.014"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(132..842)
                     /locus_tag="PXF40_000637"
     CDS             complement(132..842)
                     /locus_tag="PXF40_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HDL5802009.1"
                     /translation="MFMVIQLALYNLQTYEVGRNATTIFMTTDKVYTGGSTWTYLFAD
                     ADNKITSVREMNGFGDVEKEFKCGEYKEAVTIASKEDLAKRKTQPRLWSSIYMSPEQN
                     MMWVTDNTSKNLENAKQDAFKQCEKNGGRNCQMILSFSNMCLAFAQGYKDGQGFEDFG
                     YGIVSSLAEENALENCNQKGGSSCLLSAPAVCAIPCDILSNNKCMYDQPQIIIPGKNN
                     NQPINPPANGNGEHWLSN"
     gene            complement(811..957)
                     /locus_tag="PXF40_000638"
     CDS             complement(811..957)
                     /locus_tag="PXF40_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802010.1"
                     /translation="MIKPLDSVYWRGKDVSEFFARKRLPDTAVQCVKDNELSYVYGYS
                     TSFV"
     gene            complement(1075..2292)
                     /gene="fabB"
                     /locus_tag="PXF40_000639"
     CDS             complement(1075..2292)
                     /gene="fabB"
                     /locus_tag="PXF40_000639"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HDL5802011.1"
                     /translation="MKRVVITGLGVISSIGNNKEEVLESLKAGKSGIEFVPEFAEVGM
                     RSQVAGTIKLNPAELIDRKIYRFMGDAAAYAYLSMKEAIEDSGLTEEQVSNDRTGLVI
                     GAGTGSAHSQLVACDAVRGPRGVKAVGPYAVTKTMASSVSACLATPYKIRGVNYSISS
                     ACATSAHCIGHAMELIQLGKQDVVFAGGAEELSWECATEFDAMGAVSTKYNETPTKAS
                     RAYDANRDGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYGATSDGYDMVAPSGEGA
                     ERCMRQAMATVNGEIEYINVHGTSTPVGDVKELGAIRNVFGDKTPAISSTKSMTGHSL
                     GAAGAHEAIYSLLMLDNNFIAPSINIETLDEQAQGMNIVTERQDKALTTVMSNSFGFG
                     GTNACLVFQRYSK"
     gene            2553..5090
                     /locus_tag="PXF40_000640"
     CDS             2553..5090
                     /locus_tag="PXF40_000640"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HDL5802012.1"
                     /translation="MKTLTLTANKITAVEGAAIGANQGSFAQKLNSTKARIDQLNAYR
                     IERAINANNHHFMHVFSLIPLLIHLNHPVLPAYVENAPQGIWHFQLSDYQKQFLVSYR
                     FDEAISADHLGPHPSFDALYSMGSTGTITQTSCSDLDLWLCYPNHFTIEQYKLMELKI
                     NKLQEWAKTFQIDINIYLMNPEQFKSQTYNSSVTDEHSGSAQHFFLLDEFYRSAILLA
                     GKRLLWLHLHKNEYQNVHNNPEIDLTEWIDFGDFSSLSTSEFFGASLWQLYKGINNPY
                     KSAIKILLLECYAHTYPKTKLISKEFKKKLLSDNALEYHFDPYLAMLELVTEHLRSRK
                     EWVKLDRLRVCFYAKAVEGEINNNWRSRDLDELVNQWSWSEKQIQLLQNRQHWKIKQV
                     MNHENMLIDHLLQSYRNLIHFARKFHINPSIMTNDTDILMRKLYSVFEALPGKISLIN
                     HKISSNLAEKAITFIEAKVGSALQPGWYLVNQAPKSRYDSENRYVHYNKSPIKLIAWG
                     YFNGIINAATNLHTVSPNLDIEKLRQFITDLRLSFPIQAPEVTNDDMHHPNEIRNLVI
                     ALNLVQDPTEHIDELPKKVYPSDLFNFGKAQKTLVGSVSIIYRNVWNEIRTQHFDGED
                     AILKALKLVSNRIYQGNSSPQSVNVFCYSKYLRSELRDFVADLVHKCITIQTGCLLQE
                     NEFSTLKVAGKTWQFLFHKKTFSIKQIDEQQAVENLNSFAKTKQNAKSENEKKKEFPQ
                     QISEFASEGFLQFFFEDNVDNSFNVYVVDERNNVESYYNCFGNKEEKIRKINKLQNEK
                     QLKTETPASFGSFNHPQFYQLISPNGELCIVPFQSRQHLDYLAQKHH"
     gene            5121..6989
                     /locus_tag="PXF40_000641"
     CDS             5121..6989
                     /locus_tag="PXF40_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HDL5802013.1"
                     /translation="MSGLVSPELIKTVALLATSVTIVPLFKRLGLGSVLGYLVAGCLI
                     GPSGIGLFQDPAAVVHMAELGVVMFLFIIGLEMHPELLWAMRKAIFGRGFLQVAICGT
                     LLTLAGIYLLGFSKEVAFIAGMGFTLSSTAIVMQVLEDKGISSTPKGQRIVATLLFED
                     LAIVPLLASVAFLAPNQVDAESSTNWSAIGLSLVAVLILVASGKWLMNPIFRVISKAK
                     VREMMTAAALLVVLGSALLMEISGLSMAMGAFLAGVMLSESSFRHQLEADIEPFRGLL
                     LGLFFMGVGMSLDLSLVLNNWLWLLVIVAVYVIGKGLGIFIAASITRLTLNESIVRTT
                     IMAHGGEFAFVLFSAAATAGILTPDTHATLTAAVIVSMLLSPLLILIKQGVRKKKAKN
                     ESTNMTGVELPEDLEANVLVIGFGRFNQIVCQALLAKGLSVSVIDSNTDHIRAAARFG
                     FKLYYGDGARLDVLRASGIANANCVIVGVGNPERTEKIVELIKSEYPLVPVFARTYDR
                     QSAVDLVKKHHVDYHIRETFESALALSQAAIERLGSSEEEAKQIISYVRRLDAERFNE
                     ELLHGFSAEVIRKYWVPTPWVNPQHEGSALNEETADILEELGETVEVIKVDITDKN"
     gene            complement(7149..8045)
                     /gene="malM"
                     /locus_tag="PXF40_000642"
     CDS             complement(7149..8045)
                     /gene="malM"
                     /locus_tag="PXF40_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose operon protein MalM"
                     /protein_id="HDL5802014.1"
                     /translation="MKKTLLSTAIFFAHLLVVSPSIANGSAGKSIHINSAELAQIQWQ
                     DVPFSQTVKTDLSEQHKQAFTTAFAGIASPVAAYRIPANQGTLEIEIESPVMDKNVFV
                     PTAVVLDSQFNVASTYPSSEFKLLEERGLKGSRLGAELNLTPAMNQDYIYLLIYTTQQ
                     DLAKTTMMPHPAKTYAKATGKQPPAINDIEVAHSLKGQIHINVTGSNGTKFIGLPTEI
                     FSSNKAATPAAKTAIPLPIKENPVAVKTAVDKDTEAYFNQAVMKAIKAKDINKAMNLV
                     NEAEKLGLTSPRQIFLKNVSSN"
     gene            complement(8126..9415)
                     /locus_tag="PXF40_000643"
     CDS             complement(8126..9415)
                     /locus_tag="PXF40_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltoporin"
                     /protein_id="HDL5802015.1"
                     /translation="MKKTVLAVAISGAMFAASASAVDFHGYARSGIGWTSGGGEQSAF
                     TVNGGGSKYRLGNESDTYAELKLGQELFKSGEKSIYFDTNLAYGGTLHNNDWTPTSPA
                     LRELNVQFKNFADSLPGATLWAGKRFYQRHDVHMNDFYYWDISGPGAGVENIDLGFGK
                     LSLAVTRDTERGGANTFGYTTVYKLDPSTGKIKLDKQRNKADVYNDIFDVRLAGIELW
                     KDGSLELGFDYGNAHAKKGAALEKGATKNGYMVTAEYTQGNFFGGFNKFTAQYATDSM
                     TSWNNGHAQGSKADNKGNMLRLINQGVVQASDKVEVMYALIYEKTKLDNKQGKTWYSA
                     GIRPMYKWNDTMSTLLEVGYDRIKDQATGKKNDLVKYTVAQQWQAGNSIWARPAIRVF
                     GTYARWNDKFNTKARTDAGYKAKDGEFITGVQFEAWW"
     gene            complement(9513..10631)
                     /gene="malK"
                     /locus_tag="PXF40_000644"
     CDS             complement(9513..10631)
                     /gene="malK"
                     /locus_tag="PXF40_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005552148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter ATP-binding
                     protein MalK"
                     /protein_id="HDL5802016.1"
                     /translation="MANVSLRNVGKSYGDVHISKDINLEINEGEFVVFVGPSGCGKST
                     LLRMIAGLEDITTGELYIGGKLMNEVEPSKRGIGMVFQSYALYPHLDVAENMSFGLKL
                     AGVSKAERDQRVNQVAEILQLAHLLDRKPKALSGGQRQRVAIGRTLVSQPEVFLLDEP
                     LSNLDAALRVQMRVEISKLHKKLNRTMIYVTHDQVEAMTLADKIVVLNAGGIAQVGKP
                     LELYHYPANRFVAGFIGSPKMNFLPVKVIAVEPERVKIELPDANHHNFWIPVSGEGVN
                     VGDNLSLGIRPEHLVPSDQTQVTLHGIVQVVELLGNETQIHLEIPEIKQPTLIYRQND
                     VVLVNEGDDLNIGILPERCHLFKEDGTACKRLFVEKGV"
     gene            11052..12242
                     /gene="malE"
                     /locus_tag="PXF40_000645"
     CDS             11052..12242
                     /gene="malE"
                     /locus_tag="PXF40_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose/maltodextrin ABC transporter
                     substrate-binding protein MalE"
                     /protein_id="HDL5802017.1"
                     /translation="MKNKCVKFTLATLATLVLSGTVMAKMTEGKLVIWINGDKGYNGL
                     AEVGKKFEKDTGVQVLVEHPDRLEEKFAQVASTGDGPDIMFWAHDRFGGYAQSGLLAE
                     VNVSKEFKDKFVDFAWDAETYNGKIIGYPVAIEAISLIYNKDLVKEAPKSWEEIIELD
                     KKLKKEGKNAIMWNLSEPYFTWPIAASNGAYAFKFANGKYDPKDIGVNNEGAVKALQF
                     VVDMVKNKHISADMDYAVAEASFNKGQSALTINGPWSWGNIDKSGIKYGVTLLPTLNG
                     QASKPFVGVLSAGVNSSSPNKDLAKEFLENYLLTDDGLDAVNKDKPLGAVALKSYQEK
                     LAADPRIAATMANAKNGEIMPNIPQMSSFWYAEKSAINNAVTGRQSVKEALDDAHSRI
                     QKQQ"
     gene            12361..13899
                     /gene="malF"
                     /locus_tag="PXF40_000646"
     CDS             12361..13899
                     /gene="malF"
                     /locus_tag="PXF40_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalF"
                     /protein_id="HDL5802018.1"
                     /translation="MLTQTQSKSTHWLKYLLAGLVLLLDFYLVVLMYSQGEYLFAILT
                     LIILTSGVYIFTNKNTYAWRYVYPGITGMAIFILFPLVATIAIAFTNYSGSNQLSFER
                     AVSVLTEQRYFAGDKYQFTLYPQADNKYQIALTNPTTEQTFVSEPISLATGTNVVVTE
                     QNRPTGEVAPLKVITQNRAALQSMKVVLPNNNELTMSSLRQFSEQKPRYQFDEENKIL
                     LNNETGKRYQANDETGFFQSIDENGHWQSETLEPGYTVTSGFNNFIKIFTDEGIQKPF
                     VQIFIWTVIFSLLTVVFTVILGMVLACLVQWEALKGKAVYRVLLILPYAVPSFISILI
                     FKGLFNQSFGEINMILNQLFGISPEWFNDPLLAKVMILIVNTWLGYPYMMILCMGLLK
                     AIPADLYEASAMDGASTWQNFSKITFPLLLKPLTPLMIASFAFNFNNFVLIQLLTNGR
                     PDMIGTTTPAGYTDLLVSYTYRIAFEGSGTQDFGLAAAIATIIFLLVGGLALLNIKAT
                     KMEL"
     gene            13952..14842
                     /gene="malG"
                     /locus_tag="PXF40_000647"
     CDS             13952..14842
                     /gene="malG"
                     /locus_tag="PXF40_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001252048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose ABC transporter permease MalG"
                     /protein_id="HDL5802019.1"
                     /translation="MAIVQSKSVRYRVWATHFILICFLALIIFPLLMVIGISLRPGNL
                     AIGDIIPSQISWEHWQAALGFDVTHADGTVTPPPFPVLRWLWNSIKVATITSIGIVTL
                     STTCAYAFARMKFKGKKTILQGMLIFQMFPAVLSLVALYALFDRLGQYVPFLGLNTHG
                     GVIFAYLGGIALHVWTIKGYFETIDGSLEEAASLDGATPWQAFRLILLPLSVPILAVV
                     FILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLYPQNYLWGDFAAAAVLSAIPITL
                     VFLLAQRWLIGGLTAGGVKG"
     gene            14917..16974
                     /locus_tag="PXF40_000648"
     CDS             14917..16974
                     /locus_tag="PXF40_000648"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HDL5802020.1"
                     /translation="MKNALPYLCLFYTSSLFAQSWQHSHFSDFNDDLEKHFFQSQVQL
                     EKGSYPLRFKFGEQCYQPQQAIKLNQSVALVPCINEAPQLRLFRQGNYLAQIDLRSGT
                     PTPTISVEQQLQHNEAMFQSCPNWDKKPIEIDVSSTFAEGESVSDFYSGNTAIVKNGK
                     VTLMPNENASGLILLEKSNTENTATFDWKNATVYFVLTDRFYNGDPTNDHSYHRQKDG
                     MQEIGTFHGGDLKGLTEKLDYLQQLGVNVLWISSPLEQMHGWVGGGDKGDFPHYGYHG
                     YYHLDWTKLDANMGTEDDLSRFVQQAHQRGIRVLFDVVMNHTGYATLADMQEFNFGGF
                     YLTPDEISRTLGEKWTHWKPKSGQNWHSFNDFIRFNDNQAWQNWWGKEWVRADIADYD
                     SPKFDDLKMSLAALPDLKTESEQAVKLPEFFANKNTNAKTLPNAKVRDYLIGWLSDWV
                     RKYGIDGFRVDTAKHVEKSTWLVLKQSAQQALNEWQKANPNAGFNDRFWMTGEAWGHG
                     VFKSDYYQNGFDAMINFDFQDQAKQGLNCFAHIEPIYAEMNRKLSDFNVLSYLSSHDT
                     RLFFHSDSEQNIEKHKTAANLLLLSPGAVQIYYGDESGRTFGATGSDLIQGTRSDMNW
                     QELQQDPQKQALHQHWQKLTQFRQRHPAIGAGVHQLIKNDSYFAFKRVLNEDKVMVVW
                     AGN"
     gene            complement(17088..19814)
                     /gene="malT"
                     /locus_tag="PXF40_000649"
     CDS             complement(17088..19814)
                     /gene="malT"
                     /locus_tag="PXF40_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HDL5802021.1"
                     /translation="MLIPSKLVCSFRLQNSIPRKRLIQELDKSCSYPVVLINAPAGYG
                     KTTLVSQWIENKKNIGWYALDEGDNNSDRFATYFSAALHSAINEEIDVLLEENRKANL
                     LALFNQLLIKAAAFSEHFYLAIDDYHIIENDEIHEALKYWIKHQPSNMTLILISRSIP
                     PLSIASLRVQEQLLEIDINQLMFDHQESTAFFQARLGSELNQQDVIALCNEVEGWPTA
                     LQLISLFAKNKSHTLQVPLQDIAKRLAKSNHFHINEYLADEVLNKVDEETRLFILRCS
                     VLHSMNESLVQAVTGEQNSRTKLESLEKQGLFLQQMANSKWQSSDDSWWKFHPLFASF
                     LNLCCQNELYAELPQLHQKAANAWLQLGYVTEALHHAMQLSDTGLLLNILSKHAWTVF
                     HQGELKLLEESLNCLDYAHLTEHTNLVLLKAWLVQSQHRHIEVGGILADFSRALTENK
                     IELSKTANAEFNVLRAQVAINSGDENTALQLASEALNDLSENAYYAHIVATSIIGEAH
                     HCHGNLAEALAMLQKAERMARQHHTYHNILWSQLQQSEILLAQGFSQAAYEMLDKASE
                     FVKENHLQKVPMYEFLLRSKGKILWEWYNLDKAESMAVAGMNALSKFEDKLQCLTLLT
                     KISLARGNLDNTARLLGEVEQLEHSHSYHHDWIANADQVRIFYWQMTNDVSAVRNWLI
                     QNPSPVSDKNHFTQVQWRNIARSRILLEEYHEAKAILDNLIETAEKFSLISDLNRALI
                     VRNRLYFLQGEKELAQQDLIQALKLTRQTNFISAFVIEGDVMAQQIRHLLQLNVLDEL
                     VLHKAQFILRNINQFYRQKFAHFDENFVNQLLKNPKVPELLKISPLTQREWQVLGLIY
                     SGYSNEQISDELQVAATTIKTHIRNLYQKIGVTNRNEAISYTKELLMLMGYH"
     gene            19978..22347
                     /gene="malP"
                     /locus_tag="PXF40_000650"
     CDS             19978..22347
                     /gene="malP"
                     /locus_tag="PXF40_000650"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HDL5802022.1"
                     /translation="MTFNSIVEKYCRYFDVTDPKHFTLQQWYQVVAEGSLELIYSQPA
                     TKPTESRHVNYLSMEFLIGRLTGNNLMNLGYYEQIRDYLKQYQVELVDVLEQERDPAL
                     GNGGLGRLAACFLDSMATVGQNATGYGLHYQYGLFKQSFKEGMQKEAADTWARDSYPW
                     HRFNPSKTRHIGFGGKIKHIQADQYEWQPKLTIQGKAFDLPIVGYKNNIIQPLRLWQA
                     DSDQSFDFDAFNEGKFLSADKTIVNAAALTQVLYPNDNHQAGQKLRLMQQYFHCACSV
                     ADILDRHISEGYSLEDLAKRQVIQLNDTHPTLAIPELMRVLLDEHQFTWEQAWDICSN
                     TFAYTNHTLLPEALEQWDQRLFKQLLPRHYQIVEKINDIFHDKVQAEFGDDAKIWEKL
                     AVLFDYRVRMANLCVVTCFRVNGVAEIHSDLLVTDLFPEYHKLFPTKFCNVTNGITPR
                     RWIRQANPQLSDLLDRTLKQDWTHNLELLKGVEQYADDTGFREEYQRIKRNNKVVLAN
                     EIHKTLGLNVNPNAIFDVQIKRFHEYKRQHLNLLNIIATYQSLKANPNQDYTPRLFLF
                     SGKAAPGYYLAKNIIHAINNVADIINNDKQVNDRLQVAFLPDYRVSLAEKIIPAADVS
                     EQISMAGKEASGTGNMKLALNGALTLGTLDGANVEIADMVGEENVFIFGHTVESVREL
                     LAKGYQPKAYYNQDPILKNAVDFLATGKASNGDKEAFKLMLDSLLERDPFLVFADFDS
                     YRQAQEKIGVAYLDQETWLRSAILNTARLGAFSSDRSIKDYQQRIWLNR"
     gene            22429..24507
                     /gene="malQ"
                     /locus_tag="PXF40_000651"
     CDS             22429..24507
                     /gene="malQ"
                     /locus_tag="PXF40_000651"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5802023.1"
                     /translation="MKITAKQYYRAGIMPYFFDERGVKKTASEKIKHSLFKAFNGNTQ
                     ARETPIPTVNIFYQHQPCFLPFHLADKKHPLTGTWQLQLENSNQIISGKIKARGITLP
                     QDLPLGYHQLQLKTVDKTFNCTIIIAPERCYQPQAVIEQKRLWGTFLQLYTLKSAHNW
                     GIGDFGDLKDFIQQIAPYQADFIGLNPIHSLFPANPNSASPYSPSSRRWLNIAYIDIN
                     QLAEFQQSDEAQTWFHSAEIQQQLSELRTQDWLNYEQIIPLKLKGLRFAFAKFQQNMT
                     ACAAPAFIEFVQKGGESLQVQATFDALHQHLSAQFADQWGWDFWEKAYQDYHSAAVQQ
                     FRETHKTDIEFYLWLQFVADQQLAECDAICRQQNMRIGMYRDLAVGVSPNGAETWNDK
                     QLYCLNASVGAPPDVLGPQGQNWGLTPMNPHVLKQQAYRPFIELVRANMSHCGALRLD
                     HIMSLLRLWWIPKGDSAVNGAYIRYPVDDLIAILALESQRHQCLIIGEDLGTVPKEIV
                     SKLKNAGILSYKIFYFEFDEQGKSRDLQHYPYQAMTTLSTHDLPTINGYWRGYDFELG
                     EKFGVYPNSNILAILKQDRVNAKAKILQRLQEHNVEIAPEISEQLNSPVNTAFIHCLQ
                     TYVANVSSGLFGFQPEDWLGMTEPVNIPGTSTQYANWRRRLSVNLEEIFTDKDIQALL
                     KEVNLIRKNQ"
     gene            complement(24572..26233)
                     /locus_tag="PXF40_000652"
     CDS             complement(24572..26233)
                     /locus_tag="PXF40_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HDL5802024.1"
                     /translation="MSEIALTVSLLSLVAVLGLWIGHIKIRGVGLGIGGVLFGGLFVS
                     HFMAQFDVKLDAHTLHFIQEFGLILFVYSIGIQVGPGFFASLKHSGLKLNGFAVLIVL
                     ISGILVILIHKFFNVPLPVILGIFSGAVTNTPSLGAGQQVLAELSAESVTEIMGMSYA
                     IAYPFGIIGILLSMWLIRILFRINIEAEAEAFNKQQNRSKDQLSTLNVRLTNPNIHGL
                     TLKQIPDFNLHEVAYSRLKRGNELSIPRVDTILQIGDILHLVGEESSLRKMQIILGEA
                     VDVSVSTKGTIYRSERAVVTNEKVFGKQIRQLMLKGKYDVVISRLNRAGVELVPTGDM
                     TLQFGDVLNLVGRQADIEMVMTIIGNAHSKLQQVQMLPIFIGIGLGVLLGSVPIYLPG
                     FPVALKLGLAGGPLVVALILARIGSFSKLYWFMPPSANLALREIGIVLFLAVVGLKSG
                     GRFLETLLSSEGVEWICYGAIITFVPLMIAGLIARMYNKVNYLTICGLLAGSMTDPPA
                     LAFANEIKEGNGAAALSYATVYPLVMFLRIMLPQVLAIMLWVSGG"
     gene            26451..27827
                     /locus_tag="PXF40_000653"
     CDS             26451..27827
                     /locus_tag="PXF40_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HDL5802025.1"
                     /translation="MLSNEVFISIIVLLILSLLRINVVIALIISALTCGLIGNLGVEG
                     AGFTEALEKTIKSFTGGLGGGAETAMNYAVLGAFAVALSKSGVTDLLAYKVIKSFGHS
                     PSGRSVTWFKYIVLFVLVAFAMSSQNLIPIHIAFIPILIPPLLSVMNKLQIDRRAVAC
                     ALTFGLTATYMLIPAGFGQIFIESILVKNINQAGEPFQLVTTTAEMTKAMLIPVSGMI
                     LGLLFAFFVSYRKPRVYIENMPEPTADDIEARVANVKPFHIGISIVAIIATCSVQLAT
                     NSTIIGGLVGLVIFALGGVFRLKESNDVFQAGLRLMAMIGFVMIAASGFAGVVNSTGG
                     VPALVESLRDVISSKEMAALLMLVVGLFITMGIGSSFSTVPIITSIYVPLCISFGFSP
                     LATMAIVGVAAALGDAGSPASDSTLGPTSGLNADGKHDHIWDSVVPTFIHFNIPLLVF
                     GWIAAMTL"
     gene            27925..28728
                     /gene="xthA"
                     /locus_tag="PXF40_000654"
     CDS             27925..28728
                     /gene="xthA"
                     /locus_tag="PXF40_000654"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HDL5802026.1"
                     /translation="MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPY
                     DLVNHLGYHVFHHGQKGHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGV
                     LTVLNGYFPQGENRSHETKFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLD
                     IGIGEPNRKRWLRDGKCSFLPEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSK
                     GFDDNRGLRIDLILASKSLAERCVETGIDLDIRAMEKPSDHSPVWATFK"
     gene            28882..29466
                     /gene="lptC"
                     /locus_tag="PXF40_000655"
     CDS             28882..29466
                     /gene="lptC"
                     /locus_tag="PXF40_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HDL5802027.1"
                     /translation="MNKRLTVILLIIVAVLGGWYYSLQEKENTGLDQLIKKEGQPEYV
                     GNKMSTTVYDLKGNPQYFAQATEIKRYESTERTEFFKPFIELFAKESTQKQWKVSADY
                     AEITKEKMLNLKGNIKLVALDPASRLQQITTDTLTVDLNTQDIFTESTVKSIGSGFTT
                     TGVGLKGNLKQQVATLQKDVKSYIEPTIIQETKE"
     gene            29490..29996
                     /gene="lptA"
                     /locus_tag="PXF40_000656"
     CDS             29490..29996
                     /gene="lptA"
                     /locus_tag="PXF40_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HDL5802028.1"
                     /translation="MKLMFKSILVSVLLGSSFSAYALKGDTDQPINIDSGSQSLDMTN
                     NIVTFSDNVVITQGSIKVTAANVKITRQEGKKETIDATGSPVTFQQTLDNGKPVNGKG
                     NSVHYDLNSEFLTLIGNAELKQQGSFIKANKITYDVKKQQLKATSGGKTRVKTVLIPN
                     ELQDNKKK"
     gene            30008..30733
                     /gene="lptB"
                     /locus_tag="PXF40_000657"
     CDS             30008..30733
                     /gene="lptB"
                     /locus_tag="PXF40_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005727816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HDL5802029.1"
                     /translation="MSVLYAEHLAKSYKQRQVVKDVSLNVKSGEIVGLLGPNGAGKTT
                     TFYMVVGLVRHDHGTIRIDDQDISTLPMHDRAKQGIGYLPQEASIFRRLSVYDNLMSV
                     LQVRKNINDKQRKERAEELITEFHIEHIRNSLGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKKIIVNLKERGLGVLITDHNVRETLDVCERAYIVGSGEMIAS
                     GTPQQVLENPDVKRVYLGDQFKL"
     gene            30775..31287
                     /locus_tag="PXF40_000658"
     CDS             30775..31287
                     /locus_tag="PXF40_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5802030.1"
                     /translation="MTKLTEFLSPENVRQGVLISSKKRALELVGKIVAESINQTEQQS
                     EALCPIECFGNLFKREKLGTTGLNQGIALPHAKLPACGDIELTKPIAVFLQLEEAIDY
                     EAQDNKEVDLIYAMMFPENSCEQYKSCLPAIAQKLTDKSLLKQLRAAESAEDIWQILV
                     YADNHLKDEE"
     gene            31300..32163
                     /gene="rapZ"
                     /locus_tag="PXF40_000659"
     CDS             31300..32163
                     /gene="rapZ"
                     /locus_tag="PXF40_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HDL5802031.1"
                     /translation="MELIIISGRSGSGKSVALRALEDAGYYCVDNIPLPLIPTLTYYL
                     TQENRSAVISLDIRNLPNTPNAIEELLTQLEPLNAKLIFLDCERNTLIRRYSDSRRIH
                     PLSTQDDLSLEGALDLEQKLLEPLVQNANYIIDTSHLSSHELAENLRQILQGSTEKEL
                     KIIFQSFGFKYGLPADSDYVFDVRFLPNPHWNPELRPMTGLEQPVIDFLERQTEVHNF
                     IYQTRNYLEMWLPMLEQNNRSYLTIAIGCTGGKHRSIFIAEQLAKYFQAKGKNVQVRH
                     KSLEKHHKKTS"
     gene            32246..33430
                     /locus_tag="PXF40_000660"
     CDS             32246..33430
                     /locus_tag="PXF40_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5802032.1"
                     /translation="MKSADIVIVGGGMVGLALAGLLKDVDCQIKIIEKNTPKFDADTI
                     YHRVSAINASSQKILEQIGAFQHIPAQRLSPYTEMKVWEKDSFANIHFDNNDNEIKQL
                     GLSQLGFILENAVIQHALWQQVSQQANVEYIIAAPQTLGVSENGAFLTLDNGEMLSAK
                     LVVGADGANSWVRNQMKMPLTSKDYQHTALVCNVKTTEKHGKTARQIFAEDSIFAFLP
                     MADEHLCSIVWSLPPNKANELKNASEAEFNKALTIAFDNQLGLCEVQSLREIYPLAAR
                     FCRDFAQPRIALIGDAAHTIHPLAGLGVNLGFADARTLANEIQKQLVNNQDIGEYRHL
                     RQFERERKAQAMKLLATMEGLKQLFDGNHPLKKLFRGIGLSLTNQLPFVKKQLIQQAI
                     YL"
     gene            33562..34146
                     /locus_tag="PXF40_000661"
     CDS             33562..34146
                     /locus_tag="PXF40_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein HlpB"
                     /protein_id="HDL5802033.1"
                     /translation="MNKLTKISATALVALFLAACDKPAEKAPATEPTKTTEAAPTTTA
                     PAAEAAKPAETAVAAPSEAAKADYQKLVDWNTAQESTMATAQAELQKKLATQDPKQIQ
                     EGLSAFNKKVEETVKSLDAIEVSDAQIKTFKEKTKSVLTLSSEVISEQVKTISTPNDQ
                     AALQAVQQKAQSLIEAGNELQKLNVELQQRFSAK"
     gene            34213..>34759
                     /locus_tag="PXF40_000662"
     CDS             34213..>34759
                     /locus_tag="PXF40_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein Hlp"
                     /protein_id="HDL5802034.1"
                     /translation="MNTLAKISLSVLFTLFLTACEQPNSTKTQSSAESPVQVKEESKE
                     EVKPADTGAQDYKMLREWQDTQEKALNDAIKAATETLTDKQKADSTLMQETVNNALLA
                     QIDHIKISAETLNIQNNEVKALKDKTLEVLTLGAQMIVEGAKMEKNPTPEAHKAFGEL
                     QTKLNQLAEEGQQLENILRAKY"
BASE COUNT        10749 a         7118 c         6614 g        10278 t
ORIGIN      
        1 aaatggtttt aaataaaatt aaaaataaat tgtaaatttt tatttaccaa gatttttagc
       61 aaagttttca ctaaaaatga ccgcttgcag gcaataaaaa agtgcgtttc cgcacttttt
      121 actaaaatga tttaattact caaccaatgc tcaccgttgc cattagctgg tggattaatc
      181 ggttggttat tattcttacc tggaataata atttgaggct gatcgtacat acatttgttg
      241 ttcgacaata tatcacaggg aatagcacat acggcagggg cagaaagaag acaacttgaa
      301 ccaccttttt gattacaatt ctctaatgca ttttcttcag caagactact aacgatacca
      361 tacccaaaat cctcgaagcc ttgaccatct ttataacctt gtgcaaaagc aaggcacata
      421 ttactaaacg ataagatcat ttggcaatta cgaccaccgt tcttttcaca ctgtttaaac
      481 gcatcttgct tcgcattttc taaattttta gacgtattat cagtcaccca catcatattt
      541 tgttcaggtg acatataaat tgatgaccat aaacgaggct gtgttttacg ctttgctaag
      601 tcctctttac tggcaatggt taccgcttct ttatattcac cacatttaaa ctctttttcg
      661 acatcaccaa aaccattcat ttcacgaaca gaagtgattt tattatcagc gtcagcaaaa
      721 agatatgtcc aagtcgatcc acctgtataa accttatctg ttgtcataaa tatagtggtt
      781 gcattacgac caacttcata agtttgcaaa ttatacaaag ctagttgaat aaccataaac
      841 atagcttaat tcattatctt ttacgcattg aaccgctgta tcaggtaaac gtttacgtgc
      901 aaaaaattca gatacatctt taccacgcca ataaacacta tctagtggct taatcattgt
      961 agaacaagcg gtcaaaaata atgacaaaat aacaaatagc aaagaactta ttttgaaatt
     1021 tataataatt acctcaaaag aaaaaagagc aagctttcac ttgctctttt tatgttactt
     1081 agaatagcgt tggaacacta aacacgcatt agtaccacca aagccgaagc tgtttgacat
     1141 cacggttgtt aatgctttgt cttggcgttc agtcacaata ttcatacctt gtgcttgttc
     1201 atcaagggtt tcaatattaa tgcttggtgc aataaaatta ttatctaaca ttaataatga
     1261 ataaattgcc tcgtgcgcac ctgctgcacc taatgagtgt ccggtcattg atttggttga
     1321 tgaaattgct ggcgttttat caccaaagac attacggatc gcccctaact cttttacatc
     1381 acccactgga gtagaagtgc cgtgtacgtt aatatactcg atttcaccat ttacagttgc
     1441 catcgcctgt ctcatacaac gctcagcacc ttcaccactt ggcgcgacca tatcgtaacc
     1501 gtctgaggtt gccccatagc ccacaatttc agcatagatt ttggcaccac gagcaagagc
     1561 gtgttctaac tcttccacca caaccactgc accaccaccg gcaatcacaa aaccgtcacg
     1621 attagcatca taagcacggc tagcttttgt tggtgtttca ttatatttag ttgaaacagc
     1681 acccattgca tcaaactcgg ttgcacattc ccaagaaagt tcttctgcac cacctgcaaa
     1741 caccacatct tgtttaccta attggattaa ctccatcgcg tgtccaatac agtgtgctga
     1801 agtcgcacaa gctgagctga ttgaatagtt tacaccacga attttataag gtgttgccaa
     1861 gcatgctgac acacttgatg ccattgtttt ggttactgcg taaggcccaa cggctttcac
     1921 accacgtggg ccacgtactg catcacaagc tacaagttga ctgtgcgccg agcctgtacc
     1981 agctccgatc accaaaccgg tacgatcgtt tgaaacttgt tcttcggtta agcctgagtc
     2041 ttcgattgct tctttcattg aaagataagc gtaagccgca gcatctccca taaaacgata
     2101 gattttacgg tcaattaact cagccggatt taatttaatc gtacctgcca cttggctacg
     2161 catacccact tcagcaaact caggcacaaa ttcaatgcct gatttacctg cttttagtga
     2221 ttccaacact tcttctttgt tgttaccgat actggaaatt acacctaatc ctgtaataac
     2281 gactcttttc attttgtttc cttcatcatt ttgatctgaa aaatacttga ttcagcttac
     2341 acttgttcac tcaaataagc tactaaaact tgattatttt acacaatttc attactggtc
     2401 tgaactcttt ctatcaagat agcggttgaa tttcagacat tttttgcaaa atagggaatg
     2461 aaatttaatt tcccgatttt ttaccctatt acataataat cacttttccg ctaaaatgct
     2521 aaacagttca cactttagta aggaaagctg acgtgaaaac attaaccctg acagccaaca
     2581 aaataacagc cgtagaaggc gctgccattg gggcgaacca ggggagcttc gcccaaaaat
     2641 taaactctac taaagcacga attgatcaac ttaatgcata ccgaatagaa cgagctatca
     2701 atgctaataa tcatcatttt atgcatgttt tctctctcat tccattgctt attcatctta
     2761 atcaccctgt gttaccggct tatgttgaaa atgcaccaca agggatttgg cattttcaac
     2821 tctctgatta tcaaaaacaa tttctggttt cttaccgttt tgatgaagca atctctgccg
     2881 atcatttggg cccccatccc agctttgatg ctctttattc gatgggtagc accggtacta
     2941 ttacccaaac aagctgttct gatttagatt tatggctatg ctatccgaac cattttacaa
     3001 ttgaacaata taagttaatg gagctcaaaa ttaataaatt gcaagaatgg gcaaagacat
     3061 tccaaatcga catcaatatt tatttaatga acccagaaca atttaagagc caaacttata
     3121 acagtagcgt aaccgatgaa cacagtggtt cagcacagca tttttttcta ttagatgaat
     3181 tttatcgttc agctatttta cttgccggta agcgtttact ctggttgcat ttacataaaa
     3241 atgaatacca aaatgttcac aataaccctg aaattgactt aacggaatgg attgatttcg
     3301 gcgatttttc cagcctttca accagtgaat tttttggtgc aagcttatgg cagctctaca
     3361 aaggaattaa taacccttat aaatcggcaa ttaaaatttt attgctcgaa tgctacgctc
     3421 acacttatcc taaaacaaag ctcatctcca aagaatttaa gaaaaaacta ctaagtgaca
     3481 atgctttgga atatcacttt gatccctact tagccatgct tgaattggta acagaacact
     3541 taagatcacg caaagagtgg gtgaaattag accgcttgcg agtctgtttt tatgcaaaag
     3601 cggttgaggg agaaataaat aacaactgga gaagtcgtga tttagacgag ctggttaacc
     3661 aatggtcttg gtcagaaaaa caaattcaat tacttcaaaa ccgtcaacat tggaaaatta
     3721 agcaagtgat gaatcatgag aatatgctga ttgatcattt actacaaagt tatcgaaatt
     3781 taattcattt tgctcgaaaa tttcatatta atccgagcat tatgacaaat gatactgata
     3841 ttttaatgcg aaaactttat tctgtatttg aagcacttcc aggaaaaata tctttaatta
     3901 atcataaaat atcgtccaat ttagcagaaa aagcaattac atttattgaa gctaaagttg
     3961 gatctgcgtt acaacccggt tggtatttag ttaatcaggc acctaaaagt cgttatgact
     4021 ctgaaaatcg ttatgtccat tataataaaa gcccgattaa gcttattgct tgggggtatt
     4081 ttaacggcat tattaacgca gcaactaatt tacatactgt tagccctaat ttagatatcg
     4141 agaaattgcg acaatttatc accgacttgc gcttatcttt cccaattcaa gcgccggaag
     4201 tgaccaatga tgacatgcat caccctaatg aaattcgcaa tttggttata gcgcttaatt
     4261 tagtacaaga tccaaccgaa catatcgatg aactaccaaa aaaagtttat ccaagcgatc
     4321 tgtttaattt tggtaaggca caaaaaacgt tagttggtag tgtgagcatt atttatcgaa
     4381 atgtatggaa tgaaattcga actcaacatt ttgacggtga agatgctatt ttaaaagcac
     4441 taaaattggt atccaatcga atttatcaag gaaattcttc acctcaatca gttaatgttt
     4501 tttgctatag taaatatcta cgtagtgagt tacgtgattt tgtggcagat ttagttcata
     4561 aatgtattac aattcagact ggttgtttac tgcaagagaa tgaatttagc actttaaaag
     4621 tagcaggaaa aacctggcag tttctttttc ataaaaaaac atttagcatt aaacaaattg
     4681 atgaacaaca agcggttgaa aatttaaatt cttttgcaaa aaccaagcaa aatgctaaaa
     4741 gcgaaaatga aaagaaaaaa gaatttccgc agcaaattag tgaatttgcc agtgaaggct
     4801 ttttacagtt tttctttgaa gacaatgtcg ataatagttt taatgtatat gttgtagatg
     4861 aacgtaataa tgtcgaaagt tactataact gtttcggcaa taaagaagag aaaatcagga
     4921 aaatcaataa attacaaaat gaaaaacaat taaaaacaga aacaccagca tcatttggaa
     4981 gctttaatca tccacaattt tatcaactta tttcaccaaa cggtgagtta tgtattgtgc
     5041 cgtttcaaag ccgccagcat ttagattatt tagcacaaaa acatcattaa tcttatttat
     5101 attatacagg tgggaattct atgtcaggat tagttagtcc ggaattaatt aaaacagtcg
     5161 cattacttgc aaccagcgtc actattgtac cgctatttaa acgccttggt ttaggaagcg
     5221 tattgggtta tttagtcgca ggatgtttaa tcgggccatc gggcattgga ttgttccaag
     5281 accctgccgc tgttgtgcat atggcagaac ttggcgtggt tatgtttttg tttattattg
     5341 gtttggaaat gcacccggaa ctgctttggg cgatgcgtaa agccatcttc gggcgaggtt
     5401 tcttacaagt tgcgatttgc ggtactttat taaccttagc cggcatttac ttattaggtt
     5461 tttccaaaga agtggcattt attgccggta tgggttttac gctatcttct actgccattg
     5521 taatgcaagt gctggaagat aaagggataa gttccacgcc aaaagggcaa cgtattgttg
     5581 caactttact atttgaagat ttagcgattg tgccattatt agcctcggtt gcctttcttg
     5641 ctcctaacca agtagatgct gaatccagta ctaattggtc tgctattggt cttagcctag
     5701 ttgccgttct tattttggtt gcgagtggaa aatggctgat gaaccctatt ttccgtgtta
     5761 tttctaaagc caaagtacga gaaatgatga ctgccgctgc cttacttgtg gtattaggct
     5821 ccgctctttt aatggaaatc agtgggcttt caatggcaat gggggcattc cttgccggag
     5881 taatgctttc ggagtcttct ttccgccatc aactagaagc tgatattgaa cccttccgtg
     5941 gtttactttt aggcttattc tttatgggcg taggaatgtc attagacctc agcctcgtcc
     6001 tcaataattg gctatggtta ttggtgattg tagcagttta tgttatcggt aaaggccttg
     6061 gaatcttcat tgctgcctct atcacccgat taacactgaa tgaatctatt gtgcgaacta
     6121 ccattatggc tcacggtggt gaatttgcct ttgtgctatt ctcagccgcc gcaaccgctg
     6181 ggattttaac cccagatact cacgctacct taaccgctgc ggtaattgtc tcaatgttgc
     6241 tttccccact tctcatttta atcaagcaag gagtgagaaa gaaaaaagcg aaaaatgaat
     6301 ccactaatat gacaggggtt gaattaccgg aagatttaga agccaatgta ttagtcatcg
     6361 gttttggacg ctttaaccaa atagtctgcc aagccttatt agccaaagga ctaagtgtat
     6421 cggttattga ttcaaatact gatcatattc gtgctgctgc tcgttttggt tttaaacttt
     6481 actatggtga tggagcgaga ctagatgtac ttagggcatc tggcatcgcc aatgcaaact
     6541 gcgtaattgt tggcgtaggc aatccggaaa gaacggagaa aatcgtagag ctgattaaat
     6601 ctgaataccc cttagtacct gtatttgcga gaacctatga tagacaaagt gcggttgatt
     6661 tagtcaaaaa gcaccacgtt gattatcaca ttcgagaaac ctttgaatca gccctcgcat
     6721 taagccaagc cgccattgaa cgcttaggtt ctagcgagga agaggcaaaa caaattatca
     6781 gctatgttcg ccgattagat gcagaacgct ttaatgagga attattacac ggtttctccg
     6841 cagaagttat ccgcaaatat tgggtaccaa caccttgggt aaatccacaa cacgaaggta
     6901 gtgcacttaa tgaagaaacg gctgatattt tagaagagct tggtgagaca gtagaagtta
     6961 taaaagtgga tatcactgat aaaaattaaa gaatttatac tttgaatcct tattcaagta
     7021 taagccttcc tatacatatc gcataatcac tcgtaaaaaa gcaccctatc ggcataatct
     7081 gatagggtgt taatggtaat aaaccatcgc acgatgacaa ggagaatatc tatgaaaaaa
     7141 acaataaatc aatttgaact tacatttttt aagaaaattt ggcgtggaga agtcagccct
     7201 aatttttctg cctcgttaac caaattcatc gctttattaa tatcttttgc tttaatcgct
     7261 ttcattaccg cctgattaaa ataggcttcc gtatctttat ctactgctgt ttttactgca
     7321 actggatttt cttttatcgg caacggtata gccgttttag ctgccggcgt tgctgctttg
     7381 tttgagctga aaatttcagt cggtaatcca ataaatttag tgccgttcga gccggtaacg
     7441 ttgatgtgaa tttgcccttt taaactgtgt gctacttcaa tatcgttaat tgctggtggt
     7501 tgtttaccgg ttgcttttgc ataggttttt gccggatgcg gcatcatcgt ggttttggct
     7561 aaatcttgct gcgtggtata aatgagcaag taaatataat cttggttcat tgccggcgtt
     7621 aaattaagtt ctgcccctaa acggctacct ttgagtcctc gctcttccaa taatttaaac
     7681 tcagaagagg ggtaagttga tgccacatta aattgactat ccaacacgac tgccgtgggt
     7741 acaaaaacat ttttgtccat caccgggctt tcgatttcaa tttccaatgt gccttgattt
     7801 gccggaatac gataagctgc aaccgggctg gcaataccgg caaacgctgt ggtaaatgct
     7861 tgtttgtgtt gctcgcttag atctgttttt acggtttgtg aaaatggcac atcttgccat
     7921 tgaatttgag ctaattcagc cgagttaata tgaatagact tacctgccga gccatttgct
     7981 atactcggag acaccaccaa aagatgggcg aagaatattg ctgtcgaaag aagcgttttt
     8041 ttcatattaa cccctaaaaa tcgtgaaata ggataaagtg ctgaaatagt gggtaggtaa
     8101 tcctacccac acaaaggttt gatgattacc accaagcttc aaattgaaca ccggtgataa
     8161 actcgccgtc tttggcttta tagccggcat cggtacgagc tttcgtgttg aatttatcat
     8221 tccaacgtgc ataagtacca aacacacgga ttgcagggcg agcccaaatg ctattaccag
     8281 cctgccattg ttgtgcaacg gtgtatttta ccaagtcatt tttcttgcct gttgcttgat
     8341 ctttaatgcg atcataacca acttctaata atgtactcat tgtatcattc catttgtaca
     8401 ttgggcgaat acctgctgag taccaagttt taccttgttt attatctagt tttgtttttt
     8461 cgtagattaa ggcatacatt acttcaactt tatcactcgc ttgcactacc ccttggttga
     8521 ttaaacgaag catattacct ttattatctg ctttcgaacc ctgtgcgtgc ccattattcc
     8581 aagaagtcat agagtcggtt gcatattgtg cagtaaattt attgaaacca ccaaagaagt
     8641 taccttgagt gtattccgct gttaccatat aaccgttttt ggttgctcct ttttcaaggg
     8701 ctgcaccttt cttagcatgt gcattaccgt aatcaaagcc taactctaac gaaccatctt
     8761 tccaaagctc aataccggct aaccgaacat caaaaatatc gttgtaaaca tcggctttat
     8821 tacgctgctt atctaattta attttacctg tgctaggatc taatttataa actgtagtat
     8881 atccaaaagt attcgcccct ccacgctctg tatcacgagt aaccgctaaa gagagttttc
     8941 cgaagcctaa atcaatattt tcaacccctg cacccggacc tgaaatatcc cagtaataga
     9001 agtcattcat atgtacatca tggcgttggt aaaaacgttt accagcccat aaggtggcac
     9061 ctggtaaact atctgcaaag tttttgaact gtacatttaa ttcacgtagt gctggacttg
     9121 ttggtgtcca atcattattg tgaagcgtac cgccgtaagc aaggtttgta tcaaagtaga
     9181 tagatttctc accacttttg aataattcct gacctaattt caattctgca taggtatcag
     9241 attcgttacc taaacggtat tttgaaccac caccatttac cgtgaatgcg gattgctccc
     9301 ccccccccga tgtccaaccg atacctgaac gtgcatatcc gtggaaatca accgctgatg
     9361 cactggctgc gaacattgca ccactgattg caactgctag gactgttttt ttcataatag
     9421 aacctctctt aagatttgat tttacttagg ttaattatta attgattaga agattgaaaa
     9481 taccctctaa aatcagtaat aaactgaaat tgttataccc ctttttcaac aaacaaacgt
     9541 ttgcaagctg taccgtcttc cttaaataaa tggcagcgtt ccggcaatat accgatattc
     9601 agatcgtcgc cttcattaac taataccaca tcgttttgac gataaattaa ggttggttgt
     9661 ttgatttcag ggatttcaag gtggatttgt gtttcatttc cgagcaattc cacaacttgc
     9721 acaataccgt gtaaggtcac ttgggtttga tccgaaggaa ctaaatgttc cgggcggata
     9781 cctaaagata agttatctcc cacattcacc ccttcgccgg aaaccggaat ccaaaaatta
     9841 tgatgattcg catcaggtaa ctcaattttt acccgttccg gctctaccgc aatcactttt
     9901 accggtaaaa agttcatttt aggcgagccg ataaaccctg ctacaaagcg atttgccggg
     9961 taatgataaa gttctaacgg tttacctact tgagcaatac cgccggcatt taataccacg
    10021 attttgtccg ctaatgtcat tgcttcaact tgatcgtgcg taacataaat cattgtgcgg
    10081 tttagttttt tatgtaattt ggaaatttct acccgcattt gtacacgcaa tgcggcatca
    10141 aggttggaaa gtggttcatc gagtaaaaat acttccggtt gggaaaccag tgttctacca
    10201 atagccaccc gttggcgttg tccgccggaa agtgctttag gttttcgatc taataaatgg
    10261 gcaagctgta agatttcggc aacttggtta actcgttgat cccgctctgc tttacttaca
    10321 cctgccagct ttaagccaaa agacatattt tcggcaacgt ctaaatgtgg atagagagca
    10381 taggattgga acaccatacc gataccacgt tttgaaggct ctacttcatt catcagtttt
    10441 ccaccgatat agagttctcc tgtcgtaata tcttccaaac ctgctatcat tcgtaatagc
    10501 gtagatttgc cacaacctga cggtccaacg aaaacaacga attctccttc gttaatttct
    10561 aaattaatat ccttagagat atgaacatca ccatacgatt ttcccacgtt acgtaatgat
    10621 acattcgcca taactaaacc tcttttctgc ttttgcttgt tggttttatt taggctgaat
    10681 agtcgccttt ttatctaaag aagaaatcat cctaaaatac ttttttttag gctgaatagt
    10741 cgccttttta tctaaagaag aaatcatcct aaaatacttt tttttagggt tagagccata
    10801 gccataatta tttaaaaaac gccaattcag aaaaattaaa taaattttgt gatcaacctc
    10861 tcatttttaa tgcctatttt tgtgaagcag atcacaaaat gataaaaaat gttacttaga
    10921 tcatactttt agcttggggg gcgtagagca aagggtgatc tcaaatagat tgtatagccc
    10981 ataatttgcc ataatttaat aaatgggttg tttcatatcc gtttctttta tttaacttca
    11041 aggagttttt tatgaaaaac aaatgtgtca aattcacctt agctactctt gctaccttag
    11101 ttctttcagg aacagtaatg gcaaaaatga cggaaggtaa actcgttatc tggattaacg
    11161 gtgataaagg gtacaatggg cttgccgaag tcggtaagaa atttgaaaaa gataccggtg
    11221 ttcaagtttt agttgaacac ccggatagac ttgaagaaaa atttgcacag gttgcctcaa
    11281 ctggtgacgg tccggatatt atgttctggg ctcacgaccg ctttggtggt tatgcacaat
    11341 ccggtttatt ggctgaagtg aatgtaagca aagaatttaa agataaattt gtcgattttg
    11401 cttgggatgc tgaaacttac aacggcaaaa ttatcggtta tccggttgcg attgaagcga
    11461 tttcattaat ttataataaa gatttagtga aagaagcacc aaaatcttgg gaagaaatta
    11521 ttgagttaga taaaaaactc aaaaaagagg gcaaaaatgc cattatgtgg aacttatccg
    11581 agccctattt cacgtggccg attgcggctt caaacggagc ttatgcattc aaatttgcta
    11641 acggcaaata cgatccaaaa gatattggtg tgaacaatga aggggcagta aaagcactac
    11701 aatttgtagt cgatatggtg aaaaataaac atattagtgc ggatatggac tatgccgttg
    11761 ccgaagcctc ctttaataaa ggacaaagtg ccttaaccat caatggtcct tggtcttggg
    11821 gcaatattga taaaagcggt attaaatatg gtgtaacttt actcccaaca ttaaacggtc
    11881 aagcttctaa accattcgta ggggtgttaa gtgccggtgt aaacagctca agcccaaata
    11941 aagatttagc caaagaattc ttagagaatt atttactcac cgacgacggt ttagatgcag
    12001 tcaataaaga taaaccttta ggtgcggtgg cgttaaaatc ttaccaagag aaattagcgg
    12061 ctgatcctcg tattgctgca acgatggcaa atgcgaaaaa cggtgaaatt atgccaaata
    12121 ttccgcaaat gtcttctttc tggtatgccg aaaaatctgc tatcaataat gcagtgaccg
    12181 gtcgtcaatc ggtgaaagaa gcattagatg atgcacattc acgcattcaa aaacaacaat
    12241 aattcttcat cattctgagt gggttattat gacccactct atttttagat tcaccctaaa
    12301 tacaataaaa gtacagtaaa agtaccgtaa caaaatgcag taaaaattcg aggtgctgtt
    12361 atgctaactc aaactcaatc caaatccact cattggctca aatatctctt agccggatta
    12421 gtcttgctcc ttgacttcta tcttgttgtc ttaatgtact cacaaggtga atatcttttt
    12481 gctattttaa cgctgattat tctaacttcc ggtgtctata tttttaccaa taaaaatacc
    12541 tatgcttggc ggtatgttta ccctggcatt accggaatgg caatttttat tttgtttccg
    12601 ctggttgcga ctattgcaat tgcgtttacc aactatagtg gttctaatca attatccttt
    12661 gaacgagcgg tatccgtctt aactgaacaa cgctattttg ccggagataa atatcaattc
    12721 accctttatc cgcaagcaga taataaatat caaattgcat taaccaatcc gacgacagag
    12781 caaacttttg tgtcagagcc gatttcattg gctaccggaa cgaatgtggt tgtaaccgag
    12841 caaaacagac caactggcga agtcgctccc cttaaagtga ttacgcaaaa tcgggccgca
    12901 cttcaatcaa tgaaagtggt tttaccgaat aataatgaac tgacaatgag ctcattacgt
    12961 caattctccg agcaaaaacc acgctatcaa tttgatgaag aaaataaaat attactcaat
    13021 aatgagactg gcaaacgtta tcaagcaaat gacgaaaccg gtttcttcca atcgattgat
    13081 gaaaacggtc attggcaaag cgaaacactt gaaccaggtt atactgtcac atcaggcttt
    13141 aataacttca ttaaaatttt taccgatgaa ggtattcaaa aaccttttgt ccaaatattt
    13201 atttggacgg tgatcttctc tttattaacc gttgtcttta ccgttattct cggtatggtt
    13261 cttgcctgtt tggtacaatg ggaggcatta aaaggtaaag cagtctatcg tgtcttattg
    13321 attttacctt atgccgtacc atcatttatt tcgattctga tttttaaagg actatttaac
    13381 caaagttttg gtgagatcaa tatgatttta aaccaactat tcggcatcag ccctgaatgg
    13441 tttaacgatc cgctccttgc caaagtgatg atcttaattg tcaatacgtg gttaggttat
    13501 ccttatatga tgattttatg tatggggtta ctcaaagcta ttccggctga tttatatgaa
    13561 gcctccgcaa tggacggtgc ttccacttgg caaaacttca gtaaaatcac tttcccatta
    13621 ctgttaaaac cacttactcc gttaatgatt gcttcgtttg catttaactt taataacttt
    13681 gtattaattc aactattaac aaacggtcgc ccggatatga ttggaacaac cactccagcc
    13741 ggttataccg atttattagt cagctacacc tatcgtattg cctttgaagg aagtggtacg
    13801 caagatttcg gcttagcagc cgccatcgca accattattt tcttattagt cggtggcttg
    13861 gcactcttaa atatcaaagc aaccaaaatg gaattataaa agcgggaggg atttaacaat
    13921 cccgacccca aactaacttt aggagttata tatggcaatt gttcaatcta aatctgtgcg
    13981 ttatcgggta tgggcaaccc atttcatctt aatctgtttc cttgccttaa ttattttccc
    14041 tttattaatg gtgattggca tttcgttacg accgggaaat ctggctatcg gtgatattat
    14101 tccaagccaa atttcgtggg aacattggca agccgctctt ggttttgatg ttacacacgc
    14161 cgatggtaca gtcacaccgc cgccattccc ggtgctacgc tggttatgga actccatcaa
    14221 agtggcaaca attacctcta tcggcattgt aaccttatct acgacctgtg cttatgcatt
    14281 tgcccgaatg aaatttaaag gcaaaaaaac cattctacaa ggtatgctga ttttccaaat
    14341 gttcccggca gtgctttcct tagttgcctt atatgcgttg tttgatcgtc ttgggcagta
    14401 tgtaccgttt cttggtttaa acacacacgg tggtgttatt tttgcctact taggcggaat
    14461 tgccttacac gtttggacaa tcaaaggcta ctttgaaacg attgatggtt cattggaaga
    14521 agccgcttcc cttgatggtg caaccccgtg gcaagcgttc cgattaatct tattaccgct
    14581 ttcagtgccg attttggcgg tagttttcat tctttcattt attgccgcca ttaccgaagt
    14641 accggttgcc tcactcctat tgcgtgatgt aaacagctac accctagccg ttggtatgca
    14701 acaatacctc tatccgcaaa actatttatg gggtgacttc gcagcagcgg cggtcttatc
    14761 cgcaattccg attacgctgg tcttcttatt ggcacaacgc tggttaatcg gtggtttaac
    14821 tgccggcggc gtgaaaggct agtttgcaaa aaattctcta aaaacgaccg cttgtcgagc
    14881 tgatactgcg gtcgtcaatc tttattaggg ctgtctatga aaaatgcgtt accttatctc
    14941 tgcttattct atacctcaag cctttttgcc caatcttggc aacattccca tttttctgat
    15001 tttaacgatg atctcgaaaa acattttttt caatcccaag ttcaattgga aaaagggagc
    15061 tatccgctta ggttcaaatt tggcgaacaa tgttatcaac cccaacaagc gataaaatta
    15121 aatcaatcgg ttgcgttagt cccttgtata aatgaagctc cacaactgcg gttgtttcgt
    15181 caaggcaact atctggcaca aattgatctg cgaagcggca ctccgacacc cacaatcagc
    15241 gtagaacagc agctacagca caatgaagcg atgtttcaaa gttgcccgaa ttgggataaa
    15301 aaaccgattg aaattgatgt ttcttccact tttgccgaag gcgaatcggt tagcgatttt
    15361 tattcaggca acaccgctat cgttaaaaac ggcaaagtca ccttaatgcc caatgaaaac
    15421 gcaagcggtc tgattttgct ggaaaaaagc aataccgaaa atacggcaac gtttgattgg
    15481 aaaaatgcca ccgtctattt tgtgctgacc gaccgctttt ataacggcga tccgaccaat
    15541 gaccacagct accaccgcca aaaagacgga atgcaagaaa tcggcacctt tcacggtggt
    15601 gatttaaaag gattaaccga aaagctcgat tacctacaac aacttggggt aaacgtattg
    15661 tggattagct ctccgttaga acaaatgcac ggctgggttg gcggcggtga taagggggat
    15721 tttccgcatt atggctatca cggttactat catttagatt ggacgaaatt agatgccaat
    15781 atgggtactg aagacgattt aagtcgcttt gttcaacaag cccaccagcg tggtattcgg
    15841 gtgctatttg atgtggtgat gaaccatacc ggctacgcga cgcttgccga tatgcaggag
    15901 tttaactttg gcggatttta cttaacaccg gacgaaatta gccgcacatt aggcgaaaaa
    15961 tggacacact ggaagccgaa atcaggacaa aattggcaca gtttcaatga tttcattcgc
    16021 tttaacgata atcaggcttg gcaaaattgg tggggaaaag aatgggttag agctgatatt
    16081 gccgattacg acagccctaa atttgatgat ttaaaaatgt cgctcgctgc ccttcctgat
    16141 ctaaaaaccg agagcgaaca agcggtcaaa ttacctgaat tttttgcaaa taaaaatacc
    16201 aatgccaaaa cattaccaaa cgccaaagtg cgtgattatt taattggttg gttatccgat
    16261 tgggtcagaa aatatggcat tgacggtttt cgggttgata ccgccaaaca cgttgaaaaa
    16321 tccacgtggc tggtattaaa acaatcggca caacaagcct taaacgaatg gcaaaaagcc
    16381 aatccgaacg ccggttttaa cgatcgcttt tggatgacag gagaagcgtg gggacacggc
    16441 gtgttcaaaa gtgactatta tcaaaacggt tttgatgcaa tgatcaattt cgattttcaa
    16501 gatcaggcta aacaagggtt aaattgcttt gcccatattg agccgattta tgccgaaatg
    16561 aatcgcaaat taagcgactt caatgtgttg agctatttat cttcacacga tactcgatta
    16621 tttttccatt cggatagtga acaaaatatc gaaaaacaca aaaccgccgc aaatttgctg
    16681 ttgctttcac ccggtgcagt gcaaatctat tatggtgatg aaagtgggcg gacatttggt
    16741 gcgaccggtt cagacctgat acaaggcacc cggtcggata tgaattggca agagttgcag
    16801 caagatcctc agaaacaggc attgcatcaa cattggcaaa aattgacaca attccgccaa
    16861 cgccatccgg ctattggcgc aggtgtccat caactcatca aaaatgatag ctactttgca
    16921 tttaagcgtg tgttgaatga agataaagtg atggtggttt gggccggaaa ttaaatctac
    16981 tttagcttca agttttctct cttctgggga aaacttgaag ccggttcggg gaaacaagtt
    17041 gcaaaaaatt actaaaaata gaccgcttgt tccccatgag cttgtgatca atgatacccc
    17101 atcaacatca gcagttcttt cgtatagctg attgcttcgt tacgattcgt cacaccgatt
    17161 ttctgataaa gatttcggat atgggtttta atcgtggttg cagccacttg caattcatct
    17221 gaaatttgtt cattgctata tccggagtaa atcaaaccca atacttgcca ttcccgctga
    17281 gtgagcggac taatttttaa gagttccggc actttcggat ttttcaataa ttgattcaca
    17341 aagttttcat caaaatgggc aaatttttgg cgataaaatt gattgatgtt gcgtaaaata
    17401 aactgtgctt tgtgcaatac cagttcatct agcacattaa gttgcaataa atggcggatc
    17461 tgctgtgcca ttacatcccc ttcaatcaca aacgcactga taaaattcgt ttggcgggtg
    17521 agttttagtg cctgaattaa atcttgctga gccaattctt tctcgccttg taaaaaataa
    17581 agccggttac gaacaattaa tgcgcgattt aaatcgctaa tcagagaaaa tttttcagcc
    17641 gtttcaatta aattatctaa aatggctttc gcctcgtgat attcctcaag caagattcga
    17701 gaccgtgcaa tatttcgcca ttgcacttgg gtaaaatgat ttttatctga aaccggtgag
    17761 gggttttgaa ttaaccagtt cctcaccgca gaaacgtcat tggtcatctg ccaataaaat
    17821 atacgtacct gatcggcgtt ggcaatccaa tcgtggtgat aagaatgaga atgttctaat
    17881 tgttcgacct cgcctaataa tcgggcagtg ttatccaaat tgcctcgagc caacgagatc
    17941 ttcgtgagta aagttaagca ttgtaactta tcttcaaatt tagataaggc attcattccg
    18001 gcaactgcca ttgattcagc tttatctaag ttataccatt cccataaaat cttgccttta
    18061 gaacgtagca aaaattcata catcggcact ttttgtagat ggttttcttt cacaaactcg
    18121 cttgctttat ctaacatttc ataggctgct tgtgaaaacc cttgggcaag caaaatttca
    18181 gattgttgaa gctgtgacca caaaatattg tggtaagtat gatgctgacg tgccatacgc
    18241 tctgcttttt gcaacattgc taatgcttct gccagattgc cgtggcaatg atgagcttcg
    18301 ccaataatag acgttgcaac aatatgagca taataggcat tttctgaaag atcgtttaac
    18361 gcttcagacg ctaattgaag tgcggtattc tcatcaccgg aattgatagc aacttgtgcc
    18421 cgtagcacat taaattccgc attggcagtt ttgctcaatt caattttatt ttcagttaat
    18481 gcacgagaaa aatccgctaa aataccacct acttcaatat ggcggtgctg gctttgtacc
    18541 aaccaggctt tgagtaacac caaattagta tgttcggtta aatgggcgta atctaagcaa
    18601 tttaagctct cttccaataa tttgagttct ccttgatgaa acaccgtcca agcgtgtttg
    18661 ctcaaaatat tgagtagtaa tccggtatcc gataactgca ttgcgtgatg taaggcttct
    18721 gtaacatagc ctaattgtaa ccacgcattc gccgcctttt gatgcagttg cggtaattca
    18781 gcatataact cattttggca acataaattt aaaaaggaag caaaaagcgg atggaatttc
    18841 caccagctat catcactact ctgccactta ctgtttgcca tttgttgtaa aaacaaacct
    18901 tgcttttcga gagactctaa tttggtgcga ctgttttgct cccctgtaac agcctgcact
    18961 aaagactcat tcattgaatg caaaaccgaa caacgcaaaa taaacaaacg agtctcttca
    19021 tcgactttat taagcacttc atcggctaaa tattcgttaa tatgaaaatg gtttgatttg
    19081 gctaaacgtt tggcaatatc ttgcagtggt acttgtagcg tgtgtgattt attttttgca
    19141 aaaaggctaa ttagctgaag ggctgtgggc cacccttcaa cttcgttaca cagtgcgata
    19201 acatcttgct gatttaactc cgaacctaat cttgcttgaa aaaaagcggt actttcttgg
    19261 tgatcaaaca ttaactggtt aatatcaatt tccaataatt gttcttgcac tcttaaactg
    19321 gcaatactta acgggggaat tgatcgagaa atcaagataa gcgtcatatt agacggttga
    19381 tgtttaatcc aatattttaa tgcttcgtga atttcatcat tttcaataat atgataatca
    19441 tcaatagcaa gataaaaatg ctctgaaaat gccgcggctt taatcaataa ttgattaaat
    19501 aaagctaata aattagcttt acgattttcc tctaacaata cgtctatttc ttcattgatt
    19561 gctgaatgca atgccgcact aaaataagtg gcaaaacgat ctgaattatt atcgccttca
    19621 tctaacgcat accagccgat attcttttta ttttcaatcc attgggaaac cagagtggtt
    19681 ttgccataac ctgccggtgc atttatcaat acgaccggat aactgcaaga tttgtctaat
    19741 tcttgaatta aacgttttcg aggaatgctg ttttgtaatc gaaaagaaca aacaagtttt
    19801 gatggtatta acataataaa ttcaattttc tctcataaca aaatagggat gatatatcca
    19861 ccatttgtgt tctcactact tccttataat cataccatac aagatgatta ttgggatgat
    19921 ttgattttat ttggatttta cataatagcg acattcatct ttaaccgggg gtttcctatg
    19981 acatttaatt ctattgtaga aaaatactgt cgctactttg atgtgacaga tccaaaacac
    20041 tttaccttac agcagtggta tcaagttgtt gctgaaggtt cccttgagct aatttatagc
    20101 cagcctgcaa ccaaaccgac agaatcacgc cacgtgaact acctctcaat ggagttctta
    20161 atcggtcggt taaccggcaa taatttaatg aatttaggtt attacgaaca aattcgtgac
    20221 tatcttaaac aatatcaagt tgaattagta gatgttttag aacaagagcg tgatccggca
    20281 ttgggtaatg gcggattagg tcgtcttgct gcctgctttt tagattcgat ggcaactgtc
    20341 ggacaaaatg caaccggcta tgggcttcat tatcaatatg gtctgtttaa acaaagcttc
    20401 aaagagggaa tgcagaaaga agcagcggat acttgggctc gtgacagcta cccgtggcat
    20461 cgttttaatc cgtctaaaac ccgccatatc gggtttggtg gaaaaatcaa acatatccaa
    20521 gccgatcaat atgaatggca gcctaaattg accattcaag gcaaagcctt tgacttgccg
    20581 attgtaggtt ataaaaacaa catcattcaa ccattacgtt tatggcaagc agatagtgac
    20641 caatcttttg attttgatgc ctttaatgag ggtaaatttt taagtgccga taaaacgatt
    20701 gtcaatgcag ccgcactaac tcaagtgctg tatccaaacg acaaccatca agccggacaa
    20761 aaattacgct taatgcagca atacttccat tgtgcctgct cggttgccga tattttagat
    20821 cgtcacatta gcgaaggtta ttcgttagaa gatttagcaa aacgccaagt tattcaactc
    20881 aatgataccc atccaacgct cgctatacct gaattgatgc gtgtactgtt agatgaacat
    20941 caattcactt gggagcaggc ttgggatatt tgcagcaata cctttgctta cactaaccat
    21001 accttattac ctgaagcact tgaacaatgg gatcaacgcc tatttaagca gctattacct
    21061 cgccattatc aaattgtgga aaaaatcaat gatattttcc acgacaaagt acaggcagaa
    21121 tttggtgatg atgcaaaaat ttgggaaaaa ttagccgtgc tatttgatta ccgtgtgcgt
    21181 atggcaaacc tctgcgttgt cacctgcttc cgtgtaaacg gcgttgcgga aattcactcc
    21241 gatctcttag tgaccgatct attcccggaa taccacaaat tattcccaac aaaattctgc
    21301 aatgttacta acggcatcac acctcgccgc tggattcgac aagctaatcc acaattaagt
    21361 gatttattgg atcgtacctt aaaacaagat tggacacaca atctggaatt attaaaaggc
    21421 gttgaacaat atgcggatga caccggtttc cgtgaagaat atcaacgcat taaacgcaat
    21481 aacaaagtgg ttttagccaa tgaaatccat aaaacattag ggttaaatgt caatcctaat
    21541 gcgatttttg atgtgcaaat taagcgtttc cacgaatata aacgccaaca tttgaatttg
    21601 ttaaacatta ttgcgaccta tcaatcgcta aaagctaacc cgaaccaaga ctacacacca
    21661 cgtctattcc tattctcggg caaagctgca ccgggttatt atttagcaaa aaatattatt
    21721 cacgctatta ataatgtggc agatattatt aataacgaca agcaggtaaa tgatcgacta
    21781 caagtggcat tcttaccgga ttatcgagtc agtcttgcgg aaaaaattat tccagcagct
    21841 gatgtatcag aacagatttc aatggcaggt aaagaagcct ccggtaccgg taatatgaaa
    21901 ttggcactca acggcgcatt aaccttaggt acgctagacg gtgccaatgt tgaaattgct
    21961 gatatggtcg gtgaggagaa tgtctttatc ttcggtcaca ccgtagaaag cgtgagggaa
    22021 ttattagcaa aaggctacca accgaaagcc tactataacc aagatccgat tctgaaaaat
    22081 gcggttgatt tcttagccac aggaaaagcc tctaacggag ataaagaggc attcaagctg
    22141 atgttagata gcctgttgga acgagatcct ttcttagtct ttgccgactt tgatagctat
    22201 cgccaagcac aagagaaaat tggtgtagcc tatttagatc aagaaacttg gctgcgtagt
    22261 gcaattttaa atactgctcg tttgggtgca tttagctcag accgctcaat taaagattat
    22321 caacaacgta tttggttgaa tagataataa attcgggcga cttctacaat aaaggaagtc
    22381 gcctattttc tgctgtattt catatgtatt tatatatgga gagaaatgat gaaaataact
    22441 gccaaacaat attatcgggc tggaattatg ccctattttt tcgatgagcg tggtgtaaaa
    22501 aaaacagcat ctgaaaaaat aaaacattcg ttattcaaag cctttaacgg caatactcaa
    22561 gcaagagaaa cacctatccc tacggtcaac attttttacc agcaccaacc ctgtttttta
    22621 ccttttcatt tagcggataa aaaacatccg ttaaccggta cttggcagct acaactagaa
    22681 aattcaaacc aaattatttc cggcaaaatt aaagcaaggg gaattacatt acctcaagat
    22741 ttgcccttag gttatcacca attacagcta aaaacggtag ataaaacctt taattgcacc
    22801 attattatcg ctccggaacg ctgctaccaa ccacaagccg tcattgaaca aaaaagattg
    22861 tggggaacct tcctacaact atacacctta aaatcagccc acaactgggg gattggcgat
    22921 tttggcgatt taaaagactt cattcaacag attgcccctt accaagcaga ttttatcggc
    22981 ttgaacccga ttcactcact ttttccggca aacccgaatt ctgccagccc atacagtcca
    23041 tcctctcgcc gatggctgaa tattgcttac attgatatca atcagctagc ggaatttcaa
    23101 caaagtgatg aagcacaaac ttggtttcat tctgctgaaa tccaacaaca attatcagaa
    23161 ttacgcactc aggattggtt gaattacgag caaatcattc cgttgaaatt gaaagggcta
    23221 cgctttgctt tcgcaaaatt tcagcaaaat atgaccgctt gcgctgcccc tgcttttatc
    23281 gaatttgtac aaaaaggtgg tgaaagctta caagttcaag ccacatttga tgcccttcat
    23341 cagcatctat cggcacaatt tgccgaccaa tggggctggg atttctggga gaaagcctac
    23401 caagactacc actccgcagc cgtgcagcaa tttagagaaa cgcataaaac cgacatagaa
    23461 ttttaccttt ggttacaatt cgttgccgat caacagctag cagaatgtga tgctatctgc
    23521 cgtcagcaaa atatgcgtat tggtatgtat cgcgatctcg ccgttggcgt cagcccgaat
    23581 ggtgcagaaa cgtggaatga caaacaactt tattgcttaa atgcctctgt cggcgctccg
    23641 cctgatgtat taggtccgca aggacaaaac tggggcttaa ccccaatgaa tccgcatgta
    23701 ttaaagcaac aagcctaccg tccgtttatt gagttagtca gagctaatat gagtcattgc
    23761 ggtgcattac gccttgacca tattatgtct ttactccgtt tatggtggat ccccaaaggc
    23821 gatagtgcgg ttaatggtgc ttatattcgt tatccagttg atgatttaat cgcaattttg
    23881 gcacttgaaa gccaacgcca ccaatgccta attatcggtg aagatttagg tactgtgcca
    23941 aaagaaattg tgagcaagct caaaaatgcg gggattttat cttacaaaat tttctatttt
    24001 gaatttgatg aacaagggaa gagtcgagac ttacagcatt acccttacca agcaatgacc
    24061 acattaagca cccacgattt accgactatc aatggttatt ggcgtggcta tgattttgaa
    24121 ttaggcgaaa aattcggcgt ctatcctaat tcgaatattt tggcaatcct taagcaagat
    24181 cgagtcaatg ccaaagccaa aatcttacaa cgcttacaag aacataacgt agagatcgca
    24241 cctgaaatta gcgagcaact taattctccg gtgaataccg catttattca ctgtttacaa
    24301 acctatgttg caaatgtaag cagcggatta ttcggcttcc aacccgaaga ctggttgggt
    24361 atgactgagc cggttaacat tccgggaacc agtacacaat atgcaaactg gcgacgtcgg
    24421 cttagtgtta acctcgagga gatcttcaca gataaagata ttcaagcctt attaaaagaa
    24481 gttaatttaa tccgtaaaaa tcaataaaag ttagataaga aaaaaggcga ctttccgtcg
    24541 ccttttgggc ttatatgctt gatgtctatc tttatccacc tgaaacccac aacataatcg
    24601 ctagcacttg aggtagcata atacgcaaaa acattactag tgggtaaaca gttgcatagg
    24661 ataacgctgc agcgccattt ccctctttaa tttcattggc aaaagcaagc gctggaggat
    24721 cagtcattga gccggcaagt aatccacaaa tcgttaaata gtttactttg ttatacattc
    24781 tggcaatcaa tcctgctatc atcaatggaa caaaagtaat aatcgcccca tagcatatcc
    24841 actcaacgcc ctcactgctt aatagcgttt cgagaaatct accgccagat tttaaaccaa
    24901 ctaccgctaa aaacagtaca ataccgattt cacgcaatgc aagattggca cttggtggca
    24961 taaaccagta gagtttactg aaactaccaa ttcttgcaag aataagagca accaccagtg
    25021 gtccaccagc caagcccagc tttaacgcaa cagggaaacc cggtaaataa atcggtacag
    25081 aaccaagtaa tactcccaaa ccgatcccga taaatattgg caacatttgg acttgttgca
    25141 actttgagtg cgcattgccg ataatcgtca ttaccatttc aatatcagct tgccgcccta
    25201 ctaaattgag aacatcacca aattgtaacg tcatatcacc tgttggtact aattctacac
    25261 cggctcgatt taaacgagaa atgacaacat cgtatttgcc tttaagcatt agctgacgaa
    25321 tttgtttccc gaagactttt tcattcgtca ctacagcacg ttcagaacgg taaatcgtgc
    25381 ctttggttga gacagataca tctactgcct cacctaaaat aatctgcatt tttcgtaatg
    25441 aggattcttc acctactaag tgtaaaatat ctcctatctg tagaatcgta tctacacgtg
    25501 gaatagaaag ctcattcccc cgttttaagc gtgaataagc tacttcgtgc aaattaaaat
    25561 caggaatttg tttcaacgtt aaaccgtgaa tatttggatt agtcagacgg acatttaagg
    25621 tactaagttg atctttactt ctattttgct gtttgttaaa agcctctgct tccgcctcaa
    25681 tattgattcg aaataaaatc cgaatcagcc acattgaaag tagaattccg ataatgccga
    25741 acgggtaagc aatcgcataa ctcattccca taatttcagt tacactctca gcgcttaact
    25801 cagccaatac ctgttgacct gctcctaaag aaggggtatt ggttacagcc ccggagaaaa
    25861 tgcctaaaat cacaggcaaa ggaacattga agaatttatg aataagaata actaaaatac
    25921 cgctaatcag tacaatcagt accgcaaaac cattgagttt taagccagaa tgttttagtg
    25981 aggcaaagaa tccaggtcct acttgaattc caattgaata aacaaataaa atcagcccga
    26041 actcttgaat aaaatgaagc gtatgggcat cgagcttcac atcgaattgc gccataaaat
    26101 gggagacaaa cagcccacca aataacactc cccctatacc tagccccacg cctctgattt
    26161 taatatggcc aatccataag cctagaacgg ccactaaaga taataaactg acagtaagtg
    26221 caatttcgct cattacagcc tctctttaat atgaaatacc tcaaaaatgg tatccaattc
    26281 taccaaatct caaaaacgaa aaatgagatc tatgtcaaaa aaataaaata ttgatagtat
    26341 tactccaaga tgaacttcaa aaaagttcct gaatttaaaa aaaattctcg acaatacttt
    26401 tttttacagt aaattaaaca attatttaaa taacctaagg atcaaacaca atgttatcaa
    26461 acgaagtctt tatttcgatt atcgtgctgt taatcctaag cttgcttaga attaatgtag
    26521 taatcgcact tattatttct gcccttactt gcggtctaat cggtaatctt ggtgtagaag
    26581 gggctggatt taccgaagca ttggaaaaaa caataaaaag ttttactggt ggtttaggtg
    26641 ggggtgcgga aactgctatg aactatgccg ttcttggtgc gtttgccgta gctctatcaa
    26701 aatcaggcgt gaccgattta ttagcctata aagtgatcaa atcctttggt cacagcccgt
    26761 caggtcgctc cgttacttgg tttaaataca ttgtattatt tgtgttagtg gcatttgcaa
    26821 tgtcatctca aaacctaatt ccaattcata ttgcctttat tccgatttta attccaccgc
    26881 tattaagcgt aatgaataaa ttgcaaattg accgccgtgc ggtagcttgt gctttaacct
    26941 ttggtttaac cgccacttat atgttaattc cggcaggttt cggtcagatc tttattgaaa
    27001 gcatcttagt taaaaatatc aaccaagcag gtgaaccgtt ccaattagtg actaccacag
    27061 cggaaatgac caaagcgatg ttaattcctg tttccggtat gattttaggc ttactgtttg
    27121 cattctttgt gtcataccgt aaaccgcgtg tgtatattga aaatatgcct gaaccaaccg
    27181 cagatgatat tgaagcccgt gttgcaaacg ttaagccctt ccatatcggc attagtattg
    27241 tggcgattat cgcgacctgt tcggtgcaat tagcaacaaa ttcgactatt atcggcggct
    27301 tagtcggtct ggttattttc gccttaggcg gtgtatttag actgaaagag agtaacgatg
    27361 tcttccaagc tggcttacgt ttaatggcga tgattggctt tgtgatgatt gccgcctccg
    27421 gttttgccgg cgtggtcaat tcaacaggcg gtgtgccggc attggtagaa agcctgcgtg
    27481 atgtgatttc atcaaaagaa atggcagcat tgctaatgtt agtcgttggc ttatttatta
    27541 cgatgggtat cggctcttca ttctcgactg tgccgatcat tacctcaatt tatgtgccgc
    27601 tttgtatctc atttggcttc tcgccactgg cgacaatggc gattgtcggt gttgctgctg
    27661 cactcggtga tgcaggttct ccggcatcag attccacact tggtccaacc tccggcttga
    27721 atgctgacgg taaacacgac cacatttggg attctgttgt accaactttt atccacttta
    27781 acattccatt attagtgttc ggctggattg cagcaatgac actttaagct ataatatgca
    27841 aaatttttgc taaaaatgac cgcttgtagc cattacaagc ggtctatttt cttctttatt
    27901 ttgcaaacca cattaggatc accaatgaaa tttatctctt ttaatatcaa cggattacga
    27961 gccagaccac atcagctcga agcgattatc gaaaaacacc agcccgatgt actcggctta
    28021 caagaaatca aagttgccga tgaagatttt ccttacgatt tagtcaatca cttaggctac
    28081 cacgttttcc accacgggca gaaaggtcat tacggcgtgg cattactgac taaaaaagag
    28141 cctatagcgg tgcgtaaagg cttcccgaca gatgtacttg atgctcaaaa acgaatgatt
    28201 atggcggata tcgagaccga tttcggcgtg ctaaccgtat taaacggcta tttcccacag
    28261 ggggaaaatc gcagccacga aaccaaattc ccggcaaaac aaaaattcta tgctgatttg
    28321 cagaactact tggaaagcga attaaagccg gaaaatccga ttattattat gggcgatatg
    28381 aacatcagcc cgactgattt ggatatcggc atcggcgagc caaaccgcaa acgctggctg
    28441 cgtgacggta aatgttcatt cttacccgaa gagcgtgaat ggctagatcg cttatacagc
    28501 tacggcttgg ttgatacttt ccgtgcaggc aacccagacg tgaacgataa gttctcttgg
    28561 tttgactacc gttcaaaagg ttttgatgat aatcgtggct tgcgtattga tttaattctt
    28621 gcttcaaaat cacttgctga gcgttgcgtg gaaacaggca ttgatttaga cattcgagca
    28681 atggaaaaac cgtctgacca ctcccctgtt tgggcaacct ttaaataaag ttgcaaaaaa
    28741 atctgagttt tcaaccgctt gtcagttttt agccctacaa gcggttattt tttctcactt
    28801 ttttgcactt tttacgctgt actatatccc tattcaaatc tgtgctacaa tcaaacacta
    28861 tttttagatt atttttggat tatgaacaaa cgtttaaccg ttattttact gattattgtt
    28921 gccgtacttg gtggctggta ttacagctta caagagaaag agaatacggg gcttgatcag
    28981 cttattaaaa aggaaggaca gcctgaatat gtggggaata aaatgtccac cacggtctat
    29041 gatctaaaag gaaacccaca atatttcgct caagctactg aaattaaacg ctatgagtct
    29101 actgagcgta ctgagttttt taaacctttt attgagcttt ttgccaaaga gtcgacgcaa
    29161 aaacagtgga aagtcagtgc cgattatgca gaaattacca aagaaaaaat gttaaattta
    29221 aaaggtaata tcaaacttgt tgcattagat cctgcatcac gtttgcaaca aatcactacc
    29281 gatacgttaa ctgttgattt aaatacacag gatattttta ccgaaagtac ggtcaaatcg
    29341 ataggttccg gttttactac aacgggggtt ggattaaaag gtaacttaaa acaacaagtt
    29401 gcgactttgc aaaaagatgt aaaatcttac attgaaccga ccattattca agaaactaaa
    29461 gaataatttg cttggaacaa ggaataacaa tgaaattaat gtttaaatct attttagtga
    29521 gcgtgttact gggtagcagc ttttccgctt atgctctaaa aggcgatacc gatcagccga
    29581 ttaatattga ttcaggtagc caatcgttag atatgactaa caatatcgtg acctttagcg
    29641 ataatgtcgt tatcactcaa gggtcgatta aagtgaccgc agcaaacgtc aaaattaccc
    29701 gtcaagaagg taaaaaagaa actattgacg ctacaggctc acctgtaaca ttccaacaaa
    29761 ccttagataa cggtaaaccg gtaaacggta aaggcaacag cgttcattat gatttaaact
    29821 ctgaattttt aacgctgatt ggcaatgcgg aactcaaaca acaaggtagc tttattaaag
    29881 ccaataaaat tacctatgat gtgaaaaaac aacaacttaa agctaccagt ggcggtaaaa
    29941 cccgagtgaa aaccgtgcta attccaaatg aacttcaaga taacaagaaa aaataaggtt
    30001 aaatgatatg tctgtgcttt atgccgaaca tttagcaaaa agctataaac aacgccaagt
    30061 ggtaaaagac gtcagcctga atgtcaaatc aggtgaaatc gtgggcttgc tcggtccgaa
    30121 cggcgcaggt aaaaccacca ctttctatat ggttgtgggt ttggttcgcc acgaccacgg
    30181 cacaattcgt attgacgacc aagatatcag cacactacca atgcacgaca gagcaaaaca
    30241 agggattggc tatctaccgc aagaagcatc tattttccgc cgtttaagtg tgtacgataa
    30301 cttaatgtcg gtattacaag tgcgtaaaaa tatcaatgat aaacagcgta aagagcgtgc
    30361 cgaagagctg attacagaat tccatattga gcatattcgc aatagtttag gtcaatcact
    30421 ttcaggtggt gaacgccgcc gtgtggaaat tgcccgagca ttagcagcga acccgaaatt
    30481 tattctgtta gatgaacctt ttgctggggt tgacccaatc tcggtaattg atattaaaaa
    30541 aattatcgtc aatttaaaag agcgtggttt aggggtattg attaccgacc ataacgtacg
    30601 tgaaactcta gatgtatgtg aaagagccta cattgtcggt agcggcgaaa tgattgccag
    30661 cggcacacca cagcaagtgc ttgaaaaccc tgatgtaaaa cgtgtttatt taggcgatca
    30721 attcaaactc taaaaaatcc cctctttggg gatttcatct ttagatgaaa aattatgaca
    30781 aaactaaccg aatttctaag ccctgaaaat gttcgccaag gtgtactgat ttcaagtaaa
    30841 aaacgagcgt tagaactcgt gggtaaaatc gtggctgaat caatcaacca aaccgaacag
    30901 caatctgaag cactctgccc tattgaatgc tttggcaatt tatttaaacg tgaaaagtta
    30961 ggcacaaccg gcttaaatca aggcattgca cttcctcatg caaaattgcc cgcttgcggt
    31021 gatattgagc tgactaaacc gattgcggtc tttttacaac tggaagaagc gattgactac
    31081 gaagcccaag acaacaaaga agtggattta atttatgcaa tgatgtttcc ggaaaatagc
    31141 tgcgaacagt ataaaagttg cctacctgca attgcacaga aacttaccga taaatcgtta
    31201 ttaaaacagc tccgagcagc tgaatccgca gaagatattt ggcaaatttt ggtgtatgct
    31261 gataatcacc taaaagatga agaataatac tgaggaaata tggaattaat cattataagc
    31321 ggacgctcag gctctggtaa atcggtagca ttaagagcat tagaagatgc aggttattac
    31381 tgcgtggata atatcccttt acctttaatt ccaaccttaa cctactacct tactcaagaa
    31441 aatcgttcgg cagtcatcag cttagatatt cgtaatttac cgaatacgcc taatgcgatt
    31501 gaagaattgc ttacccagct tgagccttta aatgctaagc tgattttttt agattgcgaa
    31561 cgcaatacct taatccgccg ttatagcgat tcccgccgaa tccacccgct ttccacccaa
    31621 gacgatctct cgttagaagg tgcattggat ttggaacaaa aattgcttga gcctttggtg
    31681 caaaatgcaa attatattat tgacaccagt catctttctt cgcacgaatt agcggaaaat
    31741 cttcgccaaa tactgcaagg ctcaaccgaa aaagagctta aaattatttt ccaatcattc
    31801 ggttttaaat acggcttacc tgccgattcc gattacgttt ttgatgttcg ctttttaccg
    31861 aacccacatt ggaatccgga gcttcgccca atgacaggct tagagcaacc ggtgattgat
    31921 ttcttagaac gccaaaccga agtgcataat tttatttacc aaacccgcaa ttatttagaa
    31981 atgtggctgc cgatgttgga acaaaataac cgtagctacc taactattgc gattggttgc
    32041 actggtggaa aacatcgttc catatttatt gccgagcaac tggcaaaata tttccaagca
    32101 aaaggcaaaa atgtgcaagt tcggcataaa agtttggaaa aacaccataa aaaaacatct
    32161 taaataagta ggggctggtc ctgtgccagc cctcatttca actattttag ggcgggcaca
    32221 gggcaccgcc cctacatttg attttatgaa atccgcagat attgttattg ttggcggcgg
    32281 tatggttggg ctggctcttg ccggactgct caaagatgtc gattgccaaa ttaaaattat
    32341 tgagaaaaac acgcccaaat ttgatgccga tacgatttac caccgtgtaa gtgcgattaa
    32401 tgcttcaagc caaaaaatac tggaacagat tggtgctttt caacacattc cggctcaacg
    32461 cctttctcct tacaccgaaa tgaaagtgtg ggaaaaagac agctttgcta atatccattt
    32521 tgataataat gataatgaaa tcaagcaatt aggactttca caacttggct ttattttgga
    32581 aaatgcggtg attcaacacg cattgtggca acaggtttct caacaagcta atgtagaata
    32641 tattatcgcc gccccccaaa ctctgggcgt gagcgaaaac ggggcatttt taaccttaga
    32701 taacggcgaa atgctgtctg ctaaattggt tgtcggggca gacggtgcaa attcgtgggt
    32761 gcgtaaccag atgaaaatgc cgcttaccag taaagattat caacataccg ccttagtctg
    32821 taatgtcaaa acaaccgaaa agcacggcaa aaccgctcgt caaatctttg ctgaagatag
    32881 catttttgct tttctgccaa tggcagatga gcatctctgc tcgattgttt ggtcgctgcc
    32941 accaaacaaa gccaatgaat taaaaaatgc aagcgaagcc gaatttaata aagccttaac
    33001 gattgccttc gataatcagc ttggcttatg tgaagtgcaa agtttgcgtg aaatttaccc
    33061 gcttgcagca cgcttctgcc gtgactttgc ccaacctcgt attgcgttga ttggtgatgc
    33121 cgctcatacc attcacccat tggcgggact tggtgtcaat ttaggctttg ccgatgccag
    33181 aacgctggca aacgaaatcc aaaaacagtt ggtaaacaac caagatattg gtgaataccg
    33241 ccatttacgc caatttgaac gtgagcgtaa agcccaagcg atgaaattat tagccacaat
    33301 ggaaggatta aaacagctat ttgacggcaa tcacccgctt aaaaaattat tcagaggaat
    33361 tggtttaagc ctaaccaacc agctgccttt tgtgaaaaag cagcttattc agcaagctat
    33421 ttacttataa aatgtaaatt ttttcgaaat aacgtaaaga tgaacgattt tatgaactaa
    33481 tacggagatt acttgtctat ttattggtac aataaccagc ctttattggc ttttattttt
    33541 atattcttga ggaatttttt aatgaacaaa ttaacaaaaa tcagtgcaac cgctttagtc
    33601 gcattattct tagcagcttg tgataaacca gcagaaaaag caccggcaac agaacctaca
    33661 aaaacaactg aagctgcacc aactacaaca gctcctgctg cagaagcagc caaacctgct
    33721 gaaacagctg tagccgctcc aagcgaagct gcaaaagcag attaccaaaa attagttgat
    33781 tggaatacgg cacaagaaag cacaatggca acagcacaag cagaactaca aaagaaatta
    33841 gctacacaag atcctaaaca aattcaagaa ggattaagtg catttaataa aaaagtagaa
    33901 gaaactgtaa aaagcttaga tgcgattgaa gtatctgatg cacaaatcaa aacatttaaa
    33961 gaaaaaacaa aatcagtttt aacactttca agtgaagtga tttctgaaca agtaaaaacg
    34021 atctctacac caaatgacca agcagcatta caagccgtac aacaaaaagc tcagtcttta
    34081 attgaagctg gtaatgagtt acaaaaatta aacgtagaat tacagcaaag attctcagct
    34141 aaataattta ccattcaatg aaaagctaga gtattttgct ctagcttttt tttgcaatta
    34201 ctaaggatta ctatgaacac gctcgctaaa attagcctat ctgtattatt tacccttttt
    34261 ttaaccgctt gcgaacaacc taattctacc aaaacacaga gctcagcaga atcgccagtt
    34321 caagtgaaag aagagtcaaa agaagaagtt aaacctgctg ataccggcgc tcaagattat
    34381 aaaatgttac gggaatggca agacactcaa gaaaaagcct taaatgatgc aattaaagcg
    34441 gcaacagaaa cacttactga caaacaaaaa gccgattcta ccttaatgca agagacagtt
    34501 aataacgcat tattagctca aattgatcat attaagataa gtgctgaaac cctgaatatt
    34561 caaaataatg aagtcaaagc actaaaagac aaaaccttag aagtcctgac tttaggggct
    34621 cagatgatcg tagaaggtgc taaaatggag aaaaatccta caccggaagc acataaagca
    34681 tttggcgagt tacaaacaaa attgaatcaa ttagctgaag aagggcaaca gttagaaaat
    34741 atattaagag ctaaatatg
//
LOCUS       DANMCL010000015        34759 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.015, whole genome shotgun sequence.
ACCESSION   DANMCL010000015 DANMCL010000000
VERSION     DANMCL010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 34759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34759
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.015"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXF40_000663"
     CDS             complement(199..1074)
                     /gene="ubiA"
                     /locus_tag="PXF40_000663"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HDL5802035.1"
                     /translation="MNNETLFSKQKWIAYAQLMRFDKPIGTLLLLHPTLWALFIAAEG
                     MPPVAILAIFTLGVIVMRAAGCVINDYADREIDGHVKRTSQRPLATGRVTTTEAKVIF
                     AILLLFAFLLDLMLNRYAFLLSFVAVFLAVIYPFMKRFTHLPQVVLGMAFGWSIPMAF
                     GAVTETLPLECWLLFFANLAWTVAYDTQYAMVDRDDDLRIGVKSTAILFAQYDNKIIA
                     LLQFITLILLGLLGVVKDYHIGYFVVLALSATLFIYQCWLTKKRERSECFKAFLNNHY
                     FGLGVFVAILVGIYF"
     gene            complement(1067..1828)
                     /locus_tag="PXF40_000664"
     CDS             complement(1067..1828)
                     /locus_tag="PXF40_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HDL5802036.1"
                     /translation="MKQANRHKKIIELVNQLGYVSTEQLVAELNVSPQTIRRDLNEMA
                     ENNLIRRHHGGAAAPSNTENSDYTHRKQFFSHEKNAIAQQVAKLIPNGASLFLDIGTT
                     SEAVALALLSHKNLKVVTNNLNAAHILMQNEDCQITVAGRGLRSDGGLIGEETVRFIN
                     QFRLDFGILGISAVDMDGSMLDYDYHEVQVKRALMECSRQVVLVTDHSKFTRTAIARL
                     GNVKEVNYLFTDQDLPLELQTHLSQSDVIVKICNE"
     gene            complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXF40_000665"
     CDS             complement(1895..3262)
                     /gene="purB"
                     /locus_tag="PXF40_000665"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HDL5802037.1"
                     /translation="MELTALTALSPIDGRYQDKVASLRPIFSEFGLLKFRVTVEVRWL
                     QKLASHTQINEVPVFSEKANDYLNQIVADFSLEDANRIKTIERTTNHDVKAVEYFLKE
                     KCEALPELQAVNEFIHFACTSEDINNTSHALMLKTAREEVLLPEWKKVIDAVAELAKC
                     YQHIPLLSRTHGQPASPTTMGKEMANVAYRLQRQYKQLENLEILAKINGAVGNYNAHL
                     SAYPEIDWHTFSQEFVESLGVTWNPYTTQIEPHDYIAEFFDCVARFNTILIDFDRDMW
                     GYIALNHFKQRTIAGEIGSSTMPHKVNPIDFENSEGNLGLANAVMAHLGQKLPISRWQ
                     RDLTDSTVLRNLGVGLGYALIAYASTLKGISKLEVNEQHLRDELNQNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDETAMREFIDKLEIPENEKNRLKEMTPASYIGYAVE
                     LVDKL"
     gene            complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXF40_000666"
     CDS             complement(3296..3925)
                     /gene="hflD"
                     /locus_tag="PXF40_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HDL5802038.1"
                     /translation="MADYHDITLAYAGVCQAATLVQQFAHKGMADREAFKCALESLLI
                     TQPESTLSVFGDDLSHLKMGLETALAQTGGGNGKLDTEVGRYWISLLALSQKLNKNPE
                     AKQQLAQRLQQVERQLALYEDNVMADQMIANLAAIYSDIISPLGTKIHVMGMQDYLVR
                     PDIQNKIRASLLAGIRAGILWQQVGGSRWQFLFSRKKIFNQAQKFYRQI"
     gene            complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXF40_000667"
     CDS             complement(4057..5721)
                     /gene="cydC"
                     /locus_tag="PXF40_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HDL5802039.1"
                     /translation="MKSLFPFFALYQTHFGRLLLGVVLAILGLAASIGLLSLSGWFLA
                     ASFLAGNALIFNFFYPSSGVRGLAVGRTISRYFERLVTHDATFRVLANLRASVFKKLI
                     PLSPSGLNRFRNSELLNRLVADVDTLDTLYLNLVSPFVSAVMIIAFMAIGLSFVSVPL
                     MLIICGTLLVLLAVIPTVFYRLGLKLGRNAIQSRANYRSQFIEWVQLNAEFLLFGNLN
                     QMSEKLQQTEQQWLNAQSKESRLSGLSNSLIMLSNGILTCVVIYLVSTSINVPTAKYP
                     EALIALVIFCVMASAEILSPIGIAFLHLGQVITAAERISEITEQQPNVTFGSKAEWQN
                     LSQNQPLVRCENVSFAYYGEQNVLNNLSFKVLKGQKVAILGKTGSGKSTIFQLLNRNY
                     DPTSGQIWLNNCKIDEYSEPMLRSKLVTLSQRVHIFSQTLKDNLLMGNAQATDEQMQE
                     AVRKVGLGHLLETDGLNLWLGEGGRPLSGGEQRRLGLARLLLSSAELVLLDEPTEGLD
                     RETEQQILNLILTHCCDRTLIMITHRQSGLDKFDVVYRIDNGRLVG"
     gene            complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXF40_000668"
     CDS             complement(5721..7487)
                     /gene="cydD"
                     /locus_tag="PXF40_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HDL5802040.1"
                     /translation="MEKQRQRELQKWLKSQQKVIKKYMHLNILLGSFSSLCMIGQMWL
                     IATMLDKMLIGKQSPNSFLVEIMLLFCCFAARAFFIFLRERVGFKAGQTLRLHLRRQI
                     LAKMEAVGPMSIQQKPAGSWATLMLEQVENLHNFYARYLPQQFLSLIVPLLILCFVFP
                     INWAAGAILFATMPLLPLFMILAGMKAVEANQRNIGILSRISGQFLDKLKGLETIRLF
                     GQAEKQTEQIYQSTEDFRISTMDVLKMAFLSSAVLEFFTAVSIAVTAVYFGFIFLGEL
                     DFGYYGTGVTLFIGFFCLMVAPEFYQPMRELGVFYHDKAAAISAADNIETFLKEKVKT
                     QGGNLQENVENQPLVIQAKDCVIFSPQGKALTQALNFELNAHQHIALVGQSGAGKSSL
                     MNMLLGFLPYEGSVTINGTELRDLNLSQWRAKLAWVGQNPQLMHGSLKENILIGNPNA
                     TDSELAKALQLSKADEFVARLGLEHQVQDSNIGISGGQAQRIAIARALLRPYELLLLD
                     EPTASLDMDSEQQVLAALHNLSREQTTLMITHRVEDLTQCDEIWVMKQGQIIQKGRFT
                     ELEHTGFFAELIHNELVHQGEI"
     gene            complement(7602..11699)
                     /locus_tag="PXF40_000669"
     CDS             complement(7602..11699)
                     /locus_tag="PXF40_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HDL5802041.1"
                     /translation="MTDENKQTATNQTDSAQEPQATQPKKSKWRFLKHGFCLTFILLL
                     LAILFLCTGYGQRKVLSWVDKFVEPLQLGQVQGSLQDGLQLSDARFVMDGVNVTVGQA
                     DLHIGFSCLLHYEMCLNNLSLKDTEVLIDTTKLPPSQPKEETEPFTELNLPLGISAQN
                     INLENIKVKVDDMDIHLNHFHTALSGKGRAITVHPTQLEGLNLLLALKLDETDTEQAV
                     DFAQKNAKTEALSATNPQEIADKVIQEAVEKTSEKVVEGFHQLQRKTVAQAEQVDNKV
                     DWAAIKAQLAQPLLDKNIRFSLPLDLNIEQIDIANVAIAQKAKDEKGNLIEPISLLNV
                     ASLQLQAQAKDQHINLKSLDFKSDQGDLTASGSLSLQDNYPLSWTLSGHEAKTAKVKL
                     PFNQIEASLSGELYDKTSLKVKTAGAISASLEGNVALAQAKTPFDLSLKSESMRYPFA
                     PQQNGDVLSLENIAMRLNGNLLDYALEAKVSAKGMGVPASSASLTGKGELTHFNIQDL
                     SLNTLEGTAKIDGLVDWSEGVAWRSNLKLQHINTKSLLADWPAVLSGSLSSEGYAGRG
                     NSASGWKADVSNIDIKGSLLQKNLHLSGNLKADHQQLLDVPGLSLVYGENKIDLKGVL
                     GEKSDFYADIKAPNLQGLVPNLKASVNGNAKLSGKVSEPNIDLDLVASNVGYEQFKLQ
                     NLTAKGKITTEKTIQGDLTLGLRQFAYNEIKVGNATLLLKGNEENHSLKLSAKGNPVG
                     ADLQISGKFDRLKEIWEGQLSQVSIQSTEFGQFQADKAVNVKYDNKAINANISAHCWH
                     NRKINLCFPTAFNAGVEGKVPFEIRNFDLAVLQQFLEKNSQLSGIVNAKGDAAWFKNK
                     QPQVNLDLTSNAIKFIQKMEGGKSFPLTVSPLKIDLKMSDNNLTLKSDLRVENNGRLS
                     TDLVMKDLSKARALSGNIHLDQLSLKLIRPLLERGDSVDGNVNARLTVSGTATSPLLH
                     GNLNVTELKARSVTMPFDITGGNLAMNFHGATSTLSGKLQTKQSELRLEGDADWRDLN
                     AWKTRVHAQANRFQVDIPNIAKVAVSPDIQVTATPTLLTLSGNVDIPWARIEVEQLPE
                     SAVSVSGDEVIMDGSVKNKVPFSQRNIPAQTSGGMAINADIKINIGNDVKLKAYGLNS
                     NVNGLLSVRQGKQGLGLYGQVHLREGRFAAYGQDLLIRKGDISFAGSPSQPTLDIEAI
                     RNPEAMEDPTITAGVRVTGLADNPTVKVFSDPAMSQNEALSYILTGRSLESSGDTSSS
                     NAVAAALLSMSLSKSSKLVGDVGSTFGLKDLSVTTAGIGDNTKVEVSASLAPKFRVKY
                     GVGIFAPLTELTLRYNLTPRLYLQWVSSINQAVDLMYRFEFDELF"
     gene            complement(11780..13615)
                     /locus_tag="PXF40_000670"
     CDS             complement(11780..13615)
                     /locus_tag="PXF40_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HDL5802042.1"
                     /translation="MNTKLHFLTFCCLVAFASMAQANQEQRLSDVDRERVENLQEKLA
                     EDSDDEPEIEPLVTLEVKGIQGKDAKKNVELYLDQIANEYADGSERYQYLVQTTVDKA
                     LRALGYYNSRYQFVQLPQEGKKPLLVLNVELDKETVKIDETDIVLQGDAKTDEDFAHL
                     VSKAPKQGSRLNHKTYDNFKGDIESTAFSKGYFDGHWLYHRLEVYPTDHKADWRLGYD
                     SGKRYHYGQIRFVDSQIKEEYLQNILKIHSGEPYLANDLSILTQDYLSSNWFSSVMVE
                     SHLNEQDKLVDLNVLFQPKKRNEVEIGIGYETEVGPRLQLNWKKPWLNSRGHSIESRT
                     YVSKPEQTFEFGYNIPLREDPLHYYYQLSGTLENEDQNDTKSTAATLGLQRFWTHETG
                     WSFSVGLKARYDSFTQANDRFKTLLVYPTASLNRTRTDGKPYPLWGDTQKLTVNWGSR
                     AVGSDVNFYSYKASTSWARTYFDNHRFYLRAELGYLKANQFERIPPALRYFAGGDMSV
                     RGFGYKDISPRDPSNGKRVGGSHLATGTVEYQYQVYPNWWGAIFYDAGLASNKFKTQD
                     LYYGTGLGVRWASPIGAIKFDVATPVKSPDNSKGIQIYIGLGSDL"
     gene            complement(13627..14472)
                     /locus_tag="PXF40_000671"
     CDS             complement(13627..14472)
                     /locus_tag="PXF40_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HDL5802043.1"
                     /translation="MFKQINKRLNFNIFLQMFVLFTPLVQAAQMAIVIDDVGYRIKED
                     REILALPKAVSVAIIPVAPYATERAKDAYNQKRDILIHLPMEPKSKQPIEEGGIHIGD
                     NEEKIRKLIHTSRGQVPYAIGLNNHMGSGATSDSATMQHLLKVLKENTLFFLDSKTIG
                     SSVAAKTARQFGINTLERDIFLDDSDLLADVQKQFAHAINHARKNGVAVVIGHPRKNT
                     ISVLKQNLAQLPQDIELVSVGNLWRNEKTVPDKPFIMLFEQEPALSSVPPYDSIPLLR
                     GIPKE"
     gene            complement(14473..15636)
                     /locus_tag="PXF40_000672"
     CDS             complement(14473..15636)
                     /locus_tag="PXF40_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HDL5802044.1"
                     /translation="MLVKRINSYCWTAIFSGVISFSTPFSFANNLNQIQQKIQQQTSK
                     INEQKQKRNALQSTLKNQEVEMGKVLDKLQKTEMSLTEVRQTIKATETEIARLEKLEK
                     QQKEKLKEQLDSAYRSGVNPSVLERLMSEEAKNAERMTAYYQHMNNIRIDAIVEIRKT
                     QADLKARRDELKGQQKDHQTQLNEQKKQEKDLKKVQSQRESTLRLIDKTLEQDQSRLE
                     NLRSNEQALKQQLEQAQREAQQAEKREQQREKQAKSGQSKTTENVERTPIKAGRYTMP
                     VSGNIITPFGNNWHGVVIGASAGTSVRAMASGRVIMAQWLAGYGNMVAIDHGNGDISL
                     YGYNQSISVSKGSRVQGGQVIAKVGNSGGQSRSALYFGVTRKGTPINPLNLVK"
     gene            15804..16487
                     /locus_tag="PXF40_000673"
     CDS             15804..16487
                     /locus_tag="PXF40_000673"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HDL5802045.1"
                     /translation="MQLVFIRHGFSEWNAKNLFTGWRDVNLTERGIEEAKSAGQKLKA
                     AGFEFDIAFTSVLTRAIKTCNIVLEESDQLWIPQVKNWRLNERHYGALQGLDKKETAE
                     KYGDEQVHIWRRSYDISPPDLDPQDPNSAHNDRRYANLPKDLIPNAENLKITLERVLP
                     FWEDHIAPALISGKRVLVTAHGNSLRALAKHIEGISDADIMDLEIPTGQPLVYELDDN
                     LKVISKRYL"
     gene            complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXF40_000674"
     CDS             complement(16624..17181)
                     /gene="frr"
                     /locus_tag="PXF40_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HDL5802046.1"
                     /translation="MINEIKKDTQDRMEKSLEALKGHIAKIRTGRAQPSLLDGIQVEY
                     YGSATPLRQVANVVAEDARTLAVNVFDKSLISAVEKAILTSDLGLNPSSAGTTIRVPL
                     PPLTEERRRDLIKIVKAEGEQGKVAIRNVRRDANDQIKALLKDKEISENEQHKAEEDI
                     QKITDTFIKKVDEVLAAKEKELLDF"
     gene            complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXF40_000675"
     CDS             complement(17233..17949)
                     /gene="pyrH"
                     /locus_tag="PXF40_000675"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HDL5802047.1"
                     /translation="MSKPIYKRILLKLSGEALQGSEGFGIDPSILDRMALEIKELLAE
                     GVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAEVNAKLM
                     SAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGSPFFTTDSAACLRGIEIEADVVLK
                     ATKVDGVYDKDPAKYADAKLYNKLTYAQVIEQELQVMDLAAFTLARDHGMPIRVFNMG
                     KPGALRNVVFGTEEGTTISE"
     gene            18041..19603
                     /locus_tag="PXF40_000676"
     CDS             18041..19603
                     /locus_tag="PXF40_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5802048.1"
                     /translation="MKSKQLFGILVAISLATAASCLMLIGSGFFPNPSIFEVILGVFL
                     IIALASSKWTYYLLLLPISIAYAIYTPVGIKFGKPTYEYIASIFATDMMESKEFIAQL
                     PILNIAAGIAIVLAVIFYRKITNRYQIRFLRNKTFVISAFVLMLFSLAPFKFFQEFYN
                     SSLKVKKELEVLNNLTLDSQWGQSTLSSTSNYDDYVLIMGESARKDYHHAYGYPAANT
                     PFMSSAKGTLIDGLTSGGTNTIASLRLMLTKPDTEKWEANYGLTLIDLIKSTGIKTYW
                     ISNQGYLGNYDTPISSIGNKSDVKIFTKAGDSLNTNVSDFELLPHFAKVIEEPAQGKR
                     FIFLHLYGSHPITCDRLTDYPKMFDDDKLPKRYFNVNCYVSSIKKTDELLKRVYDLLV
                     KNQENHQRSFSMVYLSDHGLSHEVSKENIVIHNGKDRSKLHYDIPLFKISSDDTQRNE
                     YKAFKSGLNFTNGIANWIGIENPLLDKEINLFNEQNDKSDYGLKKIIETQSTVEDPAV
                     PIPESYLYKATN"
     gene            complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXF40_000677"
     CDS             complement(19667..20518)
                     /gene="tsf"
                     /locus_tag="PXF40_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HDL5802049.1"
                     /translation="MAEITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKS
                     GQAKAAKKAGRVAAEGVILARVASGFGVLVEMNCETDFVAKDAGFLELANEVADFAVA
                     NKGTTIEALQAQFEEKRAALVAKIGENMNIRRVQYLEGEVIAQYLHGAKIGVLVAGAG
                     SEDELKKVAMHVAASKPEFVNPEDVSADVVAKEREIQIEIAMNSGKPKEIAEKMVEGR
                     MAKFTGEVSLTGQPFVMDPSQSVGQYLKSVNTSVSNFIRLEVGEGIEKVEEDFAAEVA
                     KITGGNA"
     gene            complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXF40_000678"
     CDS             complement(20614..21333)
                     /gene="rpsB"
                     /locus_tag="PXF40_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005645552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HDL5802050.1"
                     /translation="MAQVSMRDMLNAGVHYGHQTRYWNPKMKPFIFGARNGVHVINLE
                     KTLPLFNEALAELTRIASNNGKVLFVGTKRAASDAVKAAAVESQQFYVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQTQDGTFDKITKKEALMRTRELEKLELSLGGIKDMNGLPDA
                     IFVIGADHEHIAIKEANNLGIPVFAIVDTNSTPDGVNYIIPGNDDATRAIQLYLDSAV
                     AAIKEGRGVETVEVAEEASAE"
     gene            21678..22706
                     /locus_tag="PXF40_000679"
     CDS             21678..22706
                     /locus_tag="PXF40_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5802051.1"
                     /translation="MKKTLSALAIAAATFTSTSTLAANEVNVYSYRQPYLIEPMLKNF
                     EKDTGIKVNIIFADKGLVDRVKQEGELSPADVLLTVDISRVMEIVNADLAQKIDSKVL
                     EKNIPAQFRDSNDQWFGLTTRARVIYTSKDRVGKLPAGFDYLDLAKPEYKGKVCVRSG
                     KNSYNVSLFAAMIEHYGIEKTKAFLEGLKANLARKPQGGDRDQVKAIKEGICDYSIGN
                     SYYYGKMLDDEKQKSWAEAAIINFPSGEHGTHKNISGVVIAKHSPNKANAVKLIEYLS
                     GEKAQGLYAELNHEYPVKEGIEPSAIVKGWGTFKSDTIKLEDIAKNYEAALKLVDEVK
                     FDDFSEKK"
     gene            22829..24475
                     /locus_tag="PXF40_000680"
     CDS             22829..24475
                     /locus_tag="PXF40_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5802052.1"
                     /translation="MRSQFCWKSIAALTTFIVLLPLIAICYHALQGDNENLAHLWQTM
                     LPIYLKNSTLLVLGTVFLALIFALPTAWIVANYRFWGQRTLQWLLCLPLAMPAYLIAY
                     LYTDLLDYSGAFQGWLRSIFGWTHPQDYWFPQIRTLYGACFVLALVLYPYIFLLVRVA
                     LLEQSENLTHSAKMLGASPSQLFRRITLPLIRPSVAVGIALVAMETLGDFGTVAYFAV
                     PTLTTAIYDSWLGYHDLGTASQIAIFMLLMIFLFLSLEQYSRRKQKSYQRGYEKKSAF
                     KFLTGWKLALALAWCWGLLALAFFIPFGRLLYWAYDYFEQAWNLDFVQFSLNSLKVSI
                     IASVITVLIALLLHFSKRLNTRKILVKNDRLSLQLASLGYAVPGTVLAIGLLSPLTFA
                     DHQLHAWLKSLELSPVGLIFSGSLFALVLAYTIRFLAMAIGSLETSLNKISPSLDMAS
                     QTLGKNGSAMLVKIHIPLIYKGILTAGLMVFIESMKELNASLLLRPFNFDTLATYVFT
                     FTSDEQLERAALPAIVLVLVGLLPVIWLTRSLISQSEKER"
     gene            24485..25495
                     /locus_tag="PXF40_000681"
     CDS             24485..25495
                     /locus_tag="PXF40_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5802053.1"
                     /translation="MSVLTINHLNLNFGSTKVLQNLHLAVNQNEIICLLGASGCGKTT
                     LLKAIAGLLPIEQGDIHLAGECLKSKAVEERQIGLIFQDYALFPHLTVADNIQFGLSK
                     LPKVQQKAITEKMLSVVHLQGFESRFPHELSGGQQQRVAIARALACQPELLLLDEPFS
                     NIDSQTRYAMIQEIKQILKSQNVPAIFVTHSKEEAFAFADKIAVMDQGKIIQFGKPNE
                     LYHSPVNPFVADFLGGTNYLNCNVTEDNVLCSPIGEFRLFPEMNVQKGRYRWLLRPEQ
                     IILKPNELGLGKVVGKLFLGLYYRYQVEIKGIEIVTYQSQELKIGEQVEVGFQVREFI
                     LF"
     gene            25505..26131
                     /locus_tag="PXF40_000682"
     CDS             25505..26131
                     /locus_tag="PXF40_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HDL5802054.1"
                     /translation="MKIEVWSDYACPFCYIGKRHLEQALAQFEGEVEVVFRAFELDPH
                     ANGEPEGDIQQRLMRKYQKTAEQADEMIRYVEQAGKQAGLDLRYRTTQYTRTFEAHRL
                     AKFAESKDLGEAMVERLFKAYFTDNTILAKRTELISLALDIGLERDEIAQLLTGDDFG
                     HEVREDERVAHKYGIHSVPFFVINEKLGVSGAQPPEILLDAIKQALQK"
     gene            complement(26193..27683)
                     /locus_tag="PXF40_000683"
     CDS             complement(26193..27683)
                     /locus_tag="PXF40_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HDL5802055.1"
                     /translation="MSLYQIARTETGKVISLNAKMANRHGLIAGATGTGKTVTLRKLA
                     ESLSDDGVPVFLVDVKGDLSGSVQAGNFSGKIAERILQFNLGGEDYLKGYPVSFWDVF
                     GTSGIPLRITISEMGPMLLSRLLNLNDTQGGLLNLVFRVADDRGLLLIDLKDLRALLK
                     FVADNAKEFQLEYGHISAASVGAIQRALLRLENEGADNLFGEPALDLHDWIQTRNGRG
                     VINMLNAEKLINSPRVYSAFLLWFMAELFENLPEVGDPEKPTFVLFFDEAHLLFDDAP
                     KALVDKIEQVVRLIRSKGVGVYFVTQNPLDIPDSVLGQLGNRIQHALRAFTPRDQKAV
                     KSAAETFRANKEVNVVEAITQLGVGQALVSVLDEKGMPTPVEIAYIYPPKSQLAPLAT
                     GERDSLVKQDDLYHHYSQYVDNESAFELLNAKAEAIKAEQAAAEEANNDFFGGILSSI
                     FGSKKKKDQSITEQVVSQVAHSVGRNLRNQVTKQIMRGILGAITKK"
     gene            complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXF40_000684"
     CDS             complement(27742..28977)
                     /gene="rhlB"
                     /locus_tag="PXF40_000684"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HDL5802056.1"
                     /translation="MSNHLTEHRFIDFPIHANVLNALDSKGFEFCTPIQAKTFPITLK
                     GKDIAGQAQTGTGKTLAFLIATFNHLLNNEIETSKNQPRALILAPTRELAVQIGADAE
                     LFLKHSDLKLALAYGGDGYDKQVQEIEKGVDILVGTTGRVIDYVKQGIINLDKIQVIV
                     LDEADRMFDLGFIKDIRYLMRKAPKPSERLTLLFSATLSAKVRELAYEDMDNAEYIEI
                     EPLQKTGHRIKEELFYPSNEDKMALLLTLLEEEWPERCMIFANTKHKCEEIWQYLSAD
                     GHRVGMLTGDIPQKKRLSLLDNFTKGNLDILVVTDVAARGLHIPDVTHVFNYDLPDDK
                     EDYVHRIGRTGRAGESGHSISFACERYAVNLPAIEEYIGHQIPVSQYDKESLLTLPKV
                     NRSRSKKTFLAKTKKNSRN"
     gene            complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXF40_000685"
     CDS             complement(29065..29787)
                     /gene="recO"
                     /locus_tag="PXF40_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HDL5802057.1"
                     /translation="MTIDQWQRAFVLHRREYSENSLLVEFFTEHHGRITLLAKGARRA
                     RSPLKAVLQPFTPLLLRWSGKGDLKTLTKAEPAALTLPMETLSLYSGFYINEVLARVL
                     ENQTAYPELFQHYLRCITELATQKQIEPILRTFEFHTLKALGYGVDFTHCAATGLPVD
                     PKMTYQFQENQGFIASLLQNNQSFLGSDLLAFAQLDFSEKSTQQAAKRFTRMALKPYL
                     GSQPLKSRELFQSILPNKLKSG"
     gene            complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXF40_000686"
     CDS             complement(30017..30934)
                     /gene="era"
                     /locus_tag="PXF40_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013525392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HDL5802058.1"
                     /translation="MTEQIQTPAKTYCGFIAIVGRPNVGKSTLLNKILGQKISITSRK
                     AQTTRHRIVGIHTEDQYQAIYVDTPGLHIEEKRAINRLMNRAASSAIGDVDLIIFVVE
                     GTKWTEDDEMVLNKLRSAKAPVLLAINKIDNIKEKEELLPHITELSQKFDFAEILPIS
                     AQRGKNVHILQKFVRQSLRQGEHHFPEEYVTDRSQRFMASEIIREKLMRFTGEELPYS
                     VTVEIEQFKMNERGVYEINGLILVERDGQKKMVIGAGGQKIKTIGIEARKDMERLFDN
                     QVHLELWVKVKAGWADDERALRSLGYMDE"
     gene            complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXF40_000687"
     CDS             complement(31037..31711)
                     /gene="rnc"
                     /locus_tag="PXF40_000687"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HDL5802059.1"
                     /translation="MQLERLQKKLGYQFHNLDYLIQALTHRSAATKNNERLEFLGDSI
                     LNFTIGKVLYDKFPKANEGELSRMRATLVREQTLAIIARKFDLGDYLKLGPGELKSGG
                     FRRESILSDCVEAIIAAIYLDQDMAKAMEKVEDWYSDLLKDISPGDSQKDPKTRLQEF
                     LQGRKLPLPEYDVLDIKGEAHNQTFRVTCKVINVEEVFIGIGTSRRKAEQNAAEKALA
                     VVKTKK"
     gene            complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXF40_000688"
     CDS             complement(31757..32716)
                     /gene="lepB"
                     /locus_tag="PXF40_000688"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HDL5802060.1"
                     /translation="MAQFMPIIFLGIIYGIWQWLDSMQLPNTISIILVALVIICGGFW
                     AFYKFSADPRRKQAIVLQQKRLGRELTAEEIAEIQPKSAVGEFFASLFGILFFVTVLR
                     SFLFEPFQIPSGSMEPTLRVGDFLVVNKFSYGIKDPIWQNTLIETGKPERGDVIVFKA
                     PAQPHVDYIKRVVAVGGDKIKYDFATQQLTVTKANGETKVFEYSEGKPNPEFFYHGEM
                     QVERTEKGNVTHQILNHPMAFNYAPYFYQQEGQAEGEWVVPQGYYFVMGDNRDNSEDS
                     RFWGFVPERNIVGKATFIWLSLDKKANEFPTGLRFSRMFTSIN"
     gene            complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXF40_000689"
     CDS             complement(32803..34596)
                     /gene="lepA"
                     /locus_tag="PXF40_000689"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018345454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HDL5802061.1"
                     /translation="MQNIRNFSIIAHIDHGKSTLSDRLIQTCGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLNYKAKDGEIYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAIEIDLEVVPILNKIDLPAAEPERVAEEIEDIVGIDAIDAVR
                     CSAKTGLGIEDVLEEIVKKMPAPEGDAEAPLQALIIDSWFDNYLGVVSLVRVKNGVLK
                     KGDKIKVMSTGQSYNVDRLGIFTPKQVDTTELKTGEVGWVVCAIKDILGAPVGDTLTH
                     HHNPATEVLPGFKKVKPQVYAGLFPISSDDYEAFRDALGKLSLNDASLFYEPETSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVVQTSGETIYVDSPSKLPA
                     INNIAEIREPIAECNMLVPQEFLGNVITLCVEKRGVQTNMVYHGNQIALTYEIPMGEV
                     VLDFFDRLKSTSRGYASLDYGFKRFQTADMVRVDIMINGERVDALAIIVHRANAAYRG
                     RELVEKMRELIPRQQFDIAIQAAIGNHVIARSTVKQLRKNVLAKCYGGDVSRKKKLLQ
                     KQKEGKKRMKSLGNVEVPQEAFLAILHVGKD"
BASE COUNT         9954 a         7592 c         6445 g        10768 t
ORIGIN      
        1 gtaatgtccc ttttttgaat gtctactaca aaatgggata ttttacaaac cgattgacta
       61 atgaagcaag aatataatta actacaactg gatatatttt gcaaatttcc cgataaattt
      121 caccgcttgt agataaaaac cgtagataaa aaccatagat aaaaaatagg agctaaacat
      181 ttttagcccc taccgtcatc agaaataaat cccgactaaa atcgccacga acacacctaa
      241 gccgaaatag tggttattta gaaacgcttt aaagcattcg ctacgttctc tttttttggt
      301 cagccaacat tggtagataa acagcgtggc acttaaggct aatacgacaa aatagccgat
      361 gtgataatct tttaccacgc ccaataaccc caataaaatc aaggtgataa actgtaataa
      421 cgcaataatt ttattatcgt attgagcgaa taaaattgca gtggatttaa ctccaattcg
      481 taaatcatcg tcacgatcaa ccattgcata ttgggtgtcg taggcgactg tccacgctag
      541 attggcaaaa aacagcagcc agcattcaag tggaagagtt tccgttaccg caccaaatgc
      601 catcggaatc gaccaaccga atgccattcc aagcactact tgtggcaagt gggtaaaacg
      661 cttcataaag ggataaatca ccgccagaaa aactgccaca aaggaaagca gaaacgcata
      721 gcggtttagc attaaatcga gcagaaaagc gaacaacagc aagatggcaa aaatgacttt
      781 tgcctcagtg gtggtcactc tgccggtagc taatgggcgt tgagaggtgc gtttaacgtg
      841 tccgtcaatt tctctatcgg cataatcatt aatcacacaa cctgccgcac gcataacgat
      901 taccccaagg gtaaaaatgg ctaaaatcgc aacaggcggc attccctctg cggcaataaa
      961 taacgcccat agtgtggggt gtaataataa taacgtgccg atgggtttat cgaaacgcat
     1021 taactgggcg taggcaatcc atttttgttt agaaaaaaga gtttcgttat tcattacaaa
     1081 ttttgacgat aacgtccgat tggcttaaat gagtctgtaa ttctaacggt aaatcttgat
     1141 ctgtaaacaa ataatttact tctttaacat ttcctaaacg tgcaatagct gtacgggtaa
     1201 actttgaatg atcggtcact aaaaccactt gtcgggaaca ttccattaat gcacgcttta
     1261 cctgcacttc gtggtaatcg taatcgagca tagagccgtc catatccacc gcactaatgc
     1321 ctaaaatccc aaagtccaaa cggaattggt taataaagcg aaccgtttct tctccgatta
     1381 gcccgccatc acttcttagc cctctgcctg ctaccgtaat ttggcaatct tcattttgca
     1441 tcagaatatg agccgcattt aaattattgg taactacttt taaattttta tgcgaaagta
     1501 aggctaatgc cactgcttct gaagtcgtgc caatatctaa aaataatgat gctccatttg
     1561 gaatcagttt tgccacctgt tgggcaatcg catttttctc gtgtgagaaa aattgcttgc
     1621 ggtgggtgta atcactattc tccgtattgg aaggagcggc tgccccaccg tgatgacggc
     1681 gaatcagatt attttctgcc atttcattca gatcacggcg aatggtttgc ggactcacat
     1741 tcaattcagc cactaattgc tcggtactca catagccaag ctgattaacc agctcaatga
     1801 tctttttgtg tctgtttgcc tgtttcatat ttcctctttt gcaaataatt tgcagaaaaa
     1861 gaccgcttgc aagcggtctt ttttcagtta aattttacaa tttatcaaca agttcaaccg
     1921 catagccgat atagcttgcc ggtgtcatct ctttcaaacg atttttttca ttttccggaa
     1981 tttccaactt atcgataaac tcacgcattg cggtttcatc aacccgtttg cctcgagtca
     2041 gctctttaag tttttcatac ggtttttcaa tgccataacg acgcataaca gtttgaattg
     2101 gctctgccaa tacttcccag ttttggttga gttcatcacg caagtgttgt tcattcactt
     2161 ctaatttgct aatacctttt aaggtggacg cataagcaat taacgcataa cctaaaccta
     2221 cacctaaatt acgcaacacg gtggagtcag ttaagtcacg ctgccagcga gaaatcggca
     2281 atttttgccc caaatgagcc attaccgcat ttgccaagcc aagattgcct tcggaatttt
     2341 caaaatcaat cgggttcact ttatgtggca ttgtgctaga gccgatttca ccggcaatag
     2401 tgcgttgttt gaagtgattt aaggcaatgt agccccacat atcacgatca aaatcaatta
     2461 aaatcgtatt aaaacgagcc acgcaatcaa agaactccgc aatataatcg tgcggttcaa
     2521 tttgggtggt gtatgggttc cacgtcacac ctaacgattc cacaaattct tggctgaaag
     2581 tgtgccaatc aatctccgga tatgctgata aatgtgcgtt atagttgccc actgctccat
     2641 tgattttagc gagaatttct aaattttcta actgtttata ttggcgttgt aaacgatatg
     2701 ccacatttgc catctcttta cccattgtgg tcgggcttgc cggctgaccg tgtgtgcgag
     2761 aaagcaacgg aatatgttgg taacatttcg ccagctctgc tacagcatca atcacttttt
     2821 tccattcagg taataatact tcttcacgag cggttttaag cattaaagcg tgcgaagtat
     2881 tattgatatc ttcagaagta caagcaaaat gaataaattc attcaccgct tgtaattcag
     2941 gcaacgcttc acatttctct tttaggaaat actccaccgc ttttacatcg tggttggtgg
     3001 tacgttcaat cgttttaatc cgattggcat cttctaacga aaaatcagcc acaatttggt
     3061 ttaggtaatc gtttgctttt tcagaaaaca ctggaacttc attaatttgt gtatgcgatg
     3121 ccaatttttg taaccagcga acttccaccg tcacacggaa ttttaataag ccaaattcac
     3181 taaaaatcgg acgaaggctc gcaactttgt cttgataacg tccatcaatc ggggataacg
     3241 cagttaaagc ggtaagttcc attgttttat attctccaaa taggtaaatg ttcggttaga
     3301 tttgacgata aaatttctgt gcttggttaa aaattttctt gcgtgaaaat aaaaattgcc
     3361 aacggcttcc gccgacttgc tgccacaaaa taccggctcg aataccggct agtagcgagg
     3421 ctcgaatttt attctgtata tccgggcgaa ccaagtaatc ttgcattccc atcacgtgaa
     3481 ttttcgtacc taacgggctg ataatatcgc tataaatagc ggctaaattg gcaatcattt
     3541 gatctgccat cacattatct tcatacaggg ctaactggcg ttccacttgc tgtaaacgct
     3601 gggctaactg ttgttttgct tcagggtttt tattgagttt ttggctaagg gcgagcaggc
     3661 ttatccaata acgtccgact tcggtatcta atttgccgtt accgccgcca gtttgagcta
     3721 atgcggtttc taagcccatt tttaaatggg aaagatcatc gccaaataca cttaacgttg
     3781 attccggctg agtgattaac aggctttcta aagcacactt aaaagcctct ctgtctgcca
     3841 tgcctttatg tgcaaattgt tgcactaacg tcgccgcttg gcaaacgccg gcataagcaa
     3901 gggtaatatc gtggtaatcc gccatctctg taaaattcaa tatgataaaa cattagtggg
     3961 aatatagcat tttttcagct tcttttgaat ggcaaaaggc atttattcta ttgaaaaata
     4021 aatgcctttt cattaatacg caatttgctg caaaaactat cctaccaatc gcccattatc
     4081 tattcgataa accacatcaa atttatccag tccgctttgg cggtgagtga tcataattaa
     4141 ggtgcgatca cagcagtgag tcaaaattag gtttaaaatc tgctgttcgg tttctctgtc
     4201 cagtccttct gttggctcat caagtaagac taattcagca gaactcagga gcaaacgggc
     4261 aagccctaaa cggcgttgtt cgccaccaga aagcggtctg ccgccctcgc ctaaccataa
     4321 atttaagccg tctgtttcaa gcaaatgccc taagcctact tttcttactg cttcttgcat
     4381 ttgttcgtct gtagcttgag cattccccat taataaatta tcttttaggg tttggctaaa
     4441 aatatgcact cgttggctta aggtaactaa ttttgagcgt aacatcggct ctgaatattc
     4501 gtcaatttta caattattca gccaaatttg accgcttgta gggtcgtagt tgcggtttaa
     4561 cagttggaat atggtcgatt ttccgctacc cgttttacct aagattgcca ctttctgccc
     4621 ttttaatacc ttaaaggaaa gattatttag tacgttttgc tcgccgtaat aagcaaagct
     4681 cacgttttca cagcgtacaa gcggttgatt ttggctcaaa ttttgccatt ctgccttgct
     4741 accaaatgtt acattaggct gttgttcggt aatttcacta atccgctcgg cggcggtaat
     4801 cacttgccct aaatgcaaaa aggcgatacc aatcggggaa agaatctccg ccgatgccat
     4861 tacacagaaa atcactaacg caattaaggc ttcagggtat tttgcagtgg gcacattaat
     4921 cgaagttgaa accaaataga tcaccacaca agtcaaaatg ccgttggata acattatcaa
     4981 gctatttgat aagccggaca gtcggctttc tttgctttga gcgttcagcc attgttgttc
     5041 agtttgctgt agtttttcgc tcatttggtt caagttgcca aagagtaaaa attctgcatt
     5101 taactgtacc cactcaataa attggctgcg gtaatttgct cggctttgta ttgcattacg
     5161 ccctaatttc aaacccaatc gataaaatac ggtaggaata acggcaagca ataccaatag
     5221 tgtgccgcaa atgatcagca ttaatggcac ggaaacaaaa gaaagcccga ttgccataaa
     5281 tgcaataatc atcactgcac tgacaaaagg cgagactaaa ttcagatata gggtgtctaa
     5341 cgtatccaca tctgccacca agcggtttaa caattcgctg tttctaaagc gatttagccc
     5401 gcttggactc agtggaatca attttttaaa gacgctagca cgcaaattcg ccaatacccg
     5461 aaaagtcgca tcgtgggtga ctaaacgttc aaagtaacgt gaaattgtcc gccctactgc
     5521 caaccctctc acccccgatg aagggtagaa aaagttaaaa ataagcgcat tgccggctag
     5581 aaatgaggca gctaaaaacc aaccggaaag gctgagcaaa ccgatacttg ccgctaatcc
     5641 taaaattgcc agcacaacac ctaataatag tcgcccaaaa tgggtttggt agagagcaaa
     5701 aaacgggaac aacgatttca ttagatttct ccctgatgca ctaattcatt atgtattaat
     5761 tccgcaaaaa agccggtgtg ttctaattca gtgaaacgac ctttctgaat gatttgccct
     5821 tgtttcatca cccaaatttc atcgcattgg gttaaatctt ccactcgatg agtaatcatt
     5881 agcgttgttt gctctcggct gagattatgc agagcggcta acacttgctg ttccgaatcc
     5941 atatcaaggc ttgcagtcgg ctcgtctaac agtaataatt cgtacgggcg aagcaacgct
     6001 cgtgcaatcg caatccgctg tgcttgcccg ccagagatac cgatattact gtcttgcact
     6061 tgatgctcca accctaaacg tgccacaaat tcatcggctt ttgaaagctg taatgccttg
     6121 gctaattcag aatctgtcgc attagggttg cctattaaaa tattctcttt caaactgcca
     6181 tgcattaatt gcggattttg ccccacccac gctaatttcg ctcgccattg gcttaaattt
     6241 aaatctcgca gttcggtgcc gttaatcgta accgaccctt cataaggcaa gaaaccaagt
     6301 aacatattca ttaatgaact ttttcctgca ccactttgcc caaccaaagc gatatgttgg
     6361 tgtgcattca actcgaaatt taacgcttgg gttaaggctt tgccttgtgg tgagaagatc
     6421 acgcaatctt tggcttgaat cacaagcggt tgattttcaa cattttcttg caaattgcca
     6481 ccttgcgttt tcaccttttc ttttaagaaa gtttcgatat tatctgcggc actaatcgct
     6541 gctgccttgt cgtgataaaa cacgccaagt tcacgcatcg gttggtaaaa ctcaggtgcc
     6601 accattagac aaaagaagcc gataaataag gtcacgcccg taccataata gccaaaatcc
     6661 agctcaccta aaaaaataaa gccaaaatag accgccgtca ccgcaatcga taccgccgtg
     6721 aaaaactcca ataccgcaga ggataaaaac gccattttta gtacgtccat cgtactgatt
     6781 cggaaatctt cggtgctttg gtagatttgt tcagtctgct tttccgcttg cccaaataag
     6841 cgaatggttt ctaaaccttt taatttatct aagaactgtc cgctaatacg ggaaagaatg
     6901 ccgatattac gctgatttgc ctccactgct ttcattccgg ctaaaatcat aaataaaggt
     6961 aataatggca ttgttgcaaa taaaatagcc cctgctgccc agttaatcgg gaatacaaaa
     7021 cagaggatca gtaatggcac tatcagcgat aaaaattgct gtggcaaata gcgtgcgtag
     7081 aaattatgta gattttccac ctgctcgagc attaaggttg cccagctgcc cgccggtttt
     7141 tgttgaatgc tcatcggccc gactgcttcc attttggcta gaatttggcg gcgaagatgt
     7201 aaacgcaagg tttgccctgc tttgaaaccg acacgctcac gcagaaaaat gaagaatgct
     7261 ctggcagcaa aacaacagaa taagagcata atttcaacca gaaagctatt cggtgactgc
     7321 tttccgataa gcattttgtc taacattgtg gcaatcagcc acatctgtcc aatcatacat
     7381 aaactactga aactccctaa cagtatgttt aagtgcatat attttttgat gactttttgc
     7441 tgacttttaa gccatttttg taattcgcgt tggcgttgtt tttccataat tttgtcaatt
     7501 tttttgtttt ttcaaccgct tgtaaatcgg gtttgccatt ctactataaa gcaaaaaggt
     7561 tgttaatggc gaaacattaa caacctttca ttcagcctta actagaatag ctcgtcaaat
     7621 tcaaagcgat acattaaatc taccgcttgg ttaatacttg agacccattg taagtacaat
     7681 cttggcgtta aattatagcg taaggttaat tcggtaagcg gtgcaaaaat gcccacgcca
     7741 tacttcactc tgaatttagg ggcaaggctg gcacttactt ctactttggt gttatcgcca
     7801 atacctgcgg tggtcacgct taaatctttg agtccgaaag tgctaccaac atcacccacc
     7861 aatttactgc tttttgataa gctcatactg agtaatgccg ctgcgactgc attactggag
     7921 ctggtatcgc cactgctttc caatgaacga ccagttaaaa tataggaaag tgcttcattt
     7981 tgcgacattg ccggatcaga gaatactttt accgttggat tgtctgccaa accggtcact
     8041 cttaccccag ctgtaatggt cggatcttcc attgcctccg gattgcgtat agcttcaata
     8101 tctaaggttg gctgagacgg tgagccggca aaactaatat cacctttacg aatcagcaag
     8161 tcttgaccat aagcggcaaa tcgtccttca cgcaaatgaa cttgcccgta aagccctaaa
     8221 ccttgtttgc cttgcctgac agacaataag ccattcacgt tactgtttaa accataggct
     8281 ttgagtttga catcattacc gatgttaatc ttaatatctg cattaattgc cattccacct
     8341 gaggtttgag ccggaatatt acgttggcta aacggcactt tatttttcac agagccgtcc
     8401 ataatcacct catctccact tacactgacc gcactttcag gtaactgctc gacttcaatt
     8461 cttgcccaag ggatatctac atttccactt aaggttaaaa gagttggcgt tgccgtcact
     8521 tgaatatccg ggctaactgc cacttttgcg atattaggaa tatccacttg gaaacggtta
     8581 gcttgagcgt gaacccgtgt tttccacgca tttagatctc gccagtctgc atcaccctcc
     8641 aaacgcagtt cgctttgttt ggtttgtaat ttaccgctta aagtcgatgt tgccccgtgg
     8701 aaattcattg ctaaattccc acctgtaata tcaaacggca ttgtaacaga gcgagctttt
     8761 aactctgtaa cgtttagatt tccgtgcaat aacggagagg ttgcggtgcc gctcacggta
     8821 agacgagcat tcacattgcc atcaaccgaa tcgccccgtt caagtagcgg tcgaatcagc
     8881 tttaagctta attggtcaag atgaatattg ccggataacg cacgagcctt acttaaatct
     8941 ttcatcacta aatcagtcga aagtctgccg ttattttcga cccttaaatc agatttaagg
     9001 gttaaattat tgtcagacat tttcagatca attttaagcg gtgaaacggt gagtgggaaa
     9061 ctttttcccc cctccatttt ttgaataaat ttaatcgcat tagaggttaa atccagattc
     9121 acttgaggct gtttgttttt aaaccaagct gcatcgcctt tggcattcac aatccctgaa
     9181 agctggctgt ttttctccaa aaattgttgc aataccgcta aatcaaagtt acggatttca
     9241 aaaggcactt taccctcaac accggcatta aatgcagtcg ggaaacaaag attaattttc
     9301 cggttatgcc aacaatgtgc ggaaatattg gcgttaatgg ctttattgtc atatttcaca
     9361 ttcactgctt tatctgcttg gaattgacca aactcggtgg attgaatcga aacttggctt
     9421 aattgccctt cccaaatttc tttcaaacgg tcaaattttc cagaaatttg caaatcagca
     9481 ccaaccggat tgccttttgc acttaatttc aagctatgat tttcttcatt tccttttagc
     9541 aataaagtgg catttcccac tttgatttca ttataggcaa attgacgtaa ccccaaggtt
     9601 aaatcccctt gaatggtttt ctcagtggta attttgcctt ttgcggttaa attttgcagt
     9661 ttaaattgct catagcctac atttgaggcc actaaatcta aatcaatgtt aggttctgaa
     9721 accttacccg ataatttggc attaccattc acgctggctt ttaaattcgg cactaaccct
     9781 tgcaaattag gggctttaat atccgcatag aaatcagatt tttcgcctaa cacgcctttt
     9841 aaatcgatct tattttcacc atacaccagc gataagcccg gaacatctaa aagttgttga
     9901 tgatcggctt ttaaattacc gcttaagtgt agatttttct gtaataacga acctttaata
     9961 tcaatattcg agacgtccgc tttccatccg ctagctgaat tgccccgtcc tgcataacct
    10021 tcggaagata aagaaccgga caataccgcc ggccagtctg ccagtaggga tttagtgtta
    10081 atatgctgaa gtttcaaatt tgaacgccac gcaacgccct cgctccaatc cactaaaccg
    10141 tcgatcttcg ccgtaccttc cagcgtattg agacttaaat cttgtatatt aaaatgggtt
    10201 aattcccctt tgccagttaa actagccgag cttgcaggca cgcccattcc tttggcactg
    10261 actttagcct ccaaagcgta atccaggaga ttgccattaa gcctcatggc gatattctct
    10321 aaactcagca catcaccatt ttgctgagga gcaaacggat aacgcattga ctcactcttc
    10381 agcgataaat caaagggagt tttcgcctga gccagtgcaa cattgccctc caacgaggcg
    10441 ctaattgcac cagccgtctt cacttttagg ctggttttgt catatagctc accggaaaga
    10501 gaggcttcaa tttgattgaa cggcaatttt actttcgccg tttttgcctc gtgaccactt
    10561 agcgtccaac ttagcggata attatcttgt aacgataaag aaccgcttgc ggttagatcc
    10621 ccttggtcgc ttttgaaatc taaacttttt aggttgatat gctgatcttt tgcttgagcc
    10681 tgaagctgta aagaggcaac atttaacaat gagatcggct caatcaaatt ccctttttca
    10741 tctttagctt tttgagcaat cgctacattc gcaatatcaa tctgttcaat attgagatca
    10801 agaggcaaac taaagcgaat atttttatcc aataacggct gtgctaattg tgctttaatc
    10861 gctgcccaat ccactttatt atccacctgt tcggcctgtg caacagtttt tctctgtaat
    10921 tggtgaaagc cctctacgac tttttcactg gttttttcca ccgcctcttg aatcacttta
    10981 tcagcaatct cttgtggatt tgtcgctgat aacgcctctg tttttgcatt tttttgtgca
    11041 aaatcgaccg cttgttcagt atcagtttcg tctaacttta aggctaaaag cagatttagc
    11101 ccctctaact gtgtcgggtg aacggtaata gcccgccctt taccagaaag tgcagtgtgg
    11161 aaatgattaa gatgaatatc catatcatca actttgacct tgatattctc taaattgata
    11221 ttttgagctg aaatccccaa tggcaaattt aattcggtga aaggttcggt ctcttctttt
    11281 ggctgagaag ggggtaattt agtcgtatca atcaacacct ctgtatcttt aaggctgaga
    11341 ttattcaaac acatttcata gtggagcaag cagctaaaac caatatgcag atctgcttgc
    11401 ccaaccgtta cattcacacc gtccatcaca aatcgggcat cagaaagctg taacccatct
    11461 tgcaggctac cttgcacttg cccaagttgt aatggctcta cgaatttatc tacccagctt
    11521 aacactttac gttgcccgta acctgtgcat agaaagagaa tggcgagtaa aagtagaata
    11581 aacgtcagac aaaagccgtg cttcaaaaac cgccactttg attttttagg ctgtgttgct
    11641 tgtggctctt gtgctgagtc cgtttgattt gtggctgttt gtttattttc gtcagtcata
    11701 atcgtgcata tttatgaggt gataaaaagt aaacaagcgg tatgcgaaat tttactgaaa
    11761 ttcgaccgct tgttttcatt tacagatcgg aacctaaacc aatataaatt tgtattcctt
    11821 tggaattatc tggtgatttt accggcgtgg cgacatcaaa tttaatcgcc ccgataggtg
    11881 atgcccaacg cacccctaag cccgtaccgt agtagagatc ctgagttttg aatttattcg
    11941 atgccaagcc tgcatcataa aaaattgcac cccaccaatt agggtaaacc tgatactgat
    12001 attctactgt gcctgtggct aaatgagagc ctccgacacg tttgccatta ctcggatcac
    12061 ggggggaaat atccttatag ccaaagcccc gcacactcat atcgccaccg gcaaaatagc
    12121 gtaacgccgg tggaatacgt tcaaattgat tggctttcaa ataccccaac tccgccctta
    12181 aatagaaccg atggttatca aagtaagttc tcgcccaaga tgtcgaggct ttataactat
    12241 aaaagtttac atctgaacct actgcacgac tcccccagtt taccgttaat ttttgtgtat
    12301 ccccccataa tgggtaaggc ttgccatctg ttctggttcg attcaatgat gccgttgggt
    12361 aaactaataa ggttttaaat cgatcattag cttgagtaaa agaatcgtaa cgggctttta
    12421 aaccaacaga aaatgaccaa ccggtttcgt gagtccagaa acgttgtaag ccaagggtgg
    12481 cagcggttga ttttgtatcg ttttgatctt cgttttctaa agtgccggat aattggtaat
    12541 aataatgtag cggatcttct ctaagtggaa tattataacc aaattcaaat gtctgctccg
    12601 gcttagaaac gtacgttcgg ctttcaatac tatgacctcg gctatttaac caaggtttct
    12661 tccagttaag ctgtaacctt gggccaactt cagtttcgta gcctatccca atttccactt
    12721 cattgcgttt tttaggctga aataacacat ttaaatccac taatttatcc tgttcattta
    12781 aatgtgactc aaccatcact gatgaaaacc aattactgga aaggtaatct tgggttaaaa
    12841 tcgaaagatc gttagctaaa tatggctcac cggaatgaat tttaagaata ttttgcaaat
    12901 attcttcttt gatttggcta tcaacaaacc ggatttgtcc ataatggtat cgttttccgc
    12961 tatcatagcc taaacgccaa tccgctttat gatcggtcgg ataaacttcc aaacggtgat
    13021 aaagccaatg accgtcaaaa taccctttac taaaagcggt actttcaata tcacctttaa
    13081 aattatcata ggttttatgg tttaaacgac taccttgttt tggggcttta ctgactagat
    13141 gagcgaaatc ttcgtccgtt tttgcatcgc cttgcaaaac aatatcggtt tcatcaattt
    13201 ttaccgtctc tttatctagc tcaacattta atactaagag cggtttcttt ccctcttgag
    13261 gtagctgcac aaattggtat cggctattat aatagcccaa ggctctcaga gctttatcta
    13321 ctgtggtttg caccaaatat tgataacgct ctgaaccatc tgcatattca ttggcaattt
    13381 gatctaaata tagctccaca tttttcttgg catctttacc ctgaatgcct ttgacttcta
    13441 aagtgactaa tggctctatt tctggctcat catcactatc ttccgctaat ttttcttgca
    13501 gattttcaac tcgctcacga tctacgtcag acagcctttg ctcttgattt gcttgtgcca
    13561 ttgaagcaaa agccactaaa cagcagaatg ttaaaaaatg tagttttgta ttcattagta
    13621 acctttttat tcttttggaa tgccacgcaa aagcggaata ctgtcataag gcggaacaga
    13681 acttaacgct ggctcttgct caaagagcat aatgaatggt ttgtcaggca ctgttttttc
    13741 attacgccac aagtttccaa cactcaccaa ttcaatatct tgaggtagtt gtgctaaatt
    13801 ttgcttcagt acactaatcg tattcttgcg agggtgtcct atcaccaccg ctaccccgtt
    13861 ttttcgtgcg tgattaattg catgtgcaaa ctgtttttgt acatcagcaa gcagatcgct
    13921 atcatctaaa aaaatgtctc tctccagcgt attaatacca aattgacgag ccgttttagc
    13981 cgccacacta ctgccaatag ttttactgtc taaaaagaaa agcgtatttt cttttaacac
    14041 tttcaacaaa tgttgcattg tagcagagtc tgaagttgct ccactgccca tatggttatt
    14101 taaaccaata gcatatggta cttgaccacg agaagtatga ataagtttcc gaattttctc
    14161 ttcgttatca ccaatatgaa tacccccctc ttcaattggc tgtttcgatt taggttccat
    14221 tggcaaatga atcaaaatat cccgtttttg gttataagcg tcctttgccc gttctgttgc
    14281 atagggtgca acaggaataa tcgccacgct taccgccttg ggtaaggcta agatttctcg
    14341 atcttctttt attcgatagc ccacatcatc aattacaatc gccatttgag ctgcttgtac
    14401 aagcggtgta aaaagcacaa acatttgcaa aaaaatgtta aaattcaacc gcttgttaat
    14461 ttgtttaaac atctatttca ccaaatttag aggattaatc ggcgtgcctt tacgggtaac
    14521 accaaaatag agtgcagaac ggctttgtcc cccactgtta ccaaccttcg caataacctg
    14581 tccgccttgc actcggctac ccttgctgac tgaaatagat tggttatagc cataaaggga
    14641 aatatcacca ttgccgtggt caatcgcaac catattgcca taccctgcaa gccattgagc
    14701 cattatgact cgcccgctcg ccattgctct aaccgaagta ccggcagaag caccaatcac
    14761 tacaccgtgc caattattac caaaaggagt gataatattg ccagacaccg gcatcgtata
    14821 tcgaccagcc ttgatcggtg ttctctcaac attctcagtt gttttggact gaccggattt
    14881 tgcctgtttt tcccgctgtt gttcacgttt ttctgcttgc tgagcctctc tttgcgcttg
    14941 ttctaattgt tgttttagtg cctgttcatt gctgcgtaaa ttctctaatc ggctttgatc
    15001 ctgctcaagc gttttatcga ttaaacgtaa ggtactttca cgctggcttt gtactttctt
    15061 taaatctttc tcttgtttct tttgttcatt aagttgcgtt tgatgatctt tttgctggcc
    15121 tttcaattca tcacgtctgg ctttaagatc agcttgggtt ttacgaattt caacgatcgc
    15181 atcaatgcga atattattca tatgctgata ataagcggtc attctttccg cattttttgc
    15241 ctcttcagac attaaacgct ctaagaccga agggttcacc ccagaacggt aggcagagtc
    15301 caactgctct tttaattttt ctttctgctg tttttccaac ttttctaaac gggcaatttc
    15361 agtctcagtc gctttaatgg tctggcgaac ttccgttaaa gacatttcgg ttttttgtaa
    15421 tttatccaac accttcccca tttctacttc ttggtttttt agggtagatt gcaacgcatt
    15481 acgtttttgc ttttgttcat taatttttga ggtttgctgt tggatttttt gctgaatctg
    15541 attaagatta tttgcaaaag aaaaaggggt agaaaagctt attaccccac tgaaaatagc
    15601 agtccaacag taagaattta ttcgtttcac cagcatacct ttgtttcttc aaaatattat
    15661 taaggttata ttctaatcgg ttatttgctt aagatcagct ttttagtgaa agaatttaac
    15721 tatctatttc aaaatataaa gaattttgct ataaatagca caatttcaaa tccattaatt
    15781 ttactcaaag ctaaggagtc attatgcaat tagtatttat ccgtcacggt ttcagtgaat
    15841 ggaatgctaa aaacttattt accggttggc gtgatgttaa tttaacagaa cgtgggattg
    15901 aagaagcaaa atctgccggt caaaaattaa aagcagccgg ttttgaattt gatattgcgt
    15961 ttacttcggt tttaacccgt gcgatcaaaa cttgtaacat cgtattagaa gaatcagacc
    16021 aattatggat ccctcaagtg aaaaactggc gtttaaacga gcgtcactac ggtgcattac
    16081 aaggtttaga caaaaaagaa actgctgaaa aatatggtga tgaacaggtt cacatctggc
    16141 gtcgttctta tgacatctct ccaccggatt tagacccaca ggatccaaac tcagcacata
    16201 acgaccgccg ttatgctaac ttaccaaaag atttaattcc aaatgcagaa aacctcaaaa
    16261 tcacccttga gcgtgtgtta ccattctggg aagatcatat tgcacctgca ttaatttcag
    16321 gtaaacgcgt attagttact gctcacggta actcattacg tgcattagca aaacacatcg
    16381 aaggcatttc tgatgcagac attatggact tagaaatccc aaccggtcag ccattagtgt
    16441 atgaactaga tgacaactta aaagtaatca gcaaacgtta cttataattg gtaaatttcc
    16501 gataaaaaat aaccgcttgt agtgcaacac attacaagcg gttatttttt gttaattttt
    16561 tgcaaatggc aaagaacaaa aataaaggcg aatcatacat tcgccttatt gttttaaagt
    16621 agattagaaa tctaacaact ctttctcttt tgctgctaat acttcatcaa cttttttaat
    16681 gaaggtatcg gtgatttttt gaatatcttc ttcagctttg tgttgttcgt tttcgctgat
    16741 ttctttatct tttaataacg ctttgatttg gtcattagca tcacgacgaa cattacgaat
    16801 tgccactttg ccttgctcac cttctgcttt aacgattttg attaaatcac gacgacgttc
    16861 ttccgttaat ggtggaagcg gaacacgaat ggttgtgccg gcagaagatg ggtttaaacc
    16921 taaatctgag gttaaaattg ctttttctac cgcagagatt aaagatttat caaatacgtt
    16981 taccgctaaa gtacgggcat cttcagctac cacgttcgct acttgacgta atggagtcgc
    17041 agagccgtaa tattccactt gaataccgtc taataaagaa ggttgggcac gacctgtacg
    17101 aattttcgca atatgccctt ttaaagcctc aaggcttttt tccatacgat cttgggtatc
    17161 tttcttgatt tcgttaatca ttgatttttt atccttttat ttagtaactg agagttaaac
    17221 agagaaaatt aattattcag aaatggttgt accttcttca gtaccgaata ccacattgcg
    17281 taacgccccc ggtttgccca tattaaagac acgaattggc attccgtggt cacgagcaag
    17341 cgtgaatgct gctaagtcca ttacttgtaa ttcttgctca ataacttgcg catacgttaa
    17401 tttattatat agttttgcat ctgcgtattt tgctgggtct ttatcataaa cgccatcaac
    17461 tttagttgct tttaatacca catcagcttc aatttcaata ccacgcaagc aagcagctga
    17521 atcggtggta aagaacgggc tacctgtacc ggcagagaaa atcaccacac gtttttcacg
    17581 caacatttta attgcttcag accagttgta agtgtcgcaa atcccattta attggaacgc
    17641 agacattaat ttagcattta cctctgcacg gtgtaaggca tcacgcatag ccaaaccgtt
    17701 cattacggtg gcaagcatac ccatatggtc gcccactaca cggttcattc ctgctttggc
    17761 taattttgca ccacggaata agttaccgcc gccaagtacc acaccaacct caacgccttc
    17821 agcaagtaat tctttaatct ctaacgccat acgatccaaa atagacgggt cgataccaaa
    17881 accttcactg ccttgtaggg cttcaccact taatttgaga agaattcgct tataaatagg
    17941 tttgctcatt ttaattgcct cttaactgta tggactaaac acaaaattac gttattatag
    18001 aacaatccaa tataacgata aactaaaaat attcactaca atgaaatcca aacaactttt
    18061 cggcattctt gtcgctattt cgctggcaac tgctgctagc tgtttaatgc taatcggatc
    18121 aggctttttt ccaaatccga gtatctttga agtcattttg ggcgtattcc tcatcatcgc
    18181 tcttgccagc tctaaatgga cttattattt actcttactg ccaatcagca tcgcttatgc
    18241 aatttatacc ccggttggga taaaattcgg taaaccgact tacgagtata tcgcctctat
    18301 ttttgctacc gatatgatgg aaagcaaaga gtttattgct caactgccga ttttaaatat
    18361 tgcggcgggc attgcgattg tactagcggt cattttttat cgaaaaatta ccaatcgcta
    18421 tcaaatccgt tttttacgca ataaaacatt cgtgatttcg gcttttgtat taatgctgtt
    18481 ttcccttgca ccgtttaaat tttttcagga gttctacaat tcgagcctaa aggtaaagaa
    18541 agaattggaa gtgctgaaca atttaacgct agattcacaa tggggacaat caaccctcag
    18601 ctcaacttca aactacgatg attatgtact gattatgggc gaaagtgcga gaaaggatta
    18661 tcaccacgcc tatggctatc cggctgccaa tacgcctttt atgagttcgg caaaaggaac
    18721 cttgattgac ggtttaacct ccggtggcac aaacactatc gcctcattac gcttaatgct
    18781 cactaagccc gatacggaaa aatgggaagc aaattatggg ttaaccttaa ttgatttaat
    18841 caaatctacc ggtatcaaga cctattggat ctcaaatcaa ggctatttgg gcaattacga
    18901 tacgccgatt tcctctatcg gtaataaaag tgatgtcaaa attttcacta aagccggcga
    18961 ttcattaaat accaatgtga gcgattttga attgttaccg cattttgcta aagtgattga
    19021 agaacctgct caagggaagc gtttcatctt tctgcattta tatggctcgc atcctattac
    19081 ctgcgatcgt ctcaccgatt acccgaaaat gtttgacgat gacaaactgc caaaacgcta
    19141 ctttaatgta aattgctacg tgtcatctat caagaaaacc gatgaattgc tgaaacgggt
    19201 atatgatttg ctagtgaaaa accaagaaaa tcaccagcgt tcattctcaa tggtttattt
    19261 gtctgatcac ggtttatcgc acgaggtttc aaaagagaac attgttatcc acaatggaaa
    19321 ggatagaagt aaattacact acgatattcc gctgtttaaa atttcaagcg atgataccca
    19381 acgtaatgag tataaagcct ttaaatccgg cttaaacttc actaatggta ttgcgaattg
    19441 gattggtatc gaaaatccgt tattagataa agaaattaat ctttttaacg aacaaaacga
    19501 taaaagtgat tatgggctaa agaaaatcat tgaaacgcag tctactgtag aagatccagc
    19561 tgttcctatt cctgaaagct acttatataa agcgactaat tagcaaaagt aagtaacaaa
    19621 aaagcaggct ttaagcctgc ttttttagtt tttagtatca gaaaaattaa gcgttaccgc
    19681 cagtgatttt cgctacttct gctgcgaaat cttcttctac tttctcaata ccttcaccta
    19741 cttctaaacg aataaagtta gaaactgaag tatttactga ttttaaatat tgacctacag
    19801 attgagatgg atccattaca aacggctgac cggttaatga aacttcaccg gtgaatttag
    19861 ccatacggcc ttcaaccatt ttttctgcga tttcttttgg tttaccagaa ttcatcgcaa
    19921 tttcaatttg aatttcacgt tcttttgcta ctacatcagc agaaacatct tctgggttta
    19981 caaattcagg tttgcttgca gcaacgtgca ttgctacttt cttaagctca tcttcagagc
    20041 ctgcacctgc tactaataca ccaattttcg caccgtgtaa gtattgagca ataacttcgc
    20101 cttctaagta ttgaacacgg cgaatgttca tattctcacc gattttcgca actaatgccg
    20161 cacgtttttc ttcaaattgt gcttgtaatg cttcgatagt tgtaccttta tttgcaactg
    20221 caaaatcagc aacttcgttc gctaattcta agaaaccggc atcttttgca acgaagtcag
    20281 tttcacagtt catttcaact aatacgccaa aacctgaagc gacacgagca aggattacac
    20341 cttcagctgc aacacgacct gcttttttag ccgctttcgc ttgaccggat ttacgcatat
    20401 tatcgattgc taattcaata tcaccgttcg cttcaactaa tgctttttta cattccatca
    20461 tacctgcgcc ggtacgttca cgaagttctt taactaatga tgctgtgatt tcagccattt
    20521 taaattcccc ttatttgata tggtaaaaca ggctctcacc tgcctagaaa tttcattgtt
    20581 tagggcaggt taaaacctgc cccctcaact gaattattcc gcagaagctt cttctgctac
    20641 ttcaacagtt tcaacaccgc gaccttcttt gattgcagca actgctgaat ctaagtaaag
    20701 ttggatagca cgtgttgcat catcgttacc gggaatgatg tagttaacgc catctggagt
    20761 tgagttagta tcaacaatcg caaataccgg aatacctaag ttgtttgctt ctttaattgc
    20821 gatatgttcg tgatcagcac cgataacaaa aattgcatcc ggtaaaccgt tcatatcttt
    20881 gataccgcct aagcttaact ctaatttttc taactcacga gtacgcatta acgcttcttt
    20941 tttagtgatt ttgtcaaaag taccgtcttg agtttgagtt tctaaatctt ttaagcgttt
    21001 gattgattga cgaactgttt tccagttagt caacatacca cctaaccaac ggtggtttac
    21061 gtagaattgt tggctctcta ctgccgctgc tttaacagca tcacttgctg cacgttttgt
    21121 accaacaaat aatactttac cattgttact agcaatgcga gttaattccg ctaatgcttc
    21181 gttgaataaa ggtaaagttt tttctaagtt gattacgtga acaccattac gagcaccaaa
    21241 gatgaatggt ttcatttttg ggttccagta acgtgtttgg tgaccatagt gaacgcctgc
    21301 gttaagcata tcgcgcatag aaacttgtgc cataagaatt ttccttcaaa gttgtttgtt
    21361 ttgccactta tgaacggcaa aacggggttt agcctccaca tatcctagaa aatcaatctg
    21421 ttaaagacac cccaattcct agcttgtgat atgtgtgtgt tttagtgtta aaaaataaat
    21481 gtgtacgttt tgcctgaata gacaaaaacg gggcgtatta tgccaaaaaa caaacaattt
    21541 gccaattatt ttattgctct cttcgcatta ctaaatcaag ctcaaaaata aaaaccgttc
    21601 tcattattga ctaaaaaaat ggggaggttt agaatgtctt tcattctgtt atgaaaacct
    21661 gtctgaagga gactatcatg aaaaaaacac tttctgcact tgctattgct gcagccactt
    21721 ttacatcaac ttcaacgctt gctgcaaatg aagtgaatgt ttattcttac cgccagcctt
    21781 acttaattga gccaatgcta aaaaactttg aaaaagatac tggcattaaa gtaaacatca
    21841 tcttcgctga taaagggttg gttgatcgtg taaaacaaga aggtgaatta agtcctgctg
    21901 atgtgctttt aacagtagat atttcacgcg taatggaaat tgttaacgct gatcttgcac
    21961 aaaaaattga ctctaaagtg ttagaaaaaa atattcctgc acaattccgt gactctaacg
    22021 accaatggtt tggtttaacc acacgtgctc gtgttatcta cacgtcaaaa gatcgtgtag
    22081 gtaaattacc agcaggcttt gactacctag atttagctaa accagagtat aaaggtaaag
    22141 tctgcgtgcg ttcaggcaaa aactcttaca atgtctcact attcgcggcg atgatcgaac
    22201 attacggcat tgaaaaaacc aaagcattct tagaaggctt aaaagcgaac ttagcacgaa
    22261 aaccacaagg tggtgaccgt gatcaagtaa aagcaattaa agaaggcatc tgtgattact
    22321 ctatcggtaa cagctactac tacggcaaaa tgttagatga tgagaaacaa aaatcgtggg
    22381 ctgaagcagc gattattaat ttcccgagtg gtgaacacgg cacgcacaaa aacatcagcg
    22441 gcgtagttat tgcaaaacac tcaccaaata aagcaaacgc ggtgaaatta attgaatacc
    22501 taagtggcga aaaagcacaa ggtttatatg ctgaacttaa ccacgaatat ccagtaaaag
    22561 aaggcatcga gccatcagca atcgtaaaag gttggggtac gttcaaatca gataccatca
    22621 aacttgaaga tatcgcaaaa aattacgaag ccgcattaaa attagttgat gaagtgaaat
    22681 ttgacgattt ctctgagaaa aaataatcaa ccgataagcg gtcatttttc cacaaaaatt
    22741 tgcaaaattt tgttaaaata caaccgcttg caaaaggacg cattttgcgt ccttttattt
    22801 ttttatgaaa taacaggctt aaagaaaaat gcgatcacaa ttttgctgga aaagtattgc
    22861 tgccctaaca acttttatcg ttttgcttcc tcttattgca atttgctatc acgcattgca
    22921 aggggataat gaaaaccttg ctcacctttg gcaaacaatg ttgccaatct atcttaaaaa
    22981 ctcaacttta ttagtattag gaaccgtttt ccttgcactg atttttgctc tgcctaccgc
    23041 ttggattgtg gcaaattacc gtttttgggg gcaaagaacc ttacaatggt tactttgttt
    23101 gcctctcgct atgcctgctt atttaattgc ctatttatat accgatttat tagattactc
    23161 aggtgctttt caaggctggc tgcgtagtat ttttggctgg actcatccgc aagattactg
    23221 gtttcctcaa attcgtacat tgtatggtgc ttgctttgtg cttgcgttag tactatatcc
    23281 atacattttt ttattagtgc gagttgcctt attagaacaa tctgaaaact taacacacag
    23341 tgcaaaaatg ctcggggctt cgccctctca gttgttccgt cgaattacgc tgccattaat
    23401 tcgaccttct gttgccgtag gcattgcatt agtggcaatg gaaacgcttg gcgatttcgg
    23461 tactgtggcc tattttgccg tgccaacact tactacggca atttatgatt cgtggctagg
    23521 ctatcacgat cttggtactg ccagccagat tgcgatcttt atgttgctaa tgattttcct
    23581 gtttttaagt ttagagcaat atagtcgccg taaacaaaaa agctatcaac gtggctatga
    23641 aaagaaatca gcctttaaat ttttaactgg ttggaaatta gcattagccc ttgcttggtg
    23701 ctggggttta ttggcgttag cctttttcat tccgtttggc aggttgctct attgggcata
    23761 cgactatttc gagcaagcgt ggaatttaga ctttgtccaa ttttcgctta atagtttgaa
    23821 agtatcgatc atcgcctccg tgataacggt actgattgct ctacttctgc atttttctaa
    23881 acgtttgaat acccgcaaaa ttttagtcaa aaatgaccgc ttgtcattac aacttgcctc
    23941 actgggctat gcggttcctg gcacagtatt agcgatcggt ttactttcgc ctttaacatt
    24001 tgccgatcat caactccatg cttggctaaa aagccttgaa ttatcacccg ttggattgat
    24061 tttttcaggc tcactctttg cattagtatt agcttatacc atccgatttt tagcaatggc
    24121 aattggcagc cttgaaactt cgctaaataa aatctctcca tcgctggata tggcgagcca
    24181 aacgcttggt aaaaatggct cagcaatgtt agtaaaaatt catatccctt taatttataa
    24241 aggtatttta actgcaggat taatggtctt tattgagagt atgaaagagc taaatgcttc
    24301 tctgctactt cgcccattta attttgatac actcgcaacc tatgtgttta cctttacatc
    24361 agacgagcag cttgagcgtg ctgctctgcc tgccatcgta ttggtgttag tcggtttact
    24421 gcctgttatt tggcttacca gatcccttat ttcgcaatct gaaaaagaaa gataaaggaa
    24481 ttttatgtct gttttaacta ttaatcatct caacctcaat ttcggcagta caaaggtttt
    24541 acaaaatctc catcttgctg tgaatcaaaa tgaaattatc tgtttgctag gtgcaagtgg
    24601 ctgtgggaaa actacactgc tcaaagccat tgcaggttta ttgccaattg agcagggaga
    24661 tattcattta gcgggtgaat gcctaaaaag taaagccgtg gaagagcgac aaatcgggct
    24721 gattttccaa gattacgctc tttttccaca cttgacggta gccgataata ttcaatttgg
    24781 cttatccaaa ttgccaaaag tacaacaaaa agcaattacc gaaaaaatgc tttcagttgt
    24841 gcatttacaa ggctttgaaa gccgttttcc acacgaactt tcgggcgggc aacaacagcg
    24901 tgtcgctatt gcccgagcat tagcctgcca gccagaattg ctactgttag atgagccgtt
    24961 ttccaatatt gacagccaaa ctcgctatgc aatgattcaa gagatcaagc aaatcttaaa
    25021 aagccaaaat gtgcccgcta tttttgtaac ccatagcaaa gaagaagcct ttgcatttgc
    25081 cgataaaatt gccgtgatgg atcaagggaa aattattcaa tttggtaagc caaacgagct
    25141 ataccattct ccagttaatc catttgtggc agatttttta ggtggcacaa actatcttaa
    25201 ctgtaatgta acggaagaca acgtgttatg cagccctatt ggcgagttcc gactcttccc
    25261 tgaaatgaac gttcagaaag ggcgttaccg ttggcttctt cgcccagaac agattatctt
    25321 aaaacccaat gagctaggtt taggtaaagt ggtaggcaaa ctgtttttag gcctatacta
    25381 ccgctatcag gttgaaatta aaggcattga gatagtaact taccaatctc aagagctgaa
    25441 aattggcgaa caagtggaag tgggcttcca agtaagagag tttatcctat tttaaggaga
    25501 atatatgaaa attgaagttt ggtcagatta tgcctgcccg ttttgttaca tcggcaaacg
    25561 ccacttagag caagccctag cccaatttga aggcgaggtt gaagtggttt tccgagcctt
    25621 tgagcttgat ccgcacgcta acggcgaacc ggagggcgat attcagcaac gcctaatgcg
    25681 gaaatatcaa aaaaccgcag aacaagctga tgaaatgatt cgttatgtgg aacaagccgg
    25741 caaacaagct gggctagatt tgcgttaccg caccacccaa tacactcgca cctttgaagc
    25801 tcatcgcttg gcgaaatttg cagaaagtaa agacttaggc gaagcaatgg ttgaacgttt
    25861 attcaaagcc tattttaccg ataacactat tctagctaaa cgcacagagc ttatcagttt
    25921 agccttagac attggcttag agcgtgatga aatcgctcaa ctgctcacag gtgatgattt
    25981 cgggcacgaa gtccgtgaag atgagcgagt cgctcacaaa tatggcattc acagcgtacc
    26041 gttttttgtg atcaatgaaa aactcggggt atccggggct caaccgccag aaatattact
    26101 tgacgctatc aaacaggcat tgcaaaaata atccgaaaaa agaccgcttg ttaagctaaa
    26161 caagcagtct tattcttctt ataatttaca atttattttt tggtgatcgc acctaaaata
    26221 ccacgcataa tttgtttggt gacttggttg cgtaaatttc tgccaactga atgcgccact
    26281 tggctaacca cttgttcggt aatcgattga tcttttttct tcttcgagcc aaaaatggaa
    26341 gagagaatac cgccaaagaa gtcattgttt gcttcttctg ccgcagcctg ctctgcttta
    26401 attgcttctg ctttcgcatt aagtaattca aacgcagatt cattatcgac atattggctg
    26461 tagtgatgat agagatcatc ttgcttcact aaactatcac gttcgcctgt ggctaatgga
    26521 gctaattggc tttttggtgg atagatatag gcaatttcta caggcgttgg catacctttt
    26581 tcatctagca ccgaaaccaa cgcttgcccc acaccaagtt gcgtgatggc ttctaccaca
    26641 tttacctctt tattcgctcg gaaagtttcc gctgctgatt ttaccgcttt ttgatcacgt
    26701 ggcgtgaaag cacgcaaagc gtgttggata cgattgccaa gctgccctaa tactgaatca
    26761 ggtatgtcca acggattttg cgtaacaaaa taaacaccca ccccttttga gcgaattaaa
    26821 cgaaccacct gttcaatttt atccaccaat gccttagggg catcgtcaaa caataaatga
    26881 gcttcatcaa agaataaaac aaacgtcggt ttttctgggt cgccaacttc tggcaaattc
    26941 tcaaagagct ctgccataaa ccaaagcagg aatgcactgt acactcttgg tgagttaatt
    27001 aatttttctg cattcaacat attgattaca ccacgcccat tacgggtttg gatccaatcg
    27061 tgcaaatcta atgcaggctc accaaataaa ttatctgccc cttcattttc aagccttaat
    27121 aacgcacgct gaatagctcc aacgcttgct gcagaaatat gcccatattc cagttggaat
    27181 tctttcgcat tatctgcgac aaatttaagc aacgcacgca aatcttttaa atcaattagc
    27241 aataaacctc tgtcatctgc cacacgaaaa acgagattta acaagcctcc ttgggtatcg
    27301 tttaaattga gtaaacgaga aagtaacatc ggtcccattt cggaaatagt gattcgaagt
    27361 gggatacctg atgtaccaaa tacgtcccaa aacgaaactg gatagccctt taagtaatct
    27421 tctcccccta aattaaactg taaaatgcgt tctgcaattt ttcctgaaaa attacccgct
    27481 tgtaccgagc ccgaaagatc accttttaca tctactaaaa atactggcac gccatcatca
    27541 ctcaaagatt ctgccaattt gcgtaaagta accgttttac ctgtacccgt agccccagca
    27601 attaaaccgt gccgatttgc cattttggca ttaagcgaaa taactttgcc tgtttctgtt
    27661 cgagcaattt gatacaaact catctttcat tctcttaaag gtaaattaat tttttgttct
    27721 catcatataa aaatttatca cttaattacg gctattcttt ttcgtttttg ccaagaacgt
    27781 ttttttactt cttgagcggt tcactttcgg taaagtcagt aaggattcct tgtcgtattg
    27841 actcacagga atctgatgcc caatatactc ttcaattgca ggcaaattaa ccgcataacg
    27901 ctcgcaagca aaactaattg aatggccgct ctcccctgct cgccccgttc taccaatacg
    27961 atgaacgtaa tcttctttat catcaggcag atcataattg aaaacgtgcg tgacatctgg
    28021 aatatgcaat ccacgagccg caacatctgt taccactaaa atatccaaat tgcctttggt
    28081 gaaattatcc agcaaagaaa ggcgtttttt ctgcggaata tcgccggtta gcattccaac
    28141 ccgatgtccg tctgccgata aatactgcca gatctcttcg catttatgct tggtgttggc
    28201 aaaaatcata caacgctccg gccactcttc ctcaagcaat gtcagcaaca atgccatttt
    28261 gtcttcattc gaggggtaaa atagctcttc tttaatacga tgtccggttt tttgtagtgg
    28321 ctcaatttca atatattccg cattatccat atcttcatag gcaagttccc gcacttttgc
    28381 cgaaagcgtt gccgaaaaga gcaaagttaa acgttctgaa ggcttaggtg cttttcgcat
    28441 taaataacgg atatctttaa taaaaccaag atcaaacatt cgatctgctt catctagcac
    28501 aatcacttga attttgtcta aattgataat gccttgtttt acatagtcaa tcactcgacc
    28561 tgttgtaccg acaagaatat ctaccccttt ttcaatttct tgaacttgtt tgtcgtaacc
    28621 atcaccaccg tatgccaaag ctagttttaa atcagaatgt tttaaaaaca gctcggcatc
    28681 tgccccaatt tgaaccgcca attcacgggt tggagcaaga attaatgctc tcggctgatt
    28741 ttttgacgtt tcgatttcgt tattcaataa atggttaaaa gttgcaatca aaaaggcaag
    28801 cgttttccct gtacctgttt gagcttgccc tgcaatatct ttgcctttca gcgtaatcgg
    28861 aaaggttttt gcctgaatcg gcgtacaaaa ttcaaagcct ttgctatcaa gggcatttag
    28921 tacattagcg tgaatcggga agtcaataaa gcggtgttcg gtaagatgat tagacatagt
    28981 atttccttga taattgtgat gtgacaagcg gtctttttta cacatttttt tgcaaaatag
    29041 catattgggc gttttttctc aaatttaacc gcttttgagt ttattcggca aaatagattg
    29101 gaaaagctct cggcttttca gcggttgtga ccctaaatag ggctttagtg ccattcgggt
    29161 aaaacgtttc gctgcttgtt gagtactttt ttctgaaaaa tccaactgag caaacgctaa
    29221 taaatcactg cctaaaaagc tctggttatt ctgtaataat gaggcgataa agccctgatt
    29281 ttcctgaaat tgataggtca ttttcggatc aactggcaaa ccggttgccg cacagtgcgt
    29341 aaaatccacc ccataaccca atgcttttaa cgtatgaaat tcaaaggtgc gtaaaatcgg
    29401 ctcaatctgt ttttgtgtgg caagctcggt aatgcaacgt aaataatgct gaaataattc
    29461 agggtaagcg gtctgatttt ccaatactct tgcaagtacc tcgttgatat aaaacccact
    29521 ataaagtgaa agcgtttcca tcggcaacgt taatgcagcc ggttctgctt tggttaaagt
    29581 tttcagatcc cctttacccg accaacgcaa caacaacggc gtgaacggct gtaaaaccgc
    29641 tttcaacggc gagcgagccc gccttgcacc tttagcaagt aaagtaatcc gcccgtgatg
    29701 ttcggtaaaa aactccacta ataaactgtt ttcgctgtat tcacgccgat gaaggacaaa
    29761 ggctcgttgc cattggtcta ttgtcataat ttcttgttaa ttatgaggtt gtaatttact
    29821 tctgccaaat ctccccctcc cctctttgct aaagagggga gatcttgcag agtatatttt
    29881 aaagtcattt tcactattta accttttata tagataggaa gatgaattta aaatttctgg
    29941 agaactagtc cccctcttta gaaaagaggg gttaggggag atttgattac gatattaatg
    30001 ctataacggg agccaactac tcgtccatat accctaaact tctcaatgct ctttcatcat
    30061 ccgcccaacc agcttttact ttcacccaaa gctcaaggtg cacttggttg tcaaataggc
    30121 gttccatatc ttttcgagct tcaatgccga tggttttgat tttttgcccc cccgcaccaa
    30181 taaccatttt tttctgacca tctcgttcta ctaaaatcaa gccattgatt tcatacaccc
    30241 cacgctcatt cattttaaat tgttcgattt ctaccgttac cgaataaggt aactcttcac
    30301 ctgtaaaacg cattagtttt tcacgaataa tttctgatgc cataaagcgt tgagagcggt
    30361 ctgtcacata ctcttcagga aagtggtgct caccttgacg cagtgattga cggacaaatt
    30421 tctgtaaaat atgcacattt ttaccccgtt gtgccgaaat tggcagaatt tcagcaaaat
    30481 caaatttttg tgaaagctcg gtaatatgcg gcagaagttc ttctttttcc ttgatgttat
    30541 caattttatt gattgccaat aaaacagggg cttttgccga acgcaatttg tttaacacca
    30601 tttcatcatc ttctgtccat tttgtgcctt ccacaacaaa gatgatgaga tctacatcgc
    30661 caatagcaga acttgctgca cggttcatta aacgattaat cgcacgtttt tcttctatgt
    30721 gtaagcctgg ggtatctaca taaatcgctt ggtattgatc ttcagtgtga ataccaacaa
    30781 tacgatggcg agtcgtttga gctttgcgtg aggtaatgga aattttttgt cctaaaatct
    30841 tatttaataa tgttgatttc cctacatttg ggcgaccaac aatcgcaata aaaccacaat
    30901 aggtttttgc aggagtttga atttgttctg tcattttgtt ttcctttcat tctgtggaat
    30961 gaatttgatg gtgcaagcgt ccacgcttgt accatttaat taaatcttta gcacaagcga
    31021 ggacgcttgc gctatcttac tttttcgttt taaccaccgc taacgctttt tctgcggcat
    31081 tttgttcggc ttttcggcgg ctggtgccaa tgccgataaa cacttcctcg acgttaatca
    31141 ctttacaggt tacacggaaa gtttggttat gagcttcgcc tttaatatct aatacatcat
    31201 attcaggcaa tggcaatttt ctaccttgta aaaactcttg caggcgggtt tttggatctt
    31261 tttgtgaatc gcctggactg atatctttaa gcaaatctga ataccaatct tccacctttt
    31321 ccattgcttt tgccatatct tgatcgagat aaatggccgc aataatcgct tcaacacagt
    31381 ccgataaaat cgattctcgg cgaaaaccac cactttttag ctctcctgga cctaatttta
    31441 ggtagtcgcc taaatcaaat ttgcgagcaa taatcgctag agtttgctca cgcacaagag
    31501 ttgctctcat acggctaagc tcaccttcat tcgcttttgg aaatttgtcg tataatactt
    31561 taccaatagt aaaatttaaa attgaatcgc ctagaaattc aagacgctca ttgtttttgg
    31621 ttgccgcact gcggtgtgtt aaggcctgaa tgaggtaatc aaggttatga aattgataac
    31681 ctaatttttt ctgtaatcgt tctagttgca tagtttatgt gaataaaggg gcgtatctca
    31741 tacgcccctg ttaagattaa ttgattgagg taaacattct agaaaaacga agccccgttg
    31801 ggaattcatt tgctttttta tctaaactta accaaataaa agtggcttta ccaacgatgt
    31861 ttctctcagg cacaaagccc cagaaacgac tgtcttcact gttatcacgg ttatcaccca
    31921 tcacaaaata gtatccttgt ggcacaaccc attcaccttc tgcttgccct tcttgttggt
    31981 agaaataagg tgcatagtta aatgccattg ggtgatttaa aatttgatga gttacattac
    32041 ctttttcagt gcgttctacc tgcatttcac cgtgatagaa aaactcagga tttggcttgc
    32101 cttcgctgta ttcaaatacc tttgtttcgc cattggcttt agtaaccgtt aattgctgag
    32161 ttgcaaaatc atatttaatt ttatcaccac ctactgccac cacacgctta atataatcaa
    32221 cgtgtggttg tgccggtgct ttgaatacaa tcacatcgcc tcgttctggt ttgcccgttt
    32281 caatcaaggt gttttgccag ataggatctt taatgccgta gctgaattta tttacgacta
    32341 aaaaatcgcc tacacgcaag gttggctcca ttgaaccact tggaatttga aacggttcaa
    32401 ataagaacga gcgaagtact gtaacaaaga ataaaatgcc gaaaagtgag gcaaaaaatt
    32461 cgcctactgc ggatttaggt tgaatttccg ctatttcttc agcggttaat tctctgccta
    32521 aacgtttttg ttgtagaaca atcgcctgtt tacgtcttgg gtcagcactg aatttgtaaa
    32581 acgcccaaaa tccaccacaa ataataacca aggcaactaa aataatggaa atagtatttg
    32641 gcagttgcat tgaatcaagc cattgccaaa taccataaat aatacctaga aaaataattg
    32701 gcataaattg tgccactgaa tgctcctttt tattcaaaat tgcaaagttt tctcaaaata
    32761 tgaccgcttg caagcggtcg tattttacac gaatattgac aattaatcct tacccacatg
    32821 aagaattgcc aaaaatgctt cttgtggcac ttctacgtta ccgagagatt tcattcgttt
    32881 tttaccctct ttttgttttt gtagcagttt cttcttacga cttacatcac caccgtaaca
    32941 ttttgctaat acgtttttac gcaactgttt taccgttgag cgagcaatga cgtggttacc
    33001 aattgccgct tgaatagcga tgtcaaattg ttggcgtgga ataagttcac gcattttttc
    33061 cactaattca cgtccacgat acgccgcatt tgcacggtga acgataatcg ccaacgcatc
    33121 aacacgctcg ccgttaatca taatatccac acgcaccata tcagccgttt ggaaacgttt
    33181 aaaaccgtaa tcgagtgaag cataaccacg agaggttgat tttaagcggt cgaagaagtc
    33241 taacactact tcgcccattg ggatttcgta agttaaggcg atttggttac cgtgatagac
    33301 catattggtc tgtacgccac gtttttccac acaaagggta atcacgttgc ctaggaattc
    33361 ttgtggcaca agcatattac attctgcaat cggctcacga atttctgcaa tattgttgat
    33421 tgctgggagt ttcgatgggc tatccacata gatcgtttcg ccactggttt gcaccacttc
    33481 gtaaactacg gtcggagcgg tagtaatcaa atcaagatcg tattcacgct ctaaacgctc
    33541 ttgaatgatc tccatatgca acaagcctaa gaagccacac cggaagccaa agcccaacgc
    33601 acttgaagtt tctggctcat agaacaatga cgcatcattt aggcttaatt tgcctaaagc
    33661 atcacggaag gcttcgtagt cgtctgaact aatcggaaat aaccctgcat aaacctgtgg
    33721 ttttactttc ttaaagcccg gtaatacttc agttgctggg ttgtggtggt gggttaatgt
    33781 atcgcccact ggtgccccta aaatatcttt aatcgcacaa actacccaac ctacttcacc
    33841 tgtttttagc tcggtagtat ccacttgttt tggcgtgaaa ataccaaggc gatctacatt
    33901 gtaagactgc cctgtactca tcactttaat tttatcgcct tttttcagca cgccattttt
    33961 cacacgcact aaagacacaa cgcctaaata gttatcgaac caagagtcga taattaacgc
    34021 ttgtaatggt gcttccgcat cgccttctgg tgcaggcatt ttcttcacga tttcttctaa
    34081 aacatcttca atgcctaaac ctgttttagc tgaacagcgt actgcatcaa tggcatcaat
    34141 gccgacaata tcttcaatct cttctgccac acgctcaggc tcggctgctg gtaaatcgat
    34201 tttatttaaa attggcacaa cctctaaatc tatctcaatt gcggtataac aattcgccaa
    34261 cgtctgtgct tccaccccct gccctgcatc aaccactaat aaagcacctt cacaagcagc
    34321 aagcgagcga gaaacttcat atgagaaatc cacgtgccct ggcgtatcaa taaagttgag
    34381 ctgataaatt tcgccatctt tcgctttata gtttaaggtt acactttgtg ctttaatagt
    34441 aattccacgc tcacgctcaa gatccattga atctaatact tgagcctcca tttcacgatc
    34501 tgataagcca ccacaagttt gaattaagcg gtctgataaa gtcgatttgc cgtgatcgat
    34561 atgagcgata atcgaaaagt tacgaatatt ttgcattttc atcgggcagt taatgtcctg
    34621 ttttgttatt tgtttatcaa aaattaatcg gggaattgta cttgaaatac aaggttttgc
    34681 aaagaaaaca aatagcaata agcggttatt ttttcctaaa aatgtgcaaa tttcttgaga
    34741 aaaatgaccg cttgcactc
//
LOCUS       DANMCL010000016        33726 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.016, whole genome shotgun sequence.
ACCESSION   DANMCL010000016 DANMCL010000000
VERSION     DANMCL010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 33726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33726
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.016"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(73..657)
                     /locus_tag="PXF40_000690"
     CDS             complement(73..657)
                     /locus_tag="PXF40_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoxide reductase heme-binding subunit YedZ"
                     /protein_id="HDL5802062.1"
                     /translation="MLTWLRILIHLGCLLPLVWVAQLLYTGNETILGADPIKELEHFL
                     GYGAIVIFCIMFLLGIALQYLKKNQYQILRRPLGLWAFVWAALHISSYLLLELSLDVK
                     LFFSELAGRPYLILGAAAFFILSIMAITSLPMLKRKLGTRWGTIHQWAYPALVLAMVH
                     YYWSVKSVTFDPIIIGVLVLFIVAHKIQAKFAKK"
     gene            complement(657..1610)
                     /gene="msrP"
                     /locus_tag="PXF40_000691"
     CDS             complement(657..1610)
                     /gene="msrP"
                     /locus_tag="PXF40_000691"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HDL5802063.1"
                     /translation="MKKLTIQDVTPETIFYQRRKIITALGLGIAASALPKVSMAETQR
                     HLQSLQFKPDPNKGLELTPENKVIGYNNFYEFGVDKSAPAKNAANFKTDPWTLEIGGE
                     VENPFSLNHQQLLNTFPLEERIYRFRCVEAWSMVVPWIGFELARLIEMAKPTSKAKYV
                     VFHTLYDPAQMPGQKNRLLGGGIDYPYVEALRLDEALNSLTLLSVGLYGKTLPPQNGA
                     PIRLVVPWKYGFKSIKSIVKITFAEKRPLTTWESLAPNEYGFYANVNPNVDHPRWSQA
                     SERVIGAGGLLSVKRQPTLMFNGYENEVANLYRGLDLKVNY"
     gene            1719..2285
                     /locus_tag="PXF40_000692"
     CDS             1719..2285
                     /locus_tag="PXF40_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL5802064.1"
                     /translation="MKSLSSTQIEEIRKQMVKFATLQLADKDLAEDVVQDALTNAYKH
                     SASFRREAALKTWIFAILKNKILDLLRTRKRHIPVSSLCEEEESPSAFFDRHDHWLEH
                     QDVTEWRGVAQSTYQKEFWAIFDICLNKLPAQQARVFMMREHLEMSSAEICQECEISL
                     SNLNVLLHRARLRLQECLSRNWFREESK"
     gene            2282..2467
                     /locus_tag="PXF40_000693"
     CDS             2282..2467
                     /locus_tag="PXF40_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5802065.1"
                     /translation="MKCRQATELISQSCDEKLRLQQHMRLQLHLLVCPKCRNFNKNTK
                     KLGKILRAYCNDKDAPF"
     gene            2497..2781
                     /locus_tag="PXF40_000694"
     CDS             2497..2781
                     /locus_tag="PXF40_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802066.1"
                     /translation="MRYWLISLSILLSGCVVPVTPTGQAGIPMPIIIGVSDPLDSKEV
                     HICTLKPFTQEYRSEHSSRGRAKLNVQKQCRANHSEMFCEEKDIVCKTYD"
     gene            2885..3928
                     /locus_tag="PXF40_000695"
     CDS             2885..3928
                     /locus_tag="PXF40_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5802067.1"
                     /translation="MQPINIAIAGAGFSSRVFHIPFLKQDARFNIVKVYERTSNNAAE
                     WLPNAETVRDFNALLTPEVDLVLITTPNQTHYAMVKESLLAGKHVLVEKPLVATVAEA
                     EELAELAKRQGKVLYVYQNRRWDSHIATAKSLMEQNLLGELVDCEIRFDRYAKEKNVK
                     VWKESGELGTGLVYDLGVHLIDQALYLFGKPEAVYADVRYQHEGALVDDNFDIQLYYA
                     NGFKVVLKASRYAREPSPTFVLHGKLGSYLKQTPDNQEDLLKNGVQPIGKDWNIEEKE
                     NWGILHTEVEGNVVRQPYRNAEVSYQNLFDDLYQAIAHNAEPIIKLEDVIFVLKVIES
                     VFESAKLGQKIYL"
     gene            4168..5274
                     /locus_tag="PXF40_000696"
     CDS             4168..5274
                     /locus_tag="PXF40_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HDL5802068.1"
                     /translation="MNKLIASLVASSCATAFAAPVQQNNFHTTTHTYEFTQSYDLVVP
                     QGSKGTTNLWIPLPSDTDYQTVKSIEFEGSYKNAYITENNAYGAKTLFATWDTDAPKR
                     DLKVKMVIQTQDREPMAQGALANYQMPEKITYSVDVLEYLKPTAHIKTDGIVKEYADK
                     IVGNEQNPLKKAELIHKWIVDNMERDNSVLGCGDGDVEKILTTKVLKGKCTDINSVFV
                     ALARASNIPAREVFGIRLGQAVKMGQYSKTAFGSSKDGVANESGGQHCRAEFYLAGFG
                     WVPVDSADVAKMRLAEKKDVDDADVQAVSKYLFGNWEMNWVGFNHGRDFDLYPQPELT
                     PLNNFGYPYAEVGGDPLNSFEAKEFGYEFISKEL"
     gene            5249..5617
                     /locus_tag="PXF40_000697"
     CDS             5249..5617
                     /locus_tag="PXF40_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802069.1"
                     /translation="MNSSLKSYNHKFITMCVTAIVSAVTSTFCCIGPLVYLVFGISSP
                     WLMELNQLEFLQLPMLLISLAAFGYGFWLLNFSNKIICTKYFSRRTLVILYWVVSVVV
                     MFFLTYPYVLPYILEMWSGE"
     gene            5619..5927
                     /locus_tag="PXF40_000698"
     CDS             5619..5927
                     /locus_tag="PXF40_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HDL5802070.1"
                     /translation="MKKYIATMLLAFGLVHSSYAQEKTAQIETKQAEKTVVLHIPEMY
                     CQLCVYLVNKELRAVEGVISTKASMKERKATVVVKESVDNQALIQAVGNLKYTAKVIE
                     "
     gene            6165..6719
                     /gene="srlA"
                     /locus_tag="PXF40_000699"
     CDS             6165..6719
                     /gene="srlA"
                     /locus_tag="PXF40_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725059.1"
                     /note="catalyzes the phosphorylation of incoming sugar
                     substrates along with their translocation across the cell
                     membrane; the IIC domain forms the PTS system
                     translocation channel and contains the specific
                     substrate-binding site; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HDL5802071.1"
                     /translation="MIEAITHGAEWFIGLFQKGGETLVGMINGILPLLISLLVVMNAL
                     IKFVGQDRIERLAQRSAGNPISRYLILPVIGTFVFCNPMTLSLGRFLPERYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLGLPLGPLAISYLLVGMFTNFFRGWI
                     TDFTTAFFEKRMGITLDREVHLSH"
     gene            6750..7751
                     /locus_tag="PXF40_000700"
     CDS             6750..7751
                     /locus_tag="PXF40_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HDL5802072.1"
                     /translation="MSNKAIYIEKGNGGWGGPLTLPVVEGKKVLYMTGGTRPAIVNKL
                     VELTGWEAVDGFKEGEPPAEEIGIAIIDCGGVLRCGLYPKRRIPTINIHSTGKSGPLA
                     EFIVEDIYVSAVKENNIRLIDADGSVPVATEQAKPTSSTTATAKEYDSSKKITEQSDG
                     LLAKIGMGMGSVAALFFQAGRDTIDTVLKTILPFMAFVSALIGIIIASGLGDVIAHGL
                     TPLANSPIGLVTLALICSFPLLSPFLGPGAVIAQVIGVLVGTQIGLGNIPPHLALPAL
                     FAINAQAACDFIPVGLSMAEAKQDTVRVGVPSVLVSRFLTGAPTVLIAWAVSAFIYQ"
     gene            7796..8194
                     /gene="srlB"
                     /locus_tag="PXF40_000701"
                     /gene_synonym="gutB"
     CDS             7796..8194
                     /gene="srlB"
                     /locus_tag="PXF40_000701"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HDL5802073.1"
                     /translation="MHRLSKRENIYMTIIYQTTFTKIGNFAQESLTDDMLITFKQGAP
                     ADLQDYCFIHNPSELSSPLEVGDIAEFDGVAYPITAVGSVASENLSALGHITFRFDGA
                     NDAEFPGSVHVIGTPPQGLTENSTLIIKRD"
     gene            8242..9030
                     /gene="srlD"
                     /locus_tag="PXF40_000702"
     CDS             8242..9030
                     /gene="srlD"
                     /locus_tag="PXF40_000702"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HDL5802074.1"
                     /translation="MNNEKKVAIVVGGGQTLGAFLSEGLADAGYRVVVADLNGENAQK
                     VAADINAKQGEGNAIGVQVDAADEPSVEALAKATDTVFGRADVLVYSAGTAKASPIWD
                     FNLNDFDLSVKVNLTGYFLTAKHFSRLMIRDGIKGRIIQINSKSGKVGSKYNSGYSAA
                     KFGGVGLTQSLALDLADKGITVHSLMLGNLLKSPMFQSLIPQYAAKLGIPESEVEQVY
                     IDKVPLKRGCDYQDVLNVLKFYAGEEAAYCTGQSINITGGQVMF"
     gene            9199..9579
                     /gene="gutM"
                     /locus_tag="PXF40_000703"
     CDS             9199..9579
                     /gene="gutM"
                     /locus_tag="PXF40_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HDL5802075.1"
                     /translation="MDSITLLIILAMIMWLLQAVLGWLQIKAFNQAFMEISKKGKVTV
                     GRNSGRFNPKSVIVLAFDDEKKVVDSLCMKGFSVFARPQKLASVIGLSLDQIVPEKIF
                     PSDKRSQFALKVAISSGYSCSDQK"
     gene            9642..10289
                     /gene="hxpB"
                     /locus_tag="PXF40_000704"
     CDS             9642..10289
                     /gene="hxpB"
                     /locus_tag="PXF40_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HDL5802076.1"
                     /translation="MQINSVIFDMDGVMIDSEPQWAEAQIAVLADLGINITEQDCEQL
                     TRGKRIDELSDTWIKKFQLSVSNQALSEAILAHGCAAIEQHGKALTGLYELLDFLKSN
                     QIKLAVATSSPPVVIKAVFDRLKLWDYFPIRCSAMDEEYGKPHPAVYLSAVKKLGIEK
                     QECIVIEDSVTGLIAAKAANLTTFLVNTDYQNEKFSIADKRMASLLDVIEKLKQH"
     gene            10332..11129
                     /locus_tag="PXF40_000705"
     CDS             10332..11129
                     /locus_tag="PXF40_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor"
                     /protein_id="HDL5802077.1"
                     /translation="MKPFERRQQILAYLAQHGRTEVDVLADYFKLTGATIRKDLTSLE
                     EDKKVLRTYGSVVLIDEEILEREEKINKEDKDDKPLAQKTGINLQQKQAIGQKAAELI
                     NEGNSIIFDAGSTVLQMIPHLKAFDNLSLMTNSLTIFNEILKLNKSYNLLISGGTFRE
                     KSASFHGYFAESAFIGSNFDILFIGTDGLDLDVGLTTFNEVYKVSSLMCDAANKIVLL
                     ADSSKFGRKSPNIVCGLEKIHTIITDEGLSQEMREQIKAKGIELLVV"
     gene            11140..12075
                     /locus_tag="PXF40_000706"
     CDS             11140..12075
                     /locus_tag="PXF40_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HDL5802078.1"
                     /translation="MNHLDSAKETLNLYAQQIITLNHRLSEEFNEVVNMILACQGRVV
                     VGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDD
                     VNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMA
                     LGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRDVMVRKVPTASLDTTFTECL
                     SVMNEGRMGVAVIMQDDKLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDT
                     EFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEFSS"
     gene            complement(12119..12669)
                     /locus_tag="PXF40_000707"
                     /pseudo
     CDS             complement(12119..12669)
                     /locus_tag="PXF40_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005752768.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            12971..14830
                     /locus_tag="PXF40_000708"
     CDS             12971..14830
                     /locus_tag="PXF40_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HDL5802079.1"
                     /translation="MSNLKVKVQGFGRFLSNMVMPNIGAFIAWGFITALFIPTGWLPN
                     ETFAKLVGPMITYLLPLLIGYSGGKLVGGERGAVVGAITTMGIIVGSEIPMFLGAMIV
                     GPLGGWAIKTFDKAIDGKVKSGFEMLVNNFSVGIIGMILAMLSFAFIGGIVTQISAAL
                     GAGVGALVEAGLLPVTSIIVEPAKILFLNNAINHGVFTPLGTAQAQEVGKSILFLIEA
                     NPGPGFGILLAYMFFGRGTAKQTAGSASIIHFLGGIHEIYFPYVLMSPRLILAVIAGG
                     ATGVLTNSLLGGGLIAPASPGSIFAILAMTAPGAHFAVVASVILSCAVTFAIASILLK
                     TQKGEASLEDAQAQTQAMKAESKGVVNGNINKIYVACDAGMGSSAMGASMLRKKVQAA
                     GLNIEVQNLAINDLPQDAQLVITHKDLTARATQRVATAQHLSLTNFLDSAFYDSLVAK
                     LANHQPQQAVQNTQNFANPVEEPQAEGLKLQAAQVFLGLQANSKEEAIRFAGEQLVKA
                     GFVQPSYVDAMFAREQMVSTYLGEGLAVPHGTSDAKDSVLKTGIVVCQYPNGVRFTDE
                     EDGVAKLVVGIAAKGNDHIQILSAITNALDDEQAMKTLTSTNDVEKVLALLSK"
     gene            14934..16073
                     /locus_tag="PXF40_000709"
     CDS             14934..16073
                     /locus_tag="PXF40_000709"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HDL5802080.1"
                     /translation="MNALHFGAGNIGRGFIGKLLADARIFVTFADINQTQIDQINQNK
                     QYGVKIVGDDSRVEIVKNIAAINSKDENAVIEQVKNTDLITTAVGPNVLGFIAPLFAK
                     ALVARVESGNTQPLNIIACENMVRGTTFFKGKIFEHLTAEQQAEIEKVVGFVDSAVDR
                     IVPPAEPNPADPLEVTVEEFSEWIVDQTQFKGDIPNIKGMELTDNLMAFVERKLFTLN
                     TGHLICAYLGKQAGVKWIKEAIAIEEIKTQVKATMEESGAVLIKRYGFDPQAHSAYIE
                     KILKRFANPYLNDDVNRVGREPIRKLSENDRLIKPLRGTLEYGLPYQNLVKGVVMALQ
                     YRNEEDPQAVELAEFIANHGVAAAVEKYTGLTDQAVIAQVVELYQ"
     gene            16085..16600
                     /locus_tag="PXF40_000710"
     CDS             16085..16600
                     /locus_tag="PXF40_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltR family transcriptional regulator"
                     /protein_id="HDL5802081.1"
                     /translation="MMDYIDKLSEETTLRGFLSIANQRFAKAVEQLIERVFRKTDFAL
                     KSVVDSLFEHQGPLADIEVRLKVLLGLGVISPKVFEDISLFLEVKQHLNEEEDEFAFS
                     HPAVVKFAKDLHHIDFLPINELLNMKASAANKDSMLFQMQQMRLEKMVRSSLILAVTE
                     IDEQLNVESPL"
     gene            16740..18605
                     /locus_tag="PXF40_000711"
     CDS             16740..18605
                     /locus_tag="PXF40_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HDL5802082.1"
                     /translation="MQSLLSFVPDFLKQELFWVMALLVFAIWQFIQNKLRMDVVALIV
                     MLFFSLTNILSVKEVLAGLSDPNVVLIALLFIVGEGLVRTGVANQVSDWLMRVSGASE
                     TKVLVLLMLCIAGLGSFMSSTGIVAIFIPVVLAICSGMGISPRRLMMPLSVAGLISGM
                     MTLIATPPNLVAHSELVKSGFEGFNFFSFTPIGLIILVMGIGYMLIARRWLDNGEQSN
                     THSQAQKFSMSQLIEEYQLKERAKMVLVEADSDCVGKSIGQLNLRIEQGLNIIAIQRT
                     KRFRKITVSASVNEIFQPKDILLLDTALDDETYQQRCEQLKLRPIELKGEYFSSQYRS
                     VGMAEISVMPEAECIGKTIRELKFRSRYHLSIVGLKRGDEIIQEELLDTPLKFGDILL
                     VMGVWQQIHRMDDDHRDFFLLRDPAESKNAPPALSQAPHALFSVLTMVLLMITGIVPN
                     VMAALIACLMLGKFRCVDMKSAYDSIHMPSIVLIVGMMPFSIALQKTGGVDLTVRLLL
                     DAMQGLDVHFVLIVLFVVTAIISAFISNTATAILVMPIAIAIANQLGYSPAPFVMTVA
                     VSASAAFMTPVSSPVNTMVLAPAGYKFIDFVKVGVPFTVLVMLVSVFVIPMLFPL"
     gene            complement(18895..19146)
                     /locus_tag="PXF40_000712"
     CDS             complement(18895..19146)
                     /locus_tag="PXF40_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802083.1"
                     /translation="MDKQAILKLFRDNSTAGNSQPSQEPIQVFNNSNVIIQNGDNATV
                     IAGCTVDNNTNLTCADKQRVHDLIHSLEQRNRASRDEGA"
     gene            complement(19158..19640)
                     /locus_tag="PXF40_000713"
     CDS             complement(19158..19640)
                     /locus_tag="PXF40_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5802084.1"
                     /translation="MKIECKKVIGFGNRIEQSRKNAKLSRSEVCDALGGIAISTLQAW
                     EADTREPPISKLMALSQILNVEPCYLLTGERHSQSLNVTREPQPVYATKPQTEEGEVV
                     VIKAKLQEAIETLEEVLEITQREMKPAGKAQMVWAFYELLTQEKSEKEKMVGLLKLVA
                     "
     gene            19824..20087
                     /locus_tag="PXF40_000714"
     CDS             19824..20087
                     /locus_tag="PXF40_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5802085.1"
                     /translation="MSTLEDIKKTAKDWHRADIIAALHKAGWSLRQLSLKHGYSQSST
                     LKNAVDRPWLKGERIIAEAIGISPEEIWPERYAQRNHKKFADR"
     gene            20103..20633
                     /locus_tag="PXF40_000715"
     CDS             20103..20633
                     /locus_tag="PXF40_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5802086.1"
                     /translation="MSENSLKTHYSAKELAELSLACLPKTKQGVLYQAKKQGWTTHKK
                     VGVGGEILEFALSNLPQEIQTEIRSRFMSAVVEAKPKKLPAVRAEVDVGNLTTKQREI
                     ADARMALVAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLVELVAVANAKKTAKRTIV
                     PIFSPIMPDFPLDSRD"
     gene            complement(20649..21776)
                     /locus_tag="PXF40_000716"
     CDS             complement(20649..21776)
                     /locus_tag="PXF40_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HDL5802087.1"
                     /translation="MNKLKSINLQVYIMLIAIVVIMSFFSIATDGAYLSARNISNLLR
                     QTSITGILAIGMVFVIISAEIDLSVGSLMGLLGGFAAISNVWWGWPLSLTIIVTLILG
                     VMLGAWSGWWVAYQKVPSFIVTLAGMLAFRGVLVGLTNGTTVSPISNEMTTIGQGYLP
                     DMVGMILGTIGIFCFIVWGSYQRKARQKLNLTVPSMSKDTLKYGLVAIIVLGAIYLLN
                     DYRGVPFPVLVLVILAIAGTFLARKTAFGRHIYAIGGNIDAARLSGISVEKVKLAIFA
                     LNGLLVAIAGLILSSRLGAGAPSAGQNAELDAIAACVIGGASLAGGIGSIYGVVIGAF
                     IIALLDNGMSMLDVPTFWQYIVKGGILLLAVWVDTISKKKA"
     gene            complement(21780..23294)
                     /gene="xylG"
                     /locus_tag="PXF40_000717"
     CDS             complement(21780..23294)
                     /gene="xylG"
                     /locus_tag="PXF40_000717"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HDL5802088.1"
                     /translation="MAKLLEMKNITKKFGEVVALNNISISLETGEILSLCGENGSGKS
                     TLMKVLCGIYPAGDYEGEIYFSGEKLIARNIKDTEEKGISIIHQELTLVKNMSILENM
                     FLGNEITKSGITDDNEMYLRCKTLLEQVQLDIDPNTKVGELGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEKETEILLSLIKDLQAHNIACVYISHKLNEVKAISDKICVIRDG
                     EHIGTRSAEGMSEDDIITMMVGREITSLYPHEPHNIGEEVLRVENLTAWHPTNTHIKR
                     VDNANFVLRQGEILGIAGLVGSGRTEMAQCIFGSYQGKYQGDIFLHKQPIKIKNCAQA
                     IENHIVMVPEDRKKHGIIPIMGVGKNITLSSLPQFCFGKKVINEPLEETIINQSIAKL
                     KVKTSSPELAIGRLSGGNQQKAILAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQ
                     LAKEGMAIIVISSELPEVLGISDRVLVMHQGKIKADLINQDLTQEKVMEAALKE"
     gene            complement(23361..24362)
                     /gene="xylF"
                     /locus_tag="PXF40_000718"
     CDS             complement(23361..24362)
                     /gene="xylF"
                     /locus_tag="PXF40_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005576719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5802089.1"
                     /translation="MKLKSKLLAIATATLMVLSNASVAKDLKIGMSIDDLRLERWQKD
                     RDIFVNKAESLGAKVFVQSANGDATAQISQIENMLNKDIDVLVIIPFNGEVLSNVIAE
                     AKKEGVKVLAYDRLINNADVDFYVSFDNEKVGELQAKSIIGQKPEGNYFLMGGSPVDN
                     NAKLFRKGQMKVLQPLIDSGKIKVVGDQWVDSWLAEKALQIMENALTANKNNIDAVVA
                     SNDATAGGAIQALSAQGLSSKVAISGQDADLAAIKRIIAGTQTMTVYKPITNLADKAA
                     EIAVALGKDEKVEMNAQLNNGMKEVPAYLLEPVVVTKENIDDTVIKDGFHTKDAVYK"
     gene            24604..25923
                     /gene="xylA"
                     /locus_tag="PXF40_000719"
     CDS             24604..25923
                     /gene="xylA"
                     /locus_tag="PXF40_000719"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HDL5802090.1"
                     /translation="MSNYFDKISKVQYEGANSTNPFAFKHYNPDEVVLGKTMAEHLRL
                     AVCYWHTFCWTGNDMFGVGSLDRSWQKTGDLLQGAKQKAEIAFEFFQKLGIPYYCFHD
                     VDVAPEGNNFKEYQHNFNTIVDILEQKQAETGVKLLWGTANCFTNPRYMSGASTNPNP
                     EVFAWAAAQVFTAMNATKRLGGENYVLWGGREGYETLLNTDLKREREQIGRFMQLVVE
                     HKHKIGFNGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLEKEIKVNIEANHATLAG
                     HTFQHEIATATALDIFGSIDANRGDPQLGWDTDQFPNSVEENTLVMYEILKAGGFTTG
                     GFNFDAKIRRQSTDPYDLFHAHIGAIDVLALSLKRAAKMLEDQALQKVVDNRYAGWNQ
                     DLGLQILNGKASLEDLAKIVETQGLDPKPVSGQQEYLENLVNSYIYR"
     gene            26076..27521
                     /gene="xylB"
                     /locus_tag="PXF40_000720"
     CDS             26076..27521
                     /gene="xylB"
                     /locus_tag="PXF40_000720"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HDL5802091.1"
                     /translation="MYIGIDLGTSGVKVVLLDENQHIIAITQKSLPIFRPHPLWSEQN
                     PQDWWNATNEAMLELSATQDLQAVKAIGLTGQMHGATLLDNADNVLSPAILWNDGRSF
                     MECEELEQLVPNSREITGNLMMPGFTAPKLRWVDKHQPDIAEKVSKVLLPKDYLRLLM
                     SGEYASDMSDASGTMWLDVGKRNWNKSLLNACGLDIENMPKLFEGNQITGYLRPTLAE
                     QWKMKSVPIVAGGGDNAAGAIGIGLYQTGQAMLSLGTSGVYFVVSDKFQANPQKAVHS
                     FCHALPDRWHLMSVILSAASAVDWAVKSLGLKDVSTLFQQVEASQTASDAIFLPYLSG
                     ERTPHNDPYAKGVFWGLSHNDNQITMAKAVIEGVSFALAEGIEVLHETGVVADNIALI
                     GGGAKSVYWRQLLADISGKTFEYRTSGDVGPALGAAKLAQIALNPNQDIATFCQPLPL
                     EQVYQPTPARYAEYQQKRQKFTELYRRLKGL"
     gene            complement(27584..27907)
                     /locus_tag="PXF40_000721"
     CDS             complement(27584..27907)
                     /locus_tag="PXF40_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QacE family quaternary ammonium compound efflux
                     SMR transporter"
                     /protein_id="HDL5802092.1"
                     /translation="MNVWILLAISICLEIAATNLLKLSNGFTKAIPTIGSLALYGLSF
                     YFLSIIFRTLPVGIVYAIWSGVGIVLTALVAYFAFGQKIDLAGLIGISLIIAGVLVIN
                     LFSKV"
     gene            28031..28573
                     /locus_tag="PXF40_000722"
     CDS             28031..28573
                     /locus_tag="PXF40_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase family protein"
                     /protein_id="HDL5802093.1"
                     /translation="MAQVYIVHGYTANADKHWFPWLEQELAKCGVSCERLNMPDSAKP
                     SLDGWLNHLAQNVELTDQTVFVGHSLGCIAILNFLAKNYAKIKGAVFVSGFYQPVENL
                     PELSAFTNYYAILPSVSSFPSYVVSALDDKVVNHQYSDALAQHLHADYIRLNQGGHFL
                     DREGVTELPVVLELVKKLLE"
     gene            complement(28744..29568)
                     /gene="dapF"
                     /locus_tag="PXF40_000723"
     CDS             complement(28744..29568)
                     /gene="dapF"
                     /locus_tag="PXF40_000723"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HDL5802094.1"
                     /translation="MQFSKMHGLGNDFMVVDGVTQNVYLTEEMIRTLSDRHRGIGFDQ
                     LLLVEPPYDPELDFHYRIFNADGSEVSQCGNGARCFARFVTLKGLTNKKDIHVSTAKG
                     KMVLSLQEDGKVRVNMGEPIWEPSQVPFTANKFEKNYILRTELQTVLCGVVSMGNPHC
                     VLQVDDVKTAPVNELGPLLESHERFPERANISFMQVVNRNHVKLRVYERGAGETQACG
                     SGACGTVAVGIMQGLLDNKVQVDLPGGTLIIEWQGVGHPLYMTGDATHIYDGFIKL"
     gene            29717..31039
                     /locus_tag="PXF40_000724"
     CDS             29717..31039
                     /locus_tag="PXF40_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5802095.1"
                     /translation="MSAMFIIQFAIVLLCILVGARVGGIGLGVFGGLGLAILSFGFGL
                     KPAGLPIDVMFMIMAVVSAAAAMQAAGGLDYMIKIATRILRKNPKYITFIAPLVTWTF
                     TVLAGTGHVAYSVLPVIAEVSRHNGIRPERPLSMAVIASQFAIVASPIAAAVVAVVAF
                     LEPQGVTLGNVLSVTIPATLLGLGLACVFVNKMGKELKDDPNYQRLLQDPEYVKENHI
                     TTNPTELPLKPTAKLSVGLFLFGALLVVLMGAIPALRPVFDGKPMGMAHTIEIVMLSI
                     GALIIFFCKPDGNEITKGSVFHAGMRAVIAIFGIAWLGDTLMQGHMDEVKSMVSGLVE
                     TAPWAFAFALFVLSVLVNSQGATVATLFPVAIAIGIPAPVLIGVFVAVNGYFFIPNYG
                     PIIASIDFDTTGTTRIGKYIFNHSFMLPGLLSMIFSIGFGLLLSNILL"
     gene            complement(31087..31446)
                     /locus_tag="PXF40_000725"
     CDS             complement(31087..31446)
                     /locus_tag="PXF40_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HDL5802096.1"
                     /translation="MISIGAVLGAMCRWQLAVWLNPILSQFAFGTLAANWLGCLLIGI
                     AMGFNLGESQRLLFISGFLGSFTTFSSFSLELTEKLLAEKWGQFVTVLSLHLIGGLLL
                     TLIGVMLARAVTSGRFC"
     gene            31659..31724
                     /locus_tag="PXF40_000726"
                     /pseudo
     CDS             31659..31724
                     /locus_tag="PXF40_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
     gene            31894..32082
                     /locus_tag="PXF40_000727"
     CDS             31894..32082
                     /locus_tag="PXF40_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802097.1"
                     /translation="MSYDANDALNEIEEALSELERVAEDLINNNPNKESELRGQGVHQ
                     ATKHLRFRIRNIRRGEAI"
     gene            32123..32425
                     /locus_tag="PXF40_000728"
     CDS             32123..32425
                     /locus_tag="PXF40_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802098.1"
                     /translation="MKIKLYFPDESIATIKRMGLRQMSPETLRWTADHPSSSYGMGAL
                     LRGKSGEILDGKSFAAMVHAFGAWIETDSEDTSRRVHNALVTAATGTEESVKVAKE"
     gene            32425..>33726
                     /locus_tag="PXF40_000729"
     CDS             32425..>33726
                     /locus_tag="PXF40_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISL3 family transposase"
                     /protein_id="HDL5802099.1"
                     /translation="MSNILNWPDYKVLQVSELEHDYQVHAEVSEPPTQCPHCNHPEIV
                     GFGRRDEVIMDTPVHGRRTGIMLNRRRYRCQSCRKTFLEPVPHKDEKRQMTNRLIQYI
                     ERESLRRTFSSVAEDVGVDEKTVRNIFNDYCERLEKTLNFEMPQWLGIDEIHIIKPRC
                     VITNIQQQTIVDMLDNRNKTTVTRYLSKRTDRDLVRYVAMDMWRPYRQAVETMIPDAT
                     VIIDKFHVVRMANESLERARKAIRSALTPQQRRGLMRDRFVLLKRRHELTDAEYMRFS
                     GWTLNYPEIGQAYELKEAFFEIWDCQTRHQAQEAYYSWLRQITPEMKAHYDPLIKAMG
                     NWHDDIFAYFDHPITNAYTESLNNLIRVVNRVGRGYSFEALRAKILFTEGFQKIKKPR
                     YQRQRIPEGAMGRMPFYGVAEAGPSTNYGADISTLVREIEAG"
BASE COUNT         9740 a         6895 c         7374 g         9717 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctta ttttttgtat gtagtttgac tgctgcaagc
       61 ggtgtgattt tgctattttt ttgcaaattt agcctgtatt ttatgagcaa caataaacag
      121 cactaagact ccgatgataa ttggatcgaa tgttacgctc tttaccgacc aataataatg
      181 taccatcgcc aatactaatg caggataagc ccactggtga atcgtccccc agcgtgttcc
      241 taattttcgt tttagcatag gcagcgaagt tattgccatt atgcttagaa tgaaaaaagc
      301 agctgctcct aaaatcaaat atgggcgacc ggcaagctcg ctaaaaaata attttacatc
      361 aaggcttaat tctaacaata gatagcttga aatatgtaga gctgcccata caaacgccca
      421 taagcccaat ggacggcgta aaatttgata ctggtttttc tttaggtatt gtagggcaat
      481 accaagtaga aacattatac aaaaaatgac gattgcacca taaccgagaa aatgctccag
      541 ctctttaatc ggatcggcac ctaatattgt ttcattaccc gtatataata gctgtgctac
      601 ccaaactagc ggtaataaac agccaagatg aatgagtata cgtaaccagg ttagcattag
      661 tagttcacct ttaaatctaa gccacggtat aaatttgcca cttcattttc gtagccatta
      721 aacattagtg ttggttggcg tttgacggat aataacccgc ctgcaccaat tactcgttca
      781 gatgcttgcg accaacgtgg atgatcaaca tttggattca cattagcata aaagccatat
      841 tcatttggag caagactttc ccaagtagtg agtgggcgtt tttcagcaaa ggtgattttc
      901 acaatcgact taatactttt aaagccatat ttccaaggca cgactaagcg aataggagca
      961 ccgttttgcg gtggcagggt tttaccgtat aaaccgacgg atagtagtgt taatgaattt
     1021 aaggcttcat ctaagcgtaa agcttctaca taaggataat caatcccacc gcctagcaag
     1081 cgattttttt gccccggcat ttgtgcagga tcatataaag tgtgaaagac cacatatttg
     1141 gctttactgg ttggttttgc catctcaatt aagcgagcta actcaaagcc gatccacggc
     1201 acaaccattg accacgcttc aacacagcga aaacggtaaa tgcgttcttc tagtggaaac
     1261 gtattaagca attgttgatg atttaagcta aacggatttt caacttctcc gccaatttcc
     1321 aatgtccaag gatcggtttt gaagtttgcc gcattttttg ctggtgcact tttatccacg
     1381 ccaaactcat agaaattgtt atagcctatt actttgtttt ccggagtgag ttcaagccct
     1441 ttatttggat ccggtttaaa ctgtagtgat tgcaagtgtc tttgtgtttc tgccatactt
     1501 actttaggca atgcagaagc tgcaatacct aaacctaacg cggtaataat tttacggcgt
     1561 tggtagaaaa tagtttcggg tgtaacatct tgaattgtta attttttcat cgaactatcc
     1621 tttttttatg aattgttgtt attattttgg actcagctga tctagaattc ttacaaaata
     1681 agtgtaattt tttattgggt attccctaaa ggagatatat gaagagtcta tcttctacac
     1741 agatagaaga gattagaaag caaatggtta aatttgccac cctacaacta gccgataaag
     1801 atttagctga ggatgttgta caggatgcct taaccaatgc ctataagcat tcagcctctt
     1861 ttcggcgaga agctgcactt aaaacttgga tttttgctat tttaaagaac aaaattttag
     1921 atttactcag aacacgaaaa cgacatattc cagtcagttc tctatgtgag gaagaagaat
     1981 caccaagtgc ctttttcgat cgccacgatc attggttgga acatcaagat gtaactgaat
     2041 ggaggggggt agctcaatca acttaccaaa aagaattttg ggcaattttt gatatttgtt
     2101 taaataaatt acccgcccag caagcacgag tatttatgat gcgtgaacat ttggagatga
     2161 gtagtgcgga aatttgccaa gaatgtgaaa tttctctctc taacttaaat gtattacttc
     2221 atcgtgctcg tttacgttta caagagtgtt tatctcgcaa ttggtttaga gaggaatcaa
     2281 aatgaaatgc aggcaagcaa cagaacttat ttcacagtct tgtgatgaga aacttcgttt
     2341 gcaacaacat atgcgtttgc agttgcatct tttggtatgc cctaaatgcc gaaattttaa
     2401 taaaaatacc aagaaattag gcaagatatt aagagcttac tgtaacgata aagatgctcc
     2461 gttctgattt attatacatt ttaaaaggag aaaaatatgc gttattggtt aataagttta
     2521 agcatactat taagtggctg tgtcgtgccg gttactccta cggggcaagc cggtatccct
     2581 atgccgatta taattggtgt ctcagatcca cttgattcca aagaggttca catttgtact
     2641 ctaaagccat ttactcagga atatcgtagt gaacatagta gccgaggcag agccaaatta
     2701 aatgtacaaa agcaatgccg tgcaaaccac agtgaaatgt tttgtgaaga aaaagatatt
     2761 gtttgcaaaa cctatgatta gttaaacaag cggtcgtatt ttatctgttt tttgcaaaat
     2821 tttcctaaaa tttgaccgct tgtttattta agcagataac atcaaaattt tatgaggatt
     2881 gtctatgcaa cccatcaata ttgccatcgc aggtgccggc ttttccagcc gagtttttca
     2941 tatcccgttt ttgaaacaag atgctcgttt taatattgta aaggtatatg aacgaacctc
     3001 taacaatgcg gcagaatggt tgccgaatgc agaaacagtg cgggatttca acgctctttt
     3061 aacgccagaa gtggatttag tgctgattac cacaccgaat caaacccatt atgcaatggt
     3121 aaaagagtca ttgcttgcag gcaaacacgt tttagttgaa aaaccgttag tggcaacagt
     3181 ggctgaggcg gaagagttgg cggaacttgc aaagcggcaa ggaaaggtgc tttatgtgta
     3241 ccaaaaccgc cgttgggaca gccatattgc gacggcaaaa tcgctaatgg agcaaaattt
     3301 actgggagag ttggtagatt gcgaaattcg ttttgaccgt tatgcgaaag agaaaaatgt
     3361 taaagtatgg aaagaatcag gcgagcttgg tacaggttta gtgtatgatt taggcgtaca
     3421 tttaattgac caagctttgt atcttttcgg gaagccggag gcggtgtatg ctgatgtgcg
     3481 ttatcagcac gaaggggcat tggttgatga taactttgat attcagctct attatgctaa
     3541 cggttttaaa gtggtgctga aagccagccg atatgctcgt gaaccaagcc cgacatttgt
     3601 attacacgga aaattaggct cttatctgaa acaaactccc gataatcaag aagatttgct
     3661 gaaaaatggc gtacaaccta ttggcaaaga ttggaatatc gaagaaaagg agaactgggg
     3721 aattttacac actgaagtgg aaggtaatgt ggttcgccag ccctatcgaa atgccgaagt
     3781 cagttatcaa aacttgtttg atgatttgta ccaagccatc gctcacaatg ctgagccaat
     3841 tatcaaactc gaagacgtca tttttgtgct aaaagtgatc gaaagcgtat ttgaaagtgc
     3901 aaaattaggg caaaaaatct atttgtaaaa ttttgaggat ttttgaccgc ttgttattct
     3961 ctctgatggc gcaagcgtcc acgcttgtgc ctattgatta ttttagcttt gtttctagta
     4021 caagcgtgga cgcttgcact atctaaaaaa tcatctcccc cattgctttt cccatctcga
     4081 ttggctaata tgcaacctca atccgtagtt agaatactta atatgttaag ttttaactgt
     4141 tttttcactc taataaggat catttcaatg aataaactta ttgcctcttt ggtggcttca
     4201 agctgtgcga cggcttttgc tgctcctgtt caacagaaca atttccacac cactacccac
     4261 acttacgaat ttacgcaatc ttatgattta gttgtgccac aaggctcgaa aggaacaact
     4321 aatttgtgga ttccgttgcc gtctgatacc gattatcaaa cggtaaaatc gatagagttt
     4381 gagggaagtt acaaaaacgc ctatatcaca gaaaataacg cttatggtgc aaaaaccttg
     4441 tttgccactt gggatactga tgcaccaaag cgtgatctaa aagtgaaaat ggtgatccaa
     4501 acccaagatc gtgagcctat ggctcaaggg gcgttggcaa attaccaaat gccggagaaa
     4561 atcacttatt ctgttgatgt attggagtat ttaaaaccaa cggctcacat taaaacagac
     4621 ggtattgtga aagaatatgc cgataaaatt gtgggtaacg agcaaaatcc gttgaaaaaa
     4681 gcggaactta tccacaagtg gattgttgat aatatggaac gtgataactc ggtgctaggc
     4741 tgtggcgatg gcgatgtgga gaaaattctc accaccaaag tgctaaaagg taaatgtacc
     4801 gacatcaact cggtgtttgt agcacttgct cgtgcctcta acattcctgc tcgtgaagtg
     4861 tttggtattc gtttagggca agcggtaaaa atggggcaat attccaaaac cgcatttggt
     4921 agctcaaaag atggcgtggc gaatgaaagc ggcgggcagc actgccgtgc agagttctat
     4981 ttagcaggct tcggctgggt gcctgtagat tctgccgatg tcgctaaaat gcgtttagcc
     5041 gagaaaaaag acgtggatga tgctgatgtt caagcggtct cgaaatactt attcggcaac
     5101 tgggaaatga actgggtagg cttcaatcac ggacgtgatt tcgatttata tccacaaccg
     5161 gaacttacac cactgaataa ctttggctac ccttatgctg aggtaggtgg tgacccgtta
     5221 aactcgtttg aggcgaaaga atttggctat gaattcatct ctaaagagtt ataaccataa
     5281 atttatcaca atgtgcgtga ccgccatagt gtcggcggtg acctccacat tctgttgtat
     5341 tgggccactg gtttatttag tgtttggcat ctcttcccct tggttgatgg agctaaacca
     5401 actggagttt ctacaactgc cgatgttgct gatttcgctc gctgcgtttg gctatggctt
     5461 ctggttgctg aatttttcca acaaaatcat ctgcaccaaa tacttctccc gcagaaccct
     5521 ggtcattttg tattgggtag tttctgtggt ggtgatgttc tttttaactt acccttatgt
     5581 attgccttac attttggaaa tgtggagcgg agaataaaat gaaaaaatat atcgcaacga
     5641 tgctgttggc ttttggtttg gttcattcaa gctacgcaca agaaaaaaca gctcaaattg
     5701 aaacgaaaca agcagagaaa accgtcgtcc tccatattcc ggaaatgtac tgccagctct
     5761 gcgtttattt agtcaataaa gaactacgag cagtagaagg tgtgatttcc accaaagcct
     5821 caatgaaaga gcgaaaagcg actgtggtgg taaaagaaag tgtggataac caagccctga
     5881 tacaagcggt cggaaacctc aaatatactg caaaagtcat tgaataaaac caaagctcaa
     5941 acattattgt ttgagctttt ttaatttagc cttccttttt tcccccatct aatattcaaa
     6001 cttcactttt gttttgattt aaaatgaaaa aataatttat tttgaaagtt gtttctcatt
     6061 ttgtgatcgc tgtcacagtt tttaaaataa aaataattta ctatttgcac atctcataac
     6121 agagatgaaa gaaaaatatt ttattttgaa aaacggagat cggtatgatt gaagcaatta
     6181 cacacggagc agaatggttt atcggcctgt tccaaaaagg cggtgaaacc ttagtcggta
     6241 tgataaacgg tattttgcca ctcttaattt cattattggt tgtaatgaat gccctgatta
     6301 aatttgtagg gcaagatcgg attgaacgac ttgctcaacg tagtgccgga aaccctattt
     6361 cacgttattt gatcttaccg gtgatcggca ctttcgtttt ctgtaacccg atgacattaa
     6421 gcttagggcg tttcttaccg gagcgttaca aaccaagcta ctacgccgca gcctcttata
     6481 gttgccactc tatgaacggc ttattccctc acatcaaccc gggtgaatta ttcgtttatt
     6541 taggtattgc cagcggttta accaccttag gcttaccact tgggccttta gccatcagtt
     6601 atttattagt cggtatgttt accaatttct tccgtggctg gataacagac ttcaccaccg
     6661 cattctttga aaaacgaatg gggatcacct tagatagaga agtacattta tcccactaac
     6721 caagtaactg aaatacagag gaatagatta tgagcaacaa agcgatttac attgaaaaag
     6781 gcaacggtgg ttggggtggt ccattaacat tacctgttgt ggaaggcaaa aaagtgcttt
     6841 atatgaccgg cggcactcgc cctgcgattg ttaataaatt ggtggaatta accggctggg
     6901 aagcggttga tggttttaaa gaaggcgaac cgccggcaga agaaatcggg attgcgatta
     6961 ttgattgcgg tggggtatta cgctgtgggc tttacccaaa acgccgtatt ccaaccatta
     7021 acattcactc caccggtaaa tccggccctt tagcagaatt tattgtggaa gatatttatg
     7081 tttcagcggt gaaagaaaac aatattcgct taattgatgc cgatggaagt gtgcctgtgg
     7141 caacagagca agcaaaacca acttcatcaa cgacagcaac ggcaaaagag tatgactcca
     7201 gcaaaaaaat caccgaacaa agtgatggtt tattagcaaa aatcggtatg ggaatgggat
     7261 cggtggcggc gttattcttc caagccggac gagacactat tgatacggtg cttaaaacca
     7321 ttttaccgtt tatggcattt gtttctgcgt taatcgggat catcattgcg tcaggtttag
     7381 gtgatgtgat tgcccacggc ttgacccctc tggcaaacag cccaatcggt ttagttacac
     7441 tggcgttgat ttgttccttc cctctccttt ccccattctt agggccggga gccgtgattg
     7501 cacaagttat cggcgtgtta gtcggtacgc aaatcggttt aggcaatatt ccgccacatt
     7561 tagcactgcc ggcactcttt gctattaatg ctcaagccgc ttgtgatttt attcctgtgg
     7621 gtctttcaat ggcggaagca aaacaagata ccgtacgggt gggtgtaccg tcagtattag
     7681 tcagccgttt tttaaccggt gcaccgaccg tgctgattgc gtgggcagtt tccgcattca
     7741 tctaccaata attaaccacg atacaagcgg tggaatttga aaaatttttt gcaaaatgca
     7801 ccgcttgtca aaacgagaga acatttatat gacgattatt tatcaaacga cctttaccaa
     7861 aatcgggaat tttgctcagg aatcattaac agacgatatg ttaatcactt ttaaacaagg
     7921 cgcaccggca gatttacaag attactgctt cattcataat ccatctgaat taagtagccc
     7981 tttagaagta ggcgatatcg ctgaatttga tggcgtagct tatccgatta cggcagttgg
     8041 tagcgttgca tctgaaaact tatccgccct cggacacatt accttccgtt ttgacggggc
     8101 aaatgatgcg gaatttccgg gaagcgttca cgttatcgga acaccgccgc aaggcttaac
     8161 agagaactca accttgatta tcaagcgtga ttaatgacgg attaaaaata atttcaaatt
     8221 gaaaatttag aggaatacat tatgaacaat gaaaaaaaag ttgctatcgt tgttggcggc
     8281 ggtcaaacac ttggagcttt tttatctgaa ggcttggcag atgccggtta tcgtgtggtg
     8341 gttgctgact taaacggcga aaatgcacaa aaagtggcag ccgacattaa tgccaaacaa
     8401 ggcgaaggaa atgcgattgg ggtgcaagtc gatgcggctg atgaaccaag cgttgaagca
     8461 ctagctaaag caacagatac cgtattcggg cgtgccgatg tattggttta cagtgcaggc
     8521 acagcgaaag catcgcctat ttgggatttc aacttaaacg attttgattt gtcggtaaaa
     8581 gtgaatttaa ccggttattt cttaaccgca aaacacttct cccgcttaat gattcgtgac
     8641 ggtattaaag ggcgtatcat tcaaattaat tctaaatcgg gtaaagtagg gagtaagtat
     8701 aattccggtt atagtgcagc gaaatttggt ggtgttggtt taacacaatc gttagcatta
     8761 gacttggcag ataaaggcat taccgtgcat tcattaatgt taggcaattt attgaaatcg
     8821 ccgatgttcc aatcgttaat tccgcaatat gcggcaaaac tcggcattcc ggaaagcgaa
     8881 gtagagcaag tttatattga taaagtgcct ttaaaacgtg gctgtgatta tcaagatgtg
     8941 ttgaatgtct taaaattcta tgccggcgaa gaggcagctt attgcacagg acagtctatt
     9001 aatattaccg gtggtcaggt aatgttctaa gcaaacaagc ggtcaaattt gtcgattttt
     9061 ttacaacaat ttgcaaaaaa tgactaaaat aaaccgcttg ttaattcgcc acaccggtta
     9121 atatgccaca ggggaaagcg tattgttttg aaatcgcagg tacgtttagg ctctgtggct
     9181 ttttattaag gagcaatgat ggattcaatt acacttctga ttatattggc aatgataatg
     9241 tggctgttac aagccgtttt gggttggctt caaattaaag cctttaacca agcctttatg
     9301 gaaatcagta agaaaggcaa agtaacggtt gggcgtaata gtggtcgttt taatcctaaa
     9361 tcggttattg tgttggcgtt tgatgatgag aaaaaagtgg tagatagcct ttgtatgaaa
     9421 ggattttccg tctttgccag accgcagaaa ttagcgtctg tgattggttt gtctcttgat
     9481 caaattgtgc cggaaaaaat ctttccaagc gataaacgtt cacaatttgc cttaaaagtg
     9541 gcgatatctt ccggatatag ttgctcagat caaaaataat gcgatttttt atttcatttt
     9601 gaatattttt ttagttaaaa atgagataat ggagaataaa tatgcagatc aatagtgtca
     9661 tctttgatat ggacggggta atgattgatt cagaacccca atgggcagag gctcaaattg
     9721 cagtattagc cgacttaggt attaatatca ccgagcaaga ttgcgaacaa ctcaccagag
     9781 gtaagcggat tgatgagttg agcgacactt ggattaaaaa atttcagtta tctgtttcca
     9841 accaagcatt aagtgaagcc attttggcac acggttgtgc tgcgattgaa caacacggca
     9901 aagcattaac gggtttatat gaattattgg atttcttaaa atctaatcag atcaagttag
     9961 ccgttgcaac ctcatcgccg ccggtggtga ttaaagcggt gtttgatcgc ttaaaactgt
    10021 gggattattt cccgattcga tgcagtgcaa tggacgaaga atatggcaag ccacaccctg
    10081 cggtctattt gagtgcagtg aaaaaattag gcattgaaaa acaagagtgt attgttattg
    10141 aggacagtgt aaccggctta attgccgcca aagccgctaa tttaactaca tttttggtga
    10201 ataccgatta tcaaaatgaa aaattttcaa ttgccgataa aagaatggca tcgctactag
    10261 atgtcattga aaaattaaaa cagcattagc acagattagc tcgctccaat ctttgctaaa
    10321 ttggaggaac aatgaaacct tttgaaagaa gacagcaaat tttagcctat ttagctcagc
    10381 acggtagaac cgaagtggac gtgctggcag actattttaa gctaactggt gcaaccattc
    10441 gtaaagattt aacttcactt gaagaagata agaaagtctt gcgtacttat ggcagtgtag
    10501 tcttaattga tgaagaaatt cttgaacggg aagagaaaat caataaagag gacaaagacg
    10561 ataaaccgct tgcacagaaa accggcatta atcttcaaca aaagcaagct atcgggcaaa
    10621 aagctgcaga gttaattaat gagggaaact ctattatttt tgatgcaggc agcacagtgt
    10681 tacaaatgat tccccattta aaagcatttg ataacctctc tttaatgaca aatagtttaa
    10741 ctattttcaa tgagattttg aaactcaata aatcctataa cttactgatt tccggtggta
    10801 catttcgtga gaaatcagct tcatttcacg gttattttgc tgaatccgct tttattggtt
    10861 caaattttga catactcttt attggcacag acggactaga tttagacgtt ggattaacga
    10921 ctttcaatga agtatataaa gtcagttcgc taatgtgtga tgcggcaaat aaaatcgtct
    10981 tacttgccga ctccagtaag tttggacgta aaagtccgaa tattgtgtgt gggttagaaa
    11041 aaattcatac tatcattacc gatgaaggat tatctcaaga aatgagagaa cagattaaag
    11101 cgaaagggat tgagctgtta gttgtataag ggcgtaaaaa tgaatcattt agacagtgca
    11161 aaagaaacgt taaacctcta tgctcagcag attatcacgc taaaccatcg actttctgaa
    11221 gaatttaatg aggtggtaaa tatgatactc gcttgtcaag ggcgagtggt tgttggcggt
    11281 attggaaaat cggggctggt tggcaaaaaa atggtggcaa cttttgcctc caccggtaca
    11341 ccgagctttt tcttgcaccc gacagaggct tttcacggcg atttgggaat gctgaaaccg
    11401 attgatatgg taattctgat ttctaacagt ggtgaaactg atgatgtgaa taaactgatt
    11461 ccaagcctga aaaatttcgg caataaaatt attgcgatga caggtaatcc ttactccaca
    11521 cttgggcgaa atgccgatgt gattttaaat attggtgtag agcgtgaagc ctgcctgaat
    11581 aatctagctc caaccagctc tactttggta acgatggctt taggcgatgc gttagccatt
    11641 gcgctaatga aagcccgtga tttccgccct gaagattttg cccgctacca cccgggtggc
    11701 agtcttggtc gtaaattatt gaacagagtg cgagatgtga tggtgcgtaa agtgccaacc
    11761 gccagcttag acaccacctt taccgaatgt ttatctgtga tgaacgaagg gcgtatgggg
    11821 gtggcggtaa ttatgcaaga cgataaattg gaaggcatta ttaccgatgg tgatatccgc
    11881 cgcacattag cgaaattcgg ggcggagagc ctaaataaaa ccgctgacga aattatgacc
    11941 cgtaatccaa aaaccattaa cgataccgaa tttttagcca aagccgaaga tttaatgaaa
    12001 gagctgaaaa ttcactcatt aattgcagtg aatgatgagg gtaaagtaac gggattgatg
    12061 gagttctcta gttaatttat agatgtaacg atggcgcaag cgtttacgct tgtgccgttc
    12121 actgacatat atcaatatct aataaaacag gtaagttgtt agcataattt cttgcactgc
    12181 tatatttcca ttcaaatgcc tcgcatacaa aaccgcttac gatagggttg ttgtgaatat
    12241 ggtttagctt ttcatcaaaa aatttctgag aatagattgt tatcggttgg ttatgatgtt
    12301 gccaaagttg gtattgcttg acattatttc gttgtttagc tgcccgagta aacatccata
    12361 ataaccattc ttttctactt tcttggggat ttgttttaat ttgctgaatc aacatttaga
    12421 tgtaaatgtt ttaaaatctc ttattaaatc tgacgggttt tggtcttttg cttgaaataa
    12481 taaatgaata tggcttggca taatgcagta gccatataaa atcatccctt tttgttttcg
    12541 acaataattc aatgattgga taatggtttg aaaataatct tctcgaataa atagatcaat
    12601 ccaataaact gttgcaaaac taacaaaata ggctccgctc ttctcataaa acttatattt
    12661 tctactcatt atgaacctct aaagtgcagt ttatgctgat agtaatatag gtgaacagtt
    12721 agggttagca attcatttta ttttttcgat gtagatcgca aaaatagaat tatgcttggc
    12781 acaagcgagg acgcttacgc catctttact ccaaaaatgt gagatagatc acattttcaa
    12841 atctgcccaa aaaaatttaa tgtgatctac ttcacatttc tgagagaaac atttttgtaa
    12901 cttttgaaag tggtgctaat ttaagcacga ttttttcaac cctaattttc tctccttttt
    12961 tgaggtttct atgtctaatt taaaagtgaa agtccaaggt tttgggcgtt tcttatcgaa
    13021 tatggtgatg ccgaatatcg gtgcctttat tgcgtggggc tttatcaccg ccctgtttat
    13081 tccaaccggt tggttgccga acgagacttt tgctaaactg gtcggtccga tgattactta
    13141 cttgctgcca ctgttaatcg gttacagcgg tggtaaatta gtcggtggtg agcgtggtgc
    13201 ggttgtaggt gcgattacta caatgggtat tatcgtgggt tctgaaatcc cgatgttctt
    13261 aggtgcgatg attgtaggtc cattaggcgg ctgggcgatc aaaaccttcg ataaagcgat
    13321 tgacggcaaa gtaaaaagcg gttttgagat gttggtaaac aacttctcgg tcgggatcat
    13381 cggtatgatt ttggcaatgc tttcatttgc tttcattgga ggtatcgtca cccaaatctc
    13441 tgcggcatta ggtgcaggtg tgggggcgtt ggttgaagct ggtcttctgc cagtaacctc
    13501 tatcatcgtt gaaccggcga aaatcctatt cttaaacaat gcgatcaatc acggtgtgtt
    13561 cacgccattg ggtacagcac aagcacaaga agtgggcaaa tctattctgt tcttgattga
    13621 agcgaacccg ggtccgggct ttggtatctt gcttgcctat atgttctttg gtcgtggcac
    13681 agcaaaacaa accgctggta gtgcgtcaat cattcacttc ttaggcggta ttcacgaaat
    13741 ttatttcccg tatgtgttaa tgagcccacg cttaattctt gcagtgattg caggcggtgc
    13801 aaccggcgtt ttaaccaact cattattagg tggcggttta atcgcaccgg cttccccggg
    13861 ttctattttt gcgattttag caatgaccgc accgggtgct cactttgcag ttgttgcctc
    13921 cgtgattctt tcttgtgccg tgacttttgc gattgcgtca atcttactca aaacccaaaa
    13981 aggtgaagcc tcattggaag atgcacaagc acaaactcaa gcgatgaaag cagaaagcaa
    14041 aggcgtagta aatggtaaca tcaacaaaat ctatgtagcg tgtgatgccg gtatgggttc
    14101 aagtgcgatg ggtgcgagta tgttacgcaa aaaagtgcaa gcggcaggtt taaacattga
    14161 agtacaaaac ttagcgatca acgacttacc gcaagacgca caactggtga ttacccacaa
    14221 agacttaacc gctcgtgcaa cacaacgtgt ggcaacggct caacacttat cgctcactaa
    14281 cttcttagac agtgcgttct atgacagctt agtggcaaaa ctggctaacc accagccaca
    14341 acaagcggtg caaaatacac aaaattttgc aaacccggtg gaagaacctc aagccgaagg
    14401 gttaaaattg caagcagccc aagtcttttt aggcttacaa gctaacagta aagaagaagc
    14461 gatccgcttt gccggtgagc agttagttaa agcgggcttt gttcaaccaa gctatgtaga
    14521 tgcaatgttc gcccgtgagc aaatggtttc aacttactta ggcgaaggct tagctgtgcc
    14581 acacggtaca tctgatgcca aagacagcgt actgaaaacc ggtatcgtgg tctgccaata
    14641 cccgaacggc gttcgcttca ccgatgaaga agacggcgtg gcgaaactgg tggtcggtat
    14701 tgcagcaaaa ggcaacgacc atatccaaat tttaagtgca attaccaacg cactggacga
    14761 tgaacaagca atgaaaacac tgacctcaac aaatgacgtg gaaaaagtgt tagcattatt
    14821 atctaaataa tcaccctgtt gtgtaggggc gggtcctgtg cccgcccatt atcctacaaa
    14881 atttagggcg ggcacaggac ccgcccctac gttttataga ggaacaatca tcaatgaacg
    14941 cactccattt tggtgccggt aatatcgggc gtggctttat cggcaaattg cttgctgatg
    15001 ctcgcatttt cgtgactttt gccgatatta accaaactca aatcgaccaa atcaaccaaa
    15061 acaagcaata cggcgtgaaa atcgtgggcg atgacagccg tgtggaaatt gtcaaaaaca
    15121 ttgcggcaat taactcgaaa gacgaaaatg ccgtgattga gcaagtgaaa aacaccgatt
    15181 taattaccac cgcagtcggc ccgaatgtgc ttggctttat tgccccactg ttcgccaaag
    15241 cgttagtggc tcgtgtggaa agtggcaaca cccaaccgct gaacattatc gcctgtgaaa
    15301 atatggtgcg tggcacaact ttctttaaag gtaaaatttt tgagcattta actgccgagc
    15361 agcaagcaga aattgaaaaa gtggttggtt ttgttgatag tgcggtggac agaattgtac
    15421 cacctgccga gccgaaccct gctgatccgt tggaagtcac ggtggaagag ttcagcgagt
    15481 ggattgtgga tcaaacccag ttcaaaggtg acattccaaa catcaaagga atggaattaa
    15541 ccgataacct gatggcgttt gtggaacgca aactgttcac cctgaacacc gggcatttaa
    15601 tctgtgccta cttgggcaaa caagcgggcg tgaaatggat taaagaggcg attgcgattg
    15661 aggaaatcaa aactcaggtg aaagccacaa tggaagagag cggtgctgtg ctgattaaac
    15721 gttacggctt cgacccacaa gcccattcag cgtatatcga aaaaatcctc aaacgttttg
    15781 ccaacccgta cttaaacgat gacgtaaacc gtgtagggcg tgagccaatc cgcaaactga
    15841 gcgaaaacga ccgcttgatc aaaccgttgc gtggcacgtt ggaatatggc ttaccgtatc
    15901 aaaacttggt caaaggcgtg gtgatggcat tgcaatatcg caatgaggaa gacccacaag
    15961 cggtcgaact tgccgaattt attgcaaatc acggtgtggc ggcagcggtg gaaaaataca
    16021 ccggtttaac cgaccaagcg gtcattgctc aagtggtgga attatatcaa taattcttga
    16081 cactatgatg gattacatcg acaaactcag tgaggaaacc accctgcgtg gtttccttag
    16141 cattgccaat caacgctttg ccaaagcggt tgaacagttg attgaacgag tgtttcgcaa
    16201 aacggacttt gcgttaaaat ccgtggtgga ttccttgttt gaacatcaag gaccgctggc
    16261 tgacattgaa gtacgtttaa aagtgttgct tgggttgggg gtgatctcac ctaaagtgtt
    16321 tgaagatatc tcgcttttcc ttgaagtcaa acagcatttg aatgaggaag aagacgagtt
    16381 cgcattttct cacccggcgg tagtgaaatt tgccaaagat ttgcaccata ttgatttttt
    16441 gcctatcaat gaattgctga atatgaaagc gagtgcagcg aataaagatt cgatgctctt
    16501 tcaaatgcag caaatgcggt tggaaaaaat ggtacgttca agcctgattt tggcggtaac
    16561 tgaaattgac gaacaactga atgtggaaag cccattgtaa aaatttcgtc aaaactaacc
    16621 gcttgtactg agcattcacg ccgtacgtga ttgctttttc ctttcttttt gatcttatcg
    16681 gcttttttct ttgcttaaag cggtgtaatc tatccctaac tattttggag gatatggtta
    16741 tgcaatcgtt gctctctttt gtgccggatt ttcttaagca agaactgttt tgggtaatgg
    16801 cgttattggt atttgcgatt tggcaattta tccaaaacaa gttgcgtatg gacgtggttg
    16861 ccttaattgt aatgctgttt tttagcctga ctaatatttt atcagtcaaa gaagtgttgg
    16921 caggcttaag tgacccaaac gtggtgctga ttgcgttgct ctttattgtc ggagaaggtt
    16981 tggtgcgaac cggcgtggcg aaccaagtca gcgattggtt gatgcgggtg tcgggagcga
    17041 gcgaaaccaa agtgctggtg ctgctaatgc tctgtattgc cgggcttgga tcttttatga
    17101 gttccaccgg cattgtggcg attttcattc cggtggtgct tgccatttgc tcgggaatgg
    17161 gaatttctcc tcgccggtta atgatgccgt taagtgttgc cggacttatc agcggtatga
    17221 tgaccttaat tgccacacca cccaaccttg ttgctcattc cgaattagta aaatcaggtt
    17281 ttgaaggctt caatttcttc agttttactc cgattggatt aattatttta gtgatgggca
    17341 tcggctatat gctgattgcc cgccgttggt tggataatgg tgagcaaagc aatactcaca
    17401 gtcaggctca aaaattttca atgtcgcagt taattgaaga gtatcaactt aaagagcgag
    17461 ccaaaatggt gctggtggaa gcagattcag actgtgtcgg caaatctatc gggcaactga
    17521 atttacggat tgagcaaggg ctaaacatca ttgcaattca acgcactaag cggtttagaa
    17581 aaattaccgt cagtgcctcg gtaaacgaaa ttttccagcc gaaagatatt ttactgcttg
    17641 atactgccct cgatgatgaa acttaccaac aacgctgtga acagctcaaa cttcgcccga
    17701 ttgagctaaa aggcgaatac ttttcctcac aatatcgctc ggtgggtatg gcggaaattt
    17761 cggttatgcc tgaagcagaa tgtatcggta aaactattcg ggaactcaaa ttccgctcaa
    17821 gataccattt aagcattgtc ggcttaaaac gtggtgatga aatcatacaa gaggaactgc
    17881 tcgatacgcc actcaaattc ggcgatattt tattggtgat gggcgtatgg caacaaattc
    17941 accgtatgga cgacgatcat cgagatttct tcttgcttag agatccggca gaaagtaaaa
    18001 acgcccctcc ggcgttaagc caagcccctc acgctctgtt ctcagtgctg actatggtgt
    18061 tgctgatgat taccggcatt gtgccaaacg tgatggcagc gttgattgcc tgcttaatgt
    18121 taggcaagtt ccgctgtgtg gatatgaaaa gtgcttatga ttcgattcat atgccaagca
    18181 ttgtgttgat tgtggggatg atgccgtttt ctattgcctt acaaaaaacc ggtggtgtgg
    18241 atttaaccgt taggcttcta cttgatgcaa tgcaaggctt agatgtacat tttgttctaa
    18301 tagtattatt tgtagtaaca gcgattatca gtgcttttat ttccaacaca gcgactgcaa
    18361 ttttggttat gccgatagcc attgcgattg ctaaccaact tggctactca ccggcacctt
    18421 ttgtgatgac ggtcgctgtt tcagcctccg ccgcttttat gacgccggtt tcttcaccgg
    18481 taaatacgat ggtattagca ccggcaggct ataaatttat tgatttcgtt aaagttggtg
    18541 tgccgtttac tgtactggtg atgctggtgt cggtgtttgt gattccgatg ttatttccgc
    18601 tctaaacact cctctaaatt acaagcggtc atttttggta atctgacgtt gacggtaaaa
    18661 ttgttgagta tgtctggcaa catagtgtgg ggtactgatc ttttttgcat agagagaaag
    18721 aaaaaaattt gggcggaaaa ataacggcga ggctaggaaa tacaaggctt cgccgttttt
    18781 gtttggggtg agttatgcaa aaaacgaaaa tgagcaaaaa tagaaaaaaa tgggctattt
    18841 ttacgttatt ttttgcatag gtctgagcag gtttaaacgg attttaaaac aattttaagc
    18901 gccctcatct cggctggctc ggttgcgttg ctctaagctg tgaatgaggt cgtgtacacg
    18961 ttgtttatcg gcacaggtta ggttggtgtt attatccacc gtgcagccgg caatcaccgt
    19021 ggcgttatcg ccgttttgaa tgatgacgtt gctgttatta aacacctgta taggctcttg
    19081 gcttggctgg ctgttgccgg cagtgctatt gtctctgaat aatttgagaa tggcttgttt
    19141 gtccatattg tcccctgtta tgccaccagt ttgagtaatc ccaccatttt ttctttttcg
    19201 cttttttctt gcgtgagaag ctcgtagaaa gcccacacca tttgggcttt tccggcaggc
    19261 ttcatttccc gttgggtaat ttccagcacc tcttccaacg tttctattgc ctcttgtaac
    19321 ttagctttga taacaactac ttccccttct tctgtctgcg gttttgtggc atacacaggc
    19381 tgtggctctc ttgtgacatt aaggctttgc gagtgtcgct cacctgttaa taggtagcaa
    19441 ggctcaacgt taagtatttg tgacaaagcc ataagttttg atataggagg ttctcttgta
    19501 tcagcctccc acgcttgtaa tgtagatatt gcaatacctc ctagggcatc acaaacctca
    19561 gatctactta attttgcatt ttttctgctc tgttctattc ggttaccgaa accaataacc
    19621 tttttacact ctattttcat aactgtaaaa aaataagttg agatttttag ccttttacac
    19681 tctaaaaacc tataaataaa tcaataactt acagcaaact aagtttattt gctcataaat
    19741 caactataaa gcaacctttt tacactttat ttttagtaaa aataggtata ttatctaaat
    19801 cgttaagcga aaggagttat ctaatgagta cattggaaga tattaaaaaa acagcgaaag
    19861 actggcatag ggccgacatc atcgctgctt tacataaagc gggttggtcg cttagacaac
    19921 tctcattgaa gcatggctac agtcaatcca gcaccttgaa aaacgctgta gatcgtccgt
    19981 ggttaaaggg tgagcgtatt attgccgaag caatcggtat atcacccgaa gaaatttggc
    20041 ctgaacgtta tgctcaacga aaccataaaa aatttgccga cagatagctt aaagaggttt
    20101 ttatgagtga aaacagtcta aaaacacact attcggcaaa agaattggct gagttaagtt
    20161 tagcctgttt acctaaaaca aagcaaggag ttttgtatca ggcaaagaaa caaggatgga
    20221 ctactcataa aaaggttgga gttgggggag aaattttaga atttgcactc tcaaacctcc
    20281 ctcaagaaat ccaaaccgaa atccgctccc gctttatgtc ggcggtggtg gaagccaagc
    20341 cgaaaaagtt accggcagtg cgtgcggagg tggatgtggg aaacctgacc accaaacagc
    20401 gagaaattgc tgatgcacga atggcactgg tggcgtatgt gttggaactg gaaggctcaa
    20461 tgagccggat taaagcgata acctaccttt gcaaccttgc caaacaaggc gaaatgccac
    20521 cgcacttggt ggagctggtt gccgtagcaa atgctaaaaa gacggcaaaa cgcacaatag
    20581 ttcccatttt tagcccgatt atgccggatt tcccgttgga tagtcgagat tgaccgcttg
    20641 ttatccaatt aggctttttt cttgctgatg gtatctaccc aaactgcaag cagtagaatt
    20701 ccacctttaa cgatatattg ccagaaggtt ggcacatcaa gcatactcat accgttatcc
    20761 agcaaagcaa taataaatgc tccaataact acgccataaa tgctaccgat accgccggct
    20821 aaactggctc caccaatcac gcaggcggca atcgcatcta attcggcatt ttgcccggcg
    20881 gaaggtgcgc cggctccaag acgtgagctt aaaatcaagc ctgcaatggc aactaataag
    20941 ccgtttaagg caaaaatcgc aagtttgact ttttcaactg aaatccccga gaggcgagcg
    21001 gcatcaatgt tgccaccaat cgcataaatg tgacgcccga aggcggtttt tctggccaag
    21061 aatgtgccgg caatggctag aatcaccaac accaataccg ggaatggcac accacggtaa
    21121 tcattgagta ggtagatcgc acctaatacg ataattgcaa ctagtccgta tttcagcgtg
    21181 tctttcgaca tagaaggcac agtaagattg agtttttgtc tggctttgcg ttggtagcta
    21241 ccccaaacaa taaagcaaaa tatcccgata gtacctaaaa tcatacccac catatcaggc
    21301 aaatagcctt gaccaatggt tgtcatttca ttgctaatcg gtgaaacggt tgtcccgttg
    21361 gttaagccga ccaatacacc acgaaacgcc agcataccgg caagagttac aataaaggac
    21421 ggcacttttt gataagcaac ccaccaaccg ctccaagcac ccagcatgac gcctaaaatt
    21481 aaagtaacta taatagttaa cgagagcggc cagccccacc atacattact gatggcggca
    21541 aatccaccga gtaagcccat tagcgagcca accgataaat caatttctgc ggaaataatc
    21601 acaaatacca taccgatggc aagaataccg gtaatggagg tttggcgtaa caggttggag
    21661 atatttctgg cacttaaata agcaccgtca gttgcaatag agaaaaagct cataatcaca
    21721 acaattgcaa tcagcataat ataaacttgt aaattaatcg attttaactt attcataggt
    21781 tactccttga gtgccgcttc cattactttt tcttgggtaa ggtcttggtt aatcaaatct
    21841 gctttaattt tgccttggtg cataaccaat acacgatcac taatgcctaa aacttcaggt
    21901 aattcggagg aaatgacgat aattgccata ccttctttag ctaattggtt gatgagctta
    21961 taaatttcat attttgctcc cacgtcgata ccacgggtcg gctcatctaa aatcaggatt
    22021 ttagggttaa gcaataggca ttttgccaaa attgcttttt gctgattacc gccacttaac
    22081 cgtccaattg ctaattcagg cgaggaagtt ttcactttca gttttgcaat agattggttg
    22141 ataatggttt cttccagcgg ttcatttatt acttttttgc caaaacaaaa ttgcggtaat
    22201 gaagagagag ttatgttttt acccaccccc ataattggaa tgatgccgtg ttttttgcga
    22261 tcttccggca ccatcacaat atggttttca atcgcttgtg cacaattttt gattttaatc
    22321 ggttgcttat gcagaaaaat atcaccttga tatttgcctt ggtaagagcc aaaaatacat
    22381 tgtgccatct cggttcgccc tgaaccgacc aaaccagcaa tacctaaaat ttcaccttgg
    22441 cgtagtacaa aattagcatt atcaacccgt ttgatatgtg tattggttgg gtgccaagcg
    22501 gttaaatttt caactcgaag gacttcttca ccaatattgt gtggctcgtg tgggtagagc
    22561 gaggtaatct cacgtccaac catcatcgta ataatatcgt cttcactcat tccctctgca
    22621 ctgcgagtac cgatatgttc gccgtctcga atgacacaga ttttgtcgga aatggctttc
    22681 acttcattca atttgtgtga aatataaaca caagcaatat tgtgagcttg taaatcttta
    22741 attaaactca gcagaatctc ggtttctttt tcggttaacg aggcggtagg ctcgtctaaa
    22801 atcaacaacc gtacctgttt attcaatgct ttggcaattt caaccaactg ttgttgccct
    22861 aaacctagct ctccaacttt ggtgtttggg tcaatatcca actgcacttg ttcaagtaag
    22921 gttttacaac gcagatacat ttcattgtca tctgtaatcc ctgatttggt aatttcattc
    22981 cctaaaaaca tattctccaa aatcgacata ttttttacta aggtcaattc ttggtgaata
    23041 atcgaaatgc ctttttcttc agtatctttg atatttctgg caatcaattt ttcgccggaa
    23101 aaatagattt ccccttcata atcaccggca ggataaattc cacataatac tttcatcaga
    23161 gttgatttgc ctgaaccatt ttcaccacat aaagaaagta tttcgccggt ttcaagggaa
    23221 attgaaatat tatttaatgc cacaacctca ccgaattttt tagtgatgtt cttcatttct
    23281 aataatttcg ccatacttag ttagcccctt attttcaaaa atggcgagga agcctcgcca
    23341 tctagaaaaa ttaaagtgat ttatttatat actgcatctt tggtatggaa gccgtcttta
    23401 attactgtgt catcaatatt ttctttagtt acaacaaccg gctctaataa atatgccggt
    23461 acttctttca taccgttatt taattgagca ttcatttcta ctttctcatc tttacctaat
    23521 gcaacagcaa tttcggcagc tttgtcggct aaattggtaa ttggtttata cactgtcatc
    23581 gtttgcgtac cggcaataat acgtttaatt gcggctaaat ctgcatcttg tccggaaatt
    23641 gcaaccttgc tggataaccc ttgggcactt aacgcttgaa ttgcaccgcc tgcggttgca
    23701 tcgtttgaag ctacaactgc atcaatatta tttttattag cagttagtgc attttccata
    23761 atctgtaatg ctttttcagc aagccaagaa tctacccatt gatcgcctac cactttaatt
    23821 tttccactgt caattaacgg ttgtagcacc ttcatttgac ctttacggaa cagcttcgcg
    23881 ttattatcta caggtgaacc acccattagg aaataattcc cctccggctt ttgcccaata
    23941 atgcttttag cctgcaattc acctactttt tcattatcaa atgaaacata aaaatccaca
    24001 tcggcattat tgattaagcg gtcgtaagca agtaccttaa caccttcttt cttcgcctcg
    24061 gcaatcacat tggataacac ttcgccgtta aacggaataa tcaccaatac atcaatatct
    24121 ttattcaaca tattctcaat ttgtgagatt tgtgcggttg catcgccatt tgccgattga
    24181 acgaagactt ttgctcctaa gctttccgct ttattcacaa aaatatctcg gtctttttgc
    24241 caacgctcta agcgtaaatc atcaattgac ataccgattt ttagatcttt agcaacagaa
    24301 gcattgctga gtaccattaa agtcgccgta gcaatggcta ataatttaga cttaagtttc
    24361 atagttcacc tcattggtta tgaaaatgtg agcatctttt tcgcccgtaa gcagtctggg
    24421 cttatttcaa atgaagttca attatcatat ttattaatat cattatgatt tttcactttt
    24481 gtgatctacg ccacattaac caataatcga aatccaaaaa cgaaatatcg taattgaagg
    24541 ttttgcataa ttttccgatg atgttaccga aagattattt ttccaattca taggagcatt
    24601 attatgtcta actatttcga caaaatctca aaagtacaat atgaaggggc taattccacc
    24661 aacccgtttg cattcaaaca ttacaacccg gatgaagtgg ttttaggcaa aacgatggca
    24721 gaacatctgc ggttagcggt ttgctattgg cacaccttct gctggacggg taacgatatg
    24781 tttggcgtgg gttcgcttga cagaagctgg caaaaaacgg gggatttact gcaaggtgcg
    24841 aagcaaaaag cggaaattgc ctttgaattt ttccaaaaat taggcattcc ttactactgc
    24901 ttccacgatg tggatgttgc accggaaggc aacaatttca aagaatatca gcacaatttc
    24961 aacactattg tggatatttt agagcaaaaa caagctgaaa caggcgtgaa attattatgg
    25021 ggtacggcga actgctttac caatcctcgc tatatgtcgg gtgcttcaac caatccgaat
    25081 ccggaagtct ttgcttgggc ggcagcacaa gtctttaccg caatgaacgc aaccaaacgc
    25141 ttaggcggcg aaaattatgt attatggggc ggacgtgaag gttatgaaac cctactcaac
    25201 actgacttaa aacgtgagcg tgaacaaatc ggtcgcttta tgcagttagt ggtggaacat
    25261 aaacacaaaa tcggttttaa cggcacttta ttaattgagc caaaaccaca agaaccaacc
    25321 aaacatcaat atgactacga tgttgccacc gtttacggtt tcttaaaaca gtttggtcta
    25381 gaaaaagaga tcaaagtcaa cattgaagca aaccacgcca ctcttgcagg gcatactttc
    25441 caacacgaaa ttgcgactgc caccgcatta gatatttttg gctcgattga tgccaaccga
    25501 ggtgatccgc aattaggttg ggataccgac caattcccaa acagcgtgga agaaaacacc
    25561 cttgtgatgt atgaaatctt aaaagcaggt ggtttcacaa cgggcggttt caactttgat
    25621 gcgaaaatcc gccgccaaag taccgatccg tatgatttat tccacgcaca tatcggggca
    25681 attgatgtgt tagccctttc gctaaaacgt gcggcaaaaa tgctggaaga tcaagcatta
    25741 cagaaagtag tagataaccg ctacgctggc tggaaccaag atttgggctt acaaattcta
    25801 aacggtaaag caagccttga agatttggca aaaatagtgg aaacccaagg gttagatcca
    25861 aaacctgttt ccggtcagca agaatatttg gaaaatttgg taaatagcta tatttaccgt
    25921 taatctacaa gcggttgttt tttatcaatt ttttgcaaag ttaagctcga tctgatcccc
    25981 ctctttgcta aagaggggtg atagatctcc aaaacttaaa attgcaaatg ttccgaataa
    26041 aatgaccgct tgtattcaat aacaaaggaa tatttatgta cattggaatc gatctcggca
    26101 catcgggtgt gaaagtcgtg ttactcgatg aaaatcaaca cattattgcc atcacacaaa
    26161 aatcacttcc tatttttcgt ccacacccat tgtggtctga acaaaatccg caagattggt
    26221 ggaatgccac caatgaagcg atgttagaac tttccgctac tcaagattta caagcagtaa
    26281 aagcgattgg tttaaccggg caaatgcacg gagcgacttt actagataac gcagataatg
    26341 tactttcccc tgcgatttta tggaatgacg gacgtagttt tatggaatgc gaagagttag
    26401 aacagcttgt gccaaatagc cgtgaaatta caggcaacct gatgatgccg ggctttaccg
    26461 ctccgaaatt gcgttgggtt gataaacacc agcccgatat tgccgaaaaa gtcagcaaag
    26521 tcttgctacc gaaagattat ctccgcttgt tgatgagcgg cgaatatgcc tctgatatgt
    26581 ctgatgcctc cggcacaatg tggcttgatg tgggtaaacg gaattggaac aaatcgctac
    26641 taaatgcttg cggattagac attgaaaata tgccgaaact gtttgaaggc aatcaaatca
    26701 caggttattt acgtccaacc cttgccgagc aatggaaaat gaaatctgtg ccgattgtgg
    26761 caggcggtgg cgataatgct gccggtgcaa tcggcattgg cttataccaa accgggcaag
    26821 ctatgctctc attggggact tcaggggttt attttgtagt gagcgataaa tttcaggcta
    26881 atccgcaaaa agcagtgcat agtttttgcc acgctttacc tgatcgttgg catctgatgt
    26941 cagtaatatt aagtgccgct tctgcggtag attgggcagt aaaatcattg ggactaaaag
    27001 atgtatcgac tttattccaa caggttgaag caagccaaac ggcatctgat gctattttct
    27061 taccttattt atcgggtgaa cgtacaccgc ataatgaccc ttatgcgaaa ggcgtatttt
    27121 ggggattaag ccataatgac aaccaaataa cgatggcaaa agccgtgatt gaaggggtaa
    27181 gtttcgcttt ggctgaaggg attgaggtac tccacgaaac tggtgtagtt gctgacaata
    27241 ttgcattaat tggcggtgga gcaaaaagtg tgtactggcg acaactactt gccgatatta
    27301 gcggtaaaac ctttgaatac cgcaccagtg gtgatgtcgg tccggcatta ggggcggcaa
    27361 aactcgctca aattgcgcta aacccaaatc aggatattgc tacgttctgt cagccgttac
    27421 ccctggaaca ggtttaccaa ccaacccctg cccgctatgc agaatatcaa caaaaacgcc
    27481 aaaaatttac tgagctttac cggcggttaa aggggttata attcttgcca actattacaa
    27541 gcggttgatt ttgcagattt ttttgtaaaa tcaaccgctt gtatcacact ttagaaaaca
    27601 aattaatcac caatacaccg gcaataatga ggctgatgcc gattaagcct gccaagtcaa
    27661 ttttctgtcc gaaagcaaaa taagcaacaa gggcggtaag gacaatccct acgccggacc
    27721 aaatagcata cacgattccg accggtaggg tgcggaaaat aatagagaga aagtaaaagg
    27781 ataaaccgta taaggcgagc gagccaatag tcggtatagc tttggtgaag ccgttgctta
    27841 atttgagtaa attggtggca gcgatttcga ggcagatgga aatcgcaagt aaaatccaaa
    27901 cgttcattga tgacctcttt gcgtaaatgc gtgctatttt acctgagttg caaaaaaatt
    27961 taaaaaaatc accgcttgtt ttttcctgat taagctatgg tacaatcttt ggtgaatcag
    28021 gaggtgtgaa atggcacagg tttatatcgt acacggttat acggcgaatg ccgataagca
    28081 ttggtttcct tggctggagc aagaattagc gaagtgtggt gtcagttgtg agcggttgaa
    28141 tatgccggat tcggcaaagc cgtcattaga tggttggtta aatcatcttg cacaaaatgt
    28201 ggagctgacc gatcaaacgg tttttgtcgg gcatagttta ggttgcattg ccattttgaa
    28261 ttttttagcc aaaaattacg ccaagattaa aggggcggtg tttgtgtcgg ggttctatca
    28321 accggtagaa aacttacccg aactgtctgc ctttaccaac tattatgcga ttttgccgag
    28381 cgtatcgagc tttccaagct atgtggtaag tgcgttagat gataaggtcg tgaatcacca
    28441 atacagtgat gcgttagccc aacatttgca cgcggattat attcggttaa atcaaggcgg
    28501 gcattttttg gatagagaag gtgttaccga attacctgtg gtgttggagt tggtgaagaa
    28561 gttactcgag tgaaacctgt tttggtacaa gcgaggacgc ttgcaccatc tataagttga
    28621 atttaaacaa aagttataca tcagtctgat agtgccagcg tccacgctgg tacttttgta
    28681 taaaccaacc ctattttgca aaaaaacggt aaaaataaac cgcttgcctc cctatgggaa
    28741 aacttacagt ttaataaatc catcataaat gtgggtggca tcgccggtca tatacagagg
    28801 atgccctact ccttgccatt caataatcag cgttccaccg ggtaaatcca cctgcacttt
    28861 gttatctaac aagccttgca taatgccgac cgccactgtg ccgcacgcac cgctaccaca
    28921 ggcttgggtt tcgcctgctc cacgctcata cacccgtaat ttaacgtgat tgcgattcac
    28981 tacttgcata aagctgatat tcgcccgttc aggaaaacgc tcgtggcttt ctagtaacgg
    29041 cccgagttca tttaccgggg cggttttcac atcatcaact tgcagtacgc agtgcggatt
    29101 ccccattgaa accacgccac ataacacggt ttgtagctcg gtgcgtaaaa tatagttttt
    29161 ctcaaattta tttgctgtaa aaggcacttg cgaaggttcc caaatcggtt cgcccatatt
    29221 cacacgcact ttgccgtctt cttgcaaact tagcaccatt ttgccttttg cggtgctaac
    29281 gtgaatgtct tttttgttgg ttaagccttt gagcgtaaca aaacgggcaa aacatctcgc
    29341 cccattgcca cattgcgaca cttcactgcc gtctgcatta aaaatgcgat agtgaaaatc
    29401 taattcaggg tcgtaaggcg gttcaaccaa taaaagttgg tcgaaaccga taccacgatg
    29461 gcgatcagaa agcgtacgga tcatctcttc ggtaaggtaa acgttttggg ttacaccatc
    29521 aaccaccata aaatcattgc ctaagccgtg catttttgaa aattgcatat tattccttaa
    29581 ttaattagaa attttattga tttagattat agagattagt tttatttatt gatatagtac
    29641 gtgccgatta atttgatgaa aaatgcagat tttttcaaac acagagtttc atttacttat
    29701 ttaggagcaa aaaattatgt ctgcgatgtt tattatccaa tttgccatag tgttactatg
    29761 cattttggtt ggcgcccgtg taggcggtat cggattaggg gtgttcggtg gcttgggctt
    29821 agccattctt tcatttgggt ttgggctaaa acctgccggt ttaccgattg atgtaatgtt
    29881 tatgattatg gcggttgtgt cggctgcagc agccatgcaa gcagccggtg gtttggacta
    29941 tatgatcaaa attgccactc gcattttgcg taaaaacccg aaatacatta cctttatcgc
    30001 accgcttgta acttggacat tcaccgtgct tgccggtaca ggtcacgttg cttattctgt
    30061 attacctgta attgcagagg taagccgcca caacggtatc cgccctgagc gtccactttc
    30121 aatggcagta atcgcctcac aatttgcgat tgtcgccagc ccgattgctg cggcagtagt
    30181 tgctgtggtt gccttccttg aacctcaagg tgttacattg ggtaacgtgt taagtgtgac
    30241 tattcctgcg accttattgg gcttaggttt agcttgtgtg tttgtaaata aaatgggcaa
    30301 agaattaaaa gacgacccaa attatcaacg cttattgcaa gaccctgaat atgtgaaaga
    30361 aaatcacatt actaccaatc caaccgaatt accgttaaaa ccgactgcga aattatcagt
    30421 aggcttattc ctattcggtg cattattagt ggtattaatg ggcgcaattc cagctcttcg
    30481 ccctgtgttt gatggtaagc cgatggggat ggctcacacg attgaaattg tgatgttaag
    30541 tattggtgcg ttgattatct tcttctgcaa accggacggt aatgaaatca ccaaaggttc
    30601 tgtcttccac gccggtatgc gtgcagtgat tgcgattttc ggtattgctt ggttaggcga
    30661 taccttaatg caaggtcata tggacgaagt gaaatcaatg gtttcaggct tagttgaaac
    30721 cgcaccttgg gcatttgctt tcgcattatt cgtactttcc gtattggtaa acagccaagg
    30781 ggcaacggtt gcaaccttat tccctgtagc gattgctatc ggcattcctg caccggtgct
    30841 aatcggggta tttgtggcgg taaacggcta cttcttcatt ccgaactacg gcccgattat
    30901 tgcctcgatt gacttcgaca ccaccggcac aacccgtatc ggtaaatata ttttcaacca
    30961 tagctttatg ttaccgggct tacttagtat gattttcagt atcggatttg gtttattact
    31021 ttccaatatc ctactttaat cgctcgcaaa acctcccgtt tgggaggttt tttatttgca
    31081 aaattttcag caaaaacgac cgcttgtaac ggctcttgca agcattacac ctatcaaagt
    31141 aagcaaaagc ccaccgatta aatgtaaact cagcactgtc acaaactgcc cccatttttc
    31201 tgctaatagt ttttccgtta gttctaaaga gaaactggaa aaggtggtaa aactgcctaa
    31261 aaaaccgctg atgaacagca accgctggct ctcgcctaaa ttaaacccca ttgcaatacc
    31321 aattaacaaa caaccaagcc aatttgctgc taaagtacca aaggcgaatt ggctgagtat
    31381 cgggtttagc caaacggcta attgccagcg gcacatagct ccaagtaccg ccccgattga
    31441 aatcataagt attgaagaca tcatttttcc tcatctaacg ttttctcaca tcatacctaa
    31501 aaatgagtga tttagaaaaa taatgtgatg gatttcacaa atttgaaact tcctatttgc
    31561 ttaaaaaatg ccgctttggc aatatcactc cgaaatatgt tcatattcaa acattttttc
    31621 atcactttcc aatcattttc atcttaagga gaaactttat gagcaaatcc ttacgtaatg
    31681 cctgtattgg cgaatttatc ggtacaggtt ttattctttt cgggtatccg gatttagcgg
    31741 ttgatctgcg ctagacgtaa ttttgtaaat aaaccggatt ttagggttga cggaaaaggc
    31801 cagatgccct aatattagat tcaagagctg agaacaacgg ctcgggcata agcccaacgg
    31861 gcgcaccgcc gaacttggtg caggatagaa gccatgtcat acgatgcaaa tgatgcgctg
    31921 aatgaaatcg aagaggcgct tagcgagctt gaaagggttg ctgaagacct aatcaacaac
    31981 aacccgaata aagaatcaga attacgcggc caaggggttc accaagcgac aaagcacctc
    32041 cgttttcgta ttcgcaacat ccgccgcggc gaagcaattt gactaacatg ccgccctagg
    32101 ggcggctttc agcgaggtca gcatgaaaat caaactctat tttccggacg agtctatcgc
    32161 cacgataaag cgaatggggc ttcgccaaat gtctcccgag actctcaggt ggactgccga
    32221 tcatccgtca agcagctatg gtatgggcgc tttgctcaga ggcaagtctg gtgaaatcct
    32281 tgatgggaag tcttttgctg caatggtgca tgcctttggc gcgtggattg aaacagacag
    32341 tgaagatacc agtcgtcgag ttcataacgc gctagtcact gctgccactg gcaccgagga
    32401 atcggttaag gtggcaaagg agtaatgtcg aatatcctca actggcctga ttacaaagtg
    32461 ctccaggtat ccgaactgga gcacgattac caggtacacg ccgaagtttc cgaaccgcct
    32521 acgcagtgcc cccactgcaa tcatcctgaa atcgtcggct ttggtcgccg tgatgaggtg
    32581 atcatggata cacccgtcca cggaaggcgt accggcatca tgcttaaccg ccgtcgctat
    32641 cgctgccagt cttgccgaaa gacgtttctg gagcctgtac cgcacaaaga cgaaaagcgg
    32701 cagatgacca accgcctgat ccagtacatc gagcgcgaga gcctgcgccg cacgttctcc
    32761 agtgttgccg aggatgtggg cgtcgatgaa aagaccgtcc gtaacatttt caacgactat
    32821 tgtgaacgcc tcgaaaagac gctcaatttt gaaatgccgc agtggttggg tatcgacgaa
    32881 atccacatca tcaaaccccg ctgcgtgatc accaacattc agcagcagac cattgtggac
    32941 atgctggata accgcaataa aaccaccgtc acccgctacc tgagcaaacg cactgaccgc
    33001 gacctggtgc gctacgtggc aatggatatg tggaggccgt accggcaagc agtagaaacc
    33061 atgattcctg acgccacggt gatcatcgac aagttccacg ttgtcaggat ggcgaacgaa
    33121 tcactggaac gcgccagaaa agccatcaga agcgccctga cgccacagca gcgccgtggg
    33181 ttgatgcgag ataggtttgt cctactgaaa cgccgtcacg agctgacaga tgccgaatac
    33241 atgcgttttt caggctggac attgaattac cctgagattg gccaagccta cgaactgaaa
    33301 gaagcctttt tcgagatttg ggactgtcag acccggcacc aggcacagga ggcatattac
    33361 tcttggctgc gacagattac gccggaaatg aaagcccact atgacccgct tatcaaagcg
    33421 atgggcaact ggcacgatga cattttcgct tacttcgacc accccattac caacgcctac
    33481 accgagtcac tgaacaacct gattcgtgtt gttaatcgtg ttggccgtgg ctacagcttt
    33541 gaagcgctgc gagccaagat cctgtttact gagggcttcc agaagatcaa gaagccacgc
    33601 tatcagcgtc aacggatacc cgagggcgct atgggcagga tgccgttcta tggcgttgcc
    33661 gaagcggggc catccactaa ctacggcgct gacatatcaa cactggtgcg ggagattgag
    33721 gcgggg
//
LOCUS       DANMCL010000017        32658 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.017, whole genome shotgun sequence.
ACCESSION   DANMCL010000017 DANMCL010000000
VERSION     DANMCL010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32658
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.017"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..724
                     /locus_tag="PXF40_000730"
     CDS             <1..724
                     /locus_tag="PXF40_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5802100.1"
                     /translation="VVADKINLHFEQGKIYTLLGPNGAGKSSLLKTLFGEIAHQGTID
                     FDGNKLTSSHLHSWRKEIGYMPQDTQVEASLSALEVILLGQLDSLNMYISDELLNEAV
                     DIMDKLGISHLAHQDIMRLSGGQRQMVMFAQVLLRKPHILLLDEPVSALDMYHQINLL
                     EYVNAYTRANNLITIMVLHDLSLAAQFSDSVMLLSEGKFKHKAELVICWNAILFRDSI
                     MSILRFYMMETARRLSARFANV"
     gene            complement(815..1918)
                     /locus_tag="PXF40_000731"
     CDS             complement(815..1918)
                     /locus_tag="PXF40_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802101.1"
                     /translation="MKKLLLNSVFAATLLAFGATANAEIKTITDVLGREVKVDVPAKR
                     VALTFYYPDYIAVTGVENFDKVVGISREFWEKFNPGSWALFAEKMPNLKNIADLGYVN
                     SGTFSTEKTIALKPDVLVLPEIQYQALASEISRIEQAGIPVVVDFNKQTIENHTKSVR
                     VFGQLTGTEERAEKIAKEYEEGIADIQSCIDNAKVSKPKIYAEFGNKGPKEHSFTFGK
                     NMWGAIAETVRGDNISAPFVENWGQINPEQVLVSKPDVIMISGTELGNDTNPEIMSMG
                     INIEEADAQKRLKGFIERTGWKELPAVKSGRVYGLYHTASRSISDLASAQFMAKALYP
                     ELFKDIDPEKTYLDFHNNYLPITPKGTFFMQLK"
     gene            complement(2105..3112)
                     /gene="lipA"
                     /locus_tag="PXF40_000732"
     CDS             complement(2105..3112)
                     /gene="lipA"
                     /locus_tag="PXF40_000732"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HDL5802102.1"
                     /translation="MATSTAQTTATATVKKMSPFKMEKGVKYRDAAKTSVIQVRNIDP
                     DQELLKKPEWMKIKLPANSAKIDSIKNGMRRHGLHSVCEEASCPNLHECFNHGTATFM
                     IMGAICTRRCPFCDVAHGKPLPLDPDEPRKVAETVQDMKLKYVVITSVDRDDLPDRGA
                     AHFSATVREIKALNPHCKVEILVPDFRGRVEQAVAILKENPPDVFNHNLENVPRLYRE
                     VRPGADYKWSLELLKIFKQEFPHIPTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTI
                     GQYLQPSRHHLKVERYVPPAEFDMFREEAEKMGFEHAACGPFVRSSYHADLQAKGELV
                     K"
     gene            complement(3127..3780)
                     /gene="lipB"
                     /locus_tag="PXF40_000733"
     CDS             complement(3127..3780)
                     /gene="lipB"
                     /locus_tag="PXF40_000733"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HDL5802103.1"
                     /translation="MKLIIRQLGIQPYEEIWHQMQSFTDSRDGNTDDEIWLVQHPAVF
                     TQGSAGKPEHLLNPTNIPVVQSDRGGQITYHGEGQQIMYVLIDIKRLKSLGKEVSVRD
                     LVTALEQTVVQTLAEYGIESYPKADAPGVYVDGKKICSLGLRIRKGCSFHGLALNINM
                     DLTPFQNINPCGYAGLEMCQLSELVHRPDLRCEEVAPKLVAHFSTILGYNNQQIINN"
     gene            complement(3842..4141)
                     /locus_tag="PXF40_000734"
     CDS             complement(3842..4141)
                     /locus_tag="PXF40_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HDL5802104.1"
                     /translation="MSQPKAINLQDLPQAKLKDLLEFPCHFTFKVVGANREDLVDDVV
                     VVTQKYAKGDYNPRQQKSSKGTYNSVSIDIVAENIEQVETLYTELAKINGVRMVL"
     gene            complement(4309..5487)
                     /locus_tag="PXF40_000735"
     CDS             complement(4309..5487)
                     /locus_tag="PXF40_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HDL5802105.1"
                     /translation="MKKTLVKAMSVVGFAVSSIAYADLNTNFNLSAPQINAQTYILMD
                     YNSGEVLVSLNPDQRQYPASLTKMMTSYVVGEALKSGKVQNSDMVIVTENSWAQKFPG
                     SSLMFLDLNSKVSVGELMKGLIIVSGNDASVALAEHVSGSQAAFINEMNKYAQQFGLK
                     NTHFTTVHGLDDPEQYSSARDMAIIGSHIIRDQPEEYKIYAEKEFQYNIKKPQPNRNG
                     LLWDKTIQVDGMKTGHTDKAGYNLVASAINPNTRLISVVMGVPTYKGREVESKKLLQW
                     GFANFETIKSIPAAQSVAEQSVYYGEVNKVQLGSVQDSFVTIPKGRSADLKARYELEK
                     KNLEAPLAKGQVVGKMIYQLDGKDVASTNLQVLQDVPEAGIFGKAWDWIALTVKSLFD
                     "
     gene            complement(5501..6160)
                     /locus_tag="PXF40_000736"
     CDS             complement(5501..6160)
                     /locus_tag="PXF40_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HDL5802106.1"
                     /translation="MRLGKIVTLLLAGFLTFSSLNSLAATKNTKAKSSILAKKQATSK
                     AIKKVGISKVKKKEVVAKATKKKTISTVTTKPIKSTKKLARKVVKKTVTAKKKLVKKQ
                     HKPLVKKHFQTGVASYYANYFNGRRTANGETFNNAKMTAAHRTLPFGTLIEVTNLRNG
                     RSVVVRVNDRGPYAHARVLDLSSAAAKKIGMHHSGTARVKIAIVDKSKLGSTNQFYVM
                     N"
     gene            complement(6252..7379)
                     /gene="rodA"
                     /locus_tag="PXF40_000737"
     CDS             complement(6252..7379)
                     /gene="rodA"
                     /locus_tag="PXF40_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HDL5802107.1"
                     /translation="MNSGFKKLFWKIFSLDLLLLSGLLAITGYGLLVLYSASGANERM
                     FTSRLIQVSLGLGLMLIMAMVPPRFYQKVSPYLYIFCLILLILVDLVGETSKGAQRWL
                     NLGFVRFQPSEIAKLAVPLMVATYLGKRPLPPSFKDTFIALAIIIVPTLLVAIQPDLG
                     TSILVCSAGIFVLFLAGLSWKLIGAGVVFLAGFIPIMWFFLMHDYQKTRVMTLIDPNK
                     DPLGAGYHIIQSKIAIGSGGINGKGWMEGTQSQLEFLPEPHTDFIFAVLSEEHGMIGV
                     LILLAIYLFIIARGLVIGTKSDSAFGRILSGGTALLFFVYVFVNIGMVSGILPVVGVP
                     LPLFSYGGTSYVTLMAAFGLMMSTYVHRKRVGSNNPYDKLK"
     gene            complement(7372..9321)
                     /gene="mrdA"
                     /locus_tag="PXF40_000738"
     CDS             complement(7372..9321)
                     /gene="mrdA"
                     /locus_tag="PXF40_000738"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HDL5802108.1"
                     /translation="MFGKLAKFTASNQREKVRDGQAESNLYARRALVAFLGVLALSGV
                     LLTNLYHLQVVNYEDYQTRSNGNRIKLLPVPPARGLIYDRNGKVLAENLTYFGLFIVP
                     EKTENIEQTLTELKDIVGLTDEDIENYHKEKKRSSRYTPIMLKGNLNEAQMARFAVNQ
                     YRFPSLDVQAYYKRNYPYGELLTHIIGYVAKINENDKKKLQEAGKFGNYAGSHDMGKL
                     GIEKFYEDQLHGVTGFEEVEINNRGKVIRKLRDQAGVAGSSIRLSIDVELQQYVMSLI
                     AKHKGAVVVLDPRDSSILAMVSNPSYDNNLFVGGISGQDYKALLDDPTRPLYSRTTQG
                     TYPPASTIKPFMAVAGLEEGMITPSTTISDPGYWILPGTTQRYRDWKRSGHGATNVNK
                     AITESSDTFFYQLAYKMGIDKMSDWMKKFGFGVKTGIDIFEESAGVMPTREWKQKRYK
                     KPWVQGDTIPVGIGQGYWISTPLQLAKATAVLINNGRVNTPHLMLEVQSSNSVTPYQD
                     PLLYEDIKGVPDVYWNLAKQGMYNVNHAANGTARKVFAGAFYHSAGKTGTAQVFNLNG
                     KNYDKNAIKKELHDHAWFIGYAPYEQPKIVVALILENAGGGGSAAAPVARQIMDYALR
                     KGIGEQPDSQNSEQNKPLVTEEHHE"
     gene            complement(9345..9812)
                     /gene="rlmH"
                     /locus_tag="PXF40_000739"
     CDS             complement(9345..9812)
                     /gene="rlmH"
                     /locus_tag="PXF40_000739"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HDL5802109.1"
                     /translation="MKIQLIAVGTKMPAWVTTGFEEYQRRFPKEMPFELVEIPAGKRG
                     KNADTKRILELEGKAMLAAAGKAKIVTLDIPGKAWTTEQLATQLEGWKNDGRDVALLI
                     GGPEGLSPECKAAAEQSWSLSPLTLPHPLVRVVVAESLYRAWSVTINHPYHRE"
     gene            complement(9889..10203)
                     /gene="rsfS"
                     /locus_tag="PXF40_000740"
     CDS             complement(9889..10203)
                     /gene="rsfS"
                     /locus_tag="PXF40_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HDL5802110.1"
                     /translation="MEQNLVEFLTKTLDDLKAQDILAIDVKGKSSITDTMILATGTSS
                     RHVASTAERLITEAKQAGFEVFGDEGKAVADWIVVDFGKAMVHLLQSDSREMYQLEKL
                     WA"
     gene            complement(10371..11240)
                     /locus_tag="PXF40_000741"
     CDS             complement(10371..11240)
                     /locus_tag="PXF40_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5802111.1"
                     /translation="MFKKYFGEIILFLVTFIAAAGWFFSKHALVGLPPIGFMGGRFIL
                     ASLILLPFSYRELYRLDKVQVKYSVITGLTYGIYTIFWVLGLAFSTVFGEGAFLVSLA
                     MLIAPLLSWLIFKHTPPKIFWLALPIALSGLYFLSAEKGIFHFSLGSTIFLVSSVFGA
                     LYFVLNNQYAKQVSLFPLITIQLAIVGAVCSLYSYFMESWHFPILTEVWLWFAASVLI
                     ATNLRFLMQTLGQKYCHIGTSALIMLLEPVWTLLLSVMLLGEQLSATKWLGCSLILIA
                     LIIYRLPILRLKK"
     gene            complement(11291..12475)
                     /gene="uxuA"
                     /locus_tag="PXF40_000742"
     CDS             complement(11291..12475)
                     /gene="uxuA"
                     /locus_tag="PXF40_000742"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HDL5802112.1"
                     /translation="MEQAWRWYGPNDPVSLDDVRQAGATGIVTALHHIPNGQVWSVEE
                     INKRKALLAEKGLVWSVVESVPVHEEIKTQTGNYQQWIDNYKQTLRNLASCGIDTVCY
                     NFMPVLDWTRTDLEYEMPDGSKALRFDQVAFAAFELYILKRPGAEATYSSAEQAEAKA
                     YFEQMSDADIAKLTKNIIAGLPGSEEGYTLEEFQAQLDRYQGLSAEKFRTHLAYFLNE
                     IVPVAQEVGIRMAIHPDDPPRPILGLPRIVSTIEDMQWFVETQPLAANGFTFCTGSYG
                     VLAENDLVKMAEQFADRIYFAHLRATQREENPQSFHEADHLAGDVDMFGVVKALLTEE
                     YRRKANGDHRLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAEFRGLELALKKVYF
                     ND"
     gene            complement(12505..13266)
                     /locus_tag="PXF40_000743"
     CDS             complement(12505..13266)
                     /locus_tag="PXF40_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FCD domain-containing protein"
                     /protein_id="HDL5802113.1"
                     /translation="MQNSSRTYTKIGKILKEEIAQGKYRVGDKLPTERDISERFEVSR
                     TIVREAIVMLEVEKLIEVKKGSGVYVIRVPELFPEDFPEEKDNELRDVGPFELLQARQ
                     LLESSIAEFAAQQATKQDIQVLRNILESEKKLLLEKMDDYSADKEFHLALAHMTGNDV
                     LIQLQEQLWRYRFNSAMWAQLHSRILQHDHHHLWIEDHERILNAIQRKNPALARKAMW
                     QHLENVKTKLLELSDVEDPKFDGYLFNVNPVVVGI"
     gene            13430..14455
                     /locus_tag="PXF40_000744"
     CDS             13430..14455
                     /locus_tag="PXF40_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL5802114.1"
                     /translation="MEKPLKSVCLVEPNKVGIQTVSYPVKGENDVLIKVEGMGICGSD
                     IGAFRGTNPLVTYPRILGHEIVGTVIESGKGMPNNINVGDRVIIEPYIYCGHCYPCSI
                     GRTNCCESLKVLGVHIDGAMQEVVRHPAHMIIKTPDMPIHELALAEPLTISLHAIHRT
                     KVKAGEHVAIIGAGAIGLMAALVAKAYGATPILIDILDKRLDYAKSIGIPHTINPTKE
                     NDLEAIKSITNGRMAEVVIEASGANVAVQNTLKYTSFAGRIALTGWPKTETPLPTNLI
                     TFKELNIYGARTSKGAFEEALELLASRRIEPKDIISKVITFDEIPHYIEELSANPDDY
                     LKIIAVF"
     gene            14484..15467
                     /locus_tag="PXF40_000745"
     CDS             14484..15467
                     /locus_tag="PXF40_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5802115.1"
                     /translation="MKLKTFTKALLISSLMFTGSAFAKTIIKIGHYNSDVHPSNIALQ
                     EYFKKTIEEKTEGRYEIRIFPNNQLGGEDQIVNGLRNGTIEGGITGLLLQNVDPIFGV
                     WEWPYLFKDNAEAKKVLESPIAQEIGEKMEKYGIKLLAYGMNGFRVISSNKKVENFDG
                     FKGLRLRVPLNSLFVDWAKAMHINPQSMPLSEVFTALEQKVIDGQENPYMLIKDSGLY
                     EVQKYIIESNHIFSPGLLQLSLKTWNKMSKEDQTIFLEAAKLYQEKEWELAMKMEQDV
                     KDFFHKNGKEVIVPSEQFKADMLKASETLYQNFYQKYDWAKDVISKIHAAK"
     gene            15528..16007
                     /locus_tag="PXF40_000746"
     CDS             15528..16007
                     /locus_tag="PXF40_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5802116.1"
                     /translation="MQISTALDRTLKLLAIIALSTMIILVFFNAVLRYFFDSGIAWSE
                     EFARICFVYMIFLGIILVAKERGHLTVDIVVSALPAKVQMYLLFFADILVLVALSFIT
                     YGAYQLMLLTYTQKMPATEISSAFLYFAAVISSISYFAIVFTNLWKHIRLAFIKEEK"
     gene            16010..17281
                     /locus_tag="PXF40_000747"
     CDS             16010..17281
                     /locus_tag="PXF40_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005668000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease"
                     /protein_id="HDL5802117.1"
                     /translation="MLWLFLGSLFLFLFLGVPVALSMLLSASFMLWKMDMFDAQLITE
                     NFVMGTNNFPLMAIPFFMLTGEIMKHGGISERIINFAMSMVGHIKGGLGYVVIISGLI
                     FAGLSGSAVADTAALGAILIPMMVARKYDVARSTGLICAAGIISVVIPPSIPMIVYGI
                     TAGASITKLFMGGMVPGFLMVLGLWLVWKFLYRNEEQTVEPKKTGKERWAAFKSAFLP
                     LLLPIIIIVGLRGGIFTPTEAGVVAAIYAAIISIILKGLTLDKIQDVFLGTIKTTAMV
                     MFVAAAAMISAFAVTVAQIPMELVEFIKGITDSPTVLMFVIMIFLLLVGCVMDLIPAV
                     LIFVPVLLPLLRAYNIDIAYFGIMMVINLSIGLITPPVGTVLYVGSGIAKIGIARLTK
                     GIYPFLLVYAAILFLLILFPEIIIVPMNWLS"
     gene            17293..18138
                     /locus_tag="PXF40_000748"
     CDS             17293..18138
                     /locus_tag="PXF40_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5802118.1"
                     /translation="MSIAQNHNFKDKVVVITGAGGVLCAYFAKEIAKTGAKVALLDIN
                     LEAAQNFASEIADEGYIAKAYQTNVLELESIKQARDEILKDFGTCDILINGAGGNNPK
                     ATTDNEFHDINLPENTKSFFELDKAGIEFVFNLNYLGTLLPTQVFAKDMLGKEGANII
                     NISSMNAFTPLTKIPAYSGAKSAISNFTQWLAVYFSKVGIRCNAIAPGFLVSNQNKAL
                     LFNADGTPTARANKILTNTPMGRFGQADELVGAILFLMDHHYSSFINGVVLPVDGGFS
                     AYSGV"
     gene            18155..19102
                     /locus_tag="PXF40_000749"
     CDS             18155..19102
                     /locus_tag="PXF40_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HDL5802119.1"
                     /translation="MKKLAILGECMIELNGEPFGEMHQTYGGDSLNTATYLARVSSPE
                     QIEVRYISALGTDKLSQGMLAAWQVDNINTDFVLRDEHRQPGLYLIQLDKQGERTFLY
                     WRNQSAARYLLQHPGYPKALSALNEVDMVYLSGISLAILPENDRTLLIAQLRELKTQG
                     VKIAFDSNYRPKLWESVAAAQAHYAELLQLVDLALVTFDDEQLLWGDVNEQATFDRLT
                     QYGIQTIVVKQGSLGATVLQNGERTFVPTVAVEKVVDTTSAGDSFNAGFLNGYLLGKD
                     VVTCCQQGNAVAGIVIQHKGAIIAKSATTHLKSQFEQSI"
     gene            19190..19828
                     /locus_tag="PXF40_000750"
     CDS             19190..19828
                     /locus_tag="PXF40_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HDL5802120.1"
                     /translation="MRYTTEQIIEKLRQLKVVPVIALDKAEDILPLAKTLSENGLPVV
                     EITFRSEAAEEAIKLVQANYPEVLIAAGTVLTKEQVLTAKNAGADCIVTPGFNPTIVK
                     YCQVLGLPVTPGVNNPMAIEAALELGIQAVKFFPAEASGGVKMIKALLGPYGNLQIMP
                     TGGISPQNINDYLAIPNVVACGGSWFVEKSLIKEQKWEEIGKLTKEVVELVK"
     gene            20052..21506
                     /locus_tag="PXF40_000751"
     CDS             20052..21506
                     /locus_tag="PXF40_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5802121.1"
                     /translation="MKKIVSTLLILTSNLAFAETTPAQLQEKMDNQRMQKNLHTLEKP
                     EPQAKPQAVNAQAHRQSISISSQQLLQQPELLNSAMLTALVTNHTENVQFLLPIYQQL
                     PASKQNSEVVQWAEAVNAKAKQNYSEAIKGYRQLLAKYPENQPIRMQLAVALFENREN
                     EAAEAQFYKLQADKLPQEIANAVNSYLEAIGKQDQWSFQGGLTYLNDPNINNAPNAGT
                     TYGNWTAPKKESAQGVGFHFEADKKWSWGNGFFHEFRLNGNGKYYWNNKKYNEYSLRE
                     SLGLGYQNAKQKITLLPFFEQMWYAGGSSQTESTKRYSNAGGVNARWQYWITPQWQSA
                     ISYEYAEQRYTRRQHLDGNYHFIAPSLYFYPNSRQYWFVGANFNRTSPRDLDDSFIRR
                     GVSIGWGQEWKNGLSTQLSASYARKQYRAPMPIFQITQRNSEYGVQASIWHRALHFKG
                     ITPRLTWQYNKVKSNHSFYSYDKNRVYIEFSHTF"
     gene            complement(21554..24151)
                     /gene="mutS"
                     /locus_tag="PXF40_000752"
     CDS             complement(21554..24151)
                     /gene="mutS"
                     /locus_tag="PXF40_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HDL5802122.1"
                     /translation="MTQDFSTHTPMMQQYLQLKAQNPDILLFYRMGDFYELFYDDAKR
                     AAALLDISLTKRGQSAGEPIPMAGVPYHAVEGYLAKLVALGESVAICEQIGDPATSKG
                     PVERKVVRIVTPGTVSDEALLPERQDNLVAAVYEEKGTFAIATLDMTSGRFLISELAS
                     KEALSAELQRVQPAEILYAEDFSAASILTNYKGLRRRPVWEFELVTAIQLLNRQFGTQ
                     TLAGFGVEKAVVALCAAGCVLHYAQETQRTALPHINAIHLAQHSDTILLDAATRRNLE
                     LTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKAITALIQYER
                     MSDLQPLLQQVGDMERILARVALRTARPRDLTRLRTALAQLPEIAKNSQNLTASIDQL
                     LAQLADFSPLHDLLERAIIENPPQLIRDGGVIAEGYNAELDEWRQLSDGATQYLENLE
                     IRERESTGIDSLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNAERYIIPELKTY
                     EDKVLKAKGASLALEKQLYDELFDVLMPRLGELQLAAMMLSELDVLTNLAERADSLGY
                     VCPSFSPMRMVNIKGGRHPVVEQVLTEPFIANPVFLNSQRHLLIVTGPNMGGKSTYMR
                     QIALITLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ
                     ATENSLVLIDEIGRGTSTYDGLSLAWACAEWLAKKTQSLTLFATHYFELTGLPNQLKG
                     VANVHLDAREHQDSIVFMHSVQEGAASKSYGLAVAALAGVPKQVIQLAKQRLAHLEEI
                     SHQTKQANEHPQADLLFSDGFDLQKNEAIQPLVVENEVEKALKALQPDELTPRQALDE
                     LYRLKKLLG"
     gene            24301..24864
                     /locus_tag="PXF40_000753"
     CDS             24301..24864
                     /locus_tag="PXF40_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5358 domain-containing protein"
                     /protein_id="HDL5802123.1"
                     /translation="MLRKIVLLSTGLLLAACSSNEPQQPEAFPGEFANADYVLSEENA
                     QKWVIASEQAKQCIYPNLTRIQQEHFSKEDSYIFSQYVFFYPLEEIIGEQYVKIIQND
                     EKSMGYAQYLFKKLKNNEAVEALPKKQCATLRTNAKNDLAVVKGQYQSGMIEETNSQE
                     GKSGDKVATNDNKFFFDIIKWGSMLLL"
     gene            25038..25667
                     /locus_tag="PXF40_000754"
     CDS             25038..25667
                     /locus_tag="PXF40_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HDL5802124.1"
                     /translation="MAVSATSFAQTTQPTAAEQMNAVKASVAEKATVAKEATKEKAAE
                     LKAGSAEKMAIAKAKTESFKDSAKNKMDAVKATTAEKTDVIKAKAASASDTMKVKAQE
                     AKAATAEKAATAHETLNSAKTATAEKAASMKAAATEKMSAVKKSQKVNINTANEEQLQ
                     SLTGIGEAKAKAIVEYRKKHGKIKNAAELANIPGIGDATIEKVAPYLTF"
     gene            25815..26444
                     /locus_tag="PXF40_000755"
     CDS             25815..26444
                     /locus_tag="PXF40_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5802125.1"
                     /translation="MALDFNSVGLDSVEAKGGYGIGLQIGQQLLGSGMDVNAETVARG
                     IYDVLNNNEPAIDINEVTAALQELGQRAEAAQAEAFKAIDAENKAFLEENKKANGVIV
                     TDSGLQYEILTEGTGEKPTATSTVRVHYTGSLIDGTVFDSSVKRGQPAEFPVNGVIRG
                     WTEALQLMPVGSKWRLTIPQELAYGERGAEASIPPFATLVFEVELLDIL"
     gene            26510..27025
                     /locus_tag="PXF40_000756"
     CDS             26510..27025
                     /locus_tag="PXF40_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HDL5802126.1"
                     /translation="MQKKSLISRLLKNIFLYGSLFIIISLVVDWYRSPSAPAQFEQTV
                     HYDIQHQPKVIAQLSHEKPMLLYFWGSWCHYCQVVSPNIQQLANDGTEVLGVALKSGD
                     ENDVQAYLNENGYTFATLNDPSGDFSRGWNIQATPTILIIKDGKIAHHTTGYTSYLSL
                     KFRLWLADVLY"
     gene            complement(27073..28003)
                     /locus_tag="PXF40_000757"
                     /pseudo
     CDS             complement(27073..28003)
                     /locus_tag="PXF40_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433453.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(28062..28712)
                     /locus_tag="PXF40_000758"
     CDS             complement(28062..28712)
                     /locus_tag="PXF40_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha4 family transposase"
                     /protein_id="HDL5802127.1"
                     /translation="MRKSRLSQYKQNKLIEQFVAGVTARTASELVNVNKNTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEVDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQFATLLPIIREKVKPDSIVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFGSQAKRHLRKFNGIPKVHFELYLKECEWRFNHSDLKSQISFLKQLVKGSLG"
     gene            29041..30399
                     /gene="mnmE"
                     /locus_tag="PXF40_000759"
     CDS             29041..30399
                     /gene="mnmE"
                     /locus_tag="PXF40_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HDL5802128.1"
                     /translation="MKDTIVAQATPIGRGGVGILRVSGPLAETVAQAVLGKTLPPRIA
                     NYLPFKDEDGTVLDQGIALFFKAPNSFTGEDVLELQGHGGQVILDLLLKRILQVKGLR
                     IARAGEFSEQAFLNDKLDLAQAEAIADLIDATSEQAARSALKSLQGEFSNKINALVDS
                     VIYLRTYVEAAIDFPDEEIDFLADGKIEAKLNEIIAQLDGVRREAKQGSILREGMKVV
                     IAGRPNAGKSSLLNALAGREAAIVTNIAGTTRDVLREHIHIDGMPLHIIDTAGLRDAS
                     DEVERIGIQRAWEEIAQADHVLLMIDSTEQQADQFRQEWAEFLAKLPANMPVTVIRNK
                     VDLSGEQEGLIQVDDFTMIRLSAQTKVGVDLLREHLKKSMGYQSSTEGGFLARRRHLQ
                     ALETAAEHLERGHIQLTQFLAGELLAEELRMVQNALSEITGQFTSDDLLGNIFSSFCI
                     GK"
     gene            30400..31665
                     /gene="tilS"
                     /locus_tag="PXF40_000760"
     CDS             30400..31665
                     /gene="tilS"
                     /locus_tag="PXF40_000760"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HDL5802129.1"
                     /translation="MALFNRFQTQCATHLPNQTAFLIGLSGGVDSVVLLHLFARTSFH
                     VRAIYVHHGLSPNADDWAAFCEQYCKRLNIPFILQKVRVDSSNGVENGAREARYQAIQ
                     QQLKPNEVFATAHHLDDQAETFLLALKRGSGVKGLSAMQAVTFLQNFTVFRPLLTFTK
                     SDLMGYAVQHQLGWIEDESNADNRYDRNFLRNSILPLLNQRWQHFSQMVARSAQHCAE
                     QQALIEELLSNELKSRTGEKQQLNINGFGQFSLAKQQQLSRLWLEQNGVRMPSQAQLQ
                     AVISELIFAKADKNPQVKVGENIIRRYQQAIYVTEEIADIPPFEVVLPTETKVELPYQ
                     LGTIIRQQQEIICKKNGKNHRLQLPQELAQSTISIKIGQLGKVKCYGKAQREEMKKIW
                     QNHGIPVWERNRTPLIFWQDELVGLLPIL"
     gene            complement(31655..32548)
                     /gene="xerD"
                     /locus_tag="PXF40_000761"
     CDS             complement(31655..32548)
                     /gene="xerD"
                     /locus_tag="PXF40_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HDL5802130.1"
                     /translation="MAELDPIIEQFLDTLWQEHGLSENTVASYRSDLERFSDYFSEPK
                     AFLSLDHIDLQGFLGERLEQGYKATSSARMLSCLRKFFRFLCLEHYRQDDPTLTLSSP
                     KRGASLPKSLSEDQVMDLLDAPNTLDPIELRDKAMLELLYATGLRVTELVSLSMDNIS
                     LKQGVVRIIGKGDKERLVPLGEEANYWIQEFFQYGRPILLNNQQSDVVFPSRRGQQMT
                     RQTFWHRIKHYAVLAGIDADKLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQ
                     IYTQVAKARLKSLHQQFHPRG"
BASE COUNT         9654 a         7270 c         6536 g         9198 t
ORIGIN      
        1 agtggtggct gataaaatca atctacattt tgaacaaggc aagatctata ctttacttgg
       61 cccaaatggt gcgggtaaat cttctctcct taaaactcta tttggggaaa ttgctcatca
      121 aggcacaatt gattttgacg gtaataaatt aacctcaagc cacttgcata gttggcgtaa
      181 agaaattggc tatatgccac aagacacaca ggtagaggcc tcactcagtg ccttagaggt
      241 tattttatta gggcaacttg atagcctgaa tatgtatatt agcgatgaat tactcaatga
      301 agccgttgat attatggata aactcggtat ttcacatcta gctcatcaag atattatgcg
      361 gctaagtggc gggcaacggc aaatggtaat gttcgcacaa gtattgctac gtaaaccaca
      421 cattctgctg ctagatgagc ctgtcagtgc gttggatatg tatcatcaaa tcaacttact
      481 tgaatatgtg aatgcctaca ctcgagcgaa taacctaatt acaattatgg tgctgcacga
      541 tttaagcctt gcggctcaat tttcggatag tgtgatgcta ttaagcgagg ggaaattcaa
      601 gcacaaggca gagcttgtga tatgttggaa tgcgatatta ttcagagact ctataatgtc
      661 aatattgaga ttttatatga tggaaacggc tcgccgatta tccgcccgct tcgcaaatgt
      721 ttaaatattg attgctgttt gaaccgcaaa tagtaaaagc gaatacaagc ggtcattttg
      781 caaaataaat ctgcaaaatg accgcttgtt atttttattt cagttgcata aagaatgtgc
      841 cttttggcgt aattggtaag tagttgttgt ggaaatccaa atacgttttt tcaggatcga
      901 tatctttaaa caattcagga taaagtgctt ttgccataaa ttgagcactc gctaaatctg
      961 aaattgagcg agaagctgta tgatataaac cataaacacg ccctgatttt accgcaggta
     1021 actctttcca acctgtacgc tcaataaagc cttttaagcg tttttgagca tcggcttctt
     1081 caatattaat ccccatcgac ataatctcag ggttagtgtc gttgcctagt tccgtacctg
     1141 aaatcataat cacatcaggt ttagaaacta acacctgctc agggttaatc tgcccccagt
     1201 tttctacaaa cggggcacta atgttatcgc ctcgcaccgt ttcggcaatc gctccccaca
     1261 tatttttacc aaaggtaaaa ctatgctctt tcgggccttt attaccaaat tcagcataga
     1321 ttttcggctt acttactttt gcattatcaa tacagctctg aatatcagca atgccctctt
     1381 catactcttt ggcaattttc tccgctctct cttcagtgcc tgtaagctga ccgaaaactc
     1441 tcacgctttt tgtatggttt tcaatagttt gcttgttgaa atctactaca acaggaatgc
     1501 cagcttgctc aatgcgtgaa atttcactgg ctaacgcttg atattgaatt tcaggtagca
     1561 ctaacacatc tggttttaat gcgatggttt tttctgttga aaaagtacca ctattcacat
     1621 agccaagatc ggcaatgttt tttagatttg gcattttttc tgcaaataat gcccaactgc
     1681 ctgggttgaa cttttcccaa aactctcgtg aaatccctac taccttatcg aaattttcaa
     1741 caccggttac cgcaatatag tcagggtaat agaaagtcag tgcaacacgt ttagcaggca
     1801 catcaacttt gacctcacgc cctaatacat cagtgatggt tttaatttcg gcattggcag
     1861 ttgcaccaaa agcaagcaat gtggcagcaa atacgctgtt taatagtaat tttttcattg
     1921 gaactccaaa aagaaatgga aagttgaatt gtaactttct ataacaaata gtcaatgaaa
     1981 ataattcgca acaacgaaat tatctataga agagtaaatt agaagagatt acaagcggtt
     2041 taattttgct aaaactttgc aaaccacaaa aacaaagggc aaataatatt cgcccttatc
     2101 gattttattt caccaattcg cctttcgctt gtaaatccgc gtggtaagaa gaacgcacga
     2161 acggtccgca ggctgcgtgt tcaaagccca ttttttcagc ttcctcacgg aacatatcaa
     2221 actctgccgg tggcacataa cgttccactt ttaagtggtg gcggcttggt tgtaagtatt
     2281 gcccgatggt gagcatcgtc acgccgtggt ctcgtaaatc ttgcattact tccaagattt
     2341 cttcgttggt ttcacctaag cctaccatta agccggattt ggtcggaata tgcgggaact
     2401 cttgcttgaa gattttcaat aattccaacg accatttgta atccgctccc ggacgaactt
     2461 cacgatagag acgtggcaca ttttctaggt tgtggttaaa gacatcaggt ggattttctt
     2521 tgagaattgc caccgcttgc tccacacgtc cacggaaatc aggcactaaa atttcaacct
     2581 tacaatgcgg atttaaggct ttgatttcac gcacggtcgc agagaaatga gccgcaccac
     2641 ggtcgggcaa atcatcacga tccactgagg taatcaccac atatttgagt ttcatatctt
     2701 gcaccgtttc tgccactttg cgaggttcgt ccgggtcaag cggaagcggt ttgccgtgtg
     2761 ccacatcaca gaacgggcaa cgacgggtac agattgcccc cataatcata aaggttgcag
     2821 taccgtggtt aaaacattcg tgtaaattcg ggcaagaggc ttcctcgcac accgagtgca
     2881 agccgtggcg acgcataccg tttttaatgc tatcaatttt tgccgaattt gccggcagtt
     2941 tgattttcat ccactccggt ttttttaaga gttcttgatc cgggtcgata ttacgcacct
     3001 gaatcacaga ggttttggcg gcatcacgat atttcacccc tttttccatt ttgaaagggc
     3061 tcattttttt cactgtagca gttgccgtcg tttgagctgt cgatgtagcc attactgtgt
     3121 tttatcctaa ttgttaataa tttgttggtt attatagcct aaaattgtgc tgaaatgagc
     3181 cactaatttt ggagcaacct cttcgcaacg caaatcaggg cgatgaacca gttcacttaa
     3241 ttggcacatt tccagccctg cataaccgca cggattgatg ttttgaaaag gcgttaagtc
     3301 catattgata tttaatgcca aaccgtggaa agagcaacct tttcgaattc gtaaaccaag
     3361 tgagcagatt ttcttgccgt ccacatacac cccgggtgca tcggcttttg gataactttc
     3421 tatgccatat tctgccaacg tttgtaccac ggtttgctcc agggcagtca ctaaatctcg
     3481 aaccgacact tctttaccca aggatttcag ccgtttgata tcaatcagca catacataat
     3541 ttgctgcccc tcgccgtggt aagtaatttg accgccacgg tcgctttgca ccaccggaat
     3601 attggttgga tttaacaaat gctccggttt gcctgccgat ccttgcgtaa acacagccgg
     3661 gtgctgaacc agccagatct catcatcggt attcccatca cggctatctg tgaaagattg
     3721 catttggtgc caaatttctt cataaggctg aatgcctagt tggcgaatta ttaatttcat
     3781 tttctatttt ccaacatcgc tttattgaaa aattgagggc gaatgtcatt cgcccctcgc
     3841 attataatac cattcttacg ccattaattt tggcaagttc cgtgtagaga gtttctactt
     3901 gctcaatatt ttccgccaca atatcaatcg aaacggaatt ataggtacct tttgagcttt
     3961 tttgctgacg tggattgtaa tcgcctttgg catatttttg cgtgaccact accacatcat
     4021 caaccaaatc ttctcggttt gctcccacca ctttgaacgt gaaatggcac ggaaactcta
     4081 gcagatcttt taatttggct tgaggtaaat cttgtaagtt tatcgctttg ggttgagaca
     4141 tttttgatcc ttcttctatt ctttcttcga ggggcgaaaa atttttcgcc actacacttt
     4201 ttatacattc atatctaaaa cggtaagcgg tgaaattttg caaatttttt gcaaaatcac
     4261 accgcttgca ttgctcccta gatggggata aaaaggcaaa taacaagatt aatcgaacaa
     4321 gctcttcaca gtaagggcaa tccaatccca cgctttgccg aaaataccgg cttccggtac
     4381 atcttgtaag acttgtaagt tagtgcttgc aacatctttg ccgtcaagtt ggtagatcat
     4441 tttacccact acctgccctt ttgctaaagg agcttcgagg tttttcttct ctaactcata
     4501 acgggctttt aaatctgccg agcgaccttt cgggatagtc acaaagctat cttgcaccga
     4561 gcctaattgt actttattga cttcaccgta atagacactt tgctctgcca ccgattgagc
     4621 tgccggaata gatttaatgg tttcaaagtt cgcaaagccc cattgcagta atttcttact
     4681 ttccacttca cgccctttat aagttggcac gcccatcact acagaaatta aacgtgtatt
     4741 cgggttaatt gctgatgcga ctaagttata gccggcttta tcagtatgcc ctgttttcat
     4801 accatcaact tgaatggttt tatcccacaa taatccgttg cggtttggtt gtggtttttt
     4861 gatgttatat tggaactctt tttccgcata aattttatac tcttccggct gatcacgaat
     4921 aatatgcgaa ccaataatcg ccatatcacg agcagaagaa tattgctcag ggtcatctaa
     4981 accgtgaaca gtggtaaagt gagtattctt taagccaaac tgttgggcat atttgttcat
     5041 ttcattaatg aacgccgctt gtgagcctga aacatgttca gcaagcgcca cagaggcatc
     5101 attacccgag acgataatca gccctttcat caactcacct actgaaactt tgctgtttaa
     5161 atctaaaaac attaatgaag agccggggaa tttttgcgcc cacgaatttt cggtgactat
     5221 caccatatca ctgttttgca cttttcccga ttttagggct tcaccaacta cgtagctagt
     5281 catcattttg gtcaatgatg caggatattg acgttgatcc ggatttaggc tcactaaaac
     5341 ttcaccggag ttgtaatcca tcaaaatata ggtttgtgcg ttgatctggg gtgccgataa
     5401 attgaagtta gtgtttaaat ccgcataggc aatgcttgaa accgcaaaac ctaccacgct
     5461 catcgctttc actaatgttt ttttcatatt ccctcttaaa ttaattcatt acataaaact
     5521 gattagtcga tcccaatttt gacttatcaa caatcgcaat tttcactctt gccgtccccg
     5581 aatggtgcat accgattttt ttcgctgcgg ctgatgataa atccaagacc cgtgcgtgag
     5641 cataaggtcc gcgatcattt acacgcacca ccacagaacg accatttcgt aaattcgtca
     5701 cttcaattaa agtaccaaat ggtaaagttc gatgtgcagc cgtcattttt gcgttattga
     5761 aagtctcccc attagcggtt cggcgaccat taaagtaatt tgcataatag ctggcaacac
     5821 cagtctggaa atgttttttg accagtggct tatgctgctt ttttaccaat tttttcttag
     5881 cggttaccgt tttcttgaca accttgcgag ccagcttttt tgtagattta atcggcttag
     5941 ttgtaacagt agaaattgtt ttcttttttg tagctttagc cactacttct tttttcttaa
     6001 ctttagaaat acctactttt tttattgctt tagaagttgc ttgcttcttg gctaaaatac
     6061 tcgatttagc ttttgtattc tttgtcgcag ccaaagaatt taatgaacta aatgtcagaa
     6121 atccagctaa caacagggtt acaattttac ctaatctcat ataagttttt tcctctatgt
     6181 ggatgtcgtt attgtttgta acgatgatcg tttcactgct ttttgatacc gcaaaaaagc
     6241 aaaagtttaa tttatttcag tttatcataa ggattattac tacctacacg cttacggtga
     6301 acataggttg acatcatcaa accaaatgcc gccatcagcg tcacatagga ggttccgccg
     6361 taactgaaaa gcggtaatgg tacaccgact acgggtaaaa taccactcac cataccaata
     6421 tttacaaaaa cgtaaacaaa aaatagaagg gctgtaccac ctgataatat acgcccgaaa
     6481 gcagaatccg attttgtgcc aatcactaaa cctcgggcaa taataaacaa ataaatcgct
     6541 aataaaatca gcacacctat cataccatgc tcttcgctta acactgcaaa aataaaatcg
     6601 gtatgcggtt caggtaaaaa ttcaagctgg gattgcgttc cttccatcca gccttttcca
     6661 ttaatgccac cagagcctat cgcaattttg gattgaataa tatgatagcc ggcacccaac
     6721 gggtctttat taggatcaat taaggtcatc acccgggttt tttgataatc gtgcattaag
     6781 aaaaaccaca ttatcgggat aaaaccggct aaaaacacca cacctgcgcc aattaatttc
     6841 caacttagcc ctgccaaaaa taaaacaaaa ataccggcag aacacactaa aatagatgtt
     6901 cccaaatcgg gctgaattgc caccaataag gttggcacaa taataatggc taaggcgata
     6961 aaagtatctt taaaactcgg aggaagcggc cgcttaccta aataagtggc taccatcagt
     7021 ggcacagcga gcttggcaat ctcagaaggc tgaaagcgaa caaatcctaa attcaaccaa
     7081 cgttgcgctc ctttactggt ttcgccgacc aaatccacca aaatcaataa tatcagacag
     7141 aaaatataca gataaggcga aactttttga taaaagcgag gaggtaccat tgccattatc
     7201 aacattagcc caagccctag cgaaacttga atcagtctac tggtaaacat ccgctcattt
     7261 gcaccgcttg cgctatatag tactaataaa ccataaccgg taatagctaa taatcctgat
     7321 aataaaagga gatcgagtga aaaaattttc cagaaaagtt ttttaaagcc actattcatg
     7381 atgttcctct gtgacaagcg gtttattttg ctcagaattt tgcgaatccg gctgttcacc
     7441 aatgcctttt ctcaaagcat aatccataat ctgacgagca acaggagccg cggcactacc
     7501 accaccgcct gcattttcta aaattaatgc caccactatt ttaggttgtt cataaggagc
     7561 atagccgata aaccaagcgt ggtcgtgcaa ctctttttta atcgcatttt tatcgtaatt
     7621 tttaccgttt aagttaaaca cctgagccgt accggttttc cctgctgaat gataaaatgc
     7681 accggcaaac acttttcgtg ccgtaccgtt tgcggcgtgg tttacgttat acattccctg
     7741 ttttgctaaa ttccaataga catccggcac gcctttaata tcttcataca acaatgggtc
     7801 ttgatacggc gtaaccgaat tactgctttg cacttcaagc attaaatgcg gtgtattcac
     7861 ccgcccgttg ttgattaaca ccgccgtggc tttcgccaac tgtaacgggg tcgaaatcca
     7921 gtagccctgc ccaatcccaa ccggaatagt atcgccctgc acccaaggtt ttttatagcg
     7981 tttttgtttc cattcacggg ttggcattac ccctgcggat tcctcaaaaa tatcgatacc
     8041 ggttttcact ccgaaaccga attttttcat ccaatccgac attttatcaa tccccatttt
     8101 ataggctaat tgatagaaaa aggtatcaga cgattcggta attgctttat tcacattagt
     8161 tgcaccgtgt ccgctacgtt tccaatctcg ataacgttgt gtagtgccgg gcaaaatcca
     8221 atagccgggg tctgaaatgg tggtagaagg ggtaatcatt ccctcttcca aacctgccac
     8281 cgccataaat ggcttaatag ttgaagccgg tggataagtg ccttgtgtag tacggctata
     8341 aagtggtcgg gttggatcgt ccaataatgc tttataatcc tgccctgaaa taccgcccac
     8401 aaataaatta ttgtcataac ttgggtttga gaccatcgct aaaatactgc tatcacgagg
     8461 gtcaagcacc accaccgccc ctttatgctt agcaattaac gacatcacat attgctgtaa
     8521 ttccacatca atactcaagc gaatactgct accggcaacc cctgcttggt cacgcaattt
     8581 acggattact ttccctcggt tattaatttc tacctcttca aaaccggtga caccgtggag
     8641 ctgatcttca tagaattttt caatccccaa tttccccata tcgtgcgaac cggcataatt
     8701 gccgaatttc ccggcttctt gcagcttttt cttatcgttt tcgttaattt tcgccacata
     8761 accgataata tgggttaaaa gctcgccgta aggataattc cgcttataat acgcctgcac
     8821 atctaaactt ggaaaacggt attggttcac cgcaaaacga gccatctgag cctcattcaa
     8881 attgcctttg agcataattg gggtatagcg agaactgcgt tttttctctt tatgataatt
     8941 ctcgatatct tcgtccgtca gcccaacaat atccttcaac tcggttaaag tctgctcaat
     9001 gttttccgtc ttttcaggca caataaacag cccgaaatag gttaaatttt ccgccaatac
     9061 tttaccgtta cggtcataaa ttaagcctcg agccggtggc acaggcaaca atttaatgcg
     9121 gttaccgttt gaacgggttt ggtagtcctc ataattcacc acttgcaagt gatacaagtt
     9181 ggttaataaa acaccactta acgccaacac ccccagaaac gcaactaagg cacggcgggc
     9241 atacagattg ctttctgcct gcccgtctcg caccttttct cgctggtttg aagctgtgaa
     9301 ttttgctaat ttaccaaaca tataacacta tctaaaatga ctcactactc tcgatgataa
     9361 gggtgattaa tggtaaccga ccacgcccga tacaaacttt ccgccaccac cacccgcacc
     9421 agtgggtgag gtaaggttaa aggcgacaac gaccaactct gctcggcagc ggctttgcat
     9481 tccggtgata atccttccgg gccgccaatc aataacgcta catctcgccc atcgtttttc
     9541 cagccctcta actgagtggc taactgctcg gttgtccacg ctttgcccgg aatatccaaa
     9601 gtcacgattt ttgccttgcc cgctgccgcc aacattgctt tgccttcaag ctcaagaatg
     9661 cgtttagtat cagcattctt gccccgtttt cctgccggaa tttccaccaa ctcaaacggc
     9721 atctctttcg gaaaacggcg ttgatactct tcaaaccctg tcgttaccca cgccggcatt
     9781 ttagtgccaa ccgcaattaa ttgaattttc atctctcttt cacttacaag cggtttaatt
     9841 tgcaaaaaat gttgcaaaaa tcaccgcttg tcgttcctta ttgaactgct acgcccaaag
     9901 tttctctaat tggtacatct cacggctatc ggattgcaac aagtgaacca ttgccttccc
     9961 aaaatcgacc acgatccaat cggcaactgc tttaccttca tctccaaata cctcgaaccc
    10021 agcctgtttt gcttccgtaa ttaaacgctc tgccgttgaa gcaacgtgac ggctcgatgt
    10081 accggtggct aaaatcatcg tatcagtaat gctagatttc cctttcacat caatggctaa
    10141 aatatcttgt gcctttaaat catctaaggt tttggttaaa aattcgacta aattctgttc
    10201 cacgtttctc tctctcatct tataaaaatg tagaatttta acatagattg aacggataaa
    10261 agaaagaaag cggtcatttt tgcaagattt tttgcaaaaa tgaccgcttg ttacttactc
    10321 taaaatgcct aactgcttcc aatactatgg catatttgct tttgttttac ctattttttg
    10381 agtcgtagaa tagggagtcg ataaataatc aatgctatca aaatcaagct gcaacctagc
    10441 cattttgtcg cactaagttg ttcccccaat aacatcacgc tcaataacaa tgtccaaacc
    10501 ggctcaagta acataatgag tgcagaagta ccaatatggc aatatttttg ccccagtgtt
    10561 tgcattaaaa aacgtaaatt tgtcgcaatc aatacacttg cggcaaacca gagccacact
    10621 tcggtgagaa tcgggaaatg ccaactttcc ataaaatagg aatacaagct acagaccgca
    10681 ccgactatcg ccaattggat agtaattaat ggaaacaatg agacttgttt ggcgtattga
    10741 ttatttaaca caaaatataa cgccccaaac actgatgaca ccagaaaaat cgtactgcct
    10801 aaggaaaaat gaaagatgcc tttctccgca gaaagaaagt aaagcccact taatgcaatg
    10861 ggtaaggcta accaaaaaat cttcggtggc gtatgtttga atatcaacca agagagcaaa
    10921 ggagcaatca gcatcgcaag gctcaccaaa aaagcccctt caccaaacac tgtactaaaa
    10981 gccagcccca atacccaaaa aatagtataa attccgtaag taagaccggt aatcaccgaa
    11041 tatttaactt gaaccttatc taaacgatac agctctcggt aagaaaaagg cagaagaatc
    11101 aaagaggcta atataaaacg ccctcccata aagccaatag gcggtaatcc aactaaagcg
    11161 tgtttagaga aaaaccaccc cgctgcagca ataaaggtaa cgagaaaaag gattatttcg
    11221 ccgaaatatt ttttgaacat atcaaactat aaaatgccct ctacagtaga gggcattata
    11281 ataaataagg ctaatcgtta aaatagactt tcttaagtgc caactccaat ccacggaact
    11341 ccgctaatcc tcttaaacga ccaatcgcag aatagcctgg gttggttttt ttcttcagat
    11401 catcgagcat ttgatggccg tgatccggac gcattggaat taatcggtga tcgccatttg
    11461 ccttgcggcg atactcttcg gtaagtaatg ctttcaccac gccaaacata tcgacatcac
    11521 cggcaagatg atccgcttcg tggaaacttt gtggattttc ttcacgttgg gtagctcgta
    11581 agtgagcaaa ataaatgcga tctgcaaact gctctgccat tttgaccaaa tcattctcgg
    11641 ctaatacgcc gtatgaaccg gtacagaacg tgaagccatt ggctgcaagc ggttgagttt
    11701 ccacaaacca ttgcatatct tctatggttg aaacaatgcg tggcaagcct aaaatcgggc
    11761 gaggcggatc gtcagggtga atcgccatac gaatgcccac ctcttgtgca accggcacaa
    11821 tctcatttaa gaaataggct aaatgggtac ggaatttttc agccgagagc ccttgatagc
    11881 ggtcaagctg tgcttggaat tcttcgagcg tatagccttc ctcagacccc ggcaaaccgg
    11941 caatgatatt tttggttaat tttgcaatat cagcgtcact catctgctca aaataggctt
    12001 tggcttcggc ttgttctgct gatgagtaag tggcttccgc tcccgggcgt tttaagatat
    12061 ataactcaaa cgccgcaaac gccacttggt caaaacgcaa tgcttttgag ccatcaggca
    12121 tttcatactc cagatcggta cgagtccaat ctagcaccgg cataaagtta tagcacaccg
    12181 tatcaatccc acagcttgcc aaattacgca aggtttgctt atagttatca atccattgct
    12241 gatagttgcc tgtttgagtt ttgatttctt cgtgaacagg cacactttct accaccgacc
    12301 aaaccagccc tttttcagct aataatgcct tacgtttatt aatttcctca accgaccaca
    12361 cctgcccgtt gggaatatgg tgcaacgctg tcacaatccc cgttgcccct gcttgtctta
    12421 catcatctaa agataccgga tcgtttggtc cataccaacg ccatgcttgt tccatagtaa
    12481 actcctcatt gtgtagttta ggttttagat acctactaca acggggttta cattgaatag
    12541 atatccatca aatttaggat cctctacatc agacaattca agcaatttag ttttaacatt
    12601 ttctagatgt tgccacattg ctttacgagc taatgcagga ttttttctct gtattgcatt
    12661 taaaattcgc tcatgatcct ctatccacaa gtggtgatga tcatgctgta aaattctgga
    12721 gtgtagctga gcccacatcg cactattaaa gcggtatcgc caaagctgtt cttgtaattg
    12781 aatcagaaca tcgttacccg tcatatgagc taatgcaaga tgaaattcct tatctgcact
    12841 gtagtcatcc atcttctcta acaaaagttt cttctcactt tctaatatgt tacgaagtac
    12901 ttgtatatct tgtttggtag cctgctgtgc tgcaaactca gcaatactgc tttctaataa
    12961 ttgtcgtgct tgaagtagtt caaatggccc aacatccctt agctcattat ctttctcttc
    13021 tggaaaatct tctggaaaaa gctccgggac tctaatgaca tacacgcccg atcctttttt
    13081 tacctcaata agcttttcta cttctagcat cactatcgcc tcccttacga tagttctact
    13141 cacttcaaat ctttcagaaa tatctctctc agtaggtaac ttatctccta ctctgtattt
    13201 tccttgagca atttcctctt tgagaatttt tcctatttta gtgtaagttc tggaactatt
    13261 ttgcataaat cctcacgaaa ttggaattcc aaaatttcat ttttgtgatc aggttcacaa
    13321 aatcacaaaa attggaatgc caaacttgtt ttttggtgtt agtatctgtg cataaaatac
    13381 cattgacact acaaaatgtc gattaacttt atcaaaaaag gacaaaatca tggaaaaacc
    13441 actcaaatca gtatgtcttg tagaacctaa taaagttggt atacaaaccg tttcttatcc
    13501 tgttaaaggt gaaaatgatg tgctaatcaa agtagaaggt atggggatat gtggctctga
    13561 tattggagca tttagaggca ctaatccact tgttacttat cctagaattt tagggcatga
    13621 aatcgttggc acagtaattg agtctggtaa aggtatgcca aataatatta atgtaggaga
    13681 tcgtgtcatc attgaacctt acatctattg tggacattgc tatccctgct ccattggtag
    13741 aacaaattgt tgcgaatctc taaaagtatt gggggtacat attgatgggg caatgcaaga
    13801 ggttgttaga catccagccc atatgataat caaaacacct gatatgccaa tacacgaatt
    13861 agcgttagca gaacccttaa ctatttcctt acacgcaatt catagaacaa aagtcaaagc
    13921 tggtgaacat gttgctatca ttggagcagg ggcaattggg ctaatggctg cattggttgc
    13981 caaagcttat ggagcgacgc cgattttaat tgacatttta gataagcgat tggattacgc
    14041 aaaatctatt ggtattccac acacaattaa tccaacaaaa gaaaacgatc ttgaagctat
    14101 taaatcaatt accaatggaa gaatggcaga ggtggttatt gaagcgtcag gagcaaatgt
    14161 cgcagtacaa aatacgctta aatacacctc ttttgctgga cgtattgctt taaccggatg
    14221 gccgaaaaca gaaacaccat taccaactaa tttaatcacc ttcaaagaac ttaatattta
    14281 tggggcaaga acaagcaagg gggcatttga agaagcatta gagcttctgg catcaagaag
    14341 aattgaacca aaagatatca ttagtaaggt aattacattt gatgaaatac ctcactatat
    14401 cgaagaactc tcagctaatc ctgatgatta cttaaaaatc atcgctgtat tttaaatact
    14461 aactcaccta cgaggtaata actatgaaac tcaaaacttt cactaaagct ctattaattt
    14521 ctagcctgat gttcaccggt tcggcatttg cgaagactat cattaagatt ggtcactata
    14581 attcagatgt tcatccatca aatatcgcat tgcaggaata cttcaaaaaa accattgaag
    14641 aaaaaacaga aggacgctac gaaatccgta ttttcccaaa taaccagttg ggaggagaag
    14701 atcaaattgt aaatggtttg cgtaatggca cgattgaagg tggcattaca ggtttattac
    14761 tacaaaatgt tgatccaatt tttggcgtat gggagtggcc atatctattt aaagataatg
    14821 ccgaagctaa gaaagttcta gaatctccta ttgctcaaga aatcggggaa aaaatggaga
    14881 agtacggcat taaattacta gcgtatggta tgaatggctt ccgtgttatc tcttccaata
    14941 aaaaagttga gaattttgat ggatttaaag gtttgcgatt aagggttcca ctaaattcgt
    15001 tgtttgtgga ctgggcaaaa gcaatgcata ttaaccctca aagtatgcct ttaagtgaag
    15061 tatttaccgc actagaacaa aaagtcattg atgggcaaga aaatccatat atgttaatta
    15121 aagattctgg tttatacgag gtgcaaaaat atattattga atctaatcat attttctcac
    15181 ctggcttact acaacttagt ttgaaaactt ggaataaaat gtctaaagaa gatcagacaa
    15241 tcttcttaga ggcagcaaaa ctctaccaag aaaaagagtg ggaattagcg atgaagatgg
    15301 aacaagatgt aaaagatttc ttccacaaaa atggcaaaga agtcattgtt ccgagtgaac
    15361 aatttaaagc tgatatgtta aaagcatccg aaacgcttta tcaaaatttc tatcagaaat
    15421 atgattgggc taaagatgtt atttcaaaaa tccacgcagc caaataagca ataagcgagg
    15481 cgaccggata aaagaggtcg cccatctaaa tgaagaagga gaaatttatg caaatttcta
    15541 cagcattaga tagaactctc aaactccttg cgataattgc tctatctaca atgattatcc
    15601 tagtcttttt taatgcggtt ttacgatatt tttttgactc cggaatagct tggtctgagg
    15661 aattcgccag aatctgcttt gtctatatga tctttctagg aataatcctc gttgcaaagg
    15721 aaaggggaca cctcaccgtt gatattgttg tttctgcact accggcaaaa gtacaaatgt
    15781 acttactgtt ctttgctgat attttagtct tagttgcact gtcatttatt acttacggtg
    15841 cataccagtt aatgttattg acatacacac aaaaaatgcc agcaactgaa atttcatctg
    15901 cgtttctata ttttgcagca gttatttcat ctatctccta tttcgctatt gtattcacaa
    15961 atttatggaa acatattcgg ctagctttca ttaaagagga gaaataaata tgttatggct
    16021 atttttagga agtctattcc tctttctctt tttaggagtg cccgttgctc tctctatgct
    16081 acttagtgcc agttttatgc tatggaaaat ggatatgttt gatgcccaat taatcacgga
    16141 gaatttcgta atgggtacaa ataattttcc gctgatggct atcccgtttt ttatgctgac
    16201 cggtgaaatt atgaaacacg gcggtatttc cgaacgtatt atcaattttg caatgagcat
    16261 ggtcggccat attaaaggcg gattgggcta tgtagtgatt atttcaggct taattttcgc
    16321 aggtttatcc ggctccgctg ttgctgatac cgcggctctc ggtgcaattc ttattccgat
    16381 gatggttgca agaaaatatg atgttgcacg ttcaacaggc ttaatctgtg cagcaggtat
    16441 tatttctgta gttatcccac caagcattcc aatgattgtc tatggtatta cagccggtgc
    16501 atcaattacc aaattattta tgggaggaat ggttccaggc tttttaatgg ttttaggttt
    16561 atggttagtt tggaaattct tataccgaaa cgaagaacaa accgttgaac cgaaaaaaac
    16621 aggtaaagaa cgttgggctg catttaaatc agcattctta ccattgctac ttccaattat
    16681 tattatcgta ggtttaagag gcggcatctt tacaccaaca gaagcgggag ttgtagcagc
    16741 aatttatgca gcaataatca gcattatctt aaaagggtta accttagata aaatccaaga
    16801 tgttttctta ggcactatca aaacaactgc aatggttatg tttgttgcag cggcggcaat
    16861 gatatctgca tttgcagtta ctgttgctca aatacctatg gagttagttg agtttatcaa
    16921 aggtattacc gatagcccga ctgtactaat gttcgtcatt atgattttct tattattagt
    16981 cggctgtgta atggacttaa tcccagcagt attaattttt gtaccagtac tattaccatt
    17041 actaagagcg tataacatcg atattgctta ctttggtatt atgatggtaa ttaacctatc
    17101 tatcggttta attacgcctc ctgttggaac ggtattatat gttggttctg gtatagcaaa
    17161 aattggtatt gctagattaa ccaaaggtat ctatccattc ttgctagtct atgctgcaat
    17221 actgttctta ttaatacttt tccctgaaat tattatcgta ccaatgaatt ggttatctta
    17281 ggagttctta ttatgtctat tgcccaaaat cataatttta aagataaagt tgttgttatt
    17341 accggagcag gtggtgtgct atgtgcttat tttgcaaaag aaattgcaaa aacaggtgca
    17401 aaagttgcac tactcgatat caatctagaa gcagcacaga attttgcttc tgaaattgcc
    17461 gatgaaggct atattgcgaa agcgtaccaa actaatgtac ttgaattaga aagcataaaa
    17521 caggcaagag atgaaattct aaaagatttt ggcacttgtg atattttaat taatggtgca
    17581 ggtgggaata atccaaaagc aacgacagat aatgaatttc acgatattaa cttaccggaa
    17641 aatacaaaat ctttttttga attagataaa gcagggattg aatttgtatt taatttaaat
    17701 tacttaggca cactattacc aacacaggtt ttcgcaaaag atatgttggg taaagagggc
    17761 gctaatatca ttaatatatc cagtatgaat gcctttactc cattaactaa aatccctgcc
    17821 tattctggag caaaatctgc aatcagtaac tttacacaat ggttagcagt ttatttctca
    17881 aaagtaggta tccgctgtaa tgctattgca ccgggatttt tagtgagtaa tcaaaataaa
    17941 gctctactat ttaacgccga tggtacgcca acagctagag ctaataaaat cctcacgaat
    18001 acccctatgg gacgtttcgg acaagccgat gaattggtag gtgcaatcct atttttaatg
    18061 gatcaccatt attccagctt tatcaatggc gttgtattac ctgttgatgg cggattctct
    18121 gcttatagcg gcgtgtaact tagaaggtat tcctatgaaa aaactcgcca ttctcggtga
    18181 atgtatgatt gagttaaacg gggagccgtt tggggagatg caccaaacct atggtgggga
    18241 ttcgctcaac accgctacct atttggctcg ggtgagttcg cctgaacaga ttgaggtgcg
    18301 ttatatttcc gctctcggca cggataagct cagtcaggga atgttagcgg cgtggcaggt
    18361 ggataatatc aacacggatt ttgtgttgcg tgacgagcac cgccagccgg ggctgtatct
    18421 gattcagttg gataaacagg gcgagcgaac gttcctctat tggcgaaatc aatctgccgc
    18481 ccgttatttg ttgcaacacc ccggctatcc caaagcactc tcggcactaa acgaggtaga
    18541 tatggtttac ttgagcggta tcagccttgc catcttgccg gaaaacgacc gcactttgct
    18601 gattgcacag ttgcgtgagc tcaaaacaca aggggtgaaa atcgcctttg acagcaatta
    18661 ccggccgaaa ctgtgggaaa gtgtggctgc tgcccaagct cactatgccg agctgttgca
    18721 attagtcgat ttagctctcg tgacctttga tgacgagcaa ctgctttggg gcgatgtgaa
    18781 tgagcaagcc acctttgacc gtctcactca atatggcatt cagaccattg tggtgaaaca
    18841 aggctctctg ggggcaacgg tgttgcaaaa cggggagcgt acttttgtgc caactgttgc
    18901 ggtagagaag gtggtcgata ccacttccgc cggcgattcc tttaatgccg gcttccttaa
    18961 cggttactta ttgggtaaag atgtcgttac ctgttgccaa caaggaaatg ccgttgccgg
    19021 tatcgtcatt cagcacaaag gggcgattat tgccaaatcc gccactactc atttgaaatc
    19081 gcagtttgaa caatccattt agaccaacaa tagcacaacg acaagcggtt aaatttgcaa
    19141 aattttttac aaaagcgacc gcttgcaata caacataatg aggctagaaa tgcgttacac
    19201 caccgaacaa atcattgaaa aattaagaca actgaaagtt gttcccgtga ttgctttgga
    19261 taaagcagaa gatattttac cgctggcgaa aaccctttcc gaaaacggtt tgccggtggt
    19321 ggaaatcact ttccgctcgg aagcagctga agaggcaatt aaattagtgc aagccaacta
    19381 tccggaagta ttgattgcag caggcacagt gctgaccaaa gagcaagtct taactgccaa
    19441 aaacgctggg gcggattgca ttgtgactcc gggttttaat ccgactatcg ttaagtattg
    19501 ccaagtgtta ggtttgcctg ttacaccggg tgtgaacaac ccgatggcga ttgaagccgc
    19561 cctcgaactt ggcatacaag cagttaaatt tttccctgcc gaagccagtg gcggcgtgaa
    19621 aatgattaaa gccctgctcg gcccttacgg caacttacag attatgccga ccggcggcat
    19681 ctcgccacaa aacatcaacg actacctcgc cattcccaac gtagtcgcct gcggcggctc
    19741 ttggtttgtg gagaaatccc tgattaagga acagaagtgg gaggagattg ggaaattgac
    19801 gaaggaagtg gttgaattgg tgaaataacc atttaaagtt ccaagcaatg agctattttc
    19861 tacccaaaat ggatctcttt cctcttattt acaaagcata acaaatattg catactttat
    19921 ttagtagcat atagtaggta tatttaaagc tatatattta acttaatgaa aaatatagca
    19981 aaacaacctc aaaactcttc actaaaggct attgaaaaat agccttttct attcaaataa
    20041 aagatagctt tatgaaaaaa atagtctcaa cgcttttaat ccttacctca aacctggcat
    20101 ttgcggaaac cacaccggct caacttcaag aaaaaatgga taaccagcga atgcagaaaa
    20161 acctacatac attagaaaag cctgaacctc aagccaaacc acaagcggtt aatgcacagg
    20221 ctcaccggca atcgatctct atttcaagcc aacagctgct tcaacagcct gagttgctca
    20281 actcggcaat gctaactgcg ttggtcacta accacactga gaatgttcaa ttcttactgc
    20341 ctatttatca acaattaccc gccagtaaac aaaacagcga agttgtacaa tgggcggagg
    20401 cagttaatgc caaagcaaaa caaaattatt cagaggcaat aaaaggctac cgtcagctac
    20461 tggcaaaata ccctgaaaat cagccaatcc gtatgcaatt agcggttgca ttgtttgaaa
    20521 atcgggaaaa tgaagccgca gaggctcaat tttataagtt acaagcggac aaattaccgc
    20581 aagaaattgc aaatgcggtc aatagctatt tggaggcgat tggcaagcaa gatcaatgga
    20641 gttttcaagg cggcttaacc tatttgaatg acccgaatat caacaatgct ccaaatgcag
    20701 gcacgaccta tggcaactgg actgcaccga aaaaagaatc cgcccaaggg gtcggctttc
    20761 actttgaggc ggataaaaag tggtcttggg gcaatggttt cttccacgag tttcgtttaa
    20821 acggaaacgg caaatattac tggaataaca aaaaatataa cgaatattcg ctcagagaaa
    20881 gcctcggctt gggttatcaa aatgcaaaac aaaaaatcac cttgttgccg ttttttgagc
    20941 agatgtggta tgccggtggc tcaagccaaa ccgaaagcac caaacgctac tccaacgcag
    21001 gcggtgtgaa tgcccgctgg caatattgga ttactccaca gtggcaatct gcaatcagct
    21061 acgaatatgc ggaacagcgt tacactcgcc gccaacattt agacggcaat tatcatttta
    21121 ttgccccgag cctctatttt taccctaaca gccggcaata ttggtttgtg ggggcgaatt
    21181 ttaaccgcac cagcccccgt gatttagatg atagctttat tcgccgaggt gtttctattg
    21241 gttggggaca agagtggaaa aacgggcttt caacccaatt aagtgccagc tacgcccgca
    21301 aacaataccg agccccaatg ccgattttcc aaattacaca acgtaacagt gaatatggtg
    21361 tgcaagccag catctggcac agagccttgc attttaaggg tattacccct cgcttaacgt
    21421 ggcaatataa caaggtaaaa agcaatcata gcttctatag ttatgacaaa aaccgtgtct
    21481 atattgagtt ttcacatacg ttctaaacaa aaacgcccct taaacggggc gatttcttag
    21541 ttattttttc aatttacccc aacaattttt tcaagcgata caactcgtcc aaagcctgtc
    21601 ttggggtaag ttcatcaggc tgaagggctt tcagggcttt ttcaacttca ttttctacta
    21661 caagcggttg aattgcttca tttttttgca aatcaaaacc atcggaaaac aacaaatccg
    21721 cctgtggatg ttcgtttgct tgtttggttt ggtgggaaat ttcctccaaa tgtgccaaac
    21781 gctgctttgc cagttgaatc acttgctttg gcacacccgc caaggctgcc accgccaagc
    21841 cgtaactttt gctggcggcc ccctcttgca ccgagtgcat aaacacaata ctgtcttgat
    21901 gttcacgcgc gtctaaatgc acatttgcca cccctttgag ctgattcggc aagccggtaa
    21961 gttcaaaata gtgggttgca aacaaagtga gtgactgggt tttcttcgcc agccattcgg
    22021 cacacgccca cgccagtgat aagccgtcat aggtagaagt gcctcgcccg atttcatcaa
    22081 tcagcacaag gctgttttcg gtggcttgat gcagaatatt cgccatttcg gtcatttcca
    22141 ccataaaggt tgaacgccct gaagctaaat catcgcttgc cccaattcgg gtgaaaatac
    22201 ggtcaatcgg gccgatttcc gcactttctg ccggcacaaa actgccgata tacgccatca
    22261 atgtaatgag ggcaatttgc cgcatatagg tgcttttacc gcccatattc gggccggtca
    22321 caatcaataa atgccgttgg gaatttaaaa acaccggatt ggcaataaac ggctcggtta
    22381 aaacctgctc caccaccggg tgtctgccgc ctttaatatt caccattcgc atcgggctaa
    22441 agctcgggca aacatagcct aaactatcag ctcgctcggc aaggttggtt aagacatcaa
    22501 gttcagacag catcatcgcc gctaattgca attcgcctaa gcgaggcatt aacacatcaa
    22561 acagttcatc ataaagctgt ttttcaaggg caagcgatgc cccttttgct ttcagcactt
    22621 tgtcttcgta agttttcagc tcagggataa tataccgctc cgcatttttg agcgtttggc
    22681 ggcgaacata gtgaatcggg gctttgtgtg cttgcccttg gctgatctga atgtaatagc
    22741 cgtgaaccgc attaaagccg attttcagcg aatcaatgcc ggtgctttca cgttctctga
    22801 tctccaaatt ttccagatat tgcgttgccc cgtccgaaag ttgccgccat tcgtcaagct
    22861 cggcattata accttctgca atcaccccac catcacgaat gagttgtggt gggttttcga
    22921 taatcgcccg ctccagcaaa tcgtgtaacg ggctgaaatc cgccagttga gccaaaagct
    22981 gatcgatact agcggtcaga ttttgtgaat tttttgcaat ttccggtaac tgagccaatg
    23041 cagtgcgtag tcgggtgagg tcacgagggc gagccgtacg caacgccact cgggcgagaa
    23101 tccgctccat atcgccgact tgttgtaata acggctgtaa atccgacatt cgctcatatt
    23161 gtatcaatgc tgttatcgcc ttttgtcggg cttgtaattt accacaatct cgaatcggct
    23221 gatgaatcca acgcttgagc agacggctcc ccattggggt cacacattta tctaacaccg
    23281 ccgccagcgt gttttccgtg ccacccgcta agttttgggt cagctctaaa ttgcgacgag
    23341 tagctgcatc gagcaaaata gtatcgctat gttgtgccaa atgaattgcg ttaatgtgcg
    23401 gtaaagcggt gcgttgcgtt tcttgggcat aatgcaagac acagccggca gcacaaagtg
    23461 ccaccaccgc tttttccacc ccaaatccgg caagtgtttg cgtgccgaat tggcgattta
    23521 gcagctgaat cgccgttacc agctcaaatt cccacaccgg acggcggcgt aaccctttgt
    23581 aattcgttaa aattgaggca gcggaaaaat cttccgcata cagaatttct gccggttgta
    23641 cacgttgtaa ctcggcggat agagcctctt tgctagcaag ttcactgatt aaaaaccgcc
    23701 cggaggtcat atctagcgta gcaatcgcaa atgtgccttt ttcttcgtaa actgccgcca
    23761 ccaagttatc ttggcgttcg ggtaacaatg cctcatcgct aactgttccc ggcgtaacaa
    23821 tccgtaccac tttgcgttct accggccctt ttgaggttgc tgggtcgcca atctgttcac
    23881 aaattgctac cgattccccc aacgccacca atttcgccaa atacccctcc actgcgtgat
    23941 aaggcacacc cgccatcgga atcggctcac cggcagattg ccctcgcttg gtgagcgaaa
    24001 tatccaacaa tgctgccgct cgtttcgcat catcataaaa cagctcataa aaatccccca
    24061 ttcggtaaaa caatagtatg tccggatttt gagctttgag ttgcaaatat tgttgcatca
    24121 ttggcgtatg ggtggagaaa tcttgtgtca tcagtctatt tattgtgaga aatcattgct
    24181 gatagtttaa cagattcagc caagggataa aaacaagcgg tcatttttcg ctgaaaattt
    24241 gcaatggtca gccgctgttt ttttgttaca atgcaccaaa tttttaaaac agaggtcaga
    24301 atgttaagaa aaatagtgct actttctaca ggcttattat tggcggcttg tagcagcaat
    24361 gaaccgcaac aaccggaagc attcccgggc gaatttgcca atgccgatta tgtgctttcg
    24421 gaagaaaatg ctcaaaaatg ggtaattgcc agcgaacagg caaaacagtg tatctacccc
    24481 aatttaaccc gtattcagca agagcatttt tccaaagaag attcttatat tttctcacaa
    24541 tatgtatttt tctatccgct tgaagagatt atcggggagc agtatgtaaa aatcattcaa
    24601 aatgatgaaa aatcaatggg ttacgctcaa tatttattca aaaaactgaa aaataacgaa
    24661 gcggttgaag cgttaccgaa aaaacaatgt gcgaccttac gcaccaatgc aaaaaatgat
    24721 ttggcagtgg taaaagggca gtatcaaagc ggtatgatcg aagaaaccaa tagccaagaa
    24781 gggaaatcag gcgataaagt tgccaccaat gataataaat tcttcttcga tattatcaaa
    24841 tggggcagta tgttacttct ctagtgagcc tcaatactcg gttgttttaa ccacaaccga
    24901 gccatttata cctaccgatt gaacttttat ctaaagcctc agtcttaaaa tacagttttt
    24961 ttcaattatt ttccctcttt tatatttaag gattttcaat aaaagcatta aaaacattat
    25021 tagcattggg cgtggcaatg gctgtttcag ctacttcatt tgcacaaacc actcaaccta
    25081 ctgcggctga acaaatgaac gcagttaaag cctctgttgc cgaaaaagca actgtggcta
    25141 aagaagcaac aaaagagaaa gcagcggagt taaaagccgg ttctgcggaa aaaatggcga
    25201 tagcaaaagc caaaaccgaa tcatttaaag attccgctaa aaacaaaatg gacgcagtaa
    25261 aagccaccac agcagaaaaa acggacgtga ttaaagcgaa agccgcatct gcaagcgaca
    25321 caatgaaagt gaaagctcag gaagcaaaag ccgccaccgc agagaaagct gcaactgctc
    25381 atgaaacctt aaattcagcc aaaaccgcaa ccgctgaaaa agcggcctca atgaaagcag
    25441 ctgcaacaga aaaaatgtca gcagtgaaaa aatcacaaaa agtgaatatc aacactgcca
    25501 acgaagagca attacaatcg cttaccggca ttggtgaagc aaaagccaaa gcgattgtag
    25561 aataccgcaa aaaacacggt aaaatcaaaa atgcagcaga actggcgaac attcccggca
    25621 ttggcgatgc aaccattgag aaagttgctc catatttaac tttctaatgt tctgcaagcg
    25681 gttattttgt tgcaaaattt tgcagaaaaa taaccgcttg ttcatttcac accttgtatt
    25741 cttaaatttc acccccatta agtgaatcgt atttctttca atacagtatt caataaactc
    25801 aaaaggaaca gaaaatggca ttagatttca attcagttgg attagattca gtagaagcaa
    25861 aaggcggtta cggcatcggt ttacaaattg gtcagcaact tttaggcagc ggaatggacg
    25921 taaacgcaga aaccgttgcc cgtggtattt atgatgtgtt aaacaacaat gagccggcaa
    25981 tcgacatcaa tgaagtgacc gctgcattac aagaattagg tcagcgtgcg gaagcggctc
    26041 aagcagaagc attcaaagcg attgatgccg aaaacaaagc gttcttggaa gagaataaaa
    26101 aagcaaacgg tgtaatcgtt accgacagcg gtttacaata tgaaatttta accgaaggca
    26161 caggcgaaaa accgactgcg acttcaaccg tgcgtgttca ctacaccggt tcattaattg
    26221 acggcaccgt gtttgacagc tcggtaaaac gcggtcagcc ggcagaattc ccggtaaacg
    26281 gagtaattcg tggttggaca gaagcattgc aattaatgcc ggttggctca aaatggcgtt
    26341 taaccattcc acaagaatta gcctacggcg aacgtggtgc agaagcatca attccaccat
    26401 ttgcgacctt agtgtttgaa gtggaattgc ttgatattct ctaatcaaac tcaaataaaa
    26461 aacctgtgga ggcatttcac aggtttttgc tatttaagat aactatatta tgcagaaaaa
    26521 atcactcata tctcgcttac ttaaaaatat tttcctctac ggcagcctgt ttatcattat
    26581 tagcctggtg gttgattggt atcgctcgcc ctccgctccg gcacaatttg agcaaaccgt
    26641 gcattatgat attcaacacc agccgaaagt aatcgcccaa ttaagccacg agaagccgat
    26701 gctactctat ttttggggaa gttggtgcca ctattgccaa gtggtttcgc caaatatcca
    26761 acaattagcg aatgacggca cggaagtttt aggtgttgcc ctgaaatccg gcgatgaaaa
    26821 tgacgtacaa gcctatctca atgaaaatgg ctacactttc gctactttga atgacccaag
    26881 cggtgatttc tctcgaggtt ggaacattca agccacccca accatcttga ttatcaaaga
    26941 cggtaaaatc gcccaccaca ccaccggcta cactagctat ttgagcttaa aattcagact
    27001 atggctggca gacgtgttgt attaaacgat tcctttcatt tgcaaaaaaa tccactaaat
    27061 ccgaccgctt gtttacacca aaaagacaag cggtactaaa ttcattgtca tcattgtggt
    27121 gatcgataaa atcagcctcg atgagccaaa aataaagcct cggtttttgc cgttgtcgaa
    27181 tttcaccagt aaatttgcca ttgctgtgag ggcgtacact tccaccaccg taaaaatcac
    27241 ggtgtaaata taggcagcgg tcagagttgc gacttttacc gcaataaacc aaggggcaat
    27301 aatcgccacc gctaataacg gcgaaatcca aattaattgc tgtttggtga ggttgatttt
    27361 acgagaaaaa gtcgattgca aactgacggt taaaacaccg ttgatgaata acgcaatcgg
    27421 cgaatgctcc ggtgcgtgca ggacattgtc gaataaatac ggaaaaatca ctcagcggca
    27481 caaatagcat taagtgagcg aacaaaaact ctttgttgat gatttcctta atttgtgcga
    27541 aacgaaattt cacgccgcca ttcacgcctt ccaccgaata aaacggcttg accataaacg
    27601 caaacaagcc ggcttccaaa ataaagcaga tccaaatcag cgtttcaatc atctcaaacc
    27661 taataaacgg aataataatc agcggggcga gcattgaaga catactggtg acttttagat
    27721 atttgccttg taaacgggtt ttagcagcat attcatcgcc ggcaatcgcc agtaaacagg
    27781 ctctggcatt agtgccgaat aagcaactcc ccaacccaaa gcaagtggtt gccaacaata
    27841 aaatgaggta attatccgct gctaaaaaca gcatataggc aaccacatct aataaacagc
    27901 ccaataacat catttttgcc aagccgtagc gatcccccca aatgccggct aaaattgcca
    27961 atgcctgatt acaaaacaac agcaatgaaa ggaaaaaagc gatttgggcg ttatctagcc
    28021 ctttctcttt taaataaaag aaaaggggct gtcctagata actaacctaa actaccctta
    28081 accaattgtt ttaaaaagga tatttgagat tttaagtcac tgtgattaaa acgccattcg
    28141 cattctttca aatacagctc aaaatgcact ttgggaatgc cgttaaactt acgcaaatgg
    28201 cgttttgctt ggctcccaaa attctcaatt ccattaatgt gattttgatt ttcagcgaag
    28261 tgtgtgctgt gattaatgcg aaaatggtta aattcactca catcaagcac atcataactt
    28321 cgatagaaat cggtgtaaac aatactatcg ggtttcacct tttcccgaat aatcggcaaa
    28381 agtgtggcaa attgcgtgtt tggtactacc acggtataaa cctttccgtc ccgctttaaa
    28441 agcccgaaca cggcggtttt gcctgctgca ccacgtccac gtttaccttt acgatgaccg
    28501 ccgaaataac tctcatcaac ctcaatttct ccctcaaaca tttccaaatg agggctatgt
    28561 tgatagataa gcaaccgcaa gcgatggaag taatacgccg ccgtgttttt gtttacattg
    28621 accaactcag atgctgttcg ggctgttacc cctgcaacaa actgctcaat gagtttgttt
    28681 tgtttgtact gacttagacg actttttctc atttgggtat cttaacctaa atggagtttt
    28741 tagtcgttat ctaggacagc cccaaagaaa aacacgcttt gcattgaaaa aaaggcggtg
    28801 gtggaaataa aacggcgtag gagtaatagt ttttctaaag acattcagaa tggttgaatt
    28861 ggttaaataa agagcggtta ttctaccttt taagtcaacc ccaatcaatc ggcttttgtt
    28921 ttacctttgg cgtgggtttc ggtatgataa gcgatatgta gtggcgggtc ctgtgcccgc
    28981 ctaaatacca atgataactt gcgggcgagc acaggactcg cccctacgat aaacaagaaa
    29041 atgaaagaca ccattgttgc tcaagcaaca ccgattggca gaggcggtgt ggggattctg
    29101 cgagtttccg gtccgcttgc cgaaaccgtt gctcaagccg tattaggcaa aacattgcca
    29161 ccccgtatcg caaattattt gccgtttaaa gacgaagatg gcactgtgtt ggatcaaggc
    29221 atcgccttat tttttaaagc tcccaactcc tttaccggcg aagatgtgct tgaacttcaa
    29281 ggacacggtg ggcaggttat tttagattta ctgctcaaac gcattttaca agttaagggg
    29341 ctacgcattg cccgagcagg tgaattttcc gaacaggcat ttttaaacga taagctcgac
    29401 cttgcccaag ctgaagcgat tgcggattta atcgacgcca ccagcgagca agccgctcgt
    29461 tcagccctga aatcactaca gggtgaattt tctaataaaa tcaatgcgtt agttgattca
    29521 gtaatttatt tacgcactta tgtggaagcg gcgattgact tccccgatga ggaaattgac
    29581 tttctggcag acggtaaaat cgaggcaaaa ttaaatgaga ttatcgctca attagacggt
    29641 gttcgccgtg aagcgaaaca aggctcgatt ctgcgtgaag gaatgaaagt agtgatcgcc
    29701 ggtcgcccga atgcagggaa atcaagcttg cttaacgcct tagccggacg agaggcggcg
    29761 attgtaacca atattgctgg cacaacccgt gatgtgttgc gtgaacatat tcacattgac
    29821 ggaatgccgt tgcatattat cgacaccgcc ggtctccgtg atgccagtga tgaggtggaa
    29881 cgtatcggca ttcagcgtgc ttgggaagaa atcgcccaag ccgaccacgt tttattaatg
    29941 attgacagca ccgagcaaca agccgatcag ttccgacaag agtgggcgga atttctagcc
    30001 aaactgccgg caaatatgcc tgtgaccgta attcgcaaca aagtcgattt atccggcgag
    30061 caggaaggct taattcaggt ggacgatttc acgatgattc gcctctctgc ccaaaccaaa
    30121 gtcggcgttg atttattgcg tgaacacttg aagaaatcaa tgggctacca aagttctacg
    30181 gaaggcggat tcttggctcg ccgccgtcat ctgcaagcat tggaaaccgc tgccgagcat
    30241 ttagagcgag ggcatatcca gcttactcaa ttcttagccg gcgaattgtt agcggaagag
    30301 ttgcgtatgg tgcaaaatgc cttaagtgaa attaccggcc agttcacctc tgatgactta
    30361 ttaggcaaca ttttcagctc attttgcatc ggtaaataaa tggcactttt taaccgcttt
    30421 caaacccagt gtgcaacgca tttgccgaac caaaccgcct ttttaatcgg cttaagcggt
    30481 ggggtggatt cggtggtact actccacctt tttgcccgca cctcatttca cgttagggca
    30541 atttatgtcc accacgggct aagcccaaat gcggacgact gggcagcctt ttgcgaacaa
    30601 tattgcaagc ggttaaatat tccctttatt ttacaaaagg tcagagtgga tagctcaaac
    30661 ggcgttgaaa acggggcgag agaagctcgt taccaagcca ttcaacaaca gcttaagccc
    30721 aatgaagtgt tcgccaccgc ccaccattta gatgaccaag ccgaaacttt tttgctcgcc
    30781 ctcaagcgag gcagtggagt caaaggatta tcggcgatgc aagcggtcac ttttttgcaa
    30841 aattttaccg tttttcgacc gctactcact tttactaagt cagatttgat gggttatgcc
    30901 gttcaacatc agctaggttg gattgaggac gaaagcaatg ccgataaccg ttacgaccgt
    30961 aatttccttc gcaatagcat cttgccacta ctcaatcaac gttggcagca cttcagccaa
    31021 atggttgccc gttccgctca gcattgtgca gaacagcaag ccttgataga agagctatta
    31081 agcaatgaac tcaagtcaag aacaggggaa aaacaacaac tcaacattaa cggctttggg
    31141 caattttcac ttgccaagca acagcaactt agccgccttt ggctggaaca aaacggagtg
    31201 agaatgccaa gccaagccca gctacaagcg gtcatttctg aactgatttt tgcaaaagcc
    31261 gataaaaacc cacaggttaa agtcggcgaa aatattatca gacgctatca acaagctatt
    31321 tacgttaccg aagagatcgc cgacattccg ccgtttgagg tagtacttcc cacagaaacc
    31381 aaagtggaat taccctatca gctcggtact attattcgcc aacaacaaga gatcatttgc
    31441 aaaaaaaacg ggaaaaatca ccgcttgcaa ctgccccaag agctggctca atcaactatt
    31501 tctattaaaa tcgggcaact aggcaaagta aaatgctacg gcaaggctca acgggaagaa
    31561 atgaaaaaga tttggcaaaa tcacggcata cctgtttggg aacgcaaccg tacaccgctg
    31621 attttttggc aagacgaatt agttggccta ttacctatcc tctagggtga aattgctgat
    31681 gaagcgattt caaacgggct tttgccactt gagtgtaaat ctgggtggtc gataaatcac
    31741 tatgccccag caacatctgt accactcgca aatcagcccc atgattgacc aaatgggtcg
    31801 caaaggcgtg gcgaagcacg tgaggcgaga gtttatctgc atcaatacct gcaagcacgg
    31861 catagtgctt aatccgatgc caaaacgtct gccttgtcat ctgctgacct cgccggctcg
    31921 gaaatacaac atcagactgc tgattattca gcaaaatagg gcgaccgtac tggaaaaact
    31981 cctgtatcca ataattcgcc tcctcgccca atggcactaa ccgctcttta tcccctttac
    32041 cgataattct caccacccct tgtttgaggc tgatattatc catcgaaagc gacaccagct
    32101 ccgttacccg cagaccggtg gcatacagca gctccagcat tgctttatcc cgtaactcta
    32161 tcggatctaa cgtattcggg gcatctagca aatccattac ctgatcttca cttaaggatt
    32221 tgggtaaaga agcaccccgt ttaggggaag aaagggttaa agtcgggtca tcttggcgat
    32281 aatgctcaag gcataaaaaa cggaaaaatt tccttaaaca actcaacatt ctggcagagc
    32341 ttgtcgcctt atagccttgc tccaaacgct cgccgagaaa accttgtaag tcgatatgat
    32401 cgagagacag aaatgcttta ggttcagaaa aataatcgga aaaacgctct aagtcagaac
    32461 gataagaggc aacggtattt tcagacaaac cgtgttcttg ccatagtgta tcgagaaatt
    32521 gttcaataat agggtcaagc tcagccatac aagcgggtat attttcagga aattttgcaa
    32581 attttaacag aattaaatct ataaaaatac aaaagcgata gaaacgaaaa aaccgattag
    32641 cttatgctaa tcggttta
//
LOCUS       DANMCL010000018        32329 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.018, whole genome shotgun sequence.
ACCESSION   DANMCL010000018 DANMCL010000000
VERSION     DANMCL010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 32329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32329
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.018"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..219)
                     /locus_tag="PXF40_000762"
     CDS             complement(<1..219)
                     /locus_tag="PXF40_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5802131.1"
                     /translation="MPTKPHKEYHELVELLISRGMLINDKSYAEKKLSQVGYYRLSGF
                     WHISRKPNQDGGLSENFLENVQFEEVYKL"
     gene            complement(431..2548)
                     /gene="spoT"
                     /locus_tag="PXF40_000763"
     CDS             complement(431..2548)
                     /gene="spoT"
                     /locus_tag="PXF40_000763"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HDL5802132.1"
                     /translation="MYLFEPLDRIIQGYLPPEQIERVKRAYVIARDAHEGQTRSSGEP
                     YITHPVAVASIIAEMKLDQEAVIAALLHDVIEDTPYTEEELAAEFGQSVADIVQGVSK
                     LDKLKFRTRQEAEVANFRKMILAMTKDIRVVLIKLADRTHNMRTLGALRPDKRRRIAK
                     ETLEIYSPLAHRLGIEHIKNELEDLGFEAMHPQRYRVLKMAIASARGHRKELIQRIAD
                     DIRGRLEEVQIEARVYGREKHLYSIYQKMRQKDQHFHSILDIYAFRVVVDNVDNCYRV
                     LGQMHALYKPRPKRVKDYIAVPKPNGYQSLHTSMIGPHGVPVEVQIRTEDMDKMADMG
                     VTAHWRYKEGESHHNTTVQLKAQQWLQSIVELQNSAGNTAEFIDSVKSDLFSDDIFVF
                     TPKGRIVELPANATAIDFAYAVHSGIGDRCVGAMVDRNPYPLSEPLRTGQTVEIITEQ
                     GKRPNASWLNFVVSGKARAKIRQSLKNQQHDEAIALGRRQLVRAMNLRSLDELCSETI
                     QSVLDELRLSSFDELLAEIGLGNQMSNVIAQRLLGEPLLIDTDGNPENNQPLKIEGIE
                     NRLISFANCCLPIPGDEIIAHVSSGKGLAIHNACCGNVKDYATEPSNYLPVEWEIAKE
                     KAIQFETEIVLDIINEPGVLAGITSTLAKLNSNIGSINSEAREGNIYQVRVQISVENK
                     EHSELILRKLLSVKGVVKAARKQ"
     gene            complement(2658..2939)
                     /gene="rpoZ"
                     /locus_tag="PXF40_000764"
     CDS             complement(2658..2939)
                     /gene="rpoZ"
                     /locus_tag="PXF40_000764"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HDL5802133.1"
                     /translation="MARVTVQEAAEKIGNRFDLILIAARRARQLQLHTREPLVPEEND
                     KPTVIALREIEEGLITTDIMDQLENHDSIKQEAAEQEAISFLTEMSNEA"
     gene            complement(3042..3539)
                     /locus_tag="PXF40_000765"
     CDS             complement(3042..3539)
                     /locus_tag="PXF40_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HDL5802134.1"
                     /translation="MAHFYEYLEFNSDEDRENQLEVYVEVKLSTDTEEKLQAVGVQGD
                     WLVMAEPYCPDCVEIVAYFQRMAKLNPNIKVKYVARKDNQERKHFDSDEQQQAVISAQ
                     KIPTIFDIRNGKTELVLSEFPQFLKDKMAANPEQFEQLKADFRMGKFGKEVEAELLAI
                     LLNTK"
     gene            complement(3564..4586)
                     /locus_tag="PXF40_000766"
     CDS             complement(3564..4586)
                     /locus_tag="PXF40_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005825060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5802135.1"
                     /translation="MSVTKKRLTLSDIAELSGVSKTTVSMILNGRGNDFRIKSETCQK
                     VKEIAKKHGYRANVYAKSLQAQRTNVIGLVIPDLTNYGFALTSRTLEKLCRENGLQLV
                     IACSDDTFEGEKKAIERLLDRQVDLLITAPTHNEPTYYQNAAQYTPMLQLDRYISGLN
                     IPSITSNDTQSISMLVENIVRAYHLKEFFYLGGQLSLSPSQNRLKGFREGLEQSHLAL
                     DENWVLHQDYQPESGYQMFAQIVEKLGRLPEAVFTASFTLLEGVMRYLTEHQQMDKLL
                     TQELHLATFDDHHLLNALPFHIHSIKQDHQQIAERTFELIQQKLAQQKIDDVKVDCEI
                     LWRKSI"
     gene            complement(4626..6056)
                     /locus_tag="PXF40_000767"
     CDS             complement(4626..6056)
                     /locus_tag="PXF40_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 32 protein"
                     /protein_id="HDL5802136.1"
                     /translation="MHIFNNGKYKSLHAQSEGELNALRQTVLSDPDFYPTYHLAPETG
                     LFNDPNGLIFDGEKYHIFAQWFPYGALHGMKHWQHFITTDFQTFSKGDLLIPDELFES
                     HGCYSGGAILWQDKIVAFYTGNTRRPSDNARIPHQNIAIFDKSGKLLEKRCIIDQAPA
                     GYTEHVRDPKPYLTAEGKIRFVLGAQRENLTGTALIYEMDDLNATPRLIAELEVHNFD
                     NSNVFMWECPDLFSLGGKDLFVWSPQGKLRESHQFQNNYHATYALGELNGNRLRAEHI
                     EELDYGFDFYAPQTVENSDRILFGWVGLPDLTYPTDKYQWHSMLTLPRKLSLQNGKVI
                     QNPIVNVGELQAVEMSENFAIENLDTAYLQISVENQPLVLDFFSNEQGQKLSLRFENG
                     VLSLDRSQTEQTELMEKFGSVRHCKIEQLETIEIFFDRSVVEIFVNGGEKVLTSRFFI
                     AKRENVVKSSRPIQVKVAKVLPISVE"
     gene            complement(6161..7084)
                     /locus_tag="PXF40_000768"
     CDS             complement(6161..7084)
                     /locus_tag="PXF40_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoimidazole riboside kinase"
                     /protein_id="HDL5802137.1"
                     /translation="MSKIWVTGDAVVDLIPDGEHHYLKCAGGAPANVAVGVSRLGVEA
                     GFIGRVGNDPLGKFMREVLQAENVCTKQMILDAQHRTSTVIVGLDNGERSFTFMVNPS
                     ADQFLEIGDLPEFNQGDFLHCCSIALINDPSRSTTIEGIRRVKKAGGYVSFDPNLRES
                     LWKSLDEMKTVVNSVVAMADILKFSEEELTLLTETETLEQATQAITAQYPEKLIIITL
                     GKDGAIYHFNGKSQVVAGKALKPVDTTGAGDAFVSGLLAGLAQTPNWHDETVLVEVIR
                     KANASGALATTAKGAMSALPNKAELDAFLAE"
     gene            complement(7201..8628)
                     /gene="miaB"
                     /locus_tag="PXF40_000769"
     CDS             complement(7201..8628)
                     /gene="miaB"
                     /locus_tag="PXF40_000769"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HDL5802138.1"
                     /translation="MAKLHITTWGCQMNEYDSSKMADLLNSTHGFELTENPEDADVLL
                     LNTCSIREKAQEKVFSQLGRWKNWKKDKPNLIIGVGGCVASQEGEHIRDRAPYVDIVF
                     GPQTLHRLPEMINQIRGGKSSIVDISFPEIEKFDRLPEPKAEGPTAFVSIMEGCNKYC
                     SFCVVPYTRGEEVSRPVDDVLFEIAQLAAQGVREVNLLGQNVNAYRGETFDGGICTFA
                     ELLRLVAAIDGIDRLRYTTSHPIEFTDDIIEVYRDTPELVSFLHLPIQSGSDRVLTMM
                     KRNHTALEYKAIIRKLRAVRPEIQISSDFIVGFPGETAEDFEQTMKVIEQVNFDMSFS
                     FIYSARPGTPAADLPDNVSDDEKKERLSRLQQRINHQAMQFSRAMLGTEQRILVEGPS
                     KKDLMELTGRTETNRVVNFVGTPDMIGKFVDVKITDVYTNSLRGEVIRTEDQMGLRVV
                     ESAESVIARTRKEDDLGVGKYVVNL"
     gene            complement(8845..9345)
                     /gene="crr"
                     /locus_tag="PXF40_000770"
     CDS             complement(8845..9345)
                     /gene="crr"
                     /locus_tag="PXF40_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005702996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HDL5802139.1"
                     /translation="MGLFDKLFGSKQKESQEIKIYAPLTGEIVNIEDVPDVVFSEKIV
                     GDGVAIRPSGDTIVAPVNGTIGKIFETNHAFSIESEEGVELFVHFGIDTVELKGEGFT
                     RLAQEGQTVKVGEPIIKFDLALLEGKAKSVLTPIVISNMDEISNLSKLNGQVVAGESV
                     VLTLTK"
     gene            complement(9430..11151)
                     /gene="ptsI"
                     /locus_tag="PXF40_000771"
     CDS             complement(9430..11151)
                     /gene="ptsI"
                     /locus_tag="PXF40_000771"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HDL5802140.1"
                     /translation="MITGIAASPGAVFGKALVLKEEPIVLNTRKITESEVEAEKAKFF
                     TGREKAAAQLTAIKEKARRTLGEEKEAIFEGHLMILEDEELEEEILSYLTDNLVTADV
                     AASKVIEMQASMLAEIDDEYLKERAGDIRDIGNRLVRNILNMNIVDLGDIQDEVILVA
                     YDLTPSETAQLNLDKVLGFITDVGGRTSHTSIMARSLELPAIVGTNNVTSLVKTGDFL
                     ILDAVNNEVHLNPSEEKIANFKALQEKLNAEKEELAKLKELPAQTLDGHKVDVAGNIG
                     TIRDVEGVLRNGGEAVGLYRTEFLFMDRTQLPGEEEQFQAYKEIVEAMNGQMVILRTM
                     DIGGDKELPYLDLPKEMNPFLGWRAVRIGFTRREILDTQLRAVLRASAFGNLAVMFPM
                     IISVEEIRLLKSIVAELKDQLRAEGHAFDENLKLGIMVETPSAAVNARHLAKEADFFS
                     IGTNDLTQYTLAVDRGNEIIAHLYNPLSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     VRATALLLGMGLDEFSMSGISVPHVKKLIRSINFADAKALADEALAQPTAADIERLVD
                     EFYQKLN"
     gene            complement(11273..11530)
                     /gene="ptsH"
                     /locus_tag="PXF40_000772"
     CDS             complement(11273..11530)
                     /gene="ptsH"
                     /locus_tag="PXF40_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HDL5802141.1"
                     /translation="MYSKDVVITAPNGLHTRPAAEFVKAAKGFASDITVTSGGKSASA
                     KSLFKLQTLGLTQGTTITISADGEDEQKAVDFLVDLIPTLE"
     gene            11791..13365
                     /gene="thiP"
                     /locus_tag="PXF40_000773"
     CDS             11791..13365
                     /gene="thiP"
                     /locus_tag="PXF40_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease"
                     /protein_id="HDL5802142.1"
                     /translation="MLSTLTKTTAWFIYFSIIALYVFSLWALMDYHQNDTLFVFSDIT
                     ATVAYSLLQASLSAVISLFLGSLLARSFFYLDFKGKNLLYKTISFIWALPSLVIIFAV
                     IGVFGNSGWLAKLFQQLGWNWQFNLYGLHGIILAHCLFNIPFVMKYYTGGLQLTPSSR
                     FQLAAQLNLTGWNYIQIVELPIIKTLLPYMFMTVFLVCFTSFPIVLMLGGSPKYSTLE
                     VAIYQAVTFEFDFAKALILIGVQFVVGIGLQLVMNYISTSALKKLKQQPNRVEIWKPK
                     PTGLAKLGLQAVIFLQSFAIILPLVSVIWAGLSVSKLSERLLNPTLWQATQYSLYLSL
                     IASIFVITISYLIALEARQLLYTKAKLRYSILTAITLFPLLLPIFLLSVGLFILLMNS
                     ELSSEALLLLVGICNGLTLLPFIYPMLFSAMWNSLTSHDKLAQGLGLKGLRRWWIVEK
                     NQLIRPLVTVFALAMSSSLGSFTVIAFFGNADFSSLPYLLYQQLGSYRTEDAAVTALI
                     LMLFALLPFLFSKDKL"
     gene            13362..14012
                     /gene="thiQ"
                     /locus_tag="PXF40_000774"
     CDS             13362..14012
                     /gene="thiQ"
                     /locus_tag="PXF40_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein"
                     /protein_id="HDL5802143.1"
                     /translation="MIELDLHFTYEQMNMHFQLSVKKGERIAVVGESGAGKSTLLNLI
                     AGFEKAESQQSQLWLNQKNHLDTEVAQRPVSMLFQDNNIFPHLTVEQNIGLALVPSLS
                     LNPKQKAQVKQIATQMGIETFLQRQADQLSGGQKQRVALARTLLRDKPILLLDEPFSA
                     LDPQRRAELQQIVFDICQSRNLTLLMVTHQLSESLFLFNRVITVADGEIVSDLSPL"
     gene            14319..15733
                     /locus_tag="PXF40_000775"
                     /pseudo
     CDS             14319..15733
                     /locus_tag="PXF40_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605131.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sucrose transporter subunit IIBC"
     gene            complement(15849..16652)
                     /gene="map"
                     /locus_tag="PXF40_000776"
     CDS             complement(15849..16652)
                     /gene="map"
                     /locus_tag="PXF40_000776"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HDL5802144.1"
                     /translation="MNNIPLRNEEEIQKLRVACKLASDVLVMIAPYVKEGVTTGELDK
                     ICHEYILANGATSASLGYHGFPKSVCISLNEVVCHGIPSDDKKLKKGDILNIDVTVIK
                     DGYYGDNSMMYVVGEPSVRDKRLMAVTLESLYVGIRTVKAGVRLKEIGTAIQKYVEKE
                     GFSVVREYCGHGIGTEFHCDPQVVHYATDDGGVVLKEGMVFTIEPMVNAGKKEVRLMG
                     DGWTVKTKDRSHSAQYEHQIVVTKDGCEVLTIRDEEIAEGRISRIMHNS"
     gene            complement(16738..17403)
                     /locus_tag="PXF40_000777"
     CDS             complement(16738..17403)
                     /locus_tag="PXF40_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HDL5802145.1"
                     /translation="MNFTTYFSDENKRRSLILLSLFHIFIIAISNYLVQISFEVQVPL
                     TEFSFPTTWGTLTFPFIFLATDLTVRVFGADLARKIIFVVMFPALVISYVISVLFFET
                     QFQGFSALTEFNFFVFRIALASFAAYLVGQLLDVLVFNSLRQGKRWWLAPTCSTIFGT
                     LIDTFVFFAIAFYKSSDEYMAEHWFTIGSVDYAFKLFVSLLLFLPLYGVILNFIMKKL
                     DLK"
     gene            17596..18285
                     /locus_tag="PXF40_000778"
     CDS             17596..18285
                     /locus_tag="PXF40_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HDL5802146.1"
                     /translation="MLQLRKANERGDGSFSWLKSYHTFSFANYYDLKHIHFSHLRVIN
                     EDFIAPNHGFGKHPHDNMEILTYMLKGRVAHEDSMGNKTEVKAGEFQIMSAGTGVFHS
                     EINPDPNETLHLYQIWIIPNQKDVTPRYNQDRFAPKEGATLILSPNAEEGSFKIYQDM
                     KLWRYQYPTAKSEQLALEPNRSYWLQVVKGNLNINGVELSTSDALGIRQEKALEINTQ
                     DDVEFLLFDLV"
     gene            complement(18353..19144)
                     /locus_tag="PXF40_000779"
     CDS             complement(18353..19144)
                     /locus_tag="PXF40_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5802147.1"
                     /translation="MNNLRIKMISPEIALAKYNELDVLEINHSKVKAKIALQGAQLLS
                     WQPKNTQQDVLWLSEIEPFQTGVAIRGGIPICHPWFGTDKKPAHGTARIQAWNLLEHT
                     SSADGIRVVLGLENQAKLEMILGEVCELYFTHLAPEPAQAALHTYFQVGDITKTEVQG
                     LATQCFDKLTNQEIEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETV
                     LWNPWHNTVSAMTETAYQNMVCVETARINTLLQQNETLGVRILVR"
     gene            19268..20272
                     /gene="fbp"
                     /locus_tag="PXF40_000780"
     CDS             19268..20272
                     /gene="fbp"
                     /locus_tag="PXF40_000780"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HDL5802148.1"
                     /translation="MKTLGEFIIEKQAEYPGAKGELSGILSSIRLAAKIIHREINRAG
                     LSQDILGTAGSENVQGEAQMKLDVFANETMKKALLAREDVAGFASEEDDNFVAFDNER
                     GRNAKYILMTDPLDGSSNIEVNVSVGTIFSIYRRVSPIGTPVTQEDFLQEGRKQVAAG
                     YVTYGSSTMLVYTTGNGVNGFTYDPSLGLFILSHPDLKTPTEGKYYSINEGQYVTFPQ
                     GVKRFIKYCQETDEAIKRPYSSRYIGSLVSDFHRNLLKGGIYIYPTSTVYPKGKLRLL
                     YECNPIAFLAEQAGGMATDGINPILDIKPTELHQRVPFFVGSTSMVKQAGEFMQEFAK
                     "
     gene            20456..24967
                     /locus_tag="PXF40_000781"
     CDS             20456..24967
                     /locus_tag="PXF40_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5802149.1"
                     /translation="MINKNFPLSYLASFVAFAVSLSATASVFRDDIDLQYYRDFAENK
                     GKFTVGASNIEIKDKSGNTLDALFPNVPMPDFSAANRNLGIATLVAPQYLVSVAHNTQ
                     YNTVEFGAPGTNADAHHYTYKVVDRNDYGIVEGGQHQDYQVPRLNKLVTEVAPATVTD
                     LGNNASAYQDSSRFTHFARLGSGRQIVKNTEHKDNQISTSYQYLTGGVHLPIAVHNSD
                     YWLDFRGNALNNSPYGALTAFGTRGDSGSGVYGYDQKTKRWLLLATYTFGTPANNYYN
                     RAGIIRQDYHDKQFAEDIAGTLTNAQQNAVFEWSAQGKDSSIGNKGKNLTVSLADRSI
                     KDNSASPLGYGGTPQLQLPQDNTGKTLNIEGQDSTIVLKTDIDQGAGALNFNANATVR
                     PENDQSWVGAGIVVAKGKQVNWQVKNPQGDRLSKLGEGTLHINGKGENLGDISVGQGT
                     VILTQQAGENGKKSAFNQVGIVSGRSTVVLNSADQVDPNKIYFGFRGGRLDLNGNNIA
                     FNRIQNSDDGARIVNNHLQKAATLTINGPKPPEATDLKWGTWKENSADIYEYINPHAN
                     NRTDYFTLKGNPNQYMPTNGASNAHWTFLSSNKDAAVKQVLAQKGLEHRYNSFNGFIG
                     ETDNTQHNGRLNVVYDPKASTPPATASEVTWGKGLVAGADIYLFTNPKTKIREYFALK
                     GDPKQPVPRGGLSSEHWEFLAADRNQAINKVLARKNAPIEQEKLNSIYTFSGGLNLNG
                     DLTVKGGKVLLSGRPTPHAYDAINKQDVVYADDWQNRQFKADNMQLNQYAQLYVGRNV
                     SNLQANLSANDHAQLHLGFINEQTPSCYYSEYTGKTSCDTQAVVSNEIFATLPTTQIN
                     GDVSLAEQSQLHIGKANLIGTIQAAATTSIRLANQASWTNTGDSRTGNLVAENGSTIN
                     LNEKFVTGEIPTRFNTLIIDGNFQGNAKINYLTDIAAGKGDHLQVNGLAEGTFTLALR
                     NSGKEAEVVSPLSLLTLTHQAQADKAKVSLENGYVDLGAYRYVLANRSNGYRLYNPLK
                     DAKDRNQSIATAKAELDHAIAEADKQKQEISRLNAEAEKERQAEKNAKQAAANAQSQL
                     SQANSELTRLQQYADYYRRYYPTYYRQIQGQITVAKQKVTQASAALTTAENNAKASAA
                     QIANVEQAVETAQNIAKQVEAKLATLRITAGNSEAILNAEALKLCQENGANCEHLQAH
                     ADTDSSNIQQSDWVSQYANTALSELSAQANSALQIGQDLDRQLFAKHDKFHVWSSIEH
                     QKTEHQSDLYRPYEQQTNLTQLGIELPLANGINAGVMLSRNHANAEFDEGVNGKSNLL
                     MASLYGKWHSENGTFVSLDGSYGKAKNRIDLFGENRFNRHIMAIGANLGHNFDLAGVQ
                     VQPAVGTRYYRFSAQNYKLGEVEVRSPKAHFMAYQAGVKVSKAFDLSSWKVEPSLAAH
                     YVDASSKRLSVAVNDNTFSQRFGRYLKTEVGVGVTKGQWQLSSHLGLLKGNEIGKQHF
                     AGFKLGYSW"
     gene            complement(25022..26131)
                     /gene="mobA"
                     /locus_tag="PXF40_000782"
     CDS             complement(25022..26131)
                     /gene="mobA"
                     /locus_tag="PXF40_000782"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5802150.1"
                     /translation="MEEKISAVILAGGLARRMNGAEKGLQLLDQKPLISHLLARLSPQ
                     IEDIWLNINRSVEQYQQLYPELPYYQDSLPDFQGPLSGMLSGFEQIESDYLLFVPCDT
                     PFIPTQLLHKLHTALRINQAQIAYAHDGDRPHPTVALVHRSVAENLRAYLASGERRLL
                     WFFQTQKSVAVDFSAYKAAFRNFNCLEDLTAFNPYPIKTLAITGYSGTGKTTLLEKLI
                     PKLTACGIRVGLIKHSHHNVDIDKKGKDSYRLREAGANPTMVVCDERWALMTETKQAA
                     ETKQAVEFSQLIAKFDPETVDLVLVEGFKHETMPKIQLHRKEIEKPLPALDQWTIATA
                     TDYPLERENRLDINDVEQLADFIRQWLEASKEPAN"
     gene            26223..26492
                     /locus_tag="PXF40_000783"
     CDS             26223..26492
                     /locus_tag="PXF40_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HDL5802151.1"
                     /translation="MKCKRLEELLELLGEHWRKNPDLHLIDILQQLSVEVSEPDNFHA
                     LRDEVLIYQLKMRNADKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            26536..27174
                     /locus_tag="PXF40_000784"
     CDS             26536..27174
                     /locus_tag="PXF40_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5802152.1"
                     /translation="MKKFALKTVLVALSALFAFNATAVAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELNYKIPSQIKAKLPADSKLVQYHVNFLGRQSENLTRAWAL
                     AMALGAEDKVKTALFEAAQKDAFKSMDDIRAVFIANSISAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFSDSSSTNDFIQRYIDAVVFLSKK"
     gene            27194..27646
                     /locus_tag="PXF40_000785"
     CDS             27194..27646
                     /locus_tag="PXF40_000785"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MsnO8 family LLM class oxidoreductase"
                     /protein_id="HDL5802153.1"
                     /translation="MVLQVLNSKAIQPFLYANSENKMTNLSILNLVPIREGQTAKQAV
                     DSMVKLAKHAENIGIERYWIAEHHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLP
                     NHSPYIVAEQYGTLETLYPNRVELGLGRAPGTDMRTASALRPEFAFPR"
     gene            27630..28292
                     /locus_tag="PXF40_000786"
     CDS             27630..28292
                     /locus_tag="PXF40_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5802154.1"
                     /translation="MPFPDEISELKGYFDGTNPVSAYPAQGLNVPFYILGSSPESAYL
                     AAERGLPYAFASHFAPRFMDDAIRIYRSHFKPSDVLDKPYVILGVNAIVAETDEEATQ
                     LATTQTQFFLNVVTNAQQNLQPPLESDDKVWENFVKAEIVPHFGPVAFEQNALYRQEK
                     TVVRQMTECSLIGSPQSVEQQLKALKARVEIDEIMAVNYIFDEQKQHQSYTWLKQITD
                     KV"
     gene            28294..28587
                     /locus_tag="PXF40_000787"
     CDS             28294..28587
                     /locus_tag="PXF40_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5802155.1"
                     /translation="MSKTMQQKAAEAHNMCRLKGDSMLDNADRQIAFEAVYESEELAQ
                     QAVEFFAQKAKSVETEPCEIQSEITQIAEGFLMKMWITFSCQAEVILFQMAVR"
     gene            complement(28656..29990)
                     /gene="srmB"
                     /locus_tag="PXF40_000788"
     CDS             complement(28656..29990)
                     /gene="srmB"
                     /locus_tag="PXF40_000788"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HDL5802156.1"
                     /translation="MTQLMTFEELDLSPQLLKALAHKGYNRPTAIQQATIPAALEGRD
                     LLGSAPTGTGKTAAFLLPAIQHLLDYPRRKPGAPRILILTPTRELAMQVAEQAQALAK
                     FTQLSIATITGGVAYQNHGEVFNKNQDIVVATPGRLMQYIKEENFDCRAVEVLIFDEA
                     DRMLQMGFGQDAEKIAAETRWRKHTWLFSATLEGELLEDFAERLLNDPIKVDAEPSRR
                     ERKKIQQWYYHADNVEHKTKLLARIISEFSVERAIVFVRRREDVRELSETLRKRGIRS
                     TYLEGEMAQTQRNQAINRLKEGVVNVLVATDVAARGIDIDDIDFVLNYDLPYSADTYL
                     HRIGRTARAGKKGSAISLVEAHDYKLLGKIKRYTEEVLKPRIIEGLEPRTKAPKDGEL
                     NVTSKKEKARIKKKKEAKKEAAKPKVKVRHKDTKNIGKRRKPSSESAAVKQA"
     gene            30150..30413
                     /locus_tag="PXF40_000789"
     CDS             30150..30413
                     /locus_tag="PXF40_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxA family glutaredoxin"
                     /protein_id="HDL5802157.1"
                     /translation="MFVEIYGRLSCPYCVRAKTLAEKMKQELSDFDFKFIDMIAENIS
                     KQDLEPRVGKPVATVPQIFVDNNHVGGCTDFQAFVEEKFGITV"
     gene            complement(30461..30559)
                     /locus_tag="PXF40_000790"
     CDS             complement(30461..30559)
                     /locus_tag="PXF40_000790"
                     /inference="COORDINATES: protein motif:HMM:NF028261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HDL5802158.1"
                     /translation="MSSAAIITMVVAMTIIWGGLLFAIKRLPKEEQ"
     gene            complement(30559..32067)
                     /locus_tag="PXF40_000791"
     CDS             complement(30559..32067)
                     /locus_tag="PXF40_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5802159.1"
                     /translation="MSNQSSNAPQRETFSGRGAFIMAAIGSAVGLGNIWRFPYTTYEN
                     GGGAFILPYIIALLTAGLPLLFLDYSIGHKYRGGAPLAFRRFSSKFETFGWWQVLINV
                     IIGIYYAVVLGWAASYTYFSFSGAWGDKPVDFFIGEFLKMGDITQGVSFEFVGMVTGP
                     LIAVWLIAIAVLAMGIKKGISAASNLLMPQLIVMFLVLVGYSLTLPGAAKGLDALFTP
                     NWEKLADPSVWIAAYGQIFFSLSICFGIMITYASYLKKETDLTGSGLVVGFANSGFEL
                     LAGIGVFAALGFMATAAGQEVNEVAKGGIGLAFFAFPTIINQAPMGALVGVLFFGSLT
                     FAALTSFISVIEVIISAVQDKLNSGRVKATLLVGIPMMVVSVLLFGTTTGLPMLDVMD
                     KFVNQFGIVAVAFVSLIAIVTSEKLSTLEKHLNEVSSFKVGFIWRLCIVITSGVLAFM
                     LFSEIAKVYREGYEGYPSWFVNTFGWGMAIGLVVVAYLLSKMAWKNEPKGDE"
BASE COUNT         9539 a         7153 c         6279 g         9358 t
ORIGIN      
        1 tagcttataa acttcttcaa attgtacatt ttcgagaaaa ttttcgctaa gcccaccatc
       61 ttgattaggc tttctagata tatgccaaaa tccagataaa cgataatacc ctacctgaga
      121 taattttttc tctgcatagc ttttatcatt tatgagcatt cctctagata tgagtagttc
      181 tactaattcg tgatactctt tatgtggttt tgtaggcata aaattgaagg cattttaaga
      241 aaggcaagga cgtagcttga cactctaagt cgattacatt tagtaaacct cagggacagg
      301 ggctacgcca cgattgcaag ggattataca ttttagctga ttaaagtcaa aaggtttcat
      361 caattaataa tagcaatact gtacttttaa ggactataat tgcaaaaaac tgataaaatt
      421 ttaccgcttg ttactgctta cgggccgctt ttacaacacc ttttacactt aatagcttac
      481 ggagaatcag ctcagaatgc tctttatttt ccacagaaat ttgtactctc acttgataga
      541 tatttccttc tcttgcctcg ctattaatgc tgccaatgtt gctatttaat ttggcaagcg
      601 ttgatgtgat ccccgcgagt acccctggtt cattgataat atccagtacg atttccgttt
      661 caaattgaat cgctttttct ttggcaattt cccattccac aggtaaataa ttactcggct
      721 ctgttgcgta atctttcaca ttaccacaac aagcattgtg gattgccaat cctttacctg
      781 aactgacgtg agcaataatt tcatcacccg gtataggtaa gcaacagttt gcaaaactga
      841 taaggcggtt ctcaatccct tcaattttaa gcggttgatt attttctgga ttaccatcag
      901 tatcaattaa tagtggctcc cctaataagc gttgagcgat aacattactc atttggttac
      961 ctagaccaat ttcagccagt agctcatcaa agcttgataa acgtagctcg tctaatacgg
     1021 attgaatagt ttctgaacac aattcatcaa gtgagcgtaa attcattgcc cgaactagct
     1081 gtctacgccc aagtgcaatc gcctcatcgt gctgctgatt tttaagcgat tgacgaattt
     1141 tagccctcgc cttaccactt actacaaaat ttaaccacga tgcatttggg cgcttacctt
     1201 gctcggtaat aatttccacc gtctgtcctg ttcgtagcgg ttctgaaagt ggatacggat
     1261 tgcgatcaac catcgcacct acacaacgat ccccaatgcc tgaatgcacc gcataggcaa
     1321 agtcaatagc ggtagcattc gccggcaatt caacaatacg ccctttcggg gtaaagacga
     1381 aaatatcgtc agagaacaga tccgatttaa cgctatcaat aaattctgct gtattgccgg
     1441 cactgttttg caattcaaca atactttgta gccattgctg ggctttgagt tgaacggtcg
     1501 tgttatggtg cgactcgccc tctttgtaac gccagtgagc tgttaccccc atatccgcca
     1561 ttttgtccat atcttcggtg cgaatctgta cctccaccgg tacaccgtgc gggccaatca
     1621 tcgaagtgtg taaagattga tagccgttcg gttttggcac ggcaatataa tctttcaccc
     1681 gtttcggacg aggcttatac agtgcgtgca tctgccctaa tacacggtaa caattatcta
     1741 cattatcaac cactactcgg aaagcataaa tatctaaaat cgaatgaaaa tgttgatctt
     1801 tctggcgcat tttttggtaa atggaataga gatgtttttc acgcccatac acacgggctt
     1861 caatttgcac ctcttctaac cgaccacgaa tatcatcggc aatgcgttga attagctctt
     1921 tacgatgtcc tctggcactg gcaatagcca ttttcagtac ccgataacgt tgcgggtgca
     1981 ttgcctcgaa gcctaaatct tccaactcgt ttttaatatg ctctattccc aagcgatgtg
     2041 ccaacgggct ataaatctct aaggtttctt tcgctatacg gcggcgttta tccggacgca
     2101 aagcaccaag cgtacgcata ttatgggttc ggtcggcaag tttaattaac acaacccgaa
     2161 tgtctttggt cattgccaaa atcattttac ggaagtttgc cacttctgcc tcttggcggg
     2221 tgcggaattt taatttatcc agcttagaaa cgccttgtac aatatctgct acgctctgtc
     2281 caaattccgc cgccagttct tcttcggtgt aaggtgtatc ttcaatcaca tcgtgcaaca
     2341 aagccgcaat caccgcttct tgatcgagct tcatttccgc aataatcgac gccactgcta
     2401 ccgggtgagt aatatagggc tcaccgctag agcgtgtttg tccctcgtga gcatcacggg
     2461 ctatcacata agcacgtttt acacgctcaa tctgctcggg tggcaaatag ccttgaataa
     2521 ttcgatctaa aggttcaaaa agatacacgt tatacctcaa caacagaaat aaaaatggac
     2581 aacgaatttg caaattttga ggaaaatcct accgcttgca gactcaattg tccattctct
     2641 atttacgaaa aataaaatta cgcttcgttg ctcatttcag ttaaaaatga aatcgcctct
     2701 tgctccgccg cttcttgctt aatagagtcg tgattttcca gctgatccat aatgtcagtt
     2761 gtaattaaac cttcttcaat ttcacgtaat gcaatcacgg tcggcttatc gttttcttca
     2821 ggcacaagtg gctcacgggt gtgaagttgt aattgtcttg cacgacgtgc agcaattaag
     2881 attaaatcaa aacggttgcc aattttctcc gctgcttctt gtacggttac acgagccata
     2941 aatttactcc aaagatttat tcggttttat tcataaaaag attgcgaatt atacagaaat
     3001 tccgccaatt ccgcaatgaa agcgggctaa attcacaaaa tttatttggt attcagtaaa
     3061 atcgccaata attcagcctc aacctctttg ccgaattttc ccattctaaa atcggctttt
     3121 agttgctcga attgctcagg gttcgctgcc attttatctt ttaaaaattg cggaaattca
     3181 gataacacta attctgtttt gccattacga atatcaaaaa tagttggaat tttttgcgca
     3241 gaaatgaccg cttgttgctg ttcatcgctg tcaaaatgtt tgcgttcctg attatctttg
     3301 cgagccacat atttcacctt aatgttagga ttgagctttg ccattcgctg gaaataagcc
     3361 acaatttcca cacaatcggg gcaatatggc tctgccatta ccagccagtc cccttgcacg
     3421 ccaacagctt gcagtttttc ttccgtatct gtggaaagct tgacctccac atacacttct
     3481 aattgatttt cacgatcttc atcgctgtta aattctaaat attcgtaaaa atgtgccata
     3541 attttgtctt ttcctatctc atcttaaatg gatttacgcc ataaaatttc acaatcaact
     3601 ttaacgtcat ctattttctg ttgcgctaac ttttgctgaa ttaattcaaa ggtacgttcg
     3661 gcaatttgtt ggtggtcttg cttaattgaa tgaatatgaa aaggtagtgc attcagtaaa
     3721 tggtgatcat caaaggttgc taaatgcagt tcttgagtca ataatttatc catttgttgg
     3781 tgttcagtca gatagcgcat tactccctca agtagggtaa aagaggctgt gaataccgct
     3841 tctgggagcc tgccaagttt ttcaactatc tgagcgaaca tttgatagcc cgattccggc
     3901 tgatagtctt gatgcagaac ccaattttca tcaagtgcca aatgtgactg ctccaaacct
     3961 tcacggaagc cttttaaacg attttgactt ggcgagagtg aaagttgtcc acctaagtaa
     4021 aaaaactctt ttaagtgata agcccgtaca atattttcca ccaacatact gatactttgt
     4081 gtatcattac tggtgataga agggatattc aacccagaaa tatagcggtc tagctgtaac
     4141 attggggtat attgtgccgc attttgataa taagtcggct cattatgtgt cggagcagta
     4201 atcagtaaat ctacctgtct gtctaataaa cgctctatcg ctttcttctc accttcaaag
     4261 gtatcatccg agcaagcgat cactagctgt aacccgtttt cacggcataa tttctctaag
     4321 gttcttgagg tcagagcaaa gccataattc gttaaatcgg gaatgactaa accgatcaca
     4381 ttcgtgcgtt gagcctgtaa tgattttgca tatacattag cacgataacc gtgtttttta
     4441 gcgatctctt tcactttttg gcaggtttcg gatttgattc taaaatcatt gccccgccca
     4501 tttaaaatca tactgactgt tgttttagat acgccgctga gttccgcaat atcactgagc
     4561 gttaggcgtt ttttagtcac acttatctcc ttttagcata aaaatgggca ttactgccca
     4621 ttgctttatt ctacgctaat tggcaatact tttgctactt tcacttgaat cggacgagag
     4681 ctttttacga cattttcacg cttagcgata aaaaagcgtg aagtcagcac tttttccccg
     4741 ccgtttacga aaatttccac cacagaacgg tcaaagaaaa tctcgattgt ctctaattgt
     4801 tcaattttgc aatgacgaac cgagccaaat ttttccatca attctgtttg ttcggtttgg
     4861 ctacgatcta agctcaacac cccattttca aaacgtaagc tgagcttttg cccctgttca
     4921 ttgctgaaaa aatccaacac aagcggttga ttttccacag aaatttgcaa gtaggcagta
     4981 tccaaattct cgattgcaaa attttctgac atttcgaccg cttgtaattc gcctacattc
     5041 acgattgggt tttgtatcac tttgccgttt tgcagggaaa gtttacgagg caatgtcagc
     5101 attgaatgcc actgatattt atcagttggg taagtgagat caggcaagcc gacccagcca
     5161 aacaaaatgc gatcggaatt ttccaccgtt tgcggtgcgt aaaagtcaaa gccgtagtcc
     5221 agctcttcaa tatgctctgc ccgtaatctg ttgccgttta gctcgccaag tgcgtaagtg
     5281 gcgtggtagt tattttggaa ttgatggctt tcacgcagtt tgccttgtgg cgaccacaca
     5341 aacagatctt taccaccaag tgagaacaga tccggacact cccacataaa cacattgctg
     5401 ttatcaaaat tgtggacttc cagttctgcg attaaacggg gtgtggcatt taaatcgtcc
     5461 atttcataaa ttaacgccgt gccggtcaag ttttcacgct gagcccccaa cacaaaacga
     5521 attttgccct ctgcggtaag gtaaggtttc gggtcacgca cgtgttcggt gtagcctgcc
     5581 ggtgcttggt cgataatgca acgcttttcc aataatttgc ccgatttatc aaaaatcgcg
     5641 atattttggt gaggaatgcg ggcattatct gatgggcggc gtgtattgcc ggtgtaaaaa
     5701 gcgacaatct tatcttgcca taaaatcgcc ccacctgaat aacagccgtg ggattcaaac
     5761 agctcatcgg gaatcagcaa atccccttta ctgaacgttt gaaaatcggt agtgatgaaa
     5821 tgctgccaat gtttcattcc atgtaatgcc ccataaggaa accattgggc gaaaatatgg
     5881 tatttttcac catcgaaaat caagccgttt gggtcattaa ataagcctgt ttcgggagcg
     5941 agatgatagg ttgggtaaaa atcgggatca gataaaacgg tttggcgaag agcgtttaat
     6001 tcgccctcgc tttgtgcgtg caggcttttg tatttgccgt tgttgaaaat gtgcatagag
     6061 tgttcctgtc atttcagaaa ttacgatggt gcaagcgtcc acgcttgtac ccttttgtaa
     6121 aaaatgaggc acaagcgtgg acacttgcgc catcattaca ttattccgcc aaaaatgcgt
     6181 ctaactccgc tttattcggt aatgccgaca tcgccccttt tgctgtggtg gctaacgcac
     6241 cggaagcatt tgctttgcgg atcacttcaa ctaacacagt ttcatcgtgc caattcggcg
     6301 tttgagcaag accggctaat aatccgctga caaaggcatc tccggcaccg gtggtatcca
     6361 caggtttcaa ggctttgccg gcaacgactt ggctttttcc gttgaaatgg tagattgcac
     6421 cgtctttgcc aagggtgata ataatcaatt tctccggata ctgagcggta atagcttgtg
     6481 tggcttgttc caaagtttct gtctcggtta ataaggtcag ctcttcttcg gaaaatttga
     6541 gaatatccgc catcgccacc acagaattta ccactgtttt catttcatca aggctcttcc
     6601 agagcgattc acgcaagttt ggatcaaacg aaacatagcc acccgccttt ttcactcggc
     6661 gaatcccttc aatggtagtg gaacgggatg ggtcgttaat caaggcaata gaacagcagt
     6721 gtaagaaatc accttggtta aattcaggta aatcgccgat ttctaaaaat tggtcggcac
     6781 tcggatttac cataaaagta aaactacgct caccgttatc taagccaaca atcacggtgg
     6841 aagtgcggtg ctgagcgtct aaaatcatct gtttggtgca aacattttct gcctgtaaca
     6901 cttctcgcat aaatttaccc agagggtcgt tacccacacg cccgataaat cctgcctcaa
     6961 cccctaaacg agaaacgcct actgcaacat tcgccggagc accaccggca cattttaaat
     7021 agtgatgttc gccgtcggga attaaatcca ccaccgcatc gcctgttacc caaatcttac
     7081 tcatctcata cacctttaat tagtcacaaa acaccaagct aaaacgattt agcatttatt
     7141 cgattatata ctaaaagacc gcttgtacat acctacaagc ggtcattttt tctttaattt
     7201 ttacagatta accacgtatt tacctacacc taaatcatct tctttacgag tgcgggcaat
     7261 cacgctttct gccgattcca ccacacgtaa tcccatttgg tcttcggtac gaatcacttc
     7321 gccacggagt gagttggtat aaacatcggt gattttcaca tcgacaaatt tgccaatcat
     7381 atccggtgtg ccaacaaagt ttactacacg gttagtttcg gttctgccgg ttaattccat
     7441 caagtctttc ttagacgggc cttcaaccaa aatgcgttgt tctgtaccga gcattgcacg
     7501 gctaaattgc attgcttggt ggttgatgcg ttgttgtaaa cgggataatc gctctttttt
     7561 ctcatcatcg gagacattat caggcagatc tgccgctggt gtacccggtc gagccgagta
     7621 gataaagcta aagctcatat caaagttcac ttgctcgatc actttcattg tttgctcgaa
     7681 atcctctgcg gtttcgcccg ggaagcctac aataaagtcc gaactaattt gaatctcagg
     7741 tcgaacagca cgcaatttac ggataatcgc tttgtattcc aacgctgtgt ggttacgctt
     7801 catcattgtt aatacacggt ctgaaccact ttgaatcggt aaatgtaaga aactgaccaa
     7861 ttcaggtgta tcacgataaa cttcgataat atcatcggta aattcaatcg ggtggctggt
     7921 ggtgtaacgt aagcggtcaa taccgtcaat cgctgccact aagcgtaata attcggcaaa
     7981 ggtacaaatg ccgccatcaa aagtttcacc acggtaagca tttacgtttt gaccgagtaa
     8041 attaacctca cgcacacctt gtgccgcaag ttgggcgatt tcaaataata cgtcatccac
     8101 cgggcgggaa acctcttcgc cacgagtgta aggcacaacg cagaacgaac aatatttatt
     8161 gcagccttcc ataattgaaa cgaatgctgt agggccttcg gcttttggct ccggcaagcg
     8221 gtcaaatttt tcaatttccg ggaaagaaat atcgacaatc gagcttttac cgccacggat
     8281 ttggttgatc atttcaggca aacggtgcaa agtttgtggc ccgaaaacaa tatctacata
     8341 aggggcacga tcacggatat gctccccttc ttgtgaagcc acacaaccgc caacaccgat
     8401 aatcaggttc ggtttatctt ttttccagtt tttccaacgc ccgagttgcg agaatacttt
     8461 ttcttgtgct ttttcacgga tagaacaagt gtttagcagc aacacgtctg catcttcagg
     8521 gttttcagtc agttcaaaac cgtgagtaga gtttaggaga tccgccattt ttgatgagtc
     8581 gtactcattc atttggcagc cccaagtggt aatatgtaat ttagccataa cgtttaaaat
     8641 taataaataa ttcaataact tagaaaagaa aagcgtaaag caatttatta tttttgactt
     8701 aaaataaacc ctttacgcaa aatttgtggc gttattttac cttgttgcct attttttatc
     8761 tataaataat cgccatttat ccgattttac ctaaaacaaa aaagccacga tcttccatcg
     8821 tggcttccag ctaagtagga ggtattattt ggttaaggtt aaaaccacgc tttcaccggc
     8881 aacaacttgg ccatttaatt tagataagtt gctgatttca tccatatttg aaatcacgat
     8941 tggtgttaat actgatttgg ctttgccttc aagtagagct aaatcaaatt taatgatcgg
     9001 ctcgcccact tttacggttt gaccttcctg tgcaaggcga gtaaagcctt cgccttttaa
     9061 ttcaacagta tcaataccga agtgaacaaa taattccacg ccttcttcag attcaatcga
     9121 aaaagcgtgg ttggtttcaa aaattttgcc gatagtccca tttactggag caacgatagt
     9181 gtctccactc gggcgaattg ccacaccgtc acctacaatt ttttcagaga aaacaacatc
     9241 aggcacatct tcaatattta cgatttcacc tgttaatggc gcatagattt tgatttcttg
     9301 actctctttt tgttttgagc cgaataattt atcaaataaa cccatcttaa aatctccctt
     9361 agatattaga tacaaaattc tcgtacattt tatacgagaa ttttgtattt gtatgctaaa
     9421 taattaaaat tagtttaatt tctgataaaa ctcatctact aagcgttcaa tatctgcagc
     9481 agttggctga gcaagcgcct catcagctaa tgctttagca tcggcaaaat taattgagcg
     9541 aatgagtttt ttaacgtgtg gcacagagat accgctcata ctaaattcat ctaatcccat
     9601 accgagcaac aacgcagttg cacgcacgtc accggctaat tcaccacaca tacctgtcca
     9661 tttgccttca gcgtgtgaag catcaataac ttgcttgatt aagtttaaga ctgatgggct
     9721 taatgggtta tataaatgag caataatttc attaccacga tctaccgcaa gtgtatattg
     9781 ggttaagtca ttagtaccaa tactaaagaa gtcggcttct tttgcaagat gacgtgcatt
     9841 taccgctgct gatggggttt ccaccataat acctagtttt aagttctcat caaaagcgtg
     9901 accttctgca cgtaattgat ctttcaattc cgcaacgatg gattttaata aacggatttc
     9961 ttccaccgaa ataatcatcg ggaacattac cgctaaatta ccgaacgcag aagcacgtaa
    10021 taccgcacgt aactgagtat ctaaaatttc acggcgggtg aaaccgatac gcaccgcgcg
    10081 ccaacctaag aatgggttca tttctttcgg taaatcaagg tatggtaact ctttatcacc
    10141 tccgatatcc atcgtacgca gaatgaccat ttgaccattc attgcttcaa caatctcttt
    10201 gtaggcttga aattgctctt cttctcccgg taattgagta cgatccataa acaaaaactc
    10261 agtacggtat aaaccaaccg cttcaccacc gttgcgtaat acaccttcca catcacggat
    10321 agtaccgata ttccctgcca catcaacttt atggccatct aatgtttgag caggcaactc
    10381 ttttaatttg gctaattctt ctttttccgc atttaatttc tcttgtaatg ctttgaaatt
    10441 agcgattttt tcttccgatg gatttaaatg tacttcattg ttcactgcat ctaaaatcag
    10501 aaaatcacca gttttaacta gggaagtaac attgttagta ccaacaatgg caggaagctc
    10561 tagggaacga gccataatag aagtgtgaga agtacgacca ccgacatcgg taataaagcc
    10621 taatacttta tctaaattta attgagctgt ttcggaaggg gttaagtcat aagcgactaa
    10681 aataacttca tcttgaatat caccaagatc tacgatattc atatttaaaa tattgcgtac
    10741 caagcggtta ccaatatcac gaatatcacc tgcacgttct tttaaatatt catcgtcaat
    10801 ttccgcaagc attgaagcct gcatctcaat cactttactt gctgcaacat ccgcagtcac
    10861 aagattatca gtaaggtaac tcaaaatttc ttcttcaagc tcttcatctt ctaagatcat
    10921 caagtggcct tcgaaaatcg cctctttttc ctcacctaat gtacggcgag ctttttcttt
    10981 aatcgcggtt aattgagcag ctgctttttc gcggcctgta aagaattttg ctttttctgc
    11041 ctcaacttcg ctttcagtaa ttttgcgagt atttagtaca atcggctctt cttttaaaac
    11101 caatgctttt ccaaatactg caccagggga agctgcgata cctgtaatca taattgtgtc
    11161 cttaatttaa gatgatgtaa aaatcatctg gatgttacat agcaaaacac tttattgtag
    11221 cttattaagc tacaataaag tgacataaat cttaaatccg agaatagaaa aattattcta
    11281 aagtaggaat caaatcaact aagaaatcaa ctgctttttg ctcatcttcg ccgtccgcag
    11341 aaattgtaat tgttgtgcct tgagtcaaac ctaatgtttg taatttgaat aagctttttg
    11401 cacttgcact tttaccacct gaagtcacag tgatatcaga agcaaaacct ttagctgctt
    11461 ttacaaattc agccgctggg cgagtgtgta aaccatttgg agcggtaata acaacatctt
    11521 ttgagtacat aaaatcttcc tcttaaattt gaaagttaaa aaaatttgtt ttaatccatt
    11581 tattttgcgc acgcaacttt actacaaatt caaattaaaa acacgctaaa aagcgcaaaa
    11641 actcgtcgta tcaccctgct aaatagggtg ttttttaagc taacttaaaa atcatttgtc
    11701 gaatatcaag attctagcac acacttaagc ggaaatgtta caataatttc gctaccactt
    11761 ctttcactta tattctaaat ttggagcaat atgcttagca cattaaccaa aacaaccgca
    11821 tggtttatct actttagtat tattgctctc tatgttttta gtctatgggc gttaatggac
    11881 tatcaccaaa atgatacctt atttgttttt tccgatataa cggccacggt cgcttatagc
    11941 ctacttcaag ccagcctctc tgcggtaatt tcactatttt taggcagcct actggcaaga
    12001 tctttctttt atttggactt taaaggaaaa aatttactct ataaaaccat ttcgtttatc
    12061 tgggcattac cctcactagt aattattttt gcggtaattg gcgtatttgg taactcaggc
    12121 tggctagcca aacttttcca acaactcggt tggaattggc aatttaattt atacggcttg
    12181 cacggcatca ttttggctca ctgcctgttt aacattccgt ttgtgatgaa atattatacc
    12241 ggagggcttc aattgactcc aagcagtcgc tttcagcttg cggctcaatt aaacctaaca
    12301 ggttggaatt atatccaaat tgtggaacta ccgataatca aaactttgct gccttatatg
    12361 tttatgactg tttttctggt ctgctttacc agttttccaa tcgtattaat gttaggcggt
    12421 agcccaaaat acagcacgct tgaagttgcc atttatcaag cggtcacttt tgaatttgat
    12481 tttgcaaaag ccctcatctt aattggggta caatttgtag tgggcattgg cttacaatta
    12541 gtaatgaatt atatctcgac ttctgcactc aaaaagctaa aacagcaacc taaccgagta
    12601 gaaatttgga aaccaaagcc taccggactg gctaaactcg gcttacaagc ggttattttt
    12661 ttgcaaagtt ttgcaataat tctaccgctt gtcagcgtca tttgggcagg actaagcgtg
    12721 tcaaaactca gtgagcgttt gctcaaccct actttatggc aagctactca gtattcttta
    12781 tacttaagtt taattgcttc tatattcgta atcacaatca gctatttgat tgcacttgaa
    12841 gctcgccaat tactctatac aaaagccaag ctcagatata gcattctcac cgcaatcacc
    12901 ctattcccct tacttctgcc gatcttttta ttatcggttg gtttgtttat tttattaatg
    12961 aatagtgaac tctcaagcga ggcattactg ctactggtcg ggatatgcaa cggcttaaca
    13021 ttactgccat ttatttaccc aatgcttttc tccgcaatgt ggaatagcct cacctcgcac
    13081 gacaaattag cacaaggact tgggctaaag gggcttcgcc gttggtggat tgtggaaaaa
    13141 aatcaactaa ttcgaccgct tgttaccgta tttgcgttag caatgtcatc gagcttaggc
    13201 agtttcaccg tcattgcttt tttcggcaac gctgatttca gctcactccc ttatttactc
    13261 taccaacaac ttggtagcta tagaaccgaa gatgctgccg ttaccgcact cattctgatg
    13321 ttatttgcgt tactaccatt cttattcagc aaggataaac tatgatcgaa ctggatctcc
    13381 atttcactta cgaacaaatg aatatgcact ttcagctttc tgtcaaaaaa ggcgaacgta
    13441 ttgcagtggt tggcgaaagt ggcgcaggca aaagcacatt acttaatcta attgccggtt
    13501 ttgaaaaggc agaaagtcag caaagccagc tgtggctaaa tcagaaaaat catcttgata
    13561 ccgaagttgc acaacgtcct gtttcaatgc tattccaaga taacaatatt ttcccgcact
    13621 taacggtaga acaaaacatc ggcttagctt tagtaccaag tttgtcgctc aatccgaaac
    13681 aaaaagcaca ggttaaacaa attgccacac aaatggggat tgaaaccttc cttcagcgtc
    13741 aagccgatca gctatcgggc ggacaaaaac agcgagtggc attagctcgt actttgttgc
    13801 gggataagcc gattttatta ttggacgaac ccttctccgc cctcgacccg caacgccgag
    13861 ccgaattaca gcaaatcgtg tttgacattt gccaaagcag aaatctaacc ctgttaatgg
    13921 taactcacca actatccgaa agcctatttc tatttaatcg ggtgataacg gtagcagatg
    13981 gggagattgt ttctgatctc tcccctcttt agcaaagcag atctgctagg ttctaaatgt
    14041 agggacgcca cgctggcgta cgcaacgatg tcaattccaa caatctaacg gtgaatgatg
    14101 ttccgcacgg atactagcgt tattcatttt tttcagaact cgccccctac tttagcaaag
    14161 aggggaactg taactaatat tacctcccta ttccgctatt ctcttcccca aaatgtgatc
    14221 tacttcacaa atttggaaat attttaaatc ttctcttttt tagctaaacc gatttagtta
    14281 aaatgcaacc gattattttt tatgaaaggt aaattcaaat gaactatcca aaaattgcag
    14341 aacaaacgat tgcaaaatta ggtggcaaag aaaacattac cacacttgcc cactgtgcaa
    14401 cccgtttacg cttaaccatt gctgatgaat ccaaaattga taaagaggcg attgaaaata
    14461 ttgaaggcgt gaaaggtcaa ttctctactc ccggtcaata ccaaattatt tttggatcag
    14521 gcacggtaaa tgaagtgtat gcccaaatgc aaaaacaaat gggtatggca gatatgtcca
    14581 cctctgaagt agcggctgcc ggtgcagcaa atcagccatt actacaacgt ttggtaaaag
    14641 gcttagccga tattttcgtg ccgatcattc cggctattgt ggctggcggt ttgttaatgg
    14701 gtattcactc aatgctaacg gcagtcggtt tcttctggga aggtgaatct gttgttagcc
    14761 gttatccgaa tatttccgat ttagttgatt tcatcaacac tattgctaac gcaccatttg
    14821 tattcttacc tgtattactc ggtttctcag ctacacgcaa atttggcggt aatccattct
    14881 taggtgcggc acttggtatg ttattggttc acccggcact tgcagacggt tggaactatg
    14941 ccaaaacctt aatggaaggt aacatcaaat actggaatat tttcggctta gaaattgaaa
    15001 aagtgggtta tcaaggcacg gttattccaa ctatcgtttc ggcttgggtg ttagcaaccc
    15061 ttgagaaaac tttccgtaaa tttgtgccaa gctatttaga taacttggtg acgccaatga
    15121 tgtcattatt tatcgccggt attttagctt tcactgtaat cggaccattg ggtcgtgaag
    15181 caggttcagc gatttcagca ggcttaacgt ggttatatga cagcttaggc tttatcggtg
    15241 gagcaatttt cggtacattc tacgctccaa tcgtgattac cggtatgcac caaaccttta
    15301 ttgcggttga aacccaatta ttagctgaag tagcacaaac cggcggtaca tttatcttcc
    15361 cgattgcagc aatgtctaac attgcacaag gtgcagcctg tttaggtgta gcttttgcaa
    15421 tgaaagatgc caaagtgcgt ggtttagccg tgccgtcagg tatttcagcc ctgttaggta
    15481 tcaaccggca atgttcggag taaatttacg ctaccgccaa gcctttattg cggcgatgat
    15541 cggttcaggt ttagccagtg catttatcgc tttctttaat gtgaaagcaa ttgccttagg
    15601 tgcagccggt ttcttaggta ttccgtcgat taaacctgac agccttgcaa tgtattctgt
    15661 cggtatggta atttcatttg tagttgcatt taccatttca gccatttggg tgaaaaaagc
    15721 acaagcgaaa taatcaaaaa tagatcacaa aaaagggatt aagtgttagc ttaatccctt
    15781 ttgtttttaa acgccttagc ttaacaatga gtttcgcaag cggtcatttt tcgctaaaaa
    15841 tttgcaaatt agctgttgtg cataattcga gaaatacgcc cttcggcaat ctcttcatca
    15901 cgaattgtca gcacttcaca gccgtctttg gtaactacaa tttgatgctc atattgtgcg
    15961 gagtggctgc ggtctttggt tttcactgtc caaccgtcac ccattaagcg gacttctttt
    16021 ttgccggcat tcaccattgg ctcaatcgta aacaccattc cttcttttaa cactacaccg
    16081 ccatcatcgg tagcataatg cactacttgt gggtcgcaat ggaattcagt accaataccg
    16141 tgtccgcaat attctcgtac taccgaaaag ccttcttttt ccacatattt ttgaatcgct
    16201 gtaccaattt cttttaaacg cacccccgct ttcacggtgc gaatcccgac ataaagggac
    16261 tctagcgtaa ccgccattaa gcgtttatcc cgcacacttg gctcaccgac tacatacatc
    16321 atcgagttat cgccatagta gccatctttg ataaccgtca catcgatgtt taaaatatcg
    16381 ccttttttca gctttttgtc atcacttgga ataccgtgac aaacgacctc atttaacgaa
    16441 atgcacaccg attttgggaa gccgtgatag cccaaactgg ctgaagttgc cccatttgcc
    16501 aaaatgtatt cgtgacaaat tttatctaat tcaccagttg ttacgccctc tttcacataa
    16561 ggggcgatca ttactaaaac atctgaagcc agtttacagg ctactcgtag tttttgaatt
    16621 tcttcttcgt ttcttaatgg aatattattc attacattgc tctctgctat atctgccata
    16681 aaaagtaagg ggattatacc ttttttcagc acaatcccca aacctcagtt tagatttcta
    16741 ctttaaatca agtttcttca taatgaaatt taatatcaca ccataaagcg gtagaaatag
    16801 cagtaggctc acaaagagtt taaacgcata atcgaccgaa ccaatagtaa accaatgctc
    16861 tgccatatat tcatcgctac ttttataaaa ggcgatagca aagaatacaa aagtatcgat
    16921 taaagtacca aaaatggttg aacaggttgg agcaagccac caacgcttac cttgtcttaa
    16981 actattaaat actagaacgt ctaataattg cccaactaaa taagctgcaa agctagccag
    17041 tgcaatacgg aaaacaaaaa agttgaactc agttaatgca ctaaagcctt gaaattgggt
    17101 ttcaaagaat aaaacggaaa tcacatagct tatgacaagt gccggaaaca tcacaacaaa
    17161 aataattttt ctagcaagat ctgcaccaaa tacacgcacg gttaaatcgg tcgctaagaa
    17221 aataaatggg aatgttaacg ttccccaagt tgtcggaaag ctaaattctg ttagtggtac
    17281 ttgaacttca aagctaattt gcactaaata gttgctaatt gcgatgataa aaatatggaa
    17341 aagtgaaagt aaaattagag aacgacgttt gttctcatcc gaaaaataag tagtaaagtt
    17401 catattgtat cctttttcgt taaatgaaaa cttgaggtaa gggaactcaa gggggcatta
    17461 ttctatacat tttcccataa aaatcaagct catattattt caaaaaatga aacaattaat
    17521 ctattaaatt agggtttatc tatttttgac ataaagtaaa atggcacaac ttaacactta
    17581 cataaggaat agataatgtt acaactgaga aaagccaatg aacgaggcga tggttctttt
    17641 agctggctta aaagctacca cactttttcc tttgccaatt attacgacct aaaacatatc
    17701 catttttcac atttacgggt aattaacgaa gatttcattg cacctaatca cggttttggc
    17761 aagcacccgc acgataatat ggaaatttta acttatatgt taaaaggacg tgtggctcac
    17821 gaagacagta tgggtaataa aaccgaagta aaagctggcg aatttcaaat tatgtctgcc
    17881 ggaaccgggg ttttccattc agaaattaat ccagatccga atgaaacctt acacctttac
    17941 cagatttgga ttatcccaaa ccaaaaagat gtgacccctc gctacaacca agatagattt
    18001 gccccgaaag agggagcaac cttgattctt tcgccaaacg cagaagaagg ttcatttaaa
    18061 atttaccaag atatgaagct gtggcgttat caatacccaa cagccaaatc agagcaactg
    18121 gcattagagc caaaccgcag ttactggcta caagtggtga aagggaatct aaacatcaat
    18181 ggcgttgaac tttccaccag cgatgcctta ggcattcgtc aagagaaagc acttgaaata
    18241 aacactcaag atgacgtgga atttttactg tttgatctag tgtaaataca agagacaagc
    18301 ggttaaattt gtaaaaaata ttactaattc agctgcttgc tctcattaaa cattatcgca
    18361 ccaaaattct cactcctagc gtttcatttt gttgaagtaa ggtatttatc cgtgctgttt
    18421 ccacacatac catattttga tacgccgttt ctgtcatcgc actaacggta ttatgccaag
    18481 gattccaaag tacggtttcg gtagcattaa tatgctcaac tttaatggtg cgctgatttg
    18541 caaaatcttg aataaaattc accgcttgtg ccggataaat acaatccaca ttttcactta
    18601 tcttgcgagg tgatggcact tcaatttctt gatttgtcaa tttatcaaaa cattgtgttg
    18661 ctaagccttg tacttccgtt ttcgtaatat caccgacctg aaaataagta tgcaatgcag
    18721 cctgtgccgg ctccggtgct aagtgagtaa aatacaactc acagacttcg cctagtatca
    18781 tctcgagttt tgcctgattt tctaacccca aaacaacacg aatcccatct gctgaggaag
    18841 tatgttccag caaattccac gcttgaatac gggctgtgcc gtgagcaggc tttttgtctg
    18901 taccaaacca agggtggcaa atcggaatgc cgccacgaat cgccacacct gtttggaaag
    18961 gttcaatttc acttaaccat aatacatctt gctgagtatt tttaggttgc caactcagta
    19021 actgcgcacc ttgcaatgca attttagcct tcactttgga gtgattaatc tctaaaacat
    19081 ccaattcatt atattttgct aatgctattt cagggctgat cattttgatt cgtagattat
    19141 tcatcgtatt gctcctcatc ttgaaagata aaatgtgaag tggatcacag aattaaagct
    19201 taaaccgcta cctctttaaa ggtaatcgtt ataataaggg cattctaaca tagcgaagga
    19261 gaaaaaaatg aaaacactcg gcgaatttat tattgaaaaa caagcagaat acccaggggc
    19321 aaaaggggaa ttaagtggga ttttatcttc tattcgttta gccgctaaaa ttattcatcg
    19381 agaaatcaac cgtgccggtt taagtcaaga tattttaggt actgcaggtt ctgaaaatgt
    19441 acagggtgaa gcccaaatga aacttgatgt attcgccaac gaaacgatga aaaaagcgtt
    19501 acttgcacgt gaagatgttg ccggctttgc atcggaagaa gatgataatt ttgttgcctt
    19561 tgataatgag cgtgggagaa atgcaaaata tattttaatg accgatccgc ttgatggctc
    19621 ctccaatatt gaagtgaatg tttctgtggg aacaatcttc tctatttacc gccgtgtctc
    19681 ccctatcggc accccagtaa cacaagaaga tttcttgcag gaagggcgta aacaagttgc
    19741 cgccggttat gttacttatg gttcttcaac catgctggtt tacaccacag gcaatggcgt
    19801 gaacggtttt acctatgatc cgtcattagg cttatttatt ctttcacacc ctgatctaaa
    19861 aacccctacc gaaggaaaat attactccat caatgaaggg cagtatgtta ctttcccaca
    19921 aggtgtgaaa cgctttatta agtattgcca agaaaccgat gaagccatca aacgtccata
    19981 ctcttcacgc tatatcggct cgctggtgtc cgatttccac cgcaatttat taaaaggcgg
    20041 tatttatatt tacccaacct ccaccgtata tccaaaaggg aaattgcgtt tactctatga
    20101 atgcaacccg attgcgtttc ttgccgaaca agccggagga atggcgacag atggtattaa
    20161 tccgatttta gatattaagc caacagagct acaccagcgt gtaccgttct ttgtcggttc
    20221 aacctcaatg gtcaaacaag cgggcgaatt tatgcaagaa tttgcaaaat aatgctcctg
    20281 cttatcactc aataaaactt tcaacaaagc agctgcgtat tccgtagctg cttttgccta
    20341 tcttaagatt gtaaatttgt ataaaaaaca ggtaagacct cttgccaaat aaataattat
    20401 ctatagaata ccccaccttt ttactccatt aatattagca atttattaac attttatgat
    20461 aaataaaaac tttccacttt cttaccttgc cagctttgtg gcatttgctg ttagtttatc
    20521 tgcaacagcc tctgttttca gagatgatat cgatcttcaa tactaccgtg attttgcgga
    20581 gaataagggt aaattcaccg taggtgcaag caatattgaa attaaagata aaagtggcaa
    20641 tacattagat gcactcttcc caaatgtacc gatgccagat tttagtgctg caaaccgtaa
    20701 cttagggata gcaactctag ttgcaccgca atatttagtc agcgttgccc ataatacaca
    20761 atacaatact gtggaatttg gcgccccagg cactaatgcc gatgcacacc actacactta
    20821 caaagtcgtt gatcgtaacg actatggaat tgttgaaggt gggcaacatc aagattatca
    20881 agtgccacgt ctcaataaat tagtcactga ggtcgcacct gcaacagtga ctgatctggg
    20941 taataatgct tcagcctacc aagatagtag tcgttttact cactttgctc gcttaggctc
    21001 tggtcgtcaa atagtcaaaa ataccgagca taaagacaac caaatttcaa catcttacca
    21061 atatttaacc gggggagttc atttaccaat cgcggtacat aattccgatt actggctaga
    21121 ttttagagga aatgcattaa acaatagccc atatggagca ttaactgcat ttggtactcg
    21181 tggtgatagc ggttcaggtg tgtatggcta cgatcagaaa acgaaacgct ggctactact
    21241 ggctacttac acctttggta cgcctgcaaa caactactac aaccgtgccg gtattatccg
    21301 tcaggattat cacgataaac aatttgccga agatattgcc ggcacattaa ccaatgcgca
    21361 acaaaatgcc gtttttgaat ggtctgcaca gggtaaagac agtagcattg gtaataaagg
    21421 gaaaaactta acggtttcgc ttgctgatcg ttcaattaaa gacaatagcg cttctccatt
    21481 aggctatggt ggcacacctc agctacaact tccgcaagat aacaccggaa aaaccctaaa
    21541 cattgaagga caagatagca ctatcgtatt aaaaaccgat attgaccaag gtgctggcgc
    21601 attaaatttc aatgctaatg caacagttcg ccctgaaaat gatcaaagct gggtaggagc
    21661 tggaattgta gtggcaaaag gtaaacaagt taattggcaa gtcaaaaacc cacaaggtga
    21721 ccgtttatct aaattgggcg aagggacact acatattaac ggtaaaggcg aaaaccttgg
    21781 tgacattagt gttggacaag gcactgtcat tttgacccaa caagcgggtg aaaatggcaa
    21841 aaaatctgca tttaaccaag ttggtattgt gagcggccgt tcaaccgttg tattaaacag
    21901 tgctgatcaa gtcgatccaa ataagattta ctttggcttc cgtggtggtc gtttagatct
    21961 caacggcaac aacattgcgt ttaatcgtat tcaaaatagt gatgatggtg cgcgtattgt
    22021 taataatcac ctacaaaaag ctgcaacact caccattaat ggcccgaagc cccctgaagc
    22081 aacggactta aaatggggaa cgtggaaaga aaacagtgct gatatttatg aatatatcaa
    22141 cccacatgct aataaccgta ccgattactt tacgctcaaa ggcaatccaa accaatatat
    22201 gccaacgaat ggcgcaagta atgcccattg gaccttcctg tcttctaaca aggatgcagc
    22261 agtaaaacaa gtactcgcgc aaaaaggtct ggagcatcgc tacaatagct ttaatggttt
    22321 tattggcgaa acagataaca cccagcataa cggtcgtttg aatgtggtgt atgatccaaa
    22381 agcctctaca ccaccggcaa ctgcctctga agtaacttgg ggtaaggggc tagtagctgg
    22441 tgcagatatt tatctgttca ccaatccgaa aacgaaaatt cgggaatact ttgcattaaa
    22501 aggtgatcca aaacaacctg ttcctcgcgg tggcttaagc agcgagcatt gggaattttt
    22561 agctgcagat cgcaatcaag cgatcaacaa agtattagcc cgtaaaaacg caccaataga
    22621 gcaagaaaag ctcaatagta tttatacctt ctctggtggt ttgaacttaa acggcgatct
    22681 aactgtgaaa ggaggtaaag tgctactttc cggcagaccg acccctcacg cttatgatgc
    22741 gatcaataag caagatgtag tttatgccga tgattggcaa aatcgtcaat ttaaggctga
    22801 taatatgcag ctaaaccaat acgctcagct ttatgttggt cgtaatgtct caaacctgca
    22861 agcaaacttg tcagcgaatg accatgctca gctacattta ggctttatca acgagcaaac
    22921 tccaagttgc tactattctg agtacactgg taaaacaagc tgtgatacac aagcggtcgt
    22981 ttctaatgaa atttttgcaa cactgcccac aacacaaatt aatggtgatg tcagcttggc
    23041 agaacagagc caattacaca tcggcaaagc gaacctgatt ggcaccattc aagcagcagc
    23101 aacaacgagc attcgtttag ctaaccaagc aagctggaca aacactgggg atagccgtac
    23161 tggcaattta gtggcagaaa acggttcaac catcaacctg aatgaaaaat ttgtaacagg
    23221 cgagataccg actcgtttta atacgttgat tattgacggt aatttccaag gtaatgccaa
    23281 aatcaactac ttaaccgata ttgctgctgg caaaggcgat cacctacaag taaatggtct
    23341 cgccgagggg actttcactc ttgcattacg caacagtggc aaagaagctg aagtggttag
    23401 cccgttaagt ttattaacct taacccatca ggctcaggct gataaagcta aagtttcact
    23461 ggaaaacggt tatgttgatt taggtgcata tcgttatgtg ctggcaaatc gaagcaacgg
    23521 ctatcgctta tacaatccgt taaaagatgc taaagatcgg aatcagtcga ttgcaacggc
    23581 gaaagcggaa ttagaccatg ctattgcaga agcggataaa caaaaacagg aaatcagccg
    23641 tttgaacgca gaagccgaga aagagcgcca agcagagaaa aatgctaaac aagccgctgc
    23701 aaacgcacaa tctcagctta gccaagcaaa tagcgaatta acccgtttgc aacaatatgc
    23761 tgattactac cgccgttact atccaacgta ttaccgccaa atccaagggc aaattacggt
    23821 agcaaaacag aaagtcacac aagcgagtgc tgcactcact acagcagaaa acaatgctaa
    23881 agcatccgct gcgcaaattg ctaacgtaga acaagcggtt gaaactgcac aaaatattgc
    23941 aaaacaagta gaagcaaaat tagctacctt acgtataact gctggaaata gtgaagcaat
    24001 tttaaacgct gaggcactaa aactttgcca agagaatggt gcaaattgtg agcatctaca
    24061 agcacacgca gacactgaca gtagtaatat tcaacaaagc gactgggtaa gccaatatgc
    24121 caataccgct ctttccgagc tatcggcaca ggcaaattct gcgttgcaaa tcgggcaaga
    24181 cttagatcgc caactgttcg caaaacacga taaattccac gtttggagca gtatcgaaca
    24241 tcaaaaaacc gaacaccaat cggatttata tcgcccgtat gagcaacaaa ccaacctcac
    24301 tcagttaggc atagaattac cgcttgcaaa cggtatcaat gccggtgtga tgctatcccg
    24361 caaccacgct aatgcggaat ttgatgaggg agtgaacggt aaatccaact tactgatggc
    24421 aagcctatat ggtaaatggc attcggaaaa cggcactttc gtcagcctag acggtagcta
    24481 cggtaaagcg aaaaaccgta tcgacctgtt cggggagaac cgctttaacc gtcatattat
    24541 ggcgattggg gcaaatcttg gacataactt cgacttagcc ggcgtacaag ttcagcctgc
    24601 tgttggtaca cgttactatc gcttcagcgc acaaaattac aaactgggtg aagtagaagt
    24661 ccgcagcccg aaagcacact ttatggccta ccaagcaggt gtgaaagtca gcaaggcctt
    24721 tgacctctcc agctggaaag ttgagcctag ccttgccgca cattatgtcg atgccagcag
    24781 caaacgcttg agtgtggcag tcaatgacaa tacctttagc caacgtttcg gacgttatct
    24841 gaaaactgaa gtgggcgtgg gtgttacaaa aggtcaatgg caattaagct ctcaccttgg
    24901 tctattgaaa ggtaacgaaa tcggcaaaca acattttgcc ggcttcaaac tgggatatag
    24961 ctggtaattg ctattagccc ctaaactaag caatcgctta ctttaggggc tttttagtca
    25021 attaattagc cggctctttg cttgcctcta gccactgccg aataaaatca gcaagctgtt
    25081 caacatcatt aatatccaac cgattttccc gctcaagcgg ataatcggtt gcggtcgcga
    25141 ttgtccactg gtctaacgcc ggcaacggtt tttcaatttc tttacggtgt agttgaattt
    25201 tcggcattgt ttcgtgctta aagccttcca ctaaaactaa atctaccgtc tctgggtcaa
    25261 attttgcaat taattgtgaa aattcgaccg cttgtttagt ttctgctgcc tgcttagttt
    25321 ccgtcattaa tgcccaacgt tcatcacaca cgaccatagt cgggtttgct cctgcttctc
    25381 gcaagcgata gctgtctttt ccttttttat caatatcaac attgtggtgg gaatgcttaa
    25441 tcaagccaac ccgaataccg caagcggtca attttgggat taatttttcc aataaggtgg
    25501 ttttgcctgt gccgctatag ccagtaatcg ccagggtttt gatgggatat ggattgaaag
    25561 ccgttaaatc ttctaaacaa ttaaaattgc gaaatgcggc tttatatgcc gagaaatcca
    25621 ctgccacact tttttgggtt tgaaaaaacc acaataatcg gcgttcgccg gaggctaaat
    25681 acgctcttaa attttccgcc accgaacgat gcaccaaggc aaccgttggg tgtgggcggt
    25741 cgccatcgtg agcataggca atttgagcct gattaatgcg taatgccgtg tgtaacttgt
    25801 gcaatagttg ggttggaata aacggcgtgt cacaaggcac aaacagtaaa tagtcgctct
    25861 caatctgctc gaacccggaa agcattccac ttagtgggcc ttgaaaatcg ggcaagctgt
    25921 cttggtaata aggtaattca gggtaaagtt gttgatattg ttccaccgaa cgattgatat
    25981 tgagccaaat atcctcgatt tgtggcgaaa gtcgggctaa caggtgcgaa atcaacggtt
    26041 tttgatctaa cagttgcaac cctttttccg ctccattcat tcgccgagcc aaacctccgg
    26101 ctaaaattac cgctgaaatt ttctcttcca tttccctctc caaacctgaa tttttttgcc
    26161 aaatgagggc taaaagtata ttattccgct tactattcaa caagtttttt aagaggcata
    26221 ctatgaaatg caaacgttta gaagagctat tggaactgct tggcgaacat tggcggaaaa
    26281 accccgatct tcacttaatt gatattctgc aacagctttc ggtggaagta agcgagccgg
    26341 ataattttca tgccctgcgt gacgaggttt tgatttatca gctcaaaatg cgaaacgccg
    26401 ataaatttga gccgattccg ggcattaaaa aagattatga agatgatttt aaaaccgcat
    26461 tgctccgagc tcgtggaatt ttaaacgatt aagtttgtct tatttctcac ttatcatatt
    26521 tttgaaggaa tcattatgaa aaaatttgca ttaaaaaccg tactggttgc tctttctgcc
    26581 ctttttgcat ttaacgcaac cgcagttgca gcagatccaa ctgccggcaa agagtatatt
    26641 gaggtgcgta aagccccatc ggctcaaaaa gaagtggtgg aatttttctc attctactgc
    26701 ccccactgtt acgattttga gctaaattac aaaattccaa gccaaatcaa agcgaaattg
    26761 cctgcagaca gcaaattagt gcaatatcac gtcaatttct taggtcgcca atctgaaaac
    26821 ttaacccgtg cttgggcatt ggcaatggca ttaggagcgg aagataaagt aaaaaccgcc
    26881 ttgtttgaag ccgctcaaaa agatgcgttt aaatcaatgg acgatattcg tgcggtcttc
    26941 atcgctaaca gcattagtgc agaacagttt gacagcggta tcaacagctt tgcagtaaac
    27001 ggtttagtca ataaacaagt tcaattagct gaagacttcc aaattcgtgg tgtaccggcg
    27061 tttttcgtga atggtcaata ccagcttaat ctagaaggat tttccgattc aagctcgacc
    27121 aatgatttta tccaacgcta tattgacgct gtggtcttct tgagtaagaa ataatcgtcc
    27181 ccatattaag gagatggttt tacaagtgct gaatagtaaa gctattcagc cttttttata
    27241 tgcaaactcg gagaacaaaa tgacaaactt atccattctc aaccttgtgc cgattcgtga
    27301 agggcaaact gccaaacaag cggtcgattc tatggtgaaa ttagcaaaac acgcagaaaa
    27361 tatcggcatt gaacgctatt ggattgccga acaccataat atgaaaaatc ttgccagttc
    27421 cgccacgcaa ttattgattc aacacgccct ctcccacacc gaaaaattaa gagtcggctc
    27481 cggtggcgtg atgttaccca accacagccc ttatattgtg gcagaacaat acggcacgct
    27541 tgaaacactc tacccaaacc gagtagaact ggggcttggg cgagcccccg gcaccgatat
    27601 gcgaaccgcc tctgccttac gcccagagtt tgcctttccc cgatgaaatc agcgaattaa
    27661 aaggctactt tgacggtaca aaccctgttt ccgcctatcc ggcacaaggg ctaaatgtgc
    27721 cgttttatat tctaggctca agccctgaaa gtgcctattt agcggctgaa cgaggcttgc
    27781 cttacgcctt cgcttcacac tttgcccctc gctttatgga cgatgcaatc cgcatttacc
    27841 gctcacattt taagccctct gatgtgttag ataaacctta tgtgatttta ggtgtgaatg
    27901 ccattgtggc agaaaccgat gaagaagcaa cacaactggc gaccacccaa acccagtttt
    27961 tcttaaatgt agtgaccaat gcccaacaaa atctgcaacc accgctcgaa tctgacgaca
    28021 aagtgtggga aaattttgtg aaagcagaaa ttgtgccgca tttcgggccg gttgcctttg
    28081 agcaaaatgc tctataccga caagagaaaa ccgttgtccg ccaaatgacc gaatgctcct
    28141 taattggtag cccgcaaagc gttgaacaac aacttaaagc cctaaaagca cgagtggaaa
    28201 ttgatgaaat tatggcggta aactacattt tcgatgagca aaaacagcat caatcctaca
    28261 cttggttaaa acaaattacg gataaggtgt aatatgagca aaacgatgca acaaaaagcg
    28321 gctgaggcac ataatatgtg ccggctaaaa ggcgattcta tgttggataa tgcagaccgc
    28381 caaattgcct ttgaagcggt gtatgagagc gaagaactgg ctcaacaagc ggtcgaattt
    28441 ttcgcacaaa aagcaaaatc ggtcgaaacc gaaccttgtg aaattcaaag cgaaattaca
    28501 caaattgcag aagggtttct gatgaaaatg tggatcactt tcagctgcca agcagaagtg
    28561 attctgttcc aaatggcagt aaggtagata taaacaagcg gttatttttg atgaaatttt
    28621 tgcaaaaaat cttcagaaaa taaccgcttg tatcattatg cctgtttaac cgcagccgat
    28681 tcactacttg gtttacgccg tttaccgata tttttggtat ctttgtggcg gacttttact
    28741 tttggttttg ccgcttcttt tttcgcctct tttttcttct taatgcgtgc tttttctttc
    28801 ttgctggtca catttagctc gccatctttc ggggctttgg tgcgaggctc taagccctcg
    28861 ataatgcgag gttttagtac ttcttcggtg taacgtttaa ttttgccgag taatttataa
    28921 tcgtgagctt ccaccaatga aattgccgaa ccttttttgc cagcacgagc ggtacgccca
    28981 atacggtgca agtaagtatc cgcactataa ggtaaatcgt agttcagcac gaaatcaata
    29041 tcgtctatat caatgcctcg agccgccaca tcggttgcca ctaacacatt cactacgcct
    29101 tcttttaaac ggttaatagc ttggttacgt tgggtctgag ccatttcacc ttcgagataa
    29161 gtagaacgaa ttccccgctt acgcaaggtt tcgctgagtt ctcgcacatc ttctcggcgg
    29221 cggacaaaca caatcgctct ttccaccgaa aattcgctga taatacgagc taataatttg
    29281 gttttatgct ctacattatc ggcgtggtaa taccattgct gaattttttt acgctcacgg
    29341 cgacttggtt cggcatcgac tttaatcgga tcatttaata atcgctcggc aaaatcctct
    29401 aataactcgc cctcgagggt cgctgaaaac aaccaagtat gcttacgcca acgggtttct
    29461 gccgcaattt tctccgcatc ttgcccgaag cccatttgca acattctatc tgcttcatca
    29521 aaaatcagca cttccaccgc tcggcagtca aaattttcct ctttaatgta ttgcattaaa
    29581 cgacccgggg tagcaaccac aatatcttga tttttattaa agacttcacc gtgattttga
    29641 tacgccaccc caccggtaat agtcgcaatg ctcaactgag taaatttagc cagtgcttgg
    29701 gcttgctccg ccacctgcat tgccagctct cgggttgggg taagaattaa aatgcgagga
    29761 gcccctggtt tgcggcgagg ataatctaat aaatgctgaa ttgccggcag taaaaaagcg
    29821 gcggttttgc cggtaccggt aggggctgaa ccgagcagat cacgtccttc taacgcagcc
    29881 ggaatcgtgg cttgttgaat agcggttggg cggttatagc ctttgtgtgc taaggcttta
    29941 agtaattgag ggcttaaatc aagctcctca aacgtcatta attgggtcat ctctgtttct
    30001 ctacttgtaa atttgcccca gtatatcaca ttaactgctt gccgtgatgg tgaagaaatt
    30061 tatcctaaaa ggttgaaaaa attgttacac ttacacagag ccgtttaacg gacaattcgc
    30121 tcacttttac tttatagaag gaacattata tgtttgttga aatttatgga cgtttatctt
    30181 gcccatactg cgtgcgtgca aaaacattag ccgagaaaat gaaacaagaa ttaagcgatt
    30241 ttgattttaa atttattgat atgatcgctg aaaatatttc aaaacaagac ctagagcctc
    30301 gtgttggcaa gccggttgca actgtaccac aaatttttgt ggataataac cacgttggcg
    30361 gttgcaccga tttccaagcc tttgtggaag agaaatttgg gattaccgta tagccaaaag
    30421 cccgctaaca agcgggcttt tttatacaaa aatttgcaaa ttattgttct tctttcggca
    30481 gacgtttaat cgcaaaaagt aaaccgcccc agataatcgt cattgccacc accatggtaa
    30541 taattgctgc tgaactcatt actcatctcc ttttggttca tttttccacg ccatttttga
    30601 tagcaaataa gccaccacca ctaagccgat tgccattccc cagccgaagg tgtttacaaa
    30661 ccagcttggg tagccttcat aaccttcacg atacactttg gcgatttcgc tgaataacat
    30721 aaatgccagt acgccggagg taataacgat acataaacgc cagataaagc cgactttgaa
    30781 tgaagaaact tcgttcaggt gtttttcaag ggtgcttaat ttctcgctgg tgacaatcgc
    30841 aatcaaggaa acaaacgcca ccgcaacaat accgaattgg tttacgaatt tatccatcac
    30901 atcaagcatt ggtaaaccgg tggttgtacc gaatagcaag acagatacca ccatcatcgg
    30961 aatgccgact agtagcgtgg ctttcacacg acctgaattg agtttgtctt gcaccgctga
    31021 aataatcact tcaattaccg agataaatga ggttaatgcc gcaaaggtga gtgaaccaaa
    31081 gaacagcacg ccaactaatg cccccattgg tgcttggtta ataatggttg ggaaagcgaa
    31141 gaatgccaag ccgataccgc cttttgctac ctcgttcact tcttgccctg cagccgttgc
    31201 cataaagccg agtgccgcaa atacgccaat acccgctaat aattcaaaac cactgttcgc
    31261 aaaacccacc actaagcctg aaccggttaa atcggtttct tttttcaggt atgaagcata
    31321 ggtaatcata atcccgaagc agatagagag tgagaagaag atttgaccgt aagcggcaat
    31381 ccacacactt ggatcagcca atttttccca gtttggggta aataacgcat ctaagccttt
    31441 cgcagcaccc ggtagggtta atgaatagcc gaccaacact aagaacatca cgatcaactg
    31501 cggcattagc aggtttgagg cagcagaaat cccttttttg atccccatag ccaacacagc
    31561 aatagcaatc agccataccg caattaacgg ccctgtaacc ataccgacaa attcaaagct
    31621 cacgccttga gtaatatcgc ccatttttaa gaattcaccg ataaagaaat ccaccggttt
    31681 atcgccccac gctccgctga atgagaagta ggtgtaactt gctgcccagc cgagtaccac
    31741 cgcataataa atcccgatga tcacgttgat cagcacttgc caccaaccga aggtttcaaa
    31801 tttcgagctg aaacggcgga aagcgagcgg tgcaccacca cgatatttat gcccgataga
    31861 ataatctaag aacagcagcg gtaaacctgc ggtcaaaagg gcaatgatat acggcagaat
    31921 aaaagcccca ccgccgtttt cataagtagt ataagggaaa cgccagatgt tccctaagcc
    31981 gacagcggaa ccaatagccg ccataataaa tgcaccacgt ccggagaacg tttctctttg
    32041 cggtgcgttt gatgattgat tagacacggt aaatacctca aactgataaa gttttatata
    32101 aaaaagaatt gagttaaatg taaattaatc acactttaag tgcggaatat gcccaatttc
    32161 aggttgaatg taaagtagaa aaatatagaa aaacagataa aaaacgctca attttcaata
    32221 taaaactcca aataaaaaca aaaattcaaa caaaaaaact aaaaacaaga catcttcagt
    32281 taaatataaa taaaaaccta aaagctacca gcataattat ttatattaa
//
LOCUS       DANMCL010000019        31582 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.019, whole genome shotgun sequence.
ACCESSION   DANMCL010000019 DANMCL010000000
VERSION     DANMCL010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 31582)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31582)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31582
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.019"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(256..438)
                     /locus_tag="PXF40_000792"
     CDS             complement(256..438)
                     /locus_tag="PXF40_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802160.1"
                     /translation="MYQFGYLRTKIGTDTQRAMLWNCPTYVLIIPFLLNTSVKKQYHA
                     FWQKYHQHNNDVSFPY"
     gene            588..1628
                     /gene="selD"
                     /locus_tag="PXF40_000793"
     CDS             588..1628
                     /gene="selD"
                     /locus_tag="PXF40_000793"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020909986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:633..635,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HDL5802161.1"
                     /translation="MSEPIKLTQFSHGAGUGCKISPKVLGTILQTQLEQFVDPNLLVG
                     NETADDAAVYDLGNGQAIISTTDFFMPIVDAPFDFGRIAAANAISDIYAMGGKPIMAI
                     AILGFPVNKLPAEVAQQIVEGGRFACQQAGIALAGGHSIDSPDPIFGLAVTGIVPTER
                     VKRNASAVAGCELFLTKPLGIGILTTAEKKGLLKPEHQHLASEVMCQINLIGSAFSEL
                     PEVTAMTDVTGFGLLGHLSEVCQGSGLRAEVDFEDIQVLDGTKEYIALGAVPGGTNRN
                     FDSYGHLISAMTDEQKAILCDPQTSGGLLVAVLPQAVEKVQQIANRANVPLFHVGRLL
                     EMEQGKPRIEVI"
     gene            1628..2101
                     /locus_tag="PXF40_000794"
     CDS             1628..2101
                     /locus_tag="PXF40_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HDL5802162.1"
                     /translation="MFKPNVTMACVVHCKGKFLFVEEIEYGKRTLNQPAGHLEKDETL
                     LEGASRELFEETGIRAEMANLVKIYQWQAPRSQTDFLRFLFSVELEEWLEPNPQDADI
                     TQALWLTLAEFEDYIQQQGQCARSPLVVQSVKDYLSGERYPLSLLNAFEWARNGK"
     gene            2091..3299
                     /gene="ubiH"
                     /locus_tag="PXF40_000795"
                     /gene_synonym="visB"
     CDS             2091..3299
                     /gene="ubiH"
                     /locus_tag="PXF40_000795"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HDL5802163.1"
                     /translation="MENKTTTQFDVVIVGGAVTGSVLALALSSFTHHKISIAIVEKSL
                     PDYEQQGGFDARSIALAEGSLQKMGQIRPLAGSSLGEMISEIGTPIQQIQVADKGHFG
                     KTTLKASEQNVAQLGMVVELAKFGRKLTACLAQQANITLFCPNQVVGIERSQQHCGLS
                     LKNGEKLSCSLLVAADGIQSQIAKQCGVETVKVRDYAQSAIIANVELSESHQNQAFEY
                     FTPQGPFALLPLSGNMMSLVWCVKEPNELIQLSDSEFLARLQQQFGWKLGQFVRVSKR
                     FVYPLILQKAQSHIHHRLAVVGNAAQMLHPVAGQGFNLGLRDLTTLAELVALAFNQGK
                     DIGEFSLLSTFENERTQDQARMINATSGLISLFCCEMLPVQVVRNLGLLTVSHSKIAR
                     DFVANQALGW"
     gene            3562..4794
                     /locus_tag="PXF40_000796"
     CDS             3562..4794
                     /locus_tag="PXF40_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HDL5802164.1"
                     /translation="MTTENMSTPKQAFIGLQMLFVAFGALVLVPLITGLDPNVALLTA
                     GVGTLIFQICTKRQVPVFLASSFAFIAPIQFGVQQWGIPVTMGALLCSGFIYMALSAL
                     VKAKGVNILHKYFPPIVIGPVIMVIGLGLAPVAVDMATGKSANIAYNTAIIVSMITLV
                     TTLIVAVFAKGLLKLVPILAGLTVGYILSVFMGLVDFTKVVEAPWFSLPKVSAPEFKL
                     DAILYLLPIALAPAVEHLGDVMAISQVAGKDFMKKPGLHRTLLGDGLATSAAAALGGP
                     PNTTYSEVTGAVMLTKNFNPKIMTWAACWAIAFSFCGKIGAFLATIPTFVMGGIMMLL
                     FGAVAVVGINTLIKAKVDLSIPRNLCIASVVMTFGIGGMLINIGEFSLKGISLCALVA
                     IVLNIVLPKEKVEDSAAH"
     gene            4861..5847
                     /locus_tag="PXF40_000797"
     CDS             4861..5847
                     /locus_tag="PXF40_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5802165.1"
                     /translation="MQKLTFSPPLLNTPCPWCSELESLRELYACEYTGAVTTRTSMPQ
                     PYPHDWAKNQYVLFDSNAQKTASVNTQDATSLQTASLNTIGLSPNNLDTTISFVRTIS
                     NELTAPSSKPFIISVFGSPEEVGECYEKIVAFQTEVKMPLAMEINISCPNIPGEISPA
                     YSAEELSHYLHALQTSLKKLAQGDNTLPIGIKIPPFTYQNQYDELIKGLLQAVENGEN
                     LPISFITSTNTLGSSLVLNAGKAVLNSEVGTGVGGMAGTAIHALSLGNVYTIRQMLDQ
                     EPKLKHLQIIGVGGVNDKAGFERMKSVGADFVGLATALGVKGIGVFKEILSE"
     gene            complement(5888..6298)
                     /locus_tag="PXF40_000798"
     CDS             complement(5888..6298)
                     /locus_tag="PXF40_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HDL5802166.1"
                     /translation="MLYSVLTAHILLNEPYRNGAHSTQHEHLVVMFEIDEESGYFYAM
                     DLHQTEQPVVDSLFVFRVSDIEQNSLKEPRRLEICWSEDGYQAFLLINGYPHAVFDFR
                     QFVGYNHTKFPMPELGSMWVHKETTNELVEKWLG"
     gene            complement(6364..7674)
                     /gene="eno"
                     /locus_tag="PXF40_000799"
     CDS             complement(6364..7674)
                     /gene="eno"
                     /locus_tag="PXF40_000799"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HDL5802167.1"
                     /translation="MAKIVKVIGREIIDSRGNPTVEAEVHLEGGFVGLAAAPSGASTG
                     SREALELRDGDKGRFLGKGVLKAVSAVNNEIANALVGKDGSAQAEIDQIMIDLDGTEN
                     KSKFGANAILAVSLATAKAAAASKGLPLYAYIAELNGTPGVYSMPLPMMNIINGGEHA
                     DNNVDIQEFMIQPVGASTLKEALRIGAEVFHNLAKVLKAKGLNTAVGDEGGFAPNLAS
                     NADALACIKEAVEKAGYVLGKDVTLAMDCASSEFYDKERNVYDMKGEGKTFTSQEFTH
                     YLEGLCKEYPIVSIEDGQDESDWEGFAYQTKVLGDKVQLVGDDLFVTNTKILKNGIEK
                     GIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQ
                     IKTGSMSRSDRVAKYNQLIRIEEALERAGTPAPFNGRKEIKGQA"
     gene            complement(7865..9043)
                     /gene="rlmC"
                     /locus_tag="PXF40_000800"
     CDS             complement(7865..9043)
                     /gene="rlmC"
                     /locus_tag="PXF40_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HDL5802168.1"
                     /translation="MSSLLHCSHFERGDCTSCQWIEKPYSTQLAAKEADLKRLILPFI
                     LQNKTEILPLVGSPISQFRNKAKMVVSGSVERPILGILKDQNDAQSGVDLTDCLLYPS
                     SFHRLFPILKDFIARAGLVPYNISKKKGELKYILITESQYNQSFMLRFVVRSEAKRAL
                     VERELPELLEKLPPNSVVSLNIQPQHAALLEGETEIFLTEQKVLEEHFNGIPLFIRPQ
                     GFFQTNPVVASQLYHTAQSWIEHLPIAKLWDLFCGVGGFGLHCANALQAKNSNVELTG
                     IEISASAIASATKSAEKLGLKQVKFASLDSAQFALNEAGSPPDLVIVNPPRRGIGKLL
                     AEFLNQLGSPYLIYSSCNAVSMANDFTFLTNYELHKVQLFDMFAHTAHYETLTFLVKK
                     "
     gene            complement(9036..10073)
                     /gene="nagZ"
                     /locus_tag="PXF40_000801"
     CDS             complement(9036..10073)
                     /gene="nagZ"
                     /locus_tag="PXF40_000801"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HDL5802169.1"
                     /translation="MLLIDIKDKELTQEEVEMLEHPLVSGLILFTRNFYDKAQIQALV
                     KSIRQRVKKPLLITVDQEGGRVQRFREGFTKLPAMQSFNQLATTPEQAMQLAKETGWL
                     MAAEMFALDIDLSFAPVLDLGHECKAIGDRSFGQEPAAILPVAEAFIDGMREIGMATT
                     GKHFPGHGHVLADSHLETPFDDRPKERIFNHDILPFKQLIAKGKLSAIMPAHVVYTQC
                     DSQPASGSSYWLKEVLRKQLNFNGVIFSDDLGMKGAGFMGNFVERSEKAIQAGCDLLL
                     LCNEPEGLVQVLDGLKYQPTQAQKERRLSLMKRKTVTWRELENSSRYQQTQAELTALQ
                     NNWLEWKEANV"
     gene            complement(10199..10930)
                     /locus_tag="PXF40_000802"
     CDS             complement(10199..10930)
                     /locus_tag="PXF40_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HDL5802170.1"
                     /translation="MFDWITNPEAWVALFTLTGLEIVLGIDNIIVISILVSRLPIEQR
                     QSARIIGLGLAMGTRILLLLSLAWMMRLVEPLFTIGNNPISGRDLILLIGGLFLIVKS
                     AMELKESISAESHEEKSESIKKASFFMVLIQIAIFDIIFSLDSVITAVAMADDIPVMV
                     IAIIIAVAVMMLAAKTIGDFVDNNPTIKNLALAFLILIGIVLVGEGFDIHIPKAAVYT
                     AMGFSVVVEMLNIKMRRNQAKLEQA"
     gene            complement(11019..11699)
                     /gene="mutH"
                     /locus_tag="PXF40_000803"
     CDS             complement(11019..11699)
                     /gene="mutH"
                     /locus_tag="PXF40_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HDL5802171.1"
                     /translation="MQLSTFSPTEQALLSKAEWLAGFTLGEIAEMLHIPIPADLKRDK
                     GWVGTLIETALGAKAGSKAEQDFAHLGIELKTIPVNQKGLPLETTFVSLAPLTQNNGI
                     IWETSHVKHKLSRVLWIPVEGERKIPLAERHIGQPILWSPTITQESRLQQDWEELMEL
                     IVLGELHKINATLGEVLQLRPKGRNNRSITSAINAKGEIVQSLPLGFYLRKHFTAEIL
                     QNFLHCPL"
     gene            complement(11791..12426)
                     /gene="lexA"
                     /locus_tag="PXF40_000804"
     CDS             complement(11791..12426)
                     /gene="lexA"
                     /locus_tag="PXF40_000804"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HDL5802172.1"
                     /translation="MRKHLTARQQEIFDFVKNHIETTGMPPTRVEIAREIGFKSPNAA
                     EEHLKALARKGYIEMLSGTSRGIRILVEDENQAANDEDEGLPLIGKVAAGTPILAVEH
                     VENHYPVNGAMFNPSADYLLKVNGNSMEKIGILDGDLLAVHKTNTARNGQVVVARVND
                     EVTVKRLEKKGELIYLHPENDELKPIVVNPAQEYIEIEGIAVGVIRSNAWM"
     gene            12593..15028
                     /gene="plsB"
                     /locus_tag="PXF40_000805"
     CDS             12593..15028
                     /gene="plsB"
                     /locus_tag="PXF40_000805"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HDL5802173.1"
                     /translation="MSGLLNFYRAFLNLPLSLLVKSRSIPTHPVAELELNLEQPIVYV
                     LPYTSQTDLLILQKNCLALNLPDPLQENVIEGQTLLRFVFLDEGRRFFKSKGAKSETE
                     SIFYRYLDLHRANAELDVQLVPVSVLWGRAPGKEDARHLQVLTSFQRFLSMVWFGRDN
                     FVRFSPAVSLRYMVTEYGADEKIAQKIARVAKMHFAKLRYSAMGPRLPNRDAMFNKIL
                     NSEVIQAAIAEEAKKSSPEKARKEAEKIINEIAADVKHESLRVADRVLSWLWNKLYQG
                     INVQNADRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFWP
                     AGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEP
                     KTGMMSMSLQALQRGLNRSLSIVPVYIGYEHVLEVDTYAKELRGAAKEKENAGLVLRV
                     LKKLKNLGQGYVNFGEPILVNNYLNQYFPEWKEPSEDGRPKWLNEAVDNISHQVMVNI
                     NKAAAVNAKNLVGSALLASRQRALTREQLIEQLGSYIQLFRNVPYSKDMTLPTESAEV
                     MLNHVIHLPRSGVLIEKDNFGELVRLERESAVLMTYYRNNVQHLFVLPSLVASMVLHH
                     EAVSKDVVIKSVNRIYPFLQAELFLHFKQEELKAHIEAIIAELSRQGVIKNESDMLMI
                     NRSHIRTLQLHSAGVREILQRYYISLSVLLEQPNISRGYLEKESSSIAQRLSVLHGIN
                     APEFFDKAIFSTFTSSLKAQGYFDGDDNLAIAKVKETESLLRSLISIEVQQTIQGAMA
                     KVAESVENPNIAG"
     gene            complement(15133..15696)
                     /locus_tag="PXF40_000806"
     CDS             complement(15133..15696)
                     /locus_tag="PXF40_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HDL5802174.1"
                     /translation="MSAPNSGTNPAPLGLCGFALTTFLLSLINNGTFSGENVGLVLAM
                     GFAFGGTSQMIAGMFEFAKGNTFGFTAFTSYGAFWWSFALFKVFFAANVSAEFVGWYL
                     VAWGTFTLMMFIGTLAKARALQAIFLSLTITFYLLAAGDFTHNTTLTNIGGNFGLLTA
                     FLAFYLAAADIINESFGKTVLPIGEPK"
     gene            complement(15894..16790)
                     /locus_tag="PXF40_000807"
     CDS             complement(15894..16790)
                     /locus_tag="PXF40_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5802175.1"
                     /translation="MDILDRLLAFAQISAGISVKCQLQGDWQLENPHQTGQAIAHIIS
                     YGQAYLQHNGKTHHLKQGDIVFFPRFADHTLRSQIQPLTSKNAVNPEQLGAFTLTQAG
                     LSQSECDMFCLHFYYDHQAELMESLPEMIVFQVAETPLKAMLDILKQEAETPNLAVKS
                     VVNSLAVVILTMILREHLVNHNNQLFGILKGWQDLHLRPLIKAILLNPEHEWQVDDMA
                     AFIHLSRAQLVRLFNKHLCISPHAFVHKIRLQKAAMLLKSQAGSVLSIALSCGFQSES
                     HFITAFKKQYCVTPSQYRQLNP"
     gene            16926..17267
                     /locus_tag="PXF40_000808"
     CDS             16926..17267
                     /locus_tag="PXF40_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5802176.1"
                     /translation="MSSFQNWTEHTAHVKQSFGKLGQKHPKMLEAYKALGTAAAAEAL
                     DHKTRELIALAVAITTRCESCISVHAEEAAKAGATESEIAGALATAIALNAGAAYTYA
                     LRALEAVEEQK"
     gene            17278..17631
                     /locus_tag="PXF40_000809"
     CDS             17278..17631
                     /locus_tag="PXF40_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5802177.1"
                     /translation="MKKLAWILGFAAMMPMMSSAKQASVQQVQAEKAAGIWIDVRSAE
                     EFQQGHLNGAINVTHTEIAQRIAEVAPDKNQPIHLYCRSGHRAEAALNELKKLGYSNV
                     TNHGGYDDLIKAGLK"
     gene            17691..18329
                     /locus_tag="PXF40_000810"
     CDS             17691..18329
                     /locus_tag="PXF40_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgB family protein"
                     /protein_id="HDL5802178.1"
                     /translation="MSAFNNFVNFVANIVAPMQRQFINFVRIAICIVMVWIGGLKVCQ
                     YEADGIAHFVSNSPFFSYMYKKGPNLVDDGTGKMVMEYTLHKNPEGKMVAKNIEWHKE
                     NGTYTASYIIGATIVTVGLLTLSGIWFPVSGMAGGLLTFGMSIVTLSFMITTPEIWVP
                     NLGGDMPTPAHGFPYLSAVGRLIVKDVIMMAGGLVAAAECANRILARRKAIA"
     gene            18464..19645
                     /gene="purT"
                     /locus_tag="PXF40_000811"
     CDS             18464..19645
                     /gene="purT"
                     /locus_tag="PXF40_000811"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HDL5802179.1"
                     /translation="MTTIGTPLRTNATKVMMLGSGELGKEVVIELQRLGVEVIAVDRY
                     DNAPAQQVAHRAYTISMLDGNALRDLVEKEKPDFIVPEVEAIATATLVELEQEGYNVI
                     PTAKATQLTMNREGIRRLAAEELGLKTSPYRFVDNFEQFQQAIQEIGIPCVVKPIMSS
                     SGHGQSVIKSEADIQQAWDYSQQGGRAGGGRVIVEGFIKFDYEITQLTVRHIHGTSFL
                     APIGHIQVDGDYRESWQPQQMSDIALKKAQETAEKITSALGGRGIFGVELFVCGDEII
                     FNEVSPRPHDTGIVTMASQELSQFALHARAILGLPIPEIYRISPAASKAIVVEGKSDN
                     VRFGGVDKVLAEIGTNIRLFGKGEVNGHRRLGVILARDENTVRALEKARRAYDKLDIQ
                     L"
     gene            complement(19737..21230)
                     /locus_tag="PXF40_000812"
     CDS             complement(19737..21230)
                     /locus_tag="PXF40_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005556599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HDL5802180.1"
                     /translation="MFKQLQQVGKAFMLPIAILPAAGLLLGIGGALSNKATVQAYPIL
                     DNPTLQGIFQIMASAGSVVFGNLALLLCIGLGIGLAKRDKGVAALAAVVGYLIMTGTI
                     SALIPLFPPETKGIDTGVIGSLVMGLITVKLHNKYHNIQLPQILGFFGGSRFVPIVTA
                     FAAIFVGAVFFLIWPAFQQWLVSAGQGIAEMGEIGTFFYGFLMRLSGAVGLHHMIYPL
                     FWYTELGGTEVVNGETIIGAQKIFFAQLADPTHQGLFTEGTRFFAGRFDTMMFGLPAA
                     CLAMYHAVPKARRGAISGLFLGAALTSFITGITEPIEFMFLFVAPWLYVFHAFLDGVS
                     FYIADLLNISIGNTFSGGVIDFTLFGILQGNENTNWLRVIIVGLPWAALYYFSFLFLI
                     KKFNVMTPGRAEESEEVVEQQTSSLTENAHKIIAALGSANNIENVDACITRLRVAVKE
                     VKAVDKATLKKLGAIDVLEVGGGVQAVFGAKAVLYKSEVNQILGKED"
     gene            21431..23278
                     /gene="ilvD"
                     /locus_tag="PXF40_000813"
     CDS             21431..23278
                     /gene="ilvD"
                     /locus_tag="PXF40_000813"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012055207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HDL5802181.1"
                     /translation="MPILRSATSTQGRNMAGARALWRATGMKENDFGKPIIAVVNSFT
                     QFVPGHVHLKDMGQLVAAEIEKAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRDLIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMAAMRLNIPTIFVSGGPMEAGKTKLSDQLI
                     RLDLVDAMIESADPNVSDERIDAIERSACPTCGSCSGMFTANSMNCLTEALGLSLPGN
                     GSMLATHADRKELFLRAGREIVELCRKYYQQDDESVLPRSIATFDAFENAMSLDIAMG
                     GSSNTVLHLLATAQEAGVDFKMEDIDRLSRVVPCLSKIAPNTNKYHMEDVHRAGGIMG
                     LLGELDRAGLIHRHVKTVLGLTIEEQLNQYDIIRNKDEDLHKFFRAGPAGIRTTKAFS
                     QDCRWDTVDDDRVNGCIRNVENAVTKEGGLAVLFGNIAEDGCIVKTAGVDESIWKFTG
                     TAIVFESQEDAVAGILGGKVKEGHIVIIRYEGPKGGPGMQEMLYPTSYLKSMGLGKKC
                     ALLTDGRFSGGTSGLSIGHASPEAASGGAIALINDGDTVAIDIPNRSINLMVSDEELA
                     ARRAEMEARGDKAWQPLKREREVSFALKVFGHFATSADKGAVRDKSLLK"
     gene            complement(23412..23762)
                     /locus_tag="PXF40_000814"
     CDS             complement(23412..23762)
                     /locus_tag="PXF40_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TusE/DsrC/DsvC family sulfur relay protein"
                     /protein_id="HDL5802182.1"
                     /translation="MWHFYLMTIELNNIQYPTDASGYLTNLNDWSVELAEKIAEKEQI
                     SLTAEHWEIIYLVRDFYQEYKTSPAIRMLVKTMAQKFGEEKGNSRYLQRLFPDGPAKQ
                     ATKIAGLPKPAKCL"
     gene            complement(23791..24456)
                     /locus_tag="PXF40_000815"
     CDS             complement(23791..24456)
                     /locus_tag="PXF40_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor protein"
                     /protein_id="HDL5802183.1"
                     /translation="MENRLAHSYSTGESLISTHKVLRNTYMLLAMTLTFSAVVAFVAI
                     QMNAPAMPWWGLLVGFYGLLFLTNATSNSSAGILSVFALTGFLGYTLGPILNRYIGAG
                     LGDIVALAFGATALVFFACSAYVLTTKKDMSFISGMMVALFVVLLVGIIANIFLAIPA
                     LSLALSSLFVIFSSGAILLATSNIIHGGETNYIRATVDLYVSIYNLFVSFLQIFGVLG
                     SDD"
     gene            24662..25210
                     /gene="pgsA"
                     /locus_tag="PXF40_000816"
     CDS             24662..25210
                     /gene="pgsA"
                     /locus_tag="PXF40_000816"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HDL5802184.1"
                     /translation="MKLNFPTYLTLFRVGLTPLFIVAFYLPTKYAPEISTLIFFIASI
                     TDAFDGYLARKWNQTTRLGAFLDPVADKVLVAVAFVCVAEYYHTWWITIPICIMIARE
                     IIISALREWMAELGERASVAVSIWGKVKTTAQMLALGGMLWRQNQLMEILAFILLYIA
                     VGLTIWSMMQYLNASKNSLLKS"
     gene            25288..27126
                     /gene="uvrC"
                     /locus_tag="PXF40_000817"
     CDS             25288..27126
                     /gene="uvrC"
                     /locus_tag="PXF40_000817"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HDL5802185.1"
                     /translation="MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLAS
                     YFRSQLSSKKTEALVANLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYP
                     YILLTKHKHPRLTAFRGSKKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKN
                     RSRPCLQYQIGRCLAPCVEGCYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAE
                     ALDFEGAARFRDQIQSVRAVQEKQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKV
                     LGNRSYFPKVPSNTDLTELADTFVGQFYLQMNQHRTIPNQIVIDHQLSESKALSEILS
                     EQAGHKVSILDNAIRGDKQRYLALARTNAMAALVLQLKQESHIQSRYQALKEMLKMSE
                     IKRMECFDISHTMGNQTVASCVVFDENGPLKSDYRRFNIEGITGGDDYAAMEQALLKR
                     YNRELPPEKIPDIIFIDGGKGQLNRALDVFAKLDVEWDKSKPLLIGVAKGVERKAGLE
                     TLIISKWDKEIHLPPDSLALHLIQHIRDESHQHAISGHRKKRQKAFTESGLESIAGVG
                     AKRRQALLKYLGGMQGVKSATLEEIQSVPGISKALAEVIFDTLKNS"
     gene            complement(27131..27406)
                     /locus_tag="PXF40_000818"
     CDS             complement(27131..27406)
                     /locus_tag="PXF40_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802186.1"
                     /translation="MKKLILLGLSVALTACSTPQQQSTVPMDMQAVQDYHQRVINKQT
                     VDKNTKQHDEPLNQSDKRSESINLPIHPIIYPSIGVGYHYGWKRYRY"
     gene            complement(27531..27884)
                     /gene="rplT"
                     /locus_tag="PXF40_000819"
     CDS             complement(27531..27884)
                     /gene="rplT"
                     /locus_tag="PXF40_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009635878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HDL5802187.1"
                     /translation="MARVKRGVIARARHKKVLKAAKGYYGARSRVYRVAFQAVVKAAQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGLSYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFAALVEKAKSAL"
     gene            complement(27993..28190)
                     /gene="rpmI"
                     /locus_tag="PXF40_000820"
     CDS             complement(27993..28190)
                     /gene="rpmI"
                     /locus_tag="PXF40_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HDL5802188.1"
                     /translation="MPKIKTVRGAAKRFKKTASGGFKRKQSHLRHILTKKTTKRKRQL
                     RHKSMVAKADQVLVVACLPYA"
     gene            complement(28454..28996)
                     /gene="infC"
                     /locus_tag="PXF40_000821"
     CDS             complement(28454..28996)
                     /gene="infC"
                     /locus_tag="PXF40_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015871208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HDL5802189.1"
                     /translation="MKPVKRVQSNRAHRLNDEIRGVKEVRLTDENGEQVGIVSLQDAL
                     NRAEEAELDLVEISPNAEPPVCRIMNYGKFIYEKEKAAKEQKKKQKVVQVKEIKFRPG
                     TDDGDYQVKLRSIIRFLEDGDKVKITVRFRGREMAHQEIGMDVLERVKADTAEIAMVE
                     SAPGKLEGRQVVMVIAPKKK"
     gene            complement(29155..30954)
                     /gene="recQ"
                     /locus_tag="PXF40_000822"
     CDS             complement(29155..30954)
                     /gene="recQ"
                     /locus_tag="PXF40_000822"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HDL5802190.1"
                     /translation="MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGG
                     KSLCYQVPALCLDGITLVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQK
                     ALSGQLKLLYLSPEKVMTQGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGL
                     RNTFPNVPLMALTATADLTTRSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQ
                     LIKFISKQQGKSGIVYCNSRNKVEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQR
                     DDIQIVVATIAFGMGINKSNVRFVVHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDP
                     SDYAWLQKILLEEPESEQRNIKQHKLQAIGDFAESQTCRRLVLLNYFGEHRQEQCKNC
                     DICLDPPQQYDGLLDAQKVMSVIYRTGQIFGQHHIIAVLRGMNNLKIREHQHDQLSVY
                     GIGKEQSQHYWQNVVRQLIHLGLIIQNIANHSALQLTESARPFLRGEKQLQLALPRLG
                     ISATAFVQKQASHRYDKDLFARLRFLRKQIADLENIPPYIVFNDATLQEMAEFLPTSK
                     VEMLEINGVGERKFERFGQAFMSLIKEYQNNRK"
     gene            complement(31063..31368)
                     /gene="cyaY"
                     /locus_tag="PXF40_000823"
     CDS             complement(31063..31368)
                     /gene="cyaY"
                     /locus_tag="PXF40_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HDL5802191.1"
                     /translation="MNTAQFHQAVEQVWQQIEEKIYDEGLSVDTEIQGAVCTLTFDDE
                     SQVIINKQEAMLELWLASKLGGFHFKNVEGEWVTDEGRSFWQHLEEAFARHGESVSF"
BASE COUNT         9050 a         6160 c         6948 g         9424 t
ORIGIN      
        1 ttgggtggaa aagaatttaa gctcaaatta atctgacaga cacggtaatt taaaacggga
       61 gactgtcaga tcaagtctga tcttctacaa ctaagccttc tcagaataaa taaattttca
      121 caagcggtgc aactttgcaa aaacttcggt attatgtagc agttgcacaa aaccccaaat
      181 tcattaaaac cgcttaaaaa tgaaatgccc taaactgatt tttcagtcta gggcatttat
      241 tatcacatat tatggttaat agggaaaact cacatcattg ttatgctggt gatatttttg
      301 ccaaaatgcg tgatattgtt ttttcaccga tgtgtttaat aaaaacggga ttatcaagac
      361 ataggtcggg caattccata gcattgcacg ttgtgtatcc gtgccgattt tggtgcgtaa
      421 gtaaccaaac tgatacatta gacccaatcc aaccgtcacc tattctaata gcataataac
      481 taaggtcgca tcattaaatt aaaagctcat tttttgcaaa aaatttccca aattccaccg
      541 cttgttggcg tacaataggc ataattttga tttacgatgg aggcagaatg tctgaaccga
      601 taaaacttac gcagttcagc cacggggcgg gttgaggctg taaaatttcg cctaaggtgt
      661 tagggacaat tttacaaact caattagaac aatttgtcga tccgaattta ttggtaggca
      721 atgaaacggc ggacgatgct gccgtctatg atttagggaa cgggcaggcc attatcagca
      781 ccaccgattt ctttatgccg attgtggacg ccccgtttga tttcgggcga attgctgctg
      841 ccaatgcgat tagcgatatt tatgcgatgg gtggcaagcc gattatggcg attgcgattc
      901 tgggctttcc ggtgaataaa ttgccggctg aagtggctca acaaattgtc gaaggtgggc
      961 gttttgcgtg ccagcaagcc ggtattgcct tggcgggcgg gcattcgatt gattcgcccg
     1021 atccgatttt cggcttggct gttaccggca ttgtgccgac cgaacgggtg aaacgcaatg
     1081 cctctgcggt ggctgggtgt gagctgtttt taaccaagcc tttggggatt ggcattctaa
     1141 ccacggcaga gaaaaaaggt ttgttgaagc ctgaacatca acatctggca agcgaggtaa
     1201 tgtgccaaat caacttgatt ggttcagcgt tttccgaact gcctgaagtc acggcaatga
     1261 ctgatgtaac cggttttggc ttactcgggc atttaagcga ggtgtgtcaa ggctcgggct
     1321 tacgggcgga ggttgatttt gaggatattc aagtccttga tggcactaag gagtatattg
     1381 cattgggagc agttccgggt gggacaaatc gcaatttcga cagctatggg catttgattt
     1441 cggcaatgac ggacgagcaa aaagcgattt tgtgcgatcc gcaaacctct ggcggtttat
     1501 tagtggcggt gctgccacaa gcggtcgaaa aagtgcaaca aattgcaaat cgggcaaatg
     1561 tgccgttatt ccacgttggc agattgctgg aaatggaaca gggcaaacca cggattgagg
     1621 taatttgatg tttaaaccaa atgtaacaat ggcttgcgtg gtgcattgta agggaaagtt
     1681 tctgtttgtg gaagaaattg aatatggcaa acgtaccctt aaccagccgg cagggcattt
     1741 agaaaaagat gaaaccttgc tggagggggc aagccgtgag ctgtttgagg aaaccggtat
     1801 tcgggcagaa atggcaaatt tggtgaaaat ttatcaatgg caagcccctc gttcacaaac
     1861 cgatttcttg cgttttctgt tttcggtgga actggaagag tggctggagc cgaatccgca
     1921 agatgcggat attacccaag ccctttggct tactttagca gaatttgaag actacattca
     1981 gcaacaaggg caatgtgcca gaagcccgtt ggtggttcaa tcggtcaaag attatttaag
     2041 cggtgagcgt tatccattaa gtttgttgaa tgcgtttgaa tgggcgagaa atggaaaata
     2101 aaacaacaac ccaatttgat gtggtgattg tgggcggggc agtgaccggc tcggtgctgg
     2161 cattggcgtt aagtagtttt actcatcaca aaatctcgat tgcgatagtg gaaaaatcgc
     2221 tgccggacta tgaacagcaa ggcggttttg atgctcgcag tattgcctta gccgaaggca
     2281 gtttgcaaaa aatggggcaa atcagaccgc ttgcaggctc aagtttaggc gagatgatta
     2341 gcgaaatcgg cacgccgatt cagcaaattc aagtagcgga taaagggcat tttggtaaaa
     2401 cgaccttgaa agcaagcgag cagaatgtgg ctcaactggg tatggtggtg gaacttgcaa
     2461 aattcggcag aaaattgacc gcttgtcttg cacagcaagc taatattacg cttttttgcc
     2521 cgaatcaagt ggttggcatt gagcgttccc aacaacattg tggattgagc ttgaaaaatg
     2581 gtgagaaact aagctgttcc ttgctggtgg cggcagatgg tattcaatct cagattgcaa
     2641 aacagtgcgg tgtggaaacc gtaaaagtaa gggattatgc acaatcggca attatcgcca
     2701 atgtggaact gagtgaatct caccaaaatc aagcctttga atattttacg cctcaaggcc
     2761 cttttgcttt attgcctttg agcggaaata tgatgtcgtt ggtgtggtgt gtgaaagagc
     2821 cgaacgagtt aatccaactt tcagacagtg aatttttagc ccgtttgcaa caacaatttg
     2881 gttggaagtt agggcaattt gttcgagtga gcaagcggtt tgtttatccg ctcattttgc
     2941 aaaaagccca gtcgcatatt caccaccgct tagcagttgt cggcaatgcc gcacaaatgc
     3001 ttcacccggt tgctgggcaa ggtttcaact taggcttgcg tgatttgact accttagcgg
     3061 aattagtggc tttggcgttt aatcaaggga aagatatagg cgaattttcg ctcttatcaa
     3121 cttttgagaa tgagagaacg caagatcaag ccagaatgat aaatgctaca agcggtctga
     3181 tttcgctttt ttgttgcgaa atgttaccag ttcaggttgt gaggaattta gggttattaa
     3241 cggtttccca ttcaaaaata gccagagatt ttgttgctaa tcaggcatta ggttggtaaa
     3301 aaacacaaaa gcagcaattt tctatttgac actgttttta aaaaggcgta ttatccaacc
     3361 cgtttaaaaa tctcaccaaa gccttgaatg caaattcaag gctttttcct ttttagtgaa
     3421 agcctatgaa ttttgtttgc cgtaaaatcg gcaaaaaaat tttgcctaaa attcgcaatc
     3481 gtttgcgaaa taggtttata gcgttgtttt catctgggta actgcaatgg ttacatcgca
     3541 atacatcaaa gagagtaaaa aatgaccaca gaaaatatga gtacgccaaa gcaggcgttt
     3601 atcgggctgc aaatgctgtt tgttgcattt ggggcgttag tattagttcc gctgattacc
     3661 ggtttagatc ctaatgttgc ccttcttacc gccggtgtcg gtacgttaat cttccaaatt
     3721 tgtactaaac gtcaagttcc tgttttcctc gcatcgagtt tcgcttttat cgctccaatc
     3781 caattcggtg ttcaacaatg gggaattccc gtcacaatgg gagcattgct ctgttccggt
     3841 tttatttata tggcattatc tgctttagtg aaagcgaaag gggtgaatat tctgcataaa
     3901 tacttccctc caatcgtgat tggaccggta attatggtga ttggtttagg tcttgctcct
     3961 gttgcggtgg atatggcaac gggtaaatcg gcgaatattg cctataacac cgctattatt
     4021 gtttcaatga taacgctggt aactacgctg attgtggcgg tgtttgcgaa agggctatta
     4081 aagctcgtgc caatattagc aggtttaacg gtgggatata tcttgtctgt ttttatggga
     4141 ttggtggatt ttactaaagt ggttgaagct ccttggttta gtctaccgaa agtttccgca
     4201 ccggaattca aattagatgc aatcttgtat ttattaccta tcgcacttgc tccggcagtc
     4261 gaacacttag gcgatgtaat ggcaatcagc caagttgccg gtaaagattt tatgaaaaaa
     4321 ccggggttac accgcacgct tttaggtgat ggtttagcaa cttcagcagc tgcggcatta
     4381 ggtggcccac caaatacgac ttactctgaa gtaaccggtg cggtaatgct aaccaaaaac
     4441 ttcaatccga aaattatgac ttgggctgcg tgctgggcta tcgctttctc attctgcgga
     4501 aaaatcgggg cattccttgc cactatccct acttttgtga tgggcggtat tatgatgttg
     4561 ctgttcggtg cagttgcggt tgtggggatc aatactctaa ttaaagctaa agttgattta
     4621 agcattccac gtaatctttg tattgcttct gtagtaatga cattcggtat tggcggtatg
     4681 ttaattaaca tcggcgaatt ctcattaaaa gggatcagct tgtgtgcatt agtcgctatt
     4741 gtacttaaca ttgtattacc aaaagaaaaa gtagaagatt ctgctgctca ttaatcaaag
     4801 gacgctgtgg cgtccttttt gctaataacc ctctatttgt aaataaaaag gaataacact
     4861 atgcaaaaac tcacattttc accaccactt ttaaatacgc cttgcccttg gtgttcggag
     4921 ttagagagct tgcgtgaact ttatgcgtgt gaatataccg gtgcggtaac aacccgtact
     4981 tcaatgcctc aaccatatcc acacgattgg gcgaagaacc aatatgtact ctttgattcc
     5041 aacgcacaga aaacagcaag tgtgaatact caagatgcaa ctagcttaca aacagcaagc
     5101 cttaacacca tcggtttaag cccaaataat ctggatacca ccatcagctt tgtacgcacc
     5161 atttcaaatg agctgacagc gccatcaagc aaaccattta ttatttcggt gtttggttca
     5221 cccgaagagg tgggggaatg ttatgaaaaa attgttgctt tccaaactga agtgaaaatg
     5281 cctttggcaa tggagattaa tatctcttgc ccgaatattc cgggtgaaat ttcgcctgct
     5341 tattccgcag aagaattatc acattacttg cacgcactac aaacttcgct aaaaaaactg
     5401 gctcaaggtg ataatacttt accaatcggg attaaaattc caccttttac ttaccaaaat
     5461 caatatgatg aattaatcaa aggcttatta caagcggtcg aaaatggcga aaatttacca
     5521 atttccttta ttacttcaac caatacgctt ggctcatcgc ttgtcttaaa tgctggcaaa
     5581 gcggtattaa attcagaagt gggaacgggc gtaggcggaa tggcaggaac ggcaatccat
     5641 gcactttctt tggggaatgt ttacacgatt cgccaaatgt tagatcaaga gcctaagctc
     5701 aaacatcttc aaattattgg tgtgggcggc gtgaatgata aagccggctt tgagcgaatg
     5761 aaatcggttg gggcagactt tgtggggtta gctaccgcat taggggtgaa aggaatcggc
     5821 gtttttaaag agattctgtc tgaataatga agaggagggc gtgcattgca cgcccgaata
     5881 aatgaaatta gcctaaccat ttctccacta attcattagt ggtttcttta tgtacccaca
     5941 tactgccaag ttccggcatt gggaatttgg tgtggttgta gccgacaaat tggcggaaat
     6001 caaacacggc gtgcgggtag ccgttgatca gtaaaaaggc ttgatagccg tcttcactcc
     6061 agcaaatttc taaacggcga ggttctttta atgaattttg ctcaatatcg ctgacccgaa
     6121 acacaaataa actatccact accggctgtt cggtttggtg taagtccatt gcataaaagt
     6181 agccgctttc ttcatcaatt tcaaacatca ctactaaatg ttcgtgctgg gttgaatgag
     6241 cgccattacg gtaaggttcg ttcagtagaa tatgagcagt taaaacagag tagagcatta
     6301 aattatcctt ataagtaaaa tgccaccgat ttctcagtgg catttaaata tttaatcagg
     6361 caattacgct tgacctttaa tctctttacg gccgttgaac ggagccggtg taccagcacg
     6421 ctctaacgct tcttcgatac ggattaactg gttgtatttc gctacacggt ctgaacggct
     6481 cattgaaccg gttttgattt gacctgctgc tgtacctact gctaaatctg caatggttgc
     6541 atcttcagtt tcgcctgaac ggtgagagat aactgcggtg taacctgcat ctttcgccat
     6601 tttgattgca gctaaagttt cagttaaaga accgatttgg ttgaatttga ttaagattga
     6661 gtttgcgata cctttctcaa taccgttttt caagattttg gtattggtta cgaataagtc
     6721 atcaccaact aattgtactt tgtcgcctaa tactttagtt tggtatgcga aaccttccca
     6781 gtcagattcg tcttgaccat cttcgataga cacgattggg tactctttgc ataagccttc
     6841 taagtagtga gtgaactctt gtgaagtaaa ggttttgcct tcgcctttca tatcgtacac
     6901 attgcgttct ttgtcgtaga attcagatga tgcacagtcc atcgctaaag ttacgtcttt
     6961 acctaacaca tagcctgctt tttctaccgc ttctttaatg cacgctaatg cgtctgcgtt
     7021 tgaagccaag tttggtgcga aaccaccttc gtcacctaca gcagtattta agcctttcgc
     7081 ttttaatact tttgcaagat tgtggaatac ttcagcaccg atacgaagag cttcttttaa
     7141 tgtagaagca cctaccggtt gaatcataaa ttcttgaatg tccacgttgt tgtcagcgtg
     7201 ttcaccacca ttgatgatgt tcatcattgg taatggcatt gagtaaacac ccggtgtgcc
     7261 gtttaattca gcaatgtatg cgtaaagcgg taagcctttt gaagcggctg ctgcttttgc
     7321 tgttgctaaa gaaaccgcta agatagcgtt tgcaccgaat tttgatttgt tttctgtgcc
     7381 atctaaatcg atcataattt ggtcgatttc agcttgtgca gaaccgtctt tgcctactaa
     7441 tgcgtttgca atttcgttat ttacggcaga aaccgctttt aatacacctt tacctaagaa
     7501 acgacctttg tcgccatcac gtaattctaa tgcttcacgt gaaccggtag aagcacctga
     7561 tggagcggct gctaagccta caaaaccacc ttctaagtga acttctgctt ctacagttgg
     7621 gttaccacga gagtcgatga tttcacgacc gattacttta acaattttag ccattgttga
     7681 tgtcctctaa tatacgagtt aatagaaaaa agaataggta tatagtaaag cgattttctg
     7741 cttttgtctt ggaaaaactg attgagtggc agaaaatttg ccactaattt gatctaagac
     7801 tatattcgcc tgagattata gcaacctttg caaaaaacgg caaaaatttg cccgcttgta
     7861 atgcttattt tttgactaaa aaagtcaagg tttcataatg tgctgtgtga gcaaacatat
     7921 caaacagctg cactttgtgt agttcgtaat ttgtcaaaaa tgtaaaatcg ttcgccattg
     7981 agacggcatt acaactggag taaatcaaat aaggtgagcc taattgattt aaaaattctg
     8041 ctaatagttt gccgatacca cgtcgaggtg ggttcacaat cactaaatcg ggtggagaac
     8101 cagcttcatt taaagcaaat tgtgcagaat ctaatgaggc aaattttacc tgctttaggc
     8161 cgagtttttc agccgatttg gtcgcacttg caatagctga ggctgaaatc tcaatgcctg
     8221 tcagctccac gttcgagttc ttcgcttgca aggcgttggc acaatgtaag ccgaaaccac
     8281 cgacaccgca gaacaagtcc cacaatttag caataggtaa atgctcaatc cagctttgtg
     8341 ctgtgtggta aagctggctt gctaccacag ggttagtttg gaaaaagccc tgagggcgaa
     8401 taaatagcgg tatgccgtta aaatgttctt ccagcacttt ttgttcggtg aggaaaatct
     8461 cagtttcgcc ttctaaaaga gcagcgtgtt ggggctgaat attcagacta actactgagt
     8521 tgggtggcag tttttccaac agttcgggca attcccgttc aaccaatgca cgctttgctt
     8581 cactacgaac cacaaaacgg agcataaatg attgattata ttggctttcg gtaatcagaa
     8641 tatattttag ctcacctttt ttcttactga tgttatacgg cactaaacca gctcgagcga
     8701 taaaatcttt caaaatcgga aaaagtctat gaaatgagga cgggtagagc agacagtcgg
     8761 ttaaatccac cccgctttga gcatcatttt gatcttttaa aatgcctaaa atcgggcgtt
     8821 ctacactgcc ggagaccacc attttcgctt tgttacgaaa ttgcgaaatt ggcgagccga
     8881 caagcggtaa gatttccgtt ttattttgca aaataaacgg caaaatcaac cgcttgagat
     8941 cggcctcttt ggcggctaat tgcgtgctgt atggcttttc aatccactgg cacgaagtac
     9001 agtcgccacg ctcaaaatgc gaacaatgca acaagctaga cattcgcttc cttccattcc
     9061 agccagttgt tttgtaaggc cgttaattca gcctgagttt gttggtagcg agagctgttt
     9121 tccagctctc gccaagtcac ggttttgcgt ttcattaaag aaaggcgacg ttctttttgt
     9181 gcttgagtcg gctgatattt cagcccgtct aacacttgca ccaggccttc aggctcgtta
     9241 caaaggagca ataaatcaca gccggcttgg attgcttttt cagaacgctc gacaaaattg
     9301 cccataaagc ccgcaccttt cattcccaaa tcgtcagaga atatcacacc gttaaagttc
     9361 agctgtttac gcaatacctc tttaagccaa tagcttgaac cgcttgccgg ctggctatca
     9421 cattgggtgt aaacgacgtg ggcaggcata atggcagaga gttttccttt ggcaataagc
     9481 tgtttgaacg gcagaatatc gtgattaaaa atccgctctt tcgggcgatc atcaaacggg
     9541 gtttctaaat gcgaatcggc taaaacgtgt ccatgaccgg ggaagtgttt gccggtggtc
     9601 gccataccga tttcacgcat tccgtcaata aaggcttcgg caacaggcaa aatcgctgct
     9661 ggctcttgcc cgaatgagcg atcgccaatc gctttgcatt cgtgtcctaa atccagtacc
     9721 ggagcgaaac tgaggtctat atcgagggca aacatttctg ctgccatcaa ccagccggtt
     9781 tctttcgcta attgcattgc ttgctctggc gttgtggcaa gttggttaaa agattgcatt
     9841 gccggcagtt tagtaaagcc ttcacgaaag cgttgcaccc gaccgccttc ttggtcgaca
     9901 gtaataagca acggtttttt cacccgctgg cgaatggatt tcactaatgc ctgaatttgt
     9961 gctttgtcgt agaaattacg ggtgaataaa attagcccgg aaactaaagg gtgttccagc
    10021 atttcgactt cttcttgagt cagttcttta tctttaatat caatcagtaa cataattttc
    10081 gttgagctat ttgcaaaaaa atgagcagat atgaccgctt gttgtgccta ttctacatta
    10141 aaaagccctt gatgttgatc aagggcgaat gattaagggc ataaatgaga cagagcaatt
    10201 atgcttgttc taatttagct tggttacgac gcatttttat gttgagcatt tcaaccacaa
    10261 ccgagaagcc cattgccgta taaaccgctg cttttggaat atgaatatca aaaccttcgc
    10321 cgactagtac aataccgatt aaaatcaaga acgctaaagc gagattttta atggttgggt
    10381 tgttatctac aaagtcccca atggttttcg ctgctaacat cattaccgca actgcaatga
    10441 taatcgcaat aaccattacc ggaatatcat ctgccattgc cacagcagta atgactgaat
    10501 caagggagaa aataatatca aaaattgcaa tttgaattaa caccataaaa aagctggctt
    10561 ttttaatgga ttcgcttttt tcttcgtgag attcggcaga aatggattct ttcagctcca
    10621 ttgcactttt aacaatcagg aataatccac cgatgagtag aatgagatct ctacctgaaa
    10681 ttggattgtt gccaatagtg aaaagaggct cgaccaaacg catcatccaa gcaagcgaga
    10741 gaagcaataa aatacgggtt cccattgcca gccccaagcc gataattcgg gcagattggc
    10801 gttgttcaat aggtaaacgg gaaacgagaa tactgatgac gatgatgtta tcaatgccta
    10861 atacgatttc aagcccggta agtgtaaaga gcgcaaccca agcttcagga tttgtgatcc
    10921 agtcaaacat aaaaatgtcc ttttaaaaat aagggattaa gtgatatttt ctatcaaata
    10981 gaattaaagc cgacatctta tagagtgtga ggacaaattt aaagggggca atgcaaaaag
    11041 ttttgtaaaa tttcggcggt aaaatgttta cgcaaataga aaccaagagg gagagattga
    11101 acaatctccc ctttagcgtt gatagcagag gtgatagagc ggttatttct acctttgggt
    11161 ctgagttgta acacttcgcc taaggttgca ttaattttat gcagttcacc taacacaatc
    11221 aactccatta attcctccca atcttgctgt aggcgggatt cttgtgtgat agtcggagac
    11281 cataaaatcg gctgaccgat atggcgttcg gcaaggggta tctttcgttc cccttcaacc
    11341 ggaatccaaa gcacacggga aagcttatgt ttaacgtggg aggtttccca aataataccg
    11401 ttgttttggg ttaaaggagc aaggctgacg aatgtggttt ccagcggtaa tcctttctga
    11461 ttgaccggaa tggttttcag ctcaatgcct aaatgtgcaa aatcctgttc ggctttactg
    11521 ccggctttcg cacctaaagc ggtttcaatc agagtaccga cccagccttt atctcgtttc
    11581 agatctgctg gtatcggaat atgaagcatc tcggcaattt cacctaaagt gaaccctgcc
    11641 agccattccg ctttgcttaa taatgcctgc tcggttggag agaatgtaga taattgcatt
    11701 gcacttagtt aattagacta aactggcaag cggtcaaatt taggcagaaa tttgcaaaaa
    11761 attactaaaa aataaccgct tgtgaggaaa ttacatccaa gcattactgc gaataacgcc
    11821 tactgcaatg ccttcaattt caatatattc ttgagcaggg tttactacaa tcggttttaa
    11881 ttcatcgttt tcagggtgta agtaaattaa ttcacctttc ttctctaagc gtttaacagt
    11941 cacttcatca tttacccgag caaccaccac ttgcccgtta cgagcggtat tggttttatg
    12001 aacggctaat aggtcaccgt ctaaaatacc gattttttcc attgaattgc catttacttt
    12061 gagtaaataa tcagcacttg gattaaacat cgcaccattc accgggtaat ggttttcaac
    12121 gtgttcaacc gctaaaatag gtgtgccagc agctactttg ccaatcaacg gtaagccttc
    12181 atcttcatcg ttggcagctt ggttttcgtc ttcgactaaa atgcgaattc cacgagatgt
    12241 acctgataac atttcaatat agcctttacg agcaagggct tttaagtgtt cttctgccgc
    12301 attaggtgat ttaaagccga tttcacgggc tatttctact cgggttggtg gcataccggt
    12361 ggtttcaata tggtttttga cgaaatcaaa aatttcttgc tgacgggcag ttagatgttt
    12421 acgcatttta agttaatcct cactgtcttt atatacagaa aatattgata gtatatacag
    12481 tatttttgat tttgtaacta ataatttcac gaaattccat aaaaatttat ggtagaatgg
    12541 aagaaattag aggttagacc tccaacaata acgattctaa aaggatattt atatgtctgg
    12601 cttattaaat ttttatcgag ctttcctaaa cttaccactt tcacttttag taaaatctcg
    12661 ctctattccg actcatccgg tggctgaact ggaactaaat cttgaacagc cgattgtcta
    12721 tgttctacct tatacctcgc aaaccgattt attaatttta caaaaaaact gcttggcttt
    12781 gaatttgccc gatccgttgc aagaaaatgt gattgaaggg caaacattgc ttcgttttgt
    12841 atttttagat gaaggtcgcc gtttttttaa atctaaaggg gcgaaaagtg agacagagtc
    12901 gattttttat cgttatttag atttacatcg tgctaatgct gaattagacg tccaattagt
    12961 gccggtttcg gtattatggg ggcgggctcc gggcaaagaa gatgcccgcc atttacaggt
    13021 gcttacctca ttccaacgtt ttttatccat ggtttggttt gggcgtgata attttgtacg
    13081 tttctcccct gcagtatcgt tacgctatat ggtaactgaa tatggtgcag atgaaaaaat
    13141 cgctcaaaaa atcgcgcgtg tggcgaaaat gcactttgca aaattgcgtt attcagcaat
    13201 ggggcctcgt ttaccaaatc gtgatgcgat gtttaataaa atcctgaatt cagaggtgat
    13261 tcaagctgcg attgcggaag aagcgaagaa atcatcgcct gaaaaggctc gcaaagaagc
    13321 cgagaaaatc attaatgaaa ttgccgctga tgtaaaacac gagagtttgc gtgtagcaga
    13381 tcgagttctg agctggcttt ggaataagct ttatcaaggg atcaacgtgc aaaatgcaga
    13441 ccgtgtgcgt aaattggcat tagaaggtca cgagatcgtt tatgtgcctt gccaccgtag
    13501 ccatatggac tatttgctcc tatcttatct actttaccat caaggattag taccgccaca
    13561 tattgccgct gggatcaatt taaatttctg gccggcaggc ccgattttcc gtagttgggg
    13621 agcatttttc attcgccgta cctttaaagg aaatcgcctc tattccacca ttttccgtga
    13681 atatttagcg gaattattct atcgtggtta ttcggtcgaa tattttattg aaggcgggcg
    13741 ttcacgcaca ggtcgtttat tagagcctaa aaccggtatg atgtcgatga gcctacaagc
    13801 cttacagcga gggctgaata gatctttaag tattgtgcct gtttatatcg gttatgaaca
    13861 cgtcttagaa gtcgatactt acgctaaaga gttgagaggt gcggcaaaag agaaagaaaa
    13921 tgcgggcttg gtgctacgag tgctgaaaaa actgaaaaat ttaggtcaag gatatgtgaa
    13981 tttcggtgag ccaattttgg tgaataatta cttaaatcaa tatttccctg agtggaaaga
    14041 gccttccgaa gatggacgac ctaagtggtt aaatgaagcc gtggataata tttcacatca
    14101 agtaatggtg aatatcaata aagcggcagc agttaatgcg aaaaacttag tggggtcagc
    14161 attattggca tctcgccagc gtgcattaac ccgtgaacaa ctcattgaac aacttggaag
    14221 ttatattcag ttatttcgta atgtacctta ttctaaagat atgacattac caactgaaag
    14281 tgcagaagtg atgttgaatc atgttattca tttacctcgt tcgggcgttt taattgaaaa
    14341 agataatttt ggtgaactgg ttcgtttaga acgagaatct gctgtgttaa tgacatatta
    14401 cagaaataat gtgcagcatt tatttgtgtt gccttcactt gttgcaagta tggtacttca
    14461 tcatgaggct gtttcgaaag atgttgtgat taagtcggtt aatcgtattt atccattctt
    14521 gcaagcagag ttattcttac actttaagca agaagaatta aaagcacata ttgaagcaat
    14581 tattgcggaa ctaagtcggc agggggtgat taaaaacgaa agtgatatgt taatgatcaa
    14641 tcgctcacat attcgtacct tgcaattaca ttcagctggt gtgcgtgaaa tccttcaacg
    14701 ttattatatt agcctaagtg tcttgttgga gcagccaaat attagtcgtg gctatttaga
    14761 aaaagagagt agttcaattg ctcagcgttt atcagtcttg catggtatta atgcgccgga
    14821 gttttttgat aaggcgattt tctctacctt tacatcaagt ctaaaagcac aagggtattt
    14881 tgatggtgat gataatttag cgattgcaaa agttaaagaa acggaatcgt tgttacgtag
    14941 tttgatttcg attgaagttc aacagaccat tcaaggtgcg atggctaaag tcgcagaatc
    15001 tgtagagaat cctaatatcg caggataata aatcaaagaa gggcgctaac aagcgctcgt
    15061 ttcttgcaat tttgttgcca aaaataaaag ctgaatgcgc gaccacattc agctttttta
    15121 cttcctatat aattattttg gttcaccgat tggtaaaaca gtcttaccaa aactttcatt
    15181 aataatatcc gcagcggcta agtagaacgc taagaatgcg gttaataaac cgaagttacc
    15241 accaatgtta gttagggtgg tgttatgggt aaaatcacct gcggctaaaa ggtagaaagt
    15301 aatggttaaa cttaagaaaa tagcttgtaa tgcacgggct tttgctagtg tgccgatgaa
    15361 catcataagt gtgaatgttc cccaagctac taagtaccaa ccaacgaatt ctgccgatac
    15421 attcgcagca aagaacactt taaataatgc aaaagaccac cagaatgcac catagctggt
    15481 aaacgcagta aagccgaacg tgttaccttt agcaaattca aacatacctg caatcatttg
    15541 tgatgtgcca ccgaaagcaa atcccattgc taaaactaaa cctacgtttt caccgctgaa
    15601 tgtaccgtta ttgattaggc ttagtaaaaa tgtagtaagt gcaaaaccgc ataaaccgag
    15661 cggagccggg ttagttcctg aatttggagc tgacattgaa aacctctgtt atattgttac
    15721 accataagtg tggtaattgt ttatttacgc cgataaatca gacgttatgt gcctaaaatt
    15781 tagggcgata aagtatagcg attttgcagt aaattgacta gaaatttccg agacaagcgg
    15841 tgagattttt gcaaaatttt gccaaaaaat gaccgcttgt tgttgtcatt tagctatgga
    15901 tttaactgcc gatattggct gggtgttacg caatattgct ttttaaaggc ggtaataaaa
    15961 tgcgactcgg attggaagcc gcaagataag gcgatactta ataccgaccc agcttggctt
    16021 ttgagcagca ttgctgcttt ttgtagccta attttgtgta caaaagcatg tgggctaata
    16081 cataaatgtt tgttaaataa gcggactaac tgggcacgag aaaggtggat aaatgccgcc
    16141 atatcatcga cttgccattc gtgttcggga ttaagcaaaa tagctttgat caaaggtctt
    16201 aagtgtaagt cttgccaacc ttttaaaata ccgaataact gattgttatg gttaactaga
    16261 tgttctcgta agatcatagt taaaataaca acagcaagcg agttaaccac agattttacg
    16321 gctaaattag gtgtttctgc ttcttgtttt agaatatcta acattgcttt taatggtgtc
    16381 tcggcaactt gaaatacgat catttcaggt aagctttcca ttaattcggc ttgatggtca
    16441 taataaaaat ggaggcagaa catatcgcat tctgattgag aaagtcctgc ttgggtgagt
    16501 gtaaatgcac ccaattgttc agggtttacc gcatttttgc tggtcaaagg ctgtatttga
    16561 ctacgtaatg tatgatcggc aaatctgggg aaaaatacaa tatctccctg tttaaggtga
    16621 tgggttttcc cattatgttg tagataagct tgcccatagc tgatgatatg agcgattgct
    16681 tgtccggttt gatgcggatt ctcaagttgc caatctccct gtaactgaca tttcacactg
    16741 attccggctg agatttgagc gaaagctaga agcctatcta atatatccat tgttcattcc
    16801 ttatatttcc accttaaatt gcgattattt cattataata tgagctgatt tgataataaa
    16861 gtttatcaga taaacgcaat aataaatgcg ttttttcata ttattcactt taggaggaaa
    16921 tcaatatgtc ttcattccaa aattggacag aacacacagc tcacgttaag caatcttttg
    16981 gtaaattagg gcaaaaacac cctaaaatgc ttgaagctta taaagcatta ggtacagcgg
    17041 ccgcagcgga agcattagat cacaaaactc gtgaattaat tgcattagca gtagcgatta
    17101 caacacgttg tgaaagttgc atcagtgtac acgcagaaga agcggcaaaa gcaggtgcaa
    17161 ccgaaagcga aattgccggt gcattagcga ctgcgattgc attaaatgcc ggtgcggcat
    17221 atacctatgc tttacgtgca ttagaagcgg tggaagagca aaaataagga gcaataaatg
    17281 aagaaattgg cttggatttt aggctttgca gctatgatgc caatgatgtc tagtgctaaa
    17341 caagcatcag ttcagcaagt gcaggctgaa aaagcagcgg gcatttggat tgatgtacgt
    17401 tctgctgaag aatttcagca agggcattta aatggtgcaa ttaatgtaac gcatactgaa
    17461 attgcacaac gtatcgcaga agttgctcca gataaaaatc agccgattca tctttattgc
    17521 cgctcgggtc atcgagctga agcggcgctt aatgagctaa aaaaattagg ttacagcaat
    17581 gtaactaatc atggtggtta tgacgatctg attaaagccg ggttgaaata actgttttga
    17641 gtgccaagca tttgcttggc acttttcgtt tatatctgag gttaaaaatt atgagtgctt
    17701 ttaacaattt tgttaatttt gttgcaaata ttgttgctcc aatgcaacgc caattcatta
    17761 actttgtacg tattgccatt tgtatcgtga tggtttggat tggtggttta aaagtctgcc
    17821 aatatgaagc agacggtatt gcccattttg tgtctaatag cccgttcttt agttatatgt
    17881 acaaaaaagg cccgaattta gttgatgacg gcacaggtaa aatggtgatg gaatataccc
    17941 ttcacaaaaa ccctgaaggt aaaatggtgg caaaaaacat cgaatggcat aaagaaaacg
    18001 gcacttatac tgcatcttat atcatcggtg caaccattgt gacggttggt ttattgacgt
    18061 tatccggtat ttggttcccg gtttccggta tggcgggggg cttactcacc tttggtatgt
    18121 cgattgttac actctctttt atgatcacca cccctgaaat ttgggtgccg aatttaggtg
    18181 gggatatgcc aaccccagcg catggtttcc catatctgtc agcagtcggt cgtttaattg
    18241 tgaaagatgt gattatgatg gcaggcggct tggttgccgc agcggaatgt gcaaatcgca
    18301 ttttagccag acgtaaagcg attgcttaat tgatagtggt aatgcaagcg gtcattttct
    18361 tgtaaaattt tgcaataaaa tgaccgcttg ttttttgtca atttgccata atttcaagta
    18421 taattcaatt acgtaatcgt ttgcttttat ggagaggaat aaaatgacaa caatcggtac
    18481 accgttaaga acgaacgcta caaaagtgat gatgttaggt tcgggcgagt tggggaaaga
    18541 agtggtaata gagctgcaac gcttaggcgt agaagtgatt gcggtggatc gttatgacaa
    18601 tgcacctgca cagcaagtgg ctcaccgtgc ttatacgatt tcgatgttag acgggaatgc
    18661 attgcgagat ttggtggaga aagaaaaacc ggattttatt gtgcccgaag tagaagccat
    18721 cgcaactgca accttggttg agttagagca agagggatat aacgtaatcc caacggcaaa
    18781 agcaacgcaa ttaacaatga atcgagaagg cattcgccga ttggcggcag aagagttggg
    18841 cttaaaaacg tcgccttatc gttttgtgga taattttgaa cagttccagc aagcgattca
    18901 agaaatcggc attccgtgtg tggtcaaacc gattatgtct tcttccggac acgggcaatc
    18961 agtaattaaa tctgaagcgg atattcaaca ggcttgggat tattcgcaac agggcggacg
    19021 tgccggcggt gggcgtgtga ttgtagaggg ttttatcaaa ttcgattatg aaattaccca
    19081 gcttaccgtt cgccatattc acggcacgtc gtttttagct cccatcgggc atattcaggt
    19141 tgatggcgat tatcgtgaat cttggcaacc gcagcaaatg tcggacattg cattgaaaaa
    19201 agctcaagaa accgcagaaa aaattacctc tgcactgggc ggaagaggga ttttcggcgt
    19261 ggaacttttt gtctgtggcg atgagattat ttttaacgaa gtctccccac gtccacacga
    19321 taccggaata gtaacaatgg catcacaaga gctttctcaa tttgctctgc acgcccgtgc
    19381 gattttgggc ttaccgattc cggaaattta ccgcatcagc ccggcagctt ctaaagcgat
    19441 tgtggttgaa gggaaatcgg ataatgtgcg ttttggcggt gtagataagg tattagccga
    19501 aatcgggacg aatatccgct tattcggtaa aggcgaagta aacggacacc gccgattagg
    19561 ggtaattctt gctcgtgatg aaaatacagt gagagcatta gaaaaagctc ggcgagctta
    19621 tgataagtta gatattcaat tataaagtca ggattttgat attcgttgat agtaggcatt
    19681 ttatgcctac tatcctatag gcctctaatc aaattggatg aaaaagttga agattgttaa
    19741 tcctctttgc cgagaatttg gttcacttcg ctcttataca atactgcttt tgctccaaat
    19801 acggcttgta caccgccacc gacttccagc acgtcaatcg caccgagttt tttcagtgtt
    19861 gctttatcca cggctttcac ctctttcact gccacacgca gacgggtaat acaagcatcc
    19921 acattttcga tattatttgc agagccaaga gcggcgataa ttttatgggc attttcagtc
    19981 agtgagctgg tttgttgttc gactacctct tcactctctt ccgcacgtcc cggtgtcatt
    20041 acgttgaatt ttttgatcag gaataggaac gagaagtagt aaagtgccgc ccacggcaag
    20101 ccgactatga tcactcgaag ccagttagtg ttctcgttgc cttgcaaaat gccaaacagg
    20161 gtgaagtcga tcacgccacc ggagaaggtg ttaccaatcg agatgttgag taagtctgca
    20221 atgtagaacg acacgccgtc taaaaaagcg tggaacacat agagccacgg ggcaacaaac
    20281 aggaacataa attcaatcgg ctcggtaatg ccggtgataa aagaggtgag cgctgcacct
    20341 aagaacagac cgctaatcgc accacggcgg gctttcggca cagcgtgata catcgctaaa
    20401 caggcggcag gtaagccaaa catcatcgta tcgaaacgtc cagcgaagaa acgtgtacct
    20461 tcggtaaata agccttgatg ggttggatcg gcgagttggg cgaagaagat tttttgcgcc
    20521 ccgataatgg tttcaccatt taccacttct gttccgccca attcggtgta ccaaaacagc
    20581 gggtagatca tatggtgtaa gccgaccgca ccgcttaacc gcattaagaa accgtagaaa
    20641 aaggtgccga tttcgcccat ttccgcaatc ccttgccctg ctgaaaccaa ccactgttgg
    20701 aaagccggcc agatcaaaaa gaacactgcc ccgacaaaaa tcgcagcaaa ggcggtcaca
    20761 atcggcacaa accgagagcc gccaaagaag ccgagaattt gcggcagctg aatgttgtgg
    20821 tatttgttat gcagtttcac cgtaatcaag cccattacca gcgagccgat cacaccggta
    20881 tcaatccctt tggtttcagg aggaaacagc ggaatgaggg cagaaatcgt gcctgtcata
    20941 atcaaataac cgaccactgc tgccagtgcc gctacgcctt tatctcgttt tgctaatcca
    21001 atgcctaaac cgatacacag taataatgca aggttgccaa acaccacact gcctgccgat
    21061 gccataatct ggaaaatgcc ctgtaaagtc gggttatcca gtatcgggta ggcttgcacc
    21121 gttgccttat tcgacaaagc tccgccaatc cctaacagca aaccggctgc cggtaaaatc
    21181 gcaatcggca gcataaaagc ttttccgact tgttgcagtt gtttgaacat aaaatttctc
    21241 cttttttatg gttgtatttg atggtttata gcatactgaa atttagccgt atgaggtgtg
    21301 atataactca cagatttgca aaatttttag caaattcgac cgcttgtaaa aaaattaccg
    21361 cttgcggaaa aattgaagta gaattaagca tttttttagc aaacacaaca taaaaaattt
    21421 ggagaagatt atgcctattt tacgttcagc aacttccact cagggtcgta atatggcggg
    21481 ggctcgtgca ttatggcgtg caaccggtat gaaagaaaat gattttggta agccgattat
    21541 tgcagtggtg aactcattca cccaatttgt gccggggcac gtccacttaa aagatatggg
    21601 gcagttggtt gcggcagaaa ttgaaaaagc cggtggggtg gcaaaagaat tcaacaccat
    21661 tgcggttgat gacggcattg caatgggaca cggcggaatg ctttattctt taccaagccg
    21721 tgatttaatt gcagacagtg tggaatatat ggtgaatgct cactgtgctg atgcgatggt
    21781 gtgtatctct aactgcgata aaatcacccc gggaatgtta atggcagcaa tgcggttaaa
    21841 tattccgact atttttgtct ctggtggccc gatggaagcc ggaaaaacta aactttccga
    21901 tcaattaatt cgcttggatt tagtcgatgc aatgatcgaa agtgccgacc cgaatgtgtc
    21961 tgatgaacgt attgatgcga ttgaacgtag tgcttgcccg acttgtggtt cttgttcagg
    22021 tatgttcacc gcaaactcaa tgaactgttt aactgaagct ttaggcttaa gtttaccggg
    22081 caatggttca atgttggcaa ctcatgctga ccgtaaagag cttttcctaa gagcaggtcg
    22141 tgaaattgtg gaactttgcc gtaaatatta ccaacaagac gatgagagcg tgttacctcg
    22201 ctcaatcgct accttcgatg catttgaaaa tgcaatgagc cttgatattg caatgggtgg
    22261 ttcaagtaat accgtgcttc atttactagc gactgctcaa gaagccggcg ttgattttaa
    22321 aatggaagat attgaccgcc tctctcgtgt cgtgccgtgc ttaagtaaaa ttgccccgaa
    22381 taccaataaa taccatatgg aagacgtaca ccgtgccggt gggattatgg gcttgctggg
    22441 cgaattagat cgtgcaggtt taatccatcg ccacgttaaa acagtgctag gtttaacgat
    22501 agaagagcaa ctgaatcaat acgatattat tcgtaataaa gatgaagatt tacacaaatt
    22561 cttccgtgca ggtccggcag gaattcgtac tactaaggct ttctcgcaag attgccgttg
    22621 ggacactgtt gatgatgacc gtgtaaacgg ctgtattcgc aatgtggaaa atgctgtgac
    22681 caaagagggc gggttagcgg tattatttgg gaatattgca gaagatggat gtattgttaa
    22741 aaccgcaggg gtagatgagt ctatttggaa attcactggc accgcaatcg tgtttgaaag
    22801 ccaagaagat gcggtagcag gtattttagg cggaaaagtg aaagaagggc atattgtgat
    22861 tatccgctat gaaggtccga aaggcggccc gggtatgcaa gaaatgcttt atccaactag
    22921 ttatttgaaa tcaatgggct taggcaaaaa atgtgcttta ttaactgacg gtcgtttctc
    22981 tggcggtacc tcagggttat ctatcggaca cgcttcaccg gaagccgctt caggaggagc
    23041 gattgcctta attaatgatg gcgatacggt ggcgattgat attccgaatc gttcgattaa
    23101 cttaatggtt tcagatgaag aacttgctgc tcgccgtgca gaaatggaag cccgtggcga
    23161 taaagcgtgg cagccgctaa aacgtgagcg agaagtgtcg tttgcactaa aagtgtttgg
    23221 acattttgcc acctctgctg ataaaggtgc ggtgagggat aaatcgctgt taaagtaaat
    23281 aaattagaaa aaagaagcat ttcaataata tattgatctg ctctttattc agctgaatat
    23341 ttaatctagc tgaatggaga gcagatcgat agcctaattt acatcttttt gttttgatac
    23401 agggaaatgt attacaagca ttttgccggt tttggcagac ctgcaatttt agtggcttgt
    23461 tttgcaggac catcaggaaa caagcgttgt aaataacggc tgttgccttt ttcttcaccg
    23521 aatttttgtg ccattgtctt taccagcatt cgaattgctg gtgaagtttt gtattcttgg
    23581 tagaaatccc gcaccagata aataatttcc caatgttctg cggttaagct aatttgctct
    23641 ttttcggcga ttttttctgc taattctaca gaccaatcat ttaaattagt taaatagcct
    23701 gaagcatcgg ttgggtattg gatattattt aattcaatcg tcatcaaata aaaatgccac
    23761 ataatgtggc attcctctta aactaaaacg ctagtcgtca ctacctagca caccgaagat
    23821 ttgtaagaag cttacaaata ggttgtagat agacacatat aaatcaacgg ttgcacgaat
    23881 gtagttggtt tcgccaccgt gaataatgtt gctggttgcc agtaaaatcg caccgcttga
    23941 gaaaatgaca aacaagctgc ttagggctaa acttaatgcc ggaattgcta agaagatatt
    24001 ggcaataata ccgactaata ataccacaaa cagggcaacc atcattccgc tgataaagct
    24061 catatctttt ttggtggtta atacataagc tgaacaagcg aagaaaacca atgcggttgc
    24121 accgaatgca agggcgacaa tatcccctaa acccgcaccg atgtaacggt ttaaaatagg
    24181 acctaaggta tagcctaaga agccggttaa agcaaatacg cttaagatac ccgcactgct
    24241 gtttgaggtg gcattcgtca agaaaagtaa gccgtaaaag ccgaccaata atccccacca
    24301 cggcatagcc ggtgcgttca tttgaattgc aacaaaagca acaactgcgg agaaagtcag
    24361 ggtcattgcc aataacatat aggtattgcg aagcactttg tgggtgctaa ttagagattc
    24421 accagttgaa tagctgtgag ctaaacgatt ttccataaaa attccttctg tttttgtgtt
    24481 taaatcggaa catccgatgg attaatatct atggataaat ttccataaat caagaagtaa
    24541 ggtagccgta atttattgta aagtcaatgc gattttgtaa cagaagagta aaaaaaaaca
    24601 tttagttgtg ttacacttaa taccactcta ctttatattc cttttcatcg atgaattcgc
    24661 tatgaagctc aatttcccaa cttatttaac cttatttcgg gtaggattaa ccccactttt
    24721 tattgtggct ttttatctgc cgacaaaata tgcgcctgaa atttcaacac ttattttttt
    24781 tattgcatcg attaccgatg cctttgacgg ctatttagca cgcaaatgga atcaaaccac
    24841 ccgacttggt gcatttttag atcctgttgc ggataaagtc ttggtagctg ttgcgtttgt
    24901 ctgcgtggcg gagtattacc atacttggtg gattactatt ccaatctgca ttatgattgc
    24961 ccgtgaaatt attatttcgg ctttgcgtga atggatggcg gagcttgggg aaagggccag
    25021 tgttgccgtt tcgatttggg ggaaagtaaa aacgactgct caaatgctcg cattaggtgg
    25081 aatgttatgg agacagaacc aactaatgga gattttagcc tttattctgc tttatattgc
    25141 agtgggttta acgatctggt ctatgatgca gtatttaaat gcttcaaaga atagtctatt
    25201 gaagtcataa gcggtcatat ttttattctt ttttgcaatt tgtagagtgg aaatatcgct
    25261 ctacaatttt caattttatc aactctaatg tctgaattta acgctaaatc cttcctgtta
    25321 aatgtgcctc accaaccggg tgtttatcgt atgtatgata gtaaaggcac gataatctat
    25381 gtgggtaaag ccaaagattt aaaaaagcgt ttagccagct attttcgtag ccaactttcc
    25441 agtaaaaaaa cggaagcctt ggtggcaaat cttgctaata ttgaaacgac gatcactcat
    25501 tctgaaacag aggcgttact ccttgaacat aattatatta aggaaaatca gccgaaatat
    25561 aatgtgttgc tcagagatga caaatcttat ccttatattc tgttaactaa acataagcat
    25621 cctcgtttaa cagcatttcg tggtagtaaa aagatcgccg gtgaatattt tgggccttat
    25681 ccgaatgtta cggcagttcg ggaaacactg aatttattgc aaaaaatttt tcctattcgt
    25741 cagtgtgaag atacttatta taaaaaccgt tcacgacctt gcttacagta tcagatcgga
    25801 cgctgtttag ccccttgtgt agagggctgt tattcacccg ttgaatacga tcagcaggtt
    25861 aatttggttc gtttgttttt acagggaaaa gatcaccaag tagtcgagca tctggtacag
    25921 aaaatggaag atgcggcgga ggctttggat tttgaaggtg cggcacgttt tcgggatcaa
    25981 attcaatcag taagagcggt gcaagaaaaa caattcgtct ctaatgatag gctagatgat
    26041 cttgatatta tctcgatcgt ttatcaaaat gggattgcct gtgtgcatat cttatttgtt
    26101 aggcaaggta aggtactagg caatcgttct tactttccaa aagtgccaag taatacagat
    26161 ttaaccgagc tcgcagatac ctttgtcggt cagttttatt tacaaatgaa ccagcaccgc
    26221 accataccta accaaattgt aattgatcat caattaagtg aatctaaggc actcagtgaa
    26281 attttaagtg agcaagcagg gcataaagtc agcattttag ataatgccat cagaggtgat
    26341 aaacagcgtt atttagcttt agcgagaact aatgcaatgg cagcattagt tttacaactt
    26401 aagcaagaat cccatattca aagccgttat caggcattga aagaaatgtt gaaaatgtca
    26461 gagattaaaa gaatggagtg ctttgacatc agtcatacaa tgggcaacca aacagtggct
    26521 tcttgcgtgg tgtttgatga aaatgggccg ctaaaatcgg attaccgccg ttttaacatt
    26581 gaggggatta ccggaggtga tgattatgca gcaatggagc aggctctctt gaaacgctat
    26641 aatcgagaat taccgccaga aaagatccct gatattattt ttattgatgg tggcaaaggg
    26701 cagttgaacc gagcgttaga tgtcttcgct aaacttgatg tggaatggga taaatcgaaa
    26761 ccgcttttaa ttggtgtggc aaaaggcgta gaacgtaaag ctgggctgga aactttaatt
    26821 atcagcaaat gggataaaga aattcactta ccgccagata gtcttgcctt gcatttaatt
    26881 cagcatattc gagatgaatc ccaccagcat gccattagtg ggcatcgtaa aaaacgccaa
    26941 aaggccttta ccgaaagtgg attagaatct attgccggtg tcggtgcaaa acgccgacaa
    27001 gcgttgctaa aatatttagg cggaatgcag ggggtgaagt ctgcaacctt ggaagagatt
    27061 caatcagttc cgggaatttc taaagcgttg gcagaggtta tttttgatac attaaaaaat
    27121 agttaaatta tcaatagcga tatcgcttcc agccgtaatg gtagcccact cctatgcttg
    27181 ggtaaattat agggtgaatt ggcagattta tgctttctga gcgtttatcg ctttggttta
    27241 atggctcatc atgttgcttt gtatttttat caacagtttg cttattgatt actcgttgat
    27301 ggtaatcctg aactgcttgc atatccattg gtactgtgct ttgttgttgg ggtgtcgaac
    27361 aggcggttag tgcaacgctc aatccgagta aaattaattt tttcatatca tttccttata
    27421 ttgcaaaata ttttgctttt ttgaccgctt attttgctat taattcttaa aaagattatt
    27481 ttatccataa aaaaggacgc actaggcgtc ctcatttcta ttctttaaaa ttaaagagca
    27541 gattttgctt tttcaactaa agctgcgaaa gcaactttgt caaatactgc gatgtcagct
    27601 aagatcttac ggtcgatttc aacagatgct tttttcaagc cgttgatgaa tttgctgtaa
    27661 gataaaccgt tttgacgagc tgctgcgtta atacgagcaa tccataattg acggaattga
    27721 cgtttacgtt gacggcggtc acggtaagca tattgagcag ctttaactac tgcttggaaa
    27781 gcaacgcgat acacgcgtga acgtgcacca taataacctt tagcagcctt aagaactttc
    27841 ttatggcgtg ctcttgcaat aacaccacgt tttacacgag ccattattta atctcctaat
    27901 tgtctatttt gattggtggt cgtcatcacg acctttacta agaattctat ccgtacgtcc
    27961 gtactttact acactacgct aacctaaaag gcttatgcgt atggtaagca cgctactact
    28021 aaaacttggt cagctttcgc taccattgat ttgtgacgta attgacgttt acgtttagtg
    28081 gttttcttag tcaaaatgtg acgtaagtga gattgtttac gtttaaaacc gccggaagct
    28141 gtttttttga aacgcttagc agcaccacgt actgttttaa ttttaggcat tgttaaaaaa
    28201 ctccgcattg tttgttagat attatgaaaa taaggcgaat tttgtgaaca aaattacttg
    28261 gaagcactta ttctccgcta tacgattttc atcgttaaaa agtcaagcag gctgctgagt
    28321 ttgcctgttg agcattttct ctttcttggc taggcaaaaa agcttgcgaa ttttagcgaa
    28381 aatataaccg ctatgcaagc caatttaagc tttatcaaga aaaaagcaca ttaaaacaat
    28441 gtgcttatcg aaattatttc ttcttaggtg cgatcaccat cacaacttgg cgaccttcca
    28501 atttgcctgg ggctgactct accattgcaa tttctgcagt atctgctttg acacgttcta
    28561 aaacgtccat accgatttct tggtgagcca tttcacgacc acggaaacgc actgtgattt
    28621 ttactttatc cccatcttct aagaaacgga taatgctacg aagtttaact tgataatcgc
    28681 catcatcagt tcccggacgg aatttgatct ctttaacttg aacaactttt tgttttttct
    28741 tttgttcttt tgctgctttc tctttttcgt agatgaactt accatagttc ataatacgac
    28801 aaactggtgg ttcagcattt gggctgattt ccactaaatc caattcagct tcttctgctc
    28861 tatttagagc atcttgaagt gatacaatac caacttgttc gccgttttca tcggttaagc
    28921 gaacttcttt tacgccacga atttcgtcat taagacgatg tgcacgattt gattgaacac
    28981 gttttacagg tttaatagcc ttattccttc tagtaaattt ttgcttaaat tttaccgctt
    29041 gagagcgtat aaatatttta gattgcttgt tttaagtgat taaaaaacag ctaaacgtgc
    29101 ggattctata agattttcag tgcttatgca ataataaagc ccttatttaa ctgcctattt
    29161 tcggttattt tgatattctt tgattaaact cataaatgct tgcccaaatc gttcaaattt
    29221 tcgttcacca acaccattaa tttctaacat ttccactttt gaagtcggga gaaattctgc
    29281 catttcttgc aaggtggcat cgttaaagac gatataaggt ggaatatttt cgaggtcagc
    29341 tatctgcttg cgtaaaaaac gtaagcgtgc gaataggtct ttgtcatagc gatgacttgc
    29401 ttgtttttgc acaaatgcag tcgcagatat acctaaacgt ggcaatgcaa gctgaagttg
    29461 cttttctcca cgcaaaaatg gtctggcact ttcggttaat tgcagagcgg aatggttagc
    29521 aatattttga ataatcaacc ctaaatgaat cagttgccgc accacatttt gccaataatg
    29581 ttggctttgt tcttttccga taccataaac ggaaagttga tcgtgttgat gttcacgaat
    29641 tttgagattg ttcattcctc gcaataccgc aataatatgg tgctgaccga aaatttgacc
    29701 ggtgcggtaa atcaccgaca tcactttttg ggcatcaagt aagccatcgt attgttgcgg
    29761 tggatctaaa caaatatcgc agtttttgca ttgctcttgg cgatgttccc caaagtagtt
    29821 gagtaagact aaacggcggc aagtctgtga ttcggcgaaa tcgccaattg cctgtaattt
    29881 atgctgttta atatttctct gttcgctttc cggctcttcc aataatattt tttgtaacca
    29941 agcataatcg ctaggatcat aaaaaagcac ggcttcagaa gggagatcat ctcgcccggc
    30001 tcgtccggtt tcttgatagt aagattcgat agagcgaggt aaatcgaaat gtaccacaaa
    30061 acgtacgttg gatttgttga tccccatacc aaacgcaata gtggcaacca caatttgaat
    30121 atcatcacgc tgaaaggcat tctgcactcg ttctctctgt tcaaaactca taccggcgtg
    30181 atagcccatc acgctgattt tacgggctga gagtttctcg gtgatttctt ccactttgtt
    30241 gcgactgttg cagtaaacaa taccgctttt gccttgctgt ttgctgatga atttaatgag
    30301 ctgttcaagc ggtttaaatt tttcctgcac ggtgtagcga atattggggc gatcaaagct
    30361 gcctaaatag atatgtgggc tatttaagcg taaatgatgc agaatatcgg agcgggttgt
    30421 tagatctgcc gtggcggtga gtgccatcaa cggcacattc gggaaagtgt ttcgtaagcc
    30481 acctagcagg gtatattcag ggcggaaatc gtgcccccat tgggaaacac aatgggcttc
    30541 atcaaccgca ataaagctga ttttacatag cgaaataaag tggaaaaagc cttgagtcat
    30601 taccttttca ggggaaagat agagtaattt taattgaccg gataaggctt tttgttccac
    30661 aagttgctgc tcttcgagcg tttgagtgga gttaagataa gctgcttcaa tgccgttggt
    30721 gataagttga tccacctggt ctttcatcaa cgaaataagc ggcgaaatca ccaaagtgat
    30781 gccgtctagg cacaaagccg gcacttggta gcaaagggat ttgccaccgc ctgttgtcat
    30841 aatcacgagg caatcacgat tttccaacac ggcattgata acttcttctt gcccgtctcg
    30901 gaatttttga tagccaaaaa tattatttaa aacagaaatt gcggtggtgt tcattggtag
    30961 ttggttgcta cttatgatag tactcgtctt ctgagagtat cttttaaaat gaaaataaag
    31021 cactcatcaa agacgagtgc tgtcttagtt aacaattagg cattagaaag aaacgctttc
    31081 tccgtgtcga gcaaaagctt cttctaaatg ttgccagaac gagcgacctt catctgttac
    31141 ccattcgcct tctacatttt taaagtggaa accacccaat ttgctggcaa gccataattc
    31201 cagcattgcc tcttgtttat taatgataac ttgcgattca tcatcaaagg ttaaggtgca
    31261 gaccgctcct tggatttcag tatcgactga taatccttcg tcataaattt tttcttcaat
    31321 ttgttgccat acttgctcta cggcttggtg gaattgtgct gtgttcattg gtgtatcctt
    31381 atttgaatgt tatataagta gtaaatactt tttgttttag ctgtttaaat ggtctgtaaa
    31441 gttctttttg tatttttgtt aagaaataat taggcttttt aagtttagct tgatttttta
    31501 ttttatcctc attattacaa cgaatagctc tatcatcctg taatgagctt ttaaaattag
    31561 ttttactatt taaaataaaa tc
//
LOCUS       DANMCL010000020        31359 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.020, whole genome shotgun sequence.
ACCESSION   DANMCL010000020 DANMCL010000000
VERSION     DANMCL010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 31359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31359
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.020"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..895)
                     /locus_tag="PXF40_000824"
     CDS             complement(<1..895)
                     /locus_tag="PXF40_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5802192.1"
                     /translation="MSKIEFEKIPNSIRKPSVLTEYNNKDAVTTLPTNEQEVLIVAPM
                     LNGEAAFTAPQKIFSDVEAENLFGKGSVAHLMVRQAIQNNPLIRLTVVGLKDHEAGIA
                     ATGQVSFTGTVTYAGVVRITIAGTAYEVAAAKGEEAQAIVARLVNVINAASYSPVVAS
                     VESETTLKLTSKAKGEISNEITLATRNTATGLTLEARAFDNGQRNALIAPALASVAGT
                     HYNVIISPFSDDENALALRSHLESVSAPIEDKPAIGVMGWRGTYATGTTLTASLNSER
                     IIVGWYKGATESNAMIAAGLGA"
     gene            complement(895..1074)
                     /locus_tag="PXF40_000825"
     CDS             complement(895..1074)
                     /locus_tag="PXF40_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HDL5802193.1"
                     /translation="MLKVKAAKGVRVPVENRPHHYIEQEAVEVENTLYYQRRIADGDL
                     IVVKETKSAKETGGK"
     gene            complement(1075..1716)
                     /locus_tag="PXF40_000826"
     CDS             complement(1075..1716)
                     /locus_tag="PXF40_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HDL5802194.1"
                     /translation="MISKIERALIERLTLGLGKMVYAVAGYAGEINDEKLDVLRLPAC
                     LVSYGGSAFEAKSMGVRGKRYQATDVFVVLVITRSMRNQTAGRLGGVTSREVGVNQLL
                     GAVKTLLINQTLDGLVHPIQPKRIRTIWNNAEVKKEKLSAYAIEFEISYNECNVLDDG
                     RFPEGVEPNEQVFKQYQGKLDEPQGDLSGFNNRIFDPNNNAETAFRTEFKDGD"
     gene            complement(1713..2138)
                     /locus_tag="PXF40_000827"
     CDS             complement(1713..2138)
                     /locus_tag="PXF40_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 domain-containing protein"
                     /protein_id="HDL5802195.1"
                     /translation="MYALVDDFVLRIGEQESIELTDREMVGVVDEATLEVALADSSSQ
                     IDGYLSGRYRLPLKTVPQNLKRICCDLARYHLTSKSLVTMTEEVENRYKLCLKELENI
                     SKGVVSLAVDETNEEESATGENTVQFFNGGNRIWGRDKR"
     gene            complement(2138..2479)
                     /locus_tag="PXF40_000828"
     CDS             complement(2138..2479)
                     /locus_tag="PXF40_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802196.1"
                     /translation="MAKPKKNDNEALNTNENTPLEDKVNEQPEDKTDEQPKPPESETK
                     PDDGALINPIAFEVKLKSIHPQATYGRCGYRFNKETAVEIARKALSDEQIITLANDPY
                     LEFVPVVEGDA"
     gene            complement(2527..3444)
                     /locus_tag="PXF40_000829"
     CDS             complement(2527..3444)
                     /locus_tag="PXF40_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HDL5802197.1"
                     /translation="MFKKSELLKALDTAFRKEFSAGLKVLEPQWGTVAMKVSSSTATN
                     TYAWLGQFPKMQEWVGDRQIKNMQAQGMTIENKLFESTVAVPRTAIEDDQVGLFTPMV
                     KQAAQSAAELPDDLVFSLLKKGKTTLCYDGQNFFDTDHPVYQNVDGTGTSKTQSNITT
                     GSASGKPAFYVLDDSQAIKPLIWQERTTPEIETKFDPSESDHVFMKDQYLWGVRARGN
                     AGFGFWQLIHRVEDSELNSETLEKVLTAMRTLKGDGDKQLNIRPTTLLVPPSLEFAAR
                     KLLEAELIDGTTNTLKGVLKVVVNPFIAE"
     gene            complement(3444..4514)
                     /locus_tag="PXF40_000830"
     CDS             complement(3444..4514)
                     /locus_tag="PXF40_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HDL5802198.1"
                     /translation="MFKHKFKLNPIALSFKLNQEANGRIQLFPFGWFEAQDGRGGRWY
                     VGDENGYALADDINNTAIDLMIDYEHQTLYIAENGKGNPAAGWITKAEYISGEGLFAD
                     VKWTPQATQEIKDGVYRYLSPLFLTDGSGMVIKVLNAALTNRPALHNLQEVVAMSSQF
                     AKFLTPEEENPKMKELLIKLFALSANATDEQITEKLTALEKAKGDSPVALSDVYTELA
                     KEKSQVVALSAKVNHPDPAKFVALSDLQAVQTELNGLKQQINDKERDALIQTALSDGR
                     LLPAQKAWAEKLGKQDLVALSDFLKTVTPNPALASTQSGGEDPNKGTEKVALSAAEIA
                     AAKSLGLSEAAYIEKYKTEESK"
     gene            complement(4773..5189)
                     /locus_tag="PXF40_000831"
     CDS             complement(4773..5189)
                     /locus_tag="PXF40_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HDL5802199.1"
                     /translation="MIEIQIHGIDEIIATLNRIAAKTANKTDLMRNIAGKMESAVLTN
                     FDEGGRPKWLGIKHRQGTPLVDTENLMGSITADYNNDSAIVGTNEPYAAIHQFGGMAG
                     RGRKVKIEARPFLQLTSQDRQDILDDVQAYWQKLLD"
     gene            complement(5340..6639)
                     /locus_tag="PXF40_000832"
                     /pseudo
     CDS             complement(5340..6639)
                     /locus_tag="PXF40_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
     gene            complement(6626..8251)
                     /locus_tag="PXF40_000833"
     CDS             complement(6626..8251)
                     /locus_tag="PXF40_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HDL5802200.1"
                     /translation="MSKKKHNKQIKPNLNPIKNQELQTDLAEITATGRVLSDHPSNFI
                     TPAKMKAIFEDTENGDITAQHELFMDIEERDSSIFANIQTRKRAALGVDWAIVAPRNA
                     TPQEEKLRDEVDELFYQLGNLEDLVMDCMDAVGHGFAALEIEWAFNGKLWYPNAFIHR
                     PQSWFKWDKHDNLLLKTRQNTEGEPLREFGWVVHTHKSRSTQAARNNLFRSLAWLYMF
                     KHYSIHDFAEFLELYGMPIRIGKYGAGATPNEKQTLKRALAEIGHNAAGIMPESMSIE
                     LHNAANAGGAAGNNPFLQMVDWCEKSIARLILGQTLTSGADGKSSTNALGNVHNEVRR
                     DLLVSDVKQLGQTFTQQIILPFLQINFGNIDPTRIPSFEFDTKEPADLALFAESLPKL
                     VDIGMPIPVQWAMDKLGIPEAQENEAVLGRSAPPQAVGLSANFPQKMTACECGCGGKV
                     HALSAQTKTGIKEQDALDDLADEAFSVPDFNAQFDPITKKAVAVVMACSSYDEAAEKL
                     AAAYPDLVSEEHDRYLANALFLADLLGAANAES"
     gene            complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXF40_000834"
     CDS             complement(8320..9945)
                     /gene="terL"
                     /locus_tag="PXF40_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5802201.1"
                     /translation="MKIKEFEKELEELRRQLQQNIEASFEGWDDKPQAISERRQKVLD
                     PVHGFEYFVQAYFPHYVRSEHKSQLHHYLFENLPLSVSDLSKSVRQAIAAPRGEAKST
                     ICTQLFPLWCLVRDLKRYIIIAMDTKEQAYSMLEAIKVEIESNPRLRIDFPEVAQGKV
                     WRAGVIMTAKKQKVEAVGAGQKLRGRRHGAYRPDLVVLDDIENDESVETPAQRNKLHN
                     WVLKAVLKLGAAGEKFDVIYVGTILHYDSVLSRILNTKGWRRVRFKAILRFPGNMALW
                     DEWENIYLSEEGDDDTMSDLFYQQHKAEMDKGALVSWLARPILYLMKIRASDGHSAFD
                     SEYQNDPVSGDDAIFANSIQYWTELPDDLIYFGALDPSMGKAGASRDPSAILVGGYHR
                     ESGKLYVVEAQIKKRLPDLIIEDVIRLHSQYNCHRWFVETVQFQEFLQTELVKRSAQR
                     GKPVPATATKPNSDKMLRIESLQPHIANGLILLHRSQSTLESQLRHFPKADHDDGPDA
                     LEMLWRNALSSSAPIEWESVDDFDGEYRSKWRH"
     gene            complement(9949..10095)
                     /locus_tag="PXF40_000835"
     CDS             complement(9949..10095)
                     /locus_tag="PXF40_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802202.1"
                     /translation="MAKKKQTVVHKHYSFRWIVQLACIFGAIKLMLNGTDGWGWLLLI
                     AACM"
     gene            complement(10095..10595)
                     /locus_tag="PXF40_000836"
     CDS             complement(10095..10595)
                     /locus_tag="PXF40_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HDL5802203.1"
                     /translation="MAHDVEVQKAVRQAYVFDRLSLEMAAERAGVSFGTARRWKAAAE
                     KNGDNWEKARDVQAMASGGIENIAQGLLAGFLIKYRTLMTELEENTEMPTAAKVEALA
                     ALADSFAKMTASSKKLLPETSAMATAMRAIEMMANIVKTKKPHLLPDFLEMLDELEVQ
                     FKKEFK"
     gene            complement(10603..10857)
                     /locus_tag="PXF40_000837"
     CDS             complement(10603..10857)
                     /locus_tag="PXF40_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802204.1"
                     /translation="MSRKKQKQTDSEKLDLILGGLNELNDKVDKQNEEIERLHREIQA
                     TNRLVNEMARKNRRDAVVAGGLGGGIVAVGFELLRLKFGM"
     gene            complement(10857..11114)
                     /locus_tag="PXF40_000838"
     CDS             complement(10857..11114)
                     /locus_tag="PXF40_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802205.1"
                     /translation="MIDEKLFQMLISFVVAPLVAFVGKVIFDRINRNEQTVKELKAEM
                     ESKYQSKELAHEVNRGIKEKLDDILDSLKEVNQKLDKKADK"
     gene            complement(11107..11262)
                     /locus_tag="PXF40_000839"
     CDS             complement(11107..11262)
                     /locus_tag="PXF40_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802206.1"
                     /translation="MKLIKKLRQRWQQWRFYRRRPDLAELHNVVRAAVAQGNQHPVGR
                     AKRGRYD"
     gene            complement(11277..11636)
                     /locus_tag="PXF40_000840"
     CDS             complement(11277..11636)
                     /locus_tag="PXF40_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2681 domain-containing protein"
                     /protein_id="HDL5802207.1"
                     /translation="MITQQIAGVVGVVSTILAYAFYKSWQLKQERKLTATLKAEKQQQ
                     AVEIQQKNAEVKNAKIQQKHVSETRRIQPSAIDEQLHQHGYFRDDNGLHGVRSDLPEP
                     CGHNGNETPSACTQSDL"
     gene            complement(11633..11878)
                     /locus_tag="PXF40_000841"
     CDS             complement(11633..11878)
                     /locus_tag="PXF40_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2644 domain-containing protein"
                     /protein_id="HDL5802208.1"
                     /translation="MKQFLLDLITNKDGTASTTGFIQFMSWLVLSGILIHAYLYDKPF
                     ISDWWFAYAGICVLGSPATKGVVSALKQKERSREAEE"
     gene            complement(11881..12414)
                     /locus_tag="PXF40_000842"
     CDS             complement(11881..12414)
                     /locus_tag="PXF40_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HDL5802209.1"
                     /translation="MTEPIKNKATIADFNLAFDRLIGHEGGYVNDPKDPGGETNWGIT
                     IHTARANGYTGSMRAMSRADAKTIYLKAFWQRYNCEQFPPELAFQFLDACVNHGSGNA
                     SRMLQRAVGVADDGIIGKVTLAAIERYSVADVGLLFQAERLEFYTKLKHFDRFGRGWI
                     NRMAGNLRYFAKDTVEE"
     gene            complement(12500..12925)
                     /locus_tag="PXF40_000843"
     CDS             complement(12500..12925)
                     /locus_tag="PXF40_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HDL5802210.1"
                     /translation="MSEFESVEHYLPETVKEIVGVIGLPATEKLIKAFGGFSFQFSNG
                     KLYFNKLKEVLGQDDAVKLQAYMGACEVYLPRCETALRMLRNQQIYADYCQLTEQGGL
                     SGRLAIMQICPKYSVCDRVAWEAVRYYQRKHTVSQATLF"
     gene            complement(12996..13211)
                     /locus_tag="PXF40_000844"
     CDS             complement(12996..13211)
                     /locus_tag="PXF40_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5802211.1"
                     /translation="MIENPEFGYTPSNLKMLRKHHNLTQTEVANILGVGQRIVMRWET
                     ELSSTAARSDMPYTKWAELLKNLQKNF"
     gene            complement(13230..13622)
                     /locus_tag="PXF40_000845"
     CDS             complement(13230..13622)
                     /locus_tag="PXF40_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802212.1"
                     /translation="MTDYQKLLNALLNDADEDCFAVYGLRATTDVHQVGDELGNSFVW
                     VDGEKTDEELDGICTMGIQNADEAGLLNAIKNLGRDACKKFDVEFKGFQSYCGQNFIL
                     VKGDSARGGEDKGESIIRNPIVVAVFNS"
     gene            complement(13748..14095)
                     /locus_tag="PXF40_000846"
     CDS             complement(13748..14095)
                     /locus_tag="PXF40_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802213.1"
                     /translation="MKELLLTTLCLLSLPAIAMTEKAEQETANALVSGDYQQLRNVAY
                     GMETGSFGHDHNPIAACALRRVILLVNSDKVDMTDFNNEAIACRKIEVTDNQQAWETA
                     FTIAKSISATKKK"
     gene            complement(14184..14609)
                     /locus_tag="PXF40_000847"
     CDS             complement(14184..14609)
                     /locus_tag="PXF40_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulatory protein GemA"
                     /protein_id="HDL5802214.1"
                     /translation="MQPQTRKQMIQKIHIGKNELKLDDNAYKMLLLEAVDKPSCSMMT
                     DSELMTVLQTMKAKGFVVKSKKYGKRPTASKTAPHRQGLINKIGALLYQSQKPWDYAH
                     AIAKRSFGIERVQWLTDDQLHKLVQILASYNHRHGMSVK"
     gene            complement(14593..15147)
                     /locus_tag="PXF40_000848"
     CDS             complement(14593..15147)
                     /locus_tag="PXF40_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802215.1"
                     /translation="MKLCKCPICHSDISFEALIEDDAGRELLNTIVNIGGNCGRAVVA
                     YLGLFKPQKNSLANSRALKIVQSLLELYPPSNVLEKALMDTVEQVRRNRRETGRCEPL
                     ANHNYLKKVYESVKPQFAVVRSEAKAVSSLEQQQRQADQKKHDAVMYVERMKQMGQLE
                     AVKNTESYQIWLKWQEEKQNATAN"
     gene            complement(15147..15317)
                     /locus_tag="PXF40_000849"
     CDS             complement(15147..15317)
                     /locus_tag="PXF40_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802216.1"
                     /translation="MEYQKIPEYRLCKKKSGEIVLQQLVICELTPATWHNPYPDSRTY
                     WVDLETIEEGTE"
     gene            complement(15388..15963)
                     /locus_tag="PXF40_000850"
     CDS             complement(15388..15963)
                     /locus_tag="PXF40_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5420 family protein"
                     /protein_id="HDL5802217.1"
                     /translation="MKFRFFKGDITQEPLKSIYADYQVSKEERKDKLNAILEKYPFND
                     GLISRSGWFHRIVIGIACKATNISQVLDVKGFKVGKFNDEFYLVKPDKRYEKGKELAE
                     DFKAINEIYEKHRDFSPYILKRLNMLYFVSDFSYSPTSGRSYLAVAGICENTLLVEMP
                     MPIDKNDEPFPEIAEGLVEIKESEFLAIQGK"
     gene            complement(15986..16168)
                     /locus_tag="PXF40_000851"
     CDS             complement(15986..16168)
                     /locus_tag="PXF40_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802218.1"
                     /translation="MTEQEKNELNSQLNEALMQIIQAQKYLKQSDFIRSGVYLGTVQD
                     LLPKVHLKLLTANRKH"
     gene            complement(16235..16381)
                     /locus_tag="PXF40_000852"
     CDS             complement(16235..16381)
                     /locus_tag="PXF40_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HDL5802219.1"
                     /translation="MKTEQKATEFDRYKHYAEKAAEAERKGNYAEAQDHWKVAKLSAK
                     KTAN"
     gene            complement(16492..16698)
                     /locus_tag="PXF40_000853"
     CDS             complement(16492..16698)
                     /locus_tag="PXF40_000853"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802220.1"
                     /translation="MFITFNVNYTDKPVVVNTDKVCSIENINGNVTVHFCDNKKLIMM
                     DFDDKEYASLLNHLHILNQLKRKS"
     gene            complement(16700..17317)
                     /locus_tag="PXF40_000854"
     CDS             complement(16700..17317)
                     /locus_tag="PXF40_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3164 family protein"
                     /protein_id="HDL5802221.1"
                     /translation="MSKVTIGNEIYWKDADGNLKPEALVKEIDKERDELVRQFVSKAQ
                     ALSKALGDFKQSVFDDVGAFVSLSADKYGVKIGGAKGNITLFTYDGEYKLQLAVQENI
                     RFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEID
                     DARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDMAGV"
     gene            complement(17330..17521)
                     /locus_tag="PXF40_000855"
     CDS             complement(17330..17521)
                     /locus_tag="PXF40_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802222.1"
                     /translation="MKKRRMIYALYVGEENVADGTAEELAERLGVEAKTVRFMSSPAH
                     NKRVKYNGKAIRTVKVGLE"
     gene            complement(17524..17844)
                     /locus_tag="PXF40_000856"
     CDS             complement(17524..17844)
                     /locus_tag="PXF40_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802223.1"
                     /translation="MQKVYSEKAGEMMNPLNAFIHDSLVKLEIATLECEAMELEVERV
                     EFEAKSPPRLVLRDNCKTQDLVKNGLASLFGMKTKGGRRYDSYQMQVRGVKCVWESER
                     VTKV"
     gene            complement(17855..18736)
                     /locus_tag="PXF40_000857"
     CDS             complement(17855..18736)
                     /locus_tag="PXF40_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5802224.1"
                     /translation="MKNQELRALMDSKGYQQKQVAQLLGVSVATVSLYLKGDYNGNVA
                     EMDRKVDELIERDKAKVVEAKYNAAFVPTLAARRGMEVMQFAHIEGEINVIFGAAGLG
                     KTQMLKEYERRNSSATLIEVDPSCTPKVLLRKIAEAVGANARGVNNELLESIVNKLKG
                     SERLLMIDEAELLSTRSLEFIRRIHDLTSVGVVLAGMPRLLVNLKGKNNELAQLYSRV
                     GFACDLGNALSEEDLGLLAESALGTNEFNAPLIKACHGNARRLSKLMRGVVRSSEINQ
                     TPISKDLVEQYSKMLIS"
     gene            complement(18740..20677)
                     /locus_tag="PXF40_000858"
     CDS             complement(18740..20677)
                     /locus_tag="PXF40_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5802225.1"
                     /translation="MKDWFSAKELAGISGLSKYPTNVTRQAKKEQWATRPLKGVKGGG
                     FEYHINSLPTEVQTEIRSRFMSAVVEAKPKKLPVVRAEVDVGNLTTKQREIADARMAL
                     VAYVLELEGSMSRIKAITYLCNLAKQGEMPPHLAELVAVANAKKTAKRTLSVRTLNGW
                     VVDYCKAENAEQRLKLLAPQVRQETKPEEIWWLSAFLGVYRQKNGICLTEAYREFEVE
                     WAYQYADNPLLLAQCPSLSQVQRAMNKLPLYVKEYGRRTGSHYKQLLSYVKRDWSVLR
                     ANDVWIGDGHSLKLKVAHPIHGKPFTPELTMIVDGAGRKVVGWSLALSENAFAVADAL
                     RHAISLHGVPAIYYSDNGGGEKNKFLDAEITGMLPRLGIRHETGIAGNPQGRGIIERL
                     NKTIGMTIARQFETGYATGADPETVRKTLYAVNSLANAKGELTPLQRKAQGKLPTWQQ
                     LIEVIQSVIDWYNNEHIHSEIRTTPARKYQQMLHAEDVVMLSPIELRDMSRPEFIRKP
                     DRGWVSWNNNHYFNLKLLDFDREEVVIGIDIHNAESVQVRTKDGRFICEAIWNGNTRE
                     AFPVAMVEQQRKERHKRRANLKQQQLDEINAELNPVLTIEQKNDFSLLATARKPKKEV
                     EPIFLTRAEKEDYEKKLAVGG"
     gene            complement(20692..20919)
                     /locus_tag="PXF40_000859"
     CDS             complement(20692..20919)
                     /locus_tag="PXF40_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5802226.1"
                     /translation="MNKKKRAQDMHRADIRAELMKKGITFSQLGIENGLSKTTVRNAL
                     DKPYKNGEEIIAKALGKTPAEIWPSRYPDVA"
     gene            21129..21857
                     /locus_tag="PXF40_000860"
     CDS             21129..21857
                     /locus_tag="PXF40_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802227.1"
                     /translation="MKSFDKVWFSAKELEELDLPDLPKQATNITRKALKELWIKRDAV
                     GVKGGGNEYHITSLPRKAQEALGFKSGINAIKDSIVREITPEEQNKGSELSGTVLNNI
                     ISMIDSFASIKVSAGFGSFNEGVTKPDGQEPYADSLLHTLGVNAKKCAVFWASGDSMY
                     PTIDNGDQLLVDLSRNEIRGDNNIYIVQNGDSVWVKRVKLLWDGVELISDNREEYELI
                     KITADQAQNLQIIGQVVHIGHSLV"
     gene            complement(22142..22579)
                     /locus_tag="PXF40_000861"
     CDS             complement(22142..22579)
                     /locus_tag="PXF40_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HDL5802228.1"
                     /translation="MLSLFDAGQRYLNTLPNQKKLANFMPDYHIIRLVKFSSKVMPAF
                     ACFALVWQYCFTDPTQSILANSVLTAVFAISIPFQGLYWLGKRARSPLSLSLLEWYES
                     LRQKLISAQVKLEETQAVPSFQDFANLLKLAEETWGDEYFDEL"
     gene            22650..23459
                     /locus_tag="PXF40_000862"
     CDS             22650..23459
                     /locus_tag="PXF40_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802229.1"
                     /translation="MAQALLYFTTKYLQSIEGYFMSIKFVDLLQQSWNFMRNQQAFSL
                     FAIVTIVVVQLVFILVSPNSPELMAESQPQQLQIDASKMVSILLPTILLGVVNLLINV
                     LMIFNIQSINDGNYRQFFQNAGNALKHFLPVLLLQFVMVLPLSLGASFAMASPETVII
                     ALPVLVVGFYFFIKLSLVIYAYLLEKPQKSLSESIKFTLQLSRGKMLPLILFCVISYL
                     LPGMLSRLFTVFGNDFIGIFITIVLSAVINVFMAIFSFRFYQVYRQMPAVR"
     gene            23468..24025
                     /locus_tag="PXF40_000863"
     CDS             23468..24025
                     /locus_tag="PXF40_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HDL5802230.1"
                     /translation="MKQLLEFIPLILFFVVYKMSGIQMASIALVIATIVQMIALKMLY
                     GKIEKQQIIMGGSVVFFGLLSAYFNEVKYLQWKVTIVYALFALVLLVSQFVFKTPLIK
                     KLLGKEIQLPEAVWNKINFGWAVFFLICMLLNIYISQYLSEEIWVDFKSFGIIGLTLV
                     ATVITGFVLYPYLKDAEKQEQKNER"
     gene            24015..24479
                     /gene="yciA"
                     /locus_tag="PXF40_000864"
     CDS             24015..24479
                     /gene="yciA"
                     /locus_tag="PXF40_000864"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HDL5802231.1"
                     /translation="MKDKPYGKAPEGKLILRTLAMPSDTNANGDIFGGWIMSQMDLGG
                     AILAKELAKGRVVTVTVDKMIFHRPISVGDVVCCYGKLMHIGRSSMQVKVEVFIKQVY
                     EGNRERYLVTEALFTYVAIDKEGKPRAVPRENNPELDEALSLIDLTPEKQGE"
     gene            24481..24762
                     /locus_tag="PXF40_000865"
     CDS             24481..24762
                     /locus_tag="PXF40_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HDL5802232.1"
                     /translation="MYYVIFAQDNPNMLEKRLEVRPAHLARLEKLQAEGRLLIAGPNP
                     TEDGSSVTGSTVIAEFNSLEEAQQWASQDPYVEAGVYSDVIIKPFKRVF"
     gene            24934..27825
                     /gene="glnE"
                     /locus_tag="PXF40_000866"
     CDS             24934..27825
                     /gene="glnE"
                     /locus_tag="PXF40_000866"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HDL5802233.1"
                     /translation="MLTTLIPLSQLNLPPNLQNSEQIQPLVTAISLSNFVHQTLQKQP
                     DLLAEWLAKFPTPDDCCNYTERLAKILARVENEEMLGRVLRQFRHRELARLSFIQSNK
                     LATVELVFQHLSDLAESLILAARDWLFQRCCAEYGTPKNTLGETQELLILGMGKLGGR
                     ELNFSSDIDLIFTYPDIGETEGGRKSIENSKFFTRMGQRLIKVLDEITADGFVYRTDM
                     RLRPFGDSGALVLSFTAMEDYYQEQGRDWERYAMIKAKILGEDSQNLNHRYLKQMLRP
                     FVYRRYLDFSAIQSLREMKEKISREVVRRNLTDNIKFGAGGIREVEFIAQTFQMIRGG
                     RDKILQERSLLKVLPRLAELNLLTQTQVETLHNAYIFYRQIENVLQAIDDKQTQTLPT
                     DEASQARLVFACQSYYQQDLYSEKTHWVEHSFNDWQQFMAVLSQYQQAVRQIFNEIIG
                     EEETQANCNPVNEKLAEWKDILHYNIRLEDLSAVLKGYPKVAENDYTEIFRHFSTTFQ
                     DWVKRPIGVRGREVLRNLMPRIADSIFKGEDHLLLLPRVLNIVDKITTRTTYLELMLE
                     KEQILPQLLALCSKSVMIAEQIARYPMLLDELMSHRGLTDVQAFEKYQSALQDYLIRI
                     PEEDEEALIDGLRQFKQTQILRIAAADILGVLLVMKISDHLTYLAEAIINAVVNMAWK
                     QVSQRFGVPEHLEADEKGFAVIGYGKLGGIELGYNSDLDLVFLHNAPEDSQTVGGKKE
                     ISSHQFYLKLAQKINSIFNLNTSAGVLYEVDMRLRPSGEAGLLVSTFNAYEHYQKNEA
                     WTWESQALVRTRCVFGAENLKQAFEKIRQSTLAQPRASGQLRQEICEMRQKMYQHLSS
                     HSAEQFHIKQDQGGITDIEFIAQYLVLAHSHQHPKMAVWSDNVRIFDSAVECGILSSE
                     QSEQLQHCYTALRNKIHHLNLLRKDSVVDASEFTTERAFVREMWQRLLA"
     gene            complement(27859..31017)
                     /locus_tag="PXF40_000867"
     CDS             complement(27859..31017)
                     /locus_tag="PXF40_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HDL5802234.1"
                     /translation="MITINENTIEQSAIATLQSLGWDYTYGKKILAGLEHEWRERTAE
                     VILKPLLAQAIAKFNPNLPACEVENVVAQVCRADSGDLAERNRQAYDWLRNGVKITYQ
                     LYGEQVSDVVQLIDFQRPENNDFRIVNQLDISGKKGKRIPDLIGFVNGLPLVVFELKN
                     PLKENADIGKAFAQLQTYKDEISDLFVFNQALVISDGIVARIGSLTADFDRFTPWRVV
                     DEKNQSKRIVFEDELTALLQGVMTPKNLLDYVQNFVVFERDGKNRLIKKIGAYHQFYG
                     VNEAVDCTLLAATGNRKIGVFWHTQGSGKSLSMLFYAGKVLSQSSLKNPTLVLVTDRN
                     DLDGQLYATFCGGEALLKQTPIQADGRDELRSALASRSAGGVIFTTIQKFGLMEGELA
                     HPVLNERENIIVITDEAHRSQYGFSQKINHKGEYREGYAKHLRSALPNASFIGFTGTP
                     IELDDKDTQEVFGKYVSIYDFEDAVEDGATVPIIYEPRQISLGESGEFSKVMEEAQQL
                     IDDDENSYNFRLREKLHSVDSRLQKMAEDIIAHYDERTKQQDGKAMVVVMSRAICVKL
                     YEKITALRPEWHSNDVLQGSIKIVMTSNASDPAEWQKHNQDKKTLEKRFKDPDDPLNI
                     VIVRDMWLTGFDAPCCNTMYIDKPMSGHNLMQAIARVNRVFRNKSRENGGLIVDYVGL
                     TDELEKAMKQYTNAGGKEKPVRDISAVLEKMVEHITVIHGQFATPIDGQAVDIAKMLQ
                     ISEPPKLLNAILTSANHILALDRIQPPDNTAKDKTPRKNAFLQSVRLAKKGYALCGAL
                     KAVEPYKQELAFYDAVRATIIKNSTAPRNSSSENDRLLQLTALMNRAVQSDGVVDLFD
                     LLKKDRPNINLLSDEFLETVKNSPTKDLWLSAMERYLASQLREQSGANLATKKAFEQK
                     LKEAMNQYHNHNLSVLEILEELIALAKEFEARQKRGEALGLSPAEMAFYDALARNESA
                     VREMGDEVLMKLAKDITDKLRKSVTVDWQYKDSVRAKMRTLIRIALRTYKYPPDLQAE
                     AIEFVLQQAEEIAGEFAITETA"
     gene            complement(31017..>31359)
                     /locus_tag="PXF40_000868"
     CDS             complement(31017..>31359)
                     /locus_tag="PXF40_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5802235.1"
                     /translation="RVSITTKETTTNEAIAHFKIPSSSNLSSEFLYCYLKNFDFNNLG
                     STSSIATAVNSKMIKEMEILEPSVLVINHFNEYIEGIFNKIKENIIQNNNLSKIRDKL
                     LPKLLSGEMEL"
BASE COUNT         8355 a         7380 c         6079 g         9545 t
ORIGIN      
        1 ccgcaccaag ccctgccgca atcattgcat ttgattcggt tgctccctta taccagccta
       61 caataattcg ctcactgtta aggcttgcgg ttaaggttgt gccggtggca taagtgccac
      121 gccagcccat tacaccaata gccggtttat cttcaatcgg ggcagaaacc gattctaaat
      181 ggctacgcaa ggcaagggca ttttcatcat ctgaaaacgg cgaaataatc acgttataat
      241 gcgtaccggc aacactcgcc aacgccggag caattagggc attacgctga ccgttatcaa
      301 acgcacgagc ctcaagggtt aaacctgttg ctgtattgcg tgttgcaagc gtgatttcat
      361 tgctgatttc gccttttgct tttgaggtca gtttaagtgt cgtttcactt tccacacttg
      421 ccaccacagg gctataactc gccgcattaa tcacattaac taaacgagcc acaatcgcct
      481 gtgcttcttc gccttttgcg gctgcaactt cgtaagctgt gccggcaatc gtaatacgca
      541 ccacaccggc ataagttact gtgccggtaa aactaacttg ccctgttgct gcaatacctg
      601 cctcgtggtc ttttaagccc accaccgtta aacggattag cggattattt tggattgctt
      661 ggcgaaccat taaatgagct accgagcctt taccaaataa attttccgcc tccacatcgc
      721 taaaaatctt ttgcggagca gtaaaagcag cctcaccgtt tagcattggt gcaacaatta
      781 gcacctcttg ctcattggtc ggcaaggtgg ttactgcatc tttgttgttg tattcggtca
      841 gcacacttgg tttgcgaata ctgttcggga ttttctcaaa ttcaattttt gacattattt
      901 gccccctgtt tctttagcgg atttggtttc tttgacgaca atcaaatcgc catccgcaat
      961 gcggcgttga tagtaaaggg tgttttcaac ctctactgcc tcttgttcaa tatagtgatg
     1021 cggtcggttt tctaccggca cacgcacccc tttagcggct ttcactttta acatctaatc
     1081 accatcctta aattctgttc taaatgccgt ttcggcattg ttattcgggt caaaaatccg
     1141 attattaaag cccgataaat cgccttgcgg ttcatctagc ttgccttgat actgcttaaa
     1201 gacttgctca ttcggctcaa ccccttcggg gaatctacca tcatcaagca cattgcactc
     1261 gttgtagctg atttcaaact caatagcata agcagagagt ttctctttct tcacttccgc
     1321 attattccaa atcgtgcgga ttcgcttagg ctggataggg tggactaaac cgtctaaagt
     1381 ctggttaatc aataaggttt tcaccgctcc cagcaactga ttaaccccca cctcacgact
     1441 tgttacccca cctaaacgcc cagcagtctg atttcgcatt gagcgagtaa taaccaacac
     1501 cacaaacaca tcagtggctt gatagcgttt acctcttact cccattgatt tcgcctcgaa
     1561 cgccgagcca ccataagaga caagacaagc aggcaaacgg agaacatcta acttctcatc
     1621 gttaatttcc ccggcatacc cagcaacggc atacaccatt ttgcctaagc ccagcgttaa
     1681 acgctcaatc aaagcacgct caattttgct aatcatcgct tatcacgccc ccaaatacgg
     1741 ttgcccccgt taaaaaactg cactgtattt tcgccagtag ccgattcttc ctcattggtt
     1801 tcatcaaccg ctaacgacac tacgccctta gagatgtttt ccagctcttt taagcaaagt
     1861 ttgtagcggt tttccacctc ttcggtcatc gttactaatg atttgctggt taaatgataa
     1921 cgagccaaat cacagcaaat acgctttaaa ttttgcggta cagtctttaa tggcagacgg
     1981 taacgcccac ttaaatagcc atcaatttgg ctggaagagt ccgctaaagc tacttcaaga
     2041 gtcgcttcat caaccacgcc taccatttca cggtcggtta gctcaatgga ttcctgttcg
     2101 ccaattcgca aaacgaaatc atcaaccaac gcatacatta cgcatcgccc tcaacaacag
     2161 gtacaaactc caaataaggg tcgttggcta aggtaataat ttgttcatca ctcaaggctt
     2221 tacgagcaat ttctaccgcc gtttctttat taaaacggta gccacaacgc ccataggtgg
     2281 cttgtgggtg gatagatttg agcttaactt caaaagcaat aggatttatc aaagcaccgt
     2341 catcaggctt agtttcactt tcaggcggtt taggttgttc atccgtttta tcttcaggct
     2401 gttcattcac cttatcttca agcggtgtgt tttcgtttgt gttcaaagct tcattgtcat
     2461 ttttctttgg ttttgccatt ttgctaccct ctcaaaatgg gcgtattgct acgcccaaca
     2521 ttaaacttat tcagcaataa atggattcac taccactttt aacacacctt ttaaggtgtt
     2581 ggttgtgccg tcaattaatt ctgcttcgag taatttgcgt gcagcaaact caagcgaagg
     2641 tggcacaagc aaagtggtcg ggcgaatatt taactgctta tcgccatcgc cttttaaggt
     2701 gcgcattgca gttaatactt tttcaagggt ttcactattt aactcactat cttcaacacg
     2761 gtgaattaac tgccagaaac caaaaccggc attaccacga gcacgcacac cccataaata
     2821 ttggtctttc ataaagacgt ggtctgactc acttggatca aacttcgttt caatttcagg
     2881 tgtagtacgt tcttgccaaa ttaacggctt aatggcttgg ctatcatcta gcacatagaa
     2941 cgcaggctta ccgctggcag agcctgtggt gatattactt tgtgttttac ttgtgccagt
     3001 tccatcaaca ttctgataaa cagggtgatc ggtatcaaag aagttctgcc cgtcatagca
     3061 aagggttgtc ttaccttttt tcaacaaact aaataccaaa tcatcaggta attcagccgc
     3121 actttgtgcc gcttgtttca ccattggggt aaataagccc acttggtcat cttcaatggc
     3181 agtacgaggc acagcaacgg ttgattcaaa taatttattc tcaatcgtca ttccttgtgc
     3241 ttgcatattt ttaatttgac ggtcgcccac ccactcttgc attttcggga attgtcccag
     3301 ccaagcatag gtattagtag cggtgctgga gcttaccttc attgcaaccg ttccccattg
     3361 tggttcaagc acttttaaac cagcactaaa ttctttacga aatgcagtat caagtgcttt
     3421 taataattca gattttttaa acattacttg gattcctctg ttttatattt ttcaatgtaa
     3481 gctgcttcgc ttaaaccaag cgattttgct gctgcaattt ccgcagcaga taacgccact
     3541 ttctccgtac ctttgttcgg gtcttcaccc cccgactgcg tacttgctaa agcggggtta
     3601 ggtgttaccg ttttcaaaaa gtcggataaa gccactaaat cttgcttacc gagcttttcc
     3661 gcccacgctt tttgagccgg caataaccga ccgtcagaaa gagcggtttg aattaacgca
     3721 tcacgctctt tatcgttgat ttgctgtttt aagccgttca gctcggtttg cactgcttgc
     3781 aagtcgctta acgccacaaa cttcgccggg tcagggtgat tcactttggc agagagtgca
     3841 accacttggc ttttctcttt tgccagctcg gtataaacat cacttaacgc caccgggctg
     3901 tcgcctttgg ctttctcaag tgcggtcagt ttttcggtaa tctgctcatc ggtcgcattt
     3961 gccgacaatg caaataattt aattaagagt tctttcattt ttggattttc ctcttcgggg
     4021 gttaaaaatt tggcaaattg gctagacatc gcaaccacct cttgcagatt atgcaaggca
     4081 gggcggttag ttaaggcggc attaagtacc ttaattacca ttccgctgcc gtctgtcaaa
     4141 aacagtggcg agagatagcg ataaacgccg tctttaatct cttgggtcgc ttgtggtgtc
     4201 cacttaacat ccgcaaacaa gccttcgccc gagatatatt ccgccttggt aatccaaccc
     4261 gcagcagggt tgcctttgcc gttctcggcg atgtacaggg tctgatgctc ataatcaatc
     4321 atcagatcaa tcgcagtgtt gttaatatca tcggctaacg catagccatt ctcgtcacct
     4381 acataccaac gtcctccacg cccgtcttga gcctcaaacc aaccaaaagg gaaaagttga
     4441 atacgtccat ttgcctcttg gttgagttta aaactcaatg caatggggtt tagtttgaat
     4501 ttatgcttaa acacaaaaac acctcaaaac aaattaatga ggctaaagaa tagaagattg
     4561 agaaaaaaga gtaacgggga gcaacttcca caagttgcaa attttcagaa aaaaacaacc
     4621 gcttgtattc agcgaggaat gtaacccatt ttaaaacgct ttaaatccgt tttaaaaaat
     4681 tttaaaaaag ttggaatgat aaatcaccat aaaaaaaaca aaaacgccac agagagcgat
     4741 ttaggggcta tctgtggcga ttatcttatc gcttaatcca gcagtttttg ccagtaggct
     4801 tgcacatcgt ccaaaatatc ttgcctgtct tgcgaggtta attgtaaaaa aggtcgggct
     4861 tcaattttta ctttacgccc acgcccagcc ataccaccga attgatgaat agcagcataa
     4921 ggctcatttg tgccaacaat cgccgaatca ttattataat cagcagtaat gctgcccatt
     4981 aaattttccg tatcaactaa cggcgtgcct tgccgatgtt ttatacccag ccatttcggg
     5041 cgaccgccct catcaaaatt ggtcagtacc gccgattcca ttttgccggc aatattccgc
     5101 atcaagtctg ttttatttgc cgttttagca gcaatacggt taagcgtggc aataatttca
     5161 tcaatgccgt ggatttggat ttcaatcatt tttaaccttg caagttgatt tttaaaataa
     5221 acaggggtat attcctttta cggttattag aaaagcggtg ataatctccc tgccgcagcc
     5281 tatttgagat ggcaagtcct gctcaaatga ccgagagcgt gtgtaagtga ccgggagcct
     5341 tacctaataa ccgtattttt caacagcagc ttatccaatt ctttttgtcc aatctccctt
     5401 gttgatacca gaaataattc accaaactct tctaagtatt tcaccacaac aagaatacga
     5461 taatgctcaa agtttcgtat aaagctgaaa tttttgcctt cttgcaaaat atgattaggc
     5521 tgaaaaatta catcaggaat atttgcatac acatcaaacc caaaatcctg cccctcacgg
     5581 ctataaaact gcttaatcag tgtgtcatcc gaaagccata ccgtgccgac tttactgtcg
     5641 attaagcgtt gtgtttcctc acttaaccga ccagcagcaa atttaaagtt ttgattaagg
     5701 gcatttcgca ctttaaccat ctcatcaggc gagagttttt tcgccccatc tttggcaagt
     5761 gccacagcct cttctaactt gttaaacgcc tgcttaaatt caccaccgct catttctgct
     5821 ttggtaaatt ggtaagccag cttttcaggg tataaatcca aattcggctt ataggttaaa
     5881 cgccccacat tataatcaaa acctttatca gccaatcgca ccgtaccatc agccaattta
     5941 aagccaatgg tttcctcttg gttgcctaac ttatctttcg gtcgttttgc cttcactaaa
     6001 aacggctcgc tactgccgac ttcgtcaatc cctttacgct ttaaatcccg ctcacttaac
     6061 gcaatcacgg tacaacggca attaaagccg ttcggcggat aaaaagtcgc ccaaaacgga
     6121 tcgtcataac gataaatctt accctgtaat gcttggtgag cagggcgggt gcgttggtcg
     6181 cctaccgccg aatattgcca ataagggcga ttatccacat tatccatata ccgctgataa
     6241 cgagccgcag aataagcctg ttgcatattg gtacgataaa tcgtattcaa gcggcgaggc
     6301 gtgccgaaat gctcgccggt tttcgggtcg gcaagcagtt tgccatcaat gccacgacta
     6361 atcgtcgtgt ccatacaccc agcctttccg ttcaaattct gccgtaagcg ttttcttcca
     6421 ttcattaaag gatttcccct cacgccgtgc tttttccatc gactcataaa tatcacgggt
     6481 catttcaagg ctagtgagct tgctaatggt ggcggctcgc cccaatgcag aatcaaataa
     6541 ttcctgctta aacactttat tcgcaagcaa cttcttctgc cgtaaaaact caatcgcctg
     6601 cttaggctct agtccaatgg caaaattaac tttctgcatt cgcagcccct aataaatccg
     6661 ccaaaaataa cgcattcgct aaatagcggt cgtgttcttc actcactaaa tcagggtagg
     6721 ctgccgccaa tttttctgct gcctcatcat aagagctaca cgccattacc accgccaccg
     6781 cctttttcgt gatggggtca aattgggcgt taaaatccgg cacggaaaaa gcctcgtctg
     6841 ccaaatcatc taaggcatct tgctctttaa tgcccgtttt ggtttgggcc gacaaagcgt
     6901 gaaccttgcc cccacaaccg cattcgcaag cggtcatttt ttgcggaaaa tttgcggata
     6961 accccaccgc ttgtggcggg gcagaacgcc ctaacaccgc ttcattttct tgagcttcgg
     7021 gaataccgag tttatccatc gcccactgca ccggaatcgg cattccaata tccaccaatt
     7081 tcggcaagct ctcggcaaat aacgccaagt cggcaggctc tttggtatca aactcaaaac
     7141 tcggaatgcg ggttgggtcg atattgccaa aattaatttg cagaaacggc agaataattt
     7201 gttgggtaaa cgtctgcccc agctgtttca cgtccgacac caacaaatca cgccgcactt
     7261 cgttatgcac attgccgagt gcattggtag agcttttgcc gtctgcaccg ctggttaagg
     7321 tttgccccaa aatcaagcgg gcgatagact tctcacacca atccaccatt tgcaaaaacg
     7381 gattattgcc ggctgcaccg cctgcattag cggcgttatg caactcaata ctcatcgact
     7441 ccggcataat tccggcagcg ttgtgtccga tttccgctaa tgcacgttta agcgtttgtt
     7501 tttcgtttgg tgttgcccct gcaccgtatt taccaatgcg gataggcata ccatacagct
     7561 ccaaaaactc ggcaaagtcg tggatagagt agtgtttaaa catatacagc caagccagcg
     7621 agcggaataa attattgcgt gccgcctgtg tggagcggga tttatgcgta tgcaccaccc
     7681 agccaaattc tcgtaatggc tcaccttcgg tattttgtcg ggttttcagc aacagattgt
     7741 cgtgcttatc ccacttaaac cacgattgag gacggtggat aaaggcgttc ggataccaca
     7801 atttaccgtt aaacgcccat tcaatttcga gggcagcaaa accgtgtccc acagcgtcca
     7861 tacagtccat caccaaatct tcaaggttgc cgagctgata aaataactca tcaacctcat
     7921 cacgcagttt ttcttcctgc ggtgtggcat tgcgaggggc aacaatcgcc caatctacgc
     7981 ctaatgcggc acgcttacgg gtttggatat tggcaaaaat agagctgtcc cgctcctcaa
     8041 tatccataaa taattcgtgt tgagcggtaa tatcgccatt ctccgtatct tcaaaaatcg
     8101 ctttcatttt agcaggcgta ataaaattgc tcggatggtc ggagagtacc cgacctgtag
     8161 cggtaatttc ggctaaatcc gtctgcaatt cttgattttt aatcgggttt aaattcggtt
     8221 taatctgctt gttatgcttc tttttgctca taaattttcc ttttcagagc ttagttacgc
     8281 tcaatatagt ccccctcttt agcaaagagg ggagttacat taatgccgcc acttactgcg
     8341 atactcaccg tcaaaatcat ctacactctc ccactcaatc ggggcagagc tgctgagtgc
     8401 atttcgccat aacatttcca acgcatccgg accatcatcg tgatcggctt tcggaaaatg
     8461 gcgaagctgg ctttcaagcg tagattgcga gcggtgcaac aaaatcaaac cgttggcaat
     8521 atgcggttgc aagctctcaa tccgtaacat cttgtcactg ttcggcttgg ttgccgttgc
     8581 cggcaccggc ttaccacgct gggcagaacg cttgaccagt tccgtctgca aaaactcctg
     8641 aaattgcacc gtctccacaa accagcggtg acagttatat tgcgaatgca gtctaatcac
     8701 gtcctcaata attaaatccg gcaatcgttt tttgatttgt gcctcaacaa catagagctt
     8761 gccactctca cgatgatagc caccgaccaa aattgcagat gggtcacggc ttgccccagc
     8821 tttccccatt gaggggtcta acgccccgaa ataaatcagg tcatcaggca gttccgtcca
     8881 atactggata ctgttggcaa aaatcgcatc atcacccgag acagggtcat tttgatactc
     8941 ggagtcaaat gctgagtgcc catcactagc acggattttc atcaagtaga ggatagggcg
     9001 agctaaccaa gagactaacg ctcctttatc catttctgct ttatgctgtt gataaaagag
     9061 atcagacata gtgtcatcgt ccccttcttc cgagaggtat atattttccc attcgtccca
     9121 taacgccata ttgccgggaa agcgtaaaat ggctttaaaa cgaactcgcc gccaaccttt
     9181 tgtatttaaa atacggctaa gcacactgtc ataatgtaga attgtgccga catagataac
     9241 atcaaacttt tcacctgcag caccaagttt taaaactgct tttaaaaccc agttatgcaa
     9301 tttattacgc tgtgcaggtg tttctacgct ttcatcattc tcaatatcat caagtactac
     9361 taaatccgga cgataagctc cgtggcgacg accacgcaat ttttgcccag cccccacagc
     9421 ttcaactttt tgttttttag ccgtcataat gacacctgca cgccaaacct tgccttgtgc
     9481 aacctcgggg aaatcaattc ttaaacgagg gttagattca atttccactt taatagcttc
     9541 aagcatactg tatgcctgtt ctttggtgtc catcgcaata atgatgtatc tttttaaatc
     9601 acggactaaa caccacagcg ggaataattg cgtacaaatc gttgattttg cctcgccacg
     9661 aggggctgca atcgcttggc ggactgactt agaaagatca cttaccgaaa gcggtaaatt
     9721 ctcaaagaga taatgatgca actgtgattt atgttcagac cgcacatagt gtggaaaata
     9781 agcctgcaca aaatactcaa agccgtgaac agggtctaaa accttttgac ggcgttcgct
     9841 aatggcttgt ggtttatcgt cccaaccctc aaaactcgct tcgatatttt gttgtaactg
     9901 tcgccgtaat tcttccagtt ctttttcaaa ttctttgatt ttcataaatt acatacaagc
     9961 tgcgataagc aacaaccagc cccaaccgtc tgtaccgttg agcattagtt ttattgctcc
    10021 gaaaatacaa gcaagttgga caatccaacg gaaagagtaa tgcttatgca ctacagtttg
    10081 ttttttctta gccattactt aaactccttt ttgaattgca cttctagctc atctaacatt
    10141 tctaaaaagt caggcaataa atgcggtttc ttggttttga cgatattcgc catcatctca
    10201 atcgcacgca tagcggttgc cattgcactt gtttcaggca atagtttctt gctcgatgcc
    10261 gtcatcttcg caaacgaatc agccagagca gctaatgcct caaccttagc tgcggttggc
    10321 atttcggtgt tttcctcaag ctccgtcatc aacgtgcggt acttaattaa aaaaccggct
    10381 aacaagcctt gagcgatatt ctcaatacca ccgcttgcca tcgcttgcac atcacgagct
    10441 ttttcccagt tatcaccgtt cttttcagca gccgctttcc aacgccgtgc cgtgccgaat
    10501 gatacccctg cacgttctgc tgccatttcg aggcttaaac ggtcaaacac ataggcttgc
    10561 cgaaccgctt tttgtacttc aacatcgtgt gccatacgcc ctctacattc caaatttcag
    10621 gcgtaacaac tcaaaaccca cagcaacaat gccaccaccc aagccaccgg caactacagc
    10681 atcacggcgg tttttacgtg ccatttcatt cactaaacga ttagtcgctt ggatttcacg
    10741 gtgtaagcgt tcgatttctt cgttttgttt atccacctta tcgtttagct catttaatcc
    10801 acctaaaatc aggtctaatt tttccgaatc ggtttgcttt tgttttttac ggctcattac
    10861 ttatccgcct ttttatcaag tttttggttt acttctttga gcgagtctaa aatatcgtcc
    10921 agcttttcct taatccctct attcacttcg tgggcaagct ctttggattg atatttgctc
    10981 tccatttctg cttttagctc ttttaccgtt tgctcattgc ggttgatacg atcaaatatg
    11041 accttgccta caaacgccac taacggagca actacaaaag agatcagcat ctgaaacagt
    11101 ttttcatcaa tcataacgcc cccttttggc tcgcccgacc gggtgttgat taccttgtgc
    11161 caccgccgca cgcaccacgt tatgcaattc tgcaaggtca ggacggcggc gataaaaacg
    11221 ccattgttgc caacgctgtc tgagtttttt aattaacttc attctggcaa acttcctcat
    11281 aggtcagatt gtgtgcaagc acttggcgtt tcgtttccat tgtgtccgca cggctcgggt
    11341 aaatcagacc gaacgccgtg caacccgttg tcgtcacgga agtaaccgtg ttggtgcaac
    11401 tgctcatcaa tggcactagg ctgaatacgg cgagtttcac taacgtgttt ttgctgaatt
    11461 ttggcatttt taacctctgc atttttttgt tgaatttcga ccgcttgttg ctgcttttcc
    11521 gcctttaatg tagcggtaag tttccgctcc tgctttaatt gccagctttt ataaaaggca
    11581 taggctaaaa ttgtgcttac tacaccaacc acacctgcaa tttgttgagt aatcattctt
    11641 cagcctccct tgagcgttct ttttgtttta acgcacttac cacccctttt gtggctgggc
    11701 tacccaatac acaaatacca gcataagcaa accaccagtc ggaaataaac ggcttatcgt
    11761 aaaggtaggc gtgaattaaa atgcccgata acactaacca gctcataaac tgaataaagc
    11821 cagtggtgct ggctgtgccg tctttattgg taattaaatc aagtaaaaat tgcttcacga
    11881 ttattcctcc accgtgtctt tggcaaaata acgcaaatta cccgccattc ggttaatcca
    11941 acctctacca aaacggtcaa agtgtttgag tttggtgtaa aactcaaggc gttctgcctg
    12001 aaataacaag cccacatccg caaccgaata acgctcaatc gcagccaaag tcactttacc
    12061 gataatgccg tcatcagcca cacctaccgc tcgctgtaac attcggctag cattgcccga
    12121 accgtggttt acacacgcat ctaaaaactg aaaagccaac tcaggcggga actgctcaca
    12181 gttataacgt tgccaaaagg ctttgaggta aatagttttc gcatccgcac ggctcattgc
    12241 acgcatagag ccggtatagc cattcgcacg ggcagtatgg atagtgatac cccaattcgt
    12301 ttcgccaccg gggtctttcg ggtcgttcac ataaccgccc tcgtgtccga taagacggtc
    12361 aaatgcaaga ttaaagtcag caatagttgc cttgtttttg ataggttcag tcataaaaaa
    12421 agcctcttta aattcaatga tgatttaaag agactttaat gatttagagc aacggggagc
    12481 aggcgaaagg attccacact taaaacaagg tagcttgcga aacggtatgc ttacgctgat
    12541 aatatcgtac tgcctcccac gcaacacgat cacacacgct gtatttaggg caaatttgca
    12601 taatcgcaag cctgccactt agccctcctt gctcggttaa ttgacaataa tcggcataaa
    12661 tctgctgatt acgcaacatt cttaatgcgg tttcacaacg tggcaaatag acctcgcaag
    12721 ctcccatata agcctgtaat ttcactgcat catcttgccc taatacctct ttgagcttat
    12781 taaaatagag ttttccgtta gaaaattgga atgaaaagcc accaaaggct ttgattagct
    12841 tttcagttgc cggcaaacca atcacgccca caatttcttt caccgtttcc ggcaaataat
    12901 gttcgacact ttcaaattca gacataaaaa atccccttga ataatttcca cgaaagccat
    12961 tatccaaggg ggttattcaa atctgtaata cttacttaaa aatttttttg caaatttttt
    13021 aaaagctcag cccattttgt gtacggcata tctgatctag ctgcggttga tgacagttct
    13081 gtctcccacc gcattactat tctttgcccg acccctaata tgttagctac ctctgtttgt
    13141 gtgaggttat ggtgctttct tagcattttt aagttgcttg gtgtgtatcc aaactctggg
    13201 ttttcaatca ttcacctccc tccattaaac tagctattaa atacagcaac aacgataggg
    13261 tttctaataa tgctctcgcc tttatcttct ccgcctcttg cactatcgcc tttaactagg
    13321 ataaagtttt gcccacagta tgactggaaa cctttaaatt caacatcaaa ttttttgcaa
    13381 gcatcacgac ctagattttt aatagcattt aacaaacctg cttcatctgc attttggatt
    13441 cccattgtac aaatgccgtc taattcttca tctgtttttt caccatcgac ccaaacaaaa
    13501 gaatttccta attcatcgcc aacttgatgc acatctgtag ttgctcttaa accataaaca
    13561 gcgaagcagt cttcatcggc atcgtttagt aaagcattta aaagtttttg gtaatctgtc
    13621 attttaattt ctcctgtttg gctatgggtg cattatagta atataattac ctattgcaag
    13681 tgatttttcg tttttttctt aaattttttt atgtaaataa aaaagaccgc ttgaaagcgg
    13741 tctaaattta ttttttcttg gttgcagaaa tggattttgc aatggtaaag gcagtttccc
    13801 aagcctgttg attatctgta acctcaattt tacggcaagc aatcgcctcg ttgttaaagt
    13861 cagtcatatc aaccttgtcc gaattaacaa gcaaaataac acggcgtaaa gcacaagcag
    13921 caataggatt gtgatcgtgc ccaaacgaac cagtttccat tccgtaagct acatttctta
    13981 actgttgata atcaccactt acaagagcat ttgctgtttc ttgttcagct ttttctgtca
    14041 ttgctattgc tggtaacgac aataagcata aggttgttaa tagcagttct ttcattttaa
    14101 atacctttaa aagttgatta aaaaacacct aaaatctacc acaaaaaagc ccactattta
    14161 aagtgggcta tgcaataaat ttattattta acactcattc cgtgcctatg gttataactc
    14221 gccaatatct gcactaattt atgcaactga tcatctgtca gccattgcac ccgctcaata
    14281 ccaaacgagc gtttggcaat ggcgtgggcg taatcccacg gcttttggct ttgatacagc
    14341 aacgccccga ttttatttat caacccttgc cggtgagggg cggttttact tgctgttggg
    14401 cgtttaccgt attttttcga cttcaccaca aaccctttag ctttcattgt ttgcagtacg
    14461 gtcattaatt cgctatcggt catcattgag cagcttggtt tatccaccgc ctctaacaac
    14521 agcattttat aggcgttatc atccagtttt agctcatttt tgccgatatg gattttctgt
    14581 atcatctgct ttctagtttg cggttgcatt ttgcttttcc tcctgccatt tcagccaaat
    14641 ttgataactt tcggtgttct taacggcttc cagttgcccc atttgcttca ttcgttccac
    14701 atacatcacg gcatcgtgtt tcttttggtc tgcttgccgt tgctgttgct caaggctact
    14761 cactgctttc gcttcacttc ttactactgc aaattgtggc ttcacgcttt catatacttt
    14821 cttcaagtaa ttatgatttg ccagcggctc acatctgcca gtttcacgcc gattccgtct
    14881 tacttgttcc accgtatcca ttaaggcttt ttctaacaca ttagagggag ggtaaagctc
    14941 caataaactc tgcacaattt tcaaggctcg gctattggca aggctgtttt tctgtggctt
    15001 aaataaccct aaatacgcca ccaccgcacg cccacaattc ccaccgatat tgactatcgt
    15061 atttaacaac tcacgccctg catcatcttc aatcaacgcc tcaaacgaga tgtcggaatg
    15121 gcaaatcggg catttgcata gtttcatcat tctgttcctt cttctattgt ttcgagatca
    15181 acccaataag ttcgactatc agggtatggg ttatgccaag ttgctggagt tagctcgcaa
    15241 ataactaatt gttgtaacac aatctctccc gatttctttt tacataaccg atattcagga
    15301 attttttgat attccatttt atgctcctat aaaacacatt attcagccca cttaaatagg
    15361 ggttaaatgg gctgtaaatg ggttttatta cttcccctgt attgctaaaa actcactttc
    15421 tttaatctca accaatccct ctgcaatctc aggaaatggt tcatcatttt tatcaatagg
    15481 cattggcatt tcaaccagta aggtgttttc acaaatgcct gctacggcta aataacttct
    15541 acctgatgtt ggggaataac taaaatcact tacaaaataa agcatattca aacgttttaa
    15601 gatatagggc gaaaaatcac gatgtttctc ataaatttca ttaattgctt taaaatcttc
    15661 tgcaagttct ttcccttttt cgtaacgttt atcaggtttg acgaggtaaa actcatcatt
    15721 aaatttaccg accttgaacc ctttaacatc taaaacttgg ctaatattgg ttgctttaca
    15781 agcaatccct ataactattc tatgaaacca gcctgaccta ctaattaatc catcattgaa
    15841 aggatatttt tctaaaatag cattgagctt atccttgcgt tcttctttag atacttgata
    15901 atctgcataa atgcttttta gtggctcttg ggttatatcc cctttaaaaa atctaaattt
    15961 cattcttaac tccttactgg ggtggttaat gtttccgatt tgccgttaat aacttcaaat
    16021 gcacctttgg caacaaatcc tgcaccgtgc cgagataaac accactgcga ataaagtcac
    16081 tctgttttaa atatttttgt gcctgaataa tctgcattaa cgcctcgttt aattggctgt
    16141 taagttcgtt tttctcttgt tcggtcatca tctcctccta aaacggtttc ttatgcatac
    16201 gtttacaaaa taccgctcgt tgccccgccc agtctcagtt agcggtcttt tttgctgata
    16261 attttgcaac tttccaatgg tcttgggctt ctgcataatt gcctttacgt tcggcttccg
    16321 ctgctttctc ggcataatgt ttgtagcggt caaactcggt cgccttttgt tctgttttca
    16381 ttttttcctc ctgtggttaa aacactttat aaatgccctt ctatcttgtc cccctctttg
    16441 aaaaagaggg gctaggggag atttttaaag ggcattgaaa aggtttttta actaagactt
    16501 tctttttaac tgatttaaaa tatgcaaatg atttaataac gatgcatatt ctttatcatc
    16561 aaagtccatc attattaatt ttttgttatc acaaaagtgt actgttacat tcccgttaat
    16621 attttctatt gaacaaacct tgtctgtatt aaccacaaca ggtttatccg tataattaac
    16681 attaaaagta ataaacattc taaacccccg ccatatctaa actaatcggc tgatactttc
    16741 cgttttcatc acgtttataa aaacggatat aacctttact accgatcact tgtacgctat
    16801 ctgaaatcgc tgtcattgct tgattccatc ttgcatcatc aatctcaaca cggcggagag
    16861 agagaatttt tgctgtagat aaattacctt ccttatccac ctcaaacgca ttatcaatta
    16921 aggccttaag ctccggtttt gccccttccg accaatcgtg caagcattca tcaatcaagg
    16981 cttttgctgc gtgaatacgc tcatcaaagc gaatattctc ttgcactgct aactgcaact
    17041 tatattcacc gtcataagta aatagtgtga tattgccttt tgcaccgcca atttttactc
    17101 catatttgtc agccgatagg ctgacaaaag cccccacgtc atcaaatacg gattgtttaa
    17161 aatcacctaa cgctttgctt aacgcttgtg ctttgcttac aaattggcga actaattcat
    17221 cacgttcttt gtcgatttct tttactaatg cctccggctt taaattgcca tcagcatctt
    17281 tccagtaaat ttcattaccg attgttactt tactcataat acttcctctc tattccaacc
    17341 cgactttcac ggtgcggatt gctttaccgt tatatttcac tcttttgttg tgagcagggg
    17401 acgacataaa ccgcactgtt ttcgcctcca cccccaaccg ttctgctaac tcttccgccg
    17461 taccgtcagc cacattctct tcgccaacat acagggcata aatcattcgc cgttttttca
    17521 tttctacacc ttcgtaacac gttcagactc ccacacgcat ttcacccccc gcacctgcat
    17581 ttgatagctg tcataccgtc tgccgccttt ggttttcatt ccaaacaggc ttgccaagcc
    17641 gttcttgact aaatcctgtg ttttgcagtt atcccgtaag accaagcggg gtgggctttt
    17701 cgcttcaaac tccactcgtt caacttccaa ctccatcgcc tcacattcca aagtggcaat
    17761 ttctaacttc acaaggctgt cgtggataaa cgcatttaag gggttcatca tttcgcctgc
    17821 tttttcgctg taaacctttt gcataacttg ctccttagct aatcaacatc ttgctatatt
    17881 gctcaaccaa atctttacta attggtgttt ggttaatctc gctagaccgc accacgccac
    17941 gcattaactt acttaatcgg cgggcattgc cgtgacaagc tttaattagc ggggcattaa
    18001 attcatttgt acctaacgca ctttcggcta atagccccaa atcttcctcg ctcaaggcat
    18061 ttcccaaatc acaagcaaaa cctactcggc tataaagctg tgccagctca ttatttttac
    18121 ctttaagatt aaccaacaat ctcggcatac cggctaacac cacgcccacg ctggttaaat
    18181 cgtggattcg gcggataaac tccagcgagc gggtcgaaag taattcagct tcatcaatca
    18241 ttagcaacct ttcagagcct tttaacttgt tcacaatgct ttctaatagt tcgttattta
    18301 cccctctggc atttgccccc accgcctcgg caatcttgcg gagcaagact ttaggtgtgc
    18361 aactcggatc aacctcaatt aatgttgcag agctgtttct gcgttcgtat tctttgagca
    18421 tttgggtttt acctaagccg gctgccccaa aaatcacatt aatttcgcct tcaatatggg
    18481 caaactgcat tacctccatt cctctgcgtg ccgccaaagt tggcacaaaa gcagcgttat
    18541 atttcgcttc caccactttt gccttatcac gctcaatcag ctcgtctact ttgcgatcca
    18601 tttcagccac attgccgtta taatcgcctt tgagatacag actgactgtg gcaacggata
    18661 cacctaaaag ctgtgccact tgtttttgtt gatagccttt gctatccatt aaggctctaa
    18721 gttcttggtt tttcatcgtt tagcctccca ctgctaactt tttttcgtaa tcctcttttt
    18781 ctgctcgggt caaaaaaatc ggttctactt cttttttcgg ttttcttgcc gttgccagca
    18841 agctaaaatc gtttttctgc tcaatggtta aaaccgggtt taattccgca ttaatctcat
    18901 caagctgttg ctgtttaagg ttggctcggc gtttatggcg ttctttacgc tgctgttcta
    18961 ccatcgccac cgggaatgcc tctcgggtgt taccgttcca aattgcctcg caaataaacc
    19021 tgccgtcttt ggtacgcacc tgcacgctct cggcattgtg aatatcaatc ccgatcacca
    19081 cttcttcacg gtcaaaatcc agtaatttca agttaaaata gtggttgtta ttccaactta
    19141 cccaacctcg atccggctta cggataaatt ccggtcggct catatcccgc aactcaatag
    19201 ggcttaacat caccacatct tctgcgtgca acatctgctg atatttgcgt gccggcgtgg
    19261 tacggatttc cgagtgaata tgctcgttgt tgtaccagtc aatcaccgat tggattactt
    19321 caatcaactg ttgccacgtt ggcaatttgc cttgggcttt acgttgtagt ggggttaatt
    19381 cccctttggc atttgccagt gagttcaccg catacagggt tttgcgaacg gtttccggat
    19441 ctgcaccggt tgcatagccg gtttcaaact gtcgggcaat cgtcataccg atggttttat
    19501 ttaagcgttc aataatgcct cgcccctgcg gattgcccgc aatccctgtt tcgtgtcgga
    19561 taccgaggcg gggcaacatc cccgtgattt ccgcatccaa aaatttattc ttttcaccac
    19621 caccgttatc cgagtagtag attgccggca caccgtgtag gctaatggcg tggcgtagtg
    19681 catcagccac cgcaaaggcg ttctcactga gtgccagcga ccagcccacc acttttctac
    19741 cagcaccatc gacaatcatt gtcagctcag gggtaaacgg cttaccgtgt atcgggtggg
    19801 ctactttgag cttcagtgag tgaccgtcac caatccatac atcatttgct cgaagtaccg
    19861 accaatcccg cttcacatag ctcagtaact gcttgtaatg cgagccggtg cgtctgccgt
    19921 actctttcac atacaacggc aacttattca tcgctcgctg tacttggctt aggctggggc
    19981 attgtgccaa cagtagcggg ttgtctgcat actgatacgc ccattccacc tcaaattctc
    20041 ggtaggcttc ggtgaggcaa ataccgtttt tctgccgata tacgcctaaa aaagcactta
    20101 gccaccaaat ttcttccggc ttggtctcct gccgtacctg tggggcaagc agtttcaacc
    20161 gttgctcggc gttctctgcc ttgcagtaat ccaccaccca gccgtttaag gttcgcaccg
    20221 agagtgtgcg ttttgccgtc tttttagcat ttgctacggc aaccagctcc gccaagtgcg
    20281 gtggcatttc gccttgtttg gcaaggttgc aaaggtaggt tatcgcttta atccggctca
    20341 ttgagccttc caactccaac acatacgcca ccagtgccat tcgtgcatca gcaatttctc
    20401 gctgtttggt ggtcaggttt cccacatcca cctctgcacg cactaccggt aactttttcg
    20461 gcttggcttc caccaccgcc gacataaagc gggagcggat ttcggtttga acttcggtgg
    20521 gtaaagagtt aatgtgatat tcaaaaccac ctcctttaac ccctttcaat ggacgagttg
    20581 cccattgttc ttttttggct tgtctagtta catttgttgg gtattttgat aagccactaa
    20641 tacctgctaa ttcttttgca ctaaaccaat ctttcataac agctatcctt gttatgcaac
    20701 atcagggtaa cgactaggcc atatttcggc tggcgttttt cctaatgctt ttgcgataat
    20761 ttcttcaccg tttttataag gtttatcaag agcatttctt actgttgttt tggaaagccc
    20821 attctcaatc cctaactgag aaaatgttat tcctttcttc atcaattcag ctcgaatatc
    20881 agctctatgc atatcttgag ctcttttctt tttattcatt ttgtgagatc ctccacattt
    20941 agtttatttg ctacgcttta gcgtacttga ttaactacag gactaaatat aatacttatt
    21001 cttttctaaa tcaatagtga tttaataaat tttttaaatc ttttttaaat ctatttgtaa
    21061 gctattgatt ttaaataact taatcaattt tgattttaaa atcatttttg attaagaagg
    21121 ggttaattat gaaatcattt gataaagttt ggttttcagc caaagaacta gaagaattgg
    21181 atttgcctga ccttccaaag caagcaacaa acattacaag aaaggcatta aaagaactct
    21241 ggataaaacg tgatgcagtt ggagtaaaag gtggggggaa tgaatatcac ataacttcat
    21301 tgcctcgtaa agcccaagaa gcactcggat ttaaaagtgg aataaatgca atcaaggata
    21361 gcatagtaag agagattaca cctgaagagc aaaacaaagg atctgaatta tcaggcaccg
    21421 ttttgaataa cataatctca atgattgata gttttgcatc tattaaagta tctgcaggct
    21481 ttgggagctt taatgaaggt gtaacaaaac ctgatggaca agagccttat gctgatagct
    21541 tgttgcatac gcttggtgtt aatgccaaga agtgtgctgt tttttgggca agtggagact
    21601 cgatgtatcc gactattgat aatggcgacc agctactagt tgatttaagt cgtaatgaga
    21661 tacgaggcga caataatatt tacattgtac aaaacggcga cagtgtttgg gttaagcgtg
    21721 taaaactgct atgggacggt gtagagctta tttcagacaa ccgagaagag tacgagttaa
    21781 taaagattac agcagaccaa gcccaaaacc tacaaatcat cgggcaagtg gtacacatcg
    21841 ggcattcttt agtttaaaac agatttaaaa tagttttaaa accgatcaaa cctatgcaaa
    21901 aaataacgca aaaactgctc gtttttttct aatcctgctc attttgtttt ttgcatagct
    21961 ccaaccaaac aataacggcg aacccttgta ttcacggggc tcgccgttat ttttccgccc
    22021 aaattttttt ctttctctct atgcaaaaaa gatcagtacc ccacaataaa acagtaattc
    22081 aaacctccag aattagaaca aaagttttac cccacttatt ttaagtgggg ctttttttat
    22141 tttataactc atcaaaatat tcatctcccc aagtctcttc tgctagcttg agtaaatttg
    22201 caaaatcttg gaaagaaggt accgcttgtg tttcttctaa tttgacttgt gccgaaatta
    22261 atttttgtct aagcgactca taccattcca ataatgataa agataacggt gatcttgccc
    22321 gttttccaag ccaatataac ccttgaaacg gaatagaaat ggcgaaaaca gcagtaagta
    22381 ccgaattggc taaaatagat tgggtcggat cggtaaagca atattgccaa actaatgcaa
    22441 agcaagcaaa agcaggcatt actttagagg aaaattttac caagcgaata atgtggtaat
    22501 ctggcataaa attggctaat tttttctgat tcggcagagt gttgaggtaa cgctgtcctg
    22561 catcaaataa gcttaacata ggattatctc tttcaaattt ttcttttatt ttagctaact
    22621 gattaaaatc tacaataggt taatgcagtt tggctcaagc cttgctatac ttcacaacaa
    22681 aatatttaca atctattgaa gggtatttta tgtcaattaa atttgtcgat ttattgcagc
    22741 aaagttggaa ctttatgcgt aatcaacaag cattttcact gtttgccatt gtcaccattg
    22801 tggttgtgca gttggttttt attttagtgt cgccaaattc gcctgagcta atggcggagt
    22861 cgcaaccgca acaacttcaa attgatgcct ctaaaatggt gtctatacta ttgccaacta
    22921 ttttattagg tgttgtcaat cttttgatca atgtcttaat gattttcaat atccaatcga
    22981 ttaacgatgg caattatcgt caatttttcc aaaatgcagg aaacgcatta aagcacttcc
    23041 tacctgtgct gttgttacaa tttgtgatgg tgttaccgct ttctctcggt gcatcttttg
    23101 caatggcatc gcctgaaaca gtgattattg cattgccggt gttggtagtc ggtttttatt
    23161 tttttatcaa attatcgtta gtgatttatg cttatttatt ggagaaaccg cagaaaagtc
    23221 tatcggaaag tattaaattt acgcttcaat tatcacgtgg aaaaatgcta ccgctgattt
    23281 tattttgtgt gatttcttat ttattaccgg ggatgttatc tcgtttgttc acagtgtttg
    23341 gtaatgactt tattggcata ttcattacca ttgttttaag tgcggtaatt aacgtcttta
    23401 tggcgatttt cagcttccgc ttttaccaag tttaccgcca aatgccggca gtgcgttagg
    23461 agtatcaatg aaacagttac ttgaatttat tccgctgatt ctgttttttg tcgtgtataa
    23521 aatgagcggt attcagatgg cgtctatcgc attggttatc gctacaatcg tgcaaatgat
    23581 cgccttaaaa atgctctacg gcaaaattga aaaacagcaa attattatgg gtggctcggt
    23641 ggtctttttc ggcttactga gtgcctattt taatgaagtt aaatatttac aatggaaagt
    23701 aaccattgtt tacgctctgt ttgcattggt gctattagtg agccaatttg tgttcaaaac
    23761 accattaatc aaaaaattat taggcaaaga aattcagttg cctgaagcag tgtggaataa
    23821 aataaacttc ggttgggcag tattctttct gatttgtatg ctgctgaata tttatatcag
    23881 tcaatattta tcggaagaga tttgggttga tttcaaatcc tttggcatta ttggcttaac
    23941 cttagtcgca acggttatta ccggtttcgt cctttaccct tacttaaaag atgctgaaaa
    24001 gcaggaacaa aaaaatgaaa gataaaccct atggaaaagc cccggaaggg aaactgattt
    24061 taagaacttt ggcaatgccg tcagatacta acgccaatgg cgatattttc ggcggttgga
    24121 ttatgtcgca gatggattta ggcggtgcaa ttttagccaa agagttggca aaaggtagag
    24181 tcgttacggt aacggtagat aaaatgattt tccaccgccc gatttcagtc ggtgatgtgg
    24241 tctgctgcta cggcaagtta atgcacatag ggcgttcttc gatgcaagtg aaagtcgagg
    24301 tctttatcaa acaagtttat gagggcaatc gcgaacgtta tctcgtaacc gaagccttat
    24361 ttacctatgt agcgattgat aaagaaggca aaccgcgtgc tgtgccgaga gaaaataacc
    24421 ccgaattaga cgaagcatta tcgctaattg atttaacccc tgaaaaacaa ggagaatagt
    24481 atgtattatg ttatctttgc ccaagataat cccaatatgt tggaaaaacg tttagaagtt
    24541 cgcccggctc atttggctcg tttggaaaaa ttacaggcag aaggtcgatt attaatcgca
    24601 gggcctaacc cgactgaaga cggctcaagc gtaaccggtt caactgtaat tgcagagttc
    24661 aactcacttg aagaagctca acaatgggca agccaagatc cttatgtgga agccggtgtg
    24721 tatagcgatg tgattattaa accgtttaaa agagtgtttt aattttttct cccctcttta
    24781 gaaaagaggg gctgggggag atttgattac gatattaatg tttcgtatga gagtaaaatt
    24841 acctctgcca aatctcccct aagccctctt tgctaaagag gggaattgat cgagcgtaaa
    24901 attctatcta ttttcaattt tgagcctaaa tttatgctta ccaccctaat tcccttatcc
    24961 caactcaatt taccgcccaa tttgcaaaat tctgagcaaa ttcaaccgct tgtgacggcg
    25021 atttcgcttt ccaatttcgt gcatcaaacc ttgcaaaaac agccggattt actggcagaa
    25081 tggcttgcca agtttcctac gcctgatgat tgctgcaatt atactgagcg tttagcaaaa
    25141 atattagcaa gagtggaaaa tgaagaaatg ttggggaggg ttttgcggca atttcgccac
    25201 cgtgaattgg ctcgtctgag ctttattcag tcaaataaat tagcgacggt agaattggta
    25261 tttcagcatt tgtcggattt agccgagagc ctgattctag ccgctcgaga ttggttgttt
    25321 cagcgttgct gtgccgaata tggcacgcca aagaacactc ttggcgaaac acaagaactg
    25381 ctgattttag gtatgggcaa attgggcgga cgagagctta atttttcttc cgatattgac
    25441 ctgattttta cctaccccga tattggtgaa accgaaggtg gacgcaaatc gattgaaaac
    25501 agcaaatttt ttacccgaat ggggcagcgg ttaattaaag tattagatga gatcaccgct
    25561 gatggtttcg tgtatcgtac cgatatgcga cttcgcccct ttggtgatag cggagccttg
    25621 gtgctgagtt ttactgcaat ggaagattat taccaagagc aagggcgtga ttgggaacgt
    25681 tatgcgatga ttaaagcaaa aattttaggc gaggatagcc aaaatttaaa tcatcgctat
    25741 ttaaagcaaa tgctccgccc ttttgtttac cgccgttatc tggatttcag tgcaatccaa
    25801 tcgttgcgtg aaatgaaaga aaaaatcagc cgtgaagtgg ttcgccgtaa tttaaccgat
    25861 aatattaaat ttggtgccgg tgggattcgg gaagtggagt ttatcgccca aactttccaa
    25921 atgatccgtg gcgggcgaga taaaatttta caagaacgta gcctgttaaa agtgctacca
    25981 cgcttggcag aattaaattt attaacccaa acgcaggtgg aaacgctcca caatgcctat
    26041 attttttacc gtcaaattga aaatgtatta caagcgattg acgataaaca aactcaaacc
    26101 ctacccactg atgaagcctc gcaagcccgc cttgtatttg cttgccaaag ctattatcag
    26161 caagatctat atagcgaaaa aacgcattgg gtggagcatt cctttaacga ttggcaacaa
    26221 tttatggcag tattgagcca atatcaacaa gcagtacgcc agatttttaa tgaaattatc
    26281 ggtgaagagg aaacacaagc caactgcaat ccggttaatg aaaaattagc cgaatggaaa
    26341 gacattttgc actataacat tcgccttgaa gatttatccg cagtgctaaa aggttatcca
    26401 aaggttgcag aaaatgatta tacggagatt ttccgtcact tttctactac ctttcaagat
    26461 tgggtaaaac gcccgattgg ggtaagaggg cgagaggtgc tacgcaattt aatgcctaga
    26521 attgccgaca gcatttttaa aggtgaagat catttattgt tattgcctcg cgtgttgaat
    26581 attgtcgata aaatcaccac ccgaactacc tatttggaat taatgctcga aaaagagcag
    26641 attctgcctc aacttttagc attgtgtagt aagtcggtta tgattgcgga acagatagct
    26701 cgatatccaa tgctacttga tgagctgatg agccatagag gcttaaccga cgtgcaggct
    26761 tttgaaaaat atcaatctgc cttgcaggat tatttaatcc gcattcctga agaagatgaa
    26821 gaagcactga ttgatggctt acgtcagttc aaacaaaccc aaattttacg catcgccgct
    26881 gctgatattt taggcgtgct gctggtaatg aagatcagcg atcatcttac ttacttagca
    26941 gaagcgatta ttaatgcggt ggtaaatatg gcgtggaagc aagtcagcca acgctttggt
    27001 gtgccggaac atttagaggc tgatgaaaaa gggtttgcag ttattggcta cggcaagcta
    27061 ggcgggattg aactgggcta taattcagat ctcgacttgg ttttcttgca taatgcccca
    27121 gaggatagcc aaactgttgg cggtaaaaaa gagatttcaa gccatcaatt ttacttaaaa
    27181 ttggctcaaa aaattaactc gatttttaac cttaatacca gtgccggcgt actatatgaa
    27241 gtggatatgc gacttcgccc atcaggcgag gctgggcttt tagtcagcac tttcaatgcc
    27301 tacgagcatt atcaaaaaaa tgaagcgtgg acgtgggaaa gccaagccct cgtgcggaca
    27361 agatgtgtat ttggggcgga aaacctcaaa caagcctttg aaaaaatccg ccaaagcacg
    27421 cttgctcagc ctcgtgcaag cggtcaatta cgccaagaaa tttgcgaaat gcgacagaaa
    27481 atgtaccaac atttaagctc gcattcagcc gagcaatttc atattaaaca agatcaagga
    27541 ggtattaccg atattgaatt tatcgcccaa tatttggtat tagcccacag ccaccaacac
    27601 ccgaaaatgg cagtatggtc ggataatgtc cgaattttcg acagcgcagt agaatgcggt
    27661 attttaagtt ccgaacaaag cgaacagcta caacattgct acaccgcact gcgtaacaaa
    27721 atccaccacc taaacttatt acgcaaagac agcgtggtgg acgcaagtga atttaccacc
    27781 gagcgagcat ttgtgcggga aatgtggcag aggttattag cataaattta gggcgtacat
    27841 tgcacgccct aatatagatt acgccgtttc ggtgatagcg aactctccgg cgatctcttc
    27901 cgcttgttgc aacacaaact caatcgcttc cgcctgtaaa tcgggcgggt atttataggt
    27961 acgcagagca atgcggatta aggttcgcat tttggcacga accgagtctt tatattgcca
    28021 atctacggtg accgatttgc gtaatttatc ggtaatgtct ttggcaagtt tcatcaatac
    28081 ctcatcgccc atttcccgca ccgcactttc attacgtgcc aaagcatcat aaaacgccat
    28141 ttccgcaggg cttagtccca acgcttcccc tcgtttttgg cgggcttcaa actctttggc
    28201 gagggcgatc agctcttcta aaatttccaa tacgcttaaa ttgtggttgt ggtattggtt
    28261 catcgcctct ttgagtttct gttcaaatgc tttttttgtg gcaagattgg caccgctttg
    28321 ctctcgcagt tgtgaggcaa gataacgctc cattgctgat agccacaaat ctttggttgg
    28381 gctgtttttt actgtttcca aaaactcatc agaaagcagg ttgatgtttg ggcggtcttt
    28441 tttcagcaaa tcaaataaat ccaccacacc atccgactgt accgcacgat tcatcaaggc
    28501 ggtaagctgc aacaagcggt cattttcgct cgaagaattg cgaggagcgg tgctgttttt
    28561 gataatggtg gcacgcactg catcataaaa cgccagttcc tgtttatagg gttcaactgc
    28621 ttttaatgcc ccacacaaag cataaccttt tttcgccaag cgtaccgatt gcaaaaaggc
    28681 gtttttgcgt ggggttttgt ctttggcagt gttatcaggt ggctgaatgc ggtctagggc
    28741 aagaatatgg ttggctgatg tcaaaatcgc attgagcagt ttaggcggtt cgctgatttg
    28801 caacattttg gcaatatcaa ccgcttgtcc gtcaatcggt gtggcaaatt gcccatgaat
    28861 gaccgtgata tgttccacca ttttttccag caccgctgaa atgtcccgca ccggcttttc
    28921 tttaccgcct gcgttggtgt actgcttcat cgctttttcc agctcatcgg tcaagcccac
    28981 ataatccaca atcaagccgc cattttcacg gcttttgttg cgaaataccc gatttacccg
    29041 agcgattgcc tgcatcaggt tgtgtccgct cattggttta tcaatgtaca ttgtgttaca
    29101 gcagggcgca tcaaagcctg tcagccacat atcccgcaca atcacgatgt tgagcggatc
    29161 gtctgggtct ttaaagcgtt tttctaaggt tttcttatcc tgattgtgtt tttgccactc
    29221 ggcagggtcg ctggcattac ttgtcatcac aattttaatg ctgccttgaa gcacatcgtt
    29281 tgagtgccat tctggacgaa gtgcggtgat tttttcgtac aatttcacgc aaatggcacg
    29341 gctcatcacc acaaccatcg ccttgccgtc ttgctgtttg gtacgctcat cgtaatgggc
    29401 aataatatct tccgccattt tttgcaaacg gctatccacg ctgtgcagtt tttcacgcag
    29461 gcggaagtta tagctgtttt catcgtcatc aatcagttgt tgtgcctctt ccatcacttt
    29521 ggaaaactcg ccactttcgc ctaagctgat ttggcgtggc tcataaataa tcggcacggt
    29581 tgccccatct tccaccgcat cttcaaaatc ataaatcgag acatatttac cgaagacttc
    29641 ttgggtgtct ttgtcatcaa gttcaatcgg tgtgccagta aagccaataa aagaggcatt
    29701 cggcaatgca ctgcgtaaat gcttggcata accctcacga tactcgcctt tgtggttgat
    29761 tttttggcta aaaccatatt gtgagcggtg tgcttcatcg gtaatcacaa tgatgttttc
    29821 ccgctcgttt aatacagggt gggcaagctc accctccatt aagccgaatt tttgaatggt
    29881 ggtaaaaatc acaccgcctg ccgaacgact ggcaagggca gagcggagtt cgtctcgccc
    29941 atcggcttgg attggcgttt gtttgagcag tgcctcgcca ccgcaaaaag tggcgtaaag
    30001 ctgaccgtcc aaatcgttgc ggtcggttac caacaccaaa gttggatttt tcaggctgct
    30061 ttggcttaat actttacctg cataaaacag catcgaaagc gatttgcccg aaccttgcgt
    30121 atgccaaaac acgccgattt tgcggttgcc tgtggcggca agcaaggtgc aatccaccgc
    30181 ttcattcacg ccataaaact gatgatatgc tccgattttc ttaattaagc ggtttttgcc
    30241 gtcccgttca aacaccacaa aattctgcac ataatccaag agatttttgg gtgtcatcac
    30301 gccttgcagc agggcggtga gttcatcttc aaacacaatg cgtttgctct gatttttttc
    30361 atcaaccaca cgccaagggg taaaacggtc gaaatcagcg gtcagcgaac cgatgcgggc
    30421 gacaatgccg tctgaaatca cgagtgcctg attaaacaca aacaaatcag aaatttcatc
    30481 tttataggtt tgcagttggg caaacgcctt gccaatgtcg gcattttctt tgagcggatt
    30541 tttcagctca aacaccacca gcggcaagcc attaacaaag ccaatcaaat ccggaatgcg
    30601 tttgcctttt ttgccgctaa tatccagctg attgacaatg cgaaaatcgt tattttctgg
    30661 acgctgaaaa tcaatcagct gcaccacatc agacacctgc tcaccgtaca actgataagt
    30721 gattttgacc ccatttctta gccaatcata agcctgacga ttacgctccg ccaaatcgcc
    30781 actgtcggca cggcacacct gtgccaccac attttccacc tcacaagcgg gcaaattcgg
    30841 gttgaatttt gcaatcgctt gcgccaaaag cggctttaaa atcacctcag cggttcgctc
    30901 ccgccattcg tgttctaaac ctgccaaaat ttttttgccg taggtgtagt cccagcccaa
    30961 gctttgcaaa gttgcaatgg cggattgttc aatggtgttt tcgttgatgg taatcatcac
    31021 aactccatct ccccacttaa taatttaggt aataacttat ctctaatttt agataagtta
    31081 ttattttgaa taatattttc ttttatctta ttaaaaatac cttcaatata ttcattaaag
    31141 tgattaataa ctagaactga tggttctaaa atttccatct cttttatcat ttttgaattg
    31201 actgccgttg cgattgatga tgtacttcct agattattaa aatcaaaatt ttttaagtag
    31261 cagtataaaa actctgagct tagatttgat gagctaggaa ttttaaaatg agcaatagct
    31321 tcgttagtag ttgtttcttt tgtcgtaatt gaaactcta
//
LOCUS       DANMCL010000021        30943 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.021, whole genome shotgun sequence.
ACCESSION   DANMCL010000021 DANMCL010000000
VERSION     DANMCL010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30943
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.021"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            102..1238
                     /gene="ompA"
                     /locus_tag="PXF40_000869"
     CDS             102..1238
                     /gene="ompA"
                     /locus_tag="PXF40_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_119863613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HDL5802236.1"
                     /translation="MKKTLVALAVLSAAAVAQAAPQANTFYAGAKAGWASFHDGLTQF
                     DNTYDYGSGINLGINLGINRNSVTYGVFGGYQILNQNNFGLATELGYDYFGRVRGNTT
                     FSGDDKEKTAAKHSAHGAHLSLKPSYEVVPNLDVYGKVGVALVRNDYYVQQHVDKDSR
                     IKVHNLKPSLLLGAGLEYAITPELAARVEYQYLNRVGNLDKAVRTTVGYLIPRGTNFQ
                     YSPDIHSVSAGLSYRFGQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDA
                     AHAEISNLGLANLAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAV
                     GYGEANPVTGHTCDAVKGRKALIACLAPDRRVEIQVQGSKEVTM"
     gene            complement(1304..1750)
                     /gene="matP"
                     /locus_tag="PXF40_000870"
     CDS             complement(1304..1750)
                     /gene="matP"
                     /locus_tag="PXF40_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HDL5802237.1"
                     /translation="MRYQKLITQETTWKWQYLLKKHREGENITKYEEQSLIDLKVQFL
                     STLQNSPDEVEKWIKSEMTPEQRKKMRQSVRAKRKRFFNAEKQTTKKKSIDLEYSSWL
                     RLSKYAKSQKLTLSEAIVKLTDELENKQLYLEQVAKMKSSLKDLLK"
     gene            1843..3480
                     /locus_tag="PXF40_000871"
     CDS             1843..3480
                     /locus_tag="PXF40_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5802238.1"
                     /translation="MTLSLLSSQKLVMQNDFSRLDEKLNFLDFQPQAKQALNQFLQSQ
                     FGALLVLKSELFPEFINEITEYLKKYSVDLPIISKMDFNKNSLFGYSVFLERELKTEY
                     VKGAIHEADKGILIVNIRSLLLDITQWDKLKQALLFGEYEPNSVNHSPYLSAKEKSTF
                     KLILVGEREDISTLSAYDDGLYQFGQYTEIKSYLSLSDNVEQWGGYVQNYAENLINKR
                     LTSTALNQFLQAYIRESESRELVSISPTLLRKHLLGIQNFYPNVTEIDEVKGYFDYLE
                     QQSSILNQYTVGDILTNQLYIETEGEEIGQINGLSVIEFEGIPHSFGEPLRMSCNVQY
                     GDGEITDIERKVELGGNIHSKGIIIAQSCLANLLELPTQLPFSASIAFEQSYGEIDGD
                     SSSLAIFNVLVSALAKVGLPQSIAVTGAIDQFGNVLSVGGVNQKIEGFFNICHARQLT
                     GKQGVIIPAACVSHLSLSSEVVEAVEQGLFKIWTVENVFDAIAILFERDFYDDEKAPN
                     SAQTALFTLIHQNLDERESEETSGSFLSKICKKIKLD"
     gene            3593..4123
                     /gene="fabA"
                     /locus_tag="PXF40_000872"
     CDS             3593..4123
                     /gene="fabA"
                     /locus_tag="PXF40_000872"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017807287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HDL5802239.1"
                     /translation="MNSCTPIIKPSYTYEELLLSGKGELFGEKGPQLPAPPMLMMDRI
                     IEMNQEKGNFEKGYIEAEFDIKPDLWFFNCHFINDPVMPGCLGLDAMWQLVGFYLGWI
                     GGEGKGRALGVGEVKFTGQILPTAKKVTYRIHMKRVVNRKLVMGVADGEVEVDGRVIY
                     TATDLKVGLFQDTTAF"
     gene            complement(4191..5117)
                     /gene="rfaD"
                     /locus_tag="PXF40_000873"
     CDS             complement(4191..5117)
                     /gene="rfaD"
                     /locus_tag="PXF40_000873"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HDL5802240.1"
                     /translation="MIIVTGGAGMIGSNIVKALNEIGRKDILVVDNLKNGEKFINLVD
                     LDIADYCDKEDFIASIIAGDDFGEIDAVFHQGACSATTEWDGKYLMQNNYEYSKELLH
                     FCLDRQIPFFYASSAATYGGRSDNFIEKREFEGPLNAYGYSKFLFDEYVRRILPEAES
                     PVCGFKYFNVYGPREQHKGSMASVAFHLNNQMLKGENPKLFAGSEQFLRDFVYVEDVA
                     KVNLWAWQNSISGIFNLGTGKAESFQEVANAVIKYHGKGEIETIPFPDHLKSRYQTFT
                     QADLTNLRAAGYTGTFKTVAEGTAEYMAWLNR"
     gene            complement(5211..5723)
                     /gene="def"
                     /locus_tag="PXF40_000874"
     CDS             complement(5211..5723)
                     /gene="def"
                     /locus_tag="PXF40_000874"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HDL5802241.1"
                     /translation="MAILDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEG
                     IGLAAPQVGVLKRVITIDIEGDKTNQVVLINPEILESSGETGIEEGCLSIPGHRALVP
                     RKEKVKVKALNRQGEEIIIDADDLFAICIQHEIDHLNGVLFVDHISNLKRQRIKEKMQ
                     KLKKQIARAK"
     gene            5812..6960
                     /gene="dprA"
                     /locus_tag="PXF40_000875"
     CDS             5812..6960
                     /gene="dprA"
                     /locus_tag="PXF40_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HDL5802242.1"
                     /translation="MAYHYDLLRLLQVPQMGAQRIGRLLAELNFAEFCHYDKLQLKQI
                     GWNEKQIQRWFNPDQKWIDQAMTWSELPNQQIVTLFDENYPFLLKQISTAPPLIYVKG
                     NVESLSLPQIAIVGSRDYSHYGEYWAGQFAAELARHNIIITSGLAIGIDGFAHQKIVM
                     EQGITIAVLGSGLNQVYPARHKKLAEQIVDLGGALVSEFSPNQPPVAENFPRRNRIIS
                     GLSLGTLVIEATLNSGSLITARYALEQGREVFALPNAVQNPYAQGCHKLIKEGALLVE
                     GVEDILEVVASQYQPQQIPLFDESKPTVSTSLQAVKNSEKFAKNLPSLTACQQQIYQH
                     ISLEPMAIDDLAKVTELTIEILLVELLGLELAGVIKQVSGGYVMDNGY"
     gene            complement(7055..8405)
                     /locus_tag="PXF40_000876"
                     /pseudo
     CDS             complement(7055..8405)
                     /locus_tag="PXF40_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013745980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
     gene            complement(8418..8687)
                     /locus_tag="PXF40_000877"
     CDS             complement(8418..8687)
                     /locus_tag="PXF40_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HDL5802243.1"
                     /translation="MKIMAVCGSGLGSSFMMEMNIKKVLAKLGVEAEVSHTDLSSVVA
                     DDADLFVMAKDIAASSNVPKEKLIVVKNIVGLAEFEEKLTAYFNQ"
     gene            8918..9940
                     /locus_tag="PXF40_000878"
     CDS             8918..9940
                     /locus_tag="PXF40_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5802244.1"
                     /translation="MANGTSRNRRSSGRVTLADVAKVVGVGQMTVSRALRTPEMVSEP
                     LRKRIEEAIIELGYIPHFSARQLASAESHNLVIVTTSISSTENTLILSALRKSVADSA
                     LQMVILIADQESWFQELINHAPQAIVFLNLDCPPNVREWIKNSNIPTVEIGAIKKEPI
                     HLSVGIDSHEAMEKMIHFLVKKGYREIGLLSAKQDLSIFKQYLESWHTTLFAHHISPL
                     KIHHVVEDISFSAGATLLTEALLNWEAIDALVFLSDELACGALYEALRRHMSIPKDLA
                     IAGLGGLEVGSISYPKLTTIAIPYEQMGKIAGKQLLTLLSGKTLSAEEMIVKLPNKLV
                     IRDSAA"
     gene            10053..10466
                     /gene="secE"
                     /locus_tag="PXF40_000879"
     CDS             10053..10466
                     /gene="secE"
                     /locus_tag="PXF40_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HDL5802245.1"
                     /translation="MATEIKTKTPEQVEQKGGKSKGANTALWLVAIVFLAVAAVGNAY
                     FSSHFSLIVRVLLLVVLLVGAVALAAITNQGQKAIHFIKESRTELRKIIWPTRPEATQ
                     TTLIVLAMCVVVSLVLWGIDSIIVALITFVTSLRF"
     gene            10468..11031
                     /gene="nusG"
                     /locus_tag="PXF40_000880"
     CDS             10468..11031
                     /gene="nusG"
                     /locus_tag="PXF40_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HDL5802246.1"
                     /translation="MSEVEVKENGSKRWYVLQAFSGFENRVAVTLREYIKLHKMEEQF
                     GEVLVPTEEVVENVGGKRRKTERKFFPGYVLVEMEMNDDTWHLVKSVPRVMGFIGGTA
                     DRPAPITKREADRILNRVQETAEKPRHRKEFQPGESILVTEGPFADFSGTVEEVDYEK
                     GRLKVSVSIFGRATPVELEFSQVEKQS"
     gene            11264..11692
                     /gene="rplK"
                     /locus_tag="PXF40_000881"
     CDS             11264..11692
                     /gene="rplK"
                     /locus_tag="PXF40_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HDL5802247.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     RTESLEKGLPIPVVITVYADKSFTFVTKTPPAAVLLKKAVGIKSGSGKPNKDKVGTVT
                     QEQIRQIAETKAADMTGATIETKMKSIAGTARSMGLIVEE"
     gene            11697..12386
                     /gene="rplA"
                     /locus_tag="PXF40_000882"
     CDS             11697..12386
                     /gene="rplA"
                     /locus_tag="PXF40_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HDL5802248.1"
                     /translation="MAKLTKKMKAIKAGVDSTKAYDINEAVEVLKKFATAKFVESVDV
                     AVNLGIDSRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAE
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQ
                     IRYRNDKNGIIHTTIGKADFSAEQLKDNLNALLAALTKAKPTTAKGIFIKKVSISTTM
                     GAGVAVDQASL"
     gene            12448..12867
                     /locus_tag="PXF40_000883"
     CDS             12448..12867
                     /locus_tag="PXF40_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802249.1"
                     /translation="MLRLLSFCFIFLLSACTVLPQIKQLPPQVESVKSFKVENNGQQS
                     LLLIQFYENKWRWIQTDPLGAPIARVWLTKKGWEPDGFVMPNKQAQLLFTALVNALNP
                     HSPPFYLDKGWKIEREKSQFTIWLPDSSKWKVEILGE"
     gene            12954..14176
                     /locus_tag="PXF40_000884"
                     /pseudo
     CDS             12954..14176
                     /locus_tag="PXF40_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005544283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
     gene            14169..14573
                     /locus_tag="PXF40_000885"
     CDS             14169..14573
                     /locus_tag="PXF40_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005557532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydratase"
                     /protein_id="HDL5802250.1"
                     /translation="MHKFTFPIEQIAPLVPHSGNMILLDRITAFGEDFLTAETNIRPD
                     NPLIKHGKLATYASIEIMAQAGEPVRLGYLLGTRKLHLHRQEIPIGSQLQIQIKMSIQ
                     DATGFGVFDCQLIDLADNQVLLEGALNVFSPK"
     gene            14673..16106
                     /locus_tag="PXF40_000886"
     CDS             14673..16106
                     /locus_tag="PXF40_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5802251.1"
                     /translation="MQEAYDIQHLCTRKEDKSFDRKSARKEPKEILRHLIGFANADGG
                     LLVIGIEDNGEITGFNYQKAHQPEEFIHALHNLQKMPIPVTYQQIEVVNSRGLADFVL
                     LFEVTASSGRVITSHDDRVFLRSKDQTLELNFEQRLQLEYEKGQRAFEEQPIARADFT
                     DLDMDLLEQYRQKLHTDRSIEEILKARDLINKEGQITNACILLFGNNPTRYFPNARLR
                     FLRYEGKAPLTGRTFNVVKEFMLEEPIPKLLESAKAVLKSQLREFQRLDENGQFTKID
                     EYPEFAWLEGIVNAIAHRSYSNQGDCIRISMFDDRLEIFSPGGLPRPVTLENMYYTRF
                     SRNPKIARVLYEFGWVKELNEGVNRMAEEMNAYQLNTPSYFEPNENAVRLILENNIEH
                     RTLRALERIEEIFTQDIMATLNKNEVTILQYLYENEMITVKIASEILDRSKELSRRIL
                     KSLEQKNILTWHGLSPKDPTQYYTLKK"
     gene            16120..16848
                     /gene="fabG"
                     /locus_tag="PXF40_000887"
     CDS             16120..16848
                     /gene="fabG"
                     /locus_tag="PXF40_000887"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5802252.1"
                     /translation="MNNTVLITGSSRGIGKAIALTLAQQGFDIVVHCRSRVEEAEAVA
                     QAVRNLGKNARVLQFDVADREKVRSILEADVEQHGAYYGVVLNAGLTRDNAFPALTDE
                     DWDSVLRTNLDGFYNVLHPIMMPMIRRRKAGRIVCITSVSGLIGNRGQVNYSASKAGI
                     IGAAKALAIELAKRKITVNCVAPGLIDTDILDENVPIEEILKMIPAGRMGDPDEVAHA
                     VAFLMDEKATYITRQVIAVNGGLC"
     gene            16911..18056
                     /locus_tag="PXF40_000888"
     CDS             16911..18056
                     /locus_tag="PXF40_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HDL5802253.1"
                     /translation="MKRVVITGIGVVTAFGKEWAEIHGYQPPKHWNRKQLRSLGRVSQ
                     FVVEASERALAQAGLLDENGVIFDWLKDRRMGVACGSSTGSTNDIKDAAELLMTGKSD
                     GFNANTYVRMMPHTTAANIGIFFGLTGRIIPTSSACSSGSQGIGYAYEAIKYGMIPMM
                     LAGGGEEFCASKVYVFDSLYAASRRNDNPKGTPRPYDKDRDGLVIGEGAGMFVLEELE
                     HALARGANIIAEVVGYGANSDGSHVTRPQATTMQRCMELALKDAGIQPNQVGYVNGHG
                     TATEQGDIAETQATTAVFGKIPLSSQKSYLGHTLGACGALESWFSIEMMRDGWFAPTL
                     NLENVDERCGDLDYLQGDGREIHTDYVMNNNFAFGGVNTSLIFKRWK"
     gene            18070..18975
                     /locus_tag="PXF40_000889"
                     /pseudo
     CDS             18070..18975
                     /locus_tag="PXF40_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dialkylresorcinol condensing enzyme"
     gene            18998..20140
                     /locus_tag="PXF40_000890"
     CDS             18998..20140
                     /locus_tag="PXF40_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HDL5802254.1"
                     /translation="MLSNVYITNTSAFLPNAPVSNDAMEAVLGMVGETPSRVRKMILR
                     SNGIQHRYYAIDPITRQATHSSTELAVQAVKKLGNSATSATCLAVGTSYPDQIMPGQG
                     VMVHGLLDAEPMEVLTTAGVCVAGMAAMKHAYNAVRIGEHRAAIATASETASAIMRSE
                     HFRAEIDHKKLDDARPEIGFEKDFLRWMLSDGAGAVLLANQPNEKGLSLKIHWIDLVS
                     YANEMPVCMYAGAEFIDGNYTGWKAMSEAQRAECSAMAVKQDVKLLNENIVKYTVEKA
                     LERIIPKYKLNAEEIDYFLPHYSSGSFRDKLLEGLQRINFLIPQEKWFTNLTTKGNTG
                     SASIYIMLDEFIRTHDLKQGQKILCYVPESGRFSSCFMLLEAVVNS"
     gene            20189..20404
                     /locus_tag="PXF40_000891"
     CDS             20189..20404
                     /locus_tag="PXF40_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HDL5802255.1"
                     /translation="MDINDIPQDNSKIFNGERKVIYARNPQPEIRQMISSILACYAWD
                     ENNPFVAKSDARLKALAEVVGKAEIGD"
     gene            20685..21176
                     /gene="rplJ"
                     /locus_tag="PXF40_000892"
     CDS             20685..21176
                     /gene="rplJ"
                     /locus_tag="PXF40_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HDL5802256.1"
                     /translation="MALNLQDKQAIVAEVNEAAKGALSAVVADSRGVTVEKMTELRKA
                     AREAGVTMQVVRNTLLRRAVEGTEFECLTDTFTGPTLIAFSNEHPGAAARLFTEFAKT
                     NKEFELKGAAFEGKKQDVAFLATLPTYEEAIARLMGTMKEAAAGKLVRTLAALRDQME
                     AAA"
     gene            21235..21603
                     /gene="rplL"
                     /locus_tag="PXF40_000893"
     CDS             21235..21603
                     /gene="rplL"
                     /locus_tag="PXF40_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HDL5802257.1"
                     /translation="MSLTNEQIIEAIASKSVSEIVELITAMEEKFGVSAAAAVAAAPA
                     AGAAAAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISK
                     AEAEALKKELEEAGAKVEIK"
     gene            complement(21710..22540)
                     /locus_tag="PXF40_000894"
     CDS             complement(21710..22540)
                     /locus_tag="PXF40_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5802258.1"
                     /translation="MVQKPLNHYLEMQEHFLYVPYLHHHRRIRVLLPKDYHNEGWERY
                     PVLYMHDGQNVFYSKESYSGHSWKIIPTIKSHQELPKMIIVGIDNAGANRLNEYGPWK
                     TTTGSTPETRNAGGLGEEYAKWVVETVKPFIDIHYRTKPQQEHTLLAGSSMGGIITAY
                     MGSRYPHIFGHLGVFSLASWFSEPDFLRFTHQYPLQPNTKVFIQVGTNEGDEIDSHFI
                     SNTNQTYIDCSLNYYQALIRIGVPLDNIRLRIMANEIHHEMHWADHFVEFLHFSLLRK
                     "
     gene            22766..24307
                     /locus_tag="PXF40_000895"
     CDS             22766..24307
                     /locus_tag="PXF40_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HDL5802259.1"
                     /translation="MQASLQDILEVVKAKNLTYQQKLMSLGNIAERLFNPIELLGYTE
                     EEWEHIENQMICDLNEGYAIYRPRYILPDYNVYMQKGCQFLDLPPPTNLDEALDGLLI
                     LYSHVPSITTFPVYIGRLDQLLEPFITDEEQDYIKIKRFLNHIDKTISDSFCHANIGP
                     NDTKAGRLILKAVIELENITPNMTIRYDKTKTSREFAELAAKACLLVSKPSFANDAYY
                     IQDLGEEYGIASCYNALPECGGAYTLTRLRLGTIGRACASVEQMVNEMLPKVAKLALS
                     TMDKRHKFLVEESNFFESSFLVQEGFIKRTNFTSMIAIVGLADAVNHLLKQEGLNETF
                     GQSKRGDEIATLIMDKLQAVNDAHKGLYVERTNNQYLLHAQVGANNHAEDKMNTPAHR
                     IRVGEEPTLLAHLKQSAPFHKYFPSGTGDLFAFDQTYTDHLDAVVDIIDGSFAQGYRY
                     ITTYLKNTDLIRVTGYLVKKSEVERYRKGEAVLRDTTWYGSGTDDCAKVFDRQLRDEE
                     NVNAG"
     gene            24310..25098
                     /locus_tag="PXF40_000896"
     CDS             24310..25098
                     /locus_tag="PXF40_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S cluster-binding domain-containing
                     protein"
                     /protein_id="HDL5802260.1"
                     /translation="MAALSEIFVPLHRIIPFSNVEGQGNRTSIFLQGCKLNCLYCHNP
                     ETIPRYSKEAKQVSLQYLYDQVMEAVPFIRGVTISGGEPTIHHKKLVPLFEALREQGL
                     TCYLDSSGFFDFEATEPLINVTDKFLFDLKGDGAGLQTLCFDRKNQAGKVPEQALPNV
                     NHIKPENLARNLQNLAKLLPLDKVEEVRLVYLNEFYNAHHLLEKVADLLKPYPDVLLK
                     IIRVHTKGARDETGLARFVPTIEQTDELAAFAKRHGIQKVITIY"
     gene            25111..26368
                     /locus_tag="PXF40_000897"
                     /pseudo
     CDS             25111..26368
                     /locus_tag="PXF40_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005760733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
     gene            complement(26447..28456)
                     /locus_tag="PXF40_000898"
     CDS             complement(26447..28456)
                     /locus_tag="PXF40_000898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5802261.1"
                     /translation="MSAENMPSVIRFEQAVAKKDYESACTELLSILSKLDSNFGGISN
                     IELNMPEQIENLENDKAIYFCTRMAVAITRLFEDPALEISEHGAMRFLTLQRWIALIF
                     ASSPYVNADHILRTYNRNKESANPNTVDLDATLQALIKFCILYLPESNILLNLDAAWN
                     ASSDLTASLCFALQSPRFIGTSSAFAKRAAILQWFPEKLAQIENLNKLPSAISHDVYM
                     HCSYDIEANKHNVKRSLNAVIRRHLLSVGWEDRKIEQLGTRNNKPVMVVLLEHFHSSH
                     SIYRTHSTSMVAAREHFHLIGLGSDAVDEMGQQVFDEFHLLPQDGSLFDRLSFLKDIC
                     DKNNPAVFYMPSIGMDLTTIFASNTRLAPIQAVALGHPATTHSDFIEYVIVEDDYVGS
                     ESCFSEQLLRLPKDALPYVPSALAPQNVVYNLRENPEVIHIGIASTTMKLNPYFLEAL
                     KAIRDRAKVKTHFHFALGQSSGITHPYVERFIKSYLGNDATAHPHSPYDEYLNILHNC
                     DMMLNPFPFGNTNGIIDMVTLGLVGVCKTGPEVHEHIDEGLFKRLGLPNWLITQTAEE
                     YVTQAIRLAENHEERLAIRRDIIENNKLQTLFSGDPRPMGQIFLAKVQAWLADKNSKN
                     AEVEVKTKKVRKAATASQSAKKQTTSKTQTAKAEKDNTAKTETKS"
     gene            complement(28466..29803)
                     /gene="rimO"
                     /locus_tag="PXF40_000899"
     CDS             complement(28466..29803)
                     /gene="rimO"
                     /locus_tag="PXF40_000899"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HDL5802262.1"
                     /translation="MSASPNIGFISLGCPKNLVDSERILTELRADGYNIIPSYENADL
                     VIVNTCGFIDSAVQESLESIGEALEANGKVIVTGCLGAKENQIREVHPKVLEITGPHS
                     YEAVMNHVHKYVPKPEFNPYTSLVPKQGIKLTPKHYAYLKISEGCDHRCTFCIIPSMR
                     GDLASRSIVQVLDEAKRLVDAGVKELLIVSQDTSAYSLDRKKEEATKTVFWNGMPIKS
                     NLITLCEQLGSMGVWVRLHYVYPYPHVDDLIPLMAAGKILPYLDIPLQHASPKILKAM
                     KRPGSIERTLERIKKWREICPELTLRSTFIVGFPGETEEDFQLLLDFLKEAQLDRVGC
                     FKFSPVEGAVATDMPDQVPEEVKEERFHRFMQLQQEISAARLQAKIGKTVQVIIDDID
                     EEGIIGRSMADAPEIDGVVYVDNPSNQLVTVGQIISVTITHADEYDLWGILNN"
     gene            complement(29958..30650)
                     /gene="mtnN"
                     /locus_tag="PXF40_000900"
     CDS             complement(29958..30650)
                     /gene="mtnN"
                     /locus_tag="PXF40_000900"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HDL5802263.1"
                     /translation="MKIGIIGAMAQEIEILRQVMVEPKVTELAGCKIFEGKINNTRVA
                     LLQSGIGKVAAAIGTTLLIQLTQPDMIINTGSAGGLDPDLNVGDILISTEVRYHDVDV
                     TAFGYEIGQLPANPPTFSPNEQLVELAQKEAKKAGYNVVSGLICSGDAFINGNDKINQ
                     IRQNFPNVVAVEMEAAAIAQVCHGFNLPFVIVRAVSDVADKESHLSFEEFLPLAAEKS
                     STIVLAMLNNID"
     gene            complement(30708..30929)
                     /locus_tag="PXF40_000901"
     CDS             complement(30708..30929)
                     /locus_tag="PXF40_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HDL5802264.1"
                     /translation="MDNNYTLSAKITELETKVAFQELIIEELNQALIEQQFAIDKLQT
                     QIRHIAEKLKGAQLSQVASQAEETPPPHY"
BASE COUNT         9166 a         6141 c         6744 g         8892 t
ORIGIN      
        1 ttcttattat aatgttgaag cataaagtta aagttttaat actttttgtg ggtattaaga
       61 atttatttta atcgatgaca atatttaaga ggatcatcaa aatgaaaaaa acattagttg
      121 cattagcagt attatcagca gctgcagtag ctcaagcagc tccacaagct aacactttct
      181 acgcaggtgc taaagctggt tgggcatcat tccacgacgg tttaactcaa tttgacaaca
      241 catatgatta tggatccggt attaacctcg gtattaacct cggtattaac cgtaactctg
      301 taacttacgg tgtattcggt ggttaccaaa tcttaaacca aaacaacttt ggtttagcga
      361 cagaattagg ttatgactac tttggtcgtg ttcgtggtaa cactacattt tctggtgatg
      421 ataaagaaaa aactgcggct aaacattcag ctcacggtgc gcacttaagc ttaaaaccaa
      481 gctacgaagt tgttcctaac ttagatgttt acggtaaagt aggtgttgca ttagttcgca
      541 acgattacta cgtacaacaa catgtagata aagattcacg cattaaagtt cacaacttaa
      601 aaccatctct attattaggt gctggtcttg agtatgcaat tactcctgaa ttagctgctc
      661 gtgttgaata tcaatactta aatcgtgttg gtaacttaga taaggcagtt cgtacaacag
      721 ttggttatct aataccaaga ggtacaaatt tccaatacag cccagatatc cactcagtat
      781 ctgcaggttt atcataccgt ttcggtcaag gtgcagcacc agttgaagca ccagaagttg
      841 taactaaaaa cttcgcattc agctctgatg ttttatttga tttcggtaaa tcaagcttaa
      901 aaccagcagc agcaacttct ttagatgcag cacacgctga aatcagcaac ttaggcttag
      961 caaacctagc tatccaagtt aatggttaca cagaccgcat cggtaaagaa gcatctaact
     1021 taaaactttc acaacgtcgt gctgaaacag tagctaatta catcgtttct aaaggtacta
     1081 acccagctaa tgtaacagct gtaggttacg gtgaagcaaa cccagtaact ggtcacacat
     1141 gtgatgcagt taaaggtcgt aaagcattaa tcgcttgctt agcaccagat cgtcgtgttg
     1201 aaatccaagt tcaaggttca aaagaagtaa ctatgtaata tagttattca gttgaaaaat
     1261 tgaatcaaaa aaagcccgct tgttagtggg cttttttctt tttttatttc agtaaatctt
     1321 ttaaacttga tttcatttta gcaacttgct ctaagtaaag ttgtttattt tcgagttcat
     1381 cggttaattt gacaatagct tcagaaagcg ttagtttttg gcttttggca tatttagaga
     1441 gccttaacca gctcgaatac tctaaatcaa tggatttttt cttggttgtt tgcttttcag
     1501 cattaaagaa gcgtttgcgt ttggcgcgta ctgattgacg cattttctta cgttgctcag
     1561 gcgtcatttc cgacttaatc catttttcca cttcgtccgg agagttttgc aaagtagaga
     1621 ggaactgaac ttttaaatcg atcaagcttt gttcttcgta cttagtaata ttttctcctt
     1681 cacgatgttt ttttaggaga tattgccatt tccaagttgt ttcttgggtg atgagtttct
     1741 gatatcgcat aatctgaata tgataggaaa aagtaagcta tatttagcaa gtatagcgga
     1801 attttgtata ataaaccaaa ttttcaataa tgaggcagat ttgtgaccct ttctttactt
     1861 agtagccaaa aattagtaat gcaaaatgat ttctctcgtt tagatgagaa attgaatttt
     1921 ttagattttc aacctcaagc aaaacaagcg ttaaatcaat ttttacaatc tcagtttggt
     1981 gctttattag tcttaaaatc tgagcttttt ccggaattta tcaatgaaat cacggaatat
     2041 ctgaaaaaat atagtgtaga tctgccgatt attagcaaaa tggatttcaa taaaaatagt
     2101 ctatttggtt attctgtgtt tttggaaaga gagctgaaaa cagaatatgt taaaggtgca
     2161 attcacgagg cagataaggg aattttaatt gttaatatcc gttcgctctt attggatatt
     2221 acccaatggg ataagctaaa acaggcatta ttatttggtg aatatgagcc aaattctgtt
     2281 aatcactcac cctatttatc ggctaaagag aaatcaacat ttaaattgat tttagtaggg
     2341 gaaagagaag atatttctac tttatctgct tatgatgatg ggttgtacca atttgggcaa
     2401 tataccgaaa taaaatccta cttatcatta tcggataatg tggagcagtg gggaggttat
     2461 gttcagaatt atgctgagaa tctcatcaat aagcgattaa cttccacagc gcttaatcaa
     2521 tttttacagg cctatatacg tgaaagtgaa agccgagagt tggtgtctat ttcccctaca
     2581 ttattgagaa aacatttatt aggaattcaa aatttttacc caaatgtgac cgaaattgac
     2641 gaggtaaaag gttattttga ttatttagaa cagcaatcat cgatattaaa tcaatatacg
     2701 gtgggtgata ttctgactaa tcaactttat attgaaaccg aaggagagga aattgggcag
     2761 atcaatggct tatcggtcat tgagtttgaa ggcattccgc atagttttgg cgagccctta
     2821 cgcatgagtt gtaatgtaca atatggtgat ggcgaaatta cagatattga gcgtaaagtg
     2881 gagctagggg gaaatatcca ctccaaaggt attattatcg ctcaatcttg tttagcgaat
     2941 ctgttagaac taccaaccca gttaccgttt tcagcttcga ttgcttttga acaatcctat
     3001 ggtgaaattg atggggatag ttcttctctt gcgattttca atgtactagt gagtgcctta
     3061 gctaaagttg gcttgccaca atctattgcg gtgacaggtg ctatcgatca atttgggaat
     3121 gtgctaagcg tgggcggggt aaatcagaaa attgaaggct tctttaatat ttgtcacgct
     3181 cgccaattaa cggggaaaca aggtgtgatt attccggcgg cctgtgttag ccatttgagt
     3241 ttaagttcag aagttgttga ggcagtggag caaggtctat ttaaaatttg gacggtggaa
     3301 aatgtgtttg atgccatagc gattctgttt gagcgggatt tttatgatga tgagaaagcc
     3361 cctaactcag cccaaacagc attatttacc ttgattcacc agaatctaga tgagcgggaa
     3421 agtgaagaaa caagcggttc atttttaagc aaaatttgca aaaagataaa gctagactga
     3481 tccgacaagt cagcttacaa ctgttcactg aattaaaagt ctgttactat cagcctgatt
     3541 tatcagttat tgatataaca ggcttttttc actttacagg attttaaaaa taatgaacag
     3601 ttgtacacca attatcaaac caagctatac ttacgaagag cttttgctat caggaaaagg
     3661 agaattattc ggtgaaaaag ggcctcaatt gccggctcca ccgatgttaa tgatggatcg
     3721 catcattgaa atgaaccaag aaaaaggcaa ttttgaaaaa gggtatattg aagctgagtt
     3781 tgatattaaa ccggatttat ggttttttaa ctgccatttt attaacgatc ctgtaatgcc
     3841 gggttgctta ggcttagatg cgatgtggca actggttggt ttttatctcg gctggattgg
     3901 tggcgaaggc aaagggcgtg cattgggcgt aggtgaagta aaattcaccg gacaaatttt
     3961 accgacagcg aaaaaagtta cttaccgtat ccatatgaaa cgtgtggtca atcgtaagtt
     4021 agtgatgggg gttgctgatg gtgaagtcga agtggacggg cgagtgatct atactgctac
     4081 tgatttaaaa gtaggcttat tccaagatac gacagcattc taatccttat aaccttataa
     4141 caaaaagagc tacatttcgt agctctttct gcttttttaa caacgtttga ttagcgattc
     4201 aaccacgcca tatattccgc tgttccttca gcaacggttt taaatgtgcc tgtgtagcca
     4261 gcggctctta ggttggttaa gtccgcttga gtgaacgttt ggtagcggga ttttaaatga
     4321 tccgggaatg ggatggtttc aatttcgcct ttgccgtggt atttgataac cgcattcgca
     4381 acttcttgga aagattccgc ttttccggtg ccgaggttga aaatgccaga aatgctgttt
     4441 tgccacgccc aaagattcac ttttgccaca tcttccacat aaacaaaatc acgcaagaac
     4501 tgctctgagc cggcaaatag ttttggattt tcccctttta acatctggtt gtttaagtgg
     4561 aatgccacgc ttgccattga acctttgtgt tgctcacgag gcccgtatac gttgaaatat
     4621 ttgaaaccac agaccggtga ttctgcctca ggcaaaatac ggcggacata ttcatcaaac
     4681 aggaatttgg agtagccata agcatttaat ggaccttcaa actcccgttt ctcgataaaa
     4741 ttatccgaac gtccgccata ggttgccgca cttgaggcat agaagaaagg aatttggcga
     4801 tctaagcaaa aatgcaataa ctcttttgaa tattcgtagt tattttgcat taagtatttg
     4861 ccgtcccatt cggtggttgc cgagcaagcc ccttgatgga aaaccgcatc aatctcacca
     4921 aaatcatcgc cggcgataat agaggcgatg aaatcctctt tatcgcaata atccgcaata
     4981 tctaagtcca ctaagttgat aaatttttcc ccgtttttga ggttatctac tactaaaata
     5041 tctttgcgac cgatttcatt taaggcttta acaatgttac tgccaatcat acctgcgccg
     5101 ccggtgacga taatcatatt tttatccttt ctaaagttga actgtggtta ttatcgtgtc
     5161 atcacactta atttgcaaat ttttaagcca ttttaaccgc ttgtgcctgg ttatttcgct
     5221 cgtgcaattt gctttttcaa tttttgcatt ttttctttga tgcgttggcg ttttaaattg
     5281 gatatgtggt caacaaaaag cacgccgttt aaatggtcga tttcgtgttg aatacaaatc
     5341 gcaaataaat catcggcatc gatgataatt tcttcgcctt ggcggttaag ggctttgact
     5401 ttcactttct ctttgcgtgg cactaaggca cgatgcccgg gaatggagag acagccctct
     5461 tcaatgccgg tttcaccgct gctttctaaa atttcagggt taattaacac cacttgattg
     5521 gttttgtcgc cctcaatatc aatagtaata acacgcttaa gtacgcccac ttgcggtgca
     5581 gctaagccaa taccttcgtg ttcgtacatt gtctcaaaca tatcatcgat aaaacgattc
     5641 agtgcttcgt ccacctgttc caccggttca caaacggttg ccagtttctc atcggggtaa
     5701 agcacaacat ctaatattgc catttttgtg atctctctcg aaaagtttaa aaaattcgtt
     5761 tggctatttt aaaccttttc ttattattag ggaaattttg aggatgaaaa tatggcatat
     5821 cactacgatt tattacgatt attacaagtg ccgcaaatgg gggctcaacg tatagggcga
     5881 ttattggcgg aactcaattt tgctgaattt tgccactatg acaaacttca actcaaacaa
     5941 ataggttgga atgaaaagca aattcaacgt tggtttaatc ctgatcaaaa gtggattgat
     6001 caggcgatga cttggtcaga attgccaaat cagcaaattg tgacactctt tgatgaaaat
     6061 tatccgtttc tcttaaaaca aatttcgact gcgccaccgt taatttatgt aaagggaaat
     6121 gtggaaagcc tttctctgcc acaaattgcg attgttggca gccgagacta ttctcattat
     6181 ggtgaatatt gggctgggca atttgctgcc gaattagctc gccataatat tatcattacc
     6241 agcggtttag ccattggtat tgacggtttt gcccatcaaa aaatcgttat ggaacaaggc
     6301 ataacgattg ccgtgttagg gagtggatta aatcaagtct atcctgctcg ccataaaaaa
     6361 ttagccgaac aaattgttga tttaggtggt gcattggtgt cggagttctc gcctaatcag
     6421 ccgccggtgg cagaaaattt tcctcgtcgt aatcgaatta ttagtggctt atcgctcggc
     6481 actttagtta ttgaagcaac gcttaatagt ggttcactga ttaccgctcg ttatgccctt
     6541 gaacaaggta gggaagtgtt tgcgttaccg aatgcggtac aaaaccctta cgcacaaggt
     6601 tgccacaagc taattaaaga aggggcattg ctcgtggaag gtgtggaaga tattttagag
     6661 gtggtcgcct cgcaatatca acctcagcaa atccctttgt ttgatgagtc taagccaaca
     6721 gtaagcacat ctttacaagc ggtcaaaaac agcgaaaaat tcgcaaaaaa tctgccaagt
     6781 ctgaccgctt gccagcagca aatttatcag catatcagct tagagccgat ggcaattgat
     6841 gatttagcca aagttacgga gttgacgatt gaaatattgc tggttgaatt actgggtctg
     6901 gaattagccg gtgtgattaa acaagtgagt ggggggtatg tgatggataa tgggtattga
     6961 acaagagcgt tgtcgtttaa ctaaacaaaa ttccctacca tcaagaaatg gcagggaaga
     7021 ttcctcgcag gcagcaaata acacctgatt ttaattaggt attcagtttt gccggttttt
     7081 tcgccaaata attataggct accaacagag cgaataagcc gacaataatg agcgtaatga
     7141 tattcttgtc gaagtattga gccatatagc ctaacacaat cccaataccg ccgaagtctg
     7201 agtcagagaa agtggtgtta gcaaagccta atgaacccag tacaggtaat aagaatacag
     7261 gcaagaaggt aattaatatg ccgtgaataa aagcaccgat aattgcacca cgacgcccgc
     7321 cggtggcgtt cccaaatacg ccggcagttg ccccacagaa gaagtgtggc actacgcccg
     7381 gtaaaattaa cacccaatta agttgcccta gaatggctaa gcttaaaatc ccacctaaga
     7441 aactggcaag aaatccaact aataccgcat tgggggcgta agggaaaaca atcgggcagt
     7501 cgagagccgg tttggcatca ggtactaatt tttcggagaa gccggtaaat gccgggacga
     7561 tctcggctaa aattaaacga accccttgca aaatgacata aacaccggct gcaaaagtga
     7621 tggcttgaat ggtggcatac actaaataat gttgtccgcc gcttaatgta gaaacgtatt
     7681 cactgcccga agcaagggcg agaatatagt aaatcgccat catcgtgagt gaaatagaaa
     7741 tggagctatc acgtaagaag ccgaggtttt taggtaaatc catttcttcg gtagatttag
     7801 agccttttcc taccagttgc ccgattgaac cagcaagcac gtagcccaat gtgccgaaat
     7861 gacctaaggc aacatcattg ctagcggtca cttttttcat atagaagtga gcgatagtcg
     7921 ggaaacataa ttaaccctaa ggttaatgcc ccgacaaaga cgagctgaat accttcaaag
     7981 ccggcaacgg ttaggattac gccgatcata cacgccatat agaaggtatg gtgtccggtt
     8041 aagaaaatga attttaggcg ggtaaaacgt gcaattaaaa tattggctac cataccgaat
     8101 gccataatta acgcagtcgc cgtaccatat ttttcgattg ccatagacac aatcgcttcg
     8161 ttattaggga taatgccttg cacgttgaag gcgtgttcaa acataccgcc taaaggagtc
     8221 agggagctta aaagtactgt tgcaccaccg cttaacacta agaagcctaa aatagttttg
     8281 attgttcctt taacaatatc ggataccgat tttttctgtg caactaaacc gaccagagca
     8341 attaaaccca ctagaacgga aggcactttg agaatatcta atataaaaaa gagtagcgat
     8401 tccatataac atctccgtta ttggttaaag taagcggtca atttttcttc gaattctgct
     8461 aatccaacaa tgttttttac cacgatgagt ttttctttcg gcacattgct gcttgcggca
     8521 atatcttttg ccatcacaaa taaatcagca tcatcagcaa caacagagga aaggtcggta
     8581 tgactcactt ccgcttcgac accgagtttt gccaatactt ttttaatgtt catttccatc
     8641 ataaagctgc tacctaagcc ggaaccacat actgccataa ttttcatagt aaatctccat
     8701 taaaggtgaa tgaatagttg tctgaatttt gaactataga aatactatag aatagaaatg
     8761 ttaacgctat caaacagaaa atattaaaaa tgtgatagcg ttaacatttt tagtatttaa
     8821 ttagataaaa aataatcagt tggcattttg ctctgttctt tctaaatagg aaaattaagg
     8881 atttagccct ataatatgga acaattagga aaatagtatg gcaaatggaa caagtagaaa
     8941 tcgaagatct tcgggcagag tcactttagc tgatgtagcc aaagttgttg gtgttgggca
     9001 gatgacggta tctcgtgctt tgcgtacacc agaaatggtg tcggagccac tacgtaaacg
     9061 gattgaagag gcaatcattg aactaggata tattccgcat ttttctgctc ggcaattagc
     9121 ttctgcagaa tcacataatt tggtcattgt gacgacgtcg attagctcaa cggaaaatac
     9181 cttaatttta tcggcattac gcaaaagcgt ggcggattcc gcattgcaaa tggtgatttt
     9241 gatcgctgat caagaatctt ggtttcaaga actgattaat catgctcctc aagcgatagt
     9301 gtttttgaat ttagattgcc ctcctaatgt ccgtgagtgg attaaaaaca gcaatatccc
     9361 taccgtagaa ataggtgcga taaaaaaaga accgattcat ctcagtgttg gaattgatag
     9421 ccacgaagca atggagaaaa tgatccattt tttggtgaaa aaaggctatc gagagattgg
     9481 attgttatcg gcgaagcaag atttatccat cttcaaacaa tatttagaaa gttggcatac
     9541 gactttattt gcacatcata tttctccttt aaaaatccac cacgtagtag aggatatttc
     9601 gttttcggca ggagcaactt tgttgactga agcccttcta aattgggaag caatagatgc
     9661 attggttttt ttatccgatg aattggcttg cggagcatta tatgaagcat tacgccgaca
     9721 tatgagcatt ccaaaagatc ttgcgattgc cggtttaggt ggtttagaag tggggagtat
     9781 ttcctaccct aaattgacaa ccattgcgat cccttacgag caaatgggaa aaatagcagg
     9841 taaacaacta cttactcttt tgagtggtaa aaccttatca gcagaagaga tgattgttaa
     9901 attaccgaat aagctagtga ttcgtgatag cgccgcataa tattgatttt gcataaaaat
     9961 ctataaaaga tcgtggcaag tcttgtagaa aatgatagaa tttaacgctt taaaataatt
    10021 tctgattttt ttattcattt tttaggttat atatggctac tgagattaaa acaaaaaccc
    10081 ccgagcaagt cgaacaaaaa ggggggaaaa gcaaaggtgc aaatacagca ttatggctgg
    10141 ttgcgattgt atttttagca gttgctgcgg taggtaatgc ctatttttca tctcattttt
    10201 cattaattgt tcgagtgctt ttattggtgg tgttgctagt tggtgctgtt gcactagcgg
    10261 caattacaaa tcaggggcaa aaggcaattc attttattaa agagtctcga accgaactac
    10321 gcaaaattat ctggccgaca cgccctgaag caacacaaac caccttgatt gtattggcaa
    10381 tgtgcgtagt agtttccttg gttttatggg gtattgactc aatcatcgtc gcattaatta
    10441 catttgtaac aagtttaagg ttctaaaatg agtgaagtag aagtgaaaga aaatggctca
    10501 aaacgctggt atgtattaca agcgttttca ggctttgaaa accgtgtggc agtaacattg
    10561 cgtgaataca ttaagcttca caaaatggaa gagcagtttg gtgaagtatt agtgccaacc
    10621 gaagaagtcg ttgaaaatgt gggcggtaaa cgccgtaaaa ccgagcgtaa attcttccca
    10681 ggttatgtat tggttgaaat ggaaatgaat gacgatactt ggcatttagt gaaaagtgtg
    10741 cctcgtgtaa tgggctttat tggtggtacg gcagatcgcc ccgcaccaat taccaaacgt
    10801 gaagcagacc gcattctaaa ccgtgtacaa gaaacagcgg aaaaaccacg ccacagaaaa
    10861 gaattccaac cgggcgaaag cattttggtt acagaaggtc cgtttgcaga tttctccggt
    10921 acggtcgaag aagtggatta cgaaaaaggt cgcttaaaag tatcggtgtc gatttttggt
    10981 cgtgcgacac cggtagaatt agaattcagt caagtggaaa agcagagcta atttcaatta
    11041 atttcacaca caagcggtta tttttctcaa ttttttgcaa aattcagcgg aaaaaagacc
    11101 gcttgtaaca agatttattc aacaaagcga aagttttgct tgaaaaatag tcgcaaattc
    11161 tttaaaattt gcgacctatt acgagccagc ctgctgactc gtatttttta tgtaacaggg
    11221 gagctgattt tcagcgttat cacccattta gaggaaaatt aaaatggcaa aaaaagtcca
    11281 agcctacgtt aaactgcaag ttgcagcggg tatggctaac ccatcaccac cggttggtcc
    11341 tgcattaggt caacaaggtg ttaacattat ggaattctgt aaagcattca acgctcgtac
    11401 tgagagctta gagaaaggtt taccgattcc ggttgttatc acagtttacg ctgataaatc
    11461 tttcacattc gttaccaaaa ctccaccggc ggcagtgcta ctgaaaaaag cggtaggtat
    11521 caaatctggt tctggtaaac cgaacaaaga taaagtgggt acagtaactc aagagcaaat
    11581 ccgtcaaatc gctgaaacta aagcagcaga tatgactggt gcgactatcg aaaccaaaat
    11641 gaaatcaatc gctggtacag ctcgctcaat gggcttaatc gtagaggaat aatacaatgg
    11701 ctaaattgac taaaaaaatg aaagcaatta aagctggcgt agattctact aaagcttatg
    11761 acatcaacga agcagttgaa gtgttaaaaa aattcgcaac cgctaaattc gttgagagcg
    11821 tggacgttgc tgtaaactta ggtatcgatt ctcgtaaatc agaccaaaac gtgcgtggtg
    11881 caaccgtatt accacacggt acaggccgta ccgctcgtgt tgctgtgttt acacaaggtg
    11941 caaacgcaga agcagcaaaa gcagcgggtg ctgacttagt gggtatggaa gatcttgcag
    12001 agcaaatcaa gaaaggcgaa atgaactttg atgttgttat cgcttctcca gatgcaatgc
    12061 gtgttgtagg tcaattaggt caagtattag gtccacgcgg cttaatgcca aacccgaaag
    12121 taggtacagt aacaccaaac gttgcagaag cggttaaaaa tgcgaaatct ggtcagatcc
    12181 gctaccgtaa cgacaaaaac ggtattatcc acactactat cggtaaagca gacttctcag
    12241 ctgaacaatt aaaagataac ttaaacgcat tgttagctgc tttaacaaaa gcaaaaccaa
    12301 caacagcaaa aggtatcttc atcaagaaag taagcatctc tactacaatg ggtgctggtg
    12361 ttgcggttga tcaagcatca ctttaatttt taatagaatc aaaagaccgt agtgttaata
    12421 ctctacggtc tttttcttta ggtacgaatg ttaagattat tatctttttg ctttattttt
    12481 ttgcttagtg cttgtactgt attacctcaa attaagcaat taccgccaca ggttgaatct
    12541 gtaaaatcct ttaaagttga aaataatggc cagcaaagtt tgcttctaat tcaattttat
    12601 gaaaataaat ggcgttggat tcaaactgat cctttaggtg ctcctattgc cagagtatgg
    12661 cttactaaaa aaggttggga gccagatggc tttgtaatgc caaataagca ggcacagcta
    12721 ttatttacag ctttagtcaa tgcattaaac cctcattctc caccttttta tttagataaa
    12781 ggttggaaaa ttgagaggga aaaatcccaa tttacgattt ggctaccaga tagcagtaaa
    12841 tggaaagtgg aaatattggg ggaataagcg aaaacttgaa cctctatgct tgaatcactt
    12901 gaatatgaat tttataattt tagtgccatt acacaataat actggaataa ataataatga
    12961 cactatattt atcagagccc gccatcacca gtccgattgg atatggcatc gtggagcatt
    13021 tgaatgtttt aattaatgcg aaagtatctc ctttagatac gacttcacag ccttatttac
    13081 gacataatat ttcaaatagt tcaccgaaat ttctagggca agtctctgct agattgcgtg
    13141 attttcctgt tgaactatct attgaacacc gcagccgcaa taaccaactg ctatggcacg
    13201 cccttgcaga aattgagccg aaaattaccg cttgtatcga gcaattcggg cgtgagcgga
    13261 ttgcggtgat catcggcacg tccactaccg gcgccgatga aaatattccc gtcttcaaag
    13321 ccggtgtgca gggcgattat gccaccgagc agtttaatca acagcaaatt ctcttctctg
    13381 cgccgtctga tttcgttgcc gaagtgtatg gcttaacggg gctgagttac ggcatttcca
    13441 ccgcctgcac ctcagaggca agagcgttaa tttctgctgc ccgtttactg aaagccggct
    13501 tgtgcgatgc ggtgatttgc ggtggtgtgg ataccctttc gcctttaact atcagcggat
    13561 ttagctcgct ggaagtgtta tcaaaccaac aaaccaaccc attttccgct aaccgtaacg
    13621 gcattaacat cggcgaaggc gcagcggtgt ttgtgatgag ccgtgaacca ctggacgaac
    13681 atcgcattca gttactgggt tatggttcca gctcggacgc ttaccatatg tcctcacctc
    13741 accccgaagg ggaaggggca atttccgctt tccaaaatgc cctgcacaat gctgatttag
    13801 acgcagccga catcggctgg atcaacctgc acggcacagg gacgcttcat aacgatcaaa
    13861 tggaaagcct cgctgtggca aaaatcttcg gtaatcagac cgcttgcacc accaccaaac
    13921 cctacaccgg gcataccctt gggctgccgg tgcggtggaa gcggcaattt tgtggggaat
    13981 gctctgtcgc caacacaacc cgaccggcaa gctccctgcg caattatggg ataaacaagc
    14041 ggacgaaaac ctgccgaaca ttgcgatcac cgatgaacag agccgttggg cagcaggcag
    14101 acggattggc gcaagcagct cttttgcctt tggcggcaat aacagcgtac tgattttggg
    14161 agaaagcgat gcataaattc accttcccta tcgaacaaat tgcaccattg gttcctcaca
    14221 gtggcaatat gatcctactc gaccgcatta ccgcattcgg cgaggatttt ttgaccgctg
    14281 aaaccaatat tcgccctgac aatccgctga tcaaacacgg aaaacttgcc acctacgcca
    14341 gcattgaaat tatggcacaa gccggcgaac cagttcgctt aggctacctg ctcggcactc
    14401 gcaaactgca cctccaccgc caagaaatcc cgattggctc acagctacaa attcagatca
    14461 aaatgtctat tcaagatgcc accggcttcg gcgtattcga ctgccaactg atcgatttag
    14521 ccgacaacca agtgctttta gaaggggcgc tgaatgtgtt tagtccgaaa tagagttggt
    14581 agtagtaagt agtagtaagt agtagtaagt agtagtaagt agtagttggt agtagttggt
    14641 agtagttggt agtagttggt aggaaattcg ttatgcaaga ggcctatgac attcaacatc
    14701 tttgtactcg caaagaagat aaatcctttg atcgcaaaag tgcgagaaaa gaaccgaaag
    14761 agattttgcg gcatttgatt ggttttgcga atgcagacgg cggtttatta gttattggta
    14821 ttgaagataa tggcgaaatt accggtttta actaccaaaa agcccatcag ccggaagaat
    14881 ttatccacgc tctgcacaat ttacaaaaaa tgccgatacc ggtgacctat cagcaaattg
    14941 aggtggtaaa tagtcgaggt ttagcggatt ttgtcttatt atttgaagtt acagcttcga
    15001 gtgggagggt gattacctct cacgatgatc gggtttttct acgctcaaaa gatcaaactt
    15061 tggaactcaa ttttgaacaa cgtttgcaat tagagtacga aaaagggcag cgtgcttttg
    15121 aagagcaacc gatagcacgc gctgatttta ctgatctgga tatggattta ttagaacagt
    15181 atcgacagaa attacacaca gatcgctcaa tagaagagat tctgaaagcc cgagatttaa
    15241 ttaacaaaga agggcaaatt acgaatgcct gtattttgct atttgggaat aacccgacac
    15301 gttattttcc taatgcccgt ttgcgttttt tgcggtatga aggtaaagca cctctgaccg
    15361 gtagaacttt taatgtcgtc aaagaattta tgcttgaaga gcctattcct aagttattgg
    15421 agagtgctaa ggcagtatta aaaagccaat tacgagagtt ccaacgttta gatgaaaacg
    15481 ggcaattcac aaaaattgat gagtatccag aatttgcttg gttagaaggt attgtcaatg
    15541 cgattgcaca ccgtagttac agtaatcaag gggactgcat tcgcatttcg atgtttgatg
    15601 accgtttgga aatttttagt ccgggtggat tacctcgccc tgtgacgctt gaaaatatgt
    15661 actatacccg tttttcacgc aatccgaaga ttgcacgagt gctgtatgaa tttggttggg
    15721 tcaaagagct gaatgaaggt gttaatcgta tggcggagga aatgaacgct taccaactta
    15781 atacaccttc ttactttgaa cccaatgaaa atgcggtcag actgatttta gaaaataata
    15841 ttgaacatcg gacattaagg gcattagaac gaatagaaga aatttttacg caggatatta
    15901 tggcgacatt aaataaaaat gaagttacta tcctgcaata tttatatgaa aatgaaatga
    15961 ttactgtaaa gattgctagt gagatattag atcggagtaa agaattatct cgtagaatat
    16021 taaaaagttt agaacaaaaa aatattctca cttggcacgg cttaagtcca aaagatccaa
    16081 cccaatacta cacactcaag aaatagtagg aaatataaga tgaataatac agttctcatc
    16141 accggctcaa gccgtggtat cggtaaagcg attgctttaa cccttgcaca acaagggttt
    16201 gatattgtgg tacattgccg ttctcgtgtg gaagaagcgg aagcggtggc acaagcggtc
    16261 agaaatctcg gaaaaaatgc cagagtgtta cagtttgatg tggcggatcg tgaaaaagtg
    16321 cggtcgattt tagaggcaga tgtggaacaa catggtgcct attacggcgt ggtgctaaat
    16381 gcagggctta cccgtgataa cgcctttcct gctttaaccg atgaggattg ggatagcgtg
    16441 ttgcgtacca atttagacgg tttttataat gtcctgcacc cgattatgat gccgatgatc
    16501 cgtcgccgta aagcaggcag gattgtctgt atcacctcgg tttccggctt gatcggcaac
    16561 cgtgggcagg tcaattacag cgcttcaaaa gccggcatta ttggtgcggc aaaagcactc
    16621 gccatcgagc ttgccaaacg taaaatcacg gtaaactgcg tggcgcccgg cttgattgat
    16681 accgatattc tggacgaaaa cgtcccaatc gaagaaattc tcaaaatgat ccccgcagga
    16741 cgaatgggcg atcctgatga agtggcacac gccgttgcgt ttttaatgga tgaaaaagcc
    16801 acttacatca cacgccaagt catcgctgtg aatggtgggt tgtgttaact ttaggataat
    16861 aattcgtagg ggcggatcca gtacccgccc gaagccaaaa agagataaat atgaaacgag
    16921 tcgtcatcac cggaattggt gtggttaccg cttttggtaa agagtgggcg gaaattcacg
    16981 gctatcaacc gccgaaacat tggaaccgca agcagttgcg cagccttggg cgagtgtcgc
    17041 aatttgtggt ggaggccagc gagcgggctt tagcacaggc cggtttgttg gacgaaaacg
    17101 gcgtgatttt cgactggcta aaagacaggc gaatgggcgt ggcgtgtggc tcgtccacag
    17161 gctctaccaa tgacatcaaa gatgccgccg aattgctgat gaccggcaaa tcggacggtt
    17221 tcaatgccaa cacctatgtg cgaatgatgc cccacaccac cgctgccaat attggcattt
    17281 tcttcgggct gacagggcgg attatcccga cttccagcgc ttgctcctcg ggcagccaag
    17341 gtatcggtta cgcttacgaa gccattaaat acggtatgat cccgatgatg cttgccggcg
    17401 gtggagaaga attttgtgcc tccaaagtct atgtcttcga cagcctctat gctgccagcc
    17461 gccgcaacga caacccaaaa ggcacgccac gcccctatga caaagaccga gacggcttag
    17521 tgatcggcga gggagcggga atgttcgtat tggaagagct ggaacacgcg ttagcacgag
    17581 gggcaaacat tatcgccgaa gtggtgggct acggtgcaaa cagtgacggt tcccacgtca
    17641 cccgcccaca agccaccaca atgcaacgct gtatggaact tgcccttaaa gatgccggta
    17701 ttcaaccgaa ccaagtcggc tatgtaaacg gacacggcac ggccaccgag cagggcgaca
    17761 ttgccgaaac tcaagccacc acagcggtgt tcggcaaaat tccgctcagc tcgcaaaaaa
    17821 gctacttagg gcatacgctc ggtgcgtgtg gtgcattgga aagctggttc agcattgaaa
    17881 tgatgcgaga cggctggttc gccccaacac tgaatttaga aaatgtcgat gaacgctgtg
    17941 gcgacttgga ttaccttcaa ggtgacggac gggaaatcca caccgattat gtgatgaaca
    18001 acaatttcgc cttcggcggt gtgaatacct cattgatttt taaacgttgg aaataaccgt
    18061 tttcaaataa tgaaaaagat attattagtt tattactccc aaaccgggca actcacccat
    18121 ttggcagaaa attttgtaca atcgcttgaa caagcgggcg tttttgtgga aaaactcgca
    18181 atcaaaccgc aacaggaata cccgtttccg tggcggttta tgcgtttttt taacaccttc
    18241 cccgaaaccg tccacctcac accgccgccg attgagcctc tgccctttca gcacgaaata
    18301 tacgatttgg tgatcatcgc ctattccgtg tggtttctct cccccagcca gccgattacc
    18361 gcttttttac agagtgaaca ggcaaaaaag tgttgaagga tacgcccgtc atcacgctga
    18421 tcggctgtcg caatatgtgg ctgatggcgc aggaaaaagt gaaaaaactg cttgccgaga
    18481 gtgaggcgaa gctcattggc aacgtggtca aagtggatca atctaacgac tgggcgagtt
    18541 ttatcaccac accgctttgg atgctgaccg gcaagaaaaa aaatcggcaa gctgccgagc
    18601 gctggcattg ccgaaagcga aatggaagat gtaaaacgct tcggggcaaa acttttgcac
    18661 atttttagcc aaaaccaacc gcttgacagc acccttttcc gccaaatgca agcggtcaaa
    18721 attgacgaaa aattgatgat gagcgaaaaa gtcggtgcga gaagtttcca cctttggggc
    18781 aaattactga tcaagtgcgg tcaaatttca ccgcacttac gccaagcggt actctatttt
    18841 tacatcctct ttttagtgac gttaatttta accgtcgtcc cgatttcaac ggtgattaaa
    18901 cggctattac gcccactgct gaaagaaaaa ttagaaaaac aaaaacggta ttttgccgag
    18961 ccttcgggcg agtaaacgta ccctacacgg aaactttatg ctatctaacg tctatatcac
    19021 caacacctcc gcctttttac ccaacgcccc tgtgtccaac gatgcaatgg aagcggtgtt
    19081 gggaatggtg ggggaaacgc cttcccgagt gcggaagatg attttgcgtt ctaacggtat
    19141 tcaacatcgt tattatgcca ttgacccgat aacccgccaa gcgactcaca gcagtaccga
    19201 gttggcggtg caagcggtca aaaaattggg aaattctgca acatcagcga cttgcttggc
    19261 ggtggggaca tcttaccccg accaaattat gccggggcag ggggtgatgg tacacggctt
    19321 gcttgatgcc gaaccgatgg aagtgctgac cactgccggt gtgtgcgtgg cgggaatggc
    19381 agcgatgaag cacgcctata atgccgtacg catcggtgag catcgtgctg cgattgcaac
    19441 ggcttccgaa accgcctccg ccattatgcg cagtgaacat ttccgtgccg aaatcgatca
    19501 taaaaaactg gacgatgctc gccctgagat cggttttgag aaagatttcc tgcgttggat
    19561 gctctcagac ggtgcagggg cggtattgct tgccaatcag ccgaacgaaa aagggttgag
    19621 cctcaaaatt cactggatcg atctggtctc ttacgctaac gaaatgccgg tttgtatgta
    19681 cgccggtgcg gaatttattg acggcaacta caccggctgg aaagcaatga gcgaagccca
    19741 acgtgccgaa tgctcggcaa tggcggtgaa acaagatgtc aaactgctca acgaaaacat
    19801 cgtcaaatac acggtggaaa aagcattgga gcggattatc ccgaaataca agctcaacgc
    19861 tgaagagatt gactacttcc tgccgcacta ctcgtccggt tccttccgag ataaattatt
    19921 ggaaggttta cagcggatca atttcctgat cccacaggaa aaatggttca ccaacctgac
    19981 taccaaaggc aacactgggt cagcctcgat ctacattatg ctcgatgaat ttatccgcac
    20041 ccacgatctc aaacagggac aaaaaatcct ctgctatgtg ccggaaagcg gacgtttttc
    20101 gtcttgtttt atgcttttgg aagcggtggt aaattcgtaa aatcgtaggg acgggggcta
    20161 ttcccgtcca acaatcatcg gaaaacgtat ggacatcaat gacattcccc aagacaacag
    20221 caaaatcttc aacggcgaac gcaaagtgat ctacgcccgc aatccgcaac cagaaatccg
    20281 ccaaatgatc tcctctattc tcgcttgcta cgcttgggac gaaaacaacc cgtttgtagc
    20341 gaagtctgat gcacggttga aggcattggc ggaagttgtt ggtaaagcag aaattggcga
    20401 ttaagtttga ttttgtgctt tacagggtcg cagattatct gtataatttg cgaccttaac
    20461 ttgcgagagc aagctgatgg tgcttagcct atctaagccc cgtctaagac tgtaggggtg
    20521 aaaacttaat aatcctacat agatggtgaa cagacagaat tctctgcttc tggacacctt
    20581 aggctcaaag aagattgcag tttgtagcaa tgcaagcggt aatatttttg ggattttttg
    20641 taaattctgc ttgaaaaggc agagtgtatc aggagctaaa accaatggca ttaaatcttc
    20701 aagacaaaca agcgattgtt gctgaagtaa acgaagctgc caaaggtgca ctttcagctg
    20761 ttgttgcgga ttctcgcggt gtaacagttg aaaaaatgac tgagttacgt aaagcagctc
    20821 gtgaagctgg tgtgacaatg caagttgtac gtaatacttt attacgtcgt gcagtggaag
    20881 gcaccgagtt cgagtgctta acagatacgt ttaccggtcc aactcttatc gcattctcaa
    20941 atgaacaccc aggtgcagca gcacgtttat tcactgaatt tgcgaaaaca aacaaagagt
    21001 ttgaacttaa aggtgcagcc tttgaaggta aaaaacaaga tgttgcattc ttagcaacct
    21061 taccaactta cgaagaagca attgcacgtt taatgggcac aatgaaagaa gctgcggcag
    21121 gcaaacttgt tcgcactctt gcagcattac gcgatcaaat ggaagcagca gcttaatttt
    21181 aagcactctt ctttattcgt ttaacaactt attttacttt aggaatcgat tgttatgtca
    21241 ttaactaacg aacaaatcat tgaagcgatt gcttctaaat cagtatcaga aatcgttgaa
    21301 ttaatcactg cgatggaaga aaaattcggt gtttcagcag cggcagcagt agcagcagct
    21361 ccagcagcag gcgcagcggc agcagaagag aaaactgagt ttgatgtagt attagcagaa
    21421 gctggtgcaa acaaagttgc tgtaatcaaa gcagtacgtg gtgcaacagg tttaggctta
    21481 aaagaagcta aagacttagt agaatcagct ccagctgcat taaaagaagg catctctaaa
    21541 gcagaagctg aagcacttaa gaaagaatta gaagaagctg gcgcgaaagt agaaatcaaa
    21601 taatttttga tttattttgt cagaacttca agttcaacaa accccgatgg aaacatcggg
    21661 gttttgtttt ttcagaattg tgtaatgtag atatgattac ctttatccat tacttgcgca
    21721 gcagtgaaaa atgtaaaaat tccacaaagt gatctgccca gtgcatttcg tggtggattt
    21781 catttgccat aatccgcagg cggatattgt ctaacggcac gccaatccga atcagtgctt
    21841 ggtagtaatt gagcgaacaa tcaatatagg tttggttcgt attagagata aagtgcgaat
    21901 cgatttcatc gccttcgtta gtgccaacct gaataaacac tttggtattg ggttgtaacg
    21961 gatattggtg cgtaaaacgc agaaaatccg gctcactaaa ccaagaggca agcgaaaaca
    22021 cccctaaatg cccgaaaata tgtgggtagc ggctgcccat ataagcggtg ataatgccac
    22081 ccattgaact gcctgccaat aaggtatgtt cttgctgagg cttggtgcga tagtgaatat
    22141 caataaaggg tttaaccgtt tccaccaccc atttggcata ttcctcccct aagcctccgg
    22201 catttcgggt ttcaggggtt gagccggtgg ttgttttcca cgggccgtat tcatttaagc
    22261 gattagctcc tgcgttatca atgccgacaa taatcatctt cggtaattct tggtgtgatt
    22321 taatggttgg aataattttc caagaatgcc ccgaataaga ctctttgctg taaaacacat
    22381 tttgcccgtc gtgcatatat aacaccggat aacgttccca accttcgttg tgataatcct
    22441 tcggcaatag tacccgaatg cggcggtgat ggtgtaaata gggaacatat aaaaaatgct
    22501 cctgcatttc taaatagtgg ttaagtggtt tttgtaccat cagtctgtcc ttttgcttaa
    22561 attgtggcgt attttacacc ttaatcagtc tgagttaaaa caagcggtca gaaaaagtca
    22621 aaaatttgca aattgctgtt acctaacgca atcggttgcc ttatgctttt gaggaatata
    22681 aaagagaaac tgtgatctaa gtcacagcaa tttttattcg gtttgactaa aatccgaact
    22741 atcacttaat agagaggaaa atgttatgca ggcttcatta caagatattc ttgaggtagt
    22801 aaaagcaaaa aatctcactt atcagcaaaa attgatgagt ttaggcaata ttgctgagcg
    22861 gttatttaac ccgattgaac tacttggcta cactgaagaa gagtgggaac acattgaaaa
    22921 tcagatgatt tgcgatttaa atgaaggtta tgcgatttat cgcccacgtt atattttgcc
    22981 tgattataat gtgtatatgc aaaaaggttg ccaattctta gatttacctc cgccaaccaa
    23041 tttagatgaa gccttagacg gcttgttaat tctgtattca cacgttccgt ccattactac
    23101 ttttccggtg tatatcgggc gtttagacca actgttagaa ccgtttataa ccgatgaaga
    23161 gcaagattac attaaaatca agcgtttctt aaatcatatc gataaaacca tttccgattc
    23221 tttctgccac gctaacatcg ggccgaatga caccaaagcc ggtcgtttaa tcttaaaagc
    23281 ggtgattgag cttgaaaaca ttacaccgaa tatgacgatt cgttatgata aaaccaaaac
    23341 atcgcgtgaa tttgccgaac tggcggcgaa agcgtgcttg ttggtgtcca aaccgtcttt
    23401 tgctaatgat gcctactaca ttcaagattt aggcgaagaa tacggaattg caagctgtta
    23461 taacgcctta ccggaatgtg gcggtgctta cactctgacc cgcctgcgtt taggtactat
    23521 cgggcgtgct tgtgcgagtg ttgaacaaat ggtcaatgag atgctgccga aagtggcaaa
    23581 actcgccctt tccacgatgg ataaacggca taaattcttg gtggaagaaa gcaatttctt
    23641 tgaaagtagc ttcttggttc aggagggctt tatcaaacgt actaacttca caagtatgat
    23701 tgcgattgta ggtcttgctg atgcggtgaa tcatttactc aagcaagaag gtttaaatga
    23761 aacctttggg caaagcaaac gtggcgatga aattgcgacg ctgattatgg ataagctcca
    23821 agcagtaaat gacgctcata aagggctgta tgttgaacga accaataacc aatatctgtt
    23881 acacgctcaa gtgggggcaa ataaccacgc tgaagacaaa atgaacacgc cggcacaccg
    23941 cattcgtgtg ggcgaagagc caaccttatt ggcacactta aaacagtctg ctcctttcca
    24001 taaatatttc ccatccggta cgggggattt attcgccttt gaccaaacct acactgatca
    24061 tttagatgcg gtggtggata ttattgacgg ctcgttcgcc caaggttatc gctacattac
    24121 cacttacctg aaaaatactg atttgattcg agtgacaggc tacttggtga aaaaaagcga
    24181 ggttgaacgt tatcgcaaag gcgaagcggt attgcgtgat accacttggt atggttcagg
    24241 caccgatgat tgtgcgaaag tgttcgaccg ccagctgcgt gatgaagaaa atgtgaatgc
    24301 agggtaacaa tggctgcact ttctgagatt tttgtgccgt tacaccgcat tatccccttc
    24361 tcgaatgtag aagggcaggg caatcgtacc agcatttttc tacaaggttg caagctgaat
    24421 tgcctgtatt gccataaccc ggaaaccatt ccacgttata gcaaggaagc aaaacaggtt
    24481 agcttgcaat acttgtacga tcaagtgatg gaggcagttc cctttattcg aggagtcact
    24541 atttcgggtg gagagccaac cattcatcat aaaaaattag tgccactgtt cgaggcgttg
    24601 cgtgagcaag ggctaacctg ttatttagac agcagcggct tttttgattt tgaggcaaca
    24661 gagccgttaa ttaatgttac cgataaattt ctgttcgatc tcaaaggaga tggggcgggc
    24721 ttacaaacgc tatgctttga tcggaaaaac caagccggca aagtgcctga acaggctctt
    24781 ccaaacgtga atcatattaa acctgaaaac ttggctcgca atttgcaaaa tttagccaaa
    24841 ttattaccgc ttgataaggt ggaagaagta cgtttggttt acctcaatga gttttataac
    24901 gcccaccatt tgctcgaaaa agtggctgac ctacttaaac cttacccaga tgtactactt
    24961 aaaattattc gggtacacac caaaggagcg agagatgaaa caggcttggc tcgttttgta
    25021 cccactatcg agcaaaccga tgaactggca gcatttgcaa aacggcacgg tattcaaaaa
    25081 gttattacta tttactaatg gagacttacg atggatatac taattagcat aattggtgtt
    25141 tttgtgttat taggcttagg tgttttatta tcaaataatc gcaaagccat taaatttcgc
    25201 acaattttgg gcgctttggc gattcaaatt ggttttgccg ctcttattct ttactttcca
    25261 gcgggaagaa atgcattgct agctactgca aattgtgtga gcaatattat taattatggt
    25321 aacgaaggta ttagctttgt gtttggcaat ttagcgaatc cgagtaatag cagcattggt
    25381 tttgtgtttg cggttaaagt attgcctatt attatcttct tctctgcgtt aatttcaatg
    25441 ctttactacc ttggtgtgat gcaatgggtg attaaaatta ttggtggagc attacaaaaa
    25501 acactaggca cttccaaggc agaatcaatg tcagcggcag ctaattattt ttgttggtca
    25561 gacagaagct cctctagttg taaaaccata cattagccgt atgacagagt cagaattatt
    25621 tgccattatg gttggtggaa ctgcttcaat tgctggttcc gttatggctg gttatgccgg
    25681 aatgggcgtt cctttaactt atcttattgc ggcctccttt atggctgcac cagctgggtt
    25741 actatttgct aaattaatgt atcctcaaac ggaaaccttg gagagtaaag cagatgacaa
    25801 tgttgaagtt gaaaagccaa ataacgtggt tgaggcccta gctaatggtg ctagtgcagg
    25861 tgttactttg gctattaatg tcggtgctat gttaatagca tttattgcag tgatcgcttt
    25921 attaaatggc tttattggtg gcattggtaa ttggtttggt tatgaggggc taaccttaca
    25981 aattttatta ggttatttat tccaaccact tgctttctta atcggtgtgc cgtggcaaga
    26041 tgccgatatt gcaggtcaaa tgataggtat gaaacttgct gttaatgaat ttgtcggata
    26101 tcttgagttt gctaaatatc tacagcctga tgctgtggtg caattaagcg ataaaactaa
    26161 ggcaataatt acttttgctt tatgtggttt tgcaaacttt agagcaattg cggtattgat
    26221 tagtggtatc ggaagtatgg caccaagtcg gcgttcagat attgctcgtt taggtttaaa
    26281 agcagtgatt ggcggcacat tggcgaactt aatgagtgca actatagcgg gtttctttat
    26341 tggtttaagt ggtgccacat taggttgata caagcggtta aattgactca cttttttgca
    26401 aaaagcccaa gtaagttaaa tgactacttg ggctttgttt aatgaactag ctcttagttt
    26461 cggtttttgc tgtgttatcc ttttccgctt tggctgtctg tgttttcgaa gttgtctgtt
    26521 tttttgcgga ttggctagca gtagctgctt ttcttacttt ctttgtttta acttctactt
    26581 ccgcattttt agagttttta tccgctaacc atgcctgcac tttagctaag aatatttgtc
    26641 ccatcgggcg aggatcgcca gaaaataatg tttgtaattt attattttca ataatgtcgc
    26701 gtctaattgc taagcgttct tcgtggtttt ccgctaaacg aatagcttga gtaacgtatt
    26761 cctctgctgt ttgggtaatt aaccaattag gtagcccgag gcgcttaaat aaaccttcat
    26821 caatatgttc atgaacttca gggcctgttt tacagacacc aactaaacca agcgtaacca
    26881 tatcgataat gccgtttgta tttccaaatg ggaatggatt tagcatcata tcgcaattat
    26941 gtagaatatt tagatattca tcatatggcg aatgtgggtg tgcggttgca tcatttccta
    27001 aatagctttt gataaaacgt tccacataag gatgcgtaat tccactagat tgccctaatg
    27061 caaaatggaa atgagttttt accttcgccc tatcacgaat ggcttttaat gcctctaaga
    27121 aatatgggtt taatttcata gtggttgatg caattccgat atggataacc tctggatttt
    27181 cacgtaggtt atagaccaca ttttgaggcg ctaatgcgga aggcacatag ggtagcgcat
    27241 cttttggaag acgtaataat tgttcactaa agcagctttc ggaaccaaca tagtcatctt
    27301 ctacgatgac atattcaata aaatcagagt gtgtagttgc cggatgacct agcgcaacag
    27361 cttgaattgg tgctaggcga gtgttactag cgaaaatagt ggttaaatcc attccaatgc
    27421 taggcatata gaatacggct ggattatttt tatcacagat atcttttaaa aagcttaagc
    27481 ggtcaaatag tgagccatct tgtggtaata aatgaaattc gtcgaatacc tgttgcccca
    27541 tttcatctac agcatcactg cctagcccaa taagatggaa atgttcgcgt gcagcaacca
    27601 ttgaggttga atgagtacga taaatagaat gtgatgaatg gaaatgctcc aataatacta
    27661 ccatgacagg tttattattt ctggtaccaa gctgttcaat ttttctatct tcccaaccga
    27721 cagaaagtaa atgacgacga attacagcat ttaacgaccg ttttacatta tgtttatttg
    27781 cttcaatatc ataactgcaa tgcatataaa catcgtgtga aatggcgctc ggtagcttgt
    27841 tcaagttttc aatttgcgct aatttttctg ggaaccattg caaaatagcc gcgcgttttg
    27901 caaaagcaga ggatgtacca ataaatctag gtgattggag tgcaaaacaa agtgatgcgg
    27961 tgagatctga tgaagcattc catgcagcat ctagattcaa taaaatatta gattccggta
    28021 agtataaaat acagaactta attagtgctt gtaatgtggc atctaaatca accgtatttg
    28081 gattagcaga ttctttattt ctattgtaag tacgcaagat atggtctgcg tttacgtatg
    28141 gagaactggc aaaaattaat gctatccagc gttgtaatgt cagaaaacgc atagcaccgt
    28201 gttcggagat ctctaatgca ggatcttcaa acaagcgagt aatcgctacc gccattcgag
    28261 tacagaaata gatagcttta tcattttcta aattttcaat ctgctctggc atattcaatt
    28321 caatattgga aatgccacca aaattactat ctaattttga aaggatagac agtagctcgg
    28381 tacaagccga ttcataatct tttttcgcga ccgcctgctc aaaacggatg acgctaggca
    28441 tattttctgc tgacataatg tatccttagt tgtttaaaat tccccacaga tcatactcat
    28501 ctgcatgtgt aatggttact gaaataattt gccctactgt cactaattgg tttgaaggat
    28561 tatctacata gactacaccg tcaatttccg gtgcatctgc cattgagcga ccgataatgc
    28621 cttcttcgtc aatgtcatca ataattactt gtacggtttt gccgattttt gcttgtaagc
    28681 gagcagcgga aatttcttgt tgtagttgca taaaacggtg gaaacgttcc tcttttactt
    28741 cttccggaac ttgatccggc atatcggtag caacagcacc ttccactggg ctgaatttaa
    28801 agcaaccaac acgatctaat tgtgcttctt ttaagaaatc gagtaatagt tggaaatctt
    28861 cttctgtttc ccctgggaag ccgacaataa aggtagaacg cagagttaat tcagggcaaa
    28921 tttcacgcca ttttttaatg cgttctaagg ttctttcgat tgaacccggg cgtttcatcg
    28981 cttttaagat tttcgggctg gcgtgttgga gtggaatatc caaatacggc aaaattttgc
    29041 cggcagccat aagcggaatt aaatcatcta cgtgtgggta tgggtaaaca tagtgcaaac
    29101 gcacccacac gcccattgag cctaattgct cacatagcgt aattaaatta cttttaatcg
    29161 gcataccgtt ccagaaaacg gttttggttg cttcttcttt tttgcgatct aacgaatagg
    29221 ctgaggtgtc ttgtgagacg attaacagct cttttacccc ggcatcaact aggcgttttg
    29281 cttcatctaa tacttgcacg atagaacggc ttgctaaatc gccacgcatt gaaggaataa
    29341 tgcagaaagt gcagcgatga tcgcagcctt cggaaatttt caaataagcg taatgcttcg
    29401 gtgttaattt aatcccttgt tttggcacta agctggtgta agggttaaat tccggttttg
    29461 gcacatattt atggacgtgg ttcattaccg cctcatagct atgtggccct gtaatttcca
    29521 atactttagg gtgtacctca cgaatttggt tttcttttgc ccctaaacag ccggtgacaa
    29581 ttacttttcc gttagcttct aacgcttcac caatgctttc aagagattct tgtactgcgg
    29641 aatcaataaa accgcaggtg tttacaatca caagatccgc attttcataa ctagggatga
    29701 tgttataacc atccgcacgc agttcggtca aaatacgttc ggaatcaact aaatttttag
    29761 ggcagcctaa gctgataaaa ccaatatttg gtgaagcact catataactc tcaataacta
    29821 aaaagaaaaa tgcctacaat ttttgtctgt aggcaaaaaa ctaacaagat tctacaaaat
    29881 cttgcccaaa atagcgataa caagcggtca atttttaata aacatttaca aacttgaaat
    29941 ttcgctaaca attaaaatta atcgatatta tttagcattg ctaatacaat cgtggaagat
    30001 ttttctgcgg ctaatggcag aaattcttca aaagaaaggt gggattcttt gtccgctaca
    30061 tccgatactg ctcttacgat tacaaatgga aggttaaaac cgtgacaaac ctgcgcaatg
    30121 gctgctgctt ccatttcgac tgcaacgaca ttcgggaaat tctgacgaat ttgattaatc
    30181 ttatcattac cgttaataaa ggcatcgccg ctacagatta agcctgaaac cacattgtaa
    30241 ccggcttttt tcgcttcctt ttgagctaat tcgactaatt gctcgtttgg cgaaaatgtt
    30301 ggcgggtttg ccggtagttg cccgatttca taaccaaagg cggtcacatc aacatcgtga
    30361 taacgaactt cggttgaaat caaaatatca cctacgttta aatctggatc taatccaccg
    30421 gcagagcctg tattaataat catatccggc tgggtgagct gtatcagtaa ggtagtgccg
    30481 atggcggcag caactttgcc gatacccgat tgtaataatg ccacacgggt attgttaatt
    30541 ttgccttcaa aaattttaca acctgctaat tcagtgactt taggttcaac cattacttgg
    30601 cgtaaaatct caatttcttg tgccatcgca ccaataatac caattttcat tactttcctt
    30661 ctctaatgta ttgtttattt tttgaaaaaa acgctatttt aacagcatta atagtgagga
    30721 gggggtgttt cttctgcttg tgaagcaact tggcttagtt gagccccttt caatttctca
    30781 gcaatatggc gaatctgagt ttgtaactta tcaattgcaa attgttgctc aataagtgct
    30841 tgatttaact cttcaataat cagctcttgg aaagcaactt tagtctccaa ttcggtaatt
    30901 tttgccgata atgtataatt attatccatt ttttactaaa aaa
//
LOCUS       DANMCL010000022        30927 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.022, whole genome shotgun sequence.
ACCESSION   DANMCL010000022 DANMCL010000000
VERSION     DANMCL010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 30927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30927
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.022"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            330..1721
                     /gene="ffh"
                     /locus_tag="PXF40_000902"
     CDS             330..1721
                     /gene="ffh"
                     /locus_tag="PXF40_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HDL5802265.1"
                     /translation="MFENLSDRLSKTLRNITGKGRLTEDNIKDTLREVRMALLEADVA
                     LPVVRDFINKVKERALGVEVNKSLTPGQEFLKIVQSELETAMGEANEELNLAAQPPAV
                     ILMAGLQGAGKTTSVGKLAKFLKERHKKKVLVVSADVYRPAAIKQLQTLAEALKVDFF
                     PTETSQKPVAIAEAALKHAKLNFFDVLIVDTAGRLHVDGEMMEEIQQIHAVLNPIETL
                     FTVDAMTGQDAANTAKAFNEALPLTGVILTKVDGDARGGAALSIRQITGKPIKFLGVG
                     EKTDALEPFHPDRVASRILGMGDVMSLIEDIQRSVDQEKAEKIAAKFKKGDEFTLEDF
                     REQLIEMKKMGGMMSMLDKLPGAKNLPDHVKSQVDDKMFMKMEAIINSMTLKERANPD
                     IIKGSRRRRIALGSGTQVQDVNKLLKQFDDMQRMMKKMRKGGMAKMMRGVKGMMGGGL
                     GGLGGLGSMFGKR"
     gene            complement(1861..2619)
                     /locus_tag="PXF40_000903"
     CDS             complement(1861..2619)
                     /locus_tag="PXF40_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5802266.1"
                     /translation="MIPLERQREILRLINNNGVASINFLAEQLKVSHMTIRRDIQKLE
                     EQGKVSLVSGGVQSLERLIMELPHDDKSMLFQEQKSAIGSLASQLIPSNTTIYLDAGT
                     TTLEIAHRIIDRNDLLVVTNDFVIAHYLSNSGKCDLIHIGGSVCKENLSTTGSLAAEF
                     LKNLSIDMAFISTSSWNLKGLTTPNENKIPVKKAILEASKQNILVTDSSKYGKVATFF
                     VCPLTVFDQIICDKGLFENVRDALKGLSIKLDLG"
     gene            2793..3698
                     /locus_tag="PXF40_000904"
     CDS             2793..3698
                     /locus_tag="PXF40_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5802267.1"
                     /translation="MSQKYSVAVIGLGAMGMGAAKSCIAAGLDTYGVDLNPNYLETLK
                     AAGAKKVGTSAVDFAAELDAVLLLVVNANQVNAVLFGENGLAQHLKQGTVVMVSSTIS
                     AQDAKNISQKLTDLGLVMLDAPVSGGAAKAAQGEMTVMASGSSEAFEKLKPVLDAVAG
                     KVYNIGEEVGLGATVKIIHQLLAGVHIAAGAEAMALAARAGIPLDLMYDVVTNAAGNS
                     WMFENRMKHVVEGDYTPLSMVDIFVKDLGLVNDTAKSLRFPLHLASTAYSMFTEASNA
                     GYGKEDDSAVIKIFSGIELPKKEGK"
     gene            3700..4941
                     /locus_tag="PXF40_000905"
     CDS             3700..4941
                     /locus_tag="PXF40_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005754893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5802268.1"
                     /translation="MLGIIADDFTGASDIASFLTENGLKTVQMNGVPKTTLNSQVDAI
                     VISLKSRSNPVEEAIQQSLQALDWLKQNGCSQFYFKYCSTFDSTEKGNIGPVTDALMA
                     ALDTDFTVVTPALPVNGRTIFNGYLFVGDVLLNESGMRNHPITPMKDANLVRLMDAQS
                     QGKTGLVAYADVIQGAERVKARFAELKQQGYKYAVVDAADNSQLAVLAEAVADFQLVT
                     GGSGLGAYMAAYRSGGKKGTNAFVPSKGKTVVLSGSCSVMTNTQVAAYQQKAPSYFLE
                     AEKAIQDPNYVETLYQWVIANLDGDFAPMVYATVPPEKLKEIQTQFGGDKASHAIENT
                     FAKLAEKLQAAGVTNFITAGGETSSIVVQQLGFSGFHIGKQIAPGVPWLQAVEKPIFL
                     ALKSGNFGKEDFFSFAQEMFV"
     gene            4938..5570
                     /locus_tag="PXF40_000906"
     CDS             4938..5570
                     /locus_tag="PXF40_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HDL5802269.1"
                     /translation="MTEQEQKIEMVNLARSLFERGYTVGGAGNLSVRLDENRILVTPT
                     GSSLGRLEADRLSVLDMQGNVLSGDKPSKESVFHLAMYQKNPACQAIVHLHSTYLTAL
                     SCLENLDTDNAMRAFTPYYVMRVGKLPVIPYYRPGDINIARELGERALDGKAFLLANH
                     GVVVTGSDLRDAVDNTEELEETSKLYFILQGQKVRYLTDDEVNDLKNRGK"
     gene            5572..6348
                     /locus_tag="PXF40_000907"
     CDS             5572..6348
                     /locus_tag="PXF40_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005547735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxypyruvate isomerase family protein"
                     /protein_id="HDL5802270.1"
                     /translation="MPKFAANLTMMFNEVPFLDRFEAAANAGFKYVEYLWPYDYPAAE
                     LKAKLEQYGLKQVLFNTAAGDVAQGEWGVSAIPGREADSHRDIDLALEYALALGCENV
                     HVMAAVVPEGEDREAYKQTFIKNVQYAADKFKPHGINVLLEALSPEVKPNYLLKSQFD
                     TLEIVEAVNRDNVFVQLDYFHAQNVDGNLSRLTDKLKGKFAHIQIASVPDRHEPDEGE
                     INYQYIFNKLDEIGYEGYVGCEYKPRAETTSGLGWFEQYK"
     gene            6401..7759
                     /locus_tag="PXF40_000908"
     CDS             6401..7759
                     /locus_tag="PXF40_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntT protein"
                     /protein_id="HDL5802271.1"
                     /translation="MSNEMLILIGLASVVALLVIMIKGKVHPFLALGLVSIAVALTAG
                     IPMSKVIPTLISGMGSTLGSVALIVGLGAMLGKIIEKSHGADVLANWLLQRFGEKNAP
                     FALGMTGFIFGIPVFVDVGFIVLLPIIFSVARRLGGNILVYSLPIGLAMLLVHVLVPP
                     HPGIVAGAQNLNADIGFVLGIGLVAALPAYLIGQKFIPFFTKNNFVKVVTSTDLLQHQ
                     KDLIKEKGIELPSFGKVLAMISFPLILIMLGTVTATTLPKEHIVREVFSMVGSSPFAL
                     FVAVCLSAYVLGFRYGWTKHKLEEVLESALAPIAGIILITGAGGMFGKVLDASGVGKA
                     LADVLANTGLPLLVLSFILSALLRAAQGSATVATITTTTILAPAAVAAGYNDLQLALL
                     TAAIGAGSMTLSHVNDSLFWVWTKFFNVPVSVGLRTWTFLTTIFGVIAFAVVGIIWML
                     FV"
     gene            7821..9161
                     /locus_tag="PXF40_000909"
     CDS             7821..9161
                     /locus_tag="PXF40_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase"
                     /protein_id="HDL5802272.1"
                     /translation="MLKKTLLFTLLLSHSLYAEDMIQENKSANITLLAEITAQGQKIN
                     GVALEYPDNVLSGSDLRQLYQVKTALDSAEKENRSVLKAYVNNEPKVTALPQAGKFVI
                     IELDTADKNAATYSVKDANKAPMKFKSKDENGNIVETEKVQAVKIPEFFANRLIYSVE
                     QKGLLKLTSGTTLGKTEWTQTAEPDKIKTPYLDDFVAKQVSLDQSGNKLNYRLYSPLQ
                     KNGEKYPLVIFLHGSGQVGSDNLAHLLSSKGAIATLPYAPSFVLAPQYDQVFDPFDNA
                     AKGQKGGIHWQTENRINLVLKMIDETLKANPQIDTTRIYINGLSRGAEGGLNLLLARP
                     NFFAGALLMSGREAYTNEWVDGNATKTNLAAIKHIPIWFFHSKEDKVSPVKGSRINYR
                     ILKDELNAPNVKYTEFTFEQAGDNGIVNNNPHNTWDAVYNSPEVIGWLLQQKRH"
     gene            9173..9862
                     /locus_tag="PXF40_000910"
     CDS             9173..9862
                     /locus_tag="PXF40_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005577085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HDL5802273.1"
                     /translation="MFMYLSHPLDPKDLAWPGEPVVEVTRCTDVGEETPFSSFITKLP
                     NHCGTHMDAPRHFVKDGLSINELPIEYFCHKEVALIEIPKGEAEGITKEDLLPYVDIL
                     SKVSFAFLRTGFEKYRTENPAIYQNECPYISTGAGQYLSDTFPNLKGVGIDFLALGSP
                     SSRVPDAENPKNCHRAILGYYTGRFTTVIEDMHLAELPKNANIKQFFNAPWRIKGLDS
                     SQVTCIVELQQ"
     gene            10019..11836
                     /locus_tag="PXF40_000911"
     CDS             10019..11836
                     /locus_tag="PXF40_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme anaerobic degradation radical SAM
                     methyltransferase ChuW/HutW"
                     /protein_id="HDL5802274.1"
                     /translation="MIIKDTHWTSQQASPNAFPERQALMPIWGGKNIERNQWQSLWLE
                     QAPNALLQDGLAYFHIPFCASHCIFCGFYRNAWKENYSQIYTDRVISELRYESSLWRG
                     QGKIHAVYFGGGTPTALHTEDLVRLIRACYRYLPLAEDCEFTIEGRISHFDIDKAKAC
                     IEAGVNRISIGIQTFNSEIRKRLGRKHSGEEAQTYLKALSELNAVIVADLIFGLPNQT
                     DDIWQNDIEIATSLPISGLDIYAFNNYPFLPINRLIEHGKLPAPAGFDTQSLHYAYAV
                     EKLKAQGWQQVSNNHFAFPNRGERNRYNTLVKSNMPCLAFGSGAGGNFGGLSYQVQSD
                     LKTYLDSPLDQKSLSFLSKHGEHKALLGVIQHSMELGYLDTTPFEQNAKAEKLLQQWE
                     ALDLLKREKNQVYLNTSGRYWSPTLIRKLMLTLPQSSKDNNMITPLTKELENKLRTNL
                     KENPGQILEMLAGMNQCSLESVINCLPKEMVMQTGGERFVEIMQAIAGWNEAVTFIIH
                     TPDAIAEVTAKLPQGKIGRGFYNFEHGVDGGIHGHLRYENCAAIYLLDRPFMGKRTVA
                     LTFINQSGEAMFKIFVGRDEQGQLRENQIQAMRKLIGGC"
     gene            11839..12456
                     /locus_tag="PXF40_000912"
     CDS             11839..12456
                     /locus_tag="PXF40_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5802275.1"
                     /translation="MILVCGANGLLGRAICDKLPREKTIAVLRKDAMDTFFSERNIAV
                     EIADLLDLESCNALLQKTQPEILITVVGGKNEQGIRSDKTANINLIKAVEKYSPTTKV
                     VLVTSVGCAEQWDLISPLAQQALGEALKAKTEAEAYLQQTALNWLIIRPGGLNNDEVN
                     DEYQIVRDLPNERKMYVSRKSVATGIVRLLDSTENHQIFSIINRG"
     gene            complement(12540..13151)
                     /locus_tag="PXF40_000913"
     CDS             complement(12540..13151)
                     /locus_tag="PXF40_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentahemic C cytochrome"
                     /protein_id="HDL5802276.1"
                     /translation="MKSLSKIAFCFLAFIMPTFCFAGSNSYTTETIPLFADENLTQKI
                     GQLEAGAEIKLVQTTAKAAEIELNLWRKSKGFGRIWYHSFSKNITDAVFEKSFISNNP
                     LLEIVESKEDPNTGLVWQKVKMNVWVENAEFTQDLTNFWANTKNTYKTECSVCHKQRD
                     PKMHDANEWIAVFNGMVGFTDMDEATQKKVLRYLQMNAAASSQ"
     gene            13346..14254
                     /gene="glyQ"
                     /locus_tag="PXF40_000914"
     CDS             13346..14254
                     /gene="glyQ"
                     /locus_tag="PXF40_000914"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HDL5802277.1"
                     /translation="MSTKFNVKTFQGMILALQDYWASKGCTIVQPFDLEVGAGTSHPM
                     TCLRALGPEPMAFAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLDS
                     LKMLGFDPTQNDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPV
                     TGEITYGLERLAMYIQGVDSVYDLVWSDGELGKTTYGDVFHQNEVEQSTYNFEYADVD
                     FLFQCFEQYEKEAQYLLGLEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILR
                     IRALTKGVAEAYYASREALGFPGCKK"
     gene            14334..14594
                     /locus_tag="PXF40_000915"
     CDS             14334..14594
                     /locus_tag="PXF40_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802278.1"
                     /translation="MKPILYFADWCPDTAPFVAELDRLGIEYEPCDITKGGSTLKPFL
                     KLRDTHSAFDHAKANGYIGIPALLIEGEKVVLDLAELEGIFG"
     gene            14637..15671
                     /locus_tag="PXF40_000916"
     CDS             14637..15671
                     /locus_tag="PXF40_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5802279.1"
                     /translation="MKTVIADNSAEFVNEISQLIQSSKQRMTVAVNAELTLLYWHIGK
                     RINDYILQGERAEYGQEVVKNLAQSLTEQFGKGWSKRHLNYTMQFATTFPNLEIVHAL
                     RAQLSWTHFKQIIHIDDPTKRGFYATMAAQERWSTRTLEDRIGSLLFERTAISKKPDE
                     TIIAELSLLREKGEYNQSMVLKDPYILDFLDLNDRYMERDLEDAILREIEQFLLELGA
                     GFTFVARQKRIQIDNDDFYIDLLFYNRKLKRLIAIELKTESFKHSHKSQMELYLAWLA
                     KYEQEADENPPLGMILCTGKKQEQVELLDLKNSDIHIAEYMTVLPSKAVLEQRLHLAV
                     ERAKERFLLK"
     gene            16049..16513
                     /locus_tag="PXF40_000917"
     CDS             16049..16513
                     /locus_tag="PXF40_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802280.1"
                     /translation="MSIKKLLSTTIDQLENIIQVSGESFEKITSDLAEKAKELNSEYN
                     IKCEKLGYAITLFEKNSEIEKRYISLLSDFDMDTSIKGFEKLSLLMNGKNDNARKEAE
                     EHFNELQNGLLEAQDYKKDLDIKIRKLARELYNENIAQLEIEEIKEHLYKNW"
     gene            16522..18588
                     /gene="glyS"
                     /locus_tag="PXF40_000918"
     CDS             16522..18588
                     /gene="glyS"
                     /locus_tag="PXF40_000918"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HDL5802281.1"
                     /translation="MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEK
                     VEWFAAPRRLAVKVLSLAESQPSKEVEKRGPAVSAAFDAEGKPTKAAEGWAKGCGITV
                     EQAERIATDKGEWLVHRAVIEGQPTKNLLVDIIAKSLANLPIPKTMRWGDKTEQFVRP
                     VHTVTLLFGAELIEGEILGVKSGRTIRGHRFLGEREFQIENADQYPQLLKDRGSVVAD
                     FNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEYPNVLTAKFEERFLAVPAEA
                     LVYTMKGDQKYFPIYSKDGKLLPHFIFVSNINPEDPSKIIEGNEKVVRPRLTDAEFFF
                     KTDLKQKLEDQLPRLETVLFQQQLGTLRDKTARIEALAGEIAKQIGADETKAKRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDNLPNSLVAC
                     SVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLTDLVAKSA
                     QLFGDKLTNKDVVEDVVDFMLGRFRAWYESEGIAVDVIQAVLARRPTKPADFDARVRA
                     VSHFRTLDSAEALAAANKRVSNILAKADIAIGDIDVSACVEPAEKALAEAVIALKAEV
                     QPLIAQGDYTAVLDKLANLRQPVDAFFDGVMVNAEDQKLRQNRLAILSTLQGLFLQVA
                     DISLLQ"
     gene            complement(18693..19994)
                     /locus_tag="PXF40_000919"
     CDS             complement(18693..19994)
                     /locus_tag="PXF40_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HDL5802282.1"
                     /translation="MNIHCEKLVQSILHAVNHEVVPALGCTEPISLALASAIARQYLG
                     HLPERIEAKVSPNLMKNGMGVAVPGTATVGLPMAAAIGAIGGEPDGGLEVLKNITPEQ
                     VKQAKAMLNTDKVSVSIFETEHILYSEATLFHQANRVCVRIAEHHTNVIYIEKNGQTI
                     LSKPCAVNNDNTTEIFASLSAKDIFNFSMQIELEKIRFIEQAAQLNSALSQEGLRADY
                     GLHIGRTLQKQIGLGLISDDLLNRIVIETTSASDARMGGASLPAMSNSGSGNQGITAT
                     MPIVVVARHLNVTDEQRIRALFLSHLMAIYIHSKLPKLSALCAVTTAAMGSCAGIAWL
                     LTGKFENISMAISSMIGDISGIICDGASNSCAMKVSTSVTSSYKSILMSMDNSQVTGN
                     EGIVEHDIDRSINNLCSIASRSMQYTDRQVIEIMVNKPKLK"
     gene            complement(20008..21285)
                     /locus_tag="PXF40_000920"
     CDS             complement(20008..21285)
                     /locus_tag="PXF40_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802283.1"
                     /translation="MDTQKLSPAEFKQATKFDSTDFGWIIMSIGMAIGAGIVFLPVQV
                     GLMGMWVFLLSSIIGYPAMYLFQRLFINTLAESPECKDYPTVISGYLGKNWGIFLGVL
                     YFIMLVIWMFVYSTAITNDSASYLLTFGITNTLLSDNPFYGLVLICILVALSSRGEKL
                     LFKISTFMVLTKLFVVAALGLAMIGMWQLHNIGAMPPFGKLIKDAIITLPFTLTSILF
                     LQTLSPMVISYRAKEQSREVARYKALRAMNIAFAILFITVFFYAVSFTLAMGREEALK
                     AYEQNVSALAIAAQFFPGSWATYVGVALNIFAVMTAFFGVYLGFREATQGIVMNLLLR
                     KFPAEKINPNYVQKGIMLFSILLAWSAIVLNAPVLSFTSICSPIFGLVGCLIPAYLVY
                     KVPALFKYKGLALNIIIITGILLCISPFLTFLE"
     gene            complement(21314..21982)
                     /locus_tag="PXF40_000921"
     CDS             complement(21314..21982)
                     /locus_tag="PXF40_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HDL5802284.1"
                     /translation="MPDKLEYLHDLDKEIMLSYFSLSEAIAGLLGEFCEVVIHSLNAY
                     EKSVIKIINGHHTNRKIGSPITDKGLQLLKCYQKDQSNTELVYFSRLNNGNLVKSTTH
                     IIIGHEGKPIGLFCINLNLSTPLDKTVSSFMNYDPIPPHYKSENFITHPKELIEETFL
                     KAVTHIEQHTTKHSKLYKKSIIFYLFENGIFELKEAVPIVAEKLSLTSHAIYKHLREF
                     KNNT"
     gene            22216..22506
                     /locus_tag="PXF40_000922"
     CDS             22216..22506
                     /locus_tag="PXF40_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5377 domain-containing protein"
                     /protein_id="HDL5802285.1"
                     /translation="MSVKTEVLFSNHWNVRVSDPGFEGSPSHYFETVYLTLEAFINGE
                     NVHYEFTRKVEQEVKTHRSFTDVNELFEFLGEYLSPVALGNVGVRIGQLGLA"
     gene            22573..23484
                     /gene="xerC"
                     /locus_tag="PXF40_000923"
     CDS             22573..23484
                     /gene="xerC"
                     /locus_tag="PXF40_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HDL5802286.1"
                     /translation="MTTSNPLFQQTRPYWDFLRIEKQVSPHTLSNYQRQLMAVSELFS
                     QAGIENWEEVESSSVRWMLSQSHKQGLSAKSIGLRLVALRQWFVYLIKIGRMSANPTL
                     GVKSPKVGKHLPKNIDAEQVGQLLAIESDEPSDIRDIAMMELMYSSGLRLSELQGLDL
                     GDMDLSAREVRVQGKGSKERIVPIGSQALKALNRWLEMRLQFKPQDNAVFLNKRGGRL
                     SHRSIQLAMKKWGERQGLESHLHPHKLRHSFATHMLEASGDLRAVQELLGHSSLSTTQ
                     IYTHLDFQHLAKIYDSAHPRARRKQED"
     gene            complement(23481..23852)
                     /locus_tag="PXF40_000924"
     CDS             complement(23481..23852)
                     /locus_tag="PXF40_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HDL5802287.1"
                     /translation="MKYLYIICGFICIGLGIIGAVLPGLPTTPFLLLALFCFTKGSER
                     IRQWFIQTKLYKKYLQEYDEKRAMTMKQKITILAISFPFTLFAFFALPHIGGKIALVV
                     LVIIQYWYFFCKMKTLEPENA"
     gene            complement(24008..24097)
                     /locus_tag="PXF40_000925"
     tRNA            complement(24008..24097)
                     /locus_tag="PXF40_000925"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24061..24063),aa:Ser,seq:tga)
     gene            complement(24189..25280)
                     /gene="trmA"
                     /locus_tag="PXF40_000926"
     CDS             complement(24189..25280)
                     /gene="trmA"
                     /locus_tag="PXF40_000926"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HDL5802288.1"
                     /translation="MTLPIEQYSDLLAKKTENLTALLKPFNPPAIEVFASKPSHFRMR
                     AEFRVWHEEGELYHIMFNPETKARYRVDSFPIASELINHMMTALLAEIKGNELLTRKL
                     FQIDYLSTLSGEIAVSMLYHKSLNEEWVEQANALKSRLEQQGFKVQIIGRANKQKIAL
                     DCDYVEEILPVHGKNYVYRQVENSFTQPNAEMNIKMLEWARNCTKNSEGDLLELYCGN
                     GNFSIALAENFRKVLATEISKSSVQSAQYNIEKNGIVNLQIIRMSAEEFTQAMNGVRA
                     FYRLKGIDLNAYECNTIFVDPPRAGLDQATLNMVQAYERILYISCNPETLAENLQQLS
                     QTHRIEKAALFDQFPYTHHIESGVWLIRK"
     gene            complement(25345..25677)
                     /locus_tag="PXF40_000927"
     CDS             complement(25345..25677)
                     /locus_tag="PXF40_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF413 domain-containing protein"
                     /protein_id="HDL5802289.1"
                     /translation="MADSFSVTRRFFDDKNYPRGFSRHGDYTIRESQTLEQFGQACLA
                     LESGERKPATQEEKRFVAVMKGEEVAETDIEKAWLKYRTLTSKTKRIYTLSGNAGSDA
                     GDDFSAAE"
     gene            25898..26554
                     /locus_tag="PXF40_000928"
     CDS             25898..26554
                     /locus_tag="PXF40_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5802290.1"
                     /translation="MINFNIWRYTVANHSNHSNHSNHSNHSNHSNHSNHSNHSNHSNH
                     SNQSANQYIFNSDWFTHNVPSLASIFEYVKPRRILEIGSFEGRSSVFFIEEALKYQSQ
                     VEIHCIDSWEGGAEHQGVWDMGEIEQRFIHNVTLAQQKFQNVVLYKHRGYSHQKMIEL
                     LANGYINYFDYIYIDGSHEAPDVLFDALLAHRLVRKGGVISFDDYLWSPDETGKQRHY
                     "
     gene            complement(26761..27009)
                     /locus_tag="PXF40_000929"
     CDS             complement(26761..27009)
                     /locus_tag="PXF40_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HDL5802291.1"
                     /translation="MTEINRFKLEWACRRGMRELDKMIMPFYQNHFNELNETQQQAFV
                     EMLNYSDPELFRWVMLQAPAPTEEIAELIRLMRDKIET"
     gene            complement(27009..27953)
                     /gene="ispH"
                     /locus_tag="PXF40_000930"
                     /gene_synonym="lytB"
     CDS             complement(27009..27953)
                     /gene="ispH"
                     /locus_tag="PXF40_000930"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HDL5802292.1"
                     /translation="MKILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNKF
                     VVDGLKAKGAIFVEELHEVPDDAIVIFSAHGVSQVVRQEAKNRGLKVFDATCPLVTKV
                     HMQVARASKKGTKAILIGHEGHPEVIGTMGQYNNQEGGIYLVESVEDIANLPVSNNDE
                     LTFMTQTTLSIDDTIGVIEALKEKYPAIQGPRKNDICYATTNRQHAVRELAEQSQLVL
                     VVGSKNSSNSNRLAELASRMGVMSKLIDGPQDIDPTWLEGIETIGITAGASAPEVLVQ
                     SVISHLKTLGVTEVETLVGNEEDVVFEVPKELRIKEVK"
     gene            complement(27964..28443)
                     /gene="lspA"
                     /locus_tag="PXF40_000931"
     CDS             complement(27964..28443)
                     /gene="lspA"
                     /locus_tag="PXF40_000931"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HDL5802293.1"
                     /translation="MKTGLKFLWVSLIVIIIDLWSKYIVVQHFEFGESINILPIFNFT
                     YARNYGAAFSFLADHSGWQKYFFLGLAVVISSALVVALWKNQAVKKLENIAYALIIGG
                     AIGNAIDRAYNGYVVDFLHFYWDIYHYPVFNIADIAICVGAGLLILEAFITKKEPKK"
     gene            complement(28524..28862)
                     /gene="glnB"
                     /locus_tag="PXF40_000932"
     CDS             complement(28524..28862)
                     /gene="glnB"
                     /locus_tag="PXF40_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005654045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HDL5802294.1"
                     /translation="MKKIEAIIKPFKLDDVREALTDVGVSGMSITEIKGFGRQKGHTE
                     LYRGAEYAIDFLPKVKVEIVIPDELEEQCIEAIMETAQTGKIGDGKIFVYDVGRVIRI
                     RTGEENEEAI"
     gene            complement(28872..29477)
                     /gene="mog"
                     /locus_tag="PXF40_000933"
     CDS             complement(28872..29477)
                     /gene="mog"
                     /locus_tag="PXF40_000933"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HDL5802295.1"
                     /translation="MTACKPLSKEKLKIGLVSVSDRASQGVYSDQGIPELRAWLESAL
                     TEPFELETRLIPDEQAIIEQTLIELVDAHACHLVLTTGGTGPAKRDVTPDATLAVAHR
                     EMPGFGEQMRQVSLHFVPTAILSRQVGVIRHDSLILNLPGQPKAIKETLEGVKDEQGK
                     VLVKGIFSAVPYCLQLLSEIYVETHAAICESFRPKSARREN"
     gene            complement(29474..30385)
                     /gene="ccmI"
                     /locus_tag="PXF40_000934"
     CDS             complement(29474..30385)
                     /gene="ccmI"
                     /locus_tag="PXF40_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HDL5802296.1"
                     /translation="MNFWLAIIFVTLIVCGVAFYPLLKKNKQIDNTKRDSLNKAFYFD
                     RLKEVENEANEGVIDDPEQTKLELQKNLLDDIPHSTQSATSEKLTLGKSWFVALILFV
                     GGISFAIYSNVGSWFSNSMLDTTHQKLDSFYERLKTEETNPLSQEEMNQFAMALRVDL
                     QSNPNDDKKWYMLGQIGMALDDGQLAHDAFSKAAQLKPDNLDYKLSHAQLLLFSEAQE
                     DKKQGETLLKEIIRQDHTNFNALSLLAFHSFEKEDFKMAAMTWGMMLKLLPDEDPSKV
                     TVERSFNMALSNLSEAEKQELQKGEKK"
     gene            complement(30382..30867)
                     /locus_tag="PXF40_000935"
     CDS             complement(30382..30867)
                     /locus_tag="PXF40_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HDL5802297.1"
                     /translation="MKIKTLSLIMLLSVTVNAAPVELHQFDSPKQESDYRALIQELRC
                     PQCQNNNIADSNATIATDMRAKTLELLKQGKSKDEVVDYMIERYGNFVTYDPPLTPAT
                     IMLWLLPLILIALGLGVVLRRKKNKPQAVNFEQNTAKPTTHLAQDEQERLNQILNKEE
                     K"
BASE COUNT         9117 a         6117 c         6714 g         8979 t
ORIGIN      
        1 gaagccctga tgagcaatca tcagggtttt cttttcgctc ttattttttc aaacaataat
       61 atccccttta attttgtaat ttacctctca tttctaacat aaatttgaaa atatcacttc
      121 acttttatac gcaattcgga gtattatgat cgcacaatat aactaaataa tgattcctcg
      181 aatatcgtca aattttacgg catagtttaa tcgctatgcc gtttttttat ttccctataa
      241 ccgtaacgct tttttttgta taatggcggc aactttccgc tcacaagcgg tacttttttc
      301 ctaaaatttt gcaaattgag aaagctgata tgtttgaaaa cctctctgac agactgtcta
      361 aaacgctgcg taacattacg ggcaaaggtc gcctaacgga agataatatt aaagataccc
      421 tgcgtgaagt tcgtatggca ttgttggagg cggatgttgc cctccctgtt gtgcgtgatt
      481 tcatcaacaa ggtcaaagag cgtgcgttag gggttgaggt aaacaaaagc ctcacgccgg
      541 ggcaagagtt cttaaaaatc gtacaaagcg aattagaaac ggcaatggga gaagccaacg
      601 aggagctgaa tcttgcggcc caaccgcctg cggtaatttt aatggcaggt ttgcaaggtg
      661 cgggtaaaac cacctctgtc ggcaaattgg caaaattcct gaaagaacgc cacaagaaaa
      721 aggtgttggt agtttctgcc gatgtttacc gccctgccgc tatcaagcag ctacagaccc
      781 ttgctgaagc gttaaaagtg gacttcttcc cgaccgaaac cagccaaaaa ccggtagcga
      841 ttgcagaagc ggcactgaag cacgctaagc ttaatttctt tgatgtattg attgtggata
      901 ctgccggtcg tttacacgtt gatggcgaaa tgatggaaga gatccaacaa atccacgctg
      961 tgctgaatcc gattgaaacg ctatttacgg ttgatgcgat gaccggtcaa gacgccgcca
     1021 acaccgcaaa agcctttaac gaagcgttgc cgcttaccgg tgttattctt accaaagtcg
     1081 atggcgatgc ccgaggcggt gcggcacttt ctattcgcca aatcaccggt aaaccgatta
     1141 aattcttagg tgtgggtgaa aaaactgatg cccttgagcc gttccaccct gaccgtgtgg
     1201 cttcccgcat tttaggtatg ggcgatgtaa tgtctttaat tgaagatatt caacgctcgg
     1261 ttgatcaaga aaaagcggaa aaaattgccg ccaaattcaa aaaaggcgat gaatttacct
     1321 tggaagattt ccgtgagcag cttatcgaaa tgaaaaaaat gggtggaatg atgtcgatgc
     1381 tcgataaact accgggggcg aaaaacctgc ctgaccacgt taaaagtcag gttgatgata
     1441 aaatgttcat gaaaatggaa gccatcatca attctatgac cttaaaagag cgggcaaatc
     1501 cggatattat taaaggctca cgccgccgcc gtatcgcact tggctccggc acacaggtgc
     1561 aagatgtaaa taagctgctc aagcagtttg atgatatgca acgtatgatg aaaaaaatgc
     1621 gtaaaggcgg aatggcaaaa atgatgcgtg gtgttaaagg tatgatgggt ggtggtctag
     1681 gcggtctcgg tggcttaggc agtatgtttg gtaaacgtta atattcctat tttattagta
     1741 ccagccgaaa atcagttaac aatccgttgc taggattgtt aactttccct attaatatct
     1801 tatttgcaaa aataatactt tttgattgct tgtcgttctc agaaaaaatt ggtaagaaga
     1861 ttatcctaaa tctaatttaa tacttagccc tttcagtgcg tctcgtacat tctcaaataa
     1921 tcctttatca caaataatct ggtcaaatac agtaagaggg caaacaaaaa aagttgcgac
     1981 ttttccatat tttgaagagt ctgtcactaa aatgttttgc ttggatgcct ctaaaattgc
     2041 ttttttaacg gggattttat tttcgttcgg cgttgttaga ccttttaaat tccaggatga
     2101 agtagatata aatgccatat cgattgatag gtttttcaga aattctgctg caagtgaacc
     2161 agttgtcgat aggttttctt tacagacact tcctcctata tgaattaaat cacattttcc
     2221 tgaattacta agatagtgag caataacaaa atcgtttgtt acaactagta agtcatttct
     2281 atcgattatc cgatgagcta tttctaatgt agtagttcca gcatcaagat aaatagttgt
     2341 gtttgaggga attagctgtg atgctaaaga tcctatagct gatttctgct cttggaataa
     2401 cattgattta tcatcgtgtg gtaattccat gattaatcgt tcaagagatt gaactccacc
     2461 agatactagg gataccttac cttgctcttc cagcttttga atatcacggc gaattgtcat
     2521 atgtgatact tttagctgtt ctgccagaaa attaatactt gcgacaccat tattattaat
     2581 aagtcgtagt atttctcgtt gtctctctaa ggggatcatt ttttaaccta ttttaattgt
     2641 taaaagagat tatatcagat ttagtttcca aaattaaaat cacaaaaatt cacatttatt
     2701 gttaatattt gtgatcttca tcacagattt tatcttttct attggttaat ataccgccat
     2761 caagttcatt aatttatttg agggaataaa caatgagtca aaaatatagc gtagccgtca
     2821 tcggcttagg agcaatgggt atgggagcag caaaatcttg tatcgctgcc ggattagaca
     2881 catacggtgt ggatcttaac ccgaattatc tggaaacctt aaaagcagca ggtgctaaga
     2941 aagtcggcac aagtgcggtc gattttgccg ctgaattaga tgcggtgttg ttgttggtgg
     3001 ttaatgccaa ccaagtgaat gcggtgttat tcggtgaaaa cggcttagcc caacatttga
     3061 aacaaggtac ggtggtgatg gtatcttcca ccatttctgc acaagatgca aaaaatattt
     3121 cacagaagtt aacagattta ggcttggtga tgttagatgc tccggtttcg ggtggggcag
     3181 caaaagcagc acaaggtgaa atgactgtga tggcatcagg ttccagcgag gcattcgaga
     3241 aattaaaacc ggtattagat gcggttgcag gcaaagtgta taacattggc gaagaagtcg
     3301 gcttgggtgc aacggtaaaa attatccatc aattacttgc cggtgtgcat attgccgcag
     3361 gtgcagaagc aatggcattg gcggctcgtg ccggtattcc gcttgattta atgtatgacg
     3421 ttgtaaccaa tgcggcaggc aattcttgga tgtttgaaaa ccgaatgaaa cacgttgttg
     3481 agggcgatta caccccactc tctatggtgg atatttttgt gaaagatttg ggattggtga
     3541 acgacaccgc aaaatctttg cgtttcccgc ttcacttagc cagcaccgct tattctatgt
     3601 ttaccgaagc cagcaacgca ggttacggca aggaagatga tagtgcggtc attaaaattt
     3661 tcagtggtat cgaattacct aaaaaagagg ggaaataaga tgttaggcat tattgcagac
     3721 gatttcaccg gtgcgagtga catcgccagt ttcttaaccg aaaacgggct aaaaacggtg
     3781 caaatgaatg gtgtgccgaa aactacactt aacagtcaag ttgatgcgat tgtgattagc
     3841 ctgaaatctc gctctaaccc tgtggaagaa gcaatccaac aatcattaca agccttagat
     3901 tggctgaaac aaaatggttg ctcgcaattc tactttaaat attgttccac ttttgacagc
     3961 acggagaaag gcaatatcgg gccggtaacc gatgccctaa tggcggcatt agataccgat
     4021 tttaccgtag tcacaccggc tctgcctgtc aatggcagaa ccattttcaa cggctatttg
     4081 tttgtgggcg atgtgctact gaatgaatct ggtatgcgta accacccgat taccccgatg
     4141 aaagatgcca acttggtgcg tttaatggat gcacaatctc aaggcaaaac cggcttggtt
     4201 gcctatgctg atgtgattca aggggcagag cgtgtgaaag cccgttttgc tgaattgaaa
     4261 cagcaaggct acaaatatgc ggtagtagat gctgccgata attcacaact tgcggtgctt
     4321 gccgaagcgg ttgccgattt tcaattagtc acaggcggtt caggcttagg ggcttatatg
     4381 gcggcttacc gttcaggcgg caaaaaaggc acgaatgcgt ttgtaccaag caaaggcaaa
     4441 accgttgtgc tttcgggttc ttgctcggta atgaccaata cccaagtggc ggcttaccag
     4501 caaaaagccc caagttattt cttagaagcg gaaaaagcca ttcaggatcc gaactatgta
     4561 gaaacgcttt atcaatgggt gattgcaaac ctagacggtg actttgcccc aatggtttat
     4621 gccaccgttc cccctgaaaa attgaaagag attcaaaccc aattcggcgg cgataaagcc
     4681 agccacgcca ttgaaaatac ctttgccaaa ttagccgaaa aattacaagc cgcaggcgta
     4741 actaacttta ttaccgcagg cggtgaaact tcgagcattg tggttcagca acttggattc
     4801 agcggtttcc acatcggcaa acaaattgca ccgggcgtgc cgtggttaca agcggtcgaa
     4861 aaaccgattt ttcttgcatt gaaatcgggt aacttcggta aagaagattt cttcagtttt
     4921 gctcaggaga tgtttgtatg acagaacaag aacaaaagat tgaaatggtc aatcttgccc
     4981 gctcgctgtt tgagcggggc tataccgttg gcggtgcggg caacctctcc gtgcgtttag
     5041 atgaaaatcg cattttagtt accccaaccg gctcttcgct cgggcgttta gaggcagacc
     5101 gcctttccgt attggatatg cagggtaatg ttctttcagg agataaacct tcaaaagaat
     5161 cggtattcca cttggcgatg tatcagaaaa atccggcttg ccaagcaata gtgcatctgc
     5221 attccactta tttaaccgca ctttcttgct tggaaaattt ggataccgac aacgctatgc
     5281 gtgctttcac cccttactat gtgatgcggg taggaaaatt gccggtcatt ccttactacc
     5341 gtccgggcga catcaacatt gcccgagagc tgggggaacg agccttagac ggcaaagcct
     5401 ttttactggc aaatcacggg gtggtagtca caggttcaga cttgcgtgat gcggtggata
     5461 acacagaaga gttggaagaa acctccaagc tctattttat tctacaaggt caaaaagtcc
     5521 gttatctcac cgatgacgaa gtcaatgatc tgaaaaacag aggaaaataa aatgcctaaa
     5581 tttgcagcaa accttacgat gatgtttaac gaagtgccgt ttttagatcg ttttgaagcg
     5641 gctgccaacg ctggatttaa atatgtcgag tatttatggc cttatgatta tccggcagca
     5701 gaattgaaag ccaaacttga gcaatatggc ttaaaacagg tgttgttcaa taccgcagcc
     5761 ggagatgttg ctcaaggtga atggggtgtt tctgccattc cggggcgtga agctgatagc
     5821 catcgtgata ttgatttagc gttggaatat gccctcgcct taggttgtga gaatgttcac
     5881 gttatggcag cggtcgtgcc agaaggcgaa gatcgtgaag cctataaaca aacctttatc
     5941 aaaaacgtgc aatatgccgc cgataaattc aaaccgcacg gcattaacgt cttgcttgaa
     6001 gccctaagcc ctgaagtgaa accgaattat ctgcttaaaa gccagtttga tacgctagaa
     6061 attgtggaag cggtaaaccg agacaatgtg tttgtacagc ttgactactt ccacgcacag
     6121 aatgtggacg gcaacttatc tcgcctaacc gacaaactca agggtaaatt tgcccacatt
     6181 caaattgcct ctgtgccaga tcgccacgaa ccggacgaag gggaaattaa ctaccaatat
     6241 atcttcaaca aactcgatga aatcgggtat gaaggctatg taggttgcga gtataaacca
     6301 cgagcggaaa ccacctcagg actaggttgg tttgagcagt ataaataacc acgatgatta
     6361 gcggataaat acgtgaatac aacatttaga aggaaacttt atgtcaaatg aaatgttaat
     6421 tttgattgga ttagcaagcg tagttgctct tctggtcatt atgattaaag gtaaagtaca
     6481 cccattctta gcattggggt tagtgagtat cgcagttgcc ttaactgcag gtattccaat
     6541 gagtaaagtg atcccaacct tgatttcagg tatgggaagt actttaggta gcgttgcact
     6601 catagtaggt ttgggagcaa tgttagggaa aatcattgaa aaatctcacg gtgcggatgt
     6661 attagcaaat tggttgttac agcgttttgg tgagaaaaac gctccctttg cattaggtat
     6721 gacaggtttt atattcggta ttcctgtttt cgttgatgtt ggttttatcg tattgctccc
     6781 gattattttt agtgtagcga gacgtttagg gggaaatatc cttgtttatt ctttgccaat
     6841 cgggcttgcg atgttacttg ttcacgtttt agttccacct catccaggta ttgtagcggg
     6901 tgctcaaaac ttaaacgcag atattggctt tgtattggga attggcttag tagcagcgct
     6961 acctgcatat ttaatcggtc aaaaatttat tccgttcttt acaaaaaata atttcgtaaa
     7021 agtagtaact tcaaccgatc ttttacagca ccaaaaagat ttgattaaag agaaaggcat
     7081 tgaactacct tcttttggta aagtgttagc aatgatttct ttcccgctaa tcctgattat
     7141 gttaggtaca gtaacggcaa caaccttgcc gaaagaacat atcgtgcgtg aagtattcag
     7201 tatggtagga agctctccgt ttgccttatt tgtggctgtt tgtctttctg cttatgtatt
     7261 aggttttaga tacggttgga ctaagcataa attagaagaa gtactggagt ctgcgttagc
     7321 accgattgcg gggattattt taatcaccgg tgcaggcggt atgttcggta aagtgttaga
     7381 tgccagtggc gtaggtaaag cattagcaga tgtattagcc aacacgggct taccgttatt
     7441 ggttctttct ttcatacttt ctgcattatt gcgtgcagca caaggttctg caacggtggc
     7501 aactattact actacaacta ttctagctcc tgcagctgta gcagcaggtt ataatgatct
     7561 gcaattagca cttcttactg cagctattgg tgcaggttct atgacattat cccacgtgaa
     7621 tgattcactc ttctgggtat ggacgaaatt cttcaatgtt cctgtatccg taggcttaag
     7681 aacttggacg tttttaacga ctattttcgg tgtaatagcc tttgccgttg ttggcattat
     7741 ttggatgtta ttcgtttaat atcactctgt tactgcttaa aatccacctc ttatgaggtg
     7801 gattttttta ggagaaacct atgctgaaaa aaacactttt atttacgcta ttactttctc
     7861 actccctcta tgcagaggat atgattcagg aaaataaatc agcgaatatt acgttgcttg
     7921 ccgaaatcac cgctcaaggt caaaaaatta acggcgtggc attggaatat cctgataatg
     7981 tcttatcagg cagcgatctt cgccaactgt atcaggtcaa aacggcatta gatagtgcgg
     8041 agaaagaaaa ccgttcggtg ctcaaagcct atgtcaataa tgagccaaaa gtgaccgcac
     8101 ttccgcaagc cggtaaattt gtgattattg aattggatac ggcagataaa aatgcggcaa
     8161 cttatagcgt aaaagatgct aataaagcgc cgatgaaatt taaatccaaa gatgaaaacg
     8221 gcaacattgt agaaacagag aaagtacaag cggtcaaaat tccagagttt tttgcaaatc
     8281 gcctaatcta ttcggtggaa caaaaaggct tgcttaaatt aaccagcggc acaactctag
     8341 gcaagactga atggacacaa accgctgaac ccgacaaaat caaaacccct tatctcgatg
     8401 attttgtcgc aaaacaagtg agcttagacc agtctggaaa taaactgaac taccgtctct
     8461 attcgccttt gcaaaaaaat ggtgaaaaat acccgcttgt gattttccta cacggttcag
     8521 ggcaagtcgg ttcggataac cttgctcacc tgctttccag taaaggggcg attgccaccc
     8581 tgccttatgc cccaagtttt gtacttgctc cgcaatacga ccaagtattc gacccatttg
     8641 ataatgccgc caaagggcaa aaaggcggta ttcactggca aacggaaaat cgtatcaatc
     8701 tcgtgttaaa aatgattgat gaaaccctaa aagccaatcc tcaaattgat accacacgca
     8761 tttatatcaa tggcttatct cgaggtgctg aagggggctt aaatctgttg ttggctcgcc
     8821 cgaatttctt tgccggagca ttattaatga gcggtcgtga agcctacacc aacgaatggg
     8881 tggacggcaa tgccaccaaa acgaatttgg cggcaattaa acatataccg atttggtttt
     8941 tccatagtaa agaggacaaa gtctcgccgg taaaaggttc tcgcattaac taccgcattc
     9001 tcaaagatga gttaaatgcc cccaatgtga aatataccga attcactttt gaacaagccg
     9061 gcgacaacgg cattgtcaat aataaccctc ataatacttg ggacgctgtg tataacagcc
     9121 ctgaggtgat tgggtggtta cttcagcaaa aacgccacta aggaggctca ctgtgtttat
     9181 gtatttgtct cacccgttag atcctaaaga tttagcttgg ccgggagaac ctgttgttga
     9241 ggtgactcgc tgcacagacg taggtgaaga aacgccattt agcagtttta tcacgaaact
     9301 accgaatcat tgcggcacac atatggacgc tcctcgccac tttgtgaaag acggtttaag
     9361 tatcaatgaa ttgccgatag agtatttctg ccataaagag gtcgctttaa ttgaaattcc
     9421 caaaggagag gcagaaggga tcaccaaaga agatttattg ccttatgtcg atattctctc
     9481 caaggtgtct tttgcctttt tacgaacggg gtttgagaaa tatagaaccg agaaccctgc
     9541 tatttatcaa aatgaatgcc cctatatttc aaccggtgcc gggcagtatt tatctgatac
     9601 tttcccgaat ttgaaaggag taggcattga tttcttggca ctagggtctc cttcttcccg
     9661 agtgcctgat gcggaaaacc ctaaaaattg ccatcgagcg attttaggct actataccgg
     9721 caggtttacc actgtgattg aagatatgca cttagcggaa ctccctaaaa atgccaacat
     9781 taagcagttt tttaatgcac cgtggcgaat taaagggtta gattccagtc aagtgacttg
     9841 tattgtggaa ttacagcaat aaaccacaga tatattcatt ttaggagagg ctatttacta
     9901 tagtaagcat aactcaatca ttaattgaaa ataattatta tttgatttta atcaagtcat
     9961 tcataactta attttgttat aaatatgacc ttgtttatag cactattttg tttcgataat
    10021 gattataaaa gatacacact ggacatctca acaagcctct ccaaatgctt tcccagaacg
    10081 acaggcactt atgcctattt ggggtgggaa aaatattgaa cgcaatcaat ggcaatcttt
    10141 atggctggaa caagcaccaa atgcgttatt acaggatggt ttagcttatt tccatattcc
    10201 gttttgcgct agtcattgta ttttttgtgg tttttatcgc aatgcttgga aggaaaatta
    10261 tagccagatt tatactgatc gtgtgattag tgaacttcga tatgaatctt cactatggcg
    10321 aggacaaggt aagattcatg ccgtttattt tggtggagga acgccaacag cgttacatac
    10381 agaagattta gtacgattga ttcgagcttg ttatcgttat ttgccactcg ctgaagactg
    10441 tgaatttact attgagggta gaattagcca ttttgatata gataaggcta aggcttgtat
    10501 tgaagcaggc gtgaaccgta tttctattgg tattcagact tttaactccg aaattcgcaa
    10561 acgtttaggg cgcaaacata gtggcgaaga ggctcaaact tatttaaaag ccttatcgga
    10621 attaaatgct gtgattgttg ctgatttaat ttttggcttg ccaaaccaaa cagatgatat
    10681 ctggcaaaac gatattgaaa ttgcgactag tttaccgatc tcaggcttag atatttacgc
    10741 ctttaataat tatcctttcc tgcctattaa tcgcttaatt gaacatggaa aattacctgc
    10801 gcccgcaggg tttgacaccc aaagcttaca ctatgcttat gcagtagaga agttaaaagc
    10861 acaaggttgg cagcaagtga gcaataacca ctttgctttt ccaaatcgag gtgaacgcaa
    10921 tcgctataat actttggtta aatcgaatat gccttgtttg gcatttggct ccggtgcggg
    10981 gggaaatttt ggtgggctga gttaccaagt acaatctgat ttaaagacct acttagattc
    11041 gcctcttgat cagaaaagcc tttctttttt gagtaaacat ggtgaacata aagcactgct
    11101 tggtgtgata caacatagca tggaattggg ttacttagat acaacgcctt ttgaacaaaa
    11161 tgcgaaagct gaaaaattat tgcaacaatg ggaagcgctt gatttactga agcgtgaaaa
    11221 aaatcaagta tatctcaata ccagtggtcg ttactggtca ccaacattaa ttcgtaaact
    11281 aatgttaaca cttcctcaat caagtaagga taacaacatg ataacgccat taactaaaga
    11341 attagaaaat aaattgcgga caaatttaaa agaaaaccca gggcaaattt tagaaatgct
    11401 ggcaggaatg aatcaatgta gcttggaatc ggtaattaac tgtctgccca aagaaatggt
    11461 aatgcaaaca ggtggtgagc gttttgtgga aattatgcag gcaattgctg gttggaatga
    11521 agctgtgact tttattattc atacgcctga tgcgattgca gaggtaactg ctaaattgcc
    11581 acaaggtaaa attgggcgag gtttttataa ttttgaacat ggtgtagatg gaggaattca
    11641 cggtcattta cgctatgaaa attgtgctgc tatttactta cttgatcgcc catttatggg
    11701 aaaaagaacg gtggcgttaa cttttatcaa tcaaagcggt gaggcgatgt ttaagatttt
    11761 tgttgggcgt gatgaacaag gtcaattacg agaaaatcag attcaagcca tgcggaaatt
    11821 aattggagga tgctagtcat gattttggtt tgtggggcaa atgggttgtt aggacgagca
    11881 atctgtgaca aattacctag agagaaaacg atagccgtct tacgaaaaga tgctatggat
    11941 acgtttttca gcgaacgaaa tatagcagta gaaatagcag atttattaga tttggaatcc
    12001 tgcaacgcct tgttacaaaa aacacaaccg gaaatcttga ttacggtagt aggaggaaaa
    12061 aatgaacaag gtattcgtag cgacaaaaca gcaaatatta atttgataaa agcagttgaa
    12121 aaatattcac caactacgaa agtagtttta gttactagtg ttgggtgtgc agaacaatgg
    12181 gatttaatta gcccattagc acagcaagct ttaggtgaag cactaaaagc caagacggaa
    12241 gctgaagctt atttacagca aacagcatta aattggctga ttattcgacc cggtgggtta
    12301 aataatgatg aagtaaatga tgagtatcag attgtgcgtg atttacctaa tgaacggaaa
    12361 atgtatgtaa gccgtaaatc tgtcgcaaca ggcatagtgc gtttactgga tagtacggaa
    12421 aatcatcaaa tcttctctat tattaatagg ggatagtata tttcaacgaa ggcaagcggg
    12481 catattttat ggttattttg caactataaa acagaccgct tgtgagatct ttttctattt
    12541 tattgagaac tggctgccgc attcatctgc aagtagcgaa gcaccttttt ctgggtagct
    12601 tcgtccatat cggtaaaacc gaccattccg ttaaatactg caatccattc gtttgcatca
    12661 tgcattttag gatcacgttg tttatggcac acgctgcatt ctgttttata ggtatttttg
    12721 gtgttcgccc aaaagttagt gagatcttgg gtaaattcgg cattttccac ccacacgttc
    12781 attttcactt tttgccatac caagccggtg ttcggatctt ccttgctctc tacaatctct
    12841 aacagtgggt tgttgctgat aaaagatttc tcaaataccg catcggtaat atttttactg
    12901 aaagaatgat accaaatccg cccgaaacct ttgctttttc gccataaatt cagctcaatt
    12961 tcagcggctt ttgcggttgt ttgcaccaat ttaatttctg ctccggcttc tagctgcccg
    13021 attttctgtg tcaaattttc atcggcaaat aaagggattg tttccgtggt gtaactgttt
    13081 gaaccggcaa aacaaaatgt tggcatgatg aatgccaaga aacagaaagc gattttcgat
    13141 aatgatttca tcataaaccc cacaaattag atgagaaatt aggttatatg ttacacaaat
    13201 tgagcaaaaa agcgttgatt tacatcataa aactgatttt atgtcgattt cttaattttt
    13261 tgcaaaaaaa tcccaaaaaa tgactgctta caagctataa taaccagtat ttttcgacca
    13321 tttttcaaat tcaagagaaa ataaaatgag tacaaaattc aacgtaaaaa cctttcaagg
    13381 aatgatttta gccctgcaag actactgggc aagcaaaggt tgcaccattg tgcagccgtt
    13441 cgatttagaa gtgggggcag gcacctcgca cccaatgacc tgcctgcgtg cgcttggccc
    13501 tgagccaatg gcgtttgcct atgtgcaacc atctcgccgc ccgacagacg gtcgctacgg
    13561 cgaaaatccg aaccgtttac agcactacta ccagttccaa gtggtgatta aaccttcgcc
    13621 ggataacatt caagaacttt acctcgacag cctgaaaatg ctcggtttcg acccaaccca
    13681 aaacgacatt cgttttgtgg aagacaactg ggaaaaccca acgcttgggg cgtggggctt
    13741 aggttgggaa gtgtggctga acggaatgga agtgacccaa ttcacctact tccagcaagt
    13801 cggcggcttg gaatgtaaac cggtgacagg cgaaatcacc tacggcttag agcgtttggc
    13861 gatgtacatt caaggcgtgg acagcgtgta cgacctcgtg tggtctgacg gcgaactcgg
    13921 taaaaccacc tacggcgacg tattccacca aaacgaagtg gagcaatcca cctacaactt
    13981 tgaatacgct gatgtggact tcctgttcca atgcttcgag cagtacgaaa aagaagccca
    14041 atacctgtta ggcctagaaa aaccattgcc attgccggca tacgaacgca ttttaaaagc
    14101 cgctcacagc tttaacttat tagatgctcg taaagcgatc tcggtaactg aacgccaacg
    14161 ctacattcta cgcattcgtg ccttaaccaa aggcgttgct gaagcgtact atgccagccg
    14221 tgaagcgttg gggttcccgg ggtgtaaaaa ataatcgtag ggacgccacg cttggcgtcc
    14281 gtcaataaat tacaaaacgg acacgaagca tcgtgtccct acaaggattt acgatgaaac
    14341 cgattttata cttcgccgat tggtgtccgg ataccgcccc atttgtggca gaactagacc
    14401 gcttgggcat tgaatatgag ccgtgcgaca tcaccaaagg aggctcaaca cttaaaccat
    14461 ttttgaaact gcgagacacg cattctgcct ttgaccacgc caaagccaac ggctatattg
    14521 gcattccggc attgctgatc gaaggcgaaa aagtcgtgct ggatttggct gaattagagg
    14581 gtattttcgg ctaacaagcg gttgaatttg gcggaaatgt tgcaaaggag ccaataatga
    14641 agacagtaat agcagataat tcggctgaat ttgtgaatga aatttcacaa cttattcaat
    14701 cgagtaagca acgaatgacc gttgcggtta atgcagaatt aaccttgctt tattggcata
    14761 tcggaaaacg gatcaatgac tatattttgc agggtgaacg tgcggaatat gggcaagaag
    14821 tggtgaaaaa tcttgctcaa agtctgacgg agcaatttgg taaaggttgg agtaaacgcc
    14881 atttaaatta tacaatgcaa tttgctacaa ctttccctaa tttggaaatt gtgcacgcac
    14941 tgcgtgcaca attaagctgg acacatttta agcagattat tcatattgat gatccaacaa
    15001 agcgagggtt ctatgcaaca atggctgcac aggagcgttg gagtacaagg acattagaag
    15061 atcgcattgg ctcattattg tttgaacgca cggcaatttc caaaaagccc gatgaaacca
    15121 ttattgctga attgagtttg ctacgtgaaa aaggcgaata taatcagtca atggtgttga
    15181 aagatcccta tattttggat tttctcgacc ttaacgaccg ttatatggaa cgtgatctcg
    15241 aagatgcgat tctacgagag atcgaacagt ttttactgga acttggggcg ggttttacct
    15301 ttgtcgcccg ccaaaaaagg attcagattg ataatgatga tttctatatc gatctgctgt
    15361 tttataaccg taaactcaaa cgcctgattg cgattgaact aaaaaccgaa agcttcaaac
    15421 attcccacaa aagtcaaatg gaactctatt tggcgtggct ggcgaaatac gagcaagaag
    15481 cagacgaaaa cccaccgctt ggaatgattc tctgcaccgg taaaaagcag gagcaagtgg
    15541 aattgttgga tttgaaaaat tccgatattc atattgcgga atatatgacc gtgttgccga
    15601 gtaaagcggt attggaacaa cggttgcatt tggcggtgga aagggcgaaa gagcggtttt
    15661 tactaaaata gcaagcggtt aaaatcagcg gaaatgttgc aaaatgaaag tatgatggaa
    15721 acgatttggt tgcatattcc gttggtgggt ggttagagat tttcaaatct cccccctccc
    15781 cctctttggc taaagagggg gcgatcattt agtgagtaat tttaattcat ctgactattt
    15841 acaatcttaa tgaagaaaga tgaattataa atttacgaag atcaaattcc cctttttagc
    15901 aaagaggggc taggggagat ttggcagaag tgaaaacgta gtgagagatt gattagtcta
    15961 gtactttttt gcaagttaat cataaagttg ctctcatttc ttgataagta caataaaagc
    16021 aaagaaaagg atataataaa ggaaatatat gtcaattaaa aaattattat ctacaactat
    16081 agatcaactt gagaatataa tacaagtatc gggcgaaagt ttcgaaaaaa ttacaagtga
    16141 cttagcagaa aaagcaaaag aattaaattc agaatataat attaaatgtg aaaaattggg
    16201 atacgccata acattatttg aaaaaaactc ggaaatagaa aaacgctaca tatcattatt
    16261 atctgacttt gatatggata caagtataaa aggatttgaa aaattgtctc tactaatgaa
    16321 tggcaagaat gataatgcta gaaaagaagc tgaagaacat tttaatgaat tacaaaatgg
    16381 gctattagaa gctcaagatt ataaaaaaga tttagacatc aaaattagga aattagctag
    16441 agagctttat aatgaaaata tagcacaatt agaaatagaa gaaatcaaag aacatttata
    16501 taaaaattgg taatttaaac aatgacaaca caaaacttcc ttgccgagat cggcacagaa
    16561 gagctgccac cgaaggcact caaaaaatta gcgaccgcat ttgcggagaa tgtagaaaac
    16621 gaattaaacc aagcaggtct ttcgtttgag aaagtggaat ggtttgctgc tcctcgccgt
    16681 ttggcggtga aggtgttgag ccttgcggaa agccagccga gtaaagaggt tgagaaacga
    16741 gggccggcgg tgtcggcagc gtttgatgcc gaaggcaagc cgactaaggc agcggaaggc
    16801 tgggcgaagg gctgcgggat taccgtagag caagctgagc gtattgccac cgacaaaggc
    16861 gaatggttgg tgcatcgtgc cgtgattgaa ggtcagccga ctaaaaatct gttggtcgat
    16921 attatcgcca aatcgctggc gaacttgccg attccaaaaa cgatgcgttg gggcgataaa
    16981 accgagcagt tcgtccgccc tgtgcatacc gtgacacttt tattcggggc ggagttgatc
    17041 gaaggtgaga tcttaggcgt gaaaagcggc cgtactattc gtggtcaccg tttcttaggt
    17101 gaacgtgagt tccaaattga gaacgccgat caatatccgc aactgttgaa agatcgtgga
    17161 tctgtggtag cagatttcaa tgagcgtaaa gccttaattc ttgcaaaatc acaggaaaaa
    17221 gcaaccgctt tgggtggcgt tgccgatatt gaagaagatt tgctggacga agtgacctcg
    17281 ttggtggaat acccgaacgt actcaccgcc aagtttgaag agcgtttcct tgctgtgccg
    17341 gcggaagcct tagtttacac catgaaaggc gaccaaaaat acttcccgat ttattcaaaa
    17401 gacggcaaat tgttaccgca ctttattttt gtgtcgaaca tcaatccgga agacccaagc
    17461 aaaatcatcg agggtaacga aaaagtggtt cgcccacgtt tgaccgatgc ggagttcttc
    17521 ttcaaaaccg acttaaaaca gaagttggaa gaccaactgc cacgccttga aaccgtgttg
    17581 ttccagcaac agcttggcac attgcgtgat aaaaccgctc gcattgaagc gttggcaggt
    17641 gaaattgcga agcaaatcgg ggcagatgaa accaaagcga aacgtgcagg tctcctctca
    17701 aaatgtgacc tgatgaccaa tatggtgttt gaatttactg atacccaagg cgtgatgggt
    17761 atgcactatg cccgccacga cggtgaagat gaagaagtgg cggtggcgtt aaacgagcag
    17821 tatatgccac gttttgctgg cgataacttg ccaaattcat tggtggcttg ctcggtggcg
    17881 ttggcggaca aatttgacac gctaacaggg attttcggca ttggtcaagc cccgaaaggc
    17941 agtgccgacc cgttcgccct acgccgtgcg gcacttggct cgttgcggat tattgtggag
    18001 aaaaatttac cgcttgattt aaccgattta gtggcgaaat ctgctcaatt atttggcgat
    18061 aaactcacca acaaagacgt ggttgaggac gtggtggact ttatgctcgg ccgcttccgt
    18121 gcgtggtatg agagcgaagg cattgcggtg gacgtgatcc aagccgttct cgcccgccgt
    18181 ccgaccaagc ctgccgactt cgatgcccgt gtgcgtgccg tgtctcactt ccgcaccctt
    18241 gacagtgccg aagccttagc cgcagcgaat aaacgggtga gtaacattct tgccaaagcc
    18301 gatattgcaa ttggcgacat tgatgtttca gcttgcgtag agccagcaga aaaagcatta
    18361 gccgaggcgg ttattgcgtt gaaagccgaa gttcaaccgc tgattgcaca gggcgactac
    18421 accgctgtgc tggataaatt agcgaacctc cgccaaccgg ttgatgcctt ctttgacgga
    18481 gtaatggtaa atgcagaaga ccaaaaactg cgtcaaaacc gcctcgccat tttaagcacg
    18541 ctacaaggct tgttcctgca agtggcggat atttcgctgt tgcaataaca ataagtttgc
    18601 aataattgca aaattttaat gaaaatagac cgcttgcagt aattgtgatc tgcaagcggt
    18661 cttttttgct tgaaatttta ccaaaggcgg gattatttaa gttttggttt attcaccata
    18721 atctcgatga cttggcggtc tgtgtattgc atactacgag aggcaatgct gcataagtta
    18781 ttaattgaac gatcaatatc gtgttcgaca attccttcgt tgcctgttac ttggctatta
    18841 tccatagaca tcagaatgga tttatagctt gatgttacgc tggtggagac tttcatcgca
    18901 caactgtttg aagcaccatc acagataata ccgctaatat cgccgatcat actactaatt
    18961 gccatactga tattctcaaa tttccctgtg agcagccacg ctatgccggc acagcttccc
    19021 atagccgcgg ttgttacggc acagagtgca gataatttcg gtaacttgct gtgaatataa
    19081 attgccatga ggtgtgataa aaagagtgct ctaatgcgtt gctcatcagt gacatttaaa
    19141 tggcgggcaa cgacaacaat cggcatagtt gctgtaattc cttgattacc tgaacccgaa
    19201 ttgctcatag caggtaaact tgcaccgccc attctagcat cagaggcaga ggtggtttct
    19261 ataacaatgc gattaagcaa atcatcactg attagaccta gaccaatctg tttttgcaat
    19321 gtccttccga tatgtagccc ataatcggca cgtaatcctt cttgtgagag tgcggaattt
    19381 aattgtgctg cttgctcaat aaagcgaatt ttttccaatt cgatttgcat agaaaaatta
    19441 aatatatctt ttgccgaaag tgaagcaaag atctcagtag tattatcgtt attgacggca
    19501 caaggtttgc ttaaaatagt ttgcccgttt ttttcaatgt aaatgacatt ggtatggtgt
    19561 tcagcaatac gaacacatac tcgattcgct tggtgaaata gtgttgcttc agaatataga
    19621 atatgttctg tttcgaaaat agagacagac actttatcgg tatttaacat agctttagct
    19681 tgcttaacct gttctggcgt aatatttttt aatacttcta atccaccatc aggctcccct
    19741 ccgattgctc caatagctgc cgccataggc aatccgacgg ttgcagttcc cggtactgct
    19801 actcccatcc catttttcat caagttaggg gaaacttttg cctcaatacg ttctggtaaa
    19861 tgacctaaat attggcgtgc aatggcggat gcaagggcga gagaaatagg ttctgtacag
    19921 cctaatgcag ggacaacttc atggttgact gcatgtaaaa tggattgtac taatttttcg
    19981 cagtgaatat tcatagataa aaccttatta ctctaaaaat gtgaggaatg gagaaataca
    20041 taataaaatg ccggtaatga taataatatt gagtgctagc cctttatatt tgaataatgc
    20101 aggcacttta tagactaaat aggccggaat caagcaccca actaagccaa aaataggact
    20161 acagattgag gtaaagctta aaaccggtgc atttaataca atcgcactcc aagccagcag
    20221 aatggaaaat aacataatcc ctttctgcac ataattagga ttgatttttt cagccgggaa
    20281 ttttcttaat aataggttca tcacaatgcc ttgagtggct tctctaaaac ctaaatatac
    20341 cccgaaaaag gctgtcataa cggcaaaaat atttaatgca acacctacat aggttgccca
    20401 actaccaggg aaaaattggg ctgcaattgc taatgcggaa acattttgct cgtatgcttt
    20461 gagcgcttct tctctcccca ttgcaagtgt aaaagagaca gcgtaaaaaa aaacggtaat
    20521 aaataagata gcaaatgcaa tattcatcgc tcgtagggct ttatagcgcg caacttcacg
    20581 agactgttct ttagcacggt aagaaattac cattgggctg agagtttgca agaagagtat
    20641 agaggttagg gtgaaaggaa gggtaatgat ggcatctttt ataagtttgc cgaaaggagg
    20701 cattgcaccg atattatgga gttgccacat tccaatcatt gcaagcccta aggcggcaac
    20761 gacaaatagc ttagttaata ccataaatgt agatatttta aacagtagct tttcgcctcg
    20821 agaagataag gcaactaata tacagattag cactaagcca taaaatggat tatcagagag
    20881 tagtgtattg gtaatgccga aggtaagaag ataggaggca ctgtcgtttg taattgcggt
    20941 agaataaaca aacatccaaa tcactaacat aataaaataa agtacaccta aaaagattcc
    21001 ccagtttttg cccaggtagc cactaataac ggtggggtaa tctttgcatt ccggagattc
    21061 tgctaaagta ttaatgaaca gacgctgaaa aaggtacatc gccgggtatc cgataataga
    21121 agaaagtaga aaaacccaca tgcccataag tcctacttgt accggtaaaa agacgatgcc
    21181 tgccccgata gccataccaa tactcataat gatccagccg aagtcggtag aatcaaattt
    21241 tgttgcttgt ttaaattcgg caggcgagag tttttgagta tccatagagt ctccttaaat
    21301 cgtaacagta taattaagtg ttatttttga attctcttaa atgtttataa attgcgtggc
    21361 tggttaggga gagtttttct gccacaatag gtactgcctc ttttagctca aagatgccat
    21421 tttcaaacaa atagaagata atggatttct tatagagttt tgaatgtttg gtagtgtgtt
    21481 gctcaatgtg agtaactgct tttagaaagg tttcttcaat aagttctttt gggtgagtaa
    21541 taaagttttc acttttataa tgaggcggaa taggatcgta attcataaaa gagctaacgg
    21601 ttttatctaa tggtgtcgat aaatttaaat taatacaaaa taatccgata ggtttgccct
    21661 catgcccgat aataatatgc gtggtggact taactaagtt accgttattt aaccgtgaaa
    21721 agtaaaccag ctcagtatta gattgatctt tttggtaaca ttttagtaac tgtaatcctt
    21781 tatctgtaat aggcgaacct atttttcggt tagtatgatg tccgttaatg attttaataa
    21841 cggatttttc ataggcattc aatgaatgaa taaccacctc acagaattct cctaataacc
    21901 ctgctattgc ttcacttaat gagaaataag acagcataat ttctttgtct aaatcatgaa
    21961 gatactctaa tttatctggc ataactttta ctccaatttt tgtgaattat aagaatgagt
    22021 aaattttaaa gtcaattata tttaacttta ttaagagtta aaagtcagta ttttttgacc
    22081 aagatcatat tttgagggaa agatataaga ggacaaacca aataagattt gcctcgattc
    22141 tgactaggaa aagtggcaaa ttcaatctat cttgattaaa ataatgtacg tacttatagg
    22201 aagaaggaaa acacaatgtc agtaaaaacc gaagttttat ttagtaatca ttggaatgtt
    22261 cgagtgagtg atccgggctt tgaaggctcg ccaagccact attttgaaac cgtatattta
    22321 acgctggaag cctttattaa cggcgaaaat gtacattatg aatttactcg taaagtggag
    22381 caagaagtga aaactcatcg cagttttact gatgtgaatg aattgtttga atttctcggc
    22441 gaatatttaa gccctgttgc acttggtaat gttggcgtgc gtatcggtca gttggggcta
    22501 gcctaatctc aaagggcaaa tcttttgccc ttgcaacatt ttcctaaaaa ttaaccgctt
    22561 gttattacgt ttatgaccac ttccaaccct cttttccaac aaacccgccc ctattgggat
    22621 ttcttacgca ttgaaaagca agttagcccg cataccttaa gcaattatca acgccaatta
    22681 atggcggtga gcgagctttt ttcgcaagca ggcattgaaa attgggaaga ggtcgaaagt
    22741 agctcggtgc gttggatgtt aagccaaagc cataagcaag ggttgagtgc gaaaagtatc
    22801 ggcttacgct tggtggcgtt acggcaatgg tttgtctatt tgattaaaat cgggcgaatg
    22861 tcggcaaacc cgactttagg ggtgaaatcg ccgaaagtag gtaagcattt gccgaaaaat
    22921 attgatgcgg agcaggtcgg gcagttgctg gcgattgaga gtgatgagcc gagcgatatt
    22981 cgagatattg cgatgatgga gctgatgtat agttccggct tgcgtttatc ggaattacaa
    23041 gggctggatt taggcgatat ggatttatcg gcacgagaag tacgggtgca aggtaagggt
    23101 agcaaagagc gaattgtgcc gattggctcg caagcgttaa aagcgttaaa tcgctggtta
    23161 gaaatgcgtt tgcaatttaa gccgcaagat aatgcggtgt ttctgaataa gcgaggtggg
    23221 cggttatctc atcgttccat tcagttggca atgaagaaat ggggtgagcg acaagggctg
    23281 gaaagccatc tgcatccaca taaattacgt cactcttttg cgactcatat gttagaggca
    23341 agcggtgatt tgcgagcggt tcaggaatta ttgggtcata gtagcctgtc caccactcaa
    23401 atttatacgc atctggattt ccaacactta gctaaaattt atgactctgc ccacccaaga
    23461 gcaaggcgga agcaggaaga ttaggcattc tccggttcaa gggttttcat tttgcagaag
    23521 aaataccaat attgaattat cactaacact actaacgcaa ttttcccacc gatatggggc
    23581 agtgcaaaga aagcaaatag tgtaaacgga aacgaaatcg ctaaaatcgt gattttttgc
    23641 ttcatcgtca ttgcccgttt ctcatcatat tcttgcagat attttttgta taatttggtt
    23701 tgaataaacc actggcggat tctctccgag cctttagtaa agcagaacag agccaaaagt
    23761 aagaacggtg tggtcggcaa gcccggtaat actgccccga tgatgcctaa accaatacaa
    23821 ataaaaccac agataatata aaggtatttc ataataatta agttattgat aatgaatcgc
    23881 aattatccta aagcaacttt aggctgattt caaccagttt atagcgatgg attcaagcgg
    23941 tggttttatc tgattttctt gcaaatgaaa taaaaaaacc tgctgattgc tcaacaggtt
    24001 taaagactgg cggaggaagt gagattcgaa ctcacggagg gcgttaaccc tcgccggttt
    24061 tcaagaccgg tgcattcaac cgctctgcca ttcctccgtt gaaaacgttg caataataga
    24121 gattattgcg aacatcgtca agtaataaat cttaaaagct gcttattcgt tctttttttc
    24181 agcacaattt attttctaat taaccaaacg ccactttcaa tatggtgggt gtaagggaat
    24241 tggtcaaaaa gagcggcttt ttcaatccga tgggtttggc ttaattgttg taaattctcg
    24301 gcaagggttt ccggattgca agagatatag agaatccgct catacgcttg caccatattt
    24361 aatgtagctt gatctaaccc tgcacgaggt ggatcaacaa aaatggtatt gcattcgtag
    24421 gcgtttaaat caatcccttt taagcgataa aaggctcgca caccgttcat cgcttgggta
    24481 aattcttctg ccgacattcg gataatttgt aggttaacaa tgccattttt ttcaatattg
    24541 tattgagccg attgcactga agattttgag atctcggttg ccagcacttt gcggaagttt
    24601 tccgccaagg caatcgaaaa attgccgttg ccgcagtaaa gctcaagcaa atcgccttca
    24661 ctattttttg tgcaatttct cgcccattcc agcattttaa tattcatttc cgcattcggc
    24721 tgggtaaagc tgttttccac ttggcgatac acataatttt tgccgtgtac cggtagaatt
    24781 tcttccacat aatcgcaatc cagtgcgatt ttttgtttat tggcacgccc gataatttgc
    24841 actttgaaac cttgttgctc taaacggctt tttaaggcgt ttgcctgttc aacccattct
    24901 tcattcaggc ttttgtggta aagcattgag actgcaattt caccgcttaa ggtgcttaaa
    24961 taatcgatct ggaacagctt gcgagtcagt agttcattgc ctttaatttc cgccaataat
    25021 gcggtcatca tatggttaat cagctcactg gcaataggga agctatccac acgataacga
    25081 gctttggttt cagggttgaa cataatgtgg tacagctcgc cttcctcgtg ccacactcga
    25141 aattctgccc gcatacggaa atggcttggc tttgaggcaa atacctcaat cgcaggcggg
    25201 ttaaacggct tgagtaaagc ggtcaaattt tcggtttttt ttgcaagaag atcggaatat
    25261 tgttcgatag gaagagtcat tttttaccac aaatagcaaa tgaaaaaaca aaccacgaat
    25321 tacttcgtgg ttttaaatta gaaattattc agcagcactg aagtcatcgc cggcatcgct
    25381 acctgcattg cctgaaaggg tgtagatgcg ttttgtttta ctagttaatg tgcggtattt
    25441 taaccacgct ttttcaatgt cagtttctgc tacctcttcg cctttcatta ccgcaacgaa
    25501 acgtttttct tcttgagttg ccggcttacg ttcaccactt tctaaagcca agcaagcttg
    25561 accgaattgt tctaaagttt gtgattcacg aatggtgtaa tcgccgtggc gagagaaacc
    25621 acgtggataa tttttatcgt caaaaaagcg gcgcgtaacg ctgaaactgt ctgccataat
    25681 aatgcctcgt tgtttgaaat tagggaaaat aaaatcggca tacattaaac aaaaacagcg
    25741 aataaatcaa tgccttaatg taaaaaagcg gtcaaatttg gcaaattttt tgcaaaaaac
    25801 tctttaagga gaaatattga tccttttaaa atagacaatg cagtctgagg tatatttttt
    25861 atatttgtta aggtatatta cctaaatgta ttgagttttg attaacttta atatttggag
    25921 atatactgtg gccaaccatt ccaaccattc caaccattcc aaccattcca accattccaa
    25981 ccattccaac cattccaacc attccaacca ttccaaccat tccaaccatt ccaaccagtc
    26041 agccaaccaa tatattttta actctgattg gtttactcat aatgttcctt cattagcttc
    26101 tatttttgaa tatgtaaaac ctcggaggat tttagaaatt ggatcatttg aaggtagatc
    26161 atctgtcttt ttcattgaag aagcattgaa atatcaatca caagttgaaa ttcattgtat
    26221 tgatagttgg gaagggggag cagagcatca aggagtttgg gacatgggag aaatagaaca
    26281 acgatttatc cataatgtca ctcttgcgca acagaaattc caaaatgttg tgttatataa
    26341 gcaccgtggc tattctcacc aaaaaatgat tgaacttctc gcaaatggat atataaatta
    26401 ttttgactat atttacatag atggatctca cgaagcgcca gatgtgttgt tcgatgcttt
    26461 acttgcacat cgtttagtga gaaaaggagg cgttattagt tttgatgatt acctttggtc
    26521 accagatgag acaggtaaac agcgtcatta ttagtaaaac ccgctgttga tcactatgtc
    26581 aatacctatc agcagaaagt gcatgtaata caaggtttaa tagcttatca gcaacatatt
    26641 attaaattgg aagattaact tttctagttt agggttattt tgtaaaagtt gaatgaattt
    26701 agtcttcttt ggggtaagta gctatatatt taccccaaag aagaggttaa tctattagct
    26761 ctaggtctca attttatctc gcattaacct aatcaattca gcgatttctt cggttggggc
    26821 aggtgcttgc agcattaccc agcgaaacag ttccgggtcg ctgtaattga gcatttcaac
    26881 gaaagcttgc tgttgggttt cattgagttc attaaaatga ttttggtaaa acggcataat
    26941 cattttgtct aactcacgca taccacgtcg gcacgcccat tctaatttaa agcggttgat
    27001 ttctgtcatt attttacctc tttgatgcgt aactctttcg ggacttcaaa caccacgtct
    27061 tcttcgttgc cgactaaggt ttcaacttcg gttacgccaa gggtttttaa atgcgaaatt
    27121 actgattgca ccaacacttc aggagcggaa gcaccggcgg taataccgat agtttcaata
    27181 ccctccaacc aagttggatc aatatcttgc ggaccatcaa tcagttttga catcacaccc
    27241 attcgagagg cgagttccgc caaacgattt gagttcgagg agttttttga acctaccact
    27301 aacactaatt gtgattgttc tgccagttcc cgcactgcgt gttggcgatt ggtggtagca
    27361 taacaaatat catttttgcg agggccttga attgccggat atttctcttt taacgcctca
    27421 atcacgccaa tggtatcgtc aatggaaagt gtggtttgcg tcataaaagt taattcatcg
    27481 ttgttggaaa ccggcaagtt ggcaatatct tccaccgatt ctaccaaata aatgccacct
    27541 tcttggttat tgtattgtcc cattgtgccg ataacttcag ggtgaccttc gtgaccgatt
    27601 aaaattgctt ttgtcccttt tttactggct cgggcaacct gcatatgcac tttggtcacg
    27661 agtgggcaag tggcatcaaa cacttttaag ccacgatttt tggcttcttg gcgaactact
    27721 tgcgacaccc cgtgggctga gaagatcacg atagcatcgt ccggcacttc gtgtagctcc
    27781 tcaacaaaaa tagccccttt ggctttcaag ccatccacca caaatttgtt atgtaccact
    27841 tcgtggcgaa catagatagg tgcaccgtga atttctaagg ctaattcaac aatcgaaatg
    27901 gctcgatcca cgccggcaca aaaaccgcgt gggtttgcta ataaaatttt catttaatca
    27961 ctcttatttt ttcggttctt ttttggttat aaaggcttct aaaatcagta agcctgcacc
    28021 cacacaaatc gcaatatcgg caatattaaa cacagggtag tgataaatat cccaataaaa
    28081 atgaaggaaa tcaactacat agccgttgta agcacggtca atggcattcc caatcgctcc
    28141 accaataatt aaggcatacg caatattttc taattttttg accgcttgat tcttccaaag
    28201 agccaccact aaagcactgg aaatcactac cgccagccct aaaaagaaat atttttgcca
    28261 gccggaatgg tcggcaagga aactaaaggc agccccgtag tttcgggcgt aagtgaagtt
    28321 aaaaatcggc aaaatattaa tgctttcacc aaattcaaaa tgttgcacta caatgtattt
    28381 tgaccaaagg tcaatgatga ttacaattaa actcacccaa agaaatttta agcctgtttt
    28441 catttaatat ccaaaattta atgtaaaaag agtagatgga aatccccctg caagcggtcg
    28501 tttttgccgg attttttgca aaactaaatc gcttcttcat tttcttcgcc ggtacgaatg
    28561 cggatcaccc gcccgacatc atacacaaaa atcttgccat cgccgatttt gccggtttgg
    28621 gcggtttcca taattgcttc aatgcactgt tcttccaact cgtcgggaat cacgatttcg
    28681 actttcactt tcggtagaaa atcaatcgca tattccgccc cacgataaag ctcggtatgt
    28741 cctttttgtc tgccaaaccc tttgatttcg gtaatactca ttccgctgac acccacatcg
    28801 gttaaggctt cacgcacatc gtctaattta aaaggtttaa taattgcttc tatttttttc
    28861 attttttagc cttaattttc tcgtcttgcc gatttgggtc tgaaactttc gcaaatagct
    28921 gcgtgggttt cgacataaat ttcgcttaaa agttgtaaac agtatggcac ggcactaaaa
    28981 atacctttaa ccaatacttt gccctgttca tctttcacac cttccagcgt ttctttaatt
    29041 gctttcggtt gccccggcag atttaaaatc agactgtcgt ggcgaattac tcccacttgg
    29101 cgagagagaa tggcggttgg cacgaagtga aggctcactt gtcgcatctg ttcgccaaag
    29161 ccgggcattt ctcggtgggc gacagcaagg gtggcatctg gggtgacatc acgttttgcc
    29221 gggccggtgc cgccggtggt taataccaaa tggcaagcgt gagcatcgac taactcgatt
    29281 aaggtttgct caataatggc ttgctcatcg ggaattaagc gggtttccag ctcaaacggc
    29341 tcggttaagg cagattcaag ccacgccctt aattcgggaa tgccttggtc tgaataaacc
    29401 ccctgcgagg ctcggtctga aaccgacacc aagccgattt tcaacttctc tttgctaagt
    29461 ggtttacaag cggtcatttt ttctcacctt tttgcaattc ttgtttttcc gcctcactta
    29521 aattggataa cgccatatta aaactgcgtt ctaccgttac tttgctagga tcttcatcag
    29581 gcagtagttt taacatcatt ccccacgtca ttgccgccat tttgaaatct tctttttcaa
    29641 aggagtggaa cgccaataaa cttaacgcat taaagtttgt gtggtcttgg cggataatct
    29701 cttttaacaa ggtttcaccc tgttttttgt cttcctgtgc ttcggaaaag agcagcagtt
    29761 gggcgtggct gagtttgtaa tctaagttat ccggcttgag ttgagccgct ttgctaaagg
    29821 catcgtgtgc aagctgacca tcatctaacg ccatcccgat ttgaccgagc atataccatt
    29881 ttttgtcgtc attcggatta ctttgtaaat ctacccgtaa tgccatcgca aattggttca
    29941 tttcctcttg tgagagcgga ttggtctctt cggtttttaa acgctcatag aagctgtcta
    30001 atttttggtg agtggtgtct aacattgagt tggagaacca agaaccgaca ttgctgtaaa
    30061 tcgcaaagct gataccgccg acaaataaaa tcaatgccac aaaccacgac ttgccgagcg
    30121 ttaatttttc acttgtggca ctttgtgtgc tgtgtggaat atcatcaagc aagttttttt
    30181 gtagctctaa tttggtttgt tcagggtcat caatcacccc ttcattcgct tcgttttcca
    30241 cttcttttaa gcggtcaaaa tagaaggctt tgtttaagct gtctcgcttg gtgttatcga
    30301 tttgcttgtt ctttttaagt aacggataaa acgccacgcc acatacaatc agtgtaacga
    30361 aaataattgc cagccagaaa ttcatttttc ttccttattg agaatttggt taagacgttc
    30421 ttgctcatct tgagcgagat gagtggtcgg ttttgcagta ttttgctcaa aattgaccgc
    30481 ttgtggtttg tttttctttc tacgcaacac cacccccagc cctaaggcaa ttaaaattaa
    30541 cggcaacagc cataacataa tggttgccgg tgtgagaggc gggtcgtaag tgacgaaatt
    30601 gccgtagcgt tcaatcatat aatccaccac ttcgtctttg cttttgcctt gtttgagcaa
    30661 ttctaaggtt tttgcccgca tatcggtggc aatagtcgca ttggaatcgg cgatattatt
    30721 attttgacac tgcgggcaac gcagttcttg aattaaggca cgatagtccg actcttgttt
    30781 cgggctgtcg aattggtgca gttctaccgg agcagcatta actgttacac ttagaagcat
    30841 tattaggctg agagttttta ttttcataat tttgaatatt gttgatatat ttattaggaa
    30901 tttgatattt gttattttca atttcca
//
LOCUS       DANMCL010000023        29503 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.023, whole genome shotgun sequence.
ACCESSION   DANMCL010000023 DANMCL010000000
VERSION     DANMCL010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 29503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29503
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.023"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            760..3147
                     /locus_tag="PXF40_000936"
     CDS             760..3147
                     /locus_tag="PXF40_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exo-alpha-sialidase"
                     /protein_id="HDL5802298.1"
                     /translation="MEKMMRKINQLIISPYFFLSILSASANSDFWKSDLNFNLTNITK
                     RVGVDNFTTPVAGEPWAGIGPNGEAAGTAPLYYSRIPAMQVTEDNKLVVMFDLRWNRA
                     YDQDRIDPGIAISSDGGHTWTKKTAWSFDRTNHPARRSMDPTLLHNPIDNSLYVMHGT
                     WSMSDQQWYGGRVPHFNSGSWAATIYKSTDGGLNWEKNTEFSKFSNLDVFSKVTKNGK
                     PTLGFLGGVGSGIVMQDGTLVFPIQTAHQNGIATTIMYSKDNGKTWEMPEIDNPVAPN
                     QSSLENMVFELEPGKLVMTGRGNSRWAYSSTDMGKTWELFTPTNGLLPTSSQPTQGSS
                     IYVTLPNGRKVLLISKPDGKNDGWKRGDITLWMLDAKDPSHKHKVHIIRPGSGNAAGA
                     GYSSLAYKEGNLFVAFENDGDISVKNLTEHIAEMEAKAIEWGLPDELTPALDKINALP
                     YLNKAQKETLVEKMRRANDTAIAQSFVINKEMYNLKNNSDELDKLAKNITKALPSQQN
                     IYQRALAYVNKVTNTADTTYLNYNGIMDTYANLYESYLALNTKLDFTRYIQKARKFNE
                     YNTDILYRSFDNFFAHYDTGVKHNNLSLGLNTKLSENLRGGLFFEYSNKNRNSVQIGA
                     RAKYEMDNHQLSGFLRYRGVKHKDMLARNNSVDGYLNYAYRIQLDDKLSISPSVGAYV
                     SRSSRSLIDEDLAINSRTVYASDVGLNIHYKLNDIDAYIRPSIGFVNGDITLSQSNDM
                     TNTYKIKDKSNVYSVTTGLKKRFANGVALGADFKLHRYGSQTTESNFGLNVSYNW"
     gene            complement(3314..3850)
                     /gene="hpt"
                     /locus_tag="PXF40_000937"
     CDS             complement(3314..3850)
                     /gene="hpt"
                     /locus_tag="PXF40_000937"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HDL5802299.1"
                     /translation="MEKHHIETLHSKEEVLNRINELAKEINQHYHQKQCQNLVVVGLL
                     RGSFMFMADLVRKLELPVEVDFLTASSYGSSTESSRDVKILKDLDGEIQGKDVLIVED
                     IIDTGFTLSKVGEILKLREPNSLAICTLLDKPCRREVDVPVKWVGFEIPDEFVVGYGI
                     DYAQKYRHLDYIAKVVIE"
     gene            complement(3889..5238)
                     /gene="pmbA"
                     /locus_tag="PXF40_000938"
     CDS             complement(3889..5238)
                     /gene="pmbA"
                     /locus_tag="PXF40_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HDL5802300.1"
                     /translation="MSITDKQTLLQQEQELRQAVEFALNFAKQAGAEAEVGVTKVAGL
                     SVSSRLEQVENIEFNNDGSLGISVYLGKRKGNASTSDLQPESIQKTVEAALAIAKYTS
                     EDACTGLADKELLAFEAEDLELYHQADISVDQAVELAIEAEHYALNADEKIVNSDGAT
                     FNSHSGVRVYGNTHGMLQSYLSSRYSLSCSVISAYEDQLERDYEYTIFREFDKLQAPK
                     WVGEQAAIKAVDRLNPQRIKTGEMSVIFYNDVATGLVGHLAGAISGGALYRKSSFLLD
                     KLGEQILPEWFAISERPHLLRQLASSAFDSEGVITQNREIITDGVLQTYLMTSYSGRK
                     MGLKSTGHAGGIHNWLVKPNRQGGLNTLLKEMGTGLLVTEMLGSAINSVTGEYSRGAA
                     GFWVENGEIQYPVAEITIAGQLQDMYKNLVAVGDDIEHRSNIQTGSILLEKMMVSGE"
     gene            5337..5867
                     /locus_tag="PXF40_000939"
     CDS             5337..5867
                     /locus_tag="PXF40_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HDL5802301.1"
                     /translation="MAKKRSKNEIDWTDEEEEIIWVSKSEIKRDSEHLKKIGAELIEL
                     TPQNLEKIPLDDDLKEAIRQAQGFKMEARRRQIQFIGKLLRNRDQEPIQEALDKVKNR
                     HNQQQALLHKLELVRNQLIAMGDASLDNLLTEYPQLDRQHLRNLIRGAIKEREANKPA
                     KNYREIYQYLKTEIVE"
     gene            5873..6244
                     /locus_tag="PXF40_000940"
     CDS             5873..6244
                     /locus_tag="PXF40_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HDL5802302.1"
                     /translation="MEYLSTILKAHIGLAYISLILLLTRGFLSSKMVDWRQYKILRIA
                     PHAVDTFLLITGIAAVAIFLAYDFFTLAQFSWLLPKLLFLVLYIVFATKAFKKGQPFS
                     LKFYLLAVVSFLLMMLTATFH"
     gene            6257..6970
                     /locus_tag="PXF40_000941"
     CDS             6257..6970
                     /locus_tag="PXF40_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HDL5802303.1"
                     /translation="MIGPFVNAGAIILGGVLGACLGSHLPERIRTTLPLVFGLCCFGL
                     GMMLTASVKYMSAVALALILGTIIGELIYLENRIGKVAGLARGLIDRLFPPVHSLSQE
                     EFLEKFIALLVLFCVSGTGIFGAIKEGMTGDPSILYIKSILDFFTAMIFAASLGYAIA
                     AIAVPLIIVQGILILLATVIMPLTTANMMADFSATGGLLLFATGFRICGIKNFPVANM
                     LPALLLAMPMSYFWEWLVH"
     gene            6973..7536
                     /locus_tag="PXF40_000942"
     CDS             6973..7536
                     /locus_tag="PXF40_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HDL5802304.1"
                     /translation="MKKRIIVGISGASGFQYGYKVLELLKPFSEIETHLVISKGAELT
                     RTLETDYTREALHDLADQIHSLNNVGASIASGSFKTEGMVIAPCSMRTLAAIANGLSD
                     NLLTRAADVVLKERRKLVLMVREAPLNLAHIDNMRKVTEMGGIIFPPIPAFYQKPTSL
                     DEMVTHSVSHALSLLDIDIPNTPHWGE"
     gene            7599..8039
                     /locus_tag="PXF40_000943"
     CDS             7599..8039
                     /locus_tag="PXF40_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HDL5802305.1"
                     /translation="MHNPIPTHILDFIQTNHVVNIAAHTEQDFWAANCFYAFDQENVR
                     LIILTAKKTRHAGLMLENPHIVGTICGQIEKINEIEGVQFSATAECLEDKQAEKAALQ
                     IYYQKHPLARLKPSDVWVLSFNTIKHTGNKLMFAKKTIWERNII"
     gene            complement(8043..8918)
                     /locus_tag="PXF40_000944"
     CDS             complement(8043..8918)
                     /locus_tag="PXF40_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802306.1"
                     /translation="MMKTILIDEANQIKGFSHLYRLRSDLMLKYTEISVTETVEQEPA
                     EFEAGLRLVILLSGRSEIDFNSEVFELDASLKPQAAFLPLNRAEMGRKIFRKGQLQKE
                     LVIFLYPKWLIESQLNLASYHHFKQHLKAHQIILTQSMLKLIHDIVSEQEMQPFGLLE
                     KEGNLLALLASAFSQLTQAPRLKKDRVQQLTELLESGKFDGWSLKQIAIYFHTNVTTL
                     QNEFQHYHKTSIFAYLRRSKLEQAYKLLLQGQSITQAAEFAGYANSENFSTAFKRTFG
                     ITPSQIKRDKAKGII"
     gene            9024..11099
                     /locus_tag="PXF40_000945"
                     /pseudo
     CDS             9024..11099
                     /locus_tag="PXF40_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
     gene            11143..12579
                     /locus_tag="PXF40_000946"
     CDS             11143..12579
                     /locus_tag="PXF40_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3327 domain-containing protein"
                     /protein_id="HDL5802307.1"
                     /translation="MKKTTACILTFLVSSVLYANNITIELKQNDFVQGKLIQKAQQPL
                     SLSIIFPDQSSRLLAQNVFGEQDFMFKSELIGTATFSILANGATVSDQDFTLTIERHI
                     PISAQIAPPKVIENTQLEELSQKIAKNPEKQTALINDFWDKAKQAGTPLIEPLDEQQS
                     RVTFLWRGATKNARIWGGVSTEHDFMQRFGETDIWYKSYIVPNDTLVEYKLAPDVPTL
                     PVDENTQRRALLATAQADPLNKTAYFEKIGQNIHNTDKFNYASLLKLPNAPTQSFLTE
                     APNIAKGKLQQLIFESATLGNKHRLFVYLPDGFSAEKNYAVLYLFDGVEYTERVPTKT
                     ILDNMIAQKVILPTVAVFIENPSSESRRVELPANPIFTQVLAKELVPFVEKQLNIKTK
                     ERIIGGSSYGGLSSAYTVLNYPNVFSKALILSGSFWWQPKGTPSEQSHYIAQQFIQKE
                     KLPLCFFISAGFYESGKSAICKRSNYFA"
     gene            complement(12721..12900)
                     /locus_tag="PXF40_000947"
                     /pseudo
     CDS             complement(12721..12900)
                     /locus_tag="PXF40_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011625997.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(12984..13523)
                     /locus_tag="PXF40_000948"
     CDS             complement(12984..13523)
                     /locus_tag="PXF40_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5802308.1"
                     /translation="MLDSLKEVNQKLDKKADKVGGGTKEDALVTLDTLIASGTVKAET
                     AMSLLPTLQKGAVATGASSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGSFEL
                     AYMASWLPQQMAAAKQAGLSSIEGFERLLIANQQARVTAGTSDEAGNNLVNLLGKITA
                     KETNERFKNIEYKSVEDQT"
     gene            13622..13873
                     /locus_tag="PXF40_000949"
     CDS             13622..13873
                     /locus_tag="PXF40_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802309.1"
                     /translation="MAPTISDGDQMLVDFSKKEARGDDKIYLVQNGESVWVKRVRKVW
                     DYVELISDNESYRPIRITADEAQNLQIIGQVVHIGHSLV"
     gene            complement(14069..14269)
                     /locus_tag="PXF40_000950"
     CDS             complement(14069..14269)
                     /locus_tag="PXF40_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5802310.1"
                     /translation="MQYVLDLTGYACPLPLLMAKKAMNDLKKGDSLEILLNQQSSLTD
                     FELLAKEQGWLCELQAVENVGY"
     gene            complement(14328..14840)
                     /locus_tag="PXF40_000951"
     CDS             complement(14328..14840)
                     /locus_tag="PXF40_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HDL5802311.1"
                     /translation="MQQLEPQTFASWAEPIDMLYACHSKVKSFCKQLQILPDYLEKNG
                     VNQAVKNDVQQILNYFNISAPLHHEDEEDDFFPELIKVQPQAQAEVDELERQHVHLHK
                     NWDYLSAQLEDLLAGKRENVDRDLIERFVAGYDVHIAIEEPLFELGREHLAQDKLSAM
                     GKVMADRRKL"
     gene            complement(14853..16007)
                     /gene="tgt"
                     /locus_tag="PXF40_000952"
     CDS             complement(14853..16007)
                     /gene="tgt"
                     /locus_tag="PXF40_000952"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HDL5802312.1"
                     /translation="MKYELKTTSGNARRGRLTFNRPKGEFHVETPAFMPVGTYGTVKG
                     MTPEEVKATGAQILLGNTFHLWLRPGQEVMKMHGDLHDFMQWHGPILTDSGGFQVFSL
                     GKLRKIKEEGVTFQNPISGEKIFLSPEKSMEIQYDLGSDIVMIFDECTPYPATFDYAK
                     KSMEMSLRWAKRSRDRFDELENPNALFGIIQGGIYEELRKVSVEKLVEIGFDGYAVGG
                     LAVGEPKEDMHRILEYVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNA
                     RNGHLFVTNGIVKIRNAKYRADTTPLDPECDCYTCKNYTKAYLYHLDKCGEILGARLN
                     TIHNLRYYQRLMAEIRQAIEEDRFDDFVVEFYARIGKEVPPLQSEVKEQK"
     gene            complement(16066..16206)
                     /locus_tag="PXF40_000953"
     CDS             complement(16066..16206)
                     /locus_tag="PXF40_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802313.1"
                     /translation="MKKLLLCVGILVLAACSSTGVGGSIGAGGGSNGVGIGLGVGTDF
                     RF"
     gene            16300..16872
                     /locus_tag="PXF40_000954"
     CDS             16300..16872
                     /locus_tag="PXF40_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1439 domain-containing protein"
                     /protein_id="HDL5802314.1"
                     /translation="MKILRKFAAVCVVSMAMLSANANLLTISEQEINDYLATKLAEKI
                     PLKDKVGIPKLFELDYRLHSLTSQIGRTEEKKVAISGVVDGLLNAKGKKYAASIHLNM
                     DTTPYYDPQKGALFLKDVRLLSWSATPAKYQAELQMFLPVLADGLSSFLNSTPVYTLD
                     ENKTKEAMVKKFGKAIVVENGNIKLETTIF"
     gene            16974..17192
                     /gene="cspD"
                     /locus_tag="PXF40_000955"
     CDS             16974..17192
                     /gene="cspD"
                     /locus_tag="PXF40_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein CspD"
                     /protein_id="HDL5802315.1"
                     /translation="MDIGIVKWFNNVKGFGFITSDVCEGDIFAHFSEIQAEGYRSLKV
                     GQKVQFELVQGERGASASNITPISEKTL"
     gene            17282..18196
                     /locus_tag="PXF40_000956"
     CDS             17282..18196
                     /locus_tag="PXF40_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5802316.1"
                     /translation="MPSSYQLVLINLLYIFGIGLNIVLLRFLSLHFDPLNNNGIRFLV
                     GGFTLLFFILWRFRTSLSQLIKTPKLIAISLFVGLMMSANMYFWLKGVKITNAVTVSI
                     FGVLAMPFGVIIAAIFFQDERERIKSKAFWFGSILTIIGSLGFIWHGKTLSIGEGFIL
                     GSVFLFLSIIIRNIQNLVVKFARELNVLTLSCVTSLTTSLSSLLLSQQAGKFNELFTA
                     PNWLLFSLMVAGIYAIMIGMVLTFHIIQTQGLITYQVLELLMPVSTAIIAYILLDERI
                     SIVQMGFACIVILGSSIALKLVKYPKHY"
     gene            18315..19175
                     /gene="araC"
                     /locus_tag="PXF40_000957"
     CDS             18315..19175
                     /gene="araC"
                     /locus_tag="PXF40_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HDL5802317.1"
                     /translation="MYKNLSLLSPTYPFDLEFIAGLTQCEKGNYLDSIVDRQQGMHGY
                     MLQLTTFGRGSVFDGKHVFTAHRGQLLLFTPNAVQHYHRHPESQYWHYKWVYFQPNPK
                     WNKWLNWSDMEEKIGRITISDDRYFQEISQLFSKIELELKSSKFFKEDIATSLLEYLL
                     MKCISAEKIEVIPVIDQRILTVCDLILTNLAKNESLEAMAEKVFLSPSRLSHLFKQSL
                     GISLVQWRELQRISESKKLLYFSNISISNIAKSLGYEDSLYFSKIFKKHTGLSPSEFR
                     TLERRKDSEM"
     gene            19362..20336
                     /locus_tag="PXF40_000958"
     CDS             19362..20336
                     /locus_tag="PXF40_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5802318.1"
                     /translation="MKKPTFKHALFSSILALACYGSAFANDVVNISKIDGMPWFNRMA
                     EGVVQAGKDNNINAYQVGPSNTDAPQQVKLIEDLIAKKVSAISIVPNDANALEPVLKK
                     AKQNGIVVLTNESVGQPSADWDIEIIDNAQFAADYVEEVAKAMGGKGGYVIYVGGLTV
                     PQHNLWADLFVKYQKEHYPDMFEVTSRMPVAENINDARRTTIDLVKAHSDLKAVVSFG
                     SQGPIGAGLAVKEKRLKNKLNVFGMMIPSQAANLIKSGDITMGITYDPANAGYALAAV
                     AAKVLKGEKIEDGLEIPTVGKAKVDSEKKLLQFHNVLKVTKENIDKLY"
     gene            20391..21881
                     /locus_tag="PXF40_000959"
     CDS             20391..21881
                     /locus_tag="PXF40_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5802319.1"
                     /translation="MAFISMRHISKTFHGIKALNQVNLSLDYGEALCLAGQNGCGKST
                     LIKILSGVYQPDKGAEIQIGATQYTKLTPQESIDKGIQVIYQDLALFPNLTVAENIAI
                     NLHRKFGWVSQDHIHQVALTAIQSINANLDLNAILEDLPIAQQQLVAICRALAQNARL
                     LIMDEPTASLTAKEVKDLLDVVIKLKSKGISIIFVSHKLQEVMSVSDSVLVLKDGNMV
                     GQYPIREMNEKRLGFLMTGLEIDYKRLDLPDFLQRKTVLEVRNLTLPHQYQEINFSLR
                     EGEIVALTGLLGSGRTELCLSLFGITQPQSGDILLNGEKVIFNTNRDAIAKGIAYVSE
                     DRMHTGLIMAESIHHNIISTIFHKITDKLQIIQSSKAYASSQALIDSLKIKVSDSDLP
                     VNTLSGGNAQRVSIAKWLAIDPKIIILDAPTIGVDIANKEGIFQIIKSLAQQGIAVIF
                     VTDEVEETYYNSHRVIVMKKGRIVDEILPAYSSEKSIAEVIYENQQ"
     gene            21865..22824
                     /locus_tag="PXF40_000960"
     CDS             21865..22824
                     /locus_tag="PXF40_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802320.1"
                     /translation="MKISNNHILSSTLLILILLLTLFTRDFATIENLYDVVNNYAMLM
                     ILACGLFVVLLSGGIDISFPAITIISQYVMVTLIGKYDVGFAGVFVISSTIGILLGFI
                     NALFVNRLSVPSIIITISTLNIFYGGLLYFTKGVWLYEYPEWFTQEIVFFKQITAEGV
                     EFGLSFQALMAILAVILTGLITNKLTIGRKIYALGGNPDATSRIGFNLLFLHLFAYGY
                     MGFMAGLAGIVQSYTVQSVAPDSLLGYELTVLAAVVLGGASLSGGRGTLLGTVMGVML
                     LAIIQNGLNLMNVSSYWQTIITGIIIILSISATALSQRKKQGA"
     gene            22827..23777
                     /locus_tag="PXF40_000961"
     CDS             22827..23777
                     /locus_tag="PXF40_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802321.1"
                     /translation="MKSKLDPTIFYLLALFAVAVIAFSIFIPDIFWSVSNFQSMASQI
                     PVLGILTLAMALPMLTGGINLSIIAGMNACSLIIAYFITQYTGISWLFIAILLSLCCA
                     LAIGLLNGTLIAIIRVSPILATLGTMTLINGINILVTNGSTIANFPETMLSINASAFL
                     WIPLPILIFLFLAGLIWFFLEKTAMGKAVYFIGNNEKATYYSGINTKKVLIWVYVISS
                     ILCVFAAILMMSKLNSAKASYGDSYLLISILAAVLGGINPDGGKGKLLGIMLALVLLQ
                     VIESGLNMLGISSYITMILWGSLLLFFIFLQKNRLFRLTQ"
     gene            23790..25385
                     /locus_tag="PXF40_000962"
     CDS             23790..25385
                     /locus_tag="PXF40_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HDL5802322.1"
                     /translation="MQNEKQLIEQGNTVIGIELGSTRIKAVLISSDGTILATGGADWE
                     NRLIDGIWTYHQNEIWEKLQAAYMDLSKTVKEKYHTTIRTAKALGISAMMHGYLPFDK
                     HGNPLVAFRTWRNNITLTSSEKLTALFQYPIPQRWSIAHLHQALLNQEPHLPEIDYLT
                     TLSGYVHWQLTDHKVLGIGDASGMFPIDTELKSYNPTMLAQFDRAIADYRMPWKLEAI
                     LPQVRVAGEQAGKLTEKGAKLLDPTDNLQAGIPLCPPEGDAGTGMIATNCIKEKTGNI
                     SAGTSAFAMIVLEKALSKAYSELDIVTTPAGKLVAMAHANNCTSDINAWVNLFGECLS
                     VFGVNICTEELYEMLFLHALQGDADCGGLLSYGFHSGEHNVGLSEGCPVFLHPTNAHF
                     NLANFMRTHLYTAFGAMKLGMDILINQEKVEISRILGHGGIFKTEGVAQKILSSALNI
                     PLATASTASNGGAWGIALLADFLSVSDRYSLEEYLDNCIFNTTKLNLVQPDKTMSEGY
                     ERFMQRYKQGIPVVEKALFLNTD"
     gene            25615..26817
                     /gene="yedE"
                     /locus_tag="PXF40_000963"
                     /pseudo
     CDS             25615..26817
                     /gene="yedE"
                     /locus_tag="PXF40_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005824242.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
     gene            26853..27122
                     /gene="yedF"
                     /locus_tag="PXF40_000964"
     CDS             26853..27122
                     /gene="yedF"
                     /locus_tag="PXF40_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007241376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HDL5802323.1"
                     /translation="MAFTVVQKLDKDPKDITPDYTLDTLGEPCPYPAITMLETMPQLQ
                     KGEILELLSDCSQSINNIPIDTKNHGYTLLSVEQNGTKLRYLIQR"
     gene            27222..27566
                     /locus_tag="PXF40_000965"
     CDS             27222..27566
                     /locus_tag="PXF40_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HDL5802324.1"
                     /translation="MNKYALLAIFWFIIGIYALLFRESTNDIPPFPHFDKVSHFALFF
                     IQIWLSANAFIRSKKGIPYFGLIIFALLYAFTSEWAQATFTSTREGSWLDGLADMLGA
                     SLSLLLVKYCKK"
     gene            complement(27629..28576)
                     /locus_tag="PXF40_000966"
     CDS             complement(27629..28576)
                     /locus_tag="PXF40_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HDL5802325.1"
                     /translation="MNRITQILNIKHPIVQAPMSWLTDAHLVASVAEAGGLGFLAPHA
                     GQTTNPTSNEEVLDRMRNEIRKVKALTDKPFGVPFILSYDFSLIPLMVDLFIEERVPV
                     VLDNGWLDPEIYAKFKAAGIKIICRLPNPNLADALKAQALGADILVLTGFDEGGTLPM
                     KEVGSFNVLAEFVGKVDLPIMLAGGIADKKAVQAALTLGAEGVWIGTAFIATEECRAS
                     EKVKNWIVEANANDLLLFRTEPHYYRSLPTGLAKKCFEMSENGATRSEIAKVMNAGTG
                     MRLGMLEGDFDNGYVSVGNGISQINKIKSVKELIDELMA"
     gene            28759..>29503
                     /locus_tag="PXF40_000967"
     CDS             28759..>29503
                     /locus_tag="PXF40_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802326.1"
                     /translation="MSIRWENIKPLQGSQNSAFEELVCQLARQEFKSQGKFTRISAPD
                     GGIEAMCELPDGSVCGWQAKYFLSSFSSSQWQQIEDSFKESLKNYPKLTKYYVCVATD
                     RANANVSGKKSFLTKWEEYTQRWKDFAQSQGREIEFEFWGSFELSDLLSKPENAGKKF
                     FWFNESELSDKWFEQYNQQAINNLGVRYTPEINVDLPIAMQLESLARTQIFKKHLSDE
                     FHKLLVEIKSQYKSLYRYEALENHFEPVYE"
BASE COUNT         8896 a         5901 c         5594 g         9112 t
ORIGIN      
        1 acttcccact ggctataaag ccttatatat caaggcttct agcaaatcag tgggtaaagt
       61 gggtaaaatt tcaaaaagtt ttaaattttt tcttttattc aaaaataaaa tttcccaaga
      121 actaattttt agctacggcg atagctcgaa atatctgttt ataaaataac ctaattaata
      181 aggcactttg gattttagtt atatcctgaa aaatcaaatt ataaagaaac cttatctatc
      241 aatacttgaa gccattaagt tcaagtctcg accaggcacc atttgactaa atttagttca
      301 acagagctaa acgaaaaaac cttagaaagc ctgtaaaatc aacgtttaca ggcttttttg
      361 ttgttttagc tcaatggcac taaacatttc atatcgcaaa ttttaagtag cctagcaaat
      421 tttccgccaa atatgaccgc ttgtaatgcc gttaggttat tgcctggcgg cctttttgtt
      481 acagctctta tattttttac accaaagttc agaaaaagtc acttttatca ctaacattaa
      541 gatgaaacct tgatacaaag cttgggcttc ggtgatattt aaaaaatatc acttttttca
      601 ataattgtga caaatctctc agattttttt atttttttgt gcttaaatct taagcataaa
      661 atgccgttat aattacttgc tatccggtat tttatacata agattgaacc atataatagc
      721 tgttcagcta aaaattagtc tttgcacttt atccccctaa tggagaaaat gatgagaaaa
      781 atcaatcagt taatcatatc cccatacttt ttcctaagta ttttatctgc ttccgctaac
      841 tctgattttt ggaaaagcga ccttaatttt aatctcacaa atattaccaa gcgtgtcgga
      901 gtcgataact ttaccactcc agtagctggc gagccttggg ctggtattgg tccaaatggt
      961 gaagctgcag gtactgcgcc attatattat agccgtattc cagctatgca agttaccgaa
     1021 gataacaaat tagttgttat gtttgattta cgctggaatc gtgcgtatga ccaagatcgt
     1081 attgatcctg gtattgcgat ttcttccgat ggtggccata cttggacgaa gaaaaccgct
     1141 tggtcttttg atagaactaa tcacccagca cgccgttcaa tggatccaac gctattacat
     1201 aatcctattg ataatagttt atatgtaatg cacggaactt ggtctatgtc ggatcaacaa
     1261 tggtatggtg ggcgtgttcc tcactttaat agtggcagct gggcagctac catttataaa
     1321 tctactgatg gtggtttaaa ttgggagaaa aatactgagt ttagtaaatt cagcaattta
     1381 gacgtatttt ctaaagtcac caaaaatgga aaacctacct taggcttttt aggcggggtc
     1441 ggatctggaa ttgtaatgca agatggtacg ttggttttcc caattcaaac cgcacatcaa
     1501 aatggtattg cgaccactat tatgtattct aaggataatg ggaaaacttg ggaaatgcca
     1561 gaaattgaca acccagttgc accgaaccaa agttctttag aaaatatggt gtttgaactc
     1621 gaaccgggta agctagtgat gactggacga ggaaacagtc gctgggcata ctcttctact
     1681 gatatgggta agacctggga attatttact ccaactaatg gattattacc aactagctca
     1741 caaccaactc aaggctcttc tatctatgta acactaccaa atggtcgaaa agtgctacta
     1801 atctctaaac cagatggaaa gaatgatggg tggaaaaggg gtgatattac actttggatg
     1861 ctagatgcaa aagatccatc gcacaaacac aaggtgcata ttattcgtcc aggttcaggt
     1921 aatgccgctg gtgctggtta ttcctcttta gcctataaag aagggaattt atttgttgct
     1981 tttgaaaacg atggtgatat ttcagtaaaa aatttaactg aacatattgc tgaaatggaa
     2041 gcaaaagcta tcgaatgggg attaccagat gaacttactc ctgctttgga taaaatcaat
     2101 gcactgcctt atctcaataa agctcaaaaa gagacgctag tcgaaaaaat gcgtcgtgct
     2161 aatgatactg cgattgcaca atcttttgtg attaacaaag aaatgtataa tctgaaaaac
     2221 aatagtgatg agctggataa attggcaaaa aatattacta aagcactgcc gtctcaacag
     2281 aatatttatc aaagagcctt agcctatgtg aataaagtca ccaatacagc ggataccact
     2341 tatttaaatt ataatggtat tatggatacc tatgctaatt tatatgaaag ctatttggct
     2401 ttaaatacta aattagactt cactcgctac atccaaaaag cgagaaagtt caatgaatat
     2461 aacactgata ttttatatcg tagctttgat aatttctttg cccattacga cacaggtgta
     2521 aaacacaata atctatcctt aggcttgaat acaaaattaa gtgagaattt acgtggtggc
     2581 ttattctttg aatacagtaa taaaaatcgt aatagcgtac aaattggtgc aagagctaaa
     2641 tatgaaatgg ataatcacca actttctggc ttcttacgct atcgtggcgt aaaacataaa
     2701 gatatgctag cacgtaataa cagtgttgat ggctacctaa attatgctta tcgtattcaa
     2761 ttagatgata aattaagcat tagcccatca gttggtgctt acgtttcacg ttcttctcgc
     2821 tcattaatag atgaagatct tgcgattaat agccgcacgg tctatgcaag tgatgtagga
     2881 ttgaatatcc attataagct aaatgatatt gatgcttata ttcgtccaag tataggcttt
     2941 gtcaatggtg atataacttt atctcaatct aatgatatga caaacacata caaaataaag
     3001 gataaaagta acgtgtattc tgtcacgaca gggttgaaaa aacgctttgc aaatggtgtg
     3061 gcattagggg ctgatttcaa attacatcgt tatggttctc aaactactga aagtaatttc
     3121 ggtctaaatg taagttataa ctggtaatac cgtaaactga ttacgattta aaagttagac
     3181 tagcccaaga ctgagttcta tattccatag agctcagtct tttaattttt ctttctcgat
     3241 aagaatattt tatatttcaa ccttaatcga gaatgtaatt agtcgtgaaa atctaagtag
     3301 tgattgagtt tttttattca atcactactt tagcaatata atctaaatga cgatattttt
     3361 gggcataatc aatcccataa cccaccacaa attcatcggg gatctcaaat cccacccatt
     3421 ttacgggcac atcaacttcg cggcggcaag gtttatctaa taaagtacaa atagcaagtg
     3481 aatttggctc acgtaacttg agaatctccc ctaccttgct taaggtgaag ccagtatcaa
     3541 taatatcttc tacaatcaat acatctttac cttgaatttc gccatctaaa tcttttagaa
     3601 ttttgacatc acggctggat tccgtgctgc tgccatagct tgatgcggtt agaaaatcca
     3661 cttctacagg taactctagc tttcttacta aatctgccat aaacataaac gagcctcgca
     3721 ataaaccaac cactacaagg ttttggcact gtttttggtg atagtgttga ttgatttctt
     3781 ttgctaattc attgattcgg tttaatactt cttcttttga atgtagcgtt tcgatatgat
     3841 gtttttccat tgatttctcc aaataaaatt gattacaagc ggccgttttt actcgcctga
     3901 aaccatcatt ttttctaata agattgaacc tgtttggata tttgagcggt gttcaatatc
     3961 atcgcctacc gccactaaat ttttatacat atcttgcagt tgccctgcaa tggtaatttc
     4021 cgctacaggg tattgaattt caccgttttc tacccaaaat cctgctgcac ctcgagagta
     4081 ttcccctgtt acgctattaa tcgcagaacc tagcatttcc gttactaata atcctgttcc
     4141 catttcctta agtaacgtat ttaaaccacc ttgacgattt ggtttaacta accagttatg
     4201 aataccacct gcgtgtcctg tactttttaa ccccatttta cgccctgaat agctagtcat
     4261 taaatacgtt tgtagcacgc catcagtaat aatttcacgg ttttgggtaa ttacaccttc
     4321 actatcaaac gcagaagagg ctaattgacg caacaaatgc ggacgctctg aaatcgcaaa
     4381 ccattcaggc agaatctgtt cgcctaattt atctaataag aaacttgatt tgcggtataa
     4441 tgcaccgcca ctaatagctc cggccaaatg ccccactaaa ccggttgcca catcgttata
     4501 gaaaatcaca gacatttcgc cggtcttaat tcgttgcgga ttcaatctat ctaccgcttt
     4561 aattgcagct tgctccccta cccatttcgg tgcttgtaat ttatcaaact cacggaaaat
     4621 ggtgtattca taatcacgct caagctgatc ttcataagct gaaatcacgc tacaagagag
     4681 tgaatatcgg ctcgacaggt aactctgcaa cattccgtgc gtattgccat aaacacgcac
     4741 gccactgtga gaattgaaag ttgccccgtc actattcaca attttttcgt ctgcatttaa
     4801 ggcataatgc tccgcttcaa tcgccaattc gactgcttga tcaactgaaa tatccgcttg
     4861 gtggtacaat tccaaatctt ctgcctcaaa ggcaagcaat tctttatcag caagcccggt
     4921 acaagcatct tctgaggtat attttgcaat cgcaagagct gcttcaaccg ttttttgaat
     4981 cgactctggc tgaagatcgg aggtggaagc attacctttg cgtttgccta aataaaccga
     5041 aataccgaga gaaccatcgt tattgaactc gatgttttca acttgctcta aacggcttga
     5101 aaccgaaagc ccggcaactt tagtcacgcc tacttccgcc tctgccccag cctgttttgc
     5161 aaaatttaag gcaaattcga ccgcttgtcg tagctcctgt tcttgttgta acaaggtttg
     5221 tttatctgta attgacattt tgttccattg attgattgca ttgatgaata tattctaact
     5281 caaatttctg ttagaatacg gcatttttta gagtttatgt aatgaaagga taaagaatgg
     5341 ctaaaaaacg gagcaaaaac gaaattgact ggacagatga ggaagaagaa atcatctggg
     5401 tcagcaaaag tgagataaaa cgagattctg aacacttaaa aaaaattggg gctgaattga
     5461 tcgaattgac cccacaaaat ttggaaaaaa ttccactaga cgatgattta aaagaggcaa
     5521 ttcgccaagc tcaaggcttt aaaatggagg ctcgccgccg tcaaattcaa tttatcggca
     5581 aattattacg caaccgtgac caggagccga ttcaagaagc cttagataaa gtgaaaaatc
     5641 gccataatca gcaacaagcc ctattacata aattggaatt agtgcgtaat caactgattg
     5701 caatgggcga tgcatcatta gataatttat tgacggaata tcctcaatta gaccgccaac
     5761 atttgcgtaa tttaattcgt ggggcaatta aagagcgtga agccaataaa ccggcaaaaa
     5821 attaccgtga aatttatcaa tatttaaaaa ctgaaatcgt ggagtgatta ttatggagta
     5881 cctatcaacc attcttaaag ctcatatcgg cttagcttat attagtttaa ttttattatt
     5941 aacccgtgga tttttatcgt caaagatggt ggattggcga caatataaaa ttttgcgcat
     6001 tgccccacac gcagttgata ccttcttact tatcaccggt attgctgctg tcgctatttt
     6061 cttagcttat gattttttca ccttagcaca attcagttgg ttgctaccaa agttactctt
     6121 cttagtactt tatattgtat ttgcgacaaa agcgttcaaa aaaggacaac cgttttcgct
     6181 caaattttat ctgttagccg tagtctcatt cttattaatg atgctaactg ccacttttca
     6241 ctaaataagg gaaactatga tcgggccttt tgtgaatgcc ggtgcaatta ttttaggggg
     6301 cgtgctgggt gcttgtttag ggagtcacct gcctgaacgt attcgcacta cgttgccgct
     6361 ggtattcggc ttatgctgtt tcggcttagg tatgatgctg actgcctcag taaaatatat
     6421 gtctgcggtt gccttagcat tgattttagg cacgatcatc ggtgaactga tttatttaga
     6481 aaacagaatc ggtaaagttg ccggtttagc tcgtggttta attgaccgcc tattcccacc
     6541 ggtgcatagt ctttcccaag aagagttttt agagaaattt attgctctgc ttgtactgtt
     6601 ttgtgtgagc ggtaccggca tttttggtgc aataaaggaa ggaatgacag gcgatccaag
     6661 tattctttac attaaatcga ttctagattt cttcaccgca atgattttcg ctgcttcgtt
     6721 aggctatgcc attgcggcga ttgcagtgcc gttgattatt gtgcaaggga ttttaattct
     6781 actggcaacc gtgattatgc ctttaaccac tgccaatatg atggcagatt tctccgcaac
     6841 cggcggttta ctgctatttg caaccggctt tcgcatttgt ggaattaaaa actttccggt
     6901 cgcaaatatg ctaccagcac tactccttgc gatgccgatg tcttatttct gggaatggtt
     6961 ggtacattaa tgatgaaaaa acgtattatt gtcggcatta gtggggcaag tggttttcaa
     7021 tatggctata aagtgcttga actgctgaaa ccgttttcag aaattgaaac ccaccttgta
     7081 atcagcaaag gagctgaact cactcgtact ctcgaaacgg attatacccg agaagctctt
     7141 catgatttag ctgatcaaat acattcgcta aacaatgtcg gagcaagcat tgccagtggt
     7201 tcatttaaaa ccgaaggtat ggtcatcgcc ccgtgttcta tgcgaaccct tgccgctatt
     7261 gccaacggtt tgagcgataa tttgctgacc cgtgcggcag atgtggtgtt gaaagaacgg
     7321 cgtaaattgg tattaatggt gagagaagct ccgctcaacc ttgctcatat tgacaatatg
     7381 cgaaaagtca cagaaatggg cggcattatt ttcccaccca ttccggcgtt ttaccaaaag
     7441 ccaaccagcc ttgacgagat ggtcacccac agcgtaagcc atgccctttc cctgttggat
     7501 attgacattc caaatacccc acattgggga gaataattcg gcttatcttt tgctttttga
     7561 aatgctagaa tacctgataa aaactatcag gtatttttat gcacaatcca atcccgaccc
     7621 atattttaga tttcattcaa actaaccacg ttgtcaatat tgcagctcat accgaacagg
     7681 atttttgggc agcaaattgc ttttatgcct ttgaccaaga aaatgttcgc ttgattatct
     7741 taaccgccaa gaaaaccaga cacgctggct tgatgcttga aaacccacat attgtcggca
     7801 caatttgtgg gcaaattgag aagatcaacg aaattgaagg tgtccaattc tccgctaccg
     7861 ccgaatgttt agaagataaa caagccgaaa aagccgcttt gcaaatttat taccaaaaac
     7921 acccgcttgc acggcttaag cctagcgatg tttgggtgtt atcattcaat accatcaagc
     7981 acaccggtaa taaacttatg tttgcgaaaa agacgatttg ggagagaaat ataatttgaa
     8041 gctcaaataa tgcctttagc cttatcccgt ttgatttggc ttggtgttat cccaaaagtt
     8101 cgcttaaatg ccgttgaaaa attctccgaa ttggcatatc cggcaaattc agctgcttgt
     8161 gtaatactct gcccttgtaa tagtaattta taggcttgtt ctaatttaga acgccttaaa
     8221 tacgcaaaaa tagaggtttt gtggtaatgc tgaaattcat tttgtaatgt ggtcacattg
     8281 gtatggaaat atattgcaat ctgcttcaaa ctccagccgt caaatttacc gctctcaagc
     8341 aattctgtta actgttgcac ccgatctttt tttaaccggg gagcctgtgt cagctgagaa
     8401 aaagcacttg ctaataaagc taatagatta ccttctttct caagtaaccc aaatggttgc
     8461 atttcctgct ctgacacaat atcgtgaata agttttaaca tactctgagt caaaataatt
     8521 tggtgggctt ttaaatgctg tttaaagtga tgatagcttg ccaaatttaa ctggctttct
     8581 attagccatt tagggtagag aaagataaca agctcttttt gaagttgccc tttcctaaaa
     8641 attttacgcc ccatttcagc tctatttagc ggtaaaaatg cggcttgagg ttttaaactt
     8701 gcatctaatt caaatacttc cgaattaaaa tcaatttccg atcgaccact caacaatata
     8761 accaatctta gtccggcttc aaattccgca ggttcttgct ctacggtttc agtaactgaa
     8821 atctctgtat atttcagcat aagatctgaa cgtagtcggt ataaatgtga aaaacctttt
     8881 atttggttag cttcatcaat caagattgtt ttcatcatta aaaacttttt ttcgcatagt
     8941 caaaatttta ttttacaaag gttttttgca taaaaacaag atattattat attcaataat
     9001 cattcttatt taaggataaa ctaatgaaaa taaaaaaata ttcactttct ctaatcactt
     9061 tagcgattgt agctcctcaa gtattagcag aaacaacctc tcaagcagaa ctaaatgcta
     9121 ttgaggtcaa agagaaattg gcagctacca ccggctatat tcctgtttat acgactgtag
     9181 gaacgaaaac attaacctct ttggctcgta caccttttag tatcaatgtt gtctctgatg
     9241 atttaatgca tgaccaagct gttcgttctg ttaccgattc agtggcttat acctccggta
     9301 tgatgggtgg ctatcgtggt aacaattcgc ttatcgaaat ctccattcga ggcattggca
     9361 ataaaagtga tggcagtaca attccgacct atttaaacgg ttctcgctac caaactgcat
     9421 ttgaaatcga tccgttcttc ttagaaagta tcaatgtgat taaaggtcca aactccattt
     9481 tatacgggca agctaatccc ggtggcgtaa tggatattat caccaaaaaa gccggcagta
     9541 acccacatcg ccatttgcaa tttgtggtgg gaaaccatca acgataccaa atcgggctgg
     9601 atattgaaga aaatctctcc aataccttat ccgctcgttt aatcggtcaa ttagaacgaa
     9661 caaactggaa tacctaattt gtaaaagaaa aaggcggtgc ttttgctcca agcattttat
     9721 ggaaaccgac tacaaataca gaacttaatg tttacgctta ctatgcaaaa aaaccgaaag
     9781 ccggtgatcg taacttttta ccgaaagaag gaacgattaa tagcgtaaac gggaaggaac
     9841 taccctatga tatgttcctc agcgatctga actatcacgg tttaaaagcc gaacaaatgc
     9901 aagtaggtta cagtttctca cataaattta cgccaaacct aacgttccgc caaaatgcaa
     9961 gttaccataa tggcgaagag aatttcaaaa atctagttta ttggggcgat gtcggttcgg
    10021 ttttagaacg tagagctcgc cattgggatg tcaaaaccca agaaatcaac ttagataacc
    10081 aattagaatg ggtatttagc acagcaaata taaatcatac cttgttagcc ggtattgatt
    10141 ataaacgagt gcgtaaagat cttgataact atatggggat tgcccctgat tttgattggc
    10201 agaaccctgt ttatggcgtg accgttactg agcctagctt attttcaagt gaagtgaagc
    10261 atttaaaaca acttggggtt tatctacaag atcaaataga aatcggtaat tttgacttcc
    10321 tgttaggcgg tcgttacgat cgagcaaaaa acagcaacca agatcgtttg aacagtaaaa
    10381 cagagaataa ccaagaagga aaatttactt ggcgtacagg cgtagtttac aactttgaaa
    10441 acggtatcgc tccgtatatc agctacagca cttcttttgt gccatcggct gaaaaagatg
    10501 ctcaaggaaa tttcttaaaa ccaacaactg ctgggcaatg ggaagtggga atgaaatacc
    10561 aacctaccca agacacctta ctgaccttag caggatttaa aattacacaa aaagatttag
    10621 ccaattatca atggcaaacc cgctcttatg agcaaattgg tgaagtgcaa accaaaggaa
    10681 ttgaagtgag tttaaatcag caattatccg ataaattttc aatagcggct tcttatgctt
    10741 acttaaaaaa agagattact gcagataaag atggcacgac gattggaaaa acgcagtggg
    10801 gagtgcctcg ccatcaagca tctctttggg caaaatataa attctttgat aagctgaccg
    10861 ccggtgtagg tgtacgctat atgggaacga cttttggcga taaccaaaat acttttaccg
    10921 taccggcata cacactttac gatatgatgc tagcttatga ttttatgcct aacttaaact
    10981 tacagctcaa cgcacaaaac ctgacgaata aaaaatatgt cgcaagctgt gccaataatt
    11041 tttcctgttt ctatggaaaa gatcgcaatt taagtgcaac gttaaactat catttttaat
    11101 ctcaacagcc ctcaaatgag ggcttaaact tttgcaaaaa atatgaaaaa aacgaccgct
    11161 tgtattctta cttttttggt ttcatctgtg ctttatgcta acaatataac cattgagctt
    11221 aaacagaatg attttgtgca aggcaaattg attcagaagg ctcaacagcc actttccttg
    11281 tcgattattt ttcctgacca aagctctcgc ctgctggctc aaaatgtctt tggtgaacaa
    11341 gattttatgt ttaaatcaga actaatcggc acagctactt tttctattct agcgaatggt
    11401 gcaaccgttt cagaccaaga ttttacctta acgattgagc ggcatattcc aatctcggca
    11461 caaattgctc cacctaaagt aattgaaaat acacagcttg aagaactcag ccaaaaaatt
    11521 gcaaaaaatc cagaaaaaca gaccgcttta attaacgatt tttgggataa agcaaaacaa
    11581 gccggcacac cattgattga accattggac gaacagcaaa gccgtgtaac ttttttatgg
    11641 cgtggagcaa cgaaaaatgc ccgtatttgg ggcggtgtga gtactgaaca cgattttatg
    11701 caacgctttg gtgaaacgga tatatggtat aaaagttata tagtgcccaa tgacacttta
    11761 gtggaataca aattagctcc agatgtgccg acattgcccg ttgatgagaa tacccaacgc
    11821 agagcgttac tggctacggc tcaagccgat ccactcaata aaacagcata cttcgagaaa
    11881 atcggacaaa atattcataa taccgataaa ttcaactacg cttcgctact taaattgcca
    11941 aacgcaccta ctcaatcttt tttgactgaa gctccaaata ttgcaaaagg taaactgcag
    12001 cagttgattt ttgagagtgc aacactcggc aataaacaca gattattcgt ctatctgcct
    12061 gacggtttta gtgcagaaaa aaactatgcg gttctctatt tatttgatgg tgttgaatat
    12121 accgaacgag tgccaactaa aaccatttta gataatatga tcgctcagaa agtgattctg
    12181 cctactgtag cggtgtttat cgaaaatcca tcgagtgaat caagacgtgt cgagctgcct
    12241 gccaatccca tatttacgca agtattggca aaagaacttg taccttttgt tgaaaaacag
    12301 ctcaatataa aaacaaagga gcgaattatt ggcggctcta gctatggcgg gctatcctct
    12361 gcttacaccg tactcaacta tcctaatgta tttagtaaag cattgattct atccggttca
    12421 ttttggtggc aacccaaagg cacacctagt gaacaaagcc actatattgc tcaacaattt
    12481 atccaaaaag aaaaattacc actctgtttt ttcatcagtg caggttttta tgaaagcggg
    12541 aaatcggcta tttgtaagcg gtcgaattat tttgcataga attacactca attttgcata
    12601 gataaaaatt aaaaactatg caaaataatt gtagaagatc aaacctaatc tgacagtccc
    12661 ccgttttaaa ttaccgtgtc tgtcagatta atttgagctt aaattctttt ccacccaaac
    12721 gcgtctattt tgattcagca atgcttcaac accaccttgc tcaaccgctt gttgataacg
    12781 atagaatgta tctcggctca ttcccattac tttgcaggct tgagaaatat tacccagttc
    12841 ttctgctaaa tttaataaac cgctcttgtg tttaatgaga gggttgttag aataaaacat
    12901 gagagtttcc tttttgttta gattgatttt tgacactcat attctaaacg ggaaactctc
    12961 actttttaga gtgaattgtc agatcaagtc tgatcttcta cacttttata ttcaatattt
    13021 ttaaaacgct catttgtttc tttagctgta atcttaccaa gcagatttac cagattatta
    13081 cctgcctcat cgcttgtacc ggcagtgaca cgagcctgtt ggtttgcaat taaaagtcgc
    13141 tcaaagccct caatactact caaaccggct tgttttgcag ctgccatttg ttgaggcaac
    13201 caacttgcca tatatgcaag ctcaaaacta cctgcttgcc cggctgcaac agccatatcc
    13261 aatgcccgcc caatatcctc ttctttgatg ccaaattgtt gcatagagga gatcgcaatt
    13321 tttgccatat cctccgagct tgcccctgtt gccaccgccc ctttctgcaa agtaggtaat
    13381 agactcattg cggtttcggc tttgactgta ccggaggcaa tgagcgtatc aagcgtaact
    13441 aacgcatcct cttttgtgcc acccccaacc ttatccgcct ttttatcaag tttttggttt
    13501 acttctttga gcgagtctaa aatatcgtcc agcttttcct taagagcctt attcagacag
    13561 cctattaagc ctaggcgtaa aagcccataa ttgtggcgta ttttgggcta atggcacatc
    13621 aatggccccg actatcagcg atggtgatca aatgttagtg gatttcagca aaaaagaagc
    13681 ccgtggagac gataagattt atcttgtgca aaatggtgaa agcgtttggg taaaacgtgt
    13741 aagaaaagtg tgggactacg ttgaattgat tagcgataat gagtcctacc gcccaatccg
    13801 aattacagca gacgaagctc aaaacttaca aatcatcggg caggtagtcc acatcggaca
    13861 ctctttagtt taaaacagat ttaaaatagt tttaaaaccg atcaaaccta tgcaaaaaat
    13921 atcgcaaaaa ctgcccattt ttttctaatc ctgctcattt tgttttttgc atagccccaa
    13981 ccaaacaata acggcgaacc cttgtattca cggggctcgc cgttattttt ccgcccaaat
    14041 ttttttcttt ctctctatgc aaaaaagatc agtaccccac attttcaacc gcttgtagct
    14101 cacaaagcca accttgctct ttggcaagca gttcaaaatc ggtaaggcta ctctgctgat
    14161 tgagtaaaat ttccaagcta tcgccctttt taagatcgtt catcgctttt tttgccatta
    14221 ataacggcaa ggggcaggca tagccggtta aatctaaaac atattgcata gcgaaatagg
    14281 gaataaagaa aaagggcgaa tattgaaatt cgcccaatca caaaagatta gagtttacgg
    14341 cggtctgcca tcactttgcc catagccgat aatttgtctt gagctaaatg ctctcgccca
    14401 agctcaaaga gtggctcttc aatcgcaata tgcacatcat aacctgccac aaaacgctca
    14461 attaagtctc tatccacatt ttcacgttta cctgcgagca gatcttcaag ctgtgccgac
    14521 aaatagtccc aatttttatg taaatgaacg tgctggcgtt ccagttcgtc tacctctgct
    14581 tgagcttgtg gttgcacctt aataagctca gggaagaaat catcttcttc atcttcgtga
    14641 tgtaaagggg cagaaatgtt gaagtagttc aaaatctgct gcacgtcatt cttcactgct
    14701 tggtttaccc cgtttttctc aaggtaatcc ggcaaaattt gcaactgttt acagaaactt
    14761 tttactttgc tgtggcaagc ataaagcata tcaatcggct ctgcccagct tgcaaaggtt
    14821 tgtggttcaa gttgttgcat atacactcct tgttatttct gttcttttac ttcagattgt
    14881 aaaggtggca cttctttgcc aattcgggca taaaattcca ctacaaaatc atcaaaacga
    14941 tcttcttcga tggcctggcg aatttctgcc attaggcgtt gatagtagcg taaattatga
    15001 atggtgttta gtcttgcccc taaaatctcg ccacatttgt ctaagtgata taaataggct
    15061 ttggtgtagt ttttgcaagt gtaacaatca cattcaggat caagcggtgt ggtgtctgca
    15121 cgatatttcg cattacgaat ttttacaatg ccgttggtca caaataaatg tccgttacgg
    15181 gcattgcggg ttggcattac gcagtcaaac atatcaatac cacggcgaac cccttcgact
    15241 aaatcttctg gcttgcctac acccattaaa tagcgtggtt tatctgccgg aatttgcggg
    15301 caaacgtatt ctaaaatgcg gtgcatatct tctttaggtt cacctaccgc caagccaccg
    15361 actgcatagc catcaaagcc gatttcaact aatttttcca ccgagacttt gcgaagttct
    15421 tcataaatac caccttgaat aatgccaaat aacgcattcg ggttttcaag ttcatcaaag
    15481 cgatcacgag aacgtttcgc ccaacgtagt gacatttcca tcgatttttt tgcataatca
    15541 aaggttgccg gataaggagt acattcatca aaaatcatta caatgtctga tccaagatcg
    15601 tattggatct ccattgattt ttccggcgaa aggaaaattt tctcaccgct aatcgggttt
    15661 tggaaagtta cgccttcttc tttaatttta cgcagtttac ctaagctaaa aacttggaaa
    15721 ccgccggagt cggttaaaat agggccgtgc cattgcataa aatcgtgcaa gtcaccgtgc
    15781 atcttcatca cttcttgccc cggtcttaac cataaatgga aagtgttgcc taataaaatt
    15841 tgcgcccctg tcgctttaac ttcttcagga gtcattcctt ttaccgtgcc ataagtgcca
    15901 acaggcataa atgccggtgt ttcaacgtga aattcgcctt tcgggcggtt aaaagttaaa
    15961 cgcccacgac gagcgttacc acttgttgtt tttaattcgt acttcatttt aatccacaaa
    16021 taaacagttc gtgaaagcgg tcaaaaacca ccaaaaattt accaattaga atcgaaagtc
    16081 ggtgccgacc cctaagccga ttccaacgcc gttagagcca ccaccggctc caatactgcc
    16141 acccacaccg gttgatgagc aagcagctaa cactaaaatg ccaacgcata ataagagttt
    16201 tttcattttt tgctgtccta aacgaaaaag agagtctatg atagacccaa tgtattctaa
    16261 cctgtttaat ggattaaacc taattttaaa gggtaaatta tgaaaatttt acgtaaattc
    16321 gctgctgtat gcgttgtctc aatggctatg ctctctgcta acgctaattt gctcactatt
    16381 agcgagcagg aaatcaacga ctatttagcc accaaattag ctgaaaaaat tcctttaaaa
    16441 gataaagtcg gtattcctaa attatttgaa ttggattatc gcctgcattc acttaccagc
    16501 caaattggca gaaccgagga aaaaaaagta gctatttctg gcgttgttga tggactttta
    16561 aacgcaaaag gcaagaaata tgctgcctct atccatttaa atatggatac cacgccttat
    16621 tatgatccac aaaaaggggc attatttctt aaagatgtca gattgttaag ttggtctgca
    16681 acaccggcta aatatcaagc agagctgcaa atgtttttgc cggtgttggc tgatggatta
    16741 agtagttttt taaacagtac gcctgtttat actttagatg aaaataaaac aaaagaagca
    16801 atggtgaaaa agttcggcaa agccattgta gtagaaaatg gtaatatcaa gctagaaacc
    16861 actatttttt aaataatttt gtgatcttcg tctaattttt acactttgat agttgagctt
    16921 ttacgcgttt tatttacaat ccaaatatcg ccattcatta tttggagagt tctatggata
    16981 tcggtattgt taaatggttt aacaatgtaa aaggatttgg ttttattaca tcggatgtat
    17041 gtgaaggaga catttttgct catttttctg aaattcaagc agaaggttat cgctctttaa
    17101 aagtcggcca aaaagtacag tttgaattag ttcaaggaga gcgaggtgcc tcagcctcaa
    17161 atatcacgcc tataagcgaa aaaacgttat aatccgtcgt taataaaatt attgttataa
    17221 ccatacttta ttagatttta aagctcagct tttacagctg agccattttt gctttttgaa
    17281 tatgccttcc tcttatcaat tagtcttaat taacctactt tatatcttcg gtattggtct
    17341 aaatattgta ctgcttaggt ttctcagttt gcattttgac ccattaaata ataacggtat
    17401 acgttttctt gttggtgggt tcaccttatt atttttcatt ttatggagat tccgcacatc
    17461 gctgtctcag ctgattaaaa ctccaaaatt gattgcgatt tctctatttg tcgggttaat
    17521 gatgtccgca aatatgtatt tttggctaaa aggggtcaaa attacaaatg ctgttaccgt
    17581 ctctattttt ggggtattag ctatgccatt tggtgtgatt attgccgcca tattctttca
    17641 agatgaaaga gaacgcatta aaagcaaagc tttctggttc ggctcaattt taacgatcat
    17701 cggttcactc ggatttattt ggcacgggaa aacactctcg attggcgaag gatttattct
    17761 tggttctgtg ttcttatttt tgtcgatcat tatccgtaat atacaaaacc tagttgtaaa
    17821 atttgctcga gaactgaacg tattaaccct aagttgtgta acatctttaa ctacttcact
    17881 ctcgagtcta ttacttagcc aacaagcagg taaatttaat gagcttttta ctgcaccaaa
    17941 ctggctacta ttctctctga tggttgctgg tatttatgcg attatgatcg gaatggtatt
    18001 aacctttcac attatccaaa cccaaggact gataacctac caagtattgg aactattaat
    18061 gccggtttca acagccatca ttgcttatat tttactggac gaacgtattt ccattgttca
    18121 aatgggcttt gcttgtattg tgattttagg ctcaagtatc gccttaaagt tagtaaaata
    18181 tcctaagcac tattaggatc tttgctaatt aatattggta aaattacatt tggtttacta
    18241 atctgagcgt tcattcatta gtaatgataa acaagcggtt attttttgtt attttttggt
    18301 aaatactgat agtcatgtat aaaaaccttt ctttgctttc accgacttat ccatttgacc
    18361 ttgaattcat cgccggtctt actcaatgtg agaaaggtaa ctatcttgat tctattgtcg
    18421 ataggcaaca aggaatgcac ggttatatgc ttcaattaac cacttttggt cgtggttctg
    18481 tttttgatgg taagcacgtt tttaccgctc atcgagggca gttactcctc tttacaccca
    18541 atgccgttca acactaccac cgtcacccgg aaagccaata ttggcactac aaatgggtct
    18601 attttcagcc gaatcctaaa tggaataaat ggctgaattg gtcagatatg gaagaaaaaa
    18661 taggacgtat caccattagc gatgatcgtt actttcagga aattagccaa cttttcagta
    18721 aaattgaatt agaacttaaa tccagtaaat tttttaaaga agatattgca acaagtttgt
    18781 tggaatactt acttatgaaa tgtatttccg ccgagaaaat tgaggttatt cctgtcattg
    18841 atcaacgcat tttgacagtt tgtgatttaa tcttaacgaa tttggctaaa aatgagagct
    18901 tagaagcaat ggcagaaaaa gtatttttat cgccatctcg cctctcacat cttttcaagc
    18961 aatcgctggg gatcagctta gtgcaatggc gggaattaca acgcatttcc gaatccaaaa
    19021 aattgcttta tttctctaac atctctatct ctaatattgc gaaatcctta ggctatgagg
    19081 attctctcta cttttccaaa attttcaaaa agcataccgg gctgtcaccc tctgagttta
    19141 gaaccttaga acggcgtaaa gacagtgaaa tgtgatcttg atctcacttt actttgcata
    19201 gcagaatttt ccatatcgat aacaaaaagt tacctgtttt tctctcattc aaaagcataa
    19261 gatacaaaca gctttaatag tgctgtttct attagagaag ggatatcaag ctctgtgagt
    19321 gatattcagt gaaataactt cttatgtatg agggaagaac aatgaaaaaa ccaacgttca
    19381 agcacgcatt attttcaagt attttagctt tagcctgtta cggctcggca tttgccaatg
    19441 atgttgttaa tatctccaaa attgacggta tgccgtggtt taatcgtatg gcagagggtg
    19501 ttgtgcaagc aggcaaagat aacaatatca atgcttatca agttggtcca tcaaataccg
    19561 atgcaccaca acaagtaaag ttaattgaag atttaattgc gaaaaaagtt agtgctattt
    19621 ccatcgtccc taacgatgca aatgccttag aaccggtact gaaaaaagcg aaacagaacg
    19681 gtattgtggt attaaccaat gagtcagtcg gacaacctag tgccgattgg gatattgaaa
    19741 ttatcgataa tgcacaattt gcagcagact atgtagaaga agtagcaaaa gctatgggcg
    19801 gaaaaggcgg ctatgtgatt tatgttggtg gtttaaccgt gcctcaacat aatctgtggg
    19861 ctgatttatt cgtgaaatac cagaaagagc attatccgga tatgtttgaa gtgaccagca
    19921 gaatgcctgt tgccgaaaat attaatgatg cacgccgtac caccattgat ttagtgaaag
    19981 cccattccga tcttaaagcg gtcgtttctt ttggttcaca aggtcctatt ggtgcagggt
    20041 tggcagtgaa agaaaaacgc ttaaaaaata aattaaatgt cttcggaatg atgattcctt
    20101 cccaagcagc caatttaatt aaaagcggtg atattacaat gggaattacc tatgacccgg
    20161 ccaatgcagg ttatgcttta gctgctgtcg ctgccaaagt attaaaaggc gaaaaaattg
    20221 aggatggatt agagatccca acggtcggta aagccaaagt agatagtgag aaaaaactac
    20281 ttcaattcca caatgtgctg aaagtcacca aggaaaatat cgataaatta tattaatttg
    20341 cttgaaatat gggctgatag ccagcccata ttttccctca ggaggcactt atggcattta
    20401 tttcgatgcg gcatatcagt aaaacattcc acggcataaa agcattaaat caagtcaatc
    20461 tctcattaga ttatggcgaa gcactttgtc ttgccggtca aaatggctgt ggaaaatcaa
    20521 ccttgatcaa aattctttcc ggcgtttatc aaccggataa aggggctgaa attcaaattg
    20581 gtgcaaccca atataccaag ctgacaccac aggaatcgat tgataaaggt attcaagtga
    20641 tttatcaaga tttagccctc ttccccaatt taaccgtggc agaaaatatt gccattaacc
    20701 tgcaccgaaa atttggctgg gtgagtcaag atcacattca tcaggttgcc ctcactgcta
    20761 ttcaaagcat taatgcaaat ctagacctga atgcaatatt agaagattta ccgatcgctc
    20821 aacaacagtt agtcgctatt tgtcgagcgt tagcacaaaa tgccagatta ttgattatgg
    20881 acgagccgac tgcctcactt actgcaaaag aggtcaaaga tctgttagat gtcgtcatca
    20941 aacttaaaag caaaggcatt agcatcatct ttgtcagtca taaattgcaa gaagtaatga
    21001 gtgtttccga tagcgtatta gtgctgaaag atggcaatat ggttgggcaa tatcctatcc
    21061 gtgaaatgaa tgaaaaacgc cttggtttcc taatgactgg gctggaaatc gattacaagc
    21121 ggttagattt gccggatttt ttgcaaagaa aaaccgtatt ggaagtccgc aatttaacgc
    21181 tgcctcatca gtatcaagag attaactttt cgctacgaga aggggaaatt gttgccctta
    21241 caggattgct cggttcaggg cgtactgagc tttgcctaag tttattcggc attactcaac
    21301 cacaatccgg cgatatttta ttaaacggtg aaaaagtgat atttaacact aaccgtgatg
    21361 ccattgccaa agggattgct tatgtatcgg aagatagaat gcacaccggg ctgattatgg
    21421 cagagtcgat tcatcacaat attatttcga ctatttttca caaaatcacc gataaattac
    21481 agattattca atcctcgaag gcttatgcaa gtagccaagc cttgattgat tcattaaaga
    21541 ttaaagtatc cgattcagat ttgcctgtta ataccctttc cggagggaac gcacagcgag
    21601 tttcgattgc aaaatggctg gcaatcgacc ccaaaattat tattttagat gccccgacta
    21661 ttggggtcga tatcgccaat aaagaaggga tcttccaaat tattaaatca ttggctcagc
    21721 aaggcattgc agttattttt gtgactgatg aagtggaaga gacctactac aacagccatc
    21781 gggtaattgt aatgaaaaaa ggtcgcattg ttgatgaaat cttgccggca tattccagtg
    21841 aaaaatcgat tgcggaggtt atttatgaaa atcagcaata atcatattct ttccagtacg
    21901 ttactgattt taatcctatt attaacccta tttactcgtg attttgcaac tattgagaac
    21961 ctttatgatg ttgtaaataa ttacgcaatg ttaatgattt tagcttgtgg tttatttgtg
    22021 gtattgctgt ctggcggcat tgatatttct ttccctgcta tcactattat ttcccaatat
    22081 gttatggtca ctctgatcgg taaatatgat gtaggatttg ccggcgtttt tgttatttct
    22141 tccaccatcg gcatattatt aggttttatt aatgctctat ttgttaatcg gcttagtgtc
    22201 ccttccatta ttattacgat ctcaacactc aatatttttt atggcggact actctatttt
    22261 accaaaggtg tatggcttta tgagtatccc gaatggttta cccaagaaat cgtgttcttt
    22321 aaacagataa ctgctgaggg agtggaattt ggattatcgt ttcaagcatt aatggctatt
    22381 ttggcggtga tattaaccgg cttaattacc aataaactca ctattggtcg aaaaatttac
    22441 gctcttggtg gtaatccgga tgcaacctcc cgtattgggt ttaatctctt atttctccat
    22501 ctatttgcat acggttatat gggctttatg gcaggcttgg caggcatagt gcaatcttat
    22561 accgtacaat ctgtcgcacc ggattcacta ctgggttatg aattaaccgt cctagctgcc
    22621 gttgtattag gtggtgctag tttatcaggt ggtagaggca ccctgcttgg tacagtaatg
    22681 ggcgtaatgt tactggcgat tattcaaaac gggctaaatt taatgaatgt atcgtcttac
    22741 tggcaaacca ttattaccgg tatcatcatt atcttaagta ttagtgcaac agccttaagt
    22801 cagcggaaaa aacaaggagc ataacgatga aaagtaaact ggatccaacg attttctatc
    22861 tcttagcact cttcgcagtt gcagttatcg cctttagtat tttcattccg gatatttttt
    22921 ggtctgtcag taactttcaa tctatggcat cacaaattcc agtattaggt attttaaccc
    22981 tagcaatggc attaccgatg ttaacaggtg gaataaatct ttccattatt gccggaatga
    23041 atgcttgctc attaattatt gcctacttta ttacgcaata taccggtatt tcttggttat
    23101 ttattgctat tttattaagc ctttgctgtg ccttagccat tggattactc aacggcacat
    23161 taattgccat tattcgtgtt tcaccaattt tggcaacctt aggcacaatg actttaatta
    23221 acggcattaa tattctagtc actaacggtt caaccattgc gaactttccg gaaacaatgt
    23281 tgagtattaa tgcttcagcc tttttatgga ttccgctacc cattctaatc tttctctttc
    23341 ttgctgggct gatttggttt ttcttagaaa aaactgcaat gggtaaagcg gtttatttca
    23401 tcggcaataa tgaaaaagcc acctattatt cgggtattaa taccaaaaaa gtgctgattt
    23461 gggtttatgt tatctcctca attctttgtg tatttgcagc tattttgatg atgtctaaac
    23521 tcaattctgc aaaagcctct tatggtgatt cctatttgtt gatctccatt ttagccgcag
    23581 tattgggcgg tattaaccct gatggaggta aagggaaact attagggatt atgctcgcct
    23641 tagttttatt acaagtgatt gaaagtggct taaatatgct cggcattagc agttacatta
    23701 caatgatttt atggggaagc ttattgttat tctttatctt cctccaaaaa aatcgccttt
    23761 tccgactaac acagtaatgg tggtagatta tgcaaaatga aaaacaactc attgaacaag
    23821 gtaatactgt tattggtatt gaattgggct caacccgaat taaagcggtg ttaattagct
    23881 cagatgggac gattttagca accggtgggg cggattggga aaatcgactg attgacggta
    23941 tttggaccta tcatcaaaat gaaatatggg aaaaactaca agctgcttat atggatttaa
    24001 gcaagacagt caaagaaaaa tatcacacaa ccattcgcac agccaaagca ttgggaatta
    24061 gtgcgatgat gcacggctac ttacctttcg ataaacacgg aaatccgctg gttgccttta
    24121 gaacttggcg aaacaacatt accctaacct catcggaaaa attgaccgca ctctttcaat
    24181 acccaattcc gcaacgttgg agtattgctc atttacacca agcattgctt aaccaagagc
    24241 ctcacttgcc ggaaattgat tacctgacaa ccctctcagg ttatgtgcat tggcaactga
    24301 ccgatcacaa agtgttaggg attggcgatg cttccggcat gttcccgata gatactgagt
    24361 tgaaatccta caatccaaca atgctggctc aatttgatcg agccattgcc gactaccgta
    24421 tgccttggaa attggaagcg attttgccac aagttcgtgt tgctggtgaa caagcgggca
    24481 aattaaccga aaaaggtgca aaattgttag atccaaccga taatttgcaa gctggcattc
    24541 cactttgtcc acctgagggt gatgccggaa caggtatgat tgcaaccaac tgtatcaaag
    24601 aaaaaaccgg taatatttct gccggcacct ccgcatttgc aatgattgtg ttagaaaaag
    24661 ccctatccaa agcctattca gagctggata ttgtgacgac cccggcaggt aaattagtgg
    24721 caatggctca cgctaataat tgcacctctg atattaatgc gtgggtgaat ttattcggcg
    24781 aatgcttatc ggtttttggc gtaaatatct gcaccgaaga actttatgaa atgttatttc
    24841 tccatgcctt gcaaggcgat gcagattgtg gagggctatt atcctacggc ttccactccg
    24901 gtgaacataa tgtcggttta tccgaaggct gtccggtttt cttgcatcca acgaatgccc
    24961 attttaactt agcaaacttt atgcgaaccc atctctatac cgcttttggt gcaatgaaat
    25021 taggaatgga cattctcatt aaccaagaaa aagtggaaat ttcccgtatt ctcggtcacg
    25081 gtggtatatt taaaacagaa ggtgttgcac aaaaaattct gtcttccgca ctgaatattc
    25141 cattggctac cgcaagtact gcttcaaatg gcggagcttg gggaattgca ttactggcag
    25201 actttctcag cgtatcagac cgttacagtt tagaagaata tttagataat tgcattttca
    25261 acaccaccaa actcaatctg gttcaaccgg ataaaacaat gagtgaaggt tatgaacgct
    25321 ttatgcaacg ttataagcaa ggcattcctg tggtagaaaa agcgttgttt ttaaatacag
    25381 attaaataat tataatttaa gtatcacaag cggttatttt tgcaaaaaac gaccgcttgt
    25441 tatttacatt tgtacaaaaa atacctacta taaagacgca tttgtaaaat gtgcattgat
    25501 atatcgcaag ttttgtgtat aggaaatgaa ctaattactg tgtcaatcag tccctttctt
    25561 catcgttata ccctcttgca aatccgatta atctatcctt agttaaggtg ttttatgtta
    25621 gcgatttggc aaagttttaa acaaaattat ctaatcaaat attggaatcc tgttgcagca
    25681 gtgatcgcag ctggtattat ttcagcttat tatttcggca ttactggcac ttattgggcg
    25741 gttacagggg aatttacccg ttggggcggt catctgttaa atgctttggg tgttgatgtt
    25801 tcgaactgga gctattttca actcatcggc ttagacggca ccatctttac ccgcattgac
    25861 ggtgtgatga ttctcggtat gtttgccggc tgtctttctg ccgcattatg ggcgaacaac
    25921 gtcaaatggc ataatcagcc acataaaaaa cggattatcc aagccttgat tggcggtgcg
    25981 ttagccggtt tcggagcccg tttagcaatg ggctgtaacc tcgcctctct ttttaccggt
    26041 attccgcaat tctccgtcca cgcttggttt ttcacctttg cgaccgccat cggcacttac
    26101 tttggggtaa aagtgacttt attaccgatg tttagagtga aattagagct gaaaaaaggg
    26161 gcagcaaaaa tcaaagaaaa cgatccgaaa caagctaatc gccgtttttg ggttggtatg
    26221 ctcattttta tcacttatct ttctgcttcc ctttatgtaa tgcaatcctc aatcaaactt
    26281 ggttttgcaa tgctttgcgg cttagccttt ggcttattga ttgaacgagc ccaaatttgc
    26341 tttacctccg ctttccgtga cttatggatt accggacggg cttatatggc aaaagcaatt
    26401 attttcggca ttattgccgg cacaatcggc gtgttctctt atattcaatt aggtgtttca
    26461 cctaaaattt tgtgggctgg cccaaatgcc attatcggcg gattattatt cggatttggc
    26521 attgtgcttg ccggcggctg tgaaaccggc tggatgtacc gttcaatgga aggacaggtt
    26581 cattttatgt gggtcggcgt aggcaatgta gtcggttcaa ccctgctggc ttactactga
    26641 ggcgacttag ctccggtgct tacccttgat tatgaaaaaa tcaacctact caaagaattt
    26701 gggccggttg gcggattatt catcaattat ggcttattaa ttctttgctt aatcgctgta
    26761 gtttggtggg aaaaacgctt ccttgccaaa gcgaaagcaa aattagcaac tgcgtaatct
    26821 ttttaacttc aaccaacaag aggaaaatga ctatggcatt caccgttgta caaaaactag
    26881 ataaagatcc aaaagacatc acgcctgatt acaccttaga taccttaggc gaaccttgcc
    26941 cttaccctgc gattacgatg ttagaaacaa tgccacagct gcaaaaagga gagatattgg
    27001 aactgttaag cgattgttcc caatcgatta ataatattcc gattgatact aaaaatcacg
    27061 gctataccct attaagcgtg gaacaaaacg gcactaaatt acgctattta attcagcgtt
    27121 aattgcaaaa aattcgcaca aaacgaccgc ttgtcgtaaa atagcaacta tttaagagcc
    27181 ttgtaacgca aggctctttt attctaagag gtaaaagaaa aatgaataaa tacgctttac
    27241 ttgcaatatt ttggtttatt attggcattt atgctttact ttttcgtgaa agcactaatg
    27301 atataccgcc ttttccacat tttgataaag taagccattt tgccttattc tttatccaga
    27361 tctggttatc tgcaaacgcc tttatccgtt caaagaaagg gataccttat tttgggctaa
    27421 taatttttgc cttactctat gctttcacca gcgaatgggc tcaggcaacc ttcacctcaa
    27481 cccgagaagg ttcttggctt gatgggctag cagatatgct aggagcctca ctttcattat
    27541 tgctggtaaa atattgcaaa aaataaagca taaaagaccg cttgttatat ggtttagcca
    27601 tactacaagc ggtcattttt taccaaaatt atgccatcaa ctcatcaatc aattctttca
    27661 cacttttgat tttgttgatt tgtgaaatgc cattgcccac cgacacatag ccattgtcaa
    27721 aatccccttc taacataccc aaacgcattc ctgtaccagc gttcattacc ttagcaatct
    27781 cactacgagt tgccccattt tcgctcattt caaagcattt tttcgctaat ccagtcggca
    27841 gtgaacggta gtaatgtggt tcggtacgga ataacagcag atcattggca tttgcctcca
    27901 caatccagtt tttcactttt tcgcttgcac ggcattcttc ggtggcgata aatgccgtgc
    27961 caatccacac gccttcagcc ccaagcgtta aggcagcctg caccgctttt ttatcggcaa
    28021 taccaccagc cagcattatc ggcaaatcca ccttgcccac aaattccgcc agcacattaa
    28081 aactgcctac ctctttcatc ggcaaagtac cgccctcatc aaaacccgtc agcaccaaaa
    28141 tatctgctcc caatgcttgg gcttttaaag cgtccgccaa attgggatta ggcaaacggc
    28201 agatgatttt aatgccagca gctttgaatt tggcgtaaat ctctgggtca agccagccgt
    28261 tatccagcac cacaggcaca cgctcttcaa tgaataaatc caccattaac ggaatcagcg
    28321 aaaaatcata agacaaaata aatggtacgc caaaaggctt atcggtcaat gccttaacct
    28381 tacgaatctc gttacgcata cggtcaagta cttcttcgtt ggaagttgga ttggtggttt
    28441 gccctgcgtg tggggctaaa aaaccaagcc caccagcctc ggcaacgctt gctaccagat
    28501 gagcgtccgt cagccaagac attggcgctt ggacgatagg gtgcttgata tttaagattt
    28561 gggtaatgcg gttcattgga ttttcctgtt tgaataaaaa gaattggacg tagtttaatg
    28621 gttttggatt tgagagggaa tgcgtgaaaa tgggaaggtg gttttcggat ttggaaaatt
    28681 atcaatgcta aaatacttga aatacacacg ccaatcctca tatcaacaaa attgaatatt
    28741 taattatggt aaaagaaaat gtctattaga tgggaaaaca tcaagccctt acaaggttct
    28801 caaaatagtg cttttgaaga gctagtatgc caattggcac gccaagaatt taaatctcaa
    28861 ggaaaattta ctcgaatttc tgcacctgat ggtgggattg aagcaatgtg tgaattgcca
    28921 gatggttccg tatgtggttg gcaagccaaa tattttttaa gctcattttc ttcatcacaa
    28981 tggcaacaaa ttgaagattc ctttaaagaa tctttaaaaa actatcctaa actaaccaaa
    29041 tactatgttt gtgtggcaac cgatagagca aatgccaatg tatctggaaa gaaatcattt
    29101 cttaccaaat gggaggagta tacccaaaga tggaaagact ttgctcaatc acaaggtcgt
    29161 gaaatagaat ttgaattttg gggaagtttt gaattatctg acttattatc aaaacctgaa
    29221 aatgcaggca aaaaattctt ttggtttaac gaaagcgaat tatctgacaa atggtttgaa
    29281 caatacaatc aacaagccat taataatctt ggtgtgcgtt atacacctga aattaatgtt
    29341 gatttaccta ttgcaatgca attagaaagc ttggcaagaa cccaaatttt caaaaaacat
    29401 ctgagtgatg aatttcataa attgttagta gaaattaaat cacaatacaa atctctttat
    29461 cgttacgaag cgttggaaaa tcattttgaa cctgtatatg aac
//
LOCUS       DANMCL010000024        28660 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.024, whole genome shotgun sequence.
ACCESSION   DANMCL010000024 DANMCL010000000
VERSION     DANMCL010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28660
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.024"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            68..1042
                     /gene="znuA"
                     /locus_tag="PXF40_000968"
     CDS             68..1042
                     /gene="znuA"
                     /locus_tag="PXF40_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HDL5802327.1"
                     /translation="MFKRTLIGLAVLGASVAQADVLTSIKPLGFIASAITEGVTETKV
                     LLPVTASPHDYSLKPSDVTQLQSAQLVVWVGDGLEGFLEKSIEKLPREKVLTLEDVDA
                     IDDIVDKASKKEDKDDDHDHKHEHKHEHKHEHKHEGHNHEGHNHDHHGHSHDEDWHIW
                     LSSEASELAAEQIAARLSEQMPEHKAKIAENLAKFKANLTAKKAEIAKQLEPVKAKGY
                     YTFHDAYGYFEREYGLNSLGSFTINPTVAPGAKTLTAIKKNIAKNKAQCLFAEPQFTP
                     KVIETLAKETKVNVGQLDPLGAKVQLSATAYPEFLQVLADEFSQCLTK"
     gene            complement(1094..1414)
                     /locus_tag="PXF40_000969"
     CDS             complement(1094..1414)
                     /locus_tag="PXF40_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnA domain-containing protein"
                     /protein_id="HDL5802328.1"
                     /translation="MIYPTCPECKSENTYHDSIQFVCPDCAYEWTGEETDQDDDVLIV
                     KDSNGNLLSDGDDVLLIKDLKLKGSSEVLKKGTKFKGIRLAQGDHNVDCGKIMLKSEF
                     LKKA"
     gene            1555..3918
                     /gene="rnr"
                     /locus_tag="PXF40_000970"
     CDS             1555..3918
                     /gene="rnr"
                     /locus_tag="PXF40_000970"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HDL5802329.1"
                     /translation="MIVDPNYQQELEKYENPVPSREFILNTIREHNAPMSRDELLSAF
                     HIDDEERMEGIRRRLRAMENDGELVFTKGKRYALPEKMDLIKGTVIGHRDGYGFLQVE
                     GHEKGATKSEDWFIPNAQMVKVMHGDFVLAQPNGTDRRGRKEVRIVRVLEARKKQIVG
                     RFFLESGIGFVVPDDSRVNQDILIPDEHRMGARMGQVVVVELQERKASFSRPVGIITE
                     ILGDNLAPGMEIEIALRNHDIPHIWPEGVEKQIRQFSSEEVPEEAKQGRVDLRDLPLI
                     TIDGEDARDFDDAVFAKKEGNGWRLWVAIADVSYYVRPKTALDLEALNRGNSVYFPNR
                     VVPMLPEVLSNGLCSLNPQVDRLCLVAEMSVSSKGELQDYQFYEAVMNSHARLTYTKV
                     WKMLEGDEALRERYAPLVPHIEELYAMFQTLMKARHKRGAIEFETIENQFIFNPQGRI
                     ERIEPLIRNDAHKLIEECMILANIAAARFVEKANEPALYRIHDKPSEEKLLSFKSFVR
                     ECGLTWDVGLDPTPKDYGVLLEQIAERADKELIQTMLLRSLKQAVYAADNIGHFGLAL
                     TEYAHFTSPIRRYPDLLLHRAIKYLIEKGKGNTRYYTDGGGYHYKLDDMDEFGDKCSA
                     TERRADEATREVADWLKCEFMQDHLGEEFDGVISSVTGFGLFVKLNELLIDGLVHIST
                     LDNDYYHYDADRQRLIGGSGIIYRLGDAVRVKVINVNLDEKKIDFELLTGNKKTGKTA
                     KKKAKATEVPVFKEPKTVKKAKKVAEKKPAKSAKKRTKTTASKSRKK"
     gene            3922..4188
                     /locus_tag="PXF40_000971"
     CDS             3922..4188
                     /locus_tag="PXF40_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802330.1"
                     /translation="MDYKKQILFSLLFALVIAIISYFLFTYIPFDCSDLSKLNDSQRL
                     ECRTAEFLGVYYWLPHTTTLFFGSVLLYWAVYGMISLVQAVLKR"
     gene            4411..4869
                     /gene="mraZ"
                     /locus_tag="PXF40_000972"
     CDS             4411..4869
                     /gene="mraZ"
                     /locus_tag="PXF40_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HDL5802331.1"
                     /translation="MFRGASSISIDSKGRIAIPTRYRAELLEKHHGILVCTVDIRQPC
                     LLLYPLHEWEMVEQKLLALSNFDPVQRRIQRVMQGFATECEMDSAGRILLSPTLRQHA
                     QLEQQIMLVGQLNKFEIWQDKQWQAQIAEDLAFGSSAEILDCEALKNLSL"
     gene            4885..5823
                     /gene="rsmH"
                     /locus_tag="PXF40_000973"
     CDS             4885..5823
                     /gene="rsmH"
                     /locus_tag="PXF40_000973"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HDL5802332.1"
                     /translation="MSENPKHITVLLHEAVDGLAIKPNGIYIDGTFGRGGHSRLILSK
                     LGENGRLIATDRDPRAIAEAQTISDPRFQIEHTAFSAIPELCERMGLVGKIDGILLDL
                     GVSSPQLDEAERGFSFMRDGPLDMRMDTTKGLSAAEWLAQVSAEDLAWVLKEFGEERF
                     AKRIAQAVVSYNKSANEKISRTLQLAQIIADAVPFKDKHKHPATRSFQAIRIFINGEL
                     DELEKALNSALTVLAPEGRLSIISFHSLEDRMVKQFVRKHSKGMDVPRGLPILEAELT
                     KNIPLKTIGKAIMPSEAEIEANARSRSAVLRIAEKR"
     gene            5842..6153
                     /gene="ftsL"
                     /locus_tag="PXF40_000974"
     CDS             5842..6153
                     /gene="ftsL"
                     /locus_tag="PXF40_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HDL5802333.1"
                     /translation="MSNERYPLHQIIIDDIFSHNKVALLLLIGVVISAVATIWITHQT
                     RLSVSEQGQLIQANQKLESQYTNLQLEENSRSSRARVDAAAKSFGLQPIKKEQEIILV
                     E"
     gene            6157..8217
                     /locus_tag="PXF40_000975"
     CDS             6157..8217
                     /locus_tag="PXF40_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsI"
                     /protein_id="HDL5802334.1"
                     /translation="MVKSVKLKRKQEAPVAKAEPQQAEGKKTPSFLPTRFRVVVFFML
                     LMVGGLLAQTAYIQLFDSERLIKEANNRSLRTKELQFTRGRILDRNGRFLSISVPMYS
                     LTLDPREYFDTKLRRSNESWRALAIEMETSKGKIEANVNKFIEKKNFSKEKVDFDPRS
                     ILNTKSEGYWTQLAQVTGLDYNSLIEKVRNNPSSVFLRLDNENLVRERQKFQALSKEI
                     GRSYNDIMDELYSKNRQRFLYLSRHQSEAISEYAKELDIDALVIKVESRRFYPLAEES
                     SQLIGFTDKDDMHGSEGLERSFDSLLIGKNGKQIIRKDAKGNIVENIRSEKQYDPQDV
                     MLSIDEELQSMVYGEIKKAVQENNAESGTAVLVDVQTGEILAMANAPSFNPNKRDSFK
                     PELMRNRAITDTFEPGSTVKPFTVLTALQNGVTYRDEVIGTRPFVVNGHTIKDVAPRD
                     SLTLTGILQKSSNIGVSKLALRMPANALVDTYTKVGFGKDTGLGLGEQRGTNGDRKRW
                     ADIERATLSYGYGLNVTPLQLARAYATLGSFGLYRPLSITKVDPPVIGERVLPEKTTR
                     DVVHMMESVAAKGEGGHRAAVDGYRVAIKTGTIHKLEKGKYVEKYIAYTAGLAPASDP
                     RFALVVLINEPKAGNYYGGFVSAPLFSRIMGYTLKQRNIKPDNLTENTQSAVREIKLE
                     RPIN"
     gene            8226..9716
                     /gene="murE"
                     /locus_tag="PXF40_000976"
     CDS             8226..9716
                     /gene="murE"
                     /locus_tag="PXF40_000976"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HDL5802335.1"
                     /translation="MKRLLPFLTELDAWVEELTELKQMTLDSRQVQAGDLFVALKGHQ
                     VDGRKFIPNAIEQGAAIILAEADEDQPEIELDPKFAKFNLDRTACCKVVSVPRLPKLL
                     SEIAGALYHNPSHKLTLAGITGTNGKTTTAQLLAQWHNLLGGKSAVMGTIGNGLYGQV
                     QEAVNTTGSAIEIQHNLANFVELGADFCAMEVSSHGLAQFRAEALDFDLAIFTNLSRD
                     HLDYHNTMEEYAQAKFRLFNELSTKAQVINADDEIGREWLTQLPNAVAVSTDPKFAGN
                     HQFVKATAVKFTLQGASIAFESSWGNGELHSRLIGAFNVNNLLTAFAGLLALGFDIQE
                     LVKTAPNLVGVAGRMECITAPNKPMVIVDYAHTPDALEKALQAARLHCEGELWCIFGC
                     GGDRDAGKRPLMATIAEKLTDKVIATDDNPRTEDNQKIMADIVKGFSKPQQIIHNREE
                     AIKTAIEQAKATDVILIAGKGHEDYQIIGTEKLHFSDQETARKYLF"
     gene            9804..11198
                     /gene="murF"
                     /locus_tag="PXF40_000977"
     CDS             9804..11198
                     /gene="murF"
                     /locus_tag="PXF40_000977"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HDL5802336.1"
                     /translation="MIKLTTQQIAEILNAKLIGNGETVVETTSTDTRQAVENGLFFAL
                     KGENFDAHHYLQNAVAQGCVAVVVERECEIDVPQLVVADTRLALGELAKWLKAKLNPK
                     TVAMTGSSGKTTVKEMTAKILQKMTACEQEVLYTFGNLNNDLGVPMTLLRLTEQHKYA
                     VIELGANHIGEIAYTTAIAQPDACLVNNVAAAHLEGFGSLAGVAQAKGEIYRGLKENG
                     KAIVNLAFYYPQWQKEIGSREMQSFSYIGSDSDSYADYWAEDVELHLSGSRFTLHTPQ
                     GEIAIDLPYLGKHNVSNALAATSLAMSVGATLEAVKAGLEQRSMVKGRLYPVQINDHC
                     LFIDDTYNANVDSMKSAISVLENYPAYRIFAVGDMAELGEESSKCHQEVADFAKNAAL
                     DLIVSFGKESAVISQQAEHHFTDKQQMVDFLLPIILQKIEQKQPLVLLAKGSRSQKME
                     TVISELCKPFNLNF"
     gene            11219..12301
                     /gene="mraY"
                     /locus_tag="PXF40_000978"
     CDS             11219..12301
                     /gene="mraY"
                     /locus_tag="PXF40_000978"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HDL5802337.1"
                     /translation="MLVWLAELLVQYNTAFNVVSYITFRAIMALLTAMGIGLWIGPKV
                     IRRLQILKFGQEVRNDGPESHFKKRGTPTMGGVMILAAIGVSTLLWADLRNSYVWFTL
                     FVLFGYGAVGFVDDYRKISRKNTDGLIARWKYFWLSAIALVAVFGMYAVGKDTAATQL
                     VVPFFKDVMPQLGLFYIVLSYFVIVGTSNAVNLTDGLDGLAIVPTIMVASAFALIAWA
                     TGNFNFAQYLHIPFIPNAGELVILCTAIVGAGLGFLWYNTYPAQVFMGDVGSLSLGGA
                     LGVIAVLVRQELLLVVMGGVFVVEALSVILQVGSYKLRQKRIFRMAPIHHHFELKGWS
                     EPRVIVRFWIITLMLVLVGLVTLKLR"
     gene            12365..13666
                     /gene="murD"
                     /locus_tag="PXF40_000979"
     CDS             12365..13666
                     /gene="murD"
                     /locus_tag="PXF40_000979"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HDL5802338.1"
                     /translation="MQKQYENKTVTIIGLGTTGLSCVDFFKKKNANIQVIDTRANPAG
                     ADKLDVTIPLHTGGLNSEWLLKSDLIVISPGLAVATPEIQQAIQAGVEIVGDVELFCR
                     EAKAPIIAITGSNGKSTVTTLTTEMAKQAGIKVGMGGNIGVPVLSLLEGDYDLFVLEL
                     SSFQLETTYSLKAKAATVLNISEDHMDRYDSIADYRQAKLRIYDNAENIIVNGEDAQT
                     YPIQAVKKVIRFAEQNAEYSLRNQMLYSGDDAIIQTKQMLISGRHNEMNALAAMALAE
                     AANVPREGIVKALQIYGGLPHRFQAVATNDGVRWVNDSKATNVGSTVAALNGLNIAGT
                     LYLLLGGDGKAADFSELKPLINKPNIVCYCFGQDGAALAELSEQSVLVETMQQAIEAI
                     RPQLKKGDMVLLSPACASLDQFKNFEQRGEVFMALAQGQHA"
     gene            13666..14844
                     /gene="ftsW"
                     /locus_tag="PXF40_000980"
     CDS             13666..14844
                     /gene="ftsW"
                     /locus_tag="PXF40_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative lipid II flippase FtsW"
                     /protein_id="HDL5802339.1"
                     /translation="MLERIKSEWDKWVRLTPSNSLYDRTLIWLFLGLLIIGFVMVTSA
                     SLPVSTRLNNDPFYFAIRDGLYIIASIIFCYVFVQIPIEKWEKHNLALFFISIGFLIA
                     VLIFGRSINGAVRWIPLGILNFQPAELAKLAVICYFASFYVRKYDEIRKEKASFWRPA
                     VILFLFGFLLILQPDLGSTFVLFVLTFSMLFIVGAKIMQFMFLGVVGTVLFAVLILTS
                     EYRLKRVTSFMDPFADAYGDGFQLSNSQMAFGQGEFWGQGLGNSVQKLEYLPEAHTDF
                     VMAVIGEEFGFFGIACIVLLLILLTVRALKISKESLVLEERFKGYMAFGIAIWVFLQG
                     FVNLGVASGLLPTKGLTFPLVSYGGSSLVIMSIAIAVLLRIDHENRAERIGHAKIKTI
                     "
     gene            14963..16018
                     /gene="murG"
                     /locus_tag="PXF40_000981"
     CDS             14963..16018
                     /gene="murG"
                     /locus_tag="PXF40_000981"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HDL5802340.1"
                     /translation="MAKKLLVMAGGTGGHVFPAIAVARELQKQGWQIRWLGTKDRMEA
                     TLVPKHGIEIDFIEISGLRGKGVAALLKAPFAIFKAVMQARKIIKNYQPDAVLGMGGY
                     VSGPGGIAAKLCGVPVILHEQNAVAGLTNVWLSKIARKVLQAFPTAFKEAEVVGNPVR
                     EDLSALPLPNERFAKRGYPINILVMGGSQGARVINQTVPEVAKVLGNNVFISHQVGKG
                     NLAGIEEVYQQTGNGIASEFIDDMKAAYEWADLVICRSGALTVCEIAAVGLPAVFVPF
                     QHKDRQQFLNANYLAADGAAVIIEQSDFTPKALQQALEPLIANRQLLLDMSMRARAKS
                     TPMAAKRVAEVIIQEAN"
     gene            16094..17521
                     /gene="murC"
                     /locus_tag="PXF40_000982"
     CDS             16094..17521
                     /gene="murC"
                     /locus_tag="PXF40_000982"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HDL5802341.1"
                     /translation="MKNFQDKVKKLVPEMRRVSQIHFIGIGGAGMSGIAEVLLNEGYQ
                     ISGSDIADRAVTQRLSAAGAKVFIGHQAENIAGASVVVVSTAIDETNPEIIAAREARI
                     PVIRRAEMLAEIMRFRHGIAIAGTHGKTTTTAMISMIYTEAKLDPTFVNGGLVKSTGK
                     NAHLGASRYLIAEADESDASFLHLQPMVSVVTNIEPDHMDTYGGDFEKMKETYVRFLR
                     NLPFYGLAVMCADDETVMEIAPRVGRQVITYGFSENADYRIEDYQQTGFQEHYTVVCP
                     SGERIDVLLNVPGMHNALNATAALAVAKEEGIGNEAILAALADFQGAGRRFDQLGSFI
                     RPNGKIMLVDDYGHHPTEVDVTIQAARSGWEGKRVVMIFQPHRYSRTRDLFDEFVQVL
                     SKVDALILLDVYAAGEAPIVGADSKALARSIRNLGKVDPILVSDTDQLGEVLDQIIQD
                     GDLILAQGAGSVSRISRGLAESWKN"
     gene            17611..18522
                     /locus_tag="PXF40_000983"
     CDS             17611..18522
                     /locus_tag="PXF40_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HDL5802342.1"
                     /translation="MSIKNEKIAVLFGGVSQEREVSLNSGAAVTAALKSLGYNVEGID
                     TKEFPIEKLKEKGIQRVFNILHGGIGENGVLQGALEQMGIPYTGCGVMASAVTLDKFR
                     TKLLWNAVGLPTADMVVVQRGQAVDFDQIIAKLGLPVFVKSSCEGSSVGVFKVKTKEE
                     LAPAIHEALKFDSIVLVEEFLAGNEYSVPVLDGQVLPAVQVIPDGEFYDYHAKYVSDN
                     TQYVVPALNDERQAEVAKLVKAAYDVVGCRGWSRIDVMEDGEGKFRLVEVNTNPGMTS
                     HSIFPKSAATVGISFEKLVERVLELSA"
     gene            18522..19313
                     /locus_tag="PXF40_000984"
     CDS             18522..19313
                     /locus_tag="PXF40_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HDL5802343.1"
                     /translation="MGIFRKKNSTNVRLNVLNPKTPVSPRKWLVFIKPLIVLLCTLFV
                     FGVYSNWQNILESWDKTPIRAYALTHKTQFTTNADIRETLSKEPALKGYFGQNIQEVK
                     DKLLSIPWVKDVAVRKLYPDRLSITLLEHKPVAIWNDTNFVSEQGTVFSLPKDRIDKN
                     GLPLLYGPDTEGKSVLEAWNKIRADLNARNLDLTSVSVDNRGSWTIRLSNQVELRLGR
                     GEWTSKIDRFVIIFPEIHIPEGNRLAYVDLRYPHGAAVGFSPIKN"
     gene            19336..20607
                     /gene="ftsA"
                     /locus_tag="PXF40_000985"
     CDS             19336..20607
                     /gene="ftsA"
                     /locus_tag="PXF40_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HDL5802344.1"
                     /translation="MTKAVESKIIVGLDIGTSKVVAVVGEVLPDGVINVMGAGVCPSK
                     GVDRGGVIDLDAAVNSIQRAIEQAESIADCQIMGVTLAISGQHIVGLNEAGSSTLSGG
                     IVTQDNIESAVDMAKAIKLQDGLETLHMIPQEYHVDRLPATKNPIGLSGMRLQVQAHL
                     IACHQAWLKNLKNAVEHAKLKVDQVVFSGLASSYSVLTEDEKELGVCLIDIGGGTMDV
                     LVYTDGALRYSKVIPFAGNNITDYLARVFTTSRPEAESLKVGYGSAISPPTHNSDKKI
                     EVAGLGGRMARTFTRAQVATVTSQCYNDLLKVVEEELTQLRHELFQKGIKQELIAGVV
                     ITGGGSQIEDIVECAKSIFGSQVRVGYPLNITGLTDYVNKPQYATALGLLQYSHYNYT
                     EQGTSTDSNEDIFAPIGRGTKKIIDFFKSKF"
     gene            20640..21887
                     /gene="ftsZ"
                     /locus_tag="PXF40_000986"
     CDS             20640..21887
                     /gene="ftsZ"
                     /locus_tag="PXF40_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HDL5802345.1"
                     /translation="MFEPIIEQTQDAIIKVVGVGGGGGNAVDRMSRSADDIKGVEFFD
                     VNTDAQVLRKRTTRQTIQIGASTTKGLGAGADPMVGKQAAEEDREAIANALKGANMTF
                     IAVGMGGGTGTGAAPVVAQIAKEQGSLTVGVVTKPFRFEGPRRMRFADQGIKELSQYV
                     DSLIIIPNDKLRGLGKQTTAVDAFAAANDVLSNCVLGITNMITSSGGSTGADINVDFA
                     DVRTVMSGKGHAMIGTGFAEGEVGEGRAEKAMNDAISSPLLENVDISGASGMLINISA
                     GTDFLLEEVYAMMDLIYGFATEDAAIVFGCNYYPEMDGKVSVTLVATGIGQPEEALHM
                     PHKAQPVYAQQGNHVQATQPTQPNHAVQQPNFTQPSSYGQPNQFSGQPQPLQQPVAPK
                     PQSVDTAQIFNPNSIPGFMRNSQ"
     gene            21919..22839
                     /gene="lpxC"
                     /locus_tag="PXF40_000987"
     CDS             21919..22839
                     /gene="lpxC"
                     /locus_tag="PXF40_000987"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HDL5802346.1"
                     /translation="MTKQRTLKQAAKVTGIGLHSGKKVTLTLRPAPANTGVIYARTDL
                     EPVVYFPASADSIRDTQLCTCMVNDDGVRISTVEHLNAAMSALGLDNVIVEVDAPEIP
                     IMDGSSSPFIYLLLDAGIEEQDAPKKFIRIKETVRVEEGDKWAELKPYNKGFKLNFTI
                     DFEHPLIPKNVGSYSIDFSAENFIQQLSRARTFTFMKDVEYLQSIGLALGGSLDNAIV
                     LDDYRILNEDGLRFKDELVRHKMLDSIGDLYMCGYNILGEFSAYKSGHGVNNKLLRAV
                     LENKNAWEFVTFEDKAEVPQGYQVQQEIFI"
     gene            23012..24694
                     /gene="recN"
                     /locus_tag="PXF40_000988"
     CDS             23012..24694
                     /gene="recN"
                     /locus_tag="PXF40_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HDL5802347.1"
                     /translation="MLTQLTINNFAIVRHLILELNEGMSVITGETGAGKSIAIDALGL
                     CLGYRSESGMIRNGSDKADISATFTMQPHSPAYLWLQEHELLDEDNPQECILRRMINI
                     DGRSKAFVNNRSLPVSQLRELGQYLIHLNGQHAPQLLLKNEYQLEIVDHYATLQPLLM
                     KMAKQYGNWKELNKQVKNFQKQCQENEARKQLLEYQVEELDEFAIKANEFEEMEEKYN
                     ILSSSEELTELSDEITRLLSDDEINANSLIYKALRNAENLAEVDSQYQGILDMLNEAL
                     IQIQEASSEVAQLASKIEQDPELLQELDNRIAQTISLARKHHIQPNELWQYHATLKAE
                     LQELLDFEDNEEQLIQNEKQAYQECITLAEEIYQKRLDATHKLSEQVTKQIKHLAMEN
                     GEFFIHIEHNLEKMSANGADYVEFNLRSNLGQQPQPLAKIASGGELSRISLAVQVLTA
                     NKLSTPTIIFDEVDVGISGSAATTVGKLLRKLGEKCQVLCVTHLPQVASYGNQQFNVQ
                     KYVENNQTETQMTLLTEAERIHALARLLGGSEITETVLANAKEMLNLAKNNE"
     gene            complement(24741..24816)
                     /locus_tag="PXF40_000989"
     tRNA            complement(24741..24816)
                     /locus_tag="PXF40_000989"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(24781..24783),aa:Ala,seq:ggc)
     gene            complement(24896..26335)
                     /gene="gltX"
                     /locus_tag="PXF40_000990"
     CDS             complement(24896..26335)
                     /gene="gltX"
                     /locus_tag="PXF40_000990"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HDL5802348.1"
                     /translation="MKIETLFPLDPNVKVRTRFAPSPTGYLHVGGARTALYSWLYAKH
                     NDGEFVLRIEDTDLERSTPEATAAILEGMEWLDLAWEHGPYFQTKRFDRYNQVIDQML
                     EAGTAYRCYCSKERLDEVRAEQEANKEKAKYDQHCLHNPQNDPSQPHVVRFKNPTEGS
                     VVFDDAVRGRIEIANSELDDLIIRRTDGSPTYNFCVVVDDWDMGITHVVRGEDHINNT
                     PRQINILKALGAPIPTYAHVSMINGDDGQKLSKRHGAVSVMQYRDDGYLPEALINYLV
                     RLGWGHGDQEIFSRDEMIELFDIHSVSKSASAFNTEKLQWLNQHYIRSLAPSYVAKHL
                     EWHMQTQGIDFTSGPKLEEIIPVLGERCKTLKELAESSRYFYQEFKAYDEKAAAKNFK
                     AEAVAPLAKLLEKLTACNDWTVENIHEAMNQTAAELEIGMGKVGMPFRLAVTGSGQSP
                     SMDITAKLVGKERTLARLQKAIEFIQANS"
     gene            26510..26585
                     /locus_tag="PXF40_000991"
     tRNA            26510..26585
                     /locus_tag="PXF40_000991"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26543..26545,aa:Val,seq:tac)
     gene            26634..26709
                     /locus_tag="PXF40_000992"
     tRNA            26634..26709
                     /locus_tag="PXF40_000992"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26667..26669,aa:Val,seq:tac)
     gene            26762..26837
                     /locus_tag="PXF40_000993"
     tRNA            26762..26837
                     /locus_tag="PXF40_000993"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26795..26797,aa:Val,seq:tac)
     gene            26886..26961
                     /locus_tag="PXF40_000994"
     tRNA            26886..26961
                     /locus_tag="PXF40_000994"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26919..26921,aa:Val,seq:tac)
     gene            complement(27115..28608)
                     /gene="mltF"
                     /locus_tag="PXF40_000995"
     CDS             complement(27115..28608)
                     /gene="mltF"
                     /locus_tag="PXF40_000995"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HDL5802349.1"
                     /translation="MKGLIARLFIAVALLLWAWDMIFPWQKIIHSEANHYTQIQQSKT
                     LKVGMINHPLSYFVGPEGKSGIEYDLATAFAQYLKVNLDIKTYDSSEKLFEALRNNDV
                     DIAAAGLLYHSELNDEFQIGPSYYSASWQLVYKKGSARPYRLSDLRENVIIPAGSAVI
                     PILNQLKVDNPELKWQISDKFTQEELLLKVAQGEISHTIAMSVDISAAQHINPNLAVG
                     FDLTDENPVLWYLANSSYSELQSVLLDFMSYSMETGLISRIEEKYFNHLAKFDYVDIQ
                     SYLNAIKTILPKYEPLFRAHKGELEWQMLAAIAYQESHWDPNATSPTGVRGIMMLTKD
                     TADRMKISDRTNPAQSIKAGSEYLHMLMRQMPETIPQADRIWYSLAAYNMGLGHLLDL
                     RRLTKQLGGDPDNWLDVKKNLPLLAEKRYYANLKYGYARGYEALQYVENIRRYYGSII
                     NYQRVEEQKMQEQENLPDGQIKQENSSYEKIEEKEIPTDKEITPASN"
BASE COUNT         8692 a         5510 c         6393 g         8065 t
ORIGIN      
        1 ttatagaaat tttgttttat tttgttagaa tagctcggtt caaattaaat gccataaggg
       61 gaattttatg tttaaaagaa cattaatcgg tctagccgtg ttaggtgcaa gtgttgctca
      121 agcggatgta ttaaccagta ttaagccttt aggctttatt gccagtgcca ttaccgaagg
      181 ggtaactgaa actaaagtat tattaccggt aactgcctct ccacacgatt acagcttaaa
      241 accttcagat gtgactcaat tacaatctgc tcaattagtg gtttgggtgg gtgacggctt
      301 ggaaggcttt ttagaaaaaa gtattgaaaa actgccgaga gaaaaagtat taacccttga
      361 agatgttgat gcgattgatg atattgtcga taaagcaagc aaaaaagaag ataaagacga
      421 tgatcacgat cataaacatg aacataagca cgaacacaag cacgagcata aacacgaagg
      481 gcataatcac gaaggacata accacgatca tcacggacat agccacgatg aagattggca
      541 tatttggctc tcaagcgagg caagtgagct ggcagcagag caaattgcgg cacgtttaag
      601 cgaacaaatg cctgaacaca aagcgaaaat tgcggaaaat cttgcaaaat ttaaagcaaa
      661 tctaaccgct aaaaaagccg aaattgcgaa acaattagag ccggtaaaag ccaaaggtta
      721 ctacacattc cacgatgctt acggctattt tgaaagagaa tatggtttaa attcattggg
      781 ttcatttacc attaacccaa ctgttgcccc gggtgcaaaa acacttacag caatcaagaa
      841 aaacattgcg aaaaacaaag cacaatgttt atttgccgag ccgcaattta cgccgaaagt
      901 aattgaaacc ttagcaaaag aaactaaagt aaatgttggc caattagacc cactcggtgc
      961 aaaagttcag ttaagtgcga ctgcttaccc tgaattttta caagttttgg ctgacgaatt
     1021 tagccaatgt ttaacaaaat aagttaaaaa tcccccattt aaatataaat gggggatttt
     1081 gcgattacat cacttaagct ttttttaaga attctgattt caacataatt ttaccgcaat
     1141 cgacattatg gtcaccttga gctaaacgga ttcctttgaa ttttgtacct tttttcagta
     1201 cttcagacga gccttttaat tttaaatctt tgattaataa tacatcgtcc ccgtcagata
     1261 ataaattgcc attactgtct tttacaatta gcacatcatc atcttgatcc gtttcttcgc
     1321 ccgtccattc atacgcacaa tccgggcaaa caaattgaat tgagtcgtgg taagtatttt
     1381 cgcttttaca ttcagggcag gttgggtaaa tcattttaat tcctcaaatt aataaagaac
     1441 cagattatat accgaaatcc agcaaaacgc taagcggtca tattttgccg attttttacc
     1501 aatcgagcta aaagtcagtt agaatagcct taattacaca aaaaggagga tactatgata
     1561 gtcgatccga attatcagca agaattagaa aaatacgaaa atccggtacc aagccgagag
     1621 tttattttaa atacaattcg tgaacataac gccccaatga gccgtgatga attattgtcg
     1681 gcttttcata ttgacgatga agaacgaatg gaaggcattc gccgccgtct gcgtgcaatg
     1741 gaaaatgacg gtgaattggt gttcaccaaa ggcaaacgct atgcgttgcc ggaaaaaatg
     1801 gatttaatca aaggtacagt tatcggccat cgtgacggtt acggtttttt gcaagtggaa
     1861 ggacacgaaa aaggggcgac taaaagcgaa gattggttta ttcccaacgc ccaaatggta
     1921 aaggtaatgc acggtgactt tgtgctggca caaccaaacg gcacagaccg cagaggtcgg
     1981 aaagaagtcc gcattgtgcg agtgttggag gcccgtaaga aacagattgt cgggcgtttt
     2041 ttccttgaaa gcggtatcgg ttttgttgtg cctgatgaca gccgcgttaa ccaagatatt
     2101 ctcattccgg atgaacaccg tatgggggcg agaatggggc aagttgtggt ggtggaatta
     2161 caggaaagaa aagcgagttt tagccgcccg gtgggaatca ttactgaaat tctaggcgat
     2221 aatttagcgc cgggaatgga aattgaaatt gccctacgca atcacgatat tccgcacatt
     2281 tggccggaag gggtagaaaa acaaatccgc caatttagta gcgaagaagt gccggaagaa
     2341 gccaagcaag ggcgggtgga tttgcgagat ctgccactga ttaccattga cggcgaagat
     2401 gcccgagatt tcgatgatgc tgtatttgcc aaaaaagagg gcaacggctg gcggttatgg
     2461 gtggcgattg ccgatgtaag ttattatgtt cgcccaaaaa ccgcattaga tttggaagcc
     2521 ctaaatcgtg gtaactcggt ctatttcccg aatcgggttg tgccaatgtt gccggaagtg
     2581 ctttccaatg gcttgtgttc actcaatcca caggttgaca ggctctgctt ggtggcggaa
     2641 atgtcggttt ccagcaaagg ggaattacaa gattatcaat tctacgaagc ggtaatgaac
     2701 tctcacgccc gtttaactta cactaaagtg tggaaaatgt tggaaggtga tgaagccttg
     2761 cgtgaacgct atgctccatt agtgccgcat attgaagaac tctatgcaat gttccaaacc
     2821 ttaatgaaag ctcgccataa acgaggggcg attgaatttg aaaccattga aaatcaattt
     2881 attttcaatc cgcaagggcg aattgagcga attgagccgt taatccgcaa cgatgctcat
     2941 aaattgattg aagaatgtat gattttagcc aatattgctg ccgctcgttt tgtggaaaaa
     3001 gcgaacgaac cggcgttata tcggattcac gataagccga gtgaagaaaa attgctcagt
     3061 tttaaatcct ttgtgcgtga gtgtggctta acctgggacg taggcttaga tccaacccca
     3121 aaagattacg gtgtactact ggagcaaatt gccgaacgtg ccgataaaga gttgattcaa
     3181 acgatgttgc tccgctcgct gaaacaagca gtgtatgcgg cggataatat cgggcatttc
     3241 ggcttggcat taaccgaata tgctcatttt acctcgccga ttcgccgtta cccggattta
     3301 ctgttacacc gtgcaattaa atatctgatc gaaaaaggca aaggcaacac tcgctactat
     3361 accgatggcg gtggttatca ctacaagtta gatgatatgg acgaattcgg cgataaatgt
     3421 tctgccaccg aacgccgagc tgatgaggca acccgagaag tggcagattg gctgaaatgc
     3481 gaatttatgc aagatcatct tggcgaagag tttgatggcg tgatttcgag tgttaccggc
     3541 tttggcttat ttgtaaaact caatgagctt ttaattgacg gattggttca tatttcaacg
     3601 ctggataatg attattacca ctatgatgcg gaccgacaac gtttaatcgg tggcagtggg
     3661 atcatctatc gtttaggcga tgcagttaga gtaaaagtaa tcaatgtgaa tttagacgag
     3721 aaaaaaattg attttgagtt actcaccggt aataagaaaa ccggcaaaac cgccaagaaa
     3781 aaagcaaaag cgacagaggt tcctgttttc aaagagccta aaacggtaaa aaaagccaaa
     3841 aaagtcgctg agaaaaaacc ggcaaaatct gcaaaaaaac ggacaaaaac gaccgctagt
     3901 aaatcaagga aaaaatagca aatggattac aaaaaacaaa ttttattcag ccttttattt
     3961 gctttagtaa ttgcaataat aagctatttt ttgtttacct atatcccgtt tgattgtagc
     4021 gatctgagca aactcaacga ttcacaacgt ttagagtgcc gaactgccga atttctgggc
     4081 gtttattact ggctgccgca cactaccacg ctgtttttcg gctcggtgtt attatattgg
     4141 gcggtttatg gcatgatttc attagtgcaa gcagtgctca aacgctaaca agcagttttg
     4201 tttttgcaaa aagttgcaaa tctcatctga ataatccttc caagatcaaa ggtctatcaa
     4261 aaaagataga cctttattgt gtaaataaac taaaactcct tgatagatgt atcacatatc
     4321 tataaaattc cagcaattaa gtgggaaaaa gtggtaaatt gtggaacttt tccttaaatt
     4381 taacctcatt taaaaaggta aatcagtaaa atgtttcgtg gtgcaagttc aatcagcatt
     4441 gatagcaaag ggcggatcgc tattccgacc cgttatcgtg ccgagctatt ggaaaaacat
     4501 cacgggatct tagtttgcac tgtggatatc cgccagcctt gtttgttgct ttacccactt
     4561 cacgaatggg aaatggttga acagaaattg ttggcactat ctaattttga ccctgttcaa
     4621 cgccgtattc agcgagtaat gcaaggcttt gctaccgaat gtgaaatgga ttcggcaggg
     4681 cgaatactgc ttagccctac acttcgccaa cacgcacaat tagagcaaca aattatgctg
     4741 gttggacaat taaacaaatt tgaaatttgg caagataaac aatggcaagc acaaattgcc
     4801 gaagatcttg cttttggcag ttcggcagaa attttagact gcgaagcatt gaaaaacctg
     4861 tctctctagt aattggaaat tgagatgagc gagaacccaa aacatattac agtattattg
     4921 cacgaagcgg ttgacggctt ggcaattaag cctaacggta tctatattga cggtactttc
     4981 gggcgtggcg ggcattctcg cttgatttta tccaaactgg gcgaaaatgg gcgattaatc
     5041 gcaactgatc gtgacccacg agcgatagcc gaagctcaaa cgattagtga ccctcgtttt
     5101 caaattgaac atacggcatt ttctgccatt cccgaactgt gtgaacgaat ggggttggtg
     5161 ggcaaaattg acggtatttt attggattta ggtgtgtctt ccccgcagct tgacgaagcc
     5221 gaacgaggct ttagttttat gcgtgacggg ccgcttgata tgcgaatgga taccaccaaa
     5281 ggcttatcgg cagccgagtg gcttgcccaa gtttcggcag aagatttagc ttgggtattg
     5341 aaagaatttg gcgaagagcg ttttgccaaa cggattgcac aagcggtcgt ttcttacaat
     5401 aaatctgcaa atgaaaaaat cagccgcact ttgcagcttg cgcaaattat tgcggatgcg
     5461 gtgccgttta aagataagca caaacaccct gcaacccgtt cgttccaagc aattcgcatt
     5521 tttatcaatg gtgaattaga cgagctggaa aaagctttaa attccgcatt aacggtgtta
     5581 gcccctgaag ggcgtttgtc gattatcagc tttcattctc tagaagaccg aatggtgaaa
     5641 cagtttgtgc gtaagcatag taaaggaatg gacgtacccc gtggtttacc gattttagaa
     5701 gcagagctaa ccaaaaatat tccgctgaaa accattggca aagcgattat gccgagcgaa
     5761 gccgaaattg aagcaaatgc ccgctcacgc agtgcggtat tgcggattgc cgaaaaacgc
     5821 taacagtaaa tagggaagaa tatgtcgaac gaacgttatc cgttacatca aatcatcatt
     5881 gatgatatct ttagccataa caaagtggct cttttattgt tgattggtgt agtgatttca
     5941 gcagtggcta cgatttggat aacccaccag actcgtttat cggtgagcga acaagggcaa
     6001 ctgattcaag caaaccaaaa gttggaaagc caatatacta atctgcaatt agaagaaaac
     6061 agcagaagca gtcgggcaag agttgatgcc gccgctaaat cgttcggatt acagccgatt
     6121 aaaaaagagc aagaaattat tttagttgaa taaaaaatgg ttaaatcagt taaattaaaa
     6181 cgtaagcaag aagcccctgt cgcaaaagca gagcctcaac aagcagaagg taaaaaaaca
     6241 ccgagttttt tacctactcg ctttagagtg gttgtgtttt ttatgctatt aatggttggt
     6301 ggcttactag cacaaaccgc ctatattcag ctttttgact ctgaaagatt aattaaagag
     6361 gctaataacc gctcacttcg tactaaagaa ctccaattta cccgtggacg tattttagat
     6421 cgtaacgggc gttttctctc tattagtgtg ccaatgtact cattaacact tgacccgaga
     6481 gaatactttg atactaagct gcgtcgttct aacgaaagct ggcgtgcctt agcgattgaa
     6541 atggaaacat caaaaggtaa aattgaggca aacgttaata aatttattga aaagaaaaat
     6601 ttttcaaaag aaaaagtaga ttttgatcca cgttctattt taaatactaa aagtgaaggt
     6661 tattggactc agcttgccca agttacaggt ttggattaca acagtttaat agaaaaagta
     6721 cggaataacc ctagctcggt ttttttacgt ttagataacg aaaatttagt aagagaacgc
     6781 cagaaattcc aagcgttaag caaagaaatc ggccgttcct ataatgacat aatggacgag
     6841 ctttatagca aaaaccgcca gcgattcctt tacttatccc gtcatcaatc tgaagcgatc
     6901 agcgaatatg caaaagaact agatattgat gcattagtga ttaaagtcga atcacgccgt
     6961 ttttacccgc tggcagaaga atcttcacag ttgatcggtt ttactgataa agatgatatg
     7021 cacggttcgg aagggctgga gcgtagtttt gattccttac ttatcggcaa aaacggtaaa
     7081 caaattatcc gaaaagatgc caaaggcaat attgtggaaa atatccgttc ggagaaacag
     7141 tacgatccgc aagatgttat gttaagcatt gatgaagaat tgcagtctat ggtgtacggt
     7201 gaaatcaaaa aagcggtaca ggaaaataat gcggaatcag gcactgcggt tttggttgat
     7261 gtgcaaaccg gcgaaatttt ggcaatggca aatgcccctt cattcaaccc aaacaaacgg
     7321 gatagtttta aacctgaatt aatgcgtaac cgtgctatta ccgacacttt tgaaccgggt
     7381 tcaacggtga aaccttttac cgtattaacc gcattacaaa atggggtaac ttatcgtgat
     7441 gaagttattg gcactcgccc atttgtcgtc aatggacata caattaaaga cgttgctcca
     7501 agggacagcc ttacgcttac cggcatcttg caaaaatcca gtaacatcgg ggtcagtaaa
     7561 ttagccctca gaatgccggc aaatgcgtta gtggatactt acacgaaagt cggtttcggt
     7621 aaagacaccg gtttaggctt gggtgaacaa cgaggtacga acggtgatcg caaacgttgg
     7681 gcggatattg aacgtgctac cctttcctat ggatacggtt taaatgtgac cccattacaa
     7741 cttgcccgtg cttatgcgac tttaggaagt ttcgggctgt atcgcccact ttcgattacc
     7801 aaggtcgatc cgccggtgat tggcgaacgg gtgctaccgg aaaaaaccac ccgagatgtc
     7861 gtgcatatga tggaaagcgt tgcggctaaa ggcgaaggcg gacaccgtgc agcggtggac
     7921 ggctaccgtg tagccatcaa aaccggtaca atacacaaat tagaaaaagg taaatatgtt
     7981 gaaaaatata ttgcttatac cgcagggctt gccccggcaa gcgatcctcg ctttgcatta
     8041 gtggtattaa tcaacgaacc taaagcaggc aactattatg gtggctttgt ttctgcacca
     8101 ctgttctcac gcattatggg ttacacctta aaacaacgta atattaagcc ggataactta
     8161 acggaaaata cccaaagtgc cgtgcgtgaa attaaattag aacgccctat caattaaggt
     8221 tagctatgaa acgtttactc ccttttctga cagaacttga tgcttgggtg gaagaactca
     8281 ccgagctaaa acaaatgaca cttgatagtc gccaagttca agccggtgat ctctttgttg
     8341 ctttaaaagg acatcaagtc gatggcagaa aatttattcc gaatgcgata gaacaaggag
     8401 cagcaattat tttggctgag gctgatgaag atcaaccgga aattgagctt gatccgaaat
     8461 ttgcaaaatt taacctagat cgcaccgctt gttgcaaggt tgtctctgtt ccacgtctgc
     8521 caaaattgct ctctgaaatt gcaggagctc tttaccataa cccgtcacac aagctgactt
     8581 tagccggcat taccggcacg aacggtaaaa cgactactgc tcaattatta gcacaatggc
     8641 ataatttatt gggtgggaaa tcggcagtaa tgggtactat cggcaacggt ttgtacggac
     8701 aagtgcaaga agcggtaaat accaccggct ctgccattga aattcagcat aatcttgcga
     8761 actttgttga acttggagcg gatttttgtg cgatggaagt cagctctcac ggtttggctc
     8821 aatttagagc cgaagccttg gattttgatt tagcgatctt tacgaattta agccgagatc
     8881 accttgatta ccacaacacg atggaagagt atgcccaagc caaattccgt ctcttcaacg
     8941 aattaagcac caaagctcaa gtaattaacg ccgatgatga aatcgggcgt gaatggctga
     9001 cacaattacc aaatgcagtt gcggtaagca ccgatccgaa gtttgcaggc aaccaccaat
     9061 ttgtcaaagc cactgcggta aaatttaccc tacaaggggc aagtattgcg tttgaatcaa
     9121 gttggggcaa tggcgagtta catagccgtt taatcggggc tttcaatgta aataatctgc
     9181 ttaccgcctt tgccggactt ttagctcttg gctttgatat tcaagaactg gttaaaaccg
     9241 ccccgaattt agttggcgta gcaggtcgaa tggaatgcat taccgctcca aataagccaa
     9301 tggtaattgt ggactatgct cacacccctg atgctcttga aaaagcccta caagcggctc
     9361 gtttacattg cgaaggcgaa ctttggtgca ttttcggctg tggtggagac cgtgacgccg
     9421 gcaaacgccc attaatggcg acgattgccg agaaattaac cgataaagtg attgctacag
     9481 acgacaaccc tcgcaccgaa gataatcaaa agattatggc agatattgtg aaaggtttta
     9541 gtaaacccca acaaattatc cacaatcgtg aagaggcaat taaaaccgcc attgagcaag
     9601 ctaaagccac agatgtgatt ctaatcgcag gcaaaggtca cgaagattat cagattattg
     9661 gcacagagaa gttacatttt tcggatcagg aaacggcaag gaaatatctg ttttaatgtc
     9721 actttctttg cacaagcaaa gaaaagtgac agtgacaaat acaaaatgct cgtaattaat
     9781 tttataaaga aaaagataaa tcaatgataa aactaaccac ccaacaaatc gctgaaatcc
     9841 taaatgccaa attgatcggc aatggcgaaa ctgtggtaga aaccaccagc accgacaccc
     9901 gacaagcggt tgaaaacggc ttattttttg cattaaaggg cgagaacttt gatgctcatc
     9961 actatcttca aaatgcagtc gcacaaggtt gtgtagcggt tgtggttgag cgtgagtgtg
    10021 aaattgatgt accacaactt gtggtggcag atacccgttt ggcattgggg gaattggcga
    10081 aatggttaaa agctaagctg aacccgaaaa cggtagcgat gacaggttct tccggcaaaa
    10141 caaccgtcaa agagatgacg gcaaaaattc tgcaaaaaat gaccgcttgc gaacaggaag
    10201 tgctttatac ttttggtaac ttaaacaatg acttaggtgt accgatgacc ttgcttcgct
    10261 taaccgaaca gcataaatat gcggtcattg agctgggggc aaatcatatc ggtgaaatcg
    10321 cttataccac cgctatcgct cagcctgatg cctgcttggt gaataatgtg gctgcggcgc
    10381 atttagaggg gtttggttca ttagcaggcg tggcacaagc caagggcgaa atttatcgtg
    10441 gcttgaaaga aaatggcaaa gcgattgtca atttagcttt ttattatccg caatggcaaa
    10501 aagagattgg ctcacgggaa atgcaatctt tctcttatat cgggtcagat tcggattctt
    10561 acgcagatta ctgggcggaa gatgtagaac tgcatttaag cggttcacgc tttacgctac
    10621 ataccccaca gggcgaaatt gctattgatc tgccttattt gggcaaacat aacgtgagca
    10681 atgccttagc ggcaacttcg ctggcgatgt ctgttggggc aacgctagaa gcagttaagg
    10741 cagggcttga gcagcgttca atggtaaaag ggcgtttgta tccggtgcaa attaacgacc
    10801 actgtttgtt tattgatgac acttacaacg ccaatgtgga ttcaatgaaa tcggcgattt
    10861 ctgttttgga aaattatccg gcttatcgta tttttgcagt gggtgatatg gcggaattgg
    10921 gtgaagaaag tagcaaatgc caccaagaag tagcggattt tgccaaaaat gcagcattag
    10981 atttaatcgt gagctttgga aaagaaagtg cggtaatcag ccaacaggca gaacatcatt
    11041 ttaccgataa acagcaaatg gttgatttcc tactgccgat tattttgcaa aaaatcgaac
    11101 aaaaacaacc gcttgtatta ttggcaaaag gctctcgtag ccagaaaatg gaaaccgtga
    11161 tttccgaatt gtgtaaaccg tttaacctaa atttctaatt atttttaagg actaagcaat
    11221 gttagtttgg cttgcagaac tattggttca atataacaca gcgtttaacg ttgtctctta
    11281 tattactttc cgtgccatta tggcgttatt aactgcaatg ggaatcgggc tttggatcgg
    11341 gccgaaagta attcgccgtt tgcagatctt aaaatttggt caggaagtgc gtaatgacgg
    11401 accggaaagc catttcaaaa aacgtggtac gccaacaatg ggcggagtga tgattctcgc
    11461 agcgattggg gtgagtacat tgctttgggc agatctgcgt aattcctatg tttggttcac
    11521 gctgtttgtg ctatttggct acggtgcagt gggctttgtt gatgattatc gtaagatctc
    11581 tcgtaaaaat accgatggtt tgattgcccg ttggaaatat ttttggttat ctgctatcgc
    11641 attagtggcg gtgtttggta tgtatgcggt gggtaaagat accgctgcaa cacaattagt
    11701 cgtgccgttt tttaaagatg tgatgccgca actcggttta ttttatattg tgttatccta
    11761 tttcgtgatt gtcggcacca gtaatgcggt aaacctaacg gacggcttag acgggcttgc
    11821 gattgtgcca actattatgg tcgcatctgc ctttgcgtta attgcgtggg caaccggtaa
    11881 ctttaatttt gcacaatatt tacatattcc ttttattcca aatgccggtg aattggttat
    11941 tttatgtact gcgattgtgg gagcaggttt agggttctta tggtataaca cctaccctgc
    12001 acaggtgttt atgggcgatg ttggctcact ttcgctcggc ggtgcattag gcgtgattgc
    12061 agtattagtt cgccaagaat tattattggt ggtaatgggc ggtgtatttg tggttgaagc
    12121 cctctcggtg attttacaag taggttcata caaattacgc caaaaacgta ttttccgaat
    12181 ggctccaatt caccaccatt ttgaactcaa aggctggtct gaaccacggg ttatcgtgcg
    12241 tttctggatt atcacgctaa tgctggtttt agtcggctta gtaacattga aattacgtta
    12301 attgattgaa taaggtgcat tgagataatg taccttatgt tatttttaaa ttacagaata
    12361 aattatgcaa aaacaatacg aaaacaaaac cgttactatt atcggcttag gtacaacagg
    12421 gttatcttgt gtggatttct ttaagaaaaa aaatgccaat atccaagtga ttgacacccg
    12481 agcaaaccca gccggagcgg ataaattgga cgtaactatt ccgttgcata ccggtgggtt
    12541 aaacagtgaa tggttgctga aatctgatct tattgtaatt agcccaggtt tagccgttgc
    12601 cacacctgaa attcagcaag cgattcaagc tggtgttgaa atagtcggtg atgttgaact
    12661 gttttgtcgg gaagcgaaag ctccgattat tgcgatcacc ggttcaaacg gcaaaagtac
    12721 cgtaacgact ttaactaccg aaatggcgaa gcaagcgggg attaaagtgg gaatgggtgg
    12781 caacatcggt gtgccggtat taagtttgct ggagggcgat tatgaccttt ttgtgctgga
    12841 gctatccagc ttccagcttg agacaactta ttcactgaaa gcaaaagctg ccactgtttt
    12901 aaatattagc gaagatcata tggatcgcta cgattcgatt gccgactatc gccaagcgaa
    12961 attgcggatt tacgataatg cggaaaatat catcgtaaac ggtgaagatg cccaaactta
    13021 cccgatacaa gcggtcaaaa aagtgattcg ttttgcagaa caaaatgcgg aatatagcct
    13081 acgcaatcag atgctttatt caggcgatga tgcaattatc caaactaaac agatgctgat
    13141 tagcggccgt cataatgaga tgaatgcgtt agcggcgatg gcattagcag aagcggcgaa
    13201 tgttcctcgt gaaggcattg tgaaagcttt gcaaatttat ggtggtttgc cacaccgttt
    13261 ccaagcggtg gcaaccaatg atggcgtgcg ttgggtcaat gattccaaag cgaccaatgt
    13321 gggtagcacg gtagcggcat taaacggctt gaatattgcc ggtacacttt atttactttt
    13381 aggtggtgac ggcaaggctg cggatttttc cgaactcaaa ccattaatta ataagccaaa
    13441 tattgtctgc tattgtttcg ggcaagatgg agcggcattg gcagaattaa gcgaacaaag
    13501 tgtgttggtt gaaacgatgc agcaagcaat tgaagcaatc cgcccacaac tgaaaaaagg
    13561 cgatatggta ctgctttctc cggcttgtgc cagtttagat cagtttaaaa actttgagca
    13621 acgtggcgag gtatttatgg cattagcaca aggacagcac gcataatgtt agaaagaatt
    13681 aagtcggaat gggataaatg ggtcagatta accccttcta attcacttta tgacagaact
    13741 ctaatttggc tatttttagg cctgctaatt atcggttttg tgatggtaac atctgcttca
    13801 ctcccagtta gcacaaggtt gaataacgat ccattttatt ttgcgattcg agacgggctg
    13861 tatattattg cttcaattat cttttgttat gtttttgtac aaatcccaat tgaaaaatgg
    13921 gaaaagcata acttggcact gttttttatt tcaatcggtt ttttaatcgc cgtactcatt
    13981 ttcggccgct caattaatgg tgcagtgcgt tggattccgt tgggtattct caactttcag
    14041 ccggcagaat tagccaaatt agcggtcatt tgctattttg ccagtttcta tgtacgtaaa
    14101 tatgatgaaa ttcgtaaaga aaaagccagt ttctggcgac cggcagtgat tttattctta
    14161 ttcggcttct tgctgatttt gcagccggat ttaggtagta cctttgtatt atttgttctc
    14221 actttctcaa tgcttttcat tgtgggggca aaaattatgc aatttatgtt tttaggcgtg
    14281 gtgggaacgg tgttatttgc ggtgttgatt ttaacctcgg aataccgttt aaaacgtgtt
    14341 acctccttta tggatccgtt tgctgatgct tatggcgacg gtttccagct ctcgaactca
    14401 caaatggcat ttggacaagg tgaattttgg ggacaaggtt taggtaattc ggtacaaaag
    14461 ctagaatatt tgccagaggc acatactgac tttgtaatgg cggttattgg tgaagaattt
    14521 ggtttctttg gtattgcttg catcgtactt ttacttattc tattaacggt gagagcctta
    14581 aaaatcagta aagaatcttt ggtgctggaa gagcgtttta aaggctatat ggcatttggg
    14641 attgcgattt gggttttcct acaaggcttc gtaaacttag gggtggcatc aggtttgctg
    14701 ccaacgaagg gcttaacctt cccattagtg agttatggtg gttcgagttt ggtaattatg
    14761 tcgattgcga ttgcagtttt gctacgaatt gaccacgaaa accgtgccga gcgaatcggg
    14821 cacgcaaaaa ttaaaaccat ctagccgagc ggtctgcaac gttacaattt gcaaaatttt
    14881 acaaaaatga gaccgcttgt attagctgga aagcataaaa attcagtaaa atagcacgtt
    14941 ttagaataaa aaagagttga aaatggcgaa gaaattatta gtaatggcag gtggaacagg
    15001 ggggcacgtt ttccctgcaa ttgccgtagc tcgagagcta caaaaacaag gctggcaaat
    15061 ccgctggctg gggacgaaag accgaatgga agccactctt gtgccgaaac acggtattga
    15121 gattgatttt attgaaatct caggcttgcg gggtaaaggc gttgcagcat tgttgaaagc
    15181 accgtttgct atttttaaag cggtgatgca agcccgcaaa atcattaaaa attatcagcc
    15241 tgatgcggtg ttgggaatgg gcggttatgt gtccggtccg ggcggtattg cggctaaatt
    15301 atgtggcgtg ccggtgattt tacacgagca aaacgcagtt gccggcctaa ccaatgtgtg
    15361 gctatccaaa attgcccgca aggtgttaca ggctttccct actgctttta aagaggccga
    15421 agtagtaggt aatcctgtac gtgaagattt atctgctctt ccgctgccga atgaacgttt
    15481 cgccaaacga ggctacccga ttaacatttt agtaatgggt ggcagccaag gggcaagagt
    15541 gatcaaccaa accgtgccgg aagtggcaaa agtgttgggt aataatgtgt ttatcagcca
    15601 ccaagtcggt aaaggtaatt tagccggtat cgaagaagtc tatcaacaaa ccggcaatgg
    15661 gattgcttcc gagtttattg atgatatgaa agccgcgtat gagtgggcag atttggtgat
    15721 ttgtcgttcc ggtgcgttaa cggtgtgtga aattgccgcc gtaggtctgc ccgctgtgtt
    15781 tgtgccgttc caacataaag acaggcaaca atttttaaac gctaactatt tggcggcaga
    15841 tggagcagca gtgattatcg aacagagcga tttcactcca aaggcattac agcaagcctt
    15901 agaaccctta attgccaatc gccaactctt attggatatg tcaatgcgag ccagagcaaa
    15961 atccacccca atggcagcaa aacgtgtagc ggaagtgatt attcaagaag cgaattaact
    16021 tactacaagc ggtcgttttt ggtaaaaatt ttgcaaaatg taaccgcttg cgaatagatt
    16081 aaaaggacaa taaatgaaaa atttccaaga taaagtcaaa aaattagtgc ctgaaatgcg
    16141 tcgtgtcagc caaattcatt ttatcgggat tggcggagcc ggtatgagcg gcattgcgga
    16201 agtgttatta aacgagggat accaaatttc aggttcggat attgcagaca gagcggttac
    16261 acaacgtcta tccgcagccg gagcgaaagt ctttatcgga caccaagcag aaaatattgc
    16321 tggggcgagt gtggtggtgg tttctactgc gattgatgaa accaaccctg aaattattgc
    16381 cgctcgagaa gctcgaattc cggtgattcg ccgagcagaa atgcttgccg aaattatgcg
    16441 ttttcgccac ggcattgcga ttgcaggcac acacggtaaa accactacaa ccgcaatgat
    16501 ttcaatgatc tacaccgaag caaaattaga tccgactttc gtgaatggcg gtttggtaaa
    16561 atctaccggc aaaaatgctc atttgggggc gagccgttat ttaattgccg aagccgatga
    16621 gagtgatgct tctttcttgc acttgcagcc aatggtgtcg gtagtaacca acattgagcc
    16681 tgaccatatg gacacctatg gtggcgattt tgagaaaatg aaagagactt acgtacgatt
    16741 tttgcgtaac ttacctttct acggcttagc ggtaatgtgt gccgatgatg aaacggtaat
    16801 ggaaattgct cctcgtgtcg gcagacaagt gattacctat ggctttagcg aaaatgcgga
    16861 ttaccgaatt gaagattacc agcaaaccgg cttccaagag cattacaccg tagtttgccc
    16921 aagcggtgaa cgaattgatg tgctgttgaa tgtgccgggt atgcacaatg ccttaaatgc
    16981 aaccgctgcg ttagcggtgg caaaagaaga agggattggc aatgaggcga ttttagctgc
    17041 tttagctgat ttccaagggg caggacgccg ctttgaccaa ttaggttcat ttattcgccc
    17101 gaacggcaaa attatgttag ttgatgacta cggccaccac ccaactgaag ttgatgtaac
    17161 cattcaagcc gctcgttcag gctgggaagg taaacgtgtt gtgatgattt tccaaccgca
    17221 ccgctattct cgtacccgtg atttattcga tgaatttgta caagtactgt ctaaagtcga
    17281 tgccttgatt ttattggatg tgtatgctgc cggcgaagct ccgattgtgg gggcagacag
    17341 taaagcctta gcccgttcaa tccgtaattt aggtaaggtc gatccgattt tggtttcaga
    17401 taccgatcaa cttggcgagg tattagatca aattattcaa gacggtgatt taattttggc
    17461 acaaggtgcg ggcagtgtaa gccgcatttc tcgtggcttg gctgagagct ggaaaaatta
    17521 aatactctct ccccttgcgg gagagagacc gaaaaatact tcgttcagaa gtatttttca
    17581 gagagagggt atatatttaa aggatttcaa atgagtatta aaaacgaaaa aattgccgtc
    17641 ttattcggtg gcgtttcgca agagcgtgaa gtttcactga attctggtgc agcggtaaca
    17701 gctgcattaa aaagtttagg ctataacgta gaaggcattg atactaaaga attcccgatt
    17761 gaaaaattaa aagaaaaagg gattcagcgt gtatttaata ttttacacgg cggtattggc
    17821 gaaaatggcg tactgcaagg tgcgttagag caaatgggta ttccttacac cggttgtggc
    17881 gtaatggcat cagcagtgac gctggataaa ttccggacta aattattatg gaatgcagta
    17941 ggtttaccaa cagcggatat ggtggtggtt cagcgtggac aagcggtcga ttttgaccaa
    18001 attattgcaa aattaggctt accggtattt gtgaagtctt cgtgtgaagg ctcaagtgtg
    18061 ggtgtattca aagtaaaaac caaagaagaa ttggcaccgg caattcacga ggcattaaag
    18121 tttgattcca ttgtgttggt ggaagaattt ttagccggta atgaatattc tgtaccggta
    18181 ttagacggac aagttctacc ggcggtacaa gtaattccgg acggcgaatt ttatgactac
    18241 cacgcaaaat atgtgtcgga taacacccaa tatgtagtac cggcattaaa tgacgaacgc
    18301 caagcagagg tcgccaaatt agtgaaagcg gcttacgatg tggttggctg tcgaggttgg
    18361 agccgtattg atgtgatgga agatggcgaa ggaaaattcc gcttggttga agtaaatacc
    18421 aacccgggaa tgaccagtca cagtattttc ccaaaatcag cagcaacagt tggtatttcc
    18481 tttgaaaaat tagttgaacg cgtattggag ttaagtgctt aatgggcatc ttccgcaaga
    18541 agaacagcac aaatgtgcgt ttgaatgttc ttaatccaaa aacacctgtt tctccacgta
    18601 aatggctagt attcattaag ccattaattg tgttattatg tacactattt gtattcggtg
    18661 tgtatagtaa ttggcaaaat atactcgaaa gttgggataa aacaccgatt cgcgcttatg
    18721 cattaacaca taaaacacaa tttacaacaa atgcagatat tcgtgaaact ttgtctaaag
    18781 aacctgctct aaaaggatat ttcggacaaa atattcaaga ggtcaaagat aagcttttat
    18841 ctataccttg ggttaaagat gtggctgttc gtaaacttta tcccgaccga ttaagtatta
    18901 ctttgctaga acataaaccc gttgcaattt ggaatgatac taactttgtc tcagaacaag
    18961 gaaccgtctt tagtttaccg aaagacagaa tcgataaaaa tggacttcca ttactctatg
    19021 gtccagatac ggaaggaaaa agtgtattag aggcatggaa taaaatccga gctgatctaa
    19081 atgcccgcaa cttggattta acctccgttt ctgtagataa tcgaggttct tggacaatta
    19141 ggctttctaa tcaagtagaa ttaagattag gaagagggga atggacttct aaaattgatc
    19201 gttttgtaat aatctttcct gaaattcata tacctgaagg taatagatta gcttatgttg
    19261 atttacgtta tccacatggc gcggcggttg gatttagtcc tataaaaaat taaactcagt
    19321 gaacacaaaa acattatgac aaaagcagta gaatcaaaaa ttatcgttgg tcttgacatt
    19381 gggacatcaa aggttgttgc cgttgttggt gaagtattac ctgatggtgt aattaatgtt
    19441 atgggagctg gcgtttgccc ttctaaagga gtcgatcgag gtggcgttat tgatcttgac
    19501 gctgccgtta attctattca aagagccatt gagcaggcgg aatctattgc cgattgtcaa
    19561 attatgggtg taacactggc aatctcaggt cagcatattg ttggtttaaa tgaagcagga
    19621 tcatcaacat tatctggagg tattgttacc caagataata ttgaaagtgc tgtggatatg
    19681 gcaaaggcaa ttaaattaca agatggctta gaaacattac acatgattcc acaagaatat
    19741 cacgtggata gattgcctgc gactaaaaat ccaattggct tatcgggtat gcgtttacaa
    19801 gttcaagcac acttaattgc ttgccatcaa gcttggttaa aaaacttaaa aaatgcggtt
    19861 gaacatgcta aattaaaagt cgatcaagtt gtattttcag gtcttgcctc tagctattct
    19921 gttttaactg aagatgaaaa agagctgggt gtttgcttaa ttgatattgg tggcggtacg
    19981 atggatgtac tagtttatac cgatggagca ttaagataca gtaaagtcat tccatttgca
    20041 ggtaataaca ttactgatta tttggctcgt gtatttacga catctcgccc tgaagctgaa
    20101 agccttaaag taggttatgg tagcgcaatt tcgcctccaa cccataattc agataaaaaa
    20161 attgaggtgg caggactagg tggacggatg gcaagaacct ttacccgagc tcaggtggca
    20221 acggttacct cacaatgtta taacgatttg ctaaaagttg ttgaagagga attaacccaa
    20281 ttacgccatg aacttttcca aaaaggaata aaacaagagt taattgccgg tgtagtcatt
    20341 actggtggtg gctcacaaat tgaagatatt gtagaatgtg ctaaatcaat ttttggttca
    20401 caagttcgtg ttggatatcc actcaatatt actggcttaa ccgattatgt gaataaacca
    20461 caatatgcaa cagcattagg gcttttacaa tatagccact ataattatac tgaacaaggt
    20521 acaagtacag attctaatga agatatcttt gctcctattg gtcgtggaac caagaaaatc
    20581 attgacttct tcaaatcaaa attttaatag tgttaaaata aacacgcagg gagataaaaa
    20641 tgtttgaacc tattattgaa caaacgcaag atgctatcat taaggtagtg ggtgttggtg
    20701 gcggtggcgg taatgccgta gacagaatgt ctcgctctgc cgatgatatt aaaggtgttg
    20761 aattctttga tgtaaatact gatgctcaag ttttaagaaa aagaaccaca cgccaaacta
    20821 tccaaattgg agcaagtaca actaaaggtt taggtgcagg tgctgatcca atggtaggaa
    20881 aacaagctgc cgaagaagat cgtgaggcta tcgctaatgc attaaaaggt gcaaatatga
    20941 cctttattgc tgttggtatg ggtggaggta ccggtaccgg agcagcccct gttgttgctc
    21001 aaattgccaa agagcaaggc tcactaactg taggcgttgt aacaaaacct ttccgcttcg
    21061 aagggcctcg ccgtatgcgc tttgcagacc aaggcattaa agagctttct caatatgttg
    21121 attctcttat tataattcct aatgataaat tacgtggttt aggtaagcaa acaacagcag
    21181 tagatgcctt tgccgcagca aatgatgttt taagtaactg tgtgcttggt attaccaata
    21241 tgattaccag ttcgggcggt tctaccggtg cagatattaa cgtggacttc gcggatgttc
    21301 gtacagtaat gtctggtaag ggacacgcta tgattggtac aggttttgct gaaggtgaag
    21361 ttggtgaagg acgagcggaa aaagcaatga atgatgccat ttctagtcca ttacttgaaa
    21421 atgtggatat ttcaggtgca agtggtatgc tcatcaacat tagtgctggg acagatttct
    21481 tattagaaga agtttatgct atgatggact taatttatgg ctttgcaaca gaagatgccg
    21541 caattgtatt tggttgtaac tattaccctg aaatggatgg aaaagtgagt gtcactcttg
    21601 tcgcaacagg aataggccaa cctgaggaag ctctacatat gccacataag gctcagccag
    21661 tatatgcaca gcaaggaaat catgttcaag ctacacagcc tactcagcca aaccatgcgg
    21721 tacaacaacc aaactttact caaccgtcaa gttatggtca gccaaatcaa tttagtggtc
    21781 aaccacaacc actacaacaa cctgtggctc caaaaccaca atcggttgat acagcacaaa
    21841 tttttaaccc aaattcaatt ccgggtttta tgagaaatag tcaataactt ccactcattt
    21901 cggaagtaag gacaaaatat gactaaacaa agaacattaa aacaagcagc aaaagtaaca
    21961 ggtattggct tacatagcgg caaaaaagta accttaacgt tacgccctgc cccagctaat
    22021 acaggagtta tttatgcccg taccgattta gagcctgtcg tttatttccc tgcaagcgca
    22081 gactctattc gtgatacaca attatgcaca tgtatggtaa atgatgatgg tgttcgtatt
    22141 tcaacagtag aacatttaaa cgcagcaatg tcagcattag gcttagataa tgttattgtt
    22201 gaagtagatg cacctgaaat tccgattatg gacggtagtt caagcccatt tatctatctt
    22261 ttattagatg ccggcatcga agaacaagat gcaccgaaga aatttattcg cattaaagaa
    22321 acagtacgcg ttgaagaagg cgataaatgg gccgaattaa aaccatacaa taaaggtttt
    22381 aaattgaact tcactattga ctttgagcac ccattaatcc ccaaaaatgt agggagctat
    22441 tccattgatt tttctgctga gaactttatt cagcaactaa gtcgagcgag aacctttaca
    22501 tttatgaagg atgtagaata cttgcaatct attggtcttg cattaggtgg aagccttgat
    22561 aatgctattg tattagatga ttaccgaatt ctaaatgaag acggtttacg atttaaagat
    22621 gaactggttc gccataaaat gctggattcg ataggtgact tatatatgtg tggttataat
    22681 atcctaggtg aatttagtgc atataaatca ggtcatggcg ttaataataa attattaaga
    22741 gctgtattgg aaaataaaaa cgcttgggag tttgttacct ttgaagataa agcagaagtc
    22801 ccacaaggtt accaagtaca acaagaaatt tttatttagt ctaaatggct taaaagacga
    22861 acagaaatgt tcgtctttta ttttgcaaat tttttctaat atttaaccgc ttgcaacccg
    22921 cctcattagc gattttttcg cccttatcta tttactgttt aaaaaaacag ttgtactata
    22981 tacccataca gttaatcttg tgtggtgtat tatgcttact caacttacta ttaataattt
    23041 tgcgattgtt cgccatctta ttcttgaatt aaatgaaggt atgtctgtta ttaccggtga
    23101 aaccggtgcc gggaaatcaa tcgctattga tgccttaggg ctatgcttgg gttatcgttc
    23161 tgaaagtggg atgattagaa acggttcgga caaagcagat ataagtgcaa cctttactat
    23221 gcagccacat agccctgctt atttatggct acaagagcat gaactgcttg atgaagataa
    23281 tcctcaagag tgtatcttac gccgtatgat taatattgat ggacgctcaa aagcctttgt
    23341 aaataaccga tcattacctg tttcacaact tcgagagttg gggcaatatc ttattcattt
    23401 aaatgggcaa cacgcaccac aattactcct aaaaaacgaa tatcaacttg aaatagtcga
    23461 tcattatgcc acgttacagc ctctattgat gaagatggca aagcaatatg ggaattggaa
    23521 agaactgaat aagcaggtaa aaaatttcca aaaacagtgc caagaaaatg aagctcgcaa
    23581 acagctatta gaatatcaag ttgaggaatt agatgaattt gcaattaaag caaacgaatt
    23641 tgaagaaatg gaagagaaat acaatatctt gtcttcttcc gaggagctta ctgagctttc
    23701 agatgaaatc acacgcttat taagtgatga tgaaatcaat gcaaacagtc tgatttataa
    23761 agcgttacgc aatgcagaaa acttggctga ggttgatagc caatatcagg gcattttaga
    23821 tatgcttaat gaggccctga ttcagattca agaagcaagc tccgaagtgg ctcaattagc
    23881 cagtaaaatt gaacaagatc cggaattact acaggagctg gataatagaa ttgcacaaac
    23941 tatatcgtta gcacgcaaac accatattca accgaatgaa ttatggcaat atcacgcgac
    24001 attaaaagca gaactacagg aattactgga ttttgaagat aatgaagaac aactcattca
    24061 aaatgaaaaa caagcttacc aagagtgtat aacattagca gaagaaattt accaaaaacg
    24121 tctagatgcc acacataagc tctctgaaca agtaacaaaa caaattaaac acttagcaat
    24181 ggaaaacggt gagttcttta ttcatataga acataatctt gaaaaaatgt ctgcaaatgg
    24241 tgctgactat gtcgagttta atttacgcag caatttagga caacaacccc aaccactggc
    24301 aaaaattgct tctggtggtg agctatctcg catttctctg gcagtacaag tgcttaccgc
    24361 aaataaactt tctacgccaa ctattatttt tgatgaagtt gatgttggga ttagtggctc
    24421 tgctgccact acagtcggaa agctactgcg taagctaggc gaaaaatgcc aagtattatg
    24481 tgtaacccat ttacctcaag tggcaagtta cggcaaccag cagtttaatg tacaaaaata
    24541 tgtagaaaat aatcaaactg aaacgcaaat gacattactc acagaagcag agcgtattca
    24601 cgccttggct cgactattag gcggaagcga aatcaccgaa acggttttag ctaatgcaaa
    24661 agaaatgcta aatttagcga aaaataacga atagccaaaa agaaaaatcg catcaatgaa
    24721 tattgatgcg attatgaatt tggtggaggt aaacgggatc gaaccgatga cctcttgcat
    24781 gccatgcaag cgctctccca actgagctat acccccttaa tacaagcgga ataatatgct
    24841 ttccgcttga agatgtcaat ggctttaatc aagcaaggtg ttgattgatt aaaaactagc
    24901 tattcgcctg aataaactca atcgcttttt gtaagcgagc taaggttctt tctttaccga
    24961 ctaatttggc ggtgatatcc attgacggcg attgcccact tcctgttacc gctaaacgga
    25021 acggcatacc gactttgccc ataccaattt ccagctcggc agcggtttgg ttcattgcct
    25081 cgtggatatt ttccaccgtc cagtcattgc aagcggtcaa tttttccaat aattttgcaa
    25141 gtggagcaac ggcttcggct ttgaagtttt tagcagcagc tttttcgtcg taagccttaa
    25201 attcttgata gaaatagcgg ctgctttcgg caagctcttt taaggttttg caacgttcgc
    25261 ccagtacagg gataatttct tccaattttg gaccgcttgt gaaatcaatg ccttgagttt
    25321 gcatatgcca ttcaagatgt tttgccacat aacttggggc aagactgcgg atatagtgtt
    25381 ggttcaacca ttgtaatttt tcagtgttaa atgcacttgc cgatttactg actgaatgaa
    25441 tgtcgaacag ctcgatcatt tcgtcacgag agaaaatctc ttggtcgccg tgtccccagc
    25501 ctaaacgcac aaggtagtta attaaggctt ccggtagata gccgtcatca cgatattgca
    25561 ttacgctcac cgcaccgtgg cgtttggaga gtttttgccc gtcatcgccg ttgatcattg
    25621 aaacgtgggc gtaggttggg attggtgctc ctaatgcttt caaaatgttg atttggcgtg
    25681 gtgtattgtt gatatggtct tcaccccgca caacgtgagt aatgcccata tcccagtcgt
    25741 ccaccaccac acagaaattg taggtcggcg agccgtcagt acggcgaata atcaagtcat
    25801 ctaattcgct attggcgatt tcaattcgcc cacgcaccgc atcgtcaaat actaccgagc
    25861 cttcggtcgg gtttttgaaa cgcacaacat gtggttggct cgggtcgttt tgcggattgt
    25921 gtaagcagtg ctgatcgtat ttcgctttct ctttatttgc ttcttgctct gcacgtactt
    25981 cgtctaaacg ttctttcgag cagtagcaac ggtatgccgt gccggcttct aacatttggt
    26041 cgatcacttg gttatagcga tcgaaacgct tggtttgaaa gtatgggccg tgttcccacg
    26101 ccaaatccag ccattccata ccctctaaaa tagcggcggt tgcctcaggg gttgagcgtt
    26161 caagatcggt atcttcaata cgtaacacaa attcaccatc attatgctta gcatataacc
    26221 aagagtagag cgcggtcctc gccccaccta cgtgcaagta gccagttggg ctaggtgcaa
    26281 aacgggtacg gacttttaca ttcggatcta aggggaaaag ggtttcaatt ttcattttat
    26341 attgcctaat tgatgattct taagaaaaac ttgtctattt tactacgctt gagggtgaat
    26401 catagtaaaa aattaaattt gcggggtaaa aaatcagcaa acggggtaaa aagaacaaaa
    26461 agggtttgac gaaacagcaa aaatctctat aattcacttc cacaacagcg ggcgattagc
    26521 tcagttggga gagcacctcc cttacaagga gggggtcact ggttcgagac cggtatcgcc
    26581 caccacttca acttaagtgt ttcgttgttg tatcacaatc taattttgaa aacgggcgat
    26641 tagctcagtt gggagagcac ctcccttaca aggagggggt cactggttcg agaccggtat
    26701 cgcccaccac ttcaacttaa gtgtttcgtt ttcaaattcc ctttgatttt aagtctcaag
    26761 tgggcgatta gctcagttgg gagagcacct cccttacaag gagggggtca ctggttcgag
    26821 accggtatcg cccaccactt aagactaaaa tcataaactt caaatggcga tttttcgtat
    26881 ctgaagggcg attagctcag ttgggagagc acctccctta caaggagggg gtcactggtt
    26941 cgagaccggt atcgcccacc atctatttag tatcaaagcc taaaacttat atcataatct
    27001 aataacccct ttaaagtcat aactaaaaag ggaaaataaa ttcagatggc ctgttgcatc
    27061 tgcataaatg cctttctacg tgcagaaatt aatctttttc tatctttaat ttgcttaatt
    27121 tgacgcaggc gtaatttcct tgtcagtagg gatttctttt tcttcaattt tctcataaga
    27181 agaattctcc tgttttattt gaccatctgg taaattttct tgttcttgca tcttttgctc
    27241 ttcaactcgt tgataattaa taatactacc ataataacgc cgtatatttt caacatactg
    27301 taatgcttca tatcctcgag catagccgta ttttagatta gcataataac gtttttccgc
    27361 aagcaatggc agattctttt taacatcaag ccaattatcc ggatcaccac caagttgttt
    27421 tgttaatcga cgaagatcca acaagtgccc caatcccata ttatacgctg ctaggctata
    27481 ccaaattcta tctgcttgag gaatagtttc cggcatttgt ctcattagca tatgtaaata
    27541 ttcagatccc gctttgatac tttgtgcagg gttagtccta tcagaaattt tcattctatc
    27601 tgccgtatct tttgtcagca tcataattcc cctcactccg gttggagaag ttgcattagg
    27661 atcccaatga gactcctgat aggcgatagc cgccagcatt tgccattcta attcaccttt
    27721 atgtgcccga aaaaggggtt catatttagg taaaatagtt ttaattgcat tcaaatagct
    27781 ctgaatatca acataatcaa acttagctaa atgattaaaa tatttctctt ctattcttga
    27841 tatcagccca gtttccatag aataagacat aaaatccagc agcacagatt gcagttcact
    27901 ataagaacta tttgctaaat accataacac tgggttttca tcagttaaat caaaccctac
    27961 ggctaaatta ggattaatat gctgtgcagc agaaatatca accgacattg caattgtatg
    28021 tgaaatttca ccttgtgcga cttttaacaa tagctcttct tgtgtaaatt tatccgagat
    28081 ctgccatttt agttccggat tatccacctt aagctgattt aatattggaa ttaccgcaga
    28141 accggctgga ataatcacat tttcccgcaa atcggaaagt cgatatggtc tagcacttcc
    28201 ctttttataa acaagctgcc aagaagccga ataataggaa ggacctatct gaaattcatc
    28261 gtttaattca gaatggtaaa gcagcccagc ggcagcaata tcaacatcat tatttcttaa
    28321 ggcctcaaac aatttctcgc tactatcata agttttaata tcaagattga cctttaaata
    28381 ttgagcaaag gctgttgcta aatcatattc aatgccactt tttccttcag gaccaacaaa
    28441 gtaagaaagt ggatggttga tcattccaac ctttaacgtt ttgctttgct gaatttgtgt
    28501 ataatgattt gcttctgaat gaatgatttt ttgccaagga aaaatcatat cccaagccca
    28561 cagtaacaat gctacggcaa taaaaaggcg agcaattaat cctttcaatt taaaatcctc
    28621 attatttcaa gctaagcatt aagcctatct gaaattacaa
//
LOCUS       DANMCL010000025        28483 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.025, whole genome shotgun sequence.
ACCESSION   DANMCL010000025 DANMCL010000000
VERSION     DANMCL010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28483
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.025"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..944
                     /locus_tag="PXF40_000996"
     CDS             <1..944
                     /locus_tag="PXF40_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5802350.1"
                     /translation="GKIQINRNARPTGQYNLNNEELGAIKVPLIDLETQKQVDKIIKQ
                     SNDFVQKSTQSYQEAETLLLENLGLRAFQADSNPVNVKSLKESFLQTGRLDAEYYQTK
                     YEQYWNLIQSQDYVFIRDEYLHITQKPDWTKPMYQYIEIGDVNIGDGSYQTNWIETQE
                     LPANAKTQAQTGDILISTVRPYRGAVTIIGENDQDLVVSGAFTVLRRKENSVFNNEVL
                     KVLLRSELYKDWLLQFNVGTSYPVIKDNDILNLPIPKISGEIQEKIAEYIRQSNDLRQ
                     QAQNLLAQAKNNVEFEIENNSFNINELEVRGGGGRSC"
     gene            958..1692
                     /locus_tag="PXF40_000997"
     CDS             958..1692
                     /locus_tag="PXF40_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5802351.1"
                     /translation="MARSSYFARLAEWTLLEHLLVKQPENISVCSFGQSFGTSGRLDA
                     EYYQPKFASLFAQLANFKTMKLGEIVNLQKSVEPGSEAYQTEGIPFVRVSDLSKFGIS
                     QTDKYLHPKDFGNVVRPKKDSILLTKDGTVGIAYRVPQDLNVITSGAIVHLELKTDEV
                     LPDYLALALNSPAVQLQAERDAGGSIIQHWKPSEILDVVIPVLPKNIQQTISDKVQQS
                     FVLRVESEVLLEKAKILVEQEIENMR"
     gene            1695..2330
                     /locus_tag="PXF40_000998"
     CDS             1695..2330
                     /locus_tag="PXF40_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802352.1"
                     /translation="MPNHNQDLKKEWFNKARIDYHSPFLMLWLSCNSWYNFHYSLGKD
                     RTHIDRIKSDTSNQNKLYKEFERIFTSGKIKEKTNLWNNIEQLHFALVQAELKYSGSN
                     IPSEYSKFNLENVLIDFPNKTNSVAYQNLVIHNAKTRAGKLKTQYANAHDLGNLVLVE
                     DIQKIFSGLLEIIYQVRCHLVHGSLSPTPENHEVVKYCYLILWDCLKGFCD"
     gene            complement(2598..3335)
                     /locus_tag="PXF40_000999"
     CDS             complement(2598..3335)
                     /locus_tag="PXF40_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5802353.1"
                     /translation="MIKIENLTLAHGIQHLSCYLPKGKLIGIMGANGAGKSSLLKAIA
                     GILRPTSGEIWLENCKLHALSAVERSRQFAYLAQQLNVAWQLSVYDVIALGLPAPLPP
                     EQERQKVRSVAEQLAISHLLDNTYQQLSGGEQTRVQLARCLMKQAPILLADEPIAALD
                     PYYQIDIMQQLKALTPTQTCVVVIHHLPLAYRFCDEIILLKNGNLLVSGNTQAVLNAE
                     NIATAFGVKAEMDWEKREMWGIEKLEV"
     gene            complement(3332..4300)
                     /locus_tag="PXF40_001000"
     CDS             complement(3332..4300)
                     /locus_tag="PXF40_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5802354.1"
                     /translation="MKKLNIVLGSLLLLIVSNAAFYQLSDFALLKNAEGVLSDLRWLV
                     LGEIRLPRIGLAVLTGASLALAGNAMQGVFKNPLASPGLLGSSSGATAVSVFLLYYFS
                     APMGWLLFGGVAGALGAFLLVWLISFRHGTTMMILSGVAVNVLLGAAVTLLLSNAESP
                     WALAELYRWLQGSLVWATAEAVCWALPLILLGIVCLYRERRYLDLLTFGEETAATMGI
                     NLQRSFFTVSIGVALLVGATIPQTGTIGFIGLIAPHLARIWLKKPPSQLYLTSALIGA
                     LLLLIADLAVQYVPFFARIYIGTLTAILGVPFLIWILFTQQWRLAQ"
     gene            4481..4816
                     /locus_tag="PXF40_001001"
     CDS             4481..4816
                     /locus_tag="PXF40_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5802355.1"
                     /translation="MYHIERTEIFDQWLENLKDPLAVVTIARRIERAESGNFGDTKYI
                     AEGISEMRLNVSKGYRLYYAQKGSIIYILLNGGHKGTQQADIDKAKMLWAEIKQHMAE
                     QEKKNERII"
     gene            4800..5123
                     /locus_tag="PXF40_001002"
     CDS             4800..5123
                     /locus_tag="PXF40_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5802356.1"
                     /translation="MNELYDAPIPQATREKFGIQPFDAAEYLANDELIALYLAETLKD
                     GTDEEFIQALNTVARAKGMNELAKKAGIGRESLYQSLSSSKPRFETIRKIISALNLEL
                     SVVKA"
     gene            complement(5113..6999)
                     /locus_tag="PXF40_001003"
     CDS             complement(5113..6999)
                     /locus_tag="PXF40_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5802357.1"
                     /translation="MTQLDSVTVYSAYATPINQDKTASSVTVLTEKDFAARNATYVSD
                     VLKTVPGVAIGQQGGRGTLTSLFLRGAESRHTAVVIDGVKVNPINIGNFDFGGLPISN
                     IERIEVLRGEQSALWGSSAMGGVVYITTKSGLYKEKPFNAEVDLGLGSNNTRDASATL
                     SGFHNGFYYALHGDSHRTKGISALSKNHFSYTTETGSEVKTGGASERDGFHRDNGSLR
                     LGYDLGNKGVEVLAAQSSQTVHIDGYNSDVSGEYSRTRNQTFKLGGYWGNEQELLKHQ
                     ANISQFNSKATHFGSNARYSNEKQLNANYQLDVNFDREGEVTQAVSLLTDYAKTRYTS
                     DKYLREKTLSEKSAALEYRLFTEQDHSFSISGRYTDNSQFKNSITGRISGAYRLSPNL
                     CSDRLLLELAEPQQIRAMSPYSQKPLMMLDKLNTDKPTVEPELTALLPYADSTILLNE
                     TFYPQLTARLKQLGFKLVALNDSPQTPEQLFTLILQLGELTQNQAKAEKLVERLRLQK
                     IPLKQPLAETLILSETGMIEPHFPQYQTLLDLLGLSPLKSDLTPQNFSLEKLLLAQPK
                     QLLFLTDNQSYNNQAELLKHPALQKIWQKMSQNPPLVLPMKYTYCFDHGVWQGIQLMH
                     KLTP"
     gene            7029..7829
                     /gene="metF"
                     /locus_tag="PXF40_001004"
     CDS             7029..7829
                     /gene="metF"
                     /locus_tag="PXF40_001004"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HDL5802358.1"
                     /translation="MQQKWRMLWDSIDRLSPLKPKFVSVTYGANSGERDRTHSIVKSI
                     QEKTGIISAPHLTGIDATPEELKVIAKDYWDSGIRRIVALRGDIPKGYDKALFYASDL
                     VALLKSVADFDISVAAYPEVHPEAKSAQADLLNLKRKIDAGANHVITQFFFDVESYLR
                     FRDRCVSIGIDCEIVPGILPVTNFKQLQKMAAVTNVKIPTWMGKMYEGLDDDQTTRNL
                     VAASIAMDMVKVLSREGVNDFHFYTLNRSELTYAMCHTLGVRPDLTTA"
     gene            complement(7878..9038)
                     /locus_tag="PXF40_001005"
     CDS             complement(7878..9038)
                     /locus_tag="PXF40_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802359.1"
                     /translation="MKKSILLILSLFSASLFADVQLSPLPLPQIGKVSQFDLSEQGEL
                     VVINQQKQLWRVTQQAQKLADGVSTEIEPKAQYQRIALADQNGHFMLWTADKIYTSNI
                     PLAPKATMTALNFATIAVTKQNGQFKLARIETQGNQATITATAETEVLPDAHPLQIDF
                     DAETPNQGHIAVLAKPDDFTYQHGVLGDDVEAGEIQFLERHTLNPLAEKLTQQGRVFE
                     ANRWATFTENGKTKIVSVISGDGNGASTVVIGVKDGKLSIEAESEPLSTNRWQSPFIF
                     NRKLYAIQMPHLKGNLVEYSLKGNQLAERFITSGLSNHRYGDHETNLVATTETFALIP
                     QMGYQQVVVLDKTGKITELPTALPAGIKQTKADSNKAYLLLKNGEIWVAEEK"
     gene            complement(9098..10114)
                     /gene="galE"
                     /locus_tag="PXF40_001006"
     CDS             complement(9098..10114)
                     /gene="galE"
                     /locus_tag="PXF40_001006"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HDL5802360.1"
                     /translation="MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERV
                     KQITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGESVREPLRYYQNNVT
                     GSIVLVEEMLKANVNTIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERIL
                     EDTVKAFPQLSAVVLRYFNPVGAHESGLIGEDPNGIPNNLMPFISQVAVGKLPQLSVF
                     GGDYNTHDGTGVRDYIHVVDLALGHLKALDKHQNDAGFHVYNLGTGTGYSVLDMVKAF
                     EAANGITIPYKVVDRRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNWQKNNPN
                     GYKG"
     gene            complement(10202..10363)
                     /locus_tag="PXF40_001007"
     CDS             complement(10202..10363)
                     /locus_tag="PXF40_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HDL5802361.1"
                     /translation="MNETLLNNLVCPVSNEKLEWDKENNRLINPKLNIAYPIKNGIPE
                     LLPEAGVAL"
     gene            complement(10341..11342)
                     /gene="lpxK"
                     /locus_tag="PXF40_001008"
     CDS             complement(10341..11342)
                     /gene="lpxK"
                     /locus_tag="PXF40_001008"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HDL5802362.1"
                     /translation="MKIWQTKSLITWLLSPLSLLFWLISQARKRLYSLNILQSYRSPL
                     PMLVVGNISVGGNGKTPVVVWLVEQLQQRGVKVGVISRGYGGKAKTFPQLVTRESSAE
                     MVGDEPVLIVQRTNVPLAISPNRQQSIELLLNQFEPDIIITDDGLQHYALQRDMEWVV
                     VDGVRRFGNGFVLPAGGLRELPSRLNSVQAVICNGGTPQANEHLMTLEPSDAINLVTN
                     QRKPLSEFTQPCVAIAGIGHPPRFFTMLEKLGIPLAKTQGFADHQAFDKAQLAQFADS
                     QTPLLMTEKDAVKCHDFAQPNWWYVPVSATFSEKSTACLLAPILQKLGKEDERNTTQ"
     gene            complement(11344..11748)
                     /locus_tag="PXF40_001009"
     CDS             complement(11344..11748)
                     /locus_tag="PXF40_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802363.1"
                     /translation="MKVHEKIKLLRENNHWTQDEMAQKLSMTTKGYAKIERGETISNL
                     PKIEQIAEVFNMDICELLSYGEEGKIYINNTDNNLTNSFISLGNGVEEIQRLQLIISH
                     KDELLAHKEEIIENQKRELALLRDLVETLKNK"
     gene            11883..12065
                     /locus_tag="PXF40_001010"
     CDS             11883..12065
                     /locus_tag="PXF40_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802364.1"
                     /translation="MNNQYNPLYGMLGILASAASVILPLYAAYKDYQFGENMLSLMDI
                     IIFPLGIVRGLMYLFG"
     gene            12069..12398
                     /locus_tag="PXF40_001011"
     CDS             12069..12398
                     /locus_tag="PXF40_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802365.1"
                     /translation="MKKYLFFAFMTLSNVAYPNLDEWYSASDKERREFIAKHFAEETV
                     RSDRNTPYDYAMCTGRMFAKQLTRDEVKDYPLANTKPQYLTRDRRIEIMSNLPREILQ
                     NCAKYIQ"
     gene            complement(12434..13186)
                     /locus_tag="PXF40_001012"
     CDS             complement(12434..13186)
                     /locus_tag="PXF40_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HDL5802366.1"
                     /translation="MAYKPPFTVTTKMLNLVVEISHKLGTLQLDFERNLHLRKNNRLR
                     SIQASLAIEANSLTIEQVTAIIKGKKVLGHPKDIREVKNAYDAYDEMMHYNPYSIKDF
                     LKAHKFLTADLVNDAGAFRSKDVSIYNFSGQLVHMGARPQFVENLINELFSWAKQDDT
                     PALIKSSVMHYEIEMIHPFSDGNGRMGRLWQNVLLAQWNPLFAWLPIETMVYENQQRY
                     YQMLSLADSQNDSTGFIEFMLEMILETLLKLK"
     gene            complement(13225..14472)
                     /gene="clpX"
                     /locus_tag="PXF40_001013"
     CDS             complement(13225..14472)
                     /gene="clpX"
                     /locus_tag="PXF40_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HDL5802367.1"
                     /translation="MAFEKEPHCSFCGKKRTEVDQLVEGTEGYICNECIEESYALLHG
                     EEEPLIDENQDDEGSFFTNVPTPHELHAHLDDYVIGQEHAKKVLSVAVYNHYKRLRSA
                     LSNHQATNGVELGKSNILLIGPTGSGKTLLAETLARRLNVPFAVADATTLTQAGYVGE
                     DVENVIQKLLMKCDFEAEQAERGIVFIDEIDKITRKSESASITRDVSGEGVQQALLKL
                     LEGTVANINPQGGRKHPKGETIPVDTSKILFICGGAFAGLDKIVEARTNTQGGIGFAA
                     ALKKDKDRQDLTELFKQVEPEDLVKFGLIPELIGRLPVVTPLQELDEEALIQILTEPK
                     NAIIKQYQALFEMEGVELHFTKDALISIAQKAISRKTGARGLRSIVENLLLDTMYDLP
                     TLNAKKVTIGKGCVENGDKPKVE"
     gene            complement(14472..15065)
                     /gene="clpP"
                     /locus_tag="PXF40_001014"
     CDS             complement(14472..15065)
                     /gene="clpP"
                     /locus_tag="PXF40_001014"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HDL5802368.1"
                     /translation="MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLI
                     VAQLLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAF
                     LLSAGAKGKRFALPHARIMIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQ
                     SYEKVLADTERDNFMSAEEAAEYGLIDKVLTSRSEVA"
     gene            15177..15560
                     /locus_tag="PXF40_001015"
     CDS             15177..15560
                     /locus_tag="PXF40_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HDL5802369.1"
                     /translation="MTLTEIYQKFERCKSWEERYRLLIQLSRLLPKPSEQELAQIAEI
                     EGCESRLWFEFQAEPRKVVAYSDARLMQGILFIVSVALTEKTAEELKGFDLKTMFDEL
                     KISQNLTSTRLNGLGQLQKHIMMNL"
     gene            complement(15664..15740)
                     /locus_tag="PXF40_001016"
     tRNA            complement(15664..15740)
                     /locus_tag="PXF40_001016"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(15704..15706),aa:Asp,seq:gtc)
     gene            complement(15829..16584)
                     /locus_tag="PXF40_001017"
     CDS             complement(15829..16584)
                     /locus_tag="PXF40_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5802370.1"
                     /translation="MKKSIYDTPIFFERYQQLRQNPISMNEVVEKPTMFSLLPDLTGK
                     KVLDLGCGTGVHLAHYLTLGAEKVVGLDLSELMLQQAESDLSAHWQKGNDFSLYCLPM
                     ERLNEISEGDFDVVTSSFAFHYIADFSELLAKISQKMTACGTLIFSQEHPIVTCYREG
                     YRWEKNQEKQQVAYRLNYYREEGERDRSWFQQPFKTYHRTMATIVNNLIQGGFEIVQM
                     EEPMLAGQPRWHNEFKDLQHRPPLLFIKAIKQK"
     gene            complement(16644..17639)
                     /gene="trpD"
                     /locus_tag="PXF40_001018"
     CDS             complement(16644..17639)
                     /gene="trpD"
                     /locus_tag="PXF40_001018"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HDL5802371.1"
                     /translation="MQALLDKLFANQALAQAESHRFFSEVIKGNVSNEQLAAALIALK
                     LRGETVDEIAGAAKAALENANPFSTPDYPFADIVGTGGDGHNTINISTTSAIVAATMG
                     YKIAKHGNRSVSSKTGSSDVLSHLGINVDVSPETARLALDETNICFLFAPTYHSGFKY
                     AAPVRQALKTRTIFNILGPLVNPAHAKRQLLGVYSPELVKVYAETVKALGYEHTIVVY
                     GAGLDEVAVHGETQVAEIQNGQIDYYTLTPEDFGIERHSLEDLKGGEPAENAEKVTAI
                     LQGKGKLAHIDAVAANVALLMKTFGEDDLKANVQKVKETLESGKALETLRKLSTY"
     gene            complement(17657..18043)
                     /locus_tag="PXF40_001019"
     CDS             complement(17657..18043)
                     /locus_tag="PXF40_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005543439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tautomerase family protein"
                     /protein_id="HDL5802372.1"
                     /translation="MISVYGLKQTLADRRALIADVIFDCMQMSLGVPKQRHALRFDLL
                     DAENFYPPINRSQDFIVIEINLMQGRSEQLKKRLIKGLFSALHTKVGIVPMDVEITIK
                     EQPEHCWGFRGMTGNEATDLEYQAHR"
     gene            complement(18036..18626)
                     /locus_tag="PXF40_001020"
     CDS             complement(18036..18626)
                     /locus_tag="PXF40_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HDL5802373.1"
                     /translation="MANILFIDNFDSFTYNLVDQFRELGHQVTIFRNDYPLEDFLAKA
                     ETTENCLVALSPGPGNPAEAGNLLEIIRRLKDKVPMIGICLGHQALIEAFGGKVVHTG
                     TVLHGKVSRIEHDNQAMFSGINNPMLVARYHSLMGDELPAEFIVNAKFEHIVMAIRHK
                     TLPICGFQFHPESILTVQGTKLLKQSVEWLLGEKND"
     gene            complement(18636..20192)
                     /gene="trpE"
                     /locus_tag="PXF40_001021"
     CDS             complement(18636..20192)
                     /gene="trpE"
                     /locus_tag="PXF40_001021"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HDL5802374.1"
                     /translation="MPQLTITQTELPYFADTTRVYYALCGERPHTLLLDSAEIQSKNS
                     VKSLLFAKSAVHIFCEDQTVTFHALTPNGEAVLPLIANALSLLNPAPTCKFLDKNDRL
                     QAIFPTISNQLDEDSKLKTTTVFDGLRTVSQLFADSTSPIYLGGLFSYDLVANFIPME
                     NISLQDDGLSCPDYTFYLAEQLVTIDHQTETAVLNTFCFEPNEQTNLNQQAVEFTQKL
                     ANLSHIELPLANQTATSEATANIEDEDFKAIIRKLKHHINIGDVFQIVPSRRFSLPCP
                     NTLASYKQLKINNPSPYMFYMQGENFTLFGASPESALKYSQANRQLEIYPIAGSRPRG
                     FDEQGNIDPELDSRLELELRLDQKELAEHLMLVDLARNDVARVSESGTRRVVDLMQID
                     RYSQIMHLVSRVIGTLRKDLDALHAYQACMNMGTLTGAPKIKAMQLIYQVEQQKRHSY
                     GGAVGYLTSDGNLDTCIVIRSAFVQNGIAYVQAGCGEVLDSDPQLEADETRHKARAVL
                     KAIGQVNAKA"
     gene            20334..20951
                     /locus_tag="PXF40_001022"
     CDS             20334..20951
                     /locus_tag="PXF40_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HDL5802375.1"
                     /translation="MTQFFYIHPDNPQQRLINQAVEIIRNGGVIVYPTDSGYALGCAM
                     GDKHAMDRIVAIRKLPENHNFTLVCSDLSELSIYALVNNQAYRLIKNNTPNPYTFILP
                     ATKELPRRLMTKRKTVGIRVPDNAIALALISALGEPILSCSLMLPETEMTESDPDEIR
                     DHLQNRVDLIIHGGYLGQQPTTVVDLTDDVPVIIREGSGDPTSFN"
     gene            21097..22164
                     /gene="rluB"
                     /locus_tag="PXF40_001023"
     CDS             21097..22164
                     /gene="rluB"
                     /locus_tag="PXF40_001023"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HDL5802376.1"
                     /translation="MTTFQKKSTATFRADKRGESRPSFKKEEQKSERKFGKTSEKPPR
                     PTSKPLTQRIAKKVEKTTASEVASQEKKAKVVGEKLQKILARAGQGSRRELEEIIAAG
                     RVSVDGKMATLGDRVQVSSSTKIRIDGHLVNLMPAQKEICRVLMYYKPEGELCTRSDP
                     EGRSTVFDRLPRLSGARWIAVGRLDINTSGLLLFTTDGELANRLMHPSREVEREYSVR
                     VFGNIDDAMLQRLRKGVQLEDGPANFKQIKVVGGTGLNQWFDVTLTEGRNREVRRLWE
                     SQGVEVSRLIRIRYGNIKLDKGLPRGGWEEMGLEQVNYLRELVGLPPETETKVEVGVN
                     RRRTNIRQIRKAVKQHQKYRG"
     gene            22230..24002
                     /locus_tag="PXF40_001024"
     CDS             22230..24002
                     /locus_tag="PXF40_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HDL5802377.1"
                     /translation="MSWDIVATLAVTGIAVFLFATEKMRMDVVAILVLCSLVLLGQVD
                     TKSALSGFSNSATVTVTAMFVLAAGLQNSGALDSVGSLLAKVKSPWLFLLVLCGVNAA
                     VSPFVNNTAVVAVLIPIVIAAAQNIKMAPSKALIPLSFSSQMAGVCTLIGTSTNLLVN
                     AIAQKQGHSGFGMFEFAPLGIIFLVVGVAYLLVTSRFLLPESHLQLEDGEGFGKYVSE
                     LKVNKDSVLIGKSTFESGLNEEFNLFTIGVLRDGERLSTPSHQVLQKHDILLLRGESE
                     NLAKVREKYGLHHVVYGRRENDEDNLDEDLMVAEVMISPISRWIGGTIPILQQRWNKN
                     ATVLGIQRQSKVIRERLRTTAFKMGDILLLTLPKEDMETLRQDKDFIVLSSDLVKTEE
                     SWKSKFALGVMVLVVATAALGWVPISVSALIGAVAMCVAGCLTAEEAYQSIDWKIILV
                     LAGLLPLGEAMANSGAAQFIVDNTLGKVGEFGPLVVLAVLYLLTMVLTEFMSNAGTAV
                     LLTPIAVSTAKMLGVDASPFIIAVMFAAATSFMTPVGYQTNTMVYGAGGYKFTDFIKI
                     GLPLNVIYWILGIVLIPIFFPFNP"
     gene            complement(24092..28243)
                     /locus_tag="PXF40_001025"
     CDS             complement(24092..28243)
                     /locus_tag="PXF40_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5802378.1"
                     /translation="MNKIYRIVWNHAKRTWIVASELSRSANKSNATNTSLTTNIIKLS
                     TLSLALSAGFASAATYSPTYGTIPDNNPQTSIAIGDGSKVNSTLVSTITGLEGNSGKV
                     STALGYNTTATADFSTALGGFANASFASTAVGGQATADKRSVAVGYNATAMGLREVFI
                     GDHAGLNHSNSTEYNIGIGYSASSNVTGNNTISIGNTAGDGTSGSHNIAIGTYANAKL
                     AGPTTNVTSDDNIAIGNSALANGVNNYKTTAATGETVIGKATAVGSHANATGIVSSAY
                     GAEANATAIHSTAIGAKSQANGDNSTAIGYEAKTSGHGATSLGYYANATANLTTAVGT
                     NAGATSDYASAFGREANASGGSATALGNRATASGAASVALGVSAKATNQRTIAIGESS
                     NASAFNATAIGRNATAEHTDSIALGSNSVTAIAIPTTNATVNGITYSDFAGTNPIATV
                     SIGAEGKERTITNVAAGRISLSSTDTINGSQLYLTQQAIGNVAATTANILGGGAAVTE
                     NGNITFPTYALVNGTPDADKEGKQGRYTTVSAALSALNTAVISPLTFAGDTGTNFERH
                     LGSTVKIKGGSTGILTENNIGVVADGNSTLTIKLAEKVNLGANGSLTTGDTVVNNTGI
                     TIANGVADKPVSLTKSGLDNGGNKIANVAAGDVDTDAVNVSQLKQAISKFATHYVSIS
                     DDGIQRANYDNSGSSGVNPMAIGVATSANGELATALGSEAEANGERTTAVGPRATADG
                     MNATSIGYNANANATNALAVGSAANANADTSTAIGTASTATATRATALGSKSEATGEN
                     STAVGYEASSIGADSLAAGYNANASGTQSTALGNSANAGGIWSTSVGRNANAAGSSAI
                     ALGNSANAAGVASIALGVSSQATTTAAVALGQNAKATHQGSVALGTNSETVATVATKS
                     ATLNGNTYTFAGTTPSSTVSIGSVGNERTLTNVAAGRILDSSTDAINGSQLYAAYTEI
                     DGLNTKVNELSNGALTFVDDAGTEIVRKLGTSLNVKGGADATILTDNNIGVVATDANT
                     LTVKLAKDIDLTPAGSVAVGNSKLNNNGLTINNGPSVTMTGVDAGKLKITNVADGDIS
                     PISADAVNGSQLYDTANTIATALGGNSSVNANGAVSAPSYTVVDGAPTNEVSKTVNNV
                     GSAITALNDAVTSPLTFAGDTGTPSQRKLGSTVTVKGGVSNESQLTDNNIGVISNGNG
                     SLTVKLAKDIKVNSVTAQTVTANIAVADTVKTGDTTIDTNGLTIVGGPSITKTGINAA
                     GTKVTNVKAGTEDTDAVNFSQLKATEKNINNKINNIDSKVNKVDKRLRAGIAGATATA
                     GLPQAYLPGKSMLATAGDTYRNEAAIAVGYSRISDNGKVIYKLTGNSNTRGDFGGSIG
                     MGYQW"
BASE COUNT         8027 a         5751 c         6088 g         8617 t
ORIGIN      
        1 atggaaaaat ccaaattaac cggaatgcac gcccaacagg acaatacaat ctgaataatg
       61 aggagcttgg tgcgattaaa gtccccttaa ttgatctaga aacacaaaag caggtagata
      121 aaatcattaa gcaaagtaat gattttgtac aaaaatcaac acaaagttac caagaagctg
      181 aaactttatt attagaaaat ctcggtttga gagcttttca agctgatagc aatcctgtaa
      241 atgttaaatc cttaaaagag agtttcttac aaacaggacg attagatgca gagtattatc
      301 aaactaaata tgagcaatac tggaatttaa ttcaatcgca agattatgtt tttattcgtg
      361 atgaatattt acatatcacc caaaaacctg attggacaaa accgatgtat caatatattg
      421 aaattggtga tgttaatatt ggtgatggtt catatcaaac gaattggata gagacacaag
      481 aattacctgc taatgctaaa actcaagccc aaacaggtga tattttaatt tcaaccgttc
      541 gcccttatcg tggtgcagta acaattatcg gtgaaaatga tcaagattta gttgttagtg
      601 gtgcgtttac agtattacgc agaaaggaaa actctgtttt taataatgaa gttttaaagg
      661 tgctattacg gtcagaacta tataaagatt ggttactaca atttaatgta ggtacgagtt
      721 atcctgtaat taaagataac gatattttga atttaccaat tcctaaaata agtggagaaa
      781 tccaagaaaa aattgctgaa tatatccgcc aaagcaacga tttaaggcag caagcacaaa
      841 atttactcgc tcaagctaaa aataatgtag agtttgaaat tgaaaataat tcatttaata
      901 tcaatgagtt agaagtgcgg gggggggggg gtagatcctg ctaagcctta tggtttattg
      961 gcgagatctt cttattttgc acgtttagca gaatggactt tattagaaca tttacttgtc
     1021 aaacagcctg aaaatatttc ggtatgttca ttcggtcaat cattcggtac aagcggtcgt
     1081 ttagatgcag aatattacca acctaaattt gcaagcttat ttgcacaatt agccaatttc
     1141 aaaacgatga aattaggtga gattgttaat ttacaaaaat cggtagaacc gggctcggaa
     1201 gcttatcaaa cagagggaat accctttgtg cgtgtatcgg atttatctaa attcggcatc
     1261 agccaaacag ataaatactt acatccgaaa gattttggca atgttgtaag acctaaaaaa
     1321 gacagtatat tactgactaa agacggcaca gtcggcattg cttaccgtgt tccgcaagat
     1381 ttgaatgtga ttacatcagg ggcaattgtg catctagagc ttaaaactga cgaagtttta
     1441 cccgattatt tggcgttagc attgaattct cctgctgtac aattacaagc ggaaagagat
     1501 gcgggaggct ctattatcca acattggaaa ccgtctgaaa ttttagatgt agtgattccg
     1561 gtattaccta aaaatatcca gcaaaccatt agcgacaaag tacaacaaag ttttgtattg
     1621 agagtagaaa gtgaagtttt actggaaaaa gctaaaatac ttgtagaaca agaaatagaa
     1681 aatatgaggt aataatgcct aatcataatc aagatttgaa aaaagagtgg tttaataaag
     1741 caaggataga ttaccactct ccttttttaa tgttatggct cagttgtaat agctggtata
     1801 acttccatta ttccttaggt aaggatagaa cacatattga tagaataaaa tcggatacca
     1861 gtaatcaaaa caaactttat aaagagtttg aaagaatatt cacctctgga aaaataaaag
     1921 aaaaaactaa tttatggaat aatattgagc aacttcattt tgcattagtt caggcagagt
     1981 taaaatattc aggtagcaat attccaagtg aatattctaa atttaacttg gaaaatgtgc
     2041 ttattgattt tcctaacaag acaaattctg tagcatatca gaatctagtt attcacaacg
     2101 caaaaacgcg tgcaggaaaa ttaaaaacac aatatgcaaa tgctcacgat ttaggcaatt
     2161 tggttttagt agaggatatc caaaaaatat tttccgggtt attagaaata atttatcaag
     2221 ttcgttgcca tttggtacat ggtagcttaa gtccaacacc tgaaaaccac gaagttgtta
     2281 aatattgcta tttgattttg tgggattgtt taaaaggatt ttgtgattag ttattgtcaa
     2341 taaagctaca agcggtcaat tctcccaaaa ctttgcaaat ttccccgcaa aactgaccgc
     2401 ttgttctcct ctatccattc acctcaacca acttttctct ctacccctac tcaaaatcgg
     2461 ttaaacaatc tgttgaggta aatgttgtgt cggaatggga tttaatctta atgaaactga
     2521 aaaaatcttc tgccaagcaa atttccctaa aattggaagt tcatttccaa tttctcaaaa
     2581 aatcacccaa accggaacta cacttccaat ttttcaatcc cccacatttc ccttttctcc
     2641 caatccattt cagctttcac cccaaaagcc gttgcaatat tttcggcatt taagaccgct
     2701 tgtgtgttgc cgctgacgag taaattgccg tttttaagca gaatgatttc atcacaaaaa
     2761 cggtaggcaa ggggcaaatg atgaatcacc accacgcagg tttgtgttgg agttagggct
     2821 ttgagctgct gcataatatc gatttggtag taggggtcga gggcggcaat cggttcatcg
     2881 gcaagcaaga tcggggcttg tttcatcaaa caacgggcga gttgcactcg ggtctgttca
     2941 ccgccggaga gctgttggta agtgttgtcc agcaggtgag aaatcgccaa ttgttcggca
     3001 accgaacgca ccttttgacg ctcttgttca ggcggaagcg gtgcgggcaa gccgagtgca
     3061 atcacatcat acaccgaaag ttgccacgcc acgttgagct gttgggcgag gtaggcaaat
     3121 tgtcggctcc tctcaacggc ggaaagggcg tgcagtttgc aattttccag ccaaatttca
     3181 ccgcttgtcg ggcgtagaat gccggcaatc gctttgagca acgaggattt ccctgccccg
     3241 tttgcgccca taatgccgat caatttgcct tttggcagat agcaagagag gtgttgaata
     3301 ccgtgggcaa gggtgagatt ttcaatcttg atcattgtgc caatctccat tgctgggtga
     3361 ataaaatcca aatcaaaaac ggtacgccca aaattgccgt gagcgtgccg atgtaaattc
     3421 gggcaaaaaa cggcacatat tgcaccgcca gatctgcaat cagcagtaac aacgccccga
     3481 ttaaagcgga ggtaagataa agctgggacg gcggtttttt cagccaaata cgggcaagat
     3541 gaggggctat caagccgata aaaccgatgg tgccggtctg tggaatcgtt gctccgacca
     3601 acagcgccac gccaatgcta acggtaaaaa aactgcgttg caggttgatg cccattgttg
     3661 ctgccgtctc ttcgccaaag gtgagcaggt cgagataacg ccgttcccga tagaggcaga
     3721 caatgccgag caagatcaac ggtaacgccc aacatactgc ctctgcggtt gcccagacta
     3781 atgagccttg caaccagcgg tagagttccg ccaacgccca cgggctttcg gcattggaaa
     3841 gcagtaaagt caccgctgcc ccgagcaaca cgtttaccgc cacgccactt aaaatcatca
     3901 ttgttgtgcc gtggcgaaag ctaatcagcc acaccagcaa aaatgccccc agcgcccctg
     3961 ccacaccgcc aaacagtagc cagcccatcg gggctgaaaa atagtagagc agaaatacgc
     4021 tcaccgccgt tgcccccgaa ctgctcccaa gcaaaccggg gctggcaagc ggatttttaa
     4081 acacgccctg catcgcattg ccggcaagcg caaggctggc gcccgtcagc accgccaagc
     4141 caatacgggg cagtcgaatt tcacccagca ccagccagcg cagatcgctt agcacgcctt
     4201 ccgcattttt aagcaaggca aaatcgctca gttggtaaaa ggctgcgttg ctaacaatca
     4261 gcaacaacaa gcttccaagc acaatgttta atttcttcat tcttctttct ctcatcaaac
     4321 gtgcaaatta taccatagcg ccaaagtcaa gctgaaaacg ctatttttgc gatcatcatc
     4381 gaaaaactag cgtttgccga atgtaaccca cgacaggctt tgctatattc cttcaatcag
     4441 cctaagtttt gtatttaaaa cattacagat tgggggtaga atgtaccata ttgaacgcac
     4501 tgaaattttc gaccaatggc ttgaaaattt aaaagatcca cttgctgtgg tgaccattgc
     4561 aagacgtatt gaacgtgccg aaagcggaaa ttttggcgat accaaatata tcgcagaagg
     4621 aatttccgaa atgaggctaa acgtcagcaa aggttatcgc ctttactatg cgcaaaaagg
     4681 tagcattatt tatatactac taaatggcgg acataaaggc acgcaacaag ctgatattga
     4741 taaagctaaa atgctatggg cagaaattaa acaacatatg gcagaacagg agaaaaagaa
     4801 tgaacgaatt atatgacgcc ccaattccac aagctactcg tgaaaaattt ggcattcaac
     4861 ctttcgatgc cgctgaatac ctcgccaatg acgagctaat cgccctttat ttggcggaaa
     4921 cattgaaaga cggcacggac gaggagttta ttcaagcatt gaataccgtg gcacgagcga
     4981 aaggaatgaa tgagttagcg aaaaaagcag ggatcgggcg tgaaagtttg tatcaaagcc
     5041 tttccagcag taagccccgt tttgagacta tccgcaaaat tattagcgca ttaaatttgg
     5101 agttgtcggt cgttaaggcg taagtttgtg cattaattgt atcccctgcc aaaccccgtg
     5161 gtcgaaacag taggtgtatt tcatcggtag gacaagcggt ggattttggc tcattttttg
     5221 ccatattttt tgtaatgctg ggtgtttgag cagttcggct tggttgttat agctttggtt
     5281 atcggtgagg aacaataact gtttgggttg cgctaacagc agtttttcta gcgagaaatt
     5341 ctgtggcgtg aggtcgcttt ttaatggtga cagaccgaga agatccaaca acgtttgata
     5401 ttgcggaaaa tgcggttcga tcatacccgt ttcgcttaga attaaagttt cagcaagcgg
     5461 ttgttttagc ggaatttttt gcaaacgtag ccgttccacc agcttttccg ctttggcttg
     5521 attttgggtt agctcgccca gttgtaaaat cagtgtgaaa agctgttcgg gtgtttgcgg
     5581 actgtcgttt aatgcgacta acttaaagcc aagctgtttc agccgtgcgg tgagttgcgg
     5641 atagaaggtt tcattcagca aaatggtgct gtcggcatag ggcaacaggg cggtgagttc
     5701 aggctcaacg gtgggcttgt ccgtgttcag tttatccaac atcatcaacg gcttttggga
     5761 atagggcgac atcgcccgaa tttgctgtgg ttcggcaagt tccagcaaca gacggtcgct
     5821 acacaaattt ggcgataaac ggtaagctcc tgaaatacgc ccagtgatag aatttttaaa
     5881 ctgtgaatta tcggtgtaac ggccactaat agaaaaactg tgatcttgtt cggtaaataa
     5941 gcgatattct agtgccgcac ttttttcgga taaggttttt tcacgcaaat atttatcaga
     6001 ggtatagcgt gtttttgcat aatctgtcag taaactgacc gcttgtgtca cttctccttc
     6061 acggtcaaag tttacatcta attgataatt cgcattaagt tgtttttcgt tgctgtagcg
     6121 agcatttgaa ccgaaatgtg ttgctttact attgaattgg ctgatatttg cttggtgttt
     6181 cagcagctct tgttcatttc cccaataacc gcctaattta aaagtttgat tgcgagtacg
     6241 ggaatattca ccgctaacgt ctgaattata gccatcaata tgaacggttt gggaagattg
     6301 agcggcaaga acttctaccc ctttgttacc gaggtcataa cctaaacgta aagagccgtt
     6361 atcacgatga aagccatctc gttcgcttgc accaccggtt ttcacttctg agcctgtttc
     6421 tgtggtatag ctgaaatggt ttttactcag tgcggaaatg cctttggtac gatggctatc
     6481 accgtgtaag gcatagtaga aaccgttgtg aaatccggaa agtgttgcgc tggcatcacg
     6541 ggtattattt gagcctaaac caagatcgac ctccgcattg aatggtttct ctttgtataa
     6601 accgctttta gtggtgatat aaactacacc acccatagca ctgcttcccc aaagggcgga
     6661 ttgctcgcca cgcaacactt cgatacgttc gatattgcta atcggtaagc caccaaaatc
     6721 gaaatttcca atattaatcg gattgacttt tacaccgtca atcacaaccg cagtatggcg
     6781 agattctgcc cctcgtaaaa ataagctagt aagagtacca cgcccacctt gttgcccaat
     6841 cgccacgccc ggcacagtct ttaacacatc actcacataa gtcgcattgc gtgcggcaaa
     6901 atctttttcg gtaagaaccg tcacgctgga agcggttttg tcttggttga ttggggttgc
     6961 ataggcggaa tagactgtta cggaatcaag ctgagtcatc tcattttgtg caaaagctgt
     7021 acttgctagt gcaacagaaa tggcgaatgc tgtgggattc tattgatcgc ctaagtcctt
     7081 taaaaccgaa atttgtttcg gtaacttatg gagcaaattc tggtgagcga gatcgtacac
     7141 acagtattgt gaaatcaatc caagaaaaaa cagggatcat ttcagctccg cacttaacag
     7201 gcattgatgc aacaccggaa gaattaaagg taattgccaa agattattgg gatagtggta
     7261 ttcgccgaat tgttgctttg cgtggcgata taccgaaagg ttatgataaa gcactatttt
     7321 acgcctcaga tttagtcgct ttattaaaat cagtagcaga tttcgatatt tccgtggctg
     7381 cctaccctga agttcaccct gaagcaaaat cagcacaggc agatttactt aacttgaaac
     7441 gtaaaatcga tgcgggtgca aaccacgtta ttacgcaatt cttttttgat gtagagagtt
     7501 atttacgttt tcgtgatcgc tgtgtttcta ttgggattga ttgtgaaatt gtgccgggta
     7561 ttctgccggt gacaaatttc aagcagttgc aaaaaatggc agcagtgact aatgttaaga
     7621 tcccgacttg gatgggtaaa atgtacgaag ggttagatga tgatcaaacc accagaaact
     7681 tagttgcagc aagtattgca atggatatgg tgaaagtgct ttctcgtgaa ggggtgaatg
     7741 atttccactt ctatacctta aatcgtagtg aactcactta tgcaatgtgc catactttag
     7801 gcgtaagacc tgatttaaca actgcataat cgaacattaa ggctgtatag ctaaatgagc
     7861 tatacctcct tatagtttta cttctcttca gccacccaaa tctcgccatt ttttaataat
     7921 aaataggctt tgttggaatc ggctttggtt tgtttaattc cagccggcag ggcggttggc
     7981 aattcagtga tcttgcctgt tttatccaac acaacaactt gttgatagcc catttggggt
     8041 atcagtgcga aagtctctgt tgtcgccact aaattggttt cgtgatcacc atagcggtga
     8101 ttgcttaagc cggaggtaat aaaacgttca gctaattggt ttcctttcag gctgtattca
     8161 accaaattgc cttttagatg tggcatttgg attgcataga gcttgcggtt aaagataaac
     8221 ggcgattgcc aacggttagt cgacagcggc tcactttcgg cttctattga taattttccg
     8281 tctttaacgc caatcacaac agtgctggcc ccattgccat cgccagagat aacagaaacg
     8341 atcttggttt ttccattttc tgtgaaagtc gcccagcggt tggcttcaaa tactcgccct
     8401 tgttgggtga gtttttctgc taaggggttt agggtatggc gttctagaaa ttgaatttcg
     8461 cctgcctcta catcatcgcc taatacaccg tgttgatatg taaaatcatc aggctttgca
     8521 agtacagcaa tatgcccttg gttaggtgtt tcggcatcaa aatcaatttg cagagggtga
     8581 gcatcaggca acacctcggt ttctgcggtg gcagtaatag tggcttggtt tccttgcgtt
     8641 tcaattctgg ctaacttaaa ttgtccgttt tgtttggtca cggcaatggt ggcaaaatta
     8701 agggcggtca ttgtagcttt cggggcaagg ggaatgttgg aggtatagat tttatcagcc
     8761 gtccacagca taaaatgccc gttttgatcc gctaacgcaa ttcgttggta ttgagcttta
     8821 ggttcaatct cggtggaaac tccatctgcc agtttttgag cttgttgtgt gactctccat
     8881 aattgttttt gttggttaat taccactaat tcgccttgtt ctgaaaggtc aaattggctt
     8941 actttgccaa tttggggaag tgggagtgga gaaagctgaa catcagcaaa caaagaagcg
     9001 gagaacaagc ttaagattaa cagaatagat tttttcatta gcgttaccta aaaagaagat
     9061 ttaaatgata aagggagatg ttatctccct ttacgcttta gcctttataa ccattcgggt
     9121 tatttttttg ccaattccaa gtgtctttca tcatttgttc tagcccacgc tcggtttccc
     9181 aacccagttg ctctaacgct ttttgtggag cggagtagca aacggcaata tcgcccgggc
     9241 ggcgatctac cactttgtat ggaatagtaa tgccatttgc ggcttcaaag gcttttacca
     9301 tatctagcac cgaataacct gttcctgtgc ctaaattgta aacgtggaaa ccggcatcat
     9361 tttggtgctt gtctaaggct tttaagtgac caagtgctaa atctaccacg tggatataat
     9421 cacgcacacc tgtgccatcg tgagtattat aatcgccacc aaacaccgat aattgaggta
     9481 atttgcccac agccacttgg ctgataaacg gcattaagtt atttgggata ccgtttggat
     9541 cttcaccgat taaaccgctt tcgtgagccc ctaccgggtt gaagtaacgc aatactaccg
     9601 cacttaattg tgggaaggct ttaacggtat cttcaagaat gcgttcaacc atatatttgg
     9661 acgtaccgta agggttggtt gtgccaccga cagggcaaga ttccacaatc gggataatct
     9721 gcggatcacc ataaacggtc gccgatgaac taaacacaat ggtattcaca ttggctttta
     9781 gcatctcttc taccaataca atcgagccgg ttacattgtt ttgatagtaa cgtagcggtt
     9841 ctctgacgct ttcgcctaca gcttttaaac cggcaaagtg aattaccgat tcaatctgat
     9901 tttccgcaaa aattttgcgt aaaatatcac gatctaaaat atcgccttga tagaatttta
     9961 cgctcttgcc ggtgatctgc ttcacacgct caagtgatac ttcagaggaa ttagaaagat
    10021 tatctaacac cacgatttca cgattttcgt ttaataattc aactaatgta tgtgaaccga
    10081 tgtagcctgc accacctgta actaaaattg ccattttatg ttcctctata aaattaatac
    10141 gaaccaaggt tattgttgct attttacccg atttaatcag gcttgctaat atttattcag
    10201 tttataatgc cactccggct tccggcagta attccggaat gccgttttta atcgggtaag
    10261 caatattgag cttagggtta attaatcggt tgttctcttt gtcccattct aatttttcat
    10321 tagagacagg gcagacgagg ttattgagta gtgtttcgtt catcttcttt tcctagtttt
    10381 tgtagaatcg gggctaacaa acaagcggtc gatttttctg aaaatgttgc agaaaccggt
    10441 acataccacc aatttggctg tgcaaaatcg tggcatttta ccgcatcttt ctcggtcatt
    10501 aataacggcg tttggctatc agcaaattga gccagctgag ccttatcaaa ggcttgatga
    10561 tcggcaaagc cttgagtttt ggcaagcgga atgcctaatt tttctaacat cgtaaaaaag
    10621 cgtggtgggt gaccgatacc ggcaatcgcc acacagggtt gggtaaattc gcttaatggc
    10681 ttgcgttgat tggtgactaa attaattgca tcagacggtt caagcgtcat taaatgctcg
    10741 ttagcttgcg gtgtgccgcc gttgcaaata accgcttgca cggagtttaa acggctcggt
    10801 aattcacgca atccgcccgc cggcagcaca aaaccgttac cgaaacgcct tacgccatca
    10861 accaccaccc attccatatc tcgctgtagg gcatagtgtt gcaagccatc atcggtgatg
    10921 atgatgtccg gctcaaactg atttaatagt aattcaatgc tttgttggcg gtttggagaa
    10981 atagccaaag gcacattggt tcgctgaaca atcagaaccg gttcatcacc caccatttca
    11041 gcagaacttt ctcgggtaac taattgcgga aacgttttcg ctttaccgcc atagcctcga
    11101 gaaatcacgc ctacttttac gccacgctgt tgcagttgtt ccaccagcca aacgaccact
    11161 ggcgttttgc cgttgcctcc aaccgagata ttaccgacta ccagcatagg caaaggcgaa
    11221 cggtacgatt gcaaaatatt cagagaatat aaccgcttgc gagcttgact aatcagccaa
    11281 aacagcaacg aaagcggcga aagcagccaa gtgataaggg attttgtttg ccagattttc
    11341 atattattta tttttaagtg tttcaactaa atctcgtaat aaggctaatt cacgtttttg
    11401 gttttcgata atttcttctt tatgggctaa taattcatct ttgtgggaga taataagttg
    11461 taaacgttga atttcttcta ctccatttcc taatgagata aatgaattag tgagattatt
    11521 atctgtatta tttatgtaaa tttttccttc ttccccatag gataataatt cgcaaatatc
    11581 catattaaat acttctgcga tttgttctat tttcggtaaa ttagagatag tttcaccacg
    11641 ttctattttt gcataacctt tggttgtcat acttaatttt tgagccattt catcttgtgt
    11701 ccaatgatta ttttctcgca gtaatttgat tttttcgtgt actttcatat aacacctata
    11761 gattgtggga gttgggatat aacttgatgt ggtaaaggat aaattttgtg gattgtagca
    11821 gtttattgag caatttagaa tagagtaaat tttatcttaa gctcacagga gaagaaacat
    11881 tcatgaataa tcaatataat ccattatatg gaatgctagg tattttagcg tcagctgcat
    11941 cagtaatttt gcctctttat gcagcatata aagactatca atttggggag aatatgttat
    12001 ctcttatgga tataattatt ttcccgttag gtattgttcg tggacttatg tatttatttg
    12061 gatagattat gaaaaaatat ttattttttg cttttatgac attaagtaat gttgcttatc
    12121 ctaatttaga tgagtggtac tcagcttcag ataaagagcg aagagaattt atcgcaaaac
    12181 attttgcaga agaaacagta agaagtgata gaaatacacc gtatgattat gctatgtgca
    12241 ctggtagaat gtttgctaaa caactgactc gagatgaagt caaagactac cctttggcaa
    12301 acactaagcc gcaatattta acccgtgata gacggattga gattatgtct aatttacctc
    12361 gtgaaatatt acaaaattgt gctaaataca tacagtaatt ttatgagtaa caccactttg
    12421 gaattaagtg gtgttatttt aattttaata atgtctctaa aatcatctcc aacataaact
    12481 caataaagcc ggtagaatca ttttggctgt ctgcgagaga aagcatttga taataacgtt
    12541 gttgattttc gtaaaccatt gtttcaatcg gcaaccaagc gaaaagtggg ttccattgtg
    12601 ctaaaaggac attttgccat aatcgaccca ttctgccgtt tccatcacta aaggggtgaa
    12661 tcatttctat ttcatagtgc ataaccgagc ttttaatgag tgcaggtgta tcatcttgtt
    12721 tagcccaaga gaacaactca ttaatcaaat tctctacgaa ttgaggacga gcccccatat
    12781 gcacaagttg cccactgaaa ttataaatgc tgacatcttt tgaacgaaaa gcccctgcgt
    12841 catttactaa gtcagcagta agaaacttat gtgctttgag aaaatcttta atcgagtaag
    12901 gattatagtg catcatttca tcgtaagcgt cataggcatt tttgacttca cgaatatctt
    12961 tggggtgtcc gagaaccttt ttgcccttaa tgattgcggt aacttgctca atcgttaatg
    13021 aatttgcctc aatagctaaa gaggcttgaa ttgatctcaa gcggttattt tttctaagat
    13081 gtaaattacg ctcaaaatcc aattgtagcg ttcccaattt atgagaaatt tctacaacca
    13141 gattcagcat tttagtggta actgtaaaag gtggtttata agccattttg caataatcct
    13201 aaaaaattaa accgcttgtc attgttactc caccttcggc ttatcgccgt tttcaacaca
    13261 gcctttgccg atggtgactt ttttcgcatt gagggttggg agatcgtaca ttgtgtcaag
    13321 taataagttc tcgacaatag aacgtaaccc acgagccccg gttttgcggc taatcgcttt
    13381 ttgggcaatt gaaattaatg catctttggt gaagtgcaat tcaacgcctt ccatttcgaa
    13441 taaggcttga tattgcttga tgatcgcatt tttcggctcg gttaagattt gaatcagagc
    13501 ttcttcgtcc aattcttgca gcggagtcac caccggtaaa cgcccgatta attcaggaat
    13561 taagccgaat ttgactaaat cttccggttc aacttgtttg aatagctcgg ttaaatcttg
    13621 gcgatcttta tcttttttca atgccgctgc aaaaccgata ccaccttgag tgttggtacg
    13681 ggcttccacg attttatcta aaccggcaaa agcaccgccg caaataaaga gaattttgga
    13741 ggtgtccacc ggaatggttt cgcctttcgg gtgtttgcga ccgccttgtg ggttaatgtt
    13801 cgccaccgtg ccttcaagta gttttaataa ggcttgttga acaccttcgc ccgatacatc
    13861 acgggtaatg gatgcacttt ccgatttacg ggtgattttg tcgatttcat caataaaaac
    13921 aatgcctcgt tccgcttgtt cggcttcaaa atcgcatttc attaataatt tttgaatcac
    13981 gttttcgaca tcttctccca catagcctgc ttgggtaagg gtagtagcat cagctaccgc
    14041 aaaaggtacg tttaaacggc gggcaagggt ttctgccaac aaggttttac cgctaccggt
    14101 cggcccgatt aataaaatat tacttttacc taactctacg ccattagtgg cttgatggtt
    14161 tgacaatgca cttcttaagc gtttgtagtg gttataaacg gccaccgaaa gcactttttt
    14221 cgcgtgttct tgaccgatga cataatcatc taaatgagcg tgtaattcgt gaggtgtcgg
    14281 cacattggtg aaaaaactgc cttcatcgtc ttggttttca tcaattaacg gctcttcttc
    14341 accgtgtaat aaggcgtagg attcctcgat acattcatta caaatatagc cttccgtgcc
    14401 ttcgactaat tgatcgactt cggtacgttt tttaccgcaa aaactacagt ggggttcttt
    14461 ttcaaatgcc attacgccac ctcactgcga gaagttaata ctttgtcgat taagccatac
    14521 tcagcggctt cttccgcaga cataaaatta tcacgctcgg tatcggctaa cactttttca
    14581 tagctctgac cgctgtgttc tgccatacgg cgggtaaggg tagctttcaa gcgtaaaatt
    14641 tcttccgctt gaatttgaat atcggttgct tgacctctcg ctccacctaa aggttggtga
    14701 atcataatac gagcgtgcgg cagagcaaag cgtttacctt ttgccccggc tgaaagcaaa
    14761 aatgccccca ttgaagccgc ttgccctgtg caaagggttg ctacatcggg tttgatgaag
    14821 ttcattgtat cgtaaattgc caagcctgct gttaccacgc cacccggtga gttaatgtat
    14881 aaatagatgt ctttttccgg atcttcggct tctaaaaaca gaagttgtgc cacaatcagg
    14941 tttgccatat tgtcttccac ctgaccgttt aaaaaaataa tacgttcttt taataaacgt
    15001 gaataaatgt cgtaagaacg ttcgcctttt gaggtctgtt ccaccaccat tgggactaat
    15061 gccattttgt tttcctctgt cgtaatacaa aatctcgcta ttctagcaaa ttttcagaaa
    15121 atcattaaca acaagcggtc agattgttaa aatcttttgc aaatgatgag gaaattatga
    15181 cattaacaga aatttaccaa aaatttgaac gttgtaaatc gtgggaagaa agataccgct
    15241 tgttaattca gctaagtcgc ttgttaccaa aaccaagtga gcaagagttg gcacaaatag
    15301 cggaaattga gggctgtgaa agccgtttat ggtttgaatt tcaagctgag ccacgaaaag
    15361 tagtggcata tagcgatgcc cgtttaatgc aggggatttt atttattgtg agtgtagctt
    15421 taactgaaaa aacggcagaa gagctgaaag gctttgactt aaaaacgatg tttgatgagc
    15481 taaaaatttc acaaaattta accagcacaa ggttaaatgg gttgggtcag ttacagaaac
    15541 atataatgat gaatttgtaa ttcaccctcg ccccttgtgg gagagggtga ataaaatccg
    15601 caggatttta ttcgggagag gggaatataa aaaacctctg atttctcaga ggcttaaatt
    15661 tgttggcgga acggacggga ctcgaacccg cgaccccctg cgtgacaggc aggtattcta
    15721 accagctgaa ctaccgctcc atactggtgc taaaataata gtggtttcct caacattgag
    15781 caaatagttt ttgcaaaata gtgtttaatt ggttgtaaaa taaccacttt atttctgctt
    15841 gatcgccttg ataaacagca acggcggacg gtgctgtaaa tctttaaatt cattgtgcca
    15901 ccgaggttgg cctgccagca ttggttcttc catttgcaca atctcaaacc cgccttgaat
    15961 aaggttattc acaatggttg ccattgtgcg gtggtaggtt ttaaagggtt gttgaaacca
    16021 acttctgtcc cgttcgccct cttcccgata atagttcaag cggtaagcaa cttgttgttt
    16081 ttcttggttt ttctcccaac gatagccttc tcggtaacag gtgacaatcg ggtgttcttg
    16141 cgagaaaatc agcgtgccac aagcagtcat tttttgcgaa atttttgcaa gtagttcgga
    16201 aaaatcagca atataatgaa acgcaaaaga gctggttact acatcgaaat cgccctcgct
    16261 gatctcattt aatcgctcca tcggcaggca gtaaagggaa aaatcgttgc ctttttgcca
    16321 atgagcagaa agatcgcttt ctgcctgttg tagcattaat tcagataaat ccaaccccac
    16381 cactttttct gcaccgagcg ttaaataatg ggctaaatga actcctgtgc cacaacctaa
    16441 atccagcact tttttgccgg ttaagtctgg cagtagagag aacattgttg gcttttccac
    16501 cacttcattc atacttattg gattttgtcg aagttgttgg taacgctcaa agaaaatcgg
    16561 agtgtcgtaa atgctttttt tcacttaata gcctttaaac aaatataaaa taaggcgggt
    16621 taaaacccgc cactacgata tgattagtaa gtcgataatt ttcgcaaagt ttctaacgct
    16681 tttccactct caagcgtttc ttttactttt tgcacattgg cttttaaatc atcttctcca
    16741 aaggttttca ttaataatgc gacatttgct gccaccgcat caatatgagc cagtttacct
    16801 tttccttgta aaatagcggt tactttttcg gcattttctg caggttcacc gcctttgaga
    16861 tcttctaacg aatggcgttc aatgccgaaa tcttccggcg ttaaggtgta atagtcgatc
    16921 tgtccgtttt gaatttccgc aacctgcgtt tcgccgtgaa cggcaacttc atctaaacct
    16981 gcaccgtata ccacaatagt gtgttcgtaa cctaaggctt ttacggtttc agcatagact
    17041 ttcactaact caggggagta cacaccgagt aattggcgtt tagcgtgagc cgggtttacc
    17101 aacggcccta aaatattgaa aatcgtgcgg gtttttaagg cttggcgaac aggggcggca
    17161 tatttgaatc cgctgtggta ggttggggca aacaaaaagc agatgttggt ttcatctaaa
    17221 gcaaggcgtg ccgtttcagg tgaaacgtca acattaatac ctaaatggct taatacatcg
    17281 cttgagccgg ttttacttga tacgctacgg ttgccgtgtt tggcaatttt atagcccatt
    17341 gtggcggcaa caatcgcact tgtggtagaa atgttgatgg tattatgccc atcgccacct
    17401 gtgccgacaa tatccgcaaa agggtaatca ggcgttgaga acggattggc attttcaagt
    17461 gcggcttttg cagcacctgc aatttcatca acggtttcgc cacgcagttt tagagcgatt
    17521 aaggcagcag caagttgttc atttgataca ttgcctttaa taacttcact aaaaaaacgg
    17581 tgagattccg cttgggctaa ggcttggttg gcgaataatt tatctaaaag tgcttgcata
    17641 gtctcttcct ttttaattag cgatgtgcct gatattccaa atcggttgcc tcgttgccgg
    17701 tcattccacg aaagccccag caatgctctg gctgttcttt aatggtgatt tcaacgtcca
    17761 ttggcacaat gccgactttg gtgtgtaagg cactaaatag tcctttaatt aagcgttttt
    17821 tgagctgttc gctccgccct tgcatcaggt ttatttcaat cacaataaaa tcttggctac
    17881 ggttaattgg gggatagaaa ttttccgcat ccaataagtc aaaacgcaaa gcgtggcgtt
    17941 gttttggtac gccaaggctc atttgcatac agtcaaaaat cacgtctgca atcagggctc
    18001 tgcggtctgc taaggtttgt tttaatccat atacactaat catttttttc tcctaataac
    18061 cattccaccg actgcttaag taattttgtg ccttgcacgg ttaaaatgga ttccgggtgg
    18121 aactggaaac cgcaaatcgg taaggttttg tggcgaattg ccatcacaat atgttcaaat
    18181 ttcgcattaa cgataaattc tgccggtaat tcatcgccca ttaatgagtg ataacgagcg
    18241 acaagcattg gattgttaat gcctgaaaac atcgcttggt tatcgtgttc aatacgagaa
    18301 actttgccgt gcaatactgt gccggtatgc actactttgc cgccaaaggc ctcaattaga
    18361 gcttgatgtc ctaaacaaat gccaatcatc ggtactttgt ctttcagacg gcgaataatt
    18421 tccaataaat tgcctgcctc agccggatta cccgggccgg gggaaagggc aaccaaacaa
    18481 ttttcggtgg tttcagcttt ggctaaaaaa tcctcaagcg gataatcatt gcggaaaatc
    18541 gttacctgat gccctaattc acgaaattga tcgaccaagt tataggtaaa agagtcgaaa
    18601 ttatcaataa aaagaatatt tgccatagtt tgtccttatg cttttgcatt cacctgccca
    18661 atcgctttta acaccgcgcg tgctttatgg cgtgtttcat ctgcctctaa ttgtggatcg
    18721 gaatccagca cctcaccaca accagcttgc acataggcaa tgccattttg aacaaaggcg
    18781 gaacggatca cgatacaggt atctaaattg ccgtctgagg ttaaatagcc caccgcaccg
    18841 ccgtagctat ggcgtttttg ttgctcgact tggtagatca gttgcattgc cttaattttc
    18901 ggagcaccag ttagcgttcc catattcata caagcttgat aagcgtgcag agcgtcaaga
    18961 tcttttctaa gtgtgccgat cacacgagaa actaagtgca taatttgcga atagcggtca
    19021 atttgcatta aatcaaccac acggcgagtg ccggattcgc tcacacgagc cacatcattg
    19081 cgggcaagat cgactaacat taaatgttcg gcaagctctt tttggtctaa acgcagttct
    19141 aattccaaac gggaatctaa ttcaggatcg atattacctt gttcatcaaa accgcgtggg
    19201 cgagagccgg caatcgggta aatttccaac tggcggttgg cttgcgaata tttcaacgca
    19261 ctttcaggcg acgccccaaa cagagtgaaa ttttcgccct gcatatagaa catatacggg
    19321 cttggattgt tgattttgag ctgtttatag ctggcaagag tattcgggca aggcaagctg
    19381 aaacggcgag agggcacaat ttggaacaca tcaccgatat taatatggtg tttgagtttg
    19441 cggataatcg ctttgaaatc ttcatcttca atattggcgg ttgcctcact cgttgcggtt
    19501 tggttcgcta gaggcagctc aatatgtgac agatttgcaa gtttttgcgt aaattcgacc
    19561 gcttgttggt tcaaattggt ttgttcattc ggttcaaaac agaaggtgtt tagcaccgca
    19621 gtttcggttt ggtggtcgat tgtaaccagt tgctctgcta aatagaaagt gtaatctggg
    19681 caacttaagc catcatcttg caggctgata ttttccatcg gaataaaatt tgccaccaaa
    19741 tcgtagctaa ataatccgcc caaatagata ggcgatgtgg aatcagcaaa cagttggctc
    19801 accgttctta gcccgtcaaa cacggtggtg gttttgagct tgctgtcttc atctaactgg
    19861 ttgctgatgg ttgggaaaat cgcttgcaag cggtcgtttt tgtctaaaaa tttgcaagtc
    19921 ggagcagggt ttaacaggct caatgcgttt gcaatcaaag gtaaaaccgc ttctccgttt
    19981 ggggttaaag cgtggaaagt cacggtttga tcttcacaga aaatatgcac tgccgatttc
    20041 gcaaacagca aactttttac actgttttta ctttgaattt ccgctgaatc taataatagc
    20101 gtatgtgggc gttcgccgca taatgcgtaa taaacacggg tcgtatcggc aaaatagggt
    20161 aattctgttt gagtaatcgt taattgaggc atagcaaatt cctattcaat ttttcgtact
    20221 attaaactag tacattaaaa agaagtcaag caattattcc agataattat gcgagcttgg
    20281 gcgaacttgg tgtataatta gcccaatttt tagaaagtcg aaggcttgag actatgacac
    20341 aattttttta tatccacccc gacaacccac agcaacgctt aattaaccaa gcggtagaga
    20401 ttattcgaaa cggtggcgta attgtttacc ctaccgattc aggctatgct ctcggttgtg
    20461 caatgggcga taagcacgca atggatagaa ttgtagcaat tcgtaaattg ccggaaaatc
    20521 acaattttac cttagtttgt agtgatttat ccgagctttc tatctacgcg ttggtcaata
    20581 atcaagccta tcgcttaatt aagaataata ccccgaatcc ttatactttt attctgccgg
    20641 caactaagga acttcctcgc aggctgatga caaagcgtaa aacagtgggg attcgtgtgc
    20701 cggataatgc gatcgcattg gcgttaattt ccgccttagg tgagccgatt ctttcttgct
    20761 cgttaatgtt gccggagacg gaaatgaccg agtcagaccc tgatgaaatt cgggatcatt
    20821 tgcaaaatcg ggtggattta attatccacg gtggttattt agggcagcag cctacaacgg
    20881 tagttgactt aaccgatgac gtgccggtta ttattcgaga aggatcgggc gatccaacat
    20941 cgtttaatta aattgatgtt gtatgattaa tatatagaat tatgcgtagg ggggctgtgc
    21001 cagtccgtat taatatcgtt atttggacag gcacaggacc tgtccctaca atgaaaatca
    21061 aattcagacg cttgtgaaag cgacaaaagg aaccttatga caacttttca aaaaaaatca
    21121 actgcgactt tccgtgcaga caaacgtggt gaaagccgtc cctcatttaa aaaagaagag
    21181 caaaaatctg aacgcaaatt tggtaaaacg tcagaaaaac caccacgtcc aacttctaag
    21241 ccattaacgc aaagaattgc aaaaaaagtg gaaaaaacga ccgctagtga agtggcatct
    21301 caagagaaaa aagccaaagt agtaggtgaa aagctacaaa aaatcttagc gcgagcaggg
    21361 caaggttctc gccgtgaatt agaagagatt atcgctgctg gacgagtgag cgtggacggt
    21421 aaaatggcta ctcttggtga tcgtgtgcag gttagctcat cgactaaaat ccgcattgac
    21481 ggacatttag ttaatttaat gccggcacaa aaagagatct gccgtgtatt aatgtattac
    21541 aaaccggaag gggaactttg cacccgttcc gatccggaag gacgatccac cgtatttgac
    21601 cgcttgcctc gtttaagtgg cgctcgttgg attgcggtcg ggcggttaga tattaacacc
    21661 tcaggcttat tattgttcac taccgatggc gaattagcca accgtttaat gcacccaagc
    21721 cgtgaagtcg aacgtgaata ttcggtgcgt gtgttcggca acattgacga tgcgatgtta
    21781 caacgcttac gcaaaggcgt tcagttggaa gacggaccgg caaactttaa acaaattaag
    21841 gttgtgggtg gcacaggctt gaaccaatgg tttgatgtga ctttaaccga agggcgtaac
    21901 cgtgaggttc gccgcctgtg ggaatcgcaa ggggtagaag tcagccgttt gattcgtatc
    21961 cgttacggca atatcaaatt agataaaggc ttacctcgtg gcggctggga agaaatgggc
    22021 ttagaacaag tcaattactt gcgtgagctg gtagggttac cgccggagac tgaaactaaa
    22081 gtggaagtgg gggtaaaccg ccgccgaacc aatatccgtc aaattcgtaa agcggtaaaa
    22141 caacatcaaa aatatcgtgg ctaaacacca tctttggggc tgcattagtt ctgctaatgc
    22201 agctattttc tttcaaaaaa ggagcattta tgtcttggga tattgttgca acattggcgg
    22261 tcactgggat tgccgtattt ttatttgcaa ctgaaaaaat gcgaatggac gtagttgcga
    22321 ttttagtgct gtgttcatta gtattattag ggcaggttga taccaaatct gctctgagtg
    22381 gattttcaaa ctcagctact gtaaccgtaa ctgcaatgtt tgtattagct gctggtttac
    22441 aaaatagtgg tgctttagat agtgtaggca gtttacttgc taaggtaaaa tctccttggt
    22501 tattcttgct tgtactctgt ggcgtaaatg ctgctgtttc tccttttgtg aataatacgg
    22561 cagtggtcgc agtattaatt ccgattgtga ttgccgcagc acagaatata aaaatggctc
    22621 cttccaaagc ccttattccg ttatcatttt cttctcaaat ggcaggtgtt tgtacactga
    22681 tcggcacttc cactaatcta ttagttaatg caatcgctca aaagcaaggg cattccggtt
    22741 tcggtatgtt tgaatttgcc cctttgggga ttattttttt agtggttggg gttgcctatt
    22801 tattagtgac cagccgtttc ttattacccg aatcacattt gcaacttgaa gatggtgagg
    22861 ggtttggaaa atatgtttct gaacttaaag taaataaaga ctctgtatta attggcaaaa
    22921 gtacatttga atcaggatta aatgaagaat ttaatctatt tactattggt gttttgcgtg
    22981 atggggaaag attatcgaca ccgagtcatc aagtattgca aaaacatgat attttattgt
    23041 tgcggggtga atcggaaaat ttagcaaaag tacgagaaaa atatggattg caccacgttg
    23101 tgtatggacg ccgtgagaat gatgaagata atctggatga agacttgatg gtggctgaag
    23161 tgatgatttc tcctatttct cgttggatag gagggactat tcctatttta caacagcgtt
    23221 ggaataaaaa tgcaacggtg ttaggcattc aacgccaaag taaagtaatt cgtgagcgtt
    23281 tacgcaccac tgcttttaaa atgggggata ttttattact cacattacca aaagaggata
    23341 tggagacgtt acgccaagat aaagacttta ttgtgttatc ttctgattta gtcaaaacgg
    23401 aggaatcgtg gaaaagtaaa tttgctttag gggtaatggt tttggtggtg gcaacagcag
    23461 ccttaggctg ggttcctatt tcagtgagtg ccttaattgg tgcagttgcg atgtgtgttg
    23521 ctggttgttt aacggctgaa gaagcctatc aatctattga ctggaaaatc attttagtct
    23581 tagctggatt actgccatta ggtgaagcga tggcaaatag tggggcggcg caatttattg
    23641 ttgataacac gcttggtaaa gtaggggagt tcgggccttt agtggtgtta gctgtattat
    23701 atttactgac aatggtgtta accgaattta tgagtaatgc agggactgcc gtgttgctta
    23761 cgcctattgc ggtttctacc gctaaaatgt taggggtaga tgcttcccca ttcattattg
    23821 ccgtaatgtt tgcggctgcg accagcttta tgacccctgt tggctatcaa accaacacga
    23881 tggtatacgg tgcaggtggc tataaattca cagattttat taaaattggt ttaccgctaa
    23941 atgtaatcta ttggatttta gggatagtat taattccgat tttcttccct tttaatccat
    24001 aattgataga taattataga aaaaaggttt acagatcaga aactctgtaa acctttttta
    24061 ttcagcaata aatcaatttt ctattggaaa attaccattg ataacccatg ccaatactac
    24121 caccaaagtc gcctctggta ttgctgttac cagttaattt atagataacc ttcccgttat
    24181 ctgaaatccg agaataacct actgcgattg cagcttcatt acggtatgta tctccagccg
    24241 ttgctaacat acttttacct ggtagatatg cttgcggtaa acctgcggtt gcagttgcac
    24301 cagcaatacc agcgcgtaaa cgtttatcaa ctttgtttac ttttgaatca atattattga
    24361 tcttattatt gatatttttt tctgttgctt ttaattggct aaagttaact gcatcagtat
    24421 cttcagttcc tgcttttacg ttagtcactt ttgttcctgc tgcattaata cctgttttag
    24481 ttatactcgg tccccctaca atagttaatc cattagtatc aatggttgta tcaccagtct
    24541 taacagtatc ggctacagca atgttagctg ttactgtttg agctgtgaca gaattaactt
    24601 taatatcttt agctaattta accgttaatg aaccattacc atttgaaata accccgatat
    24661 tattatcagt tagttgtgat tcgttagata ccccaccttt tactgtaaca gtagaaccta
    24721 atttacgttg agatggcgtg ccggtatcac ctgcaaatgt tagtgggctg gttactgcat
    24781 catttaacgc agtaattgca gagcctacat tattgaccgt tttactaact tcatttgtag
    24841 gagcgccatc aaccacagta tagcttgggg ctgaaacagc accatttgca tttacacttg
    24901 aattaccacc taaagcggta gcaatagtat ttgccgtatc gtaaagttgg ctaccattaa
    24961 ctgcatctgc tgagataggt gaaatatcac catcagctac attagttatt tttaatttgc
    25021 cagcatcgac acctgtcatt gtgacacttg ggccattatt aatggttaag ccgttgttat
    25081 ttagttttga attaccaaca gctacggagc cggcaggagt taaatcaatg tctttcgcta
    25141 atttaactgt taatgtgtta gcatctgttg ccactacacc gatattatta tcagtcaata
    25201 tggttgcatc ggccccacct ttaacattca gagaagtacc taatttacga acaatttcag
    25261 taccagcatc atctacaaaa gtaagtgctc cattacttaa ctcattcact ttcgtgttta
    25321 aaccatcaat ttcggtataa gcagcataaa gttgtgaacc gttgatagca tccgttgatg
    25381 agtccaaaat acgacctgct gcaacattcg ttaaagtacg ttcattgcct acagaaccaa
    25441 tacttacagt tgagcttggc gtagtacctg caaatgtgta tgtattgcca tttagcgttg
    25501 cactttttgt tgcaactgtg gctactgttt cagagttagt acctaatgca acagaacctt
    25561 ggtgtgttgc ttttgcattt tggccaagag ccactgcagc agttgttgtt gcttgtgatg
    25621 aaacacctaa tgcaatagaa gctacaccgg ctgcatttgc actattacct aaagcaatcg
    25681 cagagctacc tgcagcattg gcatttctac ccacagaagt tgaccatatt ccacctgcat
    25741 tagcagagtt acctaaagcg gttgactgtg tacccgaagc atttgcgtta tagcctgcag
    25801 caagagaatc tgcaccgatt gaacttgctt cataacctac agcggttgaa ttttcaccgg
    25861 tagcttcaga tttagagcct aatgcagttg cacgggtagc tgtcgctgtt gaagctgtac
    25921 caatagctgt tgaggtatca gcatttgcat tggctgcaga accaaccgcg agggcatttg
    25981 ttgcatttgc attcgcattg tagcctatag aagtggcatt cataccatca gctgttgcgc
    26041 gaggaccaac tgcagttgta cgttcaccgt ttgcttctgc ttcagagcct aatgcggttg
    26101 ccagctcacc attagcactt gttgcaacgc cgatagccat tggattaaca ccgctagagc
    26161 ctgaattatc atagttagca cgttgaatgc catcatctga aatactaaca taatgagttg
    26221 caaatttgct gatagcttgt ttgagttgac tgacattgac cgcatcagta tctacatcgc
    26281 ctgcggcaac attggcgatt ttattaccgc cattatctaa gccagattta gtaagactta
    26341 ccggtttgtc tgcaacgccg ttagcgatgg tgatacctgt attgttaaca acggtatcac
    26401 ctgttgttaa tgaaccatta gcgcctaagt taactttttc tgctaatttt atggttaaag
    26461 tactattgcc atcagctaca acaccaatat tattctcggt taatatgcct gtagatccgc
    26521 ctttgatctt gactgttgaa cctagatggc gctcaaaatt agttcctgta tcaccggcaa
    26581 aggttaacgg actgatcacc gctgtgttta atgcgcttag tgctgcagaa acagtagtgt
    26641 atctcccttg tttgccttct ttatctgcat ctggtgtgcc attcactaaa gcgtaggttg
    26701 ggaaagtgat atttccattt tcagtaacag ctgccccacc acctaagata tttgcggttg
    26761 ttgcagcaac attacctata gcttgttgtg ttaaatataa ttgtgaaccg tttatggtat
    26821 ctgtagagct taaagatata cgtcctgcag caacattggt gatagttctc tctttgcctt
    26881 ccgccccaat acttactgta gcaattggat ttgttccagc aaagtcacta tatgtaatac
    26941 catttacagt tgcatttgta gttggtatgg ctatagctgt aactgagttg ctacctagcg
    27001 ctatcgaatc ggtatgttca gcagtggcat ttcgacctat agcggttgca ttaaaggcgg
    27061 aagcatttga tgattctccg attgcaattg tgcgttgatt tgttgcttta gcgcttaccc
    27121 ctagtgcaac agaagccgcg cctgatgcag tagcacgatt gcctaaagcg gttgcagaac
    27181 ctccacttgc attggcttca cgaccaaatg cagaagcata atcgctggtt gcacccgcat
    27241 tagtaccaac agcagtagtt aaatttgctg ttgcatttgc ataataacct aatgaggttg
    27301 caccgtggcc tgaagtcttc gcttcataac caattgctgt tgagttatcg ccatttgctt
    27361 gagattttgc accaattgct gtggagtgaa tagctgttgc gttagcttca gcaccatagg
    27421 cggagctaac aataccagtt gcattggcat gactacctac agcagttgct tttcctatta
    27481 ccgtttctcc tgttgctgct gtagttttgt aattattaac accatttgca agagcggaat
    27541 taccgatggc gatattatca tcactggtta catttgtagt aggtcctgct agttttgcat
    27601 tagcataagt accaattgca atattgtggc taccactagt accgtctcca gcagtattac
    27661 caatagaaat cgtattgttt cctgttacat tagagctagc cgaataacca ataccaatat
    27721 tgtattctgt gctgttagag tgatttaatc cggcatgatc gccaataaaa acttcacgta
    27781 agcccattgc ggttgcattg taccctactg ctacggaacg tttatcggca gtggcttgcc
    27841 caccaacagc tgttgaagca aaactagcgt tagcaaagcc tcctaatgca gttgaaaaat
    27901 cggctgtcgc ggttgtgtta taccctaatg ctgtagaaac tttaccgcta tttccttcta
    27961 agcctgttat tgtgcttact agtgttgagt taactttaga tccatcacca attgcgatag
    28021 atgtttgtgg gttattatct ggtatggtcc cataggttgg tgaataggtt gcagcacttg
    28081 caaaacctgc agaaagcgca agacttagtg tgctgagttt aataatatta gtggttagtg
    28141 atgtatttgt tgcattagat ttattagcac ttcttgataa ttcagaagca acaatccaag
    28201 ttcgttttgc atggttccaa acaatgcgat aaattttatt catagaacta ctcctgttct
    28261 tattttttaa taattttaat gatttgagta ttgcctagcc aaatatatac aataggctga
    28321 aaaattatat aggtgaggtt ttatggtgta aatagtggct ttttaggaat aaatatagca
    28381 attttttgat ataaatgtat tattataaat tttatgtttt gtactaatat tgaggtggag
    28441 tgcagagttt tatttggttt ttggtatgtt ttttagtttt aaa
//
LOCUS       DANMCL010000026        28348 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.026, whole genome shotgun sequence.
ACCESSION   DANMCL010000026 DANMCL010000000
VERSION     DANMCL010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 28348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28348
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.026"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(205..3921)
                     /gene="metH"
                     /locus_tag="PXF40_001026"
     CDS             complement(205..3921)
                     /gene="metH"
                     /locus_tag="PXF40_001026"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HDL5802379.1"
                     /translation="MNTQHRTELLQNALTERILILDGAMGTMIQKYKLTESDFRGERF
                     KNSTIDLKGNNDLLTLTQPLLISAIHEKYLAAGADIIETNTFSATTIAQADYELESIA
                     YELNLVGAKLARLAADKFSIPEKPRFVAGILGPTNRTCSISPDVNDPGFRNITFMQLV
                     EAYAEATRGLIEGGADLIMIETIFDTLNAKAAVFAIETVFDELGVKLPIMISGTITDA
                     SGRTLSGQTTEAFYNSLRHAKPLTFGLNCALGPKELRPYVEMMSKISETFVSVHPNAG
                     LPNAFGGYDLGAEEMATYIKEWAELGWLNIVGGCCGTTPEHIQAFAEATKGVAPRKLP
                     EIPTAMRLSGLEPLTIDDNSLFVNVGERNNVTGSAKFKKLIKEEKFAEAIEIAISQVE
                     NGAQVIDVNMDEALLDSKKCMTRFLNILATEPEAAKVPIMIDSSKWEVIEAGLQTVQG
                     KPIVNSISLKEGEEKFIHQAKLCRRYGAAVVVMAFDEVGQADTEERKVEICTRAYRIL
                     VDQLGFPPEDIIFDPNIFAIATGIEEHNNYGVDFIQACERIKRDLPHAKISGGVSNVS
                     FSFRGNNVVREAIHAVFLYYAIKAGMDMGIVNAGQLAIYDDLDPELREAIEDAVLNHR
                     HDTTDRLLEISEKYRGVKVESADESAAEWRNLPVAERLKHALVKGITTYIIEDTEEAR
                     QQFASPLEVIEGPLMAGMDVVGDLFGDGKMFLPQVVKSARVMKQSVAYLEPYINATKQ
                     KGSSNGKMVIATVKGDVHDIGKNIVSVVLQCNNFEVIDLGVMVPADVIIETAIREKAD
                     LIGLSGLITPSLDEMEYFLGEMNRLKLDIPVLIGGATTSKEHTAIKLYPKYNYPVVYT
                     ANASRCVTVCATLMNPEAKAEFWEKTKAEYEEIQRKFAVRKPLRNGLSIEEARANRFD
                     GFSGEWADYVPPTPKQTGIIEYKNVPIATLRKFIDWSPFFMLWGLMGGYPDAFDYPEG
                     GEEARRVYNDAQRVLDEFEQNGKLNPSGIMGIFPAVREGDDIAILNEDRTACIGKSYH
                     LRQQSERGKNSKSPYNLCLSDFIADRESGQQDWFGMFAVCAGIEEHYLVESYKAAGDD
                     YNAILLQAVGDRLAEAMAEYLHFELRTKVWGYTVEDEDNGRLIREEYIGIRPAPGYPS
                     CPEHTEKQIIWDLLEVEQRIGMKLTESYAMWPAASVCGWYFTHPTSNYFTLGKIDEDQ
                     VLDYAKRKGWDELTAKKWLSVAMKQDVKSQAENI"
     gene            4087..5370
                     /locus_tag="PXF40_001027"
     CDS             4087..5370
                     /locus_tag="PXF40_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5802380.1"
                     /translation="MTACHEPKRSIWQQIFTKNMLLCVYTGFCSGLPLFVLIQLMPAW
                     LTSANLDIKTIAAFTLTSLPYTWKFLWAALLDRYFPPFLGRRKSWIFISQIGLLVILA
                     SFGLFNPVQDISIIVTLSVLLAFLSATQDIVVDAFRREILSDNELGLGNSIHVNAYRI
                     AGLIPGGLSLFLADHYAWDTVFLITAAFLVPCLFVTLIIAAEPNHKPIDRSKPFYMAF
                     VDPFKEFFTRKGVAGAIGLILFIFLYKLGDSLATTLQTKFILDMGFTKSHIAGIVKIT
                     SLWCSIGGGIIGGVAMLKLGVNRALWLFGFVQLITILGFAYLASFEHFPTESIGAAEL
                     WKLGLVMAGEYLGVGLGTAAFVAFMARETNPAYTAMQLAIFTSLAALPSKMLGAYTGH
                     LVEMMGYYQFFWLCFFIGIPGMLMLFKVAPWGQAE"
     gene            5714..6382
                     /locus_tag="PXF40_001028"
     CDS             5714..6382
                     /locus_tag="PXF40_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5802381.1"
                     /translation="MAHNGSGKSTLMRLLSGDITPTSGSILVDGLPLHQLSTKEAAKH
                     IAYLPQRLPEAADFLVQELVALGRFPYQKWLQKPTEFDVQIVEQAMESTSVTQFAKQP
                     VNSLSGGEKQRVWLAMCLAQQTPYLLLDEPLAALDIVYQVEVMQLIRKLVNEQGLTVI
                     IIIHDINLASQFCDEIIALKQGELCIQGSVDEIMQEQKLLEIFGLKLHLFNHPAGLHK
                     VAVL"
     gene            6379..7260
                     /locus_tag="PXF40_001029"
     CDS             6379..7260
                     /locus_tag="PXF40_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802382.1"
                     /translation="MMFRQYKRFIFLFILQISTAFAQPNIFTPDWSIASALTEMGNPP
                     IAMGDKRIYPLWSHRPIQPNSVLDIGARYQPNRELLAQLPVELVLSNFFYAHLASVYP
                     KEIPQIDVLFDGGNTEPQQHWHTYQKATRMIGTEIKNPNAAEAYLTKTEQTLAQWGKE
                     ILNSNPDIDYYSVVQFGSPRELRIYASNSMFRVAFDLMGLKQADLGVGDRWGNKLIPV
                     SDLAKLPERTCLIVISPFSKMTQADLENSYIWQRLGFGKNRCMKVLPPVWLFGGADSI
                     SHFAEFLHNAMTQGEKE"
     gene            7260..8075
                     /locus_tag="PXF40_001030"
     CDS             7260..8075
                     /locus_tag="PXF40_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5802383.1"
                     /translation="MKSSFLLIGCILLSLVTAVIRLNMVWEWEWQLLLINVDLLPINQ
                     AAVKAALLPEMTTSFLAGGLLAIASSGLQHIVRNNLASDSTLAVSSGAQLALMIAVIF
                     FPAAELFSSFWIALLGSLAAIVLVLFIAKASKLNPLTLILGGLIVNILFGAIASLLTL
                     FYFDFLFGVMVWGSGSLLQDGWATSITLAITVVVAFFIFVLLSRPLTILSLDDEQARR
                     LGAPVNLLRYLVIFVCAAITALVVSKIGVIGFIGFAVQVWLILPKYDIYYFAS"
     gene            8072..9208
                     /locus_tag="PXF40_001031"
     CDS             8072..9208
                     /locus_tag="PXF40_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5802384.1"
                     /translation="MIAFLAGGFLLFFTNNLIGIVSRIYDTLLPVGAFTATLGAPLLI
                     FLVLRQRKAQFEASNTAYFPVKRLNSWKLPILLLCAGVILFCLLQIIAPTMNGWAISI
                     DENLMSSYRLPRSLSAIATGAMLAVSGSLLQILTRNPMASPEVLGVSSGATIAAVLSF
                     LLFPTLSSISFLLFGVLGSLTVLALIMWLSRKLQPSALMITGVAIGALVSGLMAIIQL
                     SGSPRLTAVISWLSGSTYYANPNTVWILLSVAILLISATLLFIKPLRLISLGETVSYH
                     LGLEVKKVQMIVLLLIALMSAASTLAVGPMSFIGLMTPHLAKNLGAITPEKQIPISAL
                     LGAMLMLIADWLGRYLIFPYEIGAGIIASILGGIYFLLLLKQHK"
     gene            9236..9634
                     /locus_tag="PXF40_001032"
     CDS             9236..9634
                     /locus_tag="PXF40_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5802385.1"
                     /translation="MNTLSKAIKLALYSSGIGFISTAYAETVTHLDTVEVSAETPNAS
                     SEETGRYAQKKAKGSNGMALSAKDTPQSVTAVTHQQIRDQNLNTIAKALEATHGVSVS
                     LLDRGRYSFSARGFGIDKVKVDGMDLKVSK"
     gene            9669..11372
                     /locus_tag="PXF40_001033"
     CDS             9669..11372
                     /locus_tag="PXF40_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5802386.1"
                     /translation="MLYDRVEVVRGATGLTTGAGDPSASVNLVRKRANSISRYTILEA
                     GIGRYADFNTMIDHSQALNNSGSVRGRFIAEHKNGNTFIKNEKERYTTLYGNIEADLT
                     DTTKLGLGVSYQKEKRDAALWGGLPAFYSDGGETNWSRSKNASPEWAYWDNESVNYFA
                     DITQKLGEKWELALKGNYRVGKHNSELFYFSGSSLNRQDGLGWSPWPGKFKNDNTQSN
                     VQLDLTGSFSAWGLEHDAAIGIQYNRAHRNSYAADNSTFDGAFDFNNWNGIYARPNWG
                     SMSEKYYQNLKEFGVYVSTRLHLTDRLSMLLGSRISSYRTEGTFYGSTQNFHANDVWT
                     PYAGLTFDINPQNTVYVSYTDIFKPQSQVDINNKLLSPVTGETYEAGWKGSYFNDNLQ
                     TQISVFETRQDNLAQSAGINPNTLLAYYTASKGAKVRGFEVEASGNVTEKLKLSAGYT
                     QWKGDDASGNPINTTQPRKQFKLFATYDMNRLVQGLTVGAGVNWQSRIYTKHATYGEY
                     GQKAYTLVNLMARYQFNDNFSAQLNIDNLFDKKYRNALSFSQYSYGEPFYTRLNLRYE
                     F"
     gene            11484..12128
                     /gene="adk"
                     /locus_tag="PXF40_001034"
     CDS             11484..12128
                     /gene="adk"
                     /locus_tag="PXF40_001034"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HDL5802387.1"
                     /translation="MKVILLGAPGAGKGTQAQFIMNKFGIPQISTGDMFRAAIKESTE
                     LGKQAKALMDEGKLVPDELTVALVKDRIAQPDCANGFLLDGFPRTIPQADALKESGVK
                     IDLVLEFDVADEVIVERMSGRRVHQPSGRTYHVVYNPPKVEGKDDVTGEDLIIRQDDK
                     PETVLERLAIYHKQTKPLIAYYTAEAEAGNTRYERLDGTKPVEEVSAELAKILS"
     gene            complement(12190..13005)
                     /locus_tag="PXF40_001035"
     CDS             complement(12190..13005)
                     /locus_tag="PXF40_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HDL5802388.1"
                     /translation="MSYKVVFSLLFSLFLSTANANWTKINDVNYTWGPFNIYHITLFT
                     ESGTYVEGTRPLMLTLQYKKPWEGRDFAVSLARTWNNLGIKLPEKELDEVITHLRKTF
                     PDIKPEDTLHYIALEDRGYFILNDKVVSDVFNKAFNDAIVAIWLDPKMDISHQLLDPS
                     YKPRAEAESIKPQVEERVAENLQEPIVNTEVSKELKADSQAVEQAPNKIDIPVADKTQ
                     ASVVNEATQPVENKDKKEPEKLEEKPKEMKIENPEVFISPIYDDILMLTKYCV"
     gene            13195..13410
                     /locus_tag="PXF40_001036"
     CDS             13195..13410
                     /locus_tag="PXF40_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HDL5802389.1"
                     /translation="MFPEFRDLITQLKQNNSHFARLFDKHNELDQRIKNMEANIELAT
                     HEEVEALKKEKLHLKDQLYAILKQESA"
     gene            complement(13469..14626)
                     /locus_tag="PXF40_001037"
     CDS             complement(13469..14626)
                     /locus_tag="PXF40_001037"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HDL5802390.1"
                     /translation="MSLDLADIRTQITNLDRNLLKLLAERHRLAFDVVRSKEITQKPL
                     RDLEREKILLQELVNFAEAENYQLDPQYVTQIFQRIIEDSVLTQQNYLQNKLNAQKEE
                     QVSIAFLGMRGSYSNMASRQFAKKYQGTLAELSCHSFNEVFEKVSLGEADFGVLPLEN
                     TTSGSINEVYDLLQHTDLTLVGELAYPIKHCVLANGTVDLAEVDTIYTHPQPAQQCSQ
                     FLAGLDKVHIKYCESSSHAMQMVARLNKPNIVALGNEDGGKLYGLTNIKTDIANQAHN
                     ITRFIVVAKEAVQVSPQVQTKTLLLMTTTQQAGALVDALMVFKNHHIRMMKLESRPIY
                     GKPWEEMFYVELEANIHSENTQKALAELEQVTSYLKVLGCYPSEIIEPVKL"
     gene            complement(14748..16814)
                     /gene="prlC"
                     /locus_tag="PXF40_001038"
     CDS             complement(14748..16814)
                     /gene="prlC"
                     /locus_tag="PXF40_001038"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HDL5802391.1"
                     /translation="MSNPLLNYTGLPAFSQIKPEHIKPAVEAVIKECRETVEKVAQIE
                     NPTWENFYMPQAMAEDKFSRAWSPVGHLNAVKNSPELREAYQACLPLLSEYSTWAGQH
                     QGLYQGYVKLKNSPEFETYSVAQKKAIENSLQDFELSGISLPAEKQKRYGEISARLSE
                     LNSQFSNNVLDATMGWDIVITDEAQLKGLPESALEAAKLSAESKGKKGYRFTLEIPSY
                     LPVMTYCENKALREEMYRAYVTRASDQGPNAGKWDNSAVIDEILKLRHEKAQLLGFKT
                     YSDYSLATKMAENPQQVLDFLNDLAARSKAQGKNELCDLKKFAKAHFGIEHLDLWDIP
                     FYSEKQKQALYSVNDEELRPYFPENRVLSGLFEVIKRIFGMRVEEQKDVDVWHKDVRF
                     FNIFDKNDRLRGSFYLDLYARENKRGGAWMDDCINQKRLADGTLQKPVAYLTCNFNKP
                     IGDKPALFTHDEVTTLFHEFGHGIHHMLTEIDVGDVAGINGVPWDAVELPSQFLENWC
                     WEEEALAFISGHYETGEPLPKAKLEQLLAAKNFQAAMFVLRQLEFGLFDFRLHTEYDP
                     SKQGQVLALLKEVKDQVAVAKGVEWARTPHSFSHIFAGGYAAGYYSYLWAEVLSADAY
                     SRFEEEGIFNPETGQSFLDNILTRGGSEEPMVLFERFRGRKPTLDALLRHKGIVGNAE
                     PVDCTQ"
     gene            complement(16945..17685)
                     /gene="pflA"
                     /locus_tag="PXF40_001039"
     CDS             complement(16945..17685)
                     /gene="pflA"
                     /locus_tag="PXF40_001039"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HDL5802392.1"
                     /translation="MSVVGRIHSFESCGTVDGPGIRFILFLQGCLMRCKYCHNRDTWD
                     LDGGKEITVEELMKEVTTYKHFMKATGGGVTASGGEAVLQMEFVRDWFRACKAEGINT
                     CLDTNGFVRHYSPVVDEMLEVTDLVLLDLKQLNDEVHQDLVGVSNKRTLDFARYLHKL
                     NKPTWVRYVVVPGYTDDDDSAHRLGQFIQGMDNIEKVELLPYHRLGAHKWETLGYKYE
                     LEGVMSPPKEDLERIQKIIESYGHTVKF"
     gene            complement(17934..18959)
                     /locus_tag="PXF40_001040"
     CDS             complement(17934..18959)
                     /locus_tag="PXF40_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5802393.1"
                     /translation="MSKQDLIRSSVAEYLTFITATGESQVDAVYADENVWLSQKMMAV
                     LYDVDVRTISYHLKKIFSDNELAENSVIQFFWITAQDGKNYHTKHYNLSAIIAVGYKV
                     NSERAVQFRKWATEIVHSFAIKGFAMDDERLKNDGTILGKKYFEEQLARIREIRLSER
                     KFYQKITDIYATAVDYDRTATATKRFFATVQNKLHWAIHGHTAAELIMARANAEKPNM
                     GLTNWKDAPQGKIYPFDVVVAKNYLSDNELAQLQRLVSAYLDMAEDMAERQIPMTMAD
                     WETRLNRFLAATDREILQDAGKVTAEIAKSFALSEFEKYRVKQDLTYESDFDLLVKEV
                     AAKYHAG"
     gene            complement(19194..21518)
                     /gene="pflB"
                     /locus_tag="PXF40_001041"
     CDS             complement(19194..21518)
                     /gene="pflB"
                     /locus_tag="PXF40_001041"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HDL5802394.1"
                     /translation="MTQLTDAQQKAWEGFAAGEWQTEVNVRDFIQKNYTPYEGDESFL
                     AEVTPATSKLWADVMEMIKVENKTHEPYDIDCDTPSTITSHAPGYIDKSLEKIVGLQT
                     DAPLKRAIMPFGGINMVKGSCKVYRRELKPEVEQIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVITGLPDAYGRGRIIGDYRRMALYGADFLMKDKQRQFASLQARLESGEDIQATI
                     QLREEIAEQHRALGKMKEMAASYGFDISGPATNAQEAVQWTYFAYLAAVKSQNGAAMS
                     FGRVSSFLDIYIERDLKAGKITEQEAQELIDHLVMKLRMVRFLRTPEYDQLFSGDPMW
                     ATETLAGMGLDGRTLVTKNSFRILHTLYTMGPSPEPNLTILWSEQLPEAFKRYCAKVS
                     IDTSSVQYENDDLMRPDFQNDDYAIACCVSPMIVGKMMQFFGARANLAKTLLYAINGG
                     VDEKSGDQVGPKTEAITSEYLDYDDVMTRLDSFMDWLATQYVTALNIIHFMHDKYAYE
                     AALMALHDRDVFRTMACGIAGLSVAADSLSAIKYAKVKPIRTDIEIKNKAGEVVGVAK
                     NVATDFEIEGEYPQFGNNDNRVDDIAVDLVERFMKKIQKLKTYRNATPTQSVLTITSN
                     VVYGKKTGNTPDGRRSGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTF
                     SIVPNALGKDYEAQKRNLAGLMDGYFHHEATVEGGQHLNVNVLNRDTLLDAVEHPEKY
                     PQLTIRVSGYAVRFNSLTKEQQMDVITRTFTESM"
     gene            complement(21608..22432)
                     /gene="focA"
                     /locus_tag="PXF40_001042"
     CDS             complement(21608..22432)
                     /gene="focA"
                     /locus_tag="PXF40_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HDL5802395.1"
                     /translation="MFSPAEMAKIAEDGAVYKATKNQLYSFLSAITAGGFIAIAFVFY
                     TTTQVGASQMPWGMAKLIGGLVFSLGVIMCVVFGAELFTSSTLTIVARASQRINWLQM
                     FKNWVVVYFGNFVGAISIVLLIWFSGQIMAAKGQWGLVILNTAQHKIHHQWFEAFCLG
                     IFCNIMVCIAVWMSYAGKSLTDKAFIMMLPIAMFVASGFEHCVANMFMIPMGIAISHF
                     ASPEFWTAINVDPTQFADLDVSHFVFKNLIPATLGNIVGGVFFIGLMQWFLYIRKH"
     gene            22633..23127
                     /locus_tag="PXF40_001043"
     CDS             22633..23127
                     /locus_tag="PXF40_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HDL5802396.1"
                     /translation="MTEYLTSFFSLFFSEQNQLFTMFLSGFLSATLLPGNSEIIFTTL
                     ASQHLITYGSLSSFSLFNLLLVATLGNSLGSITTYAIGLLLPRPQNTTNRYSQWALAK
                     SEKYGVLVLLFSWLPIVGDIFCGIAGWLRFSLWQSILFIVIGKLLRYLFLLATLYSVL
                     PHIL"
     gene            complement(23181..24050)
                     /gene="htpX"
                     /locus_tag="PXF40_001044"
     CDS             complement(23181..24050)
                     /gene="htpX"
                     /locus_tag="PXF40_001044"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HDL5802397.1"
                     /translation="MAKRVILFLLTNLAITFVLGIVLNLIFKVTGIQGQSTAGILVLS
                     LVFGFSGSLISLFMSKSMALRSVGAEVITQPRNEAEQWLFNTVQRQAQQANIPMPDIA
                     IYHSADVNAFATGATKSNSLVAVSTGLLNSMTKDEAEAVVAHEVAHIANGDMVTMTLL
                     QGVLNTFVIFLARIISTMAASSRDENGNSSTNTLVFWVVDIVLQMVFGVLATMIAMWF
                     SRQREFRADAGSAQLVGKEKMIAALQRLQRVHEPQEMEGSLAAFMINGSRGKELFMSH
                     PPLEKRIEALRNL"
     gene            complement(24138..25220)
                     /gene="dinB"
                     /locus_tag="PXF40_001045"
     CDS             complement(24138..25220)
                     /gene="dinB"
                     /locus_tag="PXF40_001045"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HDL5802398.1"
                     /translation="MSIQAKHKRKIIHIDMDCFYAAVEMRENPALVGKPVAVGGNANQ
                     RGVLTTCNYEARKFGLHSAMPTATALKKCPNLILLPVNMALYKSVSAQIHEIFHRYTD
                     VIEALSLDEAYLDVTECERYFGSATWIAQAIRNDIFNELHLTASAGVAPLKFLAKITS
                     DQNKPNGQCVITPDDVQNFVKNLPLAKIPGVGKVTNEKLKQLGFETCGDIQQAEKAVI
                     YRAFGKFGQRLWDFSHGIDERAVEPYRERKSLAVENTLLHDISTLEQAEKIVADLFDK
                     LVFRLQRNWGDTPLTEFKKLGIKLKFDDFSQTTLERTTDGFAYERFGELLQQIFTRRK
                     ERKVRLIGLSVHFPEKKVNKQLNLWE"
     gene            25343..26254
                     /locus_tag="PXF40_001046"
     CDS             25343..26254
                     /locus_tag="PXF40_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HDL5802399.1"
                     /translation="MLYGLAIVLIPLFLGYLITLKNHRHMAIVNRVVSLCLYLILLVM
                     GISLGQIDNILTELPQIGGTAFSLVVILLLSNIIGLVIYDKLQPMKRDKVNQDQLPSR
                     LHLLIDSFKLIGITLLGGIIGYFTKGVVDFPLHASTYVLEVMIFGVGIQLRNSGIPLR
                     EVFFNKRGIYTSIVMVASSLIGGVISAFTLDLSLAKGLTFASAFGWYSLSSVLVNDAW
                     GPIYGSIAFFNDISREILCLFLVPLFMRQFPSTAVGIGGATSLDCMLPIIQKSGGIQI
                     VPLAISFGFIVNLAAPLLLAVFIGLEG"
     gene            26360..28126
                     /gene="aspS"
                     /locus_tag="PXF40_001047"
     CDS             26360..28126
                     /gene="aspS"
                     /locus_tag="PXF40_001047"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HDL5802400.1"
                     /translation="MMRSHYCGALNRSHLGQTVTLSGWVHRVRNLGRFIFMQIRDREG
                     IVQVFFDEKDEALFKQASALRSEACVQIQGEVIARDESQINKEMATGEIEVLVKNLVV
                     YNNAEVLPLDFNQNNTEEQRLKYRYLDLRRPEMAEKLKTRAKITSFVRRFMDDNGFLD
                     IETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFR
                     DEDLRADRQPEFTQIDVETSFMTAEEVRALMEAMIHGLWKETLGVDLGKFPMMTWNEA
                     MTRFGSDKPDLRNPLEMVDVADILKSVDFKVFSGPANDPKGRVVALRVPNGAALTRKN
                     IDDYTQFVGIYGAKGLAWLKVNDMNTGLEGIQSPVAKFLNEEVLKALVKRLNLQKDDI
                     VFFGADNWHVATNAIGALRLKVGNDLGLTDTTAWKPLWVIDFPMFERDDEGNLSAMHH
                     PFTSPKELSPEELVQDPENAVANAYDMVINGYEVGGGSVRIFSQQMQQTVFSILGINE
                     EEQKEKFGFLLDALKFGTPPHAGLAFGLDRLTMLITGTDNIRDVIAFPKTTAAACLMT
                     EAPSYANPKALEELAIRTIPQE"
BASE COUNT         7860 a         6190 c         5744 g         8554 t
ORIGIN      
        1 cctctaattt ttttatatac gcaggagaaa attgagttaa ttgataatta ctgtctttta
       61 aaagttgtac taagtgataa ttttgttttt caatcattgt tttgttctcg atgataactt
      121 ctttgcataa aagagagata aattttgcat attttatctc aaaaccaacc gcttgtaaca
      181 ggcgggttaa aacccgccac tacattaaat gttttcagcc tgcgacttga catcttgttt
      241 catcgccaca cttaaccatt tcttcgccgt gagttcgtcc cagcctttgc gtttggcgta
      301 atccaacacc tgatcttcat caatcttgcc gagagtgaag tagttgctgg tagggtgggt
      361 gaagtaccag ccgcagacac ttgctgccgg ccacatggca tagctttcgg tgagtttcat
      421 gccgatgcgt tgttccacct ctaacaagtc ccaaattatc tgtttctcgg tgtgttccgg
      481 gcagcttggg tagccgggcg cagggcggat gccgatgtat tcttcacgga ttaagcgtcc
      541 gttgtcttcg tcttccacgg tgtagcccca gactttggta cgtagctcaa agtgtaggta
      601 ttccgccatt gcttctgcca agcggtcgcc aacggcttgg agcaaaatgg cgttgtagtc
      661 atcgcctgcc gctttgtagc tttcaactaa atagtgttct tcaatgccgg cacaaacggc
      721 gaacattccg aaccagtctt gttgtccgct ttctcggtcg gcgataaaat cgcttaaaca
      781 gaggttgtac gggcttttgc tgtttttgcc tcgttcggat tgttggcgga ggtggtagga
      841 tttgccgata caagcggtgc gatcttcgtt taaaattgca atatcatcgc cctcacgcac
      901 ggcagggaaa atgcccataa tcccacttgg gttgagcttg ccgttttgct caaattcgtc
      961 cagcacccgt tgggcatcgt tatagacacg gcgtgcctct tcgccgcctt ccggataatc
     1021 aaaggcatca ggataaccgc ccattaagcc ccagagcata aagaacggcg accagtcgat
     1081 aaatttgcgt agggtggcaa tcggtacatt tttgtactcg ataatgccgg tctgttttgg
     1141 cgttggcggc acatagtctg cccattcgcc actaaatccg tcaaaacgat tggctcgagc
     1201 ctcctcaata gataaaccgt tgcgaagtgg tttgcgaacg gcaaatttac gctgaatttc
     1261 ttcgtattcg gctttggttt tttcccaaaa ttcggctttt gcctcagggt tcatcaaggt
     1321 cgcacagacg gttacgcaac gtgaagcgtt ggcggtatag actacggggt agttatattt
     1381 cggataaagt ttgatcgccg tatgctcttt tgaggtcgtt gcgccgccaa tcagcaccgg
     1441 aatatcgagc ttcaagcggt tcatttcacc taaaaaatac tccatttcgt ccagcgatgg
     1501 ggtaattagt ccgcttaacc caatgagatc ggctttctcc cgaatagcag tttcgataat
     1561 tacatcggca ggcaccatca cgcctaagtc tatcacttca aagttattgc actgcaacac
     1621 cacgctaacg atgtttttgc cgatgtcgtg tacatcacct ttcacggtgg cgatcaccat
     1681 tttgccgttg ctcgatcctt tctgcttggt ggcgttgatg tacggctcta aataggcaac
     1741 ggactgtttc attacccgag ccgatttcac cacttgcggc aggaacattt tgccgtctcc
     1801 gaacaggtcg cccaccacgt ccatacccgc catgagcggc ccttcaatca cttccagcgg
     1861 agaggcaaat tgctggcgag cctcttcggt atcttcaata atgtaggtcg ttatgccttt
     1921 tacgagggcg tgttttaaac gctctgccac aggtaaattt cgccactcgg cggcactttc
     1981 atcggcactt tctactttta cgccccgata tttttcggaa atttccaaca ggcggtcggt
     2041 agtgtcatga cggtggttca gcaccgcatc ttcaatcgcc tctcgcagtt cagggtcgag
     2101 gtcgtcataa atcgccaact gccctgcgtt cacgatcccc atatccattc cggctttgat
     2161 cgcatagtag aggaacacgg cgtgaatagc ctcacgcacc acattgttgc ctcggaaaga
     2221 gaaagagaca ttcgacaccc cgccggaaat tttggcgtgt ggcaagtctc gtttaatccg
     2281 ctcacaggct tggataaaat ccacgccgta gttattgtgt tcttcaatac cggtggcaat
     2341 cgcaaaaatg ttcgggtcga aaataatgtc ttccggtggg aagccgagct gatcaaccaa
     2401 aatccgataa gctcgggtac aaatttctac cttgcgttct tcggtatccg cttgcccgac
     2461 ttcgtcaaat gccatcacca ccaccgcagc cccatagcgg cggcagagtt tggcttggtg
     2521 aataaatttc tcttcgccct ctttgagtga aatggagttc actatcggct tgccctgcac
     2581 cgtttgcaag cccgcctcga tcacctccca tttcgaggag tcaatcataa tcggcacttt
     2641 tgccgcctca ggttcggtag caagaatgtt gaggaaacgg gtcatacatt ttttggaatc
     2701 gagcaacgcc tcgtccatat tcacgtcaat cacctgcgcc ccgttttcca cttggctgat
     2761 ggcaatttca atcgcttccg caaatttttc ttctttaatc agcttcttaa attttgccga
     2821 accggtgacg ttattgcgtt cgcccacatt cacaaacagc gaattatcgt caatcgtcag
     2881 cggttctaag cccgacaaac gcatagcggt tggaatttca ggtaatttac gaggcgcaac
     2941 gcctttggtt gcttcggcaa aggcttggat atgctccggc gtggtgccac aacagccgcc
     3001 gacaatattc agccagccga gttctgccca ctctttgatg taagtcgcca tctcttccgc
     3061 ccctaaatcg tacccgccaa aagcgtttgg caagccggca ttcgggtgaa ccgaaacaaa
     3121 agtctcactg attttcgaca tcatctctac ataagggcgg agttccttcg gcccgagcgc
     3181 acagttcaag ccgaacgtca gcggtttggc gtggcggagc gagttataaa acgcctccgt
     3241 ggtctgccct gacagcgttc gccctgaggc atcggtaatg gtgccggaga tcattatcgg
     3301 caatttcacg cccagttcat caaacaccgt ttcaattgca aacaccgccg ctttggcatt
     3361 cagggtatcg aaaatggttt cgatcataat cagatccgcc ccaccttcaa tcaaaccacg
     3421 ggttgcctcg gcataggctt ccaccagttg cataaaggta atgttacgga aaccggggtc
     3481 attaacatca ggggaaatcg aacaagtacg gttagtcggc ccaagaatac cggcaacaaa
     3541 acgaggtttt tcagggatgg agaatttatc ggcggcaaga cgggcaagtt ttgcccccac
     3601 aagattcagc tcataagcaa tactttcaag ttcataatct gcttgagcaa tggtcgtcgc
     3661 actaaaggta ttagtttcga taatatccgc accggcggct aaatatttct cgtgaatagc
     3721 agaaatcagg agtggctggg tgagtgtgag taggtcgtta ttgcctttaa gatcgatggt
     3781 actgttttta aaacgttcac ctcggaaatc agattcggtt agtttatatt tttggatcat
     3841 cgttcccatc gcaccgtcta agataagaat gcgttcggta agggcatttt gaagtaattc
     3901 ggttctatgc tgcgtgttca tactctgctt ccagtttttt agtttgatta aaaggaataa
     3961 tagaaatatg tcgcaaggct gtcaaacctt atctgtgacg aaatggaaag ggttagagtc
     4021 gcctttaaaa ttatgctata ttggctcagt tcttcccctt tttattttgc aaaatgtagg
     4081 aaaaatatga ccgcttgtca cgaacccaaa cgctctatct ggcaacagat ttttactaaa
     4141 aatatgttgc tttgtgttta caccggcttt tgttccggtt taccgttgtt tgtgttaatt
     4201 cagctaatgc cggcttggct aaccagtgcc aatttagata ttaaaactat tgccgccttc
     4261 accctgacct ctttgcccta cacgtggaaa ttcctgtggg ctgcattgtt agatcgctac
     4321 tttccacctt ttttaggcag acgcaaaagc tggattttca tttcacaaat cgggctattg
     4381 gtgattttag ccagctttgg cttgttcaac ccagtgcaag atatttcaat tattgttact
     4441 ctttctgtgc tattagcttt tctttccgcc acgcaagaca ttgtggtgga tgcctttcgg
     4501 cgtgaaattt tatcggataa cgaactcggg ttaggtaact ctatccacgt taatgcttat
     4561 cgtattgcag ggctgattcc gggtgggctt tcattatttt tagccgatca ctatgcgtgg
     4621 gataccgtat ttctgattac cgctgctttt ttagtgcctt gcttattcgt tacgctaata
     4681 atcgctgccg agccgaatca taagccaatc gaccgttcta agccgtttta tatggcgttt
     4741 gtcgatccgt tcaaagagtt tttcacccgt aaaggcgtgg caggagcgat tgggctgatt
     4801 ctatttattt tcctatataa attaggcgat tcccttgcaa ctacgctaca aaccaaattt
     4861 attttggata tgggttttac taaatcgcac attgccggca ttgtgaaaat aacttcactt
     4921 tggtgcagca ttggcggcgg tattattggt ggcgtggcaa tgttgaaatt gggcgttaac
     4981 cgagccttat ggctgttcgg atttgtacaa ttaattacta ttttaggctt cgcttacctt
     5041 gccagttttg agcatttccc taccgaaagc attggagctg ccgagctttg gaaattaggc
     5101 ttagtgatgg caggtgaata tctgggcgtg ggtttaggca cagcggcttt cgttgccttt
     5161 atggctcgtg aaactaatcc cgcttacact gcaatgcagc tcgccatttt caccagcctt
     5221 gctgccctac caagcaaaat gttaggggca tacacagggc atttagtgga aatgatgggc
     5281 tattaccaat tcttctggct ctgtttcttt attggtattc cgggaatgct aatgttgttt
     5341 aaggttgctc cttggggaca agctgaatag ctattcataa aaataagatt ttttattaaa
     5401 tatccgacca cttataaccg attgaattac ctagtaattt agtcggttat tttttattta
     5461 tcctaaaatt taccctcacc taaaactaaa tgatattgac tttcatttat aataaaaata
     5521 tatttagcac cgttttcata atagattttc atctactcat tttcattttg attgatttgg
     5581 tggggtaatc ccaccttttt tatgctctta aaacacaaca ctatgattca aataaattcc
     5641 attagctact ctgttgaaca aaaccgtaaa ctgctaagca atatttccct caatttaagc
     5701 aaggggcgtt tatatggcgc ataacggctc gggtaaatca acgttaatgc gtttactaag
     5761 cggagatata acgcctacca gcggttcaat tttagtcgat ggattaccac ttcatcagct
     5821 ttctaccaaa gaagcggcaa aacatattgc ctatttacca caacgtttac ctgaagcggc
     5881 ggatttctta gtgcaggaac tggttgcttt agggcgattt ccatatcaaa aatggctaca
     5941 aaaaccaaca gaatttgatg ttcaaattgt tgagcaagca atggaaagca cctccgttac
     6001 tcagtttgct aaacagcctg taaatagtct atcaggcgga gaaaaacaac gagtttggct
     6061 tgctatgtgc ttagcccaac aaacacccta tttactgcta gatgagccat tggctgccct
     6121 tgatattgtt tatcaagttg aagtaatgca gcttattcgc aagctagtga atgaacaagg
     6181 tctaactgtc attatcatta ttcacgatat taatcttgcc tcccaatttt gtgatgaaat
     6241 tattgcgtta aagcaaggcg aactctgtat tcaaggttct gttgatgaaa ttatgcaaga
     6301 acagaaatta cttgagatct tcgggctaaa actgcacttg tttaaccacc ctgcaggctt
     6361 acataaagtg gcggtattat gatgtttagg caatacaagc ggttcatttt tctctttatt
     6421 ttgcaaattt ctaccgcatt tgctcaacct aatattttta caccagattg gtctattgcc
     6481 tctgccctta ctgaaatggg aaatccgccc attgcgatgg gggataagcg aatttatccg
     6541 ctatggtcgc accgccctat tcagcctaat agcgtgttag atattggagc gcgttatcag
     6601 cctaatcgcg aattattagc acagcttcct gttgaattgg tgctatcaaa ctttttctac
     6661 gctcacttgg cttctgttta cccgaaagaa attccacaaa tagacgtgct atttgatggt
     6721 ggcaatactg aacctcagca acattggcat acttaccaaa aagccactcg tatgattgga
     6781 acagagatta aaaaccctaa tgcggcagaa gcatatttaa cgaaaactga acaaacgttg
     6841 gctcaatggg ggaaagaaat ccttaacagt aatccagata ttgattacta ctctgttgtt
     6901 caatttggct ctccgagaga gttacgcata tatgcgtcta attcaatgtt ccgtgtagcc
     6961 tttgatttga tgggcttaaa acaagctgat ttaggtgtgg gagatcgctg gggaaataaa
     7021 cttattcctg tgagtgattt agctaaatta cccgaacgca cctgtttaat tgtcatctca
     7081 cctttttcta aaatgacgca agcagattta gaaaatagct acatttggca acgtttagga
     7141 tttggtaaaa accgttgtat gaaagtatta ccgcctgttt ggctctttgg tggggctgat
     7201 tccatctcgc actttgctga gtttttacac aatgcaatga cacaaggaga aaaagagtaa
     7261 tgaaatcatc attcttattg attggctgta ttcttttatc cttagtaaca gctgttatcc
     7321 gtttaaatat ggtctgggag tgggaatggc agttactact cataaatgtt gatttattgc
     7381 caattaatca agctgcggta aaagcagctc ttttacctga aatgacaacg tcatttttag
     7441 caggcggttt attggctata gccagcagtg gcttacaaca tattgtcaga aataatttag
     7501 cgtcagatag cacacttgcc gtcagtagcg gggctcaact tgcattgatg attgcggtta
     7561 tctttttccc agccgccgag cttttttcta gtttctggat tgcgttactt ggctctttag
     7621 ctgctatcgt actggtttta tttattgcta aagcctctaa gctcaatccc cttaccctta
     7681 ttttaggggg attgattgtt aatattttgt ttggagctat tgcctcttta ctgacccttt
     7741 tctactttga ttttttattt ggcgtgatgg tttggggaag tggctcactt ttacaagatg
     7801 gttgggcaac ttctattacc ttagcgataa cggtagtagt tgcatttttt atctttgtct
     7861 tactctctcg tccactcaca attttaagtt tagatgatga acaagctcgc cgcttaggcg
     7921 cgcctgttaa tttactacgc tacttagtta tttttgtttg tgccgccatt acagcattgg
     7981 ttgtaagcaa aataggtgtg attggcttta ttggatttgc agtgcaagtt tggctcattt
     8041 tgccaaaata cgacatttat tacttcgcct cttgattgct tttctagcgg gcggattttt
     8101 actctttttt accaataatc tcatcggcat tgttagcaga atttacgaca ctctactacc
     8161 tgttggtgca tttaccgcaa cactaggcgc accattatta attttcttgg tattacgcca
     8221 acgtaaagca caatttgaag caagcaatac agcatacttc cccgttaaac gcctcaattc
     8281 gtggaaactg ccaatattgt tgttatgcgc tggagttatc ctattttgtc tattacaaat
     8341 cattgctcca acaatgaatg gctgggctat tagcattgat gaaaacctga tgagttccta
     8401 ccgcttgcct cgtagtctaa gtgcgatagc aacaggggca atgcttgcgg taagtggtag
     8461 cctattacaa atcttaacga gaaacccaat ggcaagccct gaagtattag gtgtgagttc
     8521 aggggcaact attgctgcag tactgtcatt cttacttttc ccaacattat ctagcattag
     8581 cttcttgtta tttggtgtat tagggagttt gactgttctc gctcttatta tgtggctctc
     8641 tcgtaaatta caaccatcag cgttaatgat tacaggtgtt gctattggag ctttagtcag
     8701 tggcttaatg gctattattc aactaagcgg cagccctcgt ttaacggcag ttattagttg
     8761 gctgtctggc tcaacctatt acgctaatcc gaatacagtt tggattttat tatctgttgc
     8821 aatcctactt atcagtgcca ctttactgtt tatcaaacct ttacgtttga tctcacttgg
     8881 cgagaccgtt tcttaccatt tagggttaga ggttaaaaaa gtacaaatga ttgtattact
     8941 tttaattgcc ctaatgagtg ccgcctctac acttgcggta gggccaatga gcttcattgg
     9001 gctaatgacc cctcatttag ctaaaaattt aggtgcaatt acaccggaga aacagatccc
     9061 tatatcggca ttattagggg caatgctaat gctcattgcc gattggctcg ggcgttatct
     9121 aattttccct tatgagattg gggcaggcat tattgcctct attctcgggg gtatctattt
     9181 cttactgtta ctcaaacaac ataaataatt ttttattcat tacttaggag aaattatgaa
     9241 cacgctatct aaagcgataa aacttgcctt atacagttct ggtatagggt ttatctcaac
     9301 agcttacgct gaaacagtta ctcatcttga taccgtagaa gtaagtgccg aaacgccaaa
     9361 tgcctcatcg gaagaaactg gacgttatgc acagaaaaaa gccaaaggct ctaatggaat
     9421 ggcattgagt gcgaaagaca cgccacaaag cgtaacggct gtaacgcatc aacaaatcag
     9481 agatcaaaat cttaatacga ttgccaaagc acttgaagca actcacggtg tttctgtttc
     9541 tttacttgac agaggacgct attctttcag tgctcgtggt tttgggattg ataaagtcaa
     9601 ggtagatggt atggatctca aagtaagtaa ataaccaatg gacaacgggc gaaaatacag
     9661 gcaacagcgt gttatacgac cgagtagaag ttgtgcgtgg tgctacaggc ttaactactg
     9721 gggcaggcga tccttctgca agtgttaatc ttgttcgtaa acgagccaat agcatttccc
     9781 gttatactat tttagaagct ggaatcgggc gttatgctga tttcaataca atgattgacc
     9841 atagccaagc attgaataat tcaggatcag taagaggccg ctttattgca gagcataaaa
     9901 acggtaatac gttcattaaa aatgaaaaag aacgttacac cacgctttat ggcaatattg
     9961 aagcagactt aactgacact accaaacttg ggttaggtgt aagctatcaa aaagaaaaac
    10021 gtgatgcagc actttggggt ggtttacccg cattctatag cgacggtggt gaaactaact
    10081 ggagcagaag caaaaatgcc agtccggaat gggcttactg ggataatgaa tccgtaaact
    10141 attttgccga tattacacaa aaactaggcg aaaaatggga acttgcatta aaaggcaatt
    10201 accgtgtagg caaacataat tcagaacttt tctatttcag cggctcatca cttaatcgcc
    10261 aagatggatt aggttggtcg ccttggccgg gtaaatttaa aaatgataat acacaatcta
    10321 atgtgcagct tgatcttacc ggttcattct ctgcttgggg attagaacac gatgcggcaa
    10381 tcggtattca atacaatcga gcacatcgta attcctacgc tgccgataat agcacctttg
    10441 acggagcttt cgactttaat aattggaatg gcatttatgc tagaccaaac tggggaagta
    10501 tgtctgaaaa atactaccaa aacttaaaag agttcggggt gtatgtttct acccgtttac
    10561 atcttacaga tagactttct atgcttctag gttctcgtat ttcatcgtac cgcacagaag
    10621 gcactttcta tggttcaaca caaaacttcc acgctaacga tgtttggaca ccttatgcag
    10681 gattaacctt tgatattaat ccacaaaata ccgtttatgt aagttatacc gatattttca
    10741 aaccacaaag tcaagtggac atcaataaca aactactctc tcctgttacg ggcgaaacct
    10801 acgaagcagg ttggaaaggg agttatttca atgacaactt gcaaactcaa attagcgtat
    10861 ttgaaacaag acaagataat ctagctcaat ctgccggtat taaccctaat acattattag
    10921 cctactacac agcctctaaa ggtgcgaaag ttcgaggctt tgaagtagaa gcatctggaa
    10981 atgtaactga aaaattaaaa ctcagtgcag gatatactca gtggaaaggc gatgatgctt
    11041 caggtaaccc aattaacaca actcaaccac gcaaacaatt taaactcttt gcaacttacg
    11101 atatgaaccg tttagtgcaa ggtttaacgg taggagcagg tgtaaactgg caaagcagaa
    11161 tttataccaa acacgctact tatggcgaat atggtcaaaa agcttacact ttagtgaatt
    11221 tgatggctcg ttatcaattt aatgacaact tctcagcaca gcttaacatt gataacttat
    11281 tcgataaaaa atatcgtaac gccctcagct ttagccaata tagctacggt gagccattct
    11341 atacacgctt aaatttacgc tatgaattct aattccgtat aacaagcggt caaaaaatta
    11401 aaaaaatttg caattttagg cagtaatcgg taaggttact gcctaagtga ttttattatt
    11461 tttagtttaa ttgaggtttt caaatgaaag tgattttatt aggtgcgccg ggtgcgggca
    11521 aaggtacgca agctcagttt attatgaaca aattcggtat tccgcaaatt tcaaccggcg
    11581 atatgttccg tgcagcgatt aaagaaagca ctgagcttgg taaacaagca aaagcattga
    11641 tggacgaagg caagttagtg ccggatgaat taacggtcgc cttagtaaaa gatcgtattg
    11701 ctcaaccgga ttgtgctaat ggcttcttat tagacggttt cccacgcacc attccgcaag
    11761 ctgatgcgtt aaaagagtca ggtgtaaaaa ttgatttagt gttagagttt gatgtagctg
    11821 atgaagtcat tgttgagcgt atgagtggtc gtcgtgttca ccaaccttca gggcgtactt
    11881 accacgtggt gtacaatcca ccgaaagtgg aaggcaaaga tgatgtgact ggtgaggatt
    11941 taattatccg ccaagatgac aaacctgaaa cggtattaga gcgtttagcg atttaccaca
    12001 aacaaaccaa accgttaatc gcctactaca ccgcagaagc agaagccggc aacactcgtt
    12061 atgagcgttt agatggaaca aaaccagtgg aagaagtaag tgctgagtta gcgaaaattt
    12121 tatcttaaat ggattattaa aatgaacaag cggtaatatt tttcgagaat attaccgctt
    12181 gttctttgct taaacacaat atttggtgag cattaagata tcatcataaa tcggtgaaat
    12241 aaacacttcc ggattttcaa tcttcatctc ctttggtttt tcttctagct tttctggctc
    12301 tttcttatct ttattctcta ccggttgagt cgcttcattt accacactag cttgagtttt
    12361 atctgctaca ggtatatcta ttttgtttgg tgcttgctct actgcttgag aatccgcttt
    12421 cagctcttta gaaacttcag tatttacgat aggttcttgt aagttttccg ctactctttc
    12481 ctctacttgt ggcttaatac tttctgcctc tgctctcggt ttataagatg gatcaagtaa
    12541 ttgatggcta atatccattt tcggatcaag ccaaattgct acaatagcat cattgaaagc
    12601 tttattaaac acatcagaga ctactttatc atttaaaata aaataacctc tatcttctaa
    12661 tgcaatatag tgcaatgtat cttcaggctt aatatctggg aaagtttttc tcaggtgggt
    12721 aataacctca tctaactctt tttcaggtag cttaatgcct aaattattcc aagttcttgc
    12781 taaagaaacc gcaaaatcac gcccctccca cggtttttta tattgtagag taagcattaa
    12841 aggacgtgta ccttctacat aagtaccgct ctcagtaaaa agcgtaatat ggtaaatatt
    12901 aaatggcccc cacgtataat tcacatcatt aatttttgtc caatttgcat ttgctgttga
    12961 taaaaataga gaaaacaaca gcgaaaagac cactttatag ctcattattt ttgtgtcctt
    13021 aaatctaaaa ttcctactca ttattatagc cttaaatatg gctcacacac attataattt
    13081 tcgatataaa ttttgtgatc aagttcaaaa aaatagaaag atttaacagt aaatcaacaa
    13141 aaaaatgcta gtatttaatc aagtaaaatt tgcaaccact attaggagtt aaatatgttt
    13201 ccagaatttc gtgatctcat aacccaatta aagcaaaaca attcacattt tgctcgctta
    13261 tttgataaac ataatgagct agaccagcgt attaagaata tggaggcaaa tattgaactg
    13321 gcaacacatg aagaagttga ggcactaaaa aaagaaaaat tgcatttaaa agaccaactt
    13381 tatgcaattc taaaacaaga atcggcttaa cctaaagtaa aagctcagaa aatattctga
    13441 gctttaattt cggtcatatt agacaatatt acagttttac cggctcaata atttcgcttg
    13501 ggtagcaacc caacactttg aggtagctgg taacttgctc caattccgcc aatgcttttt
    13561 gggtgttctc ggaatgaata tttgcctcca gctccacata aaacatctct tcccaaggtt
    13621 tgccgtaaat cgggcgggat tccagtttca tcatacgaat atgatgattt ttgaatacca
    13681 ttaacgcatc gaccaatgca cccgcctgtt gcgtggtggt cattaacagt aacgttttgg
    13741 tttgtacctg tggcgaaacc tgcacagcct ctttggcaac aacaataaaa cgggtgatat
    13801 tgtgagcttg attagcaata tcggttttga tattcgtcaa gccatacaat tttccgccat
    13861 cttcattgcc caaggcaaca atattcggct tattcaagcg agccaccatt tgcattgcgt
    13921 gcgagctgct ttcgcaatat ttgatatgta ctttatctag cccggctaaa aattggctac
    13981 attgctgggc aggctgaggg tgggtgtaaa tggtatccac ctccgccaaa tcaaccgtgc
    14041 cgtttgccaa tacacaatgt ttgattgggt acgccaattc acccactaag gttaaatcgg
    14101 tatgctgcaa taaatcatac acttcattga tcgaacctga agtcgtgttt tcaagcggca
    14161 gtacgccaaa atcggcttca ccaaggctga ctttctcaaa tacttcatta aaagaatggc
    14221 agcttaattc cgccaatgtg ccttgatatt ttttggcaaa ctgtcgagat gccatattag
    14281 aataagagcc tcgcattccc aaaaacgcaa tcgaaacctg ctcttctttt tgtgcattca
    14341 atttattttg cagataattt tgctgagtca gcactgaatc ttcaataata cgttggaaaa
    14401 tttgggtcac atattgcgga tcaagctggt aattctccgc ttcggcaaaa tttaccagtt
    14461 cttgaagcaa aatcttttcc cgttctaaat ctctcaaggg tttttgtgtg atttctttgc
    14521 tccgcaccac atcaaaggct aagcggtggc gttctgccag tagctttaat aaattgcggt
    14581 ctaagttggt tatttgggtt cgaatatcgg ctaaatctaa agacattatt tcactctctg
    14641 tcaggctaaa tgctgaaaat tataacgagt tgcaaaagaa agaaaagaca agcggtcaaa
    14701 tttacaaaaa aatttgcaaa tctaaccgct tgtaaaacgt gtttacttta ttgagtgcaa
    14761 tcaacaggct cggcattacc tacaatgcct ttgtgtctga gcaaggcatc aagggttggc
    14821 ttacgcccac ggaagcgttc gaacagcacc attggctctt ctgaaccgcc tcgggttaag
    14881 atattatcta agaaagactg ccccgtttca gggttgaaaa tcccctcttc ctcaaagcgt
    14941 gaataggcat ctgctgaaag cacttccgcc cataaataac tgtagtagcc cgccgcatag
    15001 ccgcctgcaa aaatatgcga gaaactgtgt ggcgttctcg cccactctac gcctttggca
    15061 acagcgactt ggtctttcac ctctttaagt aaggctaaca cttgtccttg tttgctcggg
    15121 tcatattcgg tgtgtaggcg gaaatcaaac aagccaaatt ctaattggcg aagcacaaac
    15181 attgccgctt ggaagttttt cgccgccaat aattgctcta atttcgcttt tggtaacggc
    15241 tcgccggttt cataatgccc tgaaataaag gctaatgcct cttcttccca gcaccagttc
    15301 tctaagaatt ggcttggcag ctccactgcg tcccacggca caccgttaat gccggcgaca
    15361 tcgcccacgt caatttcagt tagcatatgg tgaatgccgt gtccaaactc gtggaacaaa
    15421 gttgtcactt catcgtgggt aaacaatgcc ggtttatcgc caatcggttt attgaagtta
    15481 caggttaaat atgccaccgg tttttgtaat gtgccgtcag ccaagcgttt ttggttgatg
    15541 caatcatcca tccacgcccc accacgtttg ttttcacgag cgtataaatc taagtagaac
    15601 gagccacgca agcggtcatt tttatcaaaa atattgaaaa aacgtacatc tttgtgccat
    15661 acatccacat ctttttgttc ttccacacgc ataccgaaaa tgcgtttaat tacttcaaat
    15721 aagcctgata atacgcgatt ttccgggaaa tacgggcgaa gttcttcatc attgaccgaa
    15781 tacaatgcct gtttttgttt ttcgctgtag aacggaatat cccataaatc caaatgttca
    15841 atgccgaaat gggctttagc aaattttttc aaatcgcata attcattttt gccttgagct
    15901 ttcgagcgag cggctaaatc gttcaagaaa tctaatacct gttgtggatt ttctgccatt
    15961 ttggtggcta atgaataatc agaataagtc ttaaagccga gaagttgggc tttttcgtga
    16021 cgcagtttta agatctcatc aatcaccgca ctgttatccc atttgcctgc attcgggcct
    16081 tgatcagaag cacgagtcac ataagcacgg tacatttcct cacgcagtgc tttgttttca
    16141 caatacgtca tcaccggcaa atagcttggg atttcaagag tgaagcgata gcctttctta
    16201 cctttgcttt ctgcggataa ttttgccgct tctaatgccg attccggcaa gcctttaagc
    16261 tgtgcttcat cggtaattac aatatcccaa cccattgttg catcaagtac gttgttgcta
    16321 aattgcgagt tgagttccga caagcgtgca gaaatttccc cgtagcgttt ttgtttctct
    16381 gccggcagtg aaatgcctga taattcaaaa tcttgtaagc tgttttcaat cgcctttttc
    16441 tgtgcaaccg aataagtttc aaactcaggg ctgtttttta acttcacata gccttgatat
    16501 aacccttgat gttgccccgc ccaagtgctg tattccgata ataacggcaa gcacgcttgg
    16561 taagcctcac gcaactctgg ggaatttttc accgcattca aatgccctac cggtgaccac
    16621 gcacgggaga atttatcctc tgccattgct tgtggcatat agaaattttc ccacgtcggg
    16681 ttttcaattt gtgcgacttt ttcaacagtt tcacggcatt ctttgatcac cgcttctacc
    16741 gccggtttga tatgttcagg tttgatttgt gagaacgcag gcaagcctgt gtaatttaaa
    16801 agagggttag acattatttt ttccttttat ggtcaaaatg aaaattcgta tcaagataat
    16861 acacaaagtg agagagaaaa gaaaacaagc ggtcatattt caataatttt ttgcaaaaaa
    16921 atcacaaaat atgaccgctt gtctttagaa tttgactgta tgcccgtaac tttcaatgat
    16981 tttttggata cgctctaaat cctctttagg cggtgacatt accccttcca gctcatattt
    17041 atagcctaag gtttcccatt tgtgagcccc taaacgatga taaggcagaa gttccacttt
    17101 ctcaatgtta tccattcctt gaataaactg ccctaaacga tgggcagaat catcgtcatc
    17161 agtataaccc ggcacgacca catagcgaac ccaagtcggt ttatttaatt tgtgcagata
    17221 acgggcgaaa tcaagggtac gcttattcga caccccgact aaatcttggt gaacttcatc
    17281 attgagctgt tttaaatcca gcaagaccaa atcggtcact tcaagcattt catccaccac
    17341 cgggctataa tggcgaacaa aaccattggt atctaagcag gtattaatgc cttcagcctt
    17401 acaggcacga aaccaatccc gcacaaactc catttgcaac accgcttccc cacccgaagc
    17461 tgttacacca ccgccggttg ctttcataaa atgcttataa gtcgtgactt ctttcatcag
    17521 ctcttcaacc gtaatttcct taccaccatc aagatcccaa gtatcacgat tatggcaata
    17581 tttacaccgc atcaaacagc cttgcaagaa cagaataaaa cgaatccccg gtccatctac
    17641 cgtaccgcag gattcaaaag aatggatacg tccaacaaca gacatttgtc acctcaaccc
    17701 tcaaaaaatt ttgagaaatt gtagcaaatt tttatgttgt tcgcagaaat aaatcacacc
    17761 ggtatatttt aagaaaggag aaagtcatac tattttttgc ctatttcagg aataaacttt
    17821 tattaatcta ttgactccat caacatatca accaaatatg tttaaatttt tgcatttttt
    17881 aaagctattt tgaccgctta caagcagtcg gtttttctga aaactttgca aacctagccg
    17941 gcgtggtatt tggcggcgac ctcttttacc agtaagtcga aatcgctttc gtaggtgaga
    18001 tcctgcttga ctcggtattt ttcaaattcg ctgagggcga aagatttagc aatttcagcg
    18061 gtaactttgc cggcatcttg taagatttct cggtcggtgg cggcaagaaa gcggttaagg
    18121 cgggtttccc agtctgccat tgtcatcgga atttggcgtt ctgccatatc ttccgccata
    18181 tccaaatagg cagagaccag ccgttgtagt tgtgctaatt cattatccga taaataattt
    18241 ttggcaacca ccacatcaaa ggggtaaatt ttgccttgcg gagcgtcttt ccaattcgtt
    18301 agccccatat tcggcttttc agcgttggct cgtgccataa tcagctcggc ggcggtatgc
    18361 ccgtgaattg cccaatggag cttgttctgc acggtggcaa aaaagcgttt ggtggcggtt
    18421 gcggtgcggt cgtagtccac ggcggtagcg taaatgtcgg tgattttttg gtagaacttg
    18481 cgttcggata accgaatttc ccgaatacga gcaagctgtt cttcaaagta ttttttgccc
    18541 aaaatcgtgc cgtcattttt cagccgttca tcgtccatcg caaagccttt aatcgcaaag
    18601 ctatgcacga tttcggttgc ccatttgcga aactgcaccg ctcgctcgga attgacttta
    18661 taacccaccg caataattgc cgacagatta taatgcttgg tgtggtagtt tttgccgtct
    18721 tgggcagtta tccaaaaaaa ttggataact gaattttcag ctaactcatt gtcactaaag
    18781 atttttttga gatgatagct aatggttcgt acatcaacat catacaacac cgccatcatt
    18841 ttttggctaa gccatacatt ttcatcggcg taaacggcat caacttggct ttcgccggta
    18901 gctgtaataa aagtgaggta ttccgccaca gaggaacgaa ttaaatcttg cttagacatc
    18961 tctttctccc atatagaaca ctgtaattat aaacaatatt acgaaagctg tgtaaatgaa
    19021 tagccaattt ttcgagcgag atcacaaaaa aaccgcttgc ggcataaatg ctacaagcgg
    19081 ttgattatta ctcacaaaat tgtttccaat tttgttcgct cctacggagc cgtcggcaaa
    19141 gccaacgttc aaaacgcaat gcgttttgtg gctaaaagtt ttgcaaattg taattacata
    19201 ctttcagtga aggtgcgggt aattacgtcc atttgttgct ctttggttaa agagttgaaa
    19261 cgtaccgcat agcctgaaac acgaatcgtt aattgcggat atttttcagg gtgttctacc
    19321 gcatctaata atgtatcacg gtttaacacg ttcacattta agtgctgacc gccttctaca
    19381 gttgcttcgt ggtggaagta gccgtccatt aagcctgcaa ggttacgttt ttgggcttcg
    19441 taatctttac ctaacgcatt tggtacgata gagaaagtat aagaaatacc atctttcgca
    19501 taggcaaacg gtaatttcgc cacagaagtt aatgaagcta ccgcaccttt ctggtcacga
    19561 ccgtgcattg ggttcgcacc cggtccgaat ggagcacctg agcgacgacc gtccggtgta
    19621 ttaccggttt tcttaccata taccacgtta gaagtgatag taagcacaga ctgagtcggc
    19681 gttgcattgc ggtatgtttt gagtttttga attttcttca taaaacgttc aactaaatca
    19741 actgcaatgt cgtccacacg gttatcgttg ttaccgaatt gcggatattc accctcaatt
    19801 tcaaagtcgg ttgctacgtt tttcgctaca ccaaccactt cgccagcttt gtttttgatt
    19861 tcaatatcgg tacggattgg ttttactttc gcatatttaa tggctgaaag tgagtctgcc
    19921 gctactgaaa gccctgcgat accacacgcc attgtgcgga acacatcacg gtcgtgaaga
    19981 gccattaatg ccgcttcgta tgcatattta tcgtgcataa agtggataat gttcagtgct
    20041 gtcacatatt gggttgcaag ccaatccata aagctgtcta agcgggtcat tacatcatcg
    20101 taatctaagt attcacttgt aattgcttca gttttaggcc ctacttggtc gcctgatttc
    20161 tcatcaacac cgccattgat tgcgtataac aaggttttcg ctaagtttgc acgagcgccg
    20221 aagaactgca tcattttacc cacgatcatt ggcgatacgc agcacgcaat cgcatagtca
    20281 tcgttttgga aatccggacg cattaagtca tcgttttcat attgaactga tgaagtatca
    20341 atagacactt tcgcacagta gcgtttaaat gcttccggta attgttcaga ccaaagaata
    20401 gttaagtttg gctccggtga cggccccatt gtgtaaaggg tgtgtaaaat acggaagctg
    20461 tttttggtta ctaaggtacg accgtctaaa cccataccgg ctaaggtttc ggttgcccac
    20521 attgggtcgc ctgagaataa ttgatcgtat tccggagtac gcaagaaacg caccatacgc
    20581 aatttcatta ctaaatggtc gattaactct tgggcttctt gctcggtaat tttgccggct
    20641 tttaagtcac gttcgatata aatatctaag aatgaagaca cacgaccgaa agacatcgcc
    20701 gcaccgtttt gcgatttaac cgctgcaagg taagcgaaat atgtccattg caccgcttct
    20761 tgtgcattgg ttgcaggacc tgaaatatca aaaccgtagc ttgcagccat ctctttcatt
    20821 ttgcctaaag cacggtgttg ctcggcaatt tcttcacgca gttgaatcgt ggcttgaata
    20881 tcttcgccgg attctaaacg agcttgtaat gaggcaaact ggcgttgttt gtctttcatt
    20941 aagaagtctg caccataaag tgccatacgg cggtagtcac cgataatacg accacgacca
    21001 taagcatccg gcaaaccggt aattacacct gatttacggc aacgtaaaat atccggagtg
    21061 taaacatcga ataccccttg gttatgggtt ttacggtatt cggtaaagat ttgttctact
    21121 tcaggtttaa gctcacggcg ataaactttg cacgaacctt tcaccatatt gataccacca
    21181 aacggcataa tcgcacgttt taatggagca tctgtttgca gaccaacgat tttttctaac
    21241 gatttatcaa tataacccgg tgcgtgtgag gtaatggttg atggcgtgtc gcagtcaata
    21301 tcatacggtt cgtgtgtttt gttttctact ttgatcattt ccatcacatc tgcccacaat
    21361 ttgctggttg caggtgttac ttcagctagg aaagactcat caccctcata aggtgtgtag
    21421 tttttttgga taaaatcacg tacatttact tcagtttgcc actcgcctgc ggcaaaacct
    21481 tcccacgctt tttgttgagc gtctgttagt tgagtcattt taagtcctct gtgttagtaa
    21541 gttaaaacgg gaaagcggtg attttttgca aaaaatttgc aaaatttgac cgcttgaatc
    21601 tgaaatctta atgctttcta atgtataaga accactgcat taaaccaatg aaaaacacgc
    21661 caccgacaat attacccagc gttgccggaa ttaagttctt aaacacaaaa tgagatacat
    21721 ctaaatcggc aaattgcgtt gggtcaacat taattgctgt ccaaaattca gggctggcaa
    21781 agtgcgaaat cgcaatcccc atcggaatca taaacatatt tgccacacag tgttcaaagc
    21841 cggaagccac aaacattgca atcggtaaca tcataataaa ggctttatcg gttaggcttt
    21901 tacctgcata agacatccac accgcaatgc acaccataat gttacagaaa atgcctaaac
    21961 agaaagcctc aaaccattgg tggtgaattt tgtgctgtgc ggtatttaaa ataaccaaac
    22021 cccattgccc tttggctgcc ataatctgac cactaaacca aatcaacaat acaatggaaa
    22081 tcgccccaac aaagttaccg aaatacacca ctacccagtt tttaaacatc tgtaaccagt
    22141 taattctttg gctggctctg gctacaatcg taagtgttga tgaggtaaaa agttctgccc
    22201 caaacaccac acacataatc acgccgagtg aaaataccaa accaccaatc agtttagcca
    22261 taccccaagg catttggctc gcacccactt gggttgtggt ataaaataca aatgctattg
    22321 caataaaacc gcccgcagta atggcagaga gaaaggaata taattgattt tttgttgctt
    22381 tataaaccgc accatcttct gcgatttttg ccatttcagc aggagaaaac atcagacaac
    22441 cttaacaatg agaattgaaa aaccgatata ttatgtagaa attatagacc tcttgagata
    22501 atcttcaaat aaaaatatta cacaatcaga ggtatttcga tgtctttttt tgatatagaa
    22561 caaaatccat aaaaaacaca acattcaaga aaatttataa ctacatttta ataacaaacc
    22621 aactacaatt ttatgacaga atatctcact tcctttttca gtttattctt ttccgaacaa
    22681 aatcaactct ttactatgtt tctgagtgga tttctaagcg ctaccctctt acccggaaat
    22741 tctgaaatta tcttcactac cttagcaagc caacatctca tcacttatgg ctctttatcc
    22801 tcattttcac tgttcaattt actcttggtt gcaaccttag gtaatagttt aggtagcata
    22861 accacttatg cgatagggct attactccct cgcccacaga atactaccaa tcgttattca
    22921 caatgggcat tagccaaaag tgaaaaatat ggcgtgttag tcttgctttt tagttggtta
    22981 ccgattgtag gcgatatttt ctgtggcatt gccggctggc tacggtttag cctttggcaa
    23041 agcattctct ttattgtgat tgggaaattg ttacgttatc tgtttttgct ggcaactctc
    23101 tattcggtgt taccgcatat tttatagaaa acaaaagcgg ctgttttgca aaaaatttta
    23161 caaaaacaac cgcttgtgct ttataagttt cttaacgctt caatacgttt ttctaacgga
    23221 gggtggctca taaacaactc tttaccacgg ctaccgttaa tcataaaggc agcaagagag
    23281 ccttccattt cttgcggttc gtgaacacgt tgcaagcgtt gtaatgccgc aatcattttc
    23341 tctttaccga ctaattgagc agagcctgca tctgcacgaa attcacgttg gcgagagaac
    23401 cacattgcaa tcattgttgc taacacacca aacaccatct gtaacacaat atctactacc
    23461 cagaacacca gcgtattggt gcttgaattg ccattttcgt cacgtgaact tgccgccatt
    23521 gtcgaaataa tacgagctaa gaaaatgacg aaagtattta acacgccttg taataaagtc
    23581 attgtaacca tatcgccatt cgcaatgtgc gccacttcgt gtgctactac cgcttcagct
    23641 tcgtctttag tcattgaatt cagcaagccg gtgctgactg caactaaaga attacttttc
    23701 gttgctcctg tagcgaatgc atttacatca gccgaatggt aaatcgcaat gtccggcatt
    23761 gggatattcg cttgctgagc ctgacgttgt acagtgttga ataaccattg ctccgcttcg
    23821 ttacgaggct gtgtaatcac ctctgcccca accgaacgca atgccattga tttcgacata
    23881 aatagcgaaa ttaaagaccc actgaaaccg aagactaacg aaagcaccaa aataccggca
    23941 gtgctttgcc cttgaatgcc ggtcacttta aaaataaggt ttaatacgat ccctaaaaca
    24001 aaggtaatcg ctaagttagt taataaaaat agaatgacac gttttgccat aatgttttca
    24061 atctccaaaa atatagatgc aatgattgca cgaataagat aatgacttta gccttaattt
    24121 caagtcatta tttacaatta ttcccacaaa tttaactgtt tattcacttt tttctcggga
    24181 aagtgaacac ttagaccgat taatcgcacc tttcgttcct ttcttcgggt aaaaatttgc
    24241 tgtagcaact cgccaaatcg ctcatacgca aagccatcgg tggttcgttc aagcgtggtt
    24301 tggctaaaat catcaaactt gagtttaatg cctaactttt taaactcagt taatggcgta
    24361 tcgccccagt ttcgttgcaa ccgaaaaacc agtttgtcga ataaatctgc cacaatcttt
    24421 tccgcttgct caagggttga aatatcgtgc aacagcgtat tttccaccgc cagcgatttt
    24481 ctttcacgat aaggctctac cgctcgttca tcaataccgt ggctaaaatc ccaaagccgt
    24541 tgcccgaatt tgccaaacgc tcggtaaata accgcttttt ctgcttgctg aatatcacca
    24601 caggtttcaa agccaagctg ttttaatttt tcattggtta ctttccccac acccggaatt
    24661 tttgcaagcg gtagattttt cacaaaattt tgcacatcat caggcgtaat cacacattgt
    24721 ccgttaggtt tgttttgatc ggaggtaatt tttgctaaaa atttaagcgg agcaactcct
    24781 gccgaggcag ttaaatgcaa ttcattgaaa atatcattgc ggattgcttg agcaatccaa
    24841 gtggcggagc caaaatagcg ttcgcattcg gttacatcta aataggcttc atcaagcgac
    24901 aaggcttcaa tcacatccgt atagcgatga aaaatttcgt gaatttgagc ggaaaccgat
    24961 ttatacaacg ccatattcac cggcaataaa attaaattcg ggcatttctt caacgcagtt
    25021 gccgttggca ttgcactgtg taagccgaat tttcgagcct cgtaattaca ggttgtcagc
    25081 acacctcgtt gattagcatt gccgcccacc gccaccggct taccgaccaa cgccgggttt
    25141 tcccgcattt cgaccgctgc ataaaaacaa tccatatcaa tatggataat ttttcgctta
    25201 tgtttagctt gaatcgacat ttgcaatatt ttccccaaaa acgaccgctt gcaacacaaa
    25261 taactgtata taaaaacagt tttattttat gcccttattg ttagaatttc aagtttaaaa
    25321 atagcgataa aaaggataaa aaatgctcta cggtttagcc attgtgctga ttccactttt
    25381 tctcggttac ttaataaccc tcaaaaacca ccgccatatg gcaatagtaa acagagtggt
    25441 cagcctctgc ctttacttga ttttattagt gatggggatt tctctcggac aaattgataa
    25501 cattctcacc gaactgccac agattggcgg tacggcgttt agtttagtgg tgattttact
    25561 cctttcaaac attatcggct tggtgattta cgacaaatta caaccgatga aaagagacaa
    25621 agtcaatcaa gatcaacttc cctcccgcct gcatttgttg attgattcct ttaaattaat
    25681 cggcattacc ttattaggcg ggatcatcgg ctatttcacc aaaggcgtgg tggatttccc
    25741 tctgcacgcc agcacctatg tgttagaagt gatgattttc ggggtgggga ttcaactgcg
    25801 aaacagcggt attcccctgc gtgaagtgtt ctttaacaag cgggggattt atacctcgat
    25861 tgtaatggtg gcaagttccc tgattggtgg cgtgatttcg gcattcacct tagatttatc
    25921 ccttgctaaa ggcttaacct ttgcctctgc attcggttgg tattcccttt caagcgtatt
    25981 ggtaaacgat gcttggggcc cgatttacgg cagtattgcc ttttttaacg acatctcgcg
    26041 tgaaatttta tgcctgtttt tagtaccact gtttatgcgt caatttccgt ccaccgcagt
    26101 cggcattggc ggagcgactt cattagattg tatgctccct attattcaaa aatcgggcgg
    26161 tattcaaatt gtgccgctgg caatcagctt cggttttatt gttaatttag ccgctccatt
    26221 gttattagcc gtttttattg ggctggaagg ataaatcacc gcttgtttgc ttttatttat
    26281 ccatcttcgc tgaattttcc gctataatcc ttaagttttc cccgaaactt gggatattta
    26341 ttttcaaaag gataatttta tgatgcgttc tcactactgc ggtgcattaa accgctcaca
    26401 ccttggacaa acagttacct taagcggttg ggttcatcgt gttcgtaacc ttggtcgttt
    26461 tatttttatg caaattcgtg atcgtgaagg cattgtgcag gtgtttttcg atgagaaaga
    26521 tgaagcactt ttcaagcaag catcggcctt acgttctgag gcgtgcgtgc aaattcaagg
    26581 tgaagtgatt gcccgtgatg aatcgcaaat caataaagag atggcaaccg gtgaaattga
    26641 agtgttagta aaaaatttag tggtgtataa caacgctgaa gtattgccgt tagacttcaa
    26701 tcaaaacaat accgaagaac agcgtttaaa ataccgctat ttggatttac gccgccctga
    26761 aatggcagaa aagctcaaaa cccgtgctaa aatcaccagt tttgtccgcc gttttatgga
    26821 cgataacggt ttcttagaca ttgaaacccc gatgctgacc aaagctactc ctgaaggtgc
    26881 gagagattac ctcgtgccaa gccgtgtgca taaaggcaaa ttctatgctc tgccacaatc
    26941 acctcagcta tttaaacagt tgctaatgat gtcgggcttc gaccgttatt accaaatcgt
    27001 gaaatgtttc cgtgatgaag atttgcgtgc cgaccgccag ccggaattta cccaaataga
    27061 cgtggaaacc agctttatga ctgccgaaga agtgcgtgca ttaatggaag cgatgatcca
    27121 cggcttatgg aaagagacct taggcgttga tctcggtaaa ttcccaatga tgacgtggaa
    27181 tgaagcaatg acccgtttcg gttcagacaa accggatttg cgtaacccac tggaaatggt
    27241 tgatgtggca gatattttaa aatcggttga tttcaaagta tttagcggtc cggcgaatga
    27301 tccgaaaggg cgtgtagtgg cacttcgtgt gccaaacggt gcagctctaa cccgtaaaaa
    27361 tattgatgac tacacccaat ttgtcggcat ttatggggca aaaggcttgg cttggttaaa
    27421 agtgaatgat atgaacacag gtttagaagg cattcaaagc ccggttgcaa aattcttaaa
    27481 tgaagaagtg ctaaaagcct tagttaaacg cttaaacttg caaaaagacg acattgtatt
    27541 cttcggtgcg gataactggc acgttgcgac taacgccatc ggtgcgttac gcttaaaagt
    27601 ggggaacgat ttaggcttaa ccgataccac agcgtggaaa ccgttatggg tgattgattt
    27661 cccaatgttt gaacgtgatg atgaaggcaa cttatcggca atgcaccacc cgttcacttc
    27721 accgaaagaa ttatcgccgg aagaattagt gcaagatccg gaaaatgcgg tggcaaacgc
    27781 ttacgatatg gtaattaacg gctacgaagt gggcggtggc tcggtacgta ttttcagcca
    27841 gcagatgcaa caaaccgtgt tcagcatttt aggcattaac gaagaagagc aaaaagagaa
    27901 attcggtttc ttattagatg cgttaaaatt cggtactccg ccacacgcag gcttagcctt
    27961 cggtttagac cgcttaacga tgttgattac aggaactgat aacattcgtg atgtcatcgc
    28021 tttcccgaaa accaccgctg cagcgtgttt aatgacagaa gcaccaagct atgcgaatcc
    28081 gaaagcgttg gaagagttag caatccgtac aattccacaa gagtaatcgg taggggcgaa
    28141 acatttttcg ccctttttat ttaacaagcg gtcgaaaaag tgaaaaactt tgcaaaagta
    28201 ataatcgcaa aattattctc taaataacat aataaagact cttttctctt ctctatgtta
    28261 ctactaaata tcccctatta ttttaattat taccttattt gggtattgag cagatttatg
    28321 ccgaacaaga taatcgcgct gaataatt
//
LOCUS       DANMCL010000027        27162 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.027, whole genome shotgun sequence.
ACCESSION   DANMCL010000027 DANMCL010000000
VERSION     DANMCL010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 27162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27162
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.027"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            41..1375
                     /locus_tag="PXF40_001048"
     CDS             41..1375
                     /locus_tag="PXF40_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5802401.1"
                     /translation="MLYAEFLLLLAFLYAGSRYGGIGLGVVSGIGLFVEVFFLGMPLS
                     APPISVMLVILAVVTCASILEAAGGLKFMLQVAERILRSNPKRITFLGPLVTYLMTLM
                     LGTGHSVYSIMPIIGDIALKNKIRPERPMAAASVASQLGITGSPLSAAVAYYLTEIVK
                     LPGFEGVTLLNVVGVTITATFCGVIAMSLYSLRRGKELEDDPEYQRRMQDPELRKQIE
                     QTSATSLDEKLPASAKNSVYLFLAAIATIVIIAMIPAIKPTVAATGKVAGMDQIIQIV
                     MLTFGGLILILTKTDPKKVPNGIVFKSGMVATIAIFGIAWMSDTYFTHAMPAFKEGVT
                     EMVRAQPWTFAFALFAVSVVVNSQAVTAKMLLPVGIAMGLPAPLLVGLMPATYAYFFI
                     PNYPSDIATVNFDVTGTTKIGKYYFNHSFMAPGLVGVITACIVGIAVANVLI"
     gene            complement(1455..1865)
                     /locus_tag="PXF40_001049"
     CDS             complement(1455..1865)
                     /locus_tag="PXF40_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5802402.1"
                     /translation="MNSTLTNLQPLAFLITRVVAGYMFLLHGTAKFFEFPMSMTNGNG
                     SVPLASIYGVGGILEIVGGIFFILGLFTRQTAFILSGMMAYAFFIAHGAQGNVLLPLL
                     NGGELAGVYSVLFLTYIFIGGGKYSLDAKLFNKA"
     gene            complement(1988..2665)
                     /locus_tag="PXF40_001050"
     CDS             complement(1988..2665)
                     /locus_tag="PXF40_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HDL5802403.1"
                     /translation="MNLFGFRCFHCNHPLAIGVQGICSHCQKLLKPTPYCRHCGMSAV
                     EFRNACGYCLKNEPKWHKLVRVNEYRAPLSHWVHQFKFQQQYWWDQALARQLLLAIKQ
                     AQREQVLSLPEVIMPVPLFWHRHWKRGFNQSELLCDWLSKWLQIPLDTQSLQRVRATV
                     SQRELTAAERRKNLRGAFFYQPLKAYKRVAIVDDVLTTGSTLNVICAELLKAGVVEIQ
                     VWVLARA"
     gene            2783..3595
                     /locus_tag="PXF40_001051"
     CDS             2783..3595
                     /locus_tag="PXF40_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5802404.1"
                     /translation="MKSLQKPIKIVFFDIDDTLYVKHKAYIPKSITEQVLPRLKAKGI
                     IPAIATGRNHGCFPEALKPYLNPEIGFELFVTINGQYNFYKDQIISDYSLSREQIERI
                     IEKANALGILYAFITPMTIAVSETNPIVHEAVLPITPNYLIDPHYYEKEKIVQMLLFY
                     TEEQKQAVENSGIFANDLKEARWHPNAVDILRKENSKARGIQDVLATLNIEIESAMAF
                     GDGINDLEMLPTVGVGVAMGNGVPELKAVADFITKPLEEDGILYALETLEVI"
     gene            complement(3643..3912)
                     /locus_tag="PXF40_001052"
     CDS             complement(3643..3912)
                     /locus_tag="PXF40_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5802405.1"
                     /translation="MGLLYLLLLNTLIGYGSYGEALNHWDTSKVSIVTTMLPIFTMIF
                     SNLSYYFYPHIFAKPDMNWISYLGALVVVSGAILAIAGDKLFRRN"
     gene            complement(3885..4562)
                     /locus_tag="PXF40_001053"
     CDS             complement(3885..4562)
                     /locus_tag="PXF40_001053"
                     /inference="COORDINATES: protein motif:HMM:NF013088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5802406.1"
                     /translation="MKQRPLLGFSLALTAAMTWGTLPIAAQQVLKVIDAQTLVWVRFV
                     VASVGLLLILGFAKRLPKLTACSKKELGLILLGVCGLSANFFLFAEALHYVSPTINQV
                     LWQLAPFSMILLGVLLFKEKFGLFQKIGFVLLIAGLVAFFNDKFAEILQLNTYALGVL
                     LSAGASLIWVLYGVAQKLLLAKFNSQQVLFIIYIGCSLLMLPFASPAQLGNLEDGFLW
                     GCFIYCC"
     gene            complement(4664..4921)
                     /gene="rpmA"
                     /locus_tag="PXF40_001054"
     CDS             complement(4664..4921)
                     /gene="rpmA"
                     /locus_tag="PXF40_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HDL5802407.1"
                     /translation="MATKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGSNVGMGKDHTLFATADGKVKFEVKGEKSRKYVSIIAD"
     gene            complement(4942..5253)
                     /gene="rplU"
                     /locus_tag="PXF40_001055"
     CDS             complement(4942..5253)
                     /gene="rplU"
                     /locus_tag="PXF40_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HDL5802408.1"
                     /translation="MYAVFQSGGKQHRVSEGQVVRLEKLELATGEKVEFDSVLMVVNG
                     EDVKIGAPVVAGAKVVAEVVAQGRGEKVKIVKFRRRKHSRKQQGHRQWFTEVKITGIQ
                     A"
     gene            5531..6529
                     /gene="ispB"
                     /locus_tag="PXF40_001056"
     CDS             5531..6529
                     /gene="ispB"
                     /locus_tag="PXF40_001056"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HDL5802409.1"
                     /translation="MAVQLFSLEQIQALANEDMQAVNAEILAQLNSEVLLINQLGHYI
                     IAGGGKRIRPLIAVLAARALGYRGKKHITAAAFIEFVHTATLLHDDVVDESDMRRGRP
                     TANAHFGNAASVLVGDFIYTRSFQMMTDLDSLRVLKVMSAATNALAEGEVQQLMNVND
                     PNTTEANYMRVIYNKTARLFEAATQCVAIAADASEEIETALKNYGCYLGTAFQLIDDI
                     LDYSAQSESLGKNVGDDFVEGKPTLPLLHAMHAADKAGKTTQAELIRNAIENGGELEQ
                     IPQVLAIMQEHQSLDYAMQKAREEAQKAVDSLGVLPESEYKQALVSLAYLSVDRSY"
     gene            6632..7378
                     /locus_tag="PXF40_001057"
     CDS             6632..7378
                     /locus_tag="PXF40_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HDL5802410.1"
                     /translation="MTEQNQRPQEHIESVRARRRAQNQKKGPNAPFVREKLTLPNGHN
                     KLLLHSCCAPCSGEVMEAIHASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAEKWGIP
                     FIDLDDDYENDRKEWFKKAKGMEWEPERGIRCTMCFDMRFEKAAEYAHNNGFPVFTSC
                     LGISRWKDMNQINDCGHRAAAKFDDVVYWDYNWRKGGGSQRMIEISKRERFYQQEYCG
                     CVYSLRDSNKWRLETGRQRIEIGKLYYSPD"
     gene            7795..8730
                     /gene="fabD"
                     /locus_tag="PXF40_001058"
     CDS             7795..8730
                     /gene="fabD"
                     /locus_tag="PXF40_001058"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HDL5802411.1"
                     /translation="MSKFAMVFPGQGSQAVGMLADLAPQYPIVEETFKQASDVLGYDL
                     WDLVQNGTAEELGQTHRTQPALLASSVALFRIWQQKFPEQKPAVMAGHSLGEYSALVC
                     AGVLDFQDAIKLVELRGRAMQEAVPAGSGAMFAIIGLDNESIIKACEQAASETGEIVS
                     AVNFNSPGQVVIAGTKAAAEKAGELCKAAGAKRALPLAVSVPSHCALMKPAAEKLAEA
                     LQNIELNQPLVPVINNVDVAVETDADTIRNALVRQLYSPVRWTETVEKMAQDGITTLY
                     EIGPNKVLTGLAGRIVKELSAKAVNDVASFEAVEA"
     gene            8747..9211
                     /locus_tag="PXF40_001059"
     CDS             8747..9211
                     /locus_tag="PXF40_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802412.1"
                     /translation="MSKETLFMLISALIALVILPLAYTVGIAKETLGGNMGMLSIAAG
                     CSFLAYFLSLNPKIRHAFIGGSAITAAAIQAWVLYGVLLSENDPKSAVVLFQIYLFSS
                     LGPLFFSAIWAFTRPRWIYPKQGSAVKYALFGGLTTVINYLITLFIFYILTL"
     gene            9232..9954
                     /gene="fabG"
                     /locus_tag="PXF40_001060"
     CDS             9232..9954
                     /gene="fabG"
                     /locus_tag="PXF40_001060"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HDL5802413.1"
                     /translation="MSKIALVTGATRGIGKAIAEELVAKGYIVVGTATSEKGAESISA
                     YLGENGKGLVLNVADAESIESVLKQIKETFGDVDVLVNNAGITRDGLLMRMKDEDWFD
                     IIQTNLTSVYRLSKAVLRPMMKKGGRIITIGSVVGSMGNPGQTNYCAAKAGLVGFSKS
                     LAKEVASRGITVNVVAPGFIATDMTDELTEDQKNAILSQIPAGELGSPQDIAKAVAFL
                     ASDDARYINGETIHVNGGLYMS"
     gene            10073..11371
                     /gene="brnQ"
                     /locus_tag="PXF40_001061"
     CDS             10073..11371
                     /gene="brnQ"
                     /locus_tag="PXF40_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transport system II
                     carrier protein"
                     /protein_id="HDL5802414.1"
                     /translation="MTRNTLVVGFLLFAIFFGAGNLIFPPKLGYESSTEFFSAISGFV
                     LTGVGLPLLGIIVSAFYNGGYKSALDKIHPWFSLAFLTSIYLAIGPFFAGPRTAATAY
                     EMAIMPFLGDSSQVSMLIFTLIYFAFTLWLALNPNKMVDRIGAILTPILLITIIGLVI
                     RAGFILDTDPQITTPNTNEQSYFFKGMVDGYLTMDALASLAYSVIVLNAIRGKGVSQA
                     ALQRQTVSAGLVAAVALAVIYISLGWIGNNMPISANTLSMLSERKLDLGTYILNTVTT
                     QAFGELGRSVLGVIVSLACLTTAVGLAVSVSEYFNEIFPKISYKVYAILFTVISFTVA
                     NQGLKEVISKSIPVLLVLYPIAMTVILMLLINLVIKLPLSAQRLSLLLVTIVAIASVA
                     GVGFTENLPLKSYSMEWLPFAIIGAIIGAIIHPLTGRKHK"
     gene            11417..12241
                     /gene="mutM"
                     /locus_tag="PXF40_001062"
     CDS             11417..12241
                     /gene="mutM"
                     /locus_tag="PXF40_001062"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HDL5802415.1"
                     /translation="MPELPEVETSVRGVSPYLVGQTIEQIIVRQPKLRWTVSPELSQM
                     AGAKITAVERRAKYLIIRTDKGDILVHLGMSGSLGILQERQQKEIGKHDHVDLITQNG
                     TILRYNDPRKFGCWLWAEKAEDHELLRKLGPEPLSNDFTADYLFAKSRKKTTACKTFI
                     MTNEVVVGVGNIYACESLFMAGIHPELAAQNLTKKQCERLVKTIKEVLTKAIIQGGTT
                     LKDFIQPDGKPGYFAQVLQVYGRKGETCNDCGKPIETKVIGQRNTYFCPKCQRLPK"
     gene            complement(12324..12758)
                     /gene="dtd"
                     /locus_tag="PXF40_001063"
     CDS             complement(12324..12758)
                     /gene="dtd"
                     /locus_tag="PXF40_001063"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HDL5802416.1"
                     /translation="MIGLIQRVKFAKVEVEGQVVGEIASGLLVLLGVEKDDDEAKADK
                     LLEKVLNYRVFSDSEGKMNLNVQQAGGSLLVVSQFTLAADTNKGLRPSFSKGASPVDA
                     ERLYAYFHQQAATKIHTQTGQFAADMQVSLQNDGPVTFWLQV"
     gene            complement(12733..13578)
                     /locus_tag="PXF40_001064"
     CDS             complement(12733..13578)
                     /locus_tag="PXF40_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
                     /protein_id="HDL5802417.1"
                     /translation="MLNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLF
                     SIFTFFPIFHEANEQLKAFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVT
                     IMLIKSIDEALNTIWHDNRQRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFN
                     GNGALSLGQHLLELMPFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKA
                     FIWYITAFPSYQAIYGALAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDKGSINDR
                     LNSAG"
     gene            complement(13580..14818)
                     /gene="proA"
                     /locus_tag="PXF40_001065"
     CDS             complement(13580..14818)
                     /gene="proA"
                     /locus_tag="PXF40_001065"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HDL5802418.1"
                     /translation="MQMIELAQQAKQASFELAQFGNLQKNQALLTIADSLEQRAEEIL
                     YANAKDIEFAQAQGISLAIIDRLLLNEDRLKDIANDVRNVAKLADPVGQVMDGGVLDS
                     GLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVDVV
                     QDALEKAGLPKLAVQAVTDPDRALLLELLKLDRYIDMVIPRGGAGLHQFCKENSTIPV
                     IVGGIGVCHLFVEKTADQEKSLEVIANAKTQRPSTCNTLETLLVEKAIAVEFLPKLVA
                     KMQQLGVTIHSNDLQKIEGIEPLDQAKLSQEWLSLDLNVVVVNDLQQAVEHIRHYGSQ
                     HSEGILTSDYQLARQFVQQVDAAAVYINASTRFTDGGEFGLGAEVAVSTQKLHARGPM
                     GLEALTTYKWVCEGDYLVRG"
     gene            15102..16985
                     /gene="mutL"
                     /locus_tag="PXF40_001066"
     CDS             15102..16985
                     /gene="mutL"
                     /locus_tag="PXF40_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HDL5802419.1"
                     /translation="MINTTPKQLIHILPPQLANQIAAGEVVERPASVVKELVENSLDA
                     GANTIQIDIEKGGSQLIRIRDNGCGISKQDLPLALARHATSKISSLEDLEAILSLGFR
                     GEALASISSVSRLTLTSRTAEQTEAWQAYAQGREMAVEIQPASHPIGTTIEVANLFFN
                     TPARRKFLRTDKTEFAHIDEVVRRIALAKPNISFSLSHNGKIVRQYRKVQDNSVEQQQ
                     KRVAAICGDEFIQHSTYIDRQHGDLHLHGWVGSPALARLQNDLCYSYVNGRMMRDKTI
                     NHAIRQAYGDSIASGYYPAFVIFLDLDPTMVDVNVHPAKHEVRFHQGRLVHDFILQGV
                     LNSLQQTQPTLELRNEVNEPLPSYVQDTNRQAAGQNIFVSQTAPQAAEFTQKNASRSS
                     YTPKFERSNSVSSSAQKWYKELVGGDLHQTTPTIKTQSTLVEPKTEPQTEHKTEAVSQ
                     KITQIAPLASHHSQALAIVKNQAVLIKEEENFYLLPLATLAELKLKLQLEKGQSQALL
                     IPLNLSLDQQQTERWQQTKEELTKLGFSISEKQWQAQTRLTVLSVPQAVREQNLQQLL
                     FALFNQTQAVNLAEFFAKKCEKPTACTLSDVIALLSEIELYANGKKELEGIRKEVDFS
                     KFL"
     gene            complement(17004..17273)
                     /locus_tag="PXF40_001067"
     CDS             complement(17004..17273)
                     /locus_tag="PXF40_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5802420.1"
                     /translation="MREIEYSNAFKRDYKKCAVESLSSSLIEALYFLINDKPLPEKYC
                     DHALTGEWKGFRDCHIQPDLVLIYRKVEDDKLELLRIGSHSHLFG"
     gene            complement(17260..17526)
                     /locus_tag="PXF40_001068"
     CDS             complement(17260..17526)
                     /locus_tag="PXF40_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5802421.1"
                     /translation="MANSALVSVRISPEIKEQASEVLAGIGLTVSDVMRMTLAKIATE
                     KRFQFDYQPNFETAEVLRAVKNGEEKLHSANSIADLMEQLNARD"
     gene            17966..18919
                     /gene="miaA"
                     /locus_tag="PXF40_001069"
     CDS             17966..18919
                     /gene="miaA"
                     /locus_tag="PXF40_001069"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HDL5802422.1"
                     /translation="MNKKPLALFLMGPTASGKTDLAIALRQELPVEVISVDSALIYKG
                     MDIGTAKPSKEELALAPHRLIDILDPAESYSAMNFHADALREMADITSQGKIPLLVGG
                     TMLYYKALLEGLSPLPSADPAIRAEIESRAAQHGWATLHQELVKIDPIAGARINPNDS
                     QRINRALEVFYITGKTMTELTAQQGEALPYNILQFAIAPQDRAVLHQRIEQRFHKMIE
                     LGFEEEVKRLFLRKDLHINLPSIRCVGYRQMWEYLQGDISLDEAIFKGICATRQLAKR
                     QITWLRGWQGELTWLDSLAPTSSKAKMVEKIDHYLKNCDNI"
     gene            18988..19260
                     /gene="hfq"
                     /locus_tag="PXF40_001070"
     CDS             18988..19260
                     /gene="hfq"
                     /locus_tag="PXF40_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HDL5802423.1"
                     /translation="MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPARALSHNNNNQAQHAQPAAEVTEQAE"
     gene            19280..20665
                     /gene="hflX"
                     /locus_tag="PXF40_001071"
     CDS             19280..20665
                     /gene="hflX"
                     /locus_tag="PXF40_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HDL5802424.1"
                     /translation="MLNESLPNSEENSAFGFALSEASQTTEAASPTDPENQDKAILVH
                     LYLGQHKDVENLLEFKTLAESAGVEVLATLTTSRQSSHIKYYVGQGKAEGIAEAVERL
                     GATVVLVNHQLSPAQTRNLQSLCGCRVVDRTGLILDIFAQRARSHEGKLQVELAQLRH
                     LSTRLVRRVTNQDQQKGGAVGLRGPGETQLETDRRLIKVRIQQLLNRLEKVSKQRNQN
                     RKTRQKADIPTVSLVGYTNAGKSTLFNAITQAGVYAADQLFATLDPTLRRIQVQDVGT
                     TILADTVGFIRFLPHDLVSAFKSTLQETTEATLLLHVIDGSDERKNENIDAVNQVLDE
                     IGALDIPTLLVFNKIDKLEGVEPHIERNADGTPVAVYLSAQENSGIELLFQAIQERLR
                     SNLVCENLLLPVTAGAIYAQFKAENCIKTEHFNEFGERIISIEINEVQWNKWVKQFPD
                     LAEYIELAKWG"
     gene            complement(20887..26958)
                     /locus_tag="PXF40_001072"
     CDS             complement(20887..26958)
                     /locus_tag="PXF40_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5802425.1"
                     /translation="MNKIFKVIFNQTTQKMEVVSELARSQGKAASSTDKRGTIKLAAA
                     SILGGATLISGMAAFMLSATPAEAAVIIDRIEVQQKAPKKVVNGGIDIYTNTSLATDS
                     ITNPYNYFNPGSLSYADRTKLQESNNSVNKEKDSRLLYKSNTTSAIVIGHNAVALDNN
                     RKSRGKPKASGIAIGDYSYSGGGLSIAIGSFSRTASIGSVALGTSARAEGFNSFAAMR
                     QSAAIADYSTAIGSTSWANATASFAIGASATALGDRSFAIGSGTPQTVDGSYGHENRR
                     SIYDGQNNTLAFGTDAFSIGTKAKTNGNHSFAIGTNAWSGGFKLENSNISELGQVINP
                     DTAKVANNAFALGTNTRANSNDTLAFSTNASATGDGSIAFGVNSNTTGIGAIAFGNAS
                     KAWKSNAISIGWNANSHAEKVISIGSHSNASKDGAMAIGDTANSSGNNSVAIGYSANV
                     SKANATAVGTRANITHEGGTAIGFEAKSKGNYATAIAYNSTAKGKNSIAAGVNSTVSG
                     IRAAALGYNNTVSGKDTFVLGSNVTVKTKGSVILGSDSTEATATKEDTATVGTLKYSS
                     FAGDENVVDGDYVSVGNATNARQIKFVAPGKIASNSTDAINGSQLYAVADTLVKTGFN
                     ITADHSGLGGGAKEDNVKLGETVKYTSTDKNVVTTVTNNTIDFGLSDNISVGGKPGKD
                     GSVGVKGADGKDGVTIKPEAIVFHGVDGVNGKDGKDGKASIKVEKGAKGLDGNDGKDG
                     ESKTRIVYEKPNGDKEEVATLNDGLKFGANDGKVHDAKLNTQVDIKGATTNTDWAKFD
                     AGKNIMTQVVGNTITVALAKDLAGLDSATFGTQGDSTVINKDGVTIAKKDPNDATKSN
                     VTLTEDGLSNGGNQITNVDSGLKGKDGQPVKLTEAAGDVLNNAVNVGDLKNTVTETVT
                     EVTTDAFGLKDENNKEFKQNLGTTAKIIGDGNVKTNVVEKDGGHALEVSLVNNITVGK
                     DGEPGKVGIAGKDGKDAIALDGKDGAITVGRPGKDGIDGTIGVNGKDGSAVVLNGKDG
                     SIGLNGTNGKDGLTIKGTEGKPGLVGKDGLPGKDGVTRIQYQPTDGNGDPIGEPEQVA
                     TLNDGLHFKGDDATLVSKKLNETLEIIGGADKDKLTANNIGVNSKDGKLSVQLAKDLK
                     DLNSATFKPQDGENGQEGKGPTTVVNNNGVTITPKDGTDGKAVKLTEDGLDNGGNQIV
                     NVKSGIDGLAGKDGINGKDGKPITSVNDLTDDQLKEVGTNAANINDVVNASNDIIEKG
                     FSIAADNGETDHVKLGETVKYTSKDKNIITTVSDNVIDFTLNNDFTIGGPGKDGSIGV
                     KGADGTVGVTLNGKDGSIGLTGPKGADGKDGASATISVKDGAKGLDGNDGKDGESKTR
                     IVYEKPDGTTEEVATLNDGLRFVGDDGKEIVKKLNETLKISGGDTDLTNLSDNNIGVV
                     NNNGALTVKLAKDIDLTKDGSVTIGDTTVNNDGLTIKDGPSVTKAGINAGDKKIINVQ
                     DGEISATSKDAVNGSQLYQVQEVANAGWNLTANGKDKGNVKPGATVDLNNKDGNIIIT
                     KEGNNVTFGLKNNLTIGGKDGKDGQIGIAGKDGKDGVTIKGDGTITAGRDGKDGVDGS
                     IGATGKDGASVVLNGKDGSIGLTGPKGADGKDGASANIAVKDGAEGVDGTNGKDGLPG
                     ENGKTRIVYETKDKDGKTVTEQVATLNDGLIFSGNNEDVKNRQKLNTEVKVKGEGVDK
                     TASENFKSASGNINVKANGTDTLEVQLAKAIDLTEDGSVTTGDTTVNNNGLTIKDGPS
                     VTKGGIDAKGTKITNVKDGDVTATSKDVVSGSQLYNAMQNTGWYLTVDGNVAETSEKG
                     AQRVNNNGKVAVSGGKNIVVSRKGSTVEVATSSNLEFDSVKVGGTTISSTVAKDGVNE
                     LNIAGSKNAQTRITNVAPGVKGTDAVNVNQLKGAENRLNNRISNVDKDLRAGIAGALA
                     AGNLYHVTQPGKSMVSAGVGAYRGQGAIAVGYSRLSDNGKVGIKFSVNSNSRGDTGAA
                     ASVGYQW"
BASE COUNT         7931 a         6102 c         5317 g         7812 t
ORIGIN      
        1 atacttcttt ctagtgatta ttttttaatt tgaggttctt atgctttatg cagaattttt
       61 acttttatta gcctttttat atgcaggtag ccgttacggt ggcatcggtt taggtgtggt
      121 ttccggcatc ggcttatttg ttgaagtgtt cttcttagga atgccgcttt ccgctccgcc
      181 aattagcgtg atgctcgtga ttttggctgt agttacttgt gcctccattc tagaagccgc
      241 tggcggtttg aaatttatgt tgcaagttgc cgaacgcatt ttgcgtagca acccaaaacg
      301 tattaccttt cttggcccac ttgtcactta tctgatgacc ttaatgctcg gcacagggca
      361 ttcggtttac tctattatgc cgattatcgg tgatattgcc ttaaaaaata aaattcgccc
      421 ggaacgcccg atggcagcag cctctgttgc ttcacaatta ggtattaccg gtagcccact
      481 ttctgctgca gttgcctatt acttaaccga aatcgttaaa ttaccgggct ttgaaggggt
      541 gactttattg aatgtagtcg gcgtaaccat caccgcaacc ttctgtggtg tgattgcgat
      601 gtcattatat agcttacgtc gtggtaaaga gttggaagac gatcctgagt atcaacgccg
      661 tatgcaagac cctgagctac gcaaacaaat cgagcaaacg agtgcaacgt ctttagacga
      721 aaaactaccg gcaagtgcga aaaactcggt ttatctgttc ctagccgcta ttgcaaccat
      781 tgtgattatt gcaatgattc cggctattaa accaacggtt gctgctacag gaaaagttgc
      841 cggtatggat caaatcattc aaatcgtgat gctaactttc gggggtttaa tcttaatttt
      901 aactaaaacc gacccgaaaa aagtaccaaa cggcatcgtt ttcaaatccg gtatggtagc
      961 aaccattgcg attttcggga ttgcttggat gagtgatact tacttcaccc atgcaatgcc
     1021 agcgttcaaa gaaggggtaa cagaaatggt tcgagcccaa ccttggacat tcgccttcgc
     1081 cttgtttgcg gtatctgtag tagtaaacag ccaagccgta accgcaaaaa tgttattacc
     1141 ggtaggcatt gcaatgggct tgcctgctcc attattagtt ggtttaatgc cggcaactta
     1201 tgcttacttc tttattccga attatccgtc tgatatcgca accgttaact ttgacgtaac
     1261 cggtacaact aaaatcggta aatattactt caaccacagc tttatggctc cgggtttagt
     1321 tggcgtaatt actgcctgta ttgtcggtat cgccgttgca aatgtgctaa tttaatttta
     1381 acaaaaaaac aagcggtcag attaagtaaa ttttttacca aatctgaccg cttgattatt
     1441 tactgcaaaa ccaattaggc tttgttaaag agttttgcat ctaacgagta ttttccgcca
     1501 ccgataaaaa tataggttaa gaataatacc gaatacacgc ctgctaattc accgccgttt
     1561 aataaaggta atagcacatt gccttgagct ccgtgagcaa taaagaacgc gtatgccatc
     1621 atacctgaaa ggataaacgc tgtttggcgg gtaaatagac ctaaaataaa gaaaattccg
     1681 cccacaattt ccaaaatacc gcctacacca taaatggagg caaggggtac actgccgttt
     1741 ccgttggtca tcgacattgg aaattcaaaa aatttcgctg tgccgtgtaa taaaaacata
     1801 taaccggcaa caacacgggt gattaaaaac gctaaaggtt gtaaatttgt taaagtagag
     1861 ttcatttgct ttccttaaaa taaattgtga tataaaggtc aattgattga ggcaggcatt
     1921 ctattttaaa aacctatact tcacaatcca gccgtcatga aatagattat ttaccattaa
     1981 taaacaatta ggctctcgct aacacccaaa cctgaatttc tactactcca gctttgagta
     2041 actcggcaca aattacattt aaggtggaac ctgtggtgag cacatcatca acaatcgcca
     2101 ctcgtttata ggcttttaac ggttgataga aaaatgcccc acgcagattt ttccgccgtt
     2161 cagcagcggt caattctctt tgtgagacgg ttgctctcac acgttgtaaa ctctgggtat
     2221 ccagcggaat ctgtaaccac ttcgataacc aatcacacaa taattcgctt tgattaaacc
     2281 ctcttttcca atgtctgtgc caaaaaagtg gtacaggcat aatcacttca ggcaagctca
     2341 gaacctgttc cctttgagct tgtttgattg ccagcagcaa ttgtcgggca agggcttgat
     2401 cccaccaata ttgctgctgg aacttaaatt gatgtaccca atgtgaaagt ggcgctcggt
     2461 attcatttac cctcactaat ttatgccact tcggttcatt tttcaaacaa tagccacaag
     2521 cgtttcgaaa ctccaccgca ctcattccac aatgacgaca ataaggggtt ggttttagca
     2581 atttttggca atggctgcaa atgccttgca cgccaatagc gagtggatga ttacaatgaa
     2641 agcaacggaa gccgaataaa ttcacatttc ctccttttat ttgcagatta tcaaatttag
     2701 ccttattttt tccggctatt tttgtgacat cgctcgaaaa aagagtaaaa tctcattatc
     2761 agtaaataaa aaggaaaccg agatgaaatc cctccaaaaa ccgatcaaaa ttgtcttttt
     2821 cgatattgat gacaccctct atgtaaaaca taaagcctat attccaaaat caattaccga
     2881 gcaggtatta cctcgtttaa aagccaaagg cattattccg gccattgcca ccggcagaaa
     2941 tcacggctgt tttcctgaag ctctcaaacc ttatttaaac cctgaaatcg gttttgagct
     3001 gtttgttacc attaacgggc aatataattt ctataaagat caaataatta gtgattattc
     3061 gttaagccgt gagcaaattg aacgtattat cgaaaaagcg aatgctttgg gtattctgta
     3121 tgcctttatt acgccaatga cgattgcagt ttccgaaacc aatccgattg tgcacgaagc
     3181 ggttttaccg atcacaccga attatttgat cgatccacac tactacgaaa aagagaaaat
     3241 tgtgcaaatg ttactgttct acaccgaaga gcagaaacaa gcggtcgaaa atagtggcat
     3301 ttttgcaaat gatttaaaag aggctcgctg gcaccccaat gcggtagata ttctgcgaaa
     3361 agaaaattcg aaagctcgtg gcattcaaga tgtattagca accttgaata ttgagattga
     3421 aagtgcgatg gcatttggcg atggtattaa cgacttggaa atgctcccga ccgtaggtgt
     3481 tggtgtggca atgggtaatg gcgtgccgga attaaaagcg gtggcagatt tcatcaccaa
     3541 gccgcttgag gaagacggca ttctatacgc tcttgaaact cttgaggtga tttaaaagca
     3601 agcggttgta agtttttctc catttacaac cgcttgtagt ttctaattac gcctaaatag
     3661 cttatcgcct gcaatcgcta aaatcgcccc actgacgacc accaacgccc caagataact
     3721 gatccaattc atatccggct tggcaaaaat atgcggataa aaatagtagc taaggttgga
     3781 aaagatcatc gtaaaaatcg gcaacatcgt ggttacaatg ctaacctttg aagtatccca
     3841 atgattcaac gcctcaccgt atgaaccgta gccaattaag gtgttcaaca gcaataaata
     3901 aagcaacccc acagaaaacc atcctcaaga ttgcctaact gtgccggtga ggcaaacggt
     3961 aacatcagca gagaacagcc gatgtaaata ataaacagca cttgctgaga gttaaatttc
     4021 gctaataata atttttgagc cacgccgtat agcacccaaa tcaagctggc tccggcactc
     4081 aataacactc cgagagcgta ggtgttgagc tgtaaaattt cagcaaattt atcgttaaaa
     4141 aatgcgacaa gccctgcaat caataacaca aatccaatct tttgaaacaa gccgaacttt
     4201 tccttaaaca ataatacgcc tagtagaatc atcgaaaatg gagctaactg ccacaatact
     4261 tggttaatgg tgggcgaaac atagtgtaga gcctctgcaa acaaaaagaa atttgccgac
     4321 agaccacaca cccctaacaa aattaaaccg agttcttttt tgctacaagc ggtcaatttg
     4381 ggtaaacgtt ttgcaaatcc tagaatcagc aatagcccta ctgatgccac aacgaaccta
     4441 acccaaacta aagtttgggc atctatcact ttcaatactt gctgggcggc aatcggtagc
     4501 gttccccagg tcattgctgc ggttaatgca agtgaaaagc caagtaaggg gcgttgtttc
     4561 atcgtggaaa ttcctttttc tattctatgt ttctatattt tagaaagatt gagatacaaa
     4621 aaaaccccgc cattggcgag gtctcttatt gattttgaaa tgattagtca gcaatgatgc
     4681 ttacatattt acggcttttc tcgcctttca cttcaaattt aactttaccg tcagcagttg
     4741 caaataaagt gtggtcttta cccataccta catttgaacc tgcgtggaat ttagtaccac
     4801 gttgacgaac gataatgcta cctgctaata cagattcacc accgaaacgt ttaacaccaa
     4861 ggcgtttagc ttcagaatca cgaccgttac gagttgaacc accagctttt ttagttgcca
     4921 tcttctagat ctcctctgaa attatgcttg aatcccagtg attttcactt ctgtgaacca
     4981 ctgacgatga ccttgttgtt tacggctgtg tttacgacga cggaacttaa cgattttaac
     5041 tttctcgcca cgaccttgtg ctacaacttc agccactact tttgcacctg ctacaaccgg
     5101 tgcaccgatt ttaacatctt caccgttaac gaccattaac actgagtcaa attcaacttt
     5161 ctcaccagtt gcaagttcaa gtttttctaa acgaactact tgaccttcac ttactcggtg
     5221 ttgtttgccg ccactttgga aaactgcgta catatttact ccgctatgtg ccaactgctt
     5281 ttgcttttag gcactaaatt aattcataaa aatagggttg caattctacg gaaaaagatt
     5341 cgaaagagca agagcgattt tgagaatttt ttgaaatttg caaaaaatgg taaaaatact
     5401 accgcttgtt tcaactgcga ctaaaaaaca atagactgct ccgattttac aacaaaatca
     5461 taattctttt ttgaacacag gctaaattaa ggtagaatct actcaatttt cgtcttactt
     5521 tatggattcg atggctgtgc aacttttttc tttagaacaa attcaagccc ttgcgaatga
     5581 agatatgcaa gcggtaaatg ccgaaatttt agctcaactt aattccgaag tgctactgat
     5641 taaccagctc ggacattata tcatcgcagg cggtgggaaa cgtattcgcc cgttaattgc
     5701 ggtgcttgcg gctcgtgcct tgggttatcg tggtaaaaag catatcacgg cggctgcttt
     5761 tattgagttt gtgcatactg ctacactttt gcacgatgat gtagtcgatg aatccgatat
     5821 gcgtcgtggc agaccaaccg caaacgccca ttttggcaat gcggctagtg tattggtagg
     5881 ggatttcatc tatacccgtt cgttccagat gatgacggat ttagactctc tgcgtgtgtt
     5941 aaaagtgatg tctgccgcca ccaatgcgtt ggcagaaggg gaagttcagc aattaatgaa
     6001 cgtgaacgac ccaaacacca ctgaagcgaa ctatatgcgg gtcatttaca ataaaaccgc
     6061 ccgcttgttt gaagccgcca ctcaatgcgt ggcgattgcg gctgatgctt ctgaggaaat
     6121 tgaaaccgca ttaaaaaatt acggttgcta cttaggcacg gcattccagc tgattgacga
     6181 tattttagac tactccgctc aaagcgaaag tttaggcaaa aacgtaggcg atgactttgt
     6241 ggaaggtaag ccaaccttgc cattgctcca cgcaatgcac gctgccgaca aagcaggcaa
     6301 aactactcaa gcagagctga ttcgcaatgc tatcgaaaac ggcggcgaat tggaacaaat
     6361 tccacaagta ttggcaatta tgcaagaaca tcaatctctg gattatgcca tgcaaaaagc
     6421 ccgtgaagaa gcccaaaaag cggtggattc attaggggtt ttaccggaaa gcgagtacaa
     6481 acaagccttg gtttcattgg cgtatttatc ggtggatcgc tcttattaat ttgcaaaaaa
     6541 tcatataaat ttaaccactt gtaggggcaa atgatatttg ccccataacc tataattctt
     6601 ttgggcaaat gttatttgcc ccaacataac aatgactgaa caaaaccaac gaccccaaga
     6661 acatattgaa agcgtacgag cgagacgccg tgctcaaaat cagaaaaaag gcccgaatgc
     6721 cccgtttgtg cgtgagaaat taacgctgcc aaacggacat aacaaattac tgctgcactc
     6781 ttgctgtgcc ccttgctcgg gtgaggtaat ggaggctatt cacgcctccg gcattgagtt
     6841 tacgatctat ttttataacc cgaacattca cccgctgaaa gagtatttga tccgcaagga
     6901 agagaatatt cgctttgccg aaaagtgggg tattccgttt atcgatttag acgatgacta
     6961 cgaaaacgac cgcaaagagt ggttcaaaaa agccaaagga atggaatggg agccggaacg
     7021 aggcattcgt tgcacaatgt gctttgatat gcggtttgaa aaagcagcgg aatacgctca
     7081 caacaacggt ttccctgtat ttaccagttg cttaggcatt tcccgatgga aagatatgaa
     7141 ccaaatcaac gactgtggtc accgtgcagc agccaaattt gatgacgtgg tttactggga
     7201 ctacaactgg cgtaaaggcg gcggctcaca acgaatgatc gaaatcagca aacgtgaacg
     7261 tttctaccag caagaatact gcggttgcgt ctattcgtta agagatagca acaaatggcg
     7321 gttggaaaca gggcgtcagc ggattgaaat cggtaagctc tattactcac ccgattaaat
     7381 gttacttttc tttgcttcgc caaagaaaag taaccaaaag aaaggcgacc cgaacttcgc
     7441 ttagttacga tttccttaac ggaaaatttg taaactcgct acgctcaaac agtacaaatt
     7501 ttcctagaaa tcgcaagtcg ctcagacggg acaagcggta cattattcaa aattttttac
     7561 aaaatatagt gatgtactct tcccttctga accgcccgaa cgtgtttgaa ttggtaggaa
     7621 aatttactct gagcgaagcg aatgtaaatt ttccgtgaaa ccaattcaaa ctaagtgagg
     7681 ataagcggtg aagtaggggt gtttctttgg ttactttctt tgcacatgca aagaaagtaa
     7741 cgaaaactca gatatagatt tcaacttaaa aatttacaga aggaataata acaaatgtca
     7801 aaattcgcta tggttttccc cggtcaaggc tcacaagcgg ttggaatgct tgccgacctt
     7861 gcgccacaat atccaatcgt ggaagaaacc ttcaaacaag caagtgatgt gcttggctat
     7921 gacttatggg atttagtgca aaacggtact gccgaagagt tagggcaaac ccaccgcact
     7981 caacctgcgt tgcttgcctc aagcgtggca cttttccgca tttggcaaca aaaattccct
     8041 gagcaaaaac cagccgtgat ggcagggcat agtttgggtg aatactcagc gttggtgtgt
     8101 gccggtgtgt tggatttcca agatgcgatt aaattggtcg agttgcgtgg tcgtgcaatg
     8161 caagaagccg tgccggcagg cagcggtgcg atgtttgcga ttatcggttt agataacgaa
     8221 agcattatta aagcgtgcga gcaagcagca agcgagaccg gtgaaattgt ctctgcggta
     8281 aactttaaca gcccggggca agttgtgatt gccggcacaa aagcagcggc agaaaaagca
     8341 ggagaattgt gtaaagccgc aggtgcaaaa cgtgcgttac cattagcggt gagcgtacct
     8401 tcacactgtg ctttaatgaa accggcggca gaaaaattag ccgaagcctt gcaaaatatt
     8461 gagctaaatc aaccgcttgt ccctgttatc aacaacgtgg atgtggcagt ggaaacagat
     8521 gccgatacca ttcgtaatgc acttgttcgc caactttaca gccctgttcg ttggacggaa
     8581 accgttgaaa aaatggcaca agatggcatc actactttat atgaaatcgg gccaaacaaa
     8641 gtcctaaccg gtttagcagg tcgtattgta aaagaattat cagccaaagc ggtaaatgat
     8701 gttgccagct ttgaggcggt tgaggcttaa ttttcgggag cgtaaaatga gtaaagaaac
     8761 cctatttatg ctaataagtg cattgattgc cttagtgatt ttacctttag cttatactgt
     8821 tggtatcgct aaagaaacat taggcggaaa tatgggaatg ttatccattg ctgccggttg
     8881 ctcattttta gcctattttt taagtctaaa cccgaaaatt cgccacgcct ttatcggagg
     8941 ttcagctatt acagctgctg ctattcaagc ttgggtatta tatggtgtgc tattaagcga
     9001 aaatgacccc aaaagtgcgg tcgttttatt tcaaatttat ctgtttagta gtttagggcc
     9061 actgtttttt tcagctattt gggcatttac tcgcccacgt tggatttacc ctaaacaagg
     9121 tagtgcggtg aaatatgcct tatttggtgg cttaacgacc gtgataaact acttgattac
     9181 cctttttatt ttttatattc tgacgttata acgtcatact aaggagaatt tatgagcaaa
     9241 atcgcattag ttacaggggc aacccgtgga atcggcaaag cgattgccga agaattggta
     9301 gcaaaaggct acatcgtagt cggcaccgca acctctgaaa aaggggcgga atctatttca
     9361 gcttatttag gcgagaacgg caaaggctta gtgctaaatg ttgccgatgc agagtcgatt
     9421 gagagcgtat taaagcagat caaagagacc tttggcgatg tggacgtgtt agtcaataac
     9481 gccggcatta cccgtgacgg cttattaatg cgtatgaaag atgaggattg gttcgacatc
     9541 attcaaacta acttaacttc ggtttatcgt ttatccaaag cggtattacg cccgatgatg
     9601 aaaaaaggcg gacgcattat cacgatcggt tctgtggtcg gctcaatggg caacccgggg
     9661 caaaccaact actgtgctgc caaagcaggc ttagttggtt tttctaaatc tttagcgaaa
     9721 gaagtagcaa gccgcggcat tacggtaaac gtggttgctc cgggctttat cgccactgat
     9781 atgaccgatg agctaaccga agatcagaaa aatgcgattt taagccaaat tcctgccggt
     9841 gaactcggtt ctccacaaga tattgccaaa gcagtcgctt tcttagccag cgatgatgcc
     9901 cgttatatca acggtgaaac cattcacgtt aatggcggtt tatatatgag ctaatccgct
     9961 acaagcggtc ttttttcaac cgagctttgt aaattcagag ttcggttttg ttatttgtta
    10021 ttttgtgtta tcacctgctt tataggtata ggtgaaaaag tgtgaatatg ttatgactag
    10081 aaatacatta gtagtaggct ttttattgtt tgctattttc tttggtgccg gcaatctgat
    10141 tttcccacca aaattaggtt atgaaagtag tacagaattt ttctcagcca tttcaggctt
    10201 tgttttaact ggagtagggc ttcctctact cggtattatc gtcagtgcat tttataatgg
    10261 aggctataaa tctgcattag acaaaatcca cccttggttt tctttagcat tcctaacttc
    10321 tatctattta gcgatcggtc cattctttgc cggtccgcgc acggcagcaa ctgcctatga
    10381 aatggcgata atgccgtttt taggggattc cagccaagtg tcaatgttaa tttttacctt
    10441 aatttacttt gcctttaccc tatggttagc gctaaatcca aataaaatgg ttgatcgcat
    10501 tggtgcaatt cttaccccga tcttgcttat aaccatcatt ggattagtta ttcgagccgg
    10561 ctttatttta gataccgatc cacaaatcac tacgcctaat acgaatgaac aatcttactt
    10621 ttttaaaggt atggttgatg gctatctaac tatggatgca cttgcttcgt tagcctattc
    10681 ggtaattgta ttaaatgcta ttcgtgggaa aggggtaagc caagccgcat tacaacgcca
    10741 aacagtttct gccggcttag ttgcagcagt tgctctagct gtaatttata tttcattggg
    10801 ttggattggt aataatatgc caattagtgc aaacacactt tcgatgttat cagaaagaaa
    10861 attggatcta ggtacttaca ttcttaacac tgtgactacc caagccttcg gtgaactcgg
    10921 acgtagtgtc ttaggagtga ttgtttcact tgcctgttta accactgctg tcggtttagc
    10981 cgtatcagtc agtgaatact ttaatgaaat tttcccgaaa atttcatata aagtttatgc
    11041 tatcttattt actgtgatta gttttactgt tgctaaccaa ggattaaaag aagttattag
    11101 caaatccatt ccggtattat tagttctcta cccaatagca atgactgtca ttttaatgtt
    11161 gctgattaat ttagtgatta aacttccgtt gtctgcacaa cgtctatcac tcctattagt
    11221 gacaattgta gcgatagctt cagttgccgg tgtcgggttt accgaaaact tgcctctaaa
    11281 atcctactcg atggaatggc tacctttcgc tatcattgga gctattattg gagcaattat
    11341 ccacccgctt accggtcgaa agcataaata aagtaaaggc agtgagcatt cactgcctct
    11401 tttttaggag agaataatgc ctgaattacc cgaagttgaa accagcgttc gtggtgtatc
    11461 gccctatttg gttgggcaaa ctattgaaca aatcatcgtt cgtcagccaa agttacgttg
    11521 gacggtgagt cctgaattaa gccaaatggc aggggcaaaa attaccgcag tagaaagacg
    11581 tgccaaatat ctgattatcc gcaccgacaa aggcgatatt ttggtgcatc tgggaatgtc
    11641 cggctcgctc gggattttgc aagaacgtca acaaaaagaa attggcaaac acgaccacgt
    11701 cgatcttatt acccaaaacg gcacaatttt acgctataac gaccctcgca aattcggctg
    11761 ttggctatgg gcagaaaaag cagaagatca cgaactgttg cgtaaactcg ggcctgaacc
    11821 gctttcaaac gatttcacag cagattactt atttgcaaaa agccgcaaaa aaacgaccgc
    11881 ttgtaaaacc tttattatga ccaatgaagt ggttgttggg gtggggaata tctatgcgtg
    11941 cgaaagttta tttatggcag gcattcaccc tgagcttgca gcacaaaacc tgactaaaaa
    12001 acagtgcgaa cgtttagtaa aaaccatcaa agaagtgctg actaaagcga ttattcaagg
    12061 cggcacaaca ctgaaagatt ttatccaacc tgacggcaaa ccaggctatt ttgctcaagt
    12121 gttgcaagtg tatggaagaa aaggggaaac ctgtaatgac tgcggaaagc cgattgaaac
    12181 taaagtaatc gggcaacgta atacctattt ttgcccgaag tgtcagagat tgccgaagta
    12241 atctaataat aaactctctc cccctgaggg agagagacag cttgttgaaa cgttaagtga
    12301 aacaagcaga gagagggtaa aacctaaacc tgcaaccaaa aggtaacagg cccgtcattt
    12361 tgtaggctga cttgcatatc ggctgcaaat tgcccggttt gggtatgaat cttagtggcg
    12421 gcttgttgat gaaagtaggc atacaaacgt tcggcatcaa ccgggcttgc tccttttgag
    12481 aaactaggac gcaagccttt attggtatcc gccgcaaggg taaactgtga aaccactaac
    12541 aaactgccac ctgcttgctg tacgtttaag ttcattttcc cctcgctatc cgaaaacacc
    12601 cgataattca gcactttttc cagtagctta tctgctttcg cttcatcatc gtctttttcc
    12661 acaccgagca gcaccaacaa accgcttgca atttcgccaa cgacttgccc ttcaacctcc
    12721 acttttgcga atttaacccg ctgaattaag cctatcatta atgctcccct tgtctgtttc
    12781 catttcgtct aaaaccgccg caaattgccc gccaagtaat accacctgcc aacttaactg
    12841 aatccataac agcataatcg gtaacaccgc taatgctcca taaattgcct gataagacgg
    12901 gaaggcagta atataccaaa taaaggcttt cttccctaaa gtaaagaaaa tcgctgccat
    12961 taatgccccg atagcagcgt gttgaaattt tacctttcta attggaataa atttatacac
    13021 taaggtaaaa agtagccaaa ttagcaaaaa cggcatcaat tctaataaat gctgcccgag
    13081 cgataacgct ccatttccat taaaaataga aagcgacatt acataggtgc taatcgcaat
    13141 gctagcaccg gcaagcagcg ggccaaacag caaaatgaga aagtaaagca agaaagagaa
    13201 ccacatcgga cgctgacgat tatcgtgcca aatggtattc aatgcctcat caatactctt
    13261 aatcagcata atagtaacca caaataagcc gataaaactt accagcccca tttgtttggc
    13321 attactgaca aacaactcaa tgtattccga caccatctcg ctcgcactcg gggcaaagtt
    13381 gtcataaatg aacgctttta actgctcgtt tgcttcgtgg aaaatcggaa aaaaggtaaa
    13441 aatggaaaac agcacgacaa taaacggcac tatcgccagc attgtgctat aagtgagata
    13501 accggctgaa atcgcaatgt tattttcatt gtaacgcttg gcaaagagct taataaatct
    13561 ccacagtcga tttaacatct taacctctca ccaaataatc gccttcacac acccatttgt
    13621 aggtggttaa ggcttctaat cccatcgggc ctcgtgcgtg taatttctgc gtgctaactg
    13681 ccacttctgc ccctaaacca aactcaccac catcggtaaa acgggtgctg gcattaatat
    13741 aaaccgccgc ggcatcaacc tgttgtacaa attgacgggc aagttgataa tcggaggtta
    13801 aaatcccctc tgaatgctgc gaaccataat ggcggatatg ctctaccgct tgttgcaggt
    13861 cattcaccac caccacgtta agatcaagcg ataaccactc ttggctcaat tttgcttgat
    13921 caagcggttc aattccttca attttttgca aatcgttact gtgaatagta acgccaagct
    13981 gttgcatttt ggcgaccaat ttcggcaaaa attccaccgc aatcgctttt tccaccaaca
    14041 gcgtttccag cgtattgcaa gtgcttgggc gttgcgtttt ggcattagcg atgacctcta
    14101 gagatttctc ctgatccgct gttttttcca caaacagatg acaaacccca atccccccca
    14161 caatcaccgg aatggtcgaa ttttctttac agaattgatg taaacctgca ccgcctcgag
    14221 ggatcaccat atcaatgtag cgatctagct tcaatagttc caataataag gctcgatccg
    14281 gatccgtcac cgcttgcact gccaatttcg gcaagccggc tttttctaac gcatcttgca
    14341 ctacatcaac caacacagca ttggtaaatt tggtctcttt accgccacgc aaaatcactg
    14401 cattgccggt ttttaggcat aatgatgcca catcaatggt cacattcggg cgagcttcgt
    14461 aaatggttaa aatcaccccg agcggcacac gctggcgttc gattttcaaa ccgctgtcta
    14521 acacgccacc gtccatcacc tgccccaccg gatccgctaa tttggcaaca tttcgcacat
    14581 cgttagcaat gtcttttagc cgatcttcat tcaataataa gcggtcaata atcgccaatg
    14641 aaatcccttg tgcttgagca aattcaatat ctttggcatt agcgtataaa atttcttctg
    14701 cacgttgctc aaggctatcg gcaatcgtga gtaaggcttg gtttttctgt aggttgccaa
    14761 attgagccag ctcaaaacta gcttgtttgg cttgctgggc aagttctatc atctgcataa
    14821 attaggtctc atttaatcaa tattctccat aatctaacac gttcttttat gtgaagaaat
    14881 atgcaaaagc caagaaaatt ggataaaatg ggggaatttt aaaacattac gcaattcccc
    14941 tctccctgat ttttctcctg aacggagaaa aatctatccc tctcctacaa ggggagaggg
    15001 tagaatttaa ctctctcccc ttgtgggaga gagaccgcct acagattcgt tcagaatctg
    15061 taggcagaga gaggggtaaa aacagataaa acttaaacaa aatgataaac actaccccta
    15121 aacagctaat ccacattctt ccgcctcaac tggcaaacca aattgctgcc ggcgaggtgg
    15181 tggaacgccc tgcgtctgtg gtaaaggagc tagtggaaaa cagtttagat gccggagcca
    15241 atactattca aatcgacatt gaaaaaggcg gctctcagct tatccgcatt cgagataacg
    15301 gttgtggtat cagcaagcaa gatttaccgc tggcacttgc tcgccacgct acgagcaaaa
    15361 tcagcagctt ggaagattta gaagccattt taagtttagg ctttcggggc gaagcattgg
    15421 caagtatcag ctcggtttca cgtttaacac tgacctctcg taccgcagag caaaccgaag
    15481 catggcaagc ctatgcacaa gggcgggaaa tggcggtgga aattcagcct gcctcacacc
    15541 cgattggcac aaccattgaa gtagcaaatc tgttttttaa cacaccggca cggcgtaaat
    15601 ttctacgcac cgataaaacc gaatttgccc atattgacga ggtggttcgc cgcattgccc
    15661 ttgccaagcc gaatatcagt ttcagcttaa gccataatgg taaaatcgtc cgccaatatc
    15721 gcaaagtgca agacaattcg gtagagcagc aacaaaaacg ggttgcagcc atttgcggtg
    15781 atgagtttat tcaacattca acttatattg acaggcaaca cggggatctg cacctacacg
    15841 gctgggttgg ctcaccggct cttgcccgtc tgcaaaacga cctttgctac agctatgtga
    15901 acgggcgaat gatgcgggat aaaaccatca atcacgccat tcgccaagcc tacggcgaca
    15961 gcattgcaag tggttactat ccggcttttg tgatcttttt ggatttagat ccgacaatgg
    16021 ttgatgtaaa cgttcacccg gctaaacacg aggtgcgctt tcatcaagga agactggtac
    16081 acgactttat tttgcaaggc gtactcaaca gcctgcaaca aacccaacct acgcttgaac
    16141 tgcgaaatga agtgaacgag ccgttaccga gctatgttca agacactaac cgccaagctg
    16201 cggggcaaaa tatttttgtg tcgcaaaccg ctccacaagc ggccgaattt acgcaaaaaa
    16261 atgcaagtcg atcaagctat acgcctaaat ttgaacgaag caacagtgtg agttcgtccg
    16321 ctcaaaaatg gtataaggaa ttggttggtg gcgatttgca ccaaacaacg ccaactatca
    16381 aaacgcaaag cacgcttgtt gagccaaaaa cagaacccca aactgaacat aaaacagaag
    16441 ccgtttcgca aaaaattacg caaattgcac cgcttgcaag ccaccattca caagccttag
    16501 cgattgtaaa aaaccaagcg gtgttaatta aagaagagga aaatttttac ctgcttccac
    16561 tggcaacatt agccgagctt aaactcaagc tacaactgga aaaagggcaa tctcaagcgt
    16621 tgttgatccc actgaatctc agtttagatc aacaacaaac cgaacgctgg caacaaacca
    16681 aagaagaact aactaagctt ggcttttcga tcagcgaaaa acagtggcaa gcccaaacac
    16741 ggctcacagt gctttccgta ccacaggctg tcagagaaca aaacctgcaa cagcttttat
    16801 ttgctctgtt caaccaaaca caagcggtca atttagccga attttttgca aaaaaatgcg
    16861 aaaaacccac cgcttgtacg ctaagtgacg tgattgctct actctcagaa attgagcttt
    16921 atgccaatgg gaaaaaagag ctggagggaa taaggaagga agtggatttt tccaagtttt
    16981 tatagtctaa agggcaatac cctttagcca aataaatgag agtggctgcc aattcgcagc
    17041 agctctagct tatcatcttc cacttttcga tagataagaa ccaaatcagg ttggatatgg
    17101 caatccctaa agcctttcca ttcgccggtt aaagcgtgat cgcagtattt ctcaggtaat
    17161 ggcttgtcat taatcagaaa atacaacgcc tcaattaatg aagaggataa agactcaacc
    17221 gcacattttt tatagtcacg tttaaaagca ttactatact caatctctcg cattgagttg
    17281 ctccattaaa tccgcaatac tatttgctga atgtagcttt tcctcgccat tcttaacagc
    17341 ccttaatact tctgctgtct caaaattagg ctgataatca aactgaaaac gtttttctgt
    17401 tgcgattttc gctaatgtca ttcgcatcac atcagagaca gtcaagccga taccggctaa
    17461 cacctcactt gcttgctctt taatttcagg gctgattctt acgcttacta atgcactatt
    17521 tgccatcaaa aactcctttt gtatatcaaa tgatatacaa aataacattt aacaaaaaat
    17581 tgtgcaataa aaaagaaatt caaagaaaag aaatgaatag ttaaaattag ctcgttacaa
    17641 gaaatcattg agttactcaa gaaatcaagg taatataaag aagtctgggc ggaacacgaa
    17701 cccgccccta gcatctagcc gcttacaaga acagatagat tagttgaaag agcgtgaaaa
    17761 tttcaactgc tgcacacaga aacccaagtg caactaaaat caatagtagt tctttcattg
    17821 taagcctcct tagtgctact aaggatgatt taggctcagg ctactgcgaa tagccctaac
    17881 gagcctacca gtagcacaat caggattgta acaaaaaagc tgtgaatttc acggcttttt
    17941 ttgtatctat atacagtata ttaatatgaa taaaaaaccc cttgcccttt ttttaatggg
    18001 gccgactgcc tccgggaaaa ccgatttagc tattgcttta cgccaagaat tgccggttga
    18061 ggtaatcagt gttgattctg ccttaattta caaaggaatg gatattggca cggcaaagcc
    18121 aagcaaggaa gagcttgccc ttgcaccgca tcgcttgatt gatattttag accctgccga
    18181 gagctattcg gcgatgaatt tccacgctga tgcgttgcgt gaaatggcag atattacctc
    18241 acagggtaaa attccgctct tggtgggtgg cacaatgctt tattacaagg cattgcttga
    18301 agggttatct cccctgccct ctgccgatcc agccattcgg gctgaaatcg aaagccgagc
    18361 ggcacaacac ggctgggcaa cattgcatca agaattagtg aaaatcgacc cgattgccgg
    18421 tgcaagaatt aacccaaatg acagccaacg gatcaaccga gcgttagaag ttttttacat
    18481 taccggcaaa acgatgaccg aactcactgc tcagcaaggt gaggctctac cttataatat
    18541 cttacaattt gcaatcgctc ctcaagatcg tgcagttcta caccaacgga ttgaacaacg
    18601 ctttcacaaa atgattgagc taggctttga agaggaggtc aagcggttat ttttacgcaa
    18661 agatttgcat attaatttgc cctcgattcg ctgtgtgggc taccgccaaa tgtgggaata
    18721 tttgcaaggc gatatttcgc tcgatgaggc gatctttaaa ggcatttgtg ccacccgcca
    18781 gctggcaaaa cggcagatta cttggctgcg tggctggcaa ggcgaactga cttggttaga
    18841 tagtttagct ccgaccagtt ctaaagcaaa aatggtggaa aagatcgatc attatttaaa
    18901 gaattgtgat aatatctaaa cgcctttggc acttatcgca ttatttggtg tcttaaaaat
    18961 cacacaacta taaaaaggaa aataacaatg gcaaaaggtc aatctttaca agatccatat
    19021 ttgaatgcac ttcgtcgtga gcgtattcct gtttcaattt atttagttaa cggcattaaa
    19081 ttacaaggtc agatcgagtc gttcgaccaa tttgtgattt tattaaaaaa cactgtaagc
    19141 caaatggtgt ataaacacgc tatttcaacg gttgttcctg cccgtgcgtt atcgcataac
    19201 aataacaacc aagcccaaca cgctcagcct gctgccgaag taactgaaca agcggaataa
    19261 taacattatt actcaaccaa tgttaaacga atcattgcca aactcagaag aaaattctgc
    19321 gtttggcttt gctttatctg aagcaagcca aactacagaa gccgcctcgc ctaccgatcc
    19381 agaaaatcaa gataaagcca ttttggtgca tctctatctc gggcaacata aagatgttga
    19441 aaatttgctg gaatttaaaa cgctggcaga atctgccggt gtcgaagtgc tggcaacgct
    19501 taccaccagc cgccaaagtt cgcatatcaa atattatgtg gggcaaggca aagcggaggg
    19561 aattgccgaa gcggtagaac gactcggggc aacagtagtg ctggtgaacc atcaacttag
    19621 cccggctcag acccgtaatt tgcaatcgtt atgcggctgc cgtgtggtgg atagaaccgg
    19681 cttgattttg gatattttcg ctcaacgggc aagatcgcac gaaggcaaac tacaagtcga
    19741 gctggcacaa cttcgccatt tatcgacccg tttggttcgc cgagttacta atcaagacca
    19801 acaaaaaggc ggagcagttg gcttgcgtgg tccaggtgaa acacagctcg aaaccgatcg
    19861 ccgtttgatt aaagtgcgaa tccaacagtt actcaaccgc ttggaaaaag tcagcaagca
    19921 acgcaatcaa aatcgaaaaa ccagacaaaa agccgatatt ccaacagtat ccttagtggg
    19981 ctataccaat gccggcaaat ctaccctgtt taatgcgatt acccaagctg gtgtttatgc
    20041 tgccgatcaa ctttttgcga cccttgaccc gactttacgc cggattcagg tgcaagatgt
    20101 cggcacgaca attcttgccg atacggtagg ttttatccgt tttctaccgc acgatttagt
    20161 ttcagccttt aaatctaccc tgcaagaaac caccgaagct actttactgc tccacgtcat
    20221 tgacggctca gacgaacgca aaaacgaaaa tattgatgcg gtaaatcaag tgttggacga
    20281 aatcggagcg ttagatattc ctactttatt ggtattcaat aaaattgata aattagaagg
    20341 tgtagaaccg catattgaac gcaatgccga tggcacgcca gttgccgtgt atctttccgc
    20401 ccaagaaaat agcggcattg agctgttatt ccaagccatt caagaaaggc ttcgcagtaa
    20461 cttagtgtgt gaaaacttgc tcctcccggt tactgccggt gcaatttacg cacaatttaa
    20521 agcagaaaac tgcattaaaa ccgagcattt taatgagttc ggtgaacgga ttatctctat
    20581 tgaaattaac gaagtgcaat ggaacaaatg ggtgaaacaa tttccggatc tagccgaata
    20641 tattgagctg gcaaaatggg ggtaattaat ctcacttctg agtaagttat atttaaatta
    20701 tgcaagcggt caattcttta cgtttttttg caaaaaagtg taaagaattg accgcttgtt
    20761 ttatccatta aatccaattt agccaataaa aaaatccctc aaataaacca gatttccccg
    20821 ttctatttga aggattttat ttattcttcc ccaaaagtgg ggaagaaaag cttaatcaag
    20881 cagttactac cactgataac ctacgcttgc agcagcacct gtatcaccac ggctgttaga
    20941 gttaacactg aatttgatac ccactttacc attatctgat aaacgagaat aacctacagc
    21001 aatagctcct tgaccacggt aagcacctac accggctgaa accatcgatt taccaggttg
    21061 tgttacgtga tataaattac ctgcggctaa tgcacctgca atacctgcac gtaagtcttt
    21121 atctacgtta ctgatacgat tgttcagacg attttctgca cctttcaact gattcacatt
    21181 aacagcatca gtgcctttca cacccggagc aacgttcgta atacgtgttt gcgcattctt
    21241 gctacctgca atgttaagct catttacgcc atcttttgca acagttgaac tgatagttgt
    21301 accaccaact ttcactgaat caaattcaag attgcttgag gttgccactt caacagttga
    21361 acctttacgt gaaacaacga tgtttttgcc acctgaaacg gccactttac cattgttatt
    21421 aacacgttga gcacctttct ctgaagtttc agctacatta ccatcaacag tgagatacca
    21481 gcctgtattc tgcattgcat tatacaactg gctaccgctc acaacatctt tacttgttgc
    21541 cgttacatca ccatctttaa cgttagtgat cttcgtgcct ttcgcatcaa taccgccttt
    21601 agttacactt gggccgtctt taatggttaa accattgtta tttacggttg tgtcgccagt
    21661 tgttacagaa ccatcttccg ttaaatcaat tgctttcgct aattgtacct ctaatgtgtc
    21721 tgtaccattc gctttcacat tgatgttgcc tgatgctgac ttaaagtttt cagaagctgt
    21781 tttatccaca ccttcacctt tcactttaac ttcagtattc agtttctgac ggttcttcac
    21841 atcttcattg ttaccagaga agattaaacc atcatttaag gttgcaactt gttctgtgac
    21901 agttttaccg tctttatctt tggtctcata aacgatacga gtcttaccgt tctcacccgg
    21961 taatccatct ttaccatttg taccatcaac accttcagca ccatctttca ctgcaatatt
    22021 tgcacttgca ccatctttac cgtcagcgcc tttcggaccg gttaagccga tagagccatc
    22081 tttaccgttt aatacaacag aagcgccatc tttacctgta gctccaattg aaccatcaac
    22141 accgtcttta ccgtcacggc ctgcagtaat tgtgccgtca cctttaatgg ttacgccatc
    22201 tttaccgtct ttgccagcaa taccgatttg accgtcttta ccatctttac caccaatggt
    22261 taagttgttt ttcaagccga aggtcacgtt attaccttct ttagtaataa taatgttacc
    22321 gtctttgttg tttagatcaa ctgttgctcc tggtttaacg ttgcctttgt ctttaccatt
    22381 tgctgttaag ttccaacctg cgttagcaac ttcttgcact tgatataact ggctaccatt
    22441 taccgcatct ttgctggttg cagaaatttc accgtcttga acgttaatga ttttcttatc
    22501 gcctgcattg ataccggctt tagttacact tgggccatct ttgatagtta aaccatcatt
    22561 atttaccgta gtatcaccaa tagttacaga accatctttc gttaaatcaa tgtctttcgc
    22621 taatttaact gttaacgcac cattgttgtt tacaacaccg atattgttat cggacaggtt
    22681 cgttaaatca gtatcaccgc ctgagatttt taacgtctca ttaagtttct taacgatttc
    22741 tttaccgtca tcacctacga atcttaagcc atcgttcagt gttgcaactt cctcagttgt
    22801 accgtctggt ttctcataaa cgatacgggt tttgctttcg ccatctttac cgtcgttacc
    22861 gtcaaggcct ttagcaccgt cttttacaga gatagttgca cttgcaccat ctttaccgtc
    22921 agcgcctttc ggaccggtta agccgataga gccatcttta ccgtttaaag taacaccaac
    22981 tgtaccatct gcacctttaa caccgattga accatcttta cctggaccgc caatggtaaa
    23041 atcgttattt aacgtaaagt caatcacatt atcacttact gttgtgatga tgtttttgtc
    23101 tttagaggtg tacttaacag tttcacctag tttaacgtga tcagtttcac cattatccgc
    23161 tgcaatgcta aagcctttct cgataatatc gttgcttgca tttacaacat cattaatatt
    23221 cgcagcgtta gtaccaactt cttttaattg atcgtctgtt aagtcgttca ctgaagtgat
    23281 tggcttacca tctttaccgt taatgccgtc tttacctgct aaaccgtcaa taccgctctt
    23341 cacgttaaca atttggttgc cgccattgtc tagaccgtct tcagtaagct taactgcttt
    23401 accatctgtg ccatcttttg gcgtgatagt tacgccatta ttatttacta ctgttgttgg
    23461 acctttacct tcttgaccat tctctccatc ttgtggtttg aatgtagctg agttcaagtc
    23521 tttaagatct ttagctaatt gaacagataa tttaccatct ttgctgttta cgccgatgtt
    23581 atttgcagtt agcttatctt tatcagctcc accaatgatt tctaaggttt cattcaattt
    23641 cttagatact agtgttgcat catcaccttt aaagtgtaaa ccatcattta aagtagctac
    23701 ttgctctggt tcacctatag gatcaccatt gccatctgtt ggctgatatt ggatacgagt
    23761 tacaccatct ttacctggta aaccatcttt accaacaagc cctggtttgc cctcagtacc
    23821 tttaatggtt aaaccatctt taccatttgt accgttcaag ccgattgaac catctttacc
    23881 gttaagaaca actgcagaac cgtctttacc gtttacaccg atagtaccat caataccatc
    23941 tttgccaggg cgacctacag tgatagctcc atctttacca tctaaagcaa tagcatcttt
    24001 accgtcttta ccagcaatac caactttacc tggttcacca tctttaccaa cagtaatatt
    24061 attcactagg ctaacttcta atgcatggcc accatctttc tcaacaacgt ttgttttaac
    24121 attgccatca ccaatgatct tagctgtcgt acctaagttt tgcttaaact ccttgttgtt
    24181 ctcatctttt agaccaaacg catctgttgt cacctcagta acagtctcag taacagtatt
    24241 tttcaagtca ccgacgttaa ccgcattgtt aagaacatca cctgctgcct cagtaagttt
    24301 aacaggttga ccatctttac cttttaagcc gctatcaaca ttggtgattt ggttaccacc
    24361 gttgcttaag ccatcctctg ttaaggtaac attagattta gttgcatcat taggatcttt
    24421 cttagcaatc gttacaccat ctttattgat aactgtagaa tcaccttgtg tgccgaatgt
    24481 tgcactatct aagcctgcta gatcttttgc taacgccaca gtaatggtat tgccaacaac
    24541 ctgtgtcatg atatttttac cagcatcaaa cttagcccaa tcagtgtttg ttgtagcacc
    24601 tttaatatcc acctgcgtat ttaatttcgc atcgtgaact ttgccatcat tcgcaccgaa
    24661 ttttaagcca tcgttaagtg ttgcaacttc ttctttatca ccatttggtt tttcgtaaac
    24721 aatacgagtt ttgctttcgc cgtctttacc gtcgttgccg tcaagacctt tagcaccttt
    24781 ctcaacttta attgatgctt taccatcttt tccatctttt ccatttacgc catcaacgcc
    24841 gtggaatacg atggcttctg gtttaattgt tacaccatct ttaccatcag cacctttaac
    24901 accaactgaa ccatctttac ctggtttacc accaacagag atgttatcgg ataagccaaa
    24961 atcgatggta ttatttgtta cggttgtaac aacattctta tcggttgagg tgtacttaac
    25021 agtttcacct aacttcacat tgtcttcttt agcaccacct cctaagccag agtgatccgc
    25081 tgtaatgtta aagccagttt taactaaagt gtcagctact gcgtaaagtt gtgaaccgtt
    25141 aatcgcatct gttgaattgg aagcaatttt acccggtgca acaaacttaa tttggcgagc
    25201 attggttgca ttacccacac tcacataatc accatcaaca acattttcat cgccagcaaa
    25261 gctgctatat tttaatgtgc caacagttgc agtatcttct ttagttgcgg ttgcttcagt
    25321 agagtcagaa cctagaatta cagaaccctt tgtcttaaca gtaacattag aacctaatac
    25381 gaaagtatct ttacctgaaa ctgtattgtt ataacctaaa gccgcagcac gaatacccga
    25441 aacagtacta tttacaccgg ctgcaattga gtttttaccc tttgcggttg agttgtaagc
    25501 aatagcagtt gcataattac cttttgattt ggcctcaaaa ccaattgctg tgccaccttc
    25561 atgcgtaata ttggcacgtg tacctactgc tgtcgcattc gccttactta cattagcact
    25621 ataacctatc gcaacagaat tattaccact tgaattagcc gtatcaccaa ttgccattgc
    25681 accatctttg ctcgcgttag aatgcgaacc aatactgatc actttttctg catgagagtt
    25741 tgcattccaa ccaatgctaa tagcattact tttccaggct ttagaagcat taccaaaagc
    25801 aatcgcaccg attcctgttg tattcgaatt tacaccaaag gcgatagaac catcacctgt
    25861 tgcacttgca tttgttgaaa acgccaaagt atcattcgaa tttgcacgag tattcgtacc
    25921 caaagcaaat gcattatttg ctactttcgc tgtatcagga ttaattacct gtcctaattc
    25981 agaaatattt gaattctcta atttaaagcc accggaccaa gcgttagtac caatggcaaa
    26041 tgaatggtta ccattagttt tcgctttagt accgattgag aatgcatctg ttccaaatgc
    26101 taaagtatta ttttgcccat cataaattga acgtctattt tcatgaccgt aacttccatc
    26161 cactgtctgt ggagtaccac taccaatcgc aaaagaacgg tcacctagcg ctgtagccga
    26221 agcaccaatg gcgaagctag ctgtagcatt tgcccaagat gttgaaccaa ttgcagtaga
    26281 ataatctgca attgcagcag attgacgcat tgcagcaaat gagttaaatc cttccgcacg
    26341 tgcagaggta cctaatgcta cagaaccaat acttgcagta cgagaaaaag aaccaattgc
    26401 aatagacaat ccccctccag aatatgaata atcaccaatg gctatgcctg acgctttcgg
    26461 ttttcctcta ctttttctgt tattgtctaa agctacagca ttgtgtccaa ttacaattgc
    26521 tgaggtagta ttagacttat acaataatct agaatccttc tccttattaa cagagttatt
    26581 agattcttga agcttagttc tgtctgcata ggataagcta cctgggttaa agtagttata
    26641 tggattcgta atagaatctg tagccaaact agtgtttgta taaatatcta taccaccatt
    26701 aacaactttt tttggtgctt tttgttgtac ttctattcta tcaataatca ccgccgcttc
    26761 tgccggtgta gcagaaagca taaaggctgc cattccactg ataagggttg ctccccctag
    26821 aatgctagcc gctgctaatt taatagtacc gcgcttatca gtagaagaag cggctttacc
    26881 ttgcgatcga gcaagttcag acacaacttc cattttttgc gtcgtttggt taaaaataac
    26941 cttaaatatt ttgttcataa ttttatacct ttagaattat tataaagctt acttcgtaaa
    27001 taattcggca attacaaccc accgaataaa caaccttact actcttaatt tagtaagagg
    27061 aaagtcatat cgataatagt aagattttca cttcaaaagt gaaacaagct tttcacttct
    27121 ttacaattct cttattatca agataataaa attaacaaaa cc
//
LOCUS       DANMCL010000028        26838 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.028, whole genome shotgun sequence.
ACCESSION   DANMCL010000028 DANMCL010000000
VERSION     DANMCL010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 26838)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26838)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26838
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.028"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            49..1041
                     /locus_tag="PXF40_001073"
     CDS             49..1041
                     /locus_tag="PXF40_001073"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HDL5802426.1"
                     /translation="MKKSFILQQQEISFVKNTFTQYLIDKLGIIEVQGPILSEVGNGM
                     QDNLSGIEKAVKVNVKCIPSATYEVVHSLAKWKRHTLARFGFKEGEGLFVHMKALRPD
                     EDSLDRTHSVYVDQWDWEKVIPEGRRNFDFLKETVNEIYKAIRLTELAVEARFDIPSV
                     LPKQITFVHSEDLVQRYPNMTSKERENAICKECGAVFLIGIGGKLSDGKPHDGRAPDY
                     DDWTTESEQGYKGLNGDILVWNEELGTAFELSSMGIRVDETALRLQVALTGDEDRLEM
                     DWHKDLLAGRLPLSIGGGIGQSRLVMFLLRKKHIGEVQSSVWPKAVFEEFENIL"
     gene            complement(1165..1584)
                     /gene="atpC"
                     /locus_tag="PXF40_001074"
     CDS             complement(1165..1584)
                     /gene="atpC"
                     /locus_tag="PXF40_001074"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HDL5802427.1"
                     /translation="MASQFELTVVSAERKIFEGTVTSVRVSGTDGELGVYAGHAPLLT
                     AIKPGMVKFTLADGKEEFIYVSGGFLEVQPTVVTVLADTAIRGEELDEQRILAAKRKV
                     EETLSKTSDADMTAKLAREIAKLRVYELTKTKLANKR"
     gene            complement(1612..2985)
                     /gene="atpD"
                     /locus_tag="PXF40_001075"
     CDS             complement(1612..2985)
                     /gene="atpD"
                     /locus_tag="PXF40_001075"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011978979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HDL5802428.1"
                     /translation="MATGKIVQIIGAVIDVEFPQDAVPKVYDALKVESGLTLEVQQQL
                     GGGVVRCIALGSSDGLKRGLKVENTNKAIEVPVGTKTLGRIMNVLGEPIDEAGPIGEE
                     ERWTIHRAAPSYEEQANSTELLETGIKVIDLVAPFAKGGKVGLFGGAGVGKTVNMMEL
                     IRNIAIEHSGYSVFAGVGERTREGNDFYHEMKDSNVLDKVSLVYGQMNEPPGNRLRVA
                     LTGLTMAEKFRDEGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVL
                     QERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDSTVVLSRNIASLGIYPAVDP
                     LDSTSRQLDPLVVGEEHYNVARGVQGTLQRYKELKDIIAILGMDELSEDDKRLVARAR
                     KIERFLSQPFHVAEVFNGVPGKFVPLKETIRGFKGILEGEYDHIPEQAFYMAGSIDEV
                     VERAKQM"
     gene            complement(3006..3872)
                     /gene="atpG"
                     /locus_tag="PXF40_001076"
     CDS             complement(3006..3872)
                     /gene="atpG"
                     /locus_tag="PXF40_001076"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HDL5802429.1"
                     /translation="MAGAKEIRTKIASVRNTQKITKAMEMVAASKMRKTQERMAASRP
                     YAESIRKAISHIAKGNIEYKHPFLTPRPVKKVGYLVVSTDRGLCGGLNINLFKTVLHE
                     LKEKDDQGVKSRLAVVGNKGISFFNPMGLEIKGHINGLGDTPAMEDLVGIVNGMVNAY
                     REGEIDEVYVVYNRFINTMSQKPTVQQLLPLPALENDSLEQTGSWDYLYEPNPQALLD
                     SLLVRYLESQVYQAVVDNLASEQAARMVAMKAATDNAGNLINELQLVYNKARQASITN
                     ELNEIVAGAAAI"
     gene            complement(3898..5439)
                     /gene="atpA"
                     /locus_tag="PXF40_001077"
     CDS             complement(3898..5439)
                     /gene="atpA"
                     /locus_tag="PXF40_001077"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HDL5802430.1"
                     /translation="MQLNSTEISELIKKRIAQFNVVSEAQSTGTIVSVSDGVIRIHGL
                     SDVMQGEMIALPGNRYAIALNLERDSVGAVVMGPYADLAEGMQVQCTGRILEVPVGRG
                     LLGRVVNTLGQPIDGKGEIQNDGFSPIEVIAPGVIDRQSVDQPVQTGYKAVDSMVPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTIANVVRKLEEHGAL
                     ANTIVVVASASESAALQYLAPYAGCAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERASRVNADYVERFTNGAVKGQTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLESGLFNAGIRPAVNPGISVSRVGGSAQTKLVKKLAGG
                     IRTALAQYRELAAFAQFASDLDEATRKQLSHGQKVTELLKQKQFEPMSVAQLGLSLAA
                     AEYGYLDDIPVERVGSFEANLLAYAQSNYGEFMQELSKSGNFNDEIKDKLNEILSGFK
                     KNSAW"
     gene            complement(5452..5985)
                     /gene="atpH"
                     /locus_tag="PXF40_001078"
     CDS             complement(5452..5985)
                     /gene="atpH"
                     /locus_tag="PXF40_001078"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HDL5802431.1"
                     /translation="MSELSTVARPYAKAAFDFALEQGQLEQWQQMLTFSAAVANDEQV
                     ASFLNSSLASGQISETFIKICGEQLDQYGQNFIRVMADNKRLAVLPAVLNAFLELRAE
                     QESIKDVEVVSADKLTDAQEAKIANAMEKRLGTKVRITSSIDSSLIAGVIIRYDDVVI
                     DGSSRGQLNRLSQELSL"
     gene            complement(5999..6469)
                     /gene="atpF"
                     /locus_tag="PXF40_001079"
     CDS             complement(5999..6469)
                     /gene="atpF"
                     /locus_tag="PXF40_001079"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HDL5802432.1"
                     /translation="MNLNATLIGQLIAFALFVAFCMKFVWPPLIRVIEERQANIASAL
                     ASAEKAKQEQADSKAAADQEILRAKEEAQNIIDLATKRRNEILESVQAEAEVERQRII
                     EQGYAEVESERKRVQEELRQKVAALAIAGAEKIVGRSVDAAANNDIIDKLVAEL"
     gene            complement(6530..6784)
                     /gene="atpE"
                     /locus_tag="PXF40_001080"
     CDS             complement(6530..6784)
                     /gene="atpE"
                     /locus_tag="PXF40_001080"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HDL5802433.1"
                     /translation="MESVITATIIGASILLAFAALGTAIGFAILGGKFLESSARQPEL
                     ASSLQTKMFIVAGLLDAIAMIAVGISLLFIFANPFIDLLK"
     gene            complement(6902..7690)
                     /gene="atpB"
                     /locus_tag="PXF40_001081"
     CDS             complement(6902..7690)
                     /gene="atpB"
                     /locus_tag="PXF40_001081"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HDL5802434.1"
                     /translation="MAGTTAEYISHHLSFLSTGEGFWAVHLDTLFFSLVAGAIFLWVF
                     SRVAKNATTGVPGKLQCFVEIVIEWVNGLVKDNFHGPRNVIAPLALTIFCWVFIMNAI
                     DLIPVDFLPQLANLFGIHYLRAVPTADISATLGMSICVFALILFYTVKSKGFGGLVKE
                     YTLHPFNHWAFIPVNFILETVTLLAKPISLAFRLFGNMYAGELIFILIAVMYMADNFA
                     LQALGIPLHLVWAIFHILVITLQAFIFMMLTIVYLSIAYNKADH"
     gene            complement(7713..8096)
                     /locus_tag="PXF40_001082"
     CDS             complement(7713..8096)
                     /locus_tag="PXF40_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HDL5802435.1"
                     /translation="MSAVINRAKSQYKQALKVEFFLLCVFALGVSLWKMNFNFSFLGG
                     ALASFLPHLVFVYWVFFKKSAKNQSKMTAFYRGEGMKWLVTIILVIGCFKLIPALDVV
                     LFFVGYFIALFLNNMIPFVLSKHHH"
     gene            8564..9697
                     /gene="carA"
                     /locus_tag="PXF40_001083"
     CDS             8564..9697
                     /gene="carA"
                     /locus_tag="PXF40_001083"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HDL5802436.1"
                     /translation="MFKPAILVLTDGSVFSGKSIGADGHTIGEVVFNTAMTGYQEILT
                     DPSYTKQIVTLTYPHIGNTGINLEDKESPNVCASGLIIRDLPLLHSNFRASSSLSDYL
                     IQQNIVAIADIDTRRLTRILREKGAQAGCILVGDATEENIANALAFANSFGSMAGKDL
                     AQSVTCNELYKWTDGEWQLGKGYVPQQQTEFHVVAYDYGVKHNILRMLAERGCRLTVV
                     PAKTSAEAVLALNPDGIFLSNGPGDPEPCDYAITAIRKLLETQKPIFGICLGHQLLGL
                     AAGGKTKKMVFGHHGANHPVQDLDSQKVLITSQNHGFEVDESSLPSNVRVTHRSLFDG
                     TVQGIELTDRPAFSFQGHPEASPGPNDVAYLFDRFVSEMKKVK"
     gene            9800..13006
                     /gene="carB"
                     /locus_tag="PXF40_001084"
     CDS             9800..13006
                     /gene="carB"
                     /locus_tag="PXF40_001084"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HDL5802437.1"
                     /translation="MPKRTDINTILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     VLVNSNPATIMTDPNMADVTYIEPIEWKTVEKIIEKERPDAILPTMGGQTALNCALDL
                     SKNGVLKKYNVELIGATEDAIDKAEDRGRFKEAMTKIGLNTPKSFVCHSFEEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNRDEFIAICERGFEASPTHELLIEQSVLGWKEYEM
                     EVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAINPANGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLNE
                     LRNDITGGLIPASFEPTLDYVVTKIPRFAFEKFANADDRLTTQMKSVGEVMAMGRTFQ
                     ESLQKALRGLETGICGFNLLSEEPEKIRRELANPGPNRILYVADAFGAGFSLEEVHHY
                     SKIDPWFLVQIQDLVLEELALEKKQFSDLDANEIRRLKRKGFSDKRIAQLTKVSEKMV
                     RDYRHTYAILPVYKRVDTCAAEFASDTAYLYSTYEEECEAKPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHASLALREAGYETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RVENPWGVIVHYGGQTPLKLANALSDAGVNIIGTSADSIDAAEDRERFQQILNTLGLK
                     QPANRTARNALEAVALANEVGYPLVVRPSYVLGGRAMQIVYNDEELNRYMREAVSVSN
                     DSPILLDHFLNNAIEVDVDCICDGENVLIGGIMQHVEQAGIHSGDSACSLPAYSLSGH
                     VLDEIRKQTNAMAFALGVKGLMNVQFAVQNEVVYVLEVNPRASRTVPFVSKATGRPLA
                     KIAARVMAGETLADLNALEEIIPSKFFVKEAVFPFIKFPGVDTILGPEMRSTGEVMGI
                     GNTFAEAFFKAQLGAGERIPKVGKVFMSVIEEHKPALIYIAKRFQEQGYGLCATFGTA
                     NFLRQHGIAVQTVNKVREGRPHIVDAIKNGEIALVINTVSGEPEVIADSHSIRRTALQ
                     QRVPIYTTLAGADAISYGVKHINEFDVYSVQELEQKAN"
     gene            complement(13081..13872)
                     /locus_tag="PXF40_001085"
                     /pseudo
     CDS             complement(13081..13872)
                     /locus_tag="PXF40_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072249.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
     gene            14075..15073
                     /gene="yiaK"
                     /locus_tag="PXF40_001086"
     CDS             14075..15073
                     /gene="yiaK"
                     /locus_tag="PXF40_001086"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HDL5802438.1"
                     /translation="MRVSYEELKAQFKRVLLARNVREEIAEECATVFADTTQAGAYSH
                     GVNRFPRFIQQLENGDIVPEAVPTKVLSLGAIEQWDAHQAIGNLTAKKMMDRAMELAS
                     ENGIGVVALRNANHWMRGGSYGWQAAEKGYIGICWTNALAVMPPWGAKECRIGTNPLI
                     IAVPTNPITMVDMSCSMYSYGMLEVHRLAGRQTFVDAGFDDDGNPTRDPATVEKNLRL
                     MPMGFWKGSGLSIVLDMIATLLSNGESTAAVTEDKDDEYCVSQVYIAIEVDRLIDGKT
                     KDEKLNRIMEYVKTAERADPDVAVRLPGHEFTQILADNKANGIPVDDTVWAKLQAL"
     gene            15198..15563
                     /locus_tag="PXF40_001087"
     CDS             15198..15563
                     /locus_tag="PXF40_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhcH/YjgK/YiaL family protein"
                     /protein_id="HDL5802439.1"
                     /translation="MFFGHISQVKANRYPPAIQIALNYLKNTDFDAMEAGVYELKGRQ
                     IYVQVLDLNTKSKHEFQPEVHRNYLDVQYLHRGKEIMAAAVDTGTNPIAMEYNPERDI
                     QYYQSVANENEFRCVEGNF"
     gene            15627..16106
                     /locus_tag="PXF40_001088"
     CDS             15627..16106
                     /locus_tag="PXF40_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter small permease"
                     /protein_id="HDL5802440.1"
                     /translation="MKALAQLVGKLLEILVVVILSAMSILVFVNVVLRYGFNSSISVT
                     EEVSRYMFVWLAFLGAVLAFSENQHVKVTMLTDKLSPTARNILSVVTDLAMLFCCYLI
                     VDGSWIQFNLNLNNFAPISGLPQGITFLASTVAGVLIGLLIIARIVATVGVIAKGEK"
     gene            16107..17384
                     /locus_tag="PXF40_001089"
     CDS             16107..17384
                     /locus_tag="PXF40_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017806296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HDL5802441.1"
                     /translation="MTVVIFLSVLLGSILLGIPVAFALLVCGVALMLHLDLFDAQILA
                     QQIVSGADSFSLMAIPFFILAGEIMNEGGLSKRIIDLPMKLVGHKRGGLGFVAILAAM
                     IMASLSGSAVADTAAVVAMLLPMMKTTGYPIDRSAGLIGTAGIIAPIIPPSIPFIVFG
                     VASGVSITKLFLAGIFPGIMMGICLAALWWWQAKRLDLMTFSKATKEELCISFKNSIW
                     ALLLPVIIIGGFRSGMFTPTEAGAVATFYALIVSLFVYREMKFKDLYKVVLAAAKTTA
                     VVMFLVAAANVTGWLITVAELPMMLTELLEPLIESPTTLLLVIMLAVFIIGMVMDLTP
                     TVLILTPVLMPLVEEAGIDPVYFGVLFILNTSIGLITPPVGNVLNVITGVSKLPFDQA
                     AKGVMPYLVMMICLLLLFVFFPSLVLVPLSWMQ"
     gene            17487..18473
                     /locus_tag="PXF40_001090"
     CDS             17487..18473
                     /locus_tag="PXF40_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5802442.1"
                     /translation="MKLFNLKTLFALVAGVAVMSGSAMAETSLRFGYEAPRSDTQHIA
                     AKKFDELLAAKTKGEIKLKLFPDSTLGNAQTMISGVRGGTIDIEMSGSPNFTGLEPKL
                     NVIDIPFIFKDREHVYKVLDGEVGQGLLKDLEAQGLKGLAFWDVGFRAFSNSKHPVTK
                     PEDIKGLKVRTNQNPMYIQAFTLLGGNPVPMPLSELYTALETRAVDAQEHPIGIFWSA
                     KLFEVQKHLSLTNHGYTPLIVVMNKAKFDGLAPELQTALVEAAKEAGQFQRDLNVKNE
                     KEIIEKLRKQGIEVIEQVDNAPFKAAIEAEVRKAFVEKHGDELLKKVDALAQ"
     gene            18547..19530
                     /locus_tag="PXF40_001091"
     CDS             18547..19530
                     /locus_tag="PXF40_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HDL5802443.1"
                     /translation="MKLFNLKTLAAFVAGFALFSTAQAETSFRFAYEAPRSDTQHIAA
                     KKFNDLLQEKSQKGLKLSLFPDSTLGNAQTAISGVRGGTIDIAMSSSSNFTGLEPKLN
                     VIDIPFIFKDRDHAYKALDGEIGQGLLTALEAHGLKGLAFWEVGFRAFSNSKHPITKP
                     EDIKGLKIRTNQNPMYIQAFSILGANPVPMPLSKLYTALETKAVDAQEHPIGIFWSAK
                     LYEVQKYFSFTNHGYTPLIVAINKAKFDALPAEQQTALVEAAKEAGKYQRQLNLENEQ
                     KIIDSLKKAGIEFVDNLDTTPFKDAVSAETRKAFIEKNGDGLVKAIDALAK"
     gene            19661..21145
                     /locus_tag="PXF40_001092"
     CDS             19661..21145
                     /locus_tag="PXF40_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5802444.1"
                     /translation="MQHIIKRFGSHTAVNDVSLDIHSGEIVALLGENGAGKSTLIKIL
                     AGIYDRDEGDILFHNQKIQSAHAIEKGNKKPIAFIHQDLGLIEWMTIAENMAFVMGFP
                     RKFGLIDWAKVREQSQKALDFVGIKLSADTRVFDLSRTEKALLAIARAIAVNAEILVL
                     DEPTASLPASDVEHLFTVLNRLRSQGVGMIYVTHRLDEVIAISDRILVMRDGFPVAEG
                     QTKLYDVKGLVKAIVGEESRGRQRVDLPTDTPEILSLQNVVVGDTGPVNFRLHKGEMI
                     ALAGLRGAGQEEIGRLLFGERTLDKGEIQLDKRSYSAKDPQDAIAKGVALVAGDRTRE
                     SVFMSMTTSENLFINPVLSGHSPLKRYSRREEWGESWYKFQLFDIRPKNLFIDASALS
                     GGNQQKIVLARWMHLNTPVLILEDPTAGVDVGARAEIYDLLNKALAEGVAIIVISTDF
                     EEIAHLCNRALVFNRGEIAGELLNEEVTFANLLALASDSQSKKQ"
     gene            21340..22386
                     /locus_tag="PXF40_001093"
     CDS             21340..22386
                     /locus_tag="PXF40_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802445.1"
                     /translation="MAQTNIKSTALEQPVSIARDGFMAWFSQMSTRYGLLWLCVLLVI
                     IFSLTTESFASMLTLNAILESKSKIALLALAATTTMIVGKIDLNVGFGIVLWHILVIT
                     LQVQYGFSWYMAILIVLVIAALYGLLNGILVALADIDSFVATLGSGTVLYAVALWHSG
                     GRQIVGDLPDEFIALNSTEIFGIPISAFYVLAVAIVMWLVTEHTPTGRCMYAVGGNPT
                     AARLNGINIKKYTIVPFIVSSVITAFTGVLISAQQGVGQASVGMDYLLPALVGAFLGS
                     TTIRPGRINVWGTVVGIAILAIGISGIQQFGGAFWVEPLFNGATLLLSITIAGYAQRK
                     RLLNQKAVQKKSTN"
     gene            22399..23508
                     /locus_tag="PXF40_001094"
     CDS             22399..23508
                     /locus_tag="PXF40_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HDL5802446.1"
                     /translation="MKKAFRTTLTAIATLTAIAFGNNAFANDDPFVQEAKQLVAAATA
                     KQEKWDGPTTGPQLQKEKTVIFIASDMKNGGVLGVIDGMKEAVGVTGWKLDVLDGAGT
                     VNNQLAALNQAIARKPDAIVIGGWNPNVAKIPLQKATKNGIKLAAWHATPEPGAIDKY
                     GIFYNVTSDSDEIARLSAMLAVAESNGKAKAIILTDSLYEIALRKANVMKEVIEKCKE
                     CKVLEFIDTPLADTSSRMPNLTFSLLQKYGDDLEYALAINDLYFDFMAPSLRTAGKDK
                     PFSISAGDGSVTAYQRIRNGDKQFATVPEPLNLHGWQLVDELNRAFANEKPSGYITPA
                     HLVTKENVAFDGGENNLYAPQNGYKGAYKAIWGVK"
     gene            23613..24503
                     /locus_tag="PXF40_001095"
     CDS             23613..24503
                     /locus_tag="PXF40_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HDL5802447.1"
                     /translation="MSNKFIPKISNPRFNELVGNTFELEELFDKAIWAEGPAWSKPQQ
                     ALYFSDVKGCTMYRWTEQDGTQVFRQPSYFSNGNAFDANDNLITCEHGNRGISLTTPS
                     GEYRFLVGQLDGKRLNSPNDVVVKSDGIIWFTDPPYGILSDNEGKQSPSEIIGCYIYC
                     YDPKTDKLNIATFNTMRPNGLAFSSDEKQLFVADMSSVEFDEDGLHHLVVFDVDGNKL
                     KNRRDVAEISPGIPDGFRIKQNGVIFCSCEEGIIAILPDGTELGRFVLGKLTSNCSFG
                     DDEQTLFITCSNSVYRLTIK"
     gene            24575..26044
                     /locus_tag="PXF40_001096"
     CDS             24575..26044
                     /locus_tag="PXF40_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HDL5802448.1"
                     /translation="MDNKMNYTLGIDCGGTFIKAALFDTQGNIQALHRENVSVISEQA
                     GYAERDMSQLWAICAEVVRSTIEKSGVNPADIKAVGISAQGKGAFLLDKQNRPLGRAI
                     LSSDQRSLEIVKQWQAEGIPQQLYPITRQTLWTGHPVSILKWVQQNEPERYAQIGAVL
                     MSHDYLRFCLTGELHCEETNISESNLYNMEKGEYDQQLADLLGMPDVLEKLPPVIEPN
                     KISGYVTENAAKLTGLAVGTPIVGGLFDVVSTARCANLDDETKLNAVLGTWSVVSGIT
                     DHIDASQSLPFVYGRYAEAGKFIVHEASPTSAGNLEWFVNQWKLDYVKINQAVAQLPP
                     AASSVLFVPFLYGSNAGLGMQAGFYGMQAHHTQAHLLQAIYEGVLFSLMSHLNRMFIR
                     FPKADVLRVTGGPVKSKVWMQMLADLTGMRLEIPQMEETGCLGAALMAMQGVGLDISQ
                     VQALNNEMQVFEPNPENYAAYQTKYQRYQKLTEALNTMI"
     gene            26254..26565
                     /locus_tag="PXF40_001097"
     CDS             26254..26565
                     /locus_tag="PXF40_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HDL5802449.1"
                     /translation="MAKSLDAKREELTNEIRDILKNAEELFNETSDSSTEEYKKLKDK
                     LAKQFDDVKDRFATLKDDTVDSARTVVKQTDTLVQDNPYKAITVAGVVGLLLGVLISR
                     R"
     gene            26645..>26838
                     /locus_tag="PXF40_001098"
     CDS             26645..>26838
                     /locus_tag="PXF40_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL5802450.1"
                     /translation="MLDNIKSGFRNSLITLLEIAQVRGEMARIEINEQKNQLISVLIF
                     ILLAFVFLLVSFVSLLFGLD"
BASE COUNT         7758 a         5813 c         5840 g         7427 t
ORIGIN      
        1 aagcacgaga aataaaaaat caacattctt taattaggaa agcaaacaat gaaaaaatct
       61 tttattttac agcaacaaga aatcagtttt gttaagaaca catttactca atatttaatt
      121 gataaattag gcattattga agttcagggg cctattttga gcgaagtcgg caacggtatg
      181 caagacaacc tttccggtat cgaaaaagca gtaaaagtaa acgtaaaatg tattccaagc
      241 gctacttatg aagtggttca ttctcttgca aaatggaaac gccacacctt agctcgtttt
      301 ggatttaaag aaggagaagg gttatttgtt catatgaaag ctcttcgccc tgatgaagat
      361 tctttagatc gcacacactc ggtatatgtt gaccaatggg actgggaaaa agtcattcct
      421 gaaggtcgcc gcaacttcga tttcttaaaa gaaacggtaa acgaaatcta taaagcaatt
      481 cgtttaaccg aattagcggt ggaggctcgt ttcgatattc catctgtatt gcctaaacaa
      541 attactttcg ttcacagcga agacttagtg caacgctatc cgaatatgac cagcaaagag
      601 cgtgaaaatg ctatctgtaa agagtgcgga gcggtgttct taatcggtat cggcggcaaa
      661 ttatcagacg gtaaacctca cgatggacga gctccggact atgatgactg gacaaccgag
      721 tccgaacaag gctacaaagg cttaaacggc gatattttag tttggaacga agaactcggc
      781 acagcctttg aactttcctc aatgggtatt cgtgtagatg aaaccgcctt acgcttacaa
      841 gttgctttaa ctggcgacga agaccgcctc gaaatggatt ggcacaaaga tttattagcc
      901 ggcagactcc cgctttctat cggcggcggt atcggtcaat ctcgcttagt gatgttctta
      961 ctacgcaaaa aacacatcgg tgaggtgcaa tccagtgtct ggccaaaagc ggtatttgaa
     1021 gagtttgaga atattcttta ataaaacaaa aaagcgaacc ttagggttcg cttttgcttt
     1081 ctacaagcgg tcttattttg caaaaaattt actgttttta accgcttgta aaacaaaacc
     1141 ccactttcgt ggggtttttt gatattaacg tttattcgct aatttggttt tagtgagttc
     1201 gtaaacacgc agtttcgcaa tttctctcgc taacttcgcg gtcatatccg catcgctggt
     1261 ttttgaaagt gtttcttcta ctttgcgttt tgcggcaaga atacgctgtt cgtctagttc
     1321 ttcaccacga attgcggtat cagccaacac tgttactacg gtcggttgta cttcaaggaa
     1381 accacctgaa acgtagataa actcttcttt gccgtcagct aaagtgaatt taaccattcc
     1441 cggtttaatt gcggttaata acggtgcatg ccctgcatac acccctaatt caccatctgt
     1501 ccctgaaaca cgcacgctgg taactgtgcc ttcaaagatt ttacgttctg cactcactac
     1561 cgtgagttca aattgagatg ccatgttgtt ctcctttagt ttagaacaaa attacatctg
     1621 ttttgctctt tcaaccactt cgtcaattga acccgccata tagaacgctt gttccggaat
     1681 atggtcgtat tcgccttcta aaatgccttt aaagccacga attgtttctt ttaacggtac
     1741 gaatttgccc ggtacgccgt tgaatacttc cgcaacgtgg aatggttgtg aaaggaaacg
     1801 ttcgatttta cgcgcacgag caacaaggcg tttgtcgtct tccgataatt catccatacc
     1861 caaaattgca atgatgtctt ttaactcttt ataacgttgt aatgtacctt gtacaccacg
     1921 agcaacgtta tagtgttcct caccaaccac gagtggatct aactgacgag aggttgagtc
     1981 aagagggtca accgccgggt aaataccgag tgaagcgata ttacggctta ataccaccgt
     2041 tgagtctaag tgggcaaagg tagttgccgg agacgggtca gttaagtcat ccgccggaac
     2101 atataccgct tgcacagagg taatagagcc ggttttggtt gaggtaatac gctcctgtaa
     2161 tacgcccatc tcttctgcaa gagtcggctg ataacctacc gcagacggca tacgacctaa
     2221 taacgcagat acttcggtac cagctaaagt ataacggtag atgttatcca cgaagaataa
     2281 tacgtcacga ccttcatcac ggaatttttc tgccatggtt aagccggtta atgccacacg
     2341 cagacggttg cccggtggtt cgttcatttg accgtaaacc agcgatactt tgtctaatac
     2401 gttagagtct ttcatttcgt ggtagaagtc attaccctca cgagtacgct cacctacacc
     2461 ggcgaatacc gagtaaccgc tatgttcgat agcgatgtta cggattaact ccatcatatt
     2521 tacggtttta cctacacccg caccaccgaa taagccaact ttaccaccct tagcaaatgg
     2581 agcaactaag tcgataactt tgataccggt ctctaaaagc tcggtgctgt tcgcttgttc
     2641 ttcgtagctt ggtgctgcac ggtggattgt ccaacgttct tcttcaccga ttgggcctgc
     2701 ttcatcaatt ggctcaccta atacgttcat aatacgaccg agtgtttttg taccaaccgg
     2761 tacttcaatc gctttattcg tattttcaac ttttaagcca cgttttaaac catcagatga
     2821 accaagtgcg atacaacgga ccacaccgcc acctaattgt tgttgaactt caagggttaa
     2881 tcctgattca acttttaatg catcataaac ttttggtact gcatcttgcg gaaactcaac
     2941 atcgattacc gcaccgatga tctgtacaat ttttcccgtt gccattaccg ttcctctatt
     3001 cattgttaaa ttgctgcggc acccgcgaca atttcattta attcattcgt aatacttgct
     3061 tgacgagctt tgttatacac taactgtaac tcattaatca gattacctgc gttatcggtt
     3121 gctgctttca ttgccaccat tcgagcagcc tgttcagacg caagattatc taccactgcc
     3181 tgataaactt gagattctaa ataacgaacc agtaagctgt ctaataacgc ttgtggattt
     3241 ggttcataga gataatccca agaaccagtt tgctctaatg agtcattttc cagtgcaggc
     3301 aaaggaagca actgttgtac tgtcggtttt tgtgacatcg tgtttataaa acggttatat
     3361 accacataca cttcatcaat ttcgccttca cggtaggcat ttaccatacc attaacaata
     3421 ccgactaaat cttccattgc cggtgtatca cccaatccat tgatatgacc tttaatctct
     3481 agccccattg ggttaaaaaa ggagatccct ttatttccca ccacagcaag tcgagactta
     3541 acaccttggt catctttttc tttcaattca tgtaaaacgg ttttaaataa attgatattt
     3601 aagccaccac ataaaccgcg atcggttgaa actactaaat agccaacttt ttttaccgga
     3661 cgtggggtca aaaatgggtg tttatactca atgttacctt tggcaatatg gctaattgcc
     3721 ttgcgaatac tttcagcata agggcgagaa gccgccatac gctcttgggt tttacgcatt
     3781 tttgatgcgg caaccatttc catcgctttg gtaatttttt gtgtattacg aacacttgca
     3841 attttggttc ttatctcttt agcacctgcc atattatttc tccgctaaaa agttagatta
     3901 ccaagcactg ttctttttga aaccagataa aatctcgttc aatttatctt taatttcatc
     3961 gttgaaattg ccggattttg acagttcttg cataaactcg ccgtagttac tttgagcata
     4021 agctaataag tttgcttcaa atgagccaac acgctcaacc ggaatatcat ctaagtaacc
     4081 gtattcagct gctgctaatg ataaacctaa ttgtgcaaca gacatcggct cgaattgttt
     4141 ttgtttcaac aattcagtta ctttttgacc gtgtgaaagc tgtttacgtg ttgcttcatc
     4201 aagatctgat gcgaactggg caaatgccgc taattcacgg tattgagcaa gtgcggtacg
     4261 gataccaccg gcaagcttct taaccagttt agtttgtgca gaaccaccta cacgggaaac
     4321 cgagataccc gggtttaccg cagggcgaat accggcattg aataagcctg attctaagaa
     4381 aatctgacca tcggtaattg aaattacgtt agtcggtacg aaggctgaaa cgtcacctgc
     4441 ttgggtttcg atgatcggta atgcggttaa agaaccggtt tgacctttca cagcaccgtt
     4501 agtgaaacgt tctacatagt ctgcatttac acgagacgca cgctctaata agcgagagtg
     4561 tagatagaac acatcacccg ggaatgcttc acgacccggt ggacggcgta ataacaatga
     4621 aatttgacgg taagcaactg cttgcttaga caaatcatcg taaacgatca acgcatcttc
     4681 accacggtca cggaagtatt cacccattgc acaacctgca taaggtgcaa gatattgtaa
     4741 tgcagcagat tcagacgcag aagccactac aacgatagtg ttcgctaatg caccgtgttc
     4801 ttctaattta cgcaccacgt tggcgatagt tgatgccttt tgaccgattg caacgtagat
     4861 acatttaatg cctgaatcac gttggttgat gatcgcatca atcgctaatg cggttttacc
     4921 ggtttgacgg tcacctataa tcaattcacg ctgaccacga ccgattggta ccattgagtc
     4981 caccgctttg taaccggttt gaaccggttg atcaaccgat tgacggtcga taacgcccgg
     5041 tgcgatcact tcgattggtg agaaaccgtc attttggatt tcgcctttac catcgattgg
     5101 ctgacctaag gtatttacaa cacgacctaa taagccacga ccaaccggca cttctaaaat
     5161 acgaccggta cattgtactt gcataccttc tgctaaatcg gcataaggtc ccattacaac
     5221 tgcaccaaca gaatctcttt ctaagtttaa tgcaatcgca taacgattgc ccggtaatgc
     5281 aatcatttca ccttgcatta catcagataa gccgtggata cgaataaccc cgtcacttac
     5341 cgaaacgatt gtccctgtgc tttgagcttc actcaccaca ttaaactggg caatacgttt
     5401 tttaatcaat tcactaattt cagttgaatt tagttgcatt ttttattcct cttacaagct
     5461 caactcttga ctcaagcggt ttagctgtcc acgactacta ccatcaatca ctacatcatc
     5521 ataacgaatg atcacacccg caattaatga actatctatt gatgaagtaa tacgtacttt
     5581 cgttccgagt cgcttttcca tcgcattggc aatttttgct tcttgtgcat ctgttaattt
     5641 atctgcagaa acaacctcaa catctttaat tgattcctgt tctgctctta attctaaaaa
     5701 tgcattcaat accgcaggta atactgctaa acgcttgtta tcagccatta cgcgaatgaa
     5761 attttgccca tattgatcta attgttcgcc acaaatcttg ataaacgtct cagaaatctg
     5821 accgcttgca agtgatgagt taagaaaact agctacttgc tcatcgttag cgacggcggc
     5881 agaaaaagtt aacatctgct gccattgttc caattgacct tgttctaaag caaaatcgaa
     5941 agccgcttta gcataggggc gagctactgt gcttaattct gacatctgcc cctcctagtt
     6001 atagttccgc aactagctta tcaataatat cgttgttcgc agcggcatcc accgaacgac
     6061 ccacgatttt ttctgcacca gcaatagcca atgcagccac tttttgacga agctcttctt
     6121 gaacgcgttt acgttcgctt tcaacttccg cgtaaccctg ttcaataata cgttgacgtt
     6181 ccacttcagc ttctgcttgt acagattcta aaatttcatt acgacgtttt gttgctaaat
     6241 caatgatatt ttgtgcttct tctttcgctc taaggatttc ttgatccgca gccgctttag
     6301 aatcagcttg ttcttgtttc gctttttcgg cagaagccaa tgcgctagca atatttgcct
     6361 gacgctcttc tatcactcga attagcggtg gccatacaaa cttcatacag aacgcaacaa
     6421 aaagtgcgaa cgcaatcagt tgaccaatta gtgttgcatt taaattcaca acgccctcct
     6481 aaaagccggt aaagttattc aactgaataa cggttaatca aatcccgact tatttcaata
     6541 aatcaatgaa cgggtttgcg aagatgaata gtaatgaaat acctacagcg atcattgcga
     6601 tagcatctaa aagaccagca acgataaaca ttttagtttg taagcttgat gctaattccg
     6661 gctgacgtgc agatgactct aagaatttgc cacctaagat agcaaagccg atagcagtac
     6721 caagagcagc gaaagctaat aaaattgaag caccaataat tgttgctgtg attactgatt
     6781 ccataatgtt ctccattaga ttgaggaatt agcccgaagg ctgggttgtt gataaaaata
     6841 catatcaagc ggtcaatatt ttgcaaaaat ttgcgaaaaa cctaccgctt gtaaggctag
     6901 tttaatgatc cgctttgtta taagcgatac tcaaataaac aatcgttagc atcataaaaa
     6961 taaaggcttg aagcgtaata actaaaatat ggaaaatcgc ccaaaccaag tgtaatggaa
     7021 tccccaacgc ctgtagagcg aagttgtctg ccatatacat tactgcaata aggataaaga
     7081 ttaactcacc tgcatacata ttaccgaata aacggaacgc caatgaaatc ggttttgcca
     7141 aaagcgttac cgtttcaaga ataaagttta ccggaatgaa tgcccagtgg ttaaacgggt
     7201 gtaacgtgta ttctttcact aaaccgccaa aacctttcga tttcaccgtg taaaataaaa
     7261 ttaacgcaaa tacacaaata gacataccca gtgttgcact aatatctgcc gttggtactg
     7321 cacgcaaata gtgaatacca aacagattgg ctaactgtgg taagaaatcg accgggataa
     7381 ggtcgatcgc attcataata aacacccaac agaaaatcgt taatgctaat ggtgcaatta
     7441 cattgcgagg tccgtggaag ttatccttca ctaaaccgtt tacccactca ataacaatct
     7501 caacaaaaca ttgcaatttt cccggaacgc ccgttgttgc attttttgct acacgcgaga
     7561 acacccataa aaaaatcgca cctgccacta aagagaagaa cagtgtatct aaatgcactg
     7621 cccaaaagcc ttcacctgtc gataaaaaac tcaagtgatg gctaatatat tctgctgtcg
     7681 ttccagccat aacatatcct tttaaattaa aattagtggt gatgtttgct taatacaaac
     7741 gggatcatat tatttaaaaa taatgcgata aaataaccca cgaaaaacaa cacaacatct
     7801 agagcaggga taagtttaaa acagccgatc accaaaataa tagtaaccaa ccatttcatt
     7861 ccttcaccac gatagaaagc ggtcattttt gactgatttt ttgcagattt cttaaagaaa
     7921 acccaatata caaacacaag atgaggcaaa aaactcgcta aagcaccgcc tagaaaggaa
     7981 aaattaaaat tcattttcca taaagacact ccaagtgcaa aaacgcacaa gagaaaaaat
     8041 tcaaccttta atgcttgttt atattgtgat tttgctctat tgattacagc tgacacattt
     8101 tatccttttt gaataagtaa accacacaat caggctaata attagccact gttgaatcaa
     8161 agaaaatccg tgctaaatta tactttacaa atgaattgtt gcaaccgaaa agcgacacaa
     8221 aaacttgtta ttcttcacat ttttgaaaaa aaattttatt tacgttgcat ttttttgagt
     8281 aaaaccatca aaatcagtta acaaaaaaac aacaaataga ggtgtgtgta tttttctctg
     8341 tcacattatt tcaatatttg ataaattccc cttgcttaaa aatgaataaa aattcataat
     8401 aattgcatat attttcactt ccgagtagaa aatgaaataa aaaaagaaga aagaaatagg
     8461 caaaataact aatttttact tgaatgcaaa cgtttgcttg attaaactta gtcgcctact
     8521 tctaaggcta cacagataaa atttgatgat taggagtaaa acaatgttca aaccagcaat
     8581 tctggttctc actgacggtt ctgtcttttc cggcaaatcc attggtgctg acggtcacac
     8641 tatcggtgaa gtggtattta acactgcgat gaccggttat caagaaatcc ttaccgatcc
     8701 ttcttatact aaacaaatag tcaccctgac ttacccccac attggcaata ccggcattaa
     8761 tttagaagat aaagaatccc ccaatgtttg tgcctccggc ttaattattc gtgatcttcc
     8821 tcttctccat agcaacttcc gtgcgtcctc ctcactttca gattatctca ttcaacaaaa
     8881 cattgtcgct attgccgata ttgatacccg ccgtttaacc cgaattttac gcgaaaaagg
     8941 ggcacaagcc ggttgtattt tagtaggcga tgccacagaa gagaatattg ctaacgcttt
     9001 ggcatttgcc aacagtttcg gttctatggc tgggaaagat ttggctcaaa gtgtcacctg
     9061 caatgaatta tataaatgga cagatggtga atggcaatta ggtaaaggtt atgtaccgca
     9121 acaacaaacc gagttccacg tagttgccta tgattacggt gtaaaacaca acattttgcg
     9181 aatgcttgcc gaacgaggct gtcgcttaac cgttgtgccg gcaaaaacct ctgctgaagc
     9241 tgtgcttgcg ttaaatccgg acggtatttt cctttctaac ggcccggggg acccggagcc
     9301 gtgcgattat gccattaccg caatccgaaa attattggaa acgcaaaaac ccattttcgg
     9361 catttgctta gggcatcaac ttttaggttt agcggcaggc ggtaaaacca aaaaaatggt
     9421 gtttggtcat cacggagcta atcacccggt acaagattta gacagccaaa aagtgctcat
     9481 caccagccaa aaccacggtt ttgaagtaga tgaatccagc ttaccatcta atgtgcgagt
     9541 gactcaccgc tcactgtttg acggcacggt gcaggggatt gaactcactg atagaccggc
     9601 gttttcgttc caaggtcacc cggaagccag cccggggccg aatgatgttg cctatttatt
     9661 tgaccgattt gtcagtgaga tgaaaaaagt gaagtaagga cgtacctatg tgtgtccatc
     9721 aagcggtcga aatttgcaaa aaacttacca aaaatgaccg cttgtagcct gaaataaacg
     9781 agataaaaga gagcccaaaa tgccaaaaag aacagacata aacactatcc taattatcgg
     9841 tgccggtccg attgtgatcg gtcaagcgtg tgaatttgac tactccggag cccaagcgtg
     9901 caaagcgttg cgtgaagaag ggtataaagt ggtgttggtg aactccaacc ctgcaaccat
     9961 tatgaccgac ccgaatatgg cagatgtgac ttacattgag ccgattgaat ggaaaacggt
    10021 tgaaaaaatc attgaaaaag aacgccctga tgccatttta ccgactatgg gcgggcagac
    10081 agcgttgaac tgtgccttag atctttcgaa aaacggtgtg ctgaaaaaat ataatgtaga
    10141 gctgatcgga gctaccgaag acgcgattga taaagccgaa gatcgtggtc gttttaaaga
    10201 agcaatgact aaaatcggct tgaatacgcc aaaatcattc gtttgccaca gttttgaaga
    10261 ggccttagca gcacaagagc aggttggctt tccaaccctg attcgcccct ctttcacgat
    10321 gggaggctcc ggcggtggta ttgcttataa tcgagatgaa tttatcgcca tctgcgaacg
    10381 tggttttgaa gcctcgccta ctcacgaatt actgattgaa caatccgtac taggctggaa
    10441 agagtatgaa atggaagttg tgcgtgaccg tgccgataac tgcattatcg tctgctcgat
    10501 tgaaaacttc gacccgatgg gtgtacacac cggcgactcc attaccgttg ctccggcaca
    10561 aacgctaacc gataaagagt atcaaattat gcgtaacgct tcgctggcgg tattgcgtga
    10621 gatcggcgtg gacaccggcg gttcaaatgt gcaatttgcg attaaccctg caaacggcga
    10681 gatgatcgtc attgaaatga accctcgtgt gagccgttct tctgcactcg catctaaagc
    10741 caccggcttc ccgattgcca aagttgcggc gaaattggct gtaggctaca cactcaacga
    10801 attgcgtaac gacatcaccg gagggctgat tccggcttca ttcgagccga ctttagatta
    10861 tgttgtgacc aaaattccac gcttcgcctt tgaaaaattt gccaatgcag acgaccgatt
    10921 aaccactcaa atgaaatcgg taggcgaagt aatggcaatg ggaagaacct tccaagagag
    10981 tttacaaaaa gccttgcgag gcttggaaac cggcatttgc ggctttaact tgctttccga
    11041 agagcctgaa aaaatccgcc gtgaacttgc caaccccgga ccaaaccgta ttttgtatgt
    11101 tgccgatgcc tttggagcag gcttttcatt ggaagaagtt caccactatt ctaaaatcga
    11161 cccgtggttc ttggtgcaaa ttcaagactt agtacttgaa gaattagcgt tagagaaaaa
    11221 acagtttagc gatctagatg ctaacgaaat ccgccgctta aaacgcaaag gcttctcaga
    11281 caaacgtatc gcacagctta ccaaagtcag cgaaaaaatg gtgcgggatt accgccatac
    11341 ttacgctatt ctaccggtgt ataaacgggt agatacctgt gcagccgagt ttgcctcaga
    11401 tacggcttac ctctattcta cttacgagga agagtgtgaa gccaaaccgt ctgatcgcaa
    11461 aaaagtgatg attttaggcg gcggaccaaa ccgtatcggg caggggattg aatttgacta
    11521 ctgctgcgtt cacgcctcgc ttgctctgcg tgaggcaggt tatgaaacca ttatggtgaa
    11581 ctgcaaccct gaaaccgttt ccaccgattt cgacacctcc gaccgcctct atttcgagcc
    11641 gctaacatta gaagatgtac tggaaattgt gcgtgtagaa aacccgtggg gcgtgattgt
    11701 gcattacggc ggtcaaacac cactgaaatt agcgaatgcc ttatctgatg ccggtgtaaa
    11761 cattatcggg acttccgccg acagcattga tgccgccgaa gaccgtgaac gtttccaaca
    11821 aattctaaac actctcggtt taaaacagcc ggcaaatcgc accgcccgta atgcgttgga
    11881 agcggtggca ttggcaaatg aagtaggcta tccgctggtg gttcgcccat cttatgtgct
    11941 aggtggtcgg gcaatgcaaa ttgtgtataa cgatgaagag ctaaaccgct atatgcgtga
    12001 agcggtatcg gtttccaacg acagcccgat tttactcgac cacttcctca ataatgcgat
    12061 tgaagttgat gtggattgca tttgtgacgg cgaaaatgta ctcattggcg gcattatgca
    12121 acacgttgag caagccggta ttcacagtgg cgatagtgcc tgctcactac ctgcctattc
    12181 gttaagcggt catgttttgg acgaaattcg caaacaaacc aacgcaatgg cgtttgctct
    12241 cggtgtgaaa ggcttgatga acgtacaatt tgcagtacaa aatgaggtcg tttatgtgtt
    12301 ggaagttaac cctcgagcca gccgtactgt accgtttgtc agcaaagcta ccggtcgccc
    12361 actggcaaaa atcgctgctc gcgtgatggc tggtgaaacc cttgccgact taaatgcatt
    12421 agaggaaatt atcccaagca aattcttcgt taaagaagcg gtattcccat tcatcaaatt
    12481 cccgggtgtg gataccattc tcgggcctga aatgcgttct accggcgaag tgatgggcat
    12541 aggtaatacc tttgctgaag cgttcttcaa agcacaactg ggtgccggtg aacgaattcc
    12601 aaaagtcggc aaagtgttta tgtcggttat tgaagagcat aaacctgctt taatttacat
    12661 tgccaaacgt ttccaagaac aaggctacgg tttatgtgcc accttcggca ctgcaaactt
    12721 cctacggcaa cacggaattg cagtccaaac ggtaaacaaa gttcgtgaag ggcgaccgca
    12781 tattgtcgat gcgatcaaaa acggcgaaat tgcgttggta atcaacaccg tcagcggcga
    12841 gcctgaagtg attgccgaca gccactctat ccgccgtacc gccttgcaac aacgtgtgcc
    12901 tatttacacc acccttgcag gtgctgatgc tatctcctac ggcgtaaaac atatcaatga
    12961 gtttgatgtg tattcagtgc aggaattaga acaaaaggct aactaaaata aagctaaaat
    13021 gacaagcggt cagattttgc aaatttttta caaattctga ccgcttgtgt ttgtagagga
    13081 ttatttagta aatttatatg ctaaatcatt ccagcgtaat tcatttttga gttgtggtag
    13141 ctcggtattt tggttgatat ggataaactc aataccaaaa tattcagcga acattcgtag
    13201 catatcggca tcaatatcta aactaaatac actatgatga gcaccgccgg ctagaatcca
    13261 tgcttgagta cctacataaa aatttggttg aagcttccaa aaagcatgcc caactggtaa
    13321 atttggcatt ggatttggtg aggcgatagc gtctaaatcc gcaacaacca ttctaaaacg
    13381 gtctcccata tctacaacgg ttgcattcac tgcttttccc gccttactac tgaaaattaa
    13441 gcgaacagga tctgccttac cgccaatacc tagcggtcga atggctaatg ttgatttctc
    13501 tttggcaata gacggacaaa cttcaagcat atgagccccc aataccactt ggttttgttc
    13561 atctaaatca taggtgtagt cttccataaa ggaagaaccg tttggtaagc cataacccat
    13621 cactttcact tcacgcacaa gagctgcggt tttccaacct ccttcaccac caaatccgta
    13681 gccttgttcc attaaacgct gaacagccaa gcccggtaat tgtttaatcc catttagatt
    13741 ttggaaatta tcagtaaaag ctttaaatcc accattatct aagaatgttt ttaagccgat
    13801 ttcaatacga gcagaatatg cgagagattc tcttgctgaa ccattttctt gcaagctatc
    13861 ctcaacatta tacaagcggt cagattttgc aaaaaaatga ccgcttgttg ccatttctaa
    13921 agtgtgatct acctctcaaa tttacaaaat tttttataac atattgattt aaaatgtttt
    13981 ttatattttt cctttaattg actttaattt gtcttaagag taacttataa aacgtgattt
    14041 tactatttga aatattgagg tattcaagat gactattcga gtttcctatg aagaattaaa
    14101 agctcaattt aaacgtgttc tgttggctcg caatgtgcgt gaagagattg ccgaagagtg
    14161 tgccactgtg tttgccgaca ccactcaagc gggtgcttat tcacacgggg taaaccgttt
    14221 cccacgcttt attcagcagt tagagaacgg tgatattgtg ccggaagccg tgccgactaa
    14281 agtgctttca ctgggggcga ttgagcagtg ggacgctcac caagccatcg gtaacttaac
    14341 cgcaaaaaaa atgatggaca gagcaatgga gcttgcatct gaaaacggca tcggcgtagt
    14401 ggcgttacgt aatgcaaacc actggatgcg tggcggttct tacggatggc aggcggcaga
    14461 gaaaggctat atcgggatct gctggacgaa cgcccttgcg gtaatgccgc cttggggggc
    14521 gaaagagtgc cgtatcggga ctaacccgtt aatcattgcg gtgccgacta acccaatcac
    14581 gatggtggat atgtcttgct caatgtactc atacggaatg ttggaagtgc atcgccttgc
    14641 tggtcgtcaa acctttgtcg atgctggttt tgatgatgac ggcaacccaa cccgtgatcc
    14701 ggcaacggtc gagaaaaacc tccgtctaat gccgatgggc ttctggaaag gttcgggctt
    14761 atcgattgtg ttagatatga tcgccacctt gctctctaac ggtgaatcca ctgcggcagt
    14821 caccgaagat aaagacgatg aatattgcgt gtcgcaagtt tatatcgcta ttgaagtgga
    14881 tcgcttaatt gacggcaaaa ccaaagacga aaaactcaac cgtattatgg aatatgtgaa
    14941 aaccgcagaa cgtgccgacc ctgatgtggc agtacgttta ccgggccacg agttcaccca
    15001 aattctagcc gataacaaag ccaacggcat tccggtggat gacaccgttt gggcgaaatt
    15061 acaggcgttg taattgcaaa ttgaccggta gggtgggcgt aagcccacgc attagacaca
    15121 atcataagat gacgtgggct tacgcccacc ctacaagcgg tcatttttcc gcagaatttt
    15181 acaaaacgga ggtatgaatg ttttttggtc atatttcaca agttaaagcg aatcgatacc
    15241 cgccggcgat ccaaattgcg ttgaactatc tgaaaaatac cgattttgat gcgatggaag
    15301 caggggttta cgaactcaaa ggcagacaaa tttatgtgca ggtgttggat ttgaacacca
    15361 aatcgaaaca cgaatttcag ccggaagtgc atcgcaatta cctcgatgtg cagtatctac
    15421 accgaggcaa agagataatg gctgcggcgg tggataccgg caccaatccg attgcgatgg
    15481 aatacaaccc tgagcgggat attcaatatt atcaatccgt tgccaacgaa aatgaatttc
    15541 gctgcgttga aggcaatttt tgacggcacg gaaaccattc gcaaagtggt ggtaaaaatt
    15601 gcgatgagcg aaattgagga gcaacgatga aagccttagc tcaattagtc ggaaaactgt
    15661 tagaaatctt ggtggtggtg attttatccg caatgtcgat tttggttttc gtcaatgtgg
    15721 tactacgtta cggttttaac agcagcatta gcgtgaccga agaggtgtct cgctatatgt
    15781 ttgtttggtt ggcgttttta ggggcggtgt tggcatttag cgaaaatcaa cacgttaaag
    15841 tcacaatgct gaccgataaa ttatcgccaa cggctcgtaa tatcttaagc gtagtcacag
    15901 atttagcgat gttgttctgt tgctacttaa ttgtggacgg tagctggatt caatttaacc
    15961 tcaacctgaa taactttgcc ccgatttcag gcttaccgca aggcatcact ttccttgcca
    16021 gcacagtggc aggggtatta atcggtttat taattattgc ccgcattgtg gcaacggttg
    16081 gcgtgattgc aaaaggagaa aaatagatga ctgtggtaat ttttctttcc gtcttgcttg
    16141 gctcgatttt attgggcatt ccggtagctt tcgccctgtt ggtctgcggt gtggcgttaa
    16201 tgttgcattt agatctgttc gatgcccaaa ttttggctca acaaattgtg agcggtgcag
    16261 acagtttctc gctaatggca attccgttct tcattcttgc cggtgaaatt atgaacgagg
    16321 gcggtctctc caaacggatt atcgacctgc cgatgaaatt agtcggtcat aaacggggcg
    16381 gtttaggttt tgtagcaatt ttagcggcga tgattatggc aagcctttcc ggttcggcgg
    16441 tggcggatac cgcagcggta gtcgcaatgc tactgccgat gatgaaaacc accggttatc
    16501 cgattgaccg ctctgccggt ttaatcggta cggcagggat tatcgcccca atcattccgc
    16561 caagcattcc gtttatcgta tttggtgtgg ctagtggcgt gtccattacc aaactgttct
    16621 tagccggtat tttcccgggc attatgatgg ggatctgctt ggctgccctt tggtggtggc
    16681 aggcaaaacg tttggattta atgaccttct ccaaagcgac caaagaagaa ctttgcattt
    16741 catttaaaaa cagtatttgg gcgttattgt tgcctgtcat tattatcggt ggtttccgct
    16801 cgggaatgtt caccccaacc gaagcgggtg cggtcgcaac tttctatgcc ttgattgttt
    16861 cactgtttgt ttaccgtgaa atgaagttca aagatttata caaggtagtg ttggcggcag
    16921 cgaaaaccac ggcagtagtg atgttcttag tggcagcggc aaatgtgacc ggctggctga
    16981 ttaccgtagc ggaattaccg atgatgctca ccgagctgtt agagccgtta attgaaagcc
    17041 cgaccacact cttattggtg attatgttag cggtgtttat tatcggaatg gtgatggact
    17101 taaccccaac cgtgctgatt ttaacgccgg tattaatgcc gttggtggaa gaggcaggca
    17161 ttgacccggt ttacttcggt gtgctgttta ttcttaacac ctccatcggc ttgattacac
    17221 caccggtcgg caacgtgcta aacgtgatta ccggcgtgtc gaaactgccg ttcgaccaag
    17281 cggctaaggg cgtaatgcct tacctcgtaa tgatgatttg tttactactg ttgttcgtgt
    17341 tcttcccgtc actggtgtta gtgccgttaa gctggatgca gtaatggttt gaaccgaaac
    17401 aagcggtcga attgacgcaa aaatttgcaa atttttttgg caaaacagac cgcttgcaac
    17461 tcaattttta atcacaggag aaccctatga aattatttaa tttaaaaacc ttatttgcct
    17521 tagtggcagg cgttgcggta atgagcggct ctgcaatggc agaaacctca ctgcgttttg
    17581 gttatgaagc cccacgttcc gatacccaac acatcgccgc caaaaaattc gatgaattat
    17641 tggcagcaaa aaccaaaggt gaaattaaat taaaactgtt tccggacagc accttaggta
    17701 atgctcaaac gatgatcagc ggcgtgcgtg gcggtactat cgacattgaa atgtccggct
    17761 cgccaaactt taccggctta gagccaaaac taaatgtgat tgatattccg tttattttca
    17821 aagatcgtga acacgtttac aaagtattag acggcgaagt tggtcaaggc ttattaaaag
    17881 atttagaagc ccaaggctta aaaggcttag ccttctggga cgttggcttc cgtgctttct
    17941 ccaactcaaa acaccctgtg accaagccgg aagacatcaa aggcttaaaa gtccgcacca
    18001 accaaaaccc gatgtacatt caagccttca ccttactagg cggcaacccg gtgccaatgc
    18061 cactttctga gctttacacc gcactcgaaa cccgtgccgt tgatgcccaa gaacacccaa
    18121 tcggcatttt ctggtcggca aaactgtttg aagtacaaaa acatttaagt ttaaccaacc
    18181 acggctacac cccgttaatc gtggtgatga acaaagcgaa gtttgacggc ttagctcctg
    18241 aattacaaac cgcattagtt gaagccgcaa aagaagccgg tcaattccaa cgtgatctca
    18301 acgtgaaaaa cgaaaaagag atcatcgaaa aattacgcaa acaaggcatc gaagtgatcg
    18361 aacaagtgga taacgccccg ttcaaagcag cgattgaagc ggaagtccgc aaagctttcg
    18421 tggaaaaaca cggcgatgaa ttattgaaaa aagtggatgc gttagcacag taattgactt
    18481 tattttagtc taaagctccc tccgtttggg gggagttgtt gtatagactc tactatagga
    18541 gagactatga aactgtttaa tttaaaaact ttagccgctt tcgttgccgg ttttgcactg
    18601 ttttcaaccg cacaagcaga aacctcattc cgctttgcgt atgaagctcc tcgttctgat
    18661 actcaacata ttgcagcgaa aaaatttaat gatttgctgc aagaaaaatc ccaaaaaggg
    18721 ctgaaattaa gcctcttccc tgatagcacg ctcggcaacg cacaaacggc gattagcggt
    18781 gtgcgtggcg gtactattga tattgcaatg tccagctcct ctaactttac cgggttagaa
    18841 ccaaaactga atgtgattga tattccgttt attttcaaag acagagacca cgcctataaa
    18901 gccttagatg gagagattgg tcaaggttta ttaaccgcat tagaggctca cggtttgaaa
    18961 gggttggcgt tttgggaagt tggtttccga gcgttttcca actccaagca cccgatcacc
    19021 aaaccggagg atattaaagg cttaaaaatc cgtactaacc aaaacccgat gtatattcaa
    19081 gccttctcta ttttaggtgc aaatccggtg ccaatgccgc tttccaagct ttacactgca
    19141 ctggaaacca aagcggttga tgcccaagaa cacccaatcg gcattttctg gtcggcaaaa
    19201 ctctatgaag tacaaaaata tttcagcttt actaaccacg gttacacccc gttaattgtg
    19261 gcgattaaca aagcgaaatt tgatgcactg ccagccgagc aacaaaccgc attagttgaa
    19321 gcggcaaaag aagccggaaa ataccaacgc caacttaacc tagaaaatga gcagaaaatt
    19381 atcgactcgc tcaaaaaagc aggtattgaa tttgtggata acttagatac cacaccgttc
    19441 aaagatgccg tatcggctga aacccgcaag gcatttatcg agaaaaacgg tgatggctta
    19501 gttaaagcca ttgatgcatt ggcgaagtaa aaatagagct acaaagtgct cggttaaact
    19561 aacctcacac gaatcgtgtg aggtacaagc ggtcaaaatc cgcaaaattt ttacacatct
    19621 ttcctcaaag gaggaacaaa tggcacagcc cattttaagt atgcagcaca tcatcaaacg
    19681 ctttggtagc catacggcgg tgaatgatgt cagccttgat atccactcag gcgagatcgt
    19741 tgccttactc ggtgaaaacg gtgcaggtaa atcgacccta atcaaaatcc ttgccggtat
    19801 ttatgaccgt gacgagggtg atattctttt ccataaccaa aaaatccaat ctgcccacgc
    19861 tattgagaaa ggcaacaaaa agcccatcgc ttttatccac caagatttag gcctaataga
    19921 atggatgacg attgccgaaa atatggcatt tgtaatgggg ttccctcgca aatttggctt
    19981 gattgactgg gcgaaagtgc gagagcagtc gcaaaaagcc cttgattttg taggcattaa
    20041 actctctgcc gacactcgag tgtttgattt aagccgtacc gaaaaagcct tactcgccat
    20101 tgcccgtgcg attgccgtca atgcagaaat cttggtttta gacgaaccta ctgcttccct
    20161 acctgcctct gatgtagagc atcttttcac tgtgttaaac cgcttacgtt cccaaggtgt
    20221 gggaatgatt tatgtgaccc accgtttaga tgaagtgatc gccatttccg accgcatttt
    20281 ggtgatgcgg gacggtttcc cggttgcaga agggcaaacc aagctctatg acgtcaaagg
    20341 cttggtcaaa gcgattgtag gcgaagagag ccgtggcaga cagcgggtgg atttaccaac
    20401 cgatactcct gaaattttaa gcctgcaaaa tgtcgtggtt ggcgacaccg gcccggtgaa
    20461 tttccgtctg cacaaaggtg agatgattgc ccttgccggc ttgcgtggag cagggcagga
    20521 agaaatcggc cgcttattat ttggggagcg aaccttagac aaaggcgaaa ttcagttaga
    20581 caagcggtca tattctgcta aagatccgca agatgcgata gccaaaggtg tggcattggt
    20641 tgcgggagac cgcacccgtg aaagcgtgtt tatgtcaatg actaccagtg agaacctgtt
    20701 tatcaacccg gtactaagcg gtcattcacc attaaaacgc tactcccgcc gtgaagagtg
    20761 gggtgagagc tggtacaaat tccaactatt cgatattcgt ccgaaaaatt tgtttattga
    20821 tgccagtgcg ttatccggtg gtaatcagca gaaaatcgtg ttggcacgtt ggatgcacct
    20881 caatacgcct gttctgattt tagaagaccc gactgccggc gtggatgtag gagcaagggc
    20941 agagatttac gacttgctca acaaagccct tgcagaaggg gtcgcaatta ttgtgatttc
    21001 caccgacttt gaagagatcg ctcatttgtg taaccgagca ttagtcttca accgagggga
    21061 aattgccggt gaactactga acgaagaggt gactttcgcc aatttgctgg cgttggcatc
    21121 ggatagtcag tcgaaaaaac aataacttac tctcgcccgc ttgcgggaga gagacagcta
    21181 aaaatagcgt caggctattt ttagcagaga gagggtaaac aagcggtcat ttttcttaaa
    21241 aaatattgcg aaccctctcc ctccgaaagc ctaacggctt tctcctccct ctcccgcaag
    21301 cgggcgaggg gaaaatgcag aattttaacg gagtaattta tggctcaaac aaacatcaaa
    21361 tcaaccgcac tggaacaacc ggtatctatc gcccgtgacg gttttatggc atggttttca
    21421 caaatgtcca ctcgttatgg cttactgtgg ttatgtgtgt tattggtgat tattttctca
    21481 cttaccaccg aatctttcgc ctcaatgctg acattaaatg cgattttaga aagtaaatcg
    21541 aaaattgccc tacttgcttt ggcagccaca actacaatga ttgtcggcaa aatcgacctg
    21601 aacgtgggtt tcggtattgt gttgtggcac attcttgtga ttactctgca agtccaatac
    21661 ggcttctcgt ggtatatggc gatcttaatc gtgttagtga ttgccgctct ttacggcttg
    21721 ctgaatggga ttttagttgc tcttgctgat atcgatagct ttgtggcaac acttggctca
    21781 ggcacagtgc tttatgccgt agcactctgg cactcgggcg gtcgccaaat tgtcggggat
    21841 ttacccgatg aatttatcgc actcaacagc acagaaattt tcggtatccc gatttctgct
    21901 ttctatgtgc tggcagtggc tatcgtaatg tggttggtga cagaacatac cccgaccggt
    21961 cgttgtatgt atgcggttgg tggcaaccca acggcagctc gcctaaatgg tatcaatatt
    22021 aaaaaataca ccattgtgcc gtttattgtc tctagtgtaa tcactgcttt cacaggcgta
    22081 ttgatctctg ctcaacaagg cgttggtcag gcaagtgtcg gtatggacta cttactgccc
    22141 gcattggttg gggcattctt agggagtacc actattcgcc cagggcgtat taacgtatgg
    22201 ggaacagtgg tggggattgc cattcttgcc atcggtattt caggtattca acaattcggt
    22261 ggagcgttct gggttgagcc actctttaac ggtgcaacac tgttactttc catcactatt
    22321 gcaggctatg cccaacgcaa acgcttgtta aatcaaaaag ctgtacagaa aaaatcgacc
    22381 aactaagagg atttgattat gaaaaaagca tttcgtacaa ccttaactgc aatcgcaacc
    22441 ttaactgcta ttgctttcgg aaataatgcg tttgccaatg acgacccgtt cgtacaagaa
    22501 gcaaaacagc ttgtcgcagc agctacggct aagcaagaaa aatgggacgg accgacaacc
    22561 ggccctcaat tacaaaaaga gaaaactgtg atttttattg cctctgatat gaaaaacggt
    22621 ggtgtacttg gtgtgattga cggaatgaaa gaagctgttg gcgtaacggg ctggaagtta
    22681 gatgtattag acggtgcagg tacggtaaac aaccaactcg ccgcacttaa ccaagcgatt
    22741 gcccgcaaac cggatgcgat tgtgattggt ggctggaacc cgaatgtggc gaaaatccca
    22801 ctacaaaaag cgactaaaaa cggcattaaa cttgcagctt ggcacgcaac accggagccg
    22861 ggtgcgattg ataaatacgg cattttctac aacgtgacct ctgactcaga cgaaattgca
    22921 cgcttatcgg caatgcttgc ggtggcagaa tctaacggta aggcaaaagc gattatttta
    22981 accgactcgc tatatgaaat tgcgttacgc aaagcgaacg tcatgaaaga agttatcgaa
    23041 aaatgtaaag agtgtaaggt gttagagttt atcgacacgc cattggcgga tacctcaagc
    23101 cgtatgccta acctcacttt cagcttactg caaaaatatg gcgacgattt agagtatgcg
    23161 ttggcaatta acgatctcta ctttgacttt atggctccgt ctttacgcac cgctggtaaa
    23221 gataaaccgt ttagcatttc cgcaggtgat ggctcagtaa cggcttatca acgtattcgc
    23281 aatggtgata aacagtttgc aaccgtccct gagccactta acttacacgg ctggcagtta
    23341 gtcgatgagc taaaccgtgc tttcgctaac gaaaaaccgt ctggttatat cacaccggct
    23401 cacctagtga ctaaagaaaa tgtggcgttt gacggtggtg aaaacaacct gtatgcccca
    23461 caaaacggtt acaaaggcgc ttacaaagcg atttggggcg tgaagtaatg acgtaggggc
    23521 aaataaatat ttgcctcgaa caagcggttg ttttttgcaa agattttgcg aaatttaacc
    23581 gcttgtcata aaaaatagag agggtaatac aaatgagcaa taaatttatc cccaaaatct
    23641 ccaaccctcg ttttaatgag ctggttggga atacgtttga acttgaagag ctttttgata
    23701 aggcaatctg ggcagaaggg ccggcgtgga gcaagccaca acaagccctc tattttagtg
    23761 atgtaaaagg ttgcacaatg taccgctgga cagagcaaga tggtacacag gttttccgcc
    23821 agccgtctta tttttctaac ggcaatgcgt ttgatgcaaa cgacaacttg attacctgtg
    23881 aacacggcaa tcgaggtatc agtttaacca cgccaagcgg tgaatatcgt tttttggtcg
    23941 gtcaattaga cggaaaacga ctgaactcac ccaatgatgt ggtggtaaaa tcagacggca
    24001 tcatttggtt cactgatcca ccttacggta ttttgtcgga taacgaaggc aaacagtcgc
    24061 caagcgaaat tatcggttgt tatatttact gctatgatcc gaaaaccgac aagctgaata
    24121 ttgcaacttt caacacgatg cgaccaaacg gcttggcctt ctcgtcagac gaaaaacaac
    24181 tctttgtggc agatatgtcg agcgtggaat ttgacgaaga tggcttacac cacttagtcg
    24241 tatttgatgt ggacggtaat aaactaaaaa atcgccgaga tgtggcggaa attagtcccg
    24301 gcattccgga cggcttccga attaaacaaa acggcgtaat tttctgctct tgtgaagagg
    24361 gaattattgc tattttacct gacggcacgg agctgggacg atttgtgctg ggtaagctaa
    24421 cctcaaattg tagctttggc gatgatgaac aaacactgtt tattacttgt tcgaatagcg
    24481 tttatcgttt aacaattaaa tagcagaatg cattaagtgc gtctgttgta gcattacaag
    24541 cggtttcttt ttcaaaattt tttacaaaca aataatggat aacaaaatga actacacact
    24601 cggcattgat tgcggtggga cttttatcaa agccgctctt tttgatacac aaggtaatat
    24661 tcaagccctt catcgtgaaa acgtttcggt aatcagtgaa caggcaggtt atgcagagcg
    24721 tgatatgtca caactctggg ctatttgtgc ggaagtagtg cgttcaacca ttgaaaaaag
    24781 tggggtaaac ccagcggata ttaaagcagt agggatttcc gctcaaggca aaggggcgtt
    24841 tttactggat aagcagaatc gaccgttggg gcgtgcgatt ttatcttccg accaacgttc
    24901 ccttgagatt gttaaacaat ggcaggctga aggcattccg caacaacttt acccgattac
    24961 ccgccaaact ctttggacag gacaccctgt gtcgattttg aagtgggtgc agcaaaatga
    25021 accggagcgt tatgcacaaa tcggggcggt gttgatgtcg cacgactatt tgcgtttttg
    25081 cttaaccggt gagttgcatt gcgaagagac caacatttcc gaaagcaatc tttacaatat
    25141 ggaaaaaggc gaatacgacc aacagttagc cgatttgttg ggaatgccgg atgtgttgga
    25201 gaaattacca ccagtgattg aaccgaataa aatttcggga tatgtgactg aaaatgccgc
    25261 caaattaacc ggtttagcgg tgggtacgcc gatagtcggt ggcttgtttg atgtggtttc
    25321 taccgcacgt tgtgccaatt tagatgacga aaccaaactg aatgcagtgc tgggaacgtg
    25381 gtcggtggtg agcggcatta ccgatcatat tgatgcaagc caatcattac cttttgttta
    25441 tgggcgttat gccgaggcag ggaaatttat cgtccacgaa gcaagcccga cttctgccgg
    25501 taatttagag tggtttgtga atcagtggaa actcgattat gtgaaaatca accaagctgt
    25561 tgcccaatta ccgccggcgg caagctcggt gctgtttgtg ccgtttctgt atggctcaaa
    25621 tgcaggctta ggaatgcaag ccggtttcta tggtatgcaa gcccaccata cccaagccca
    25681 tctcttgcag gcaatttacg aaggagtgtt gtttagcttg atgagccatt taaaccgtat
    25741 gtttatccgc tttccaaagg ctgacgtgct gcgagttacc ggcggaccgg tgaaatctaa
    25801 agtttggatg caaatgttgg ccgatttaac cggaatgcgg cttgaaatac cacaaatgga
    25861 agaaaccggc tgcttgggtg cggcattaat ggcaatgcaa ggggttgggc tggatataag
    25921 ccaagttcaa gccctaaata atgaaatgca ggtgtttgag ccaaatccgg aaaattatgc
    25981 ggcttatcag acgaaatatc agcgttacca aaaattaact gaagcattaa atacaatgat
    26041 ttaacctgaa tttatgcttt tacaagcggt aatatttggt tacttttttg caaaaattac
    26101 tgcttttttg tttatttaat ttatgaattt aattaaataa tctttaaatt aaaggttgac
    26161 attattaaat gtgggctgta ttttaataat gaaacataaa tcaattatgt tttattttta
    26221 tagattacgt ttaattaaat aaggagagca attatggcta aaagcttaga tgcaaaacgt
    26281 gaagagttaa caaacgagat tcgcgatatt ttgaaaaatg cagaggaatt atttaatgaa
    26341 acatctgatt cttctacgga ggaatataaa aagttaaaag ataaattagc aaaacagttt
    26401 gatgatgtaa aagatcgttt tgcaacatta aaagatgata ccgttgatag tgcaagaact
    26461 gtagttaaac aaactgatac cttagttcaa gataatccgt ataaagcaat taccgttgcc
    26521 ggtgtggtag ggttattatt aggtgtttta atttctagaa gataattatc tgtaattcgt
    26581 cattaagtca ttaagccacg ccatatttgg ggtggcttat tatttaatat aaggaatggt
    26641 tataatgtta gataatatta aatccggatt tagaaatagt ctcattacat tattggaaat
    26701 agctcaagtg cgtggtgaga tggcaagaat tgaaattaat gagcaaaaaa atcaattaat
    26761 ttcagtactt atatttatct tattggcttt tgtattttta ttagtttctt ttgtgagttt
    26821 attatttggt ttagataa
//
LOCUS       DANMCL010000029        25946 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.029, whole genome shotgun sequence.
ACCESSION   DANMCL010000029 DANMCL010000000
VERSION     DANMCL010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 25946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25946
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.029"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            28..753
                     /gene="fkpA"
                     /locus_tag="PXF40_001099"
     CDS             28..753
                     /gene="fkpA"
                     /locus_tag="PXF40_001099"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5802451.1"
                     /translation="MLKTKLSLFTLIVGTLFSTNVMAEEKADPKFVDDSSYAVGVLMG
                     KNINGVIESQKDIFTYNQDKILAGVQDTLKKTGKLTDEDLQKQLKSLDAYLSAKEAKI
                     NEEKTKATVAAGDKFRADYKKQSGVKETASGLLYKIEKAGEGNSPKAEDTVKVHYKGT
                     LTDGTVFDSSYDRGEPIEFQLNQLIPGWIEAIPMLKKGGKMEIVVPPALAYGDRAAGK
                     IPANSTLKFEIELLDFKAADAKK"
     gene            850..1506
                     /locus_tag="PXF40_001100"
     CDS             850..1506
                     /locus_tag="PXF40_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5802452.1"
                     /translation="MTKKFTPFSDEDHAILASYFPMVDGIAALIGEHCEIVLHSLEFL
                     EHSAIYIANGHNTNRKIGSPITDRALKSLHHMATDSVSKPYFTKAKGGVLMKSITIAI
                     RNGKQHVIGLLCININLEVPTSQFLNSFIAPVDTASEVTFASSVEDLVSQTIQTTIDD
                     VMADRQISNNNKNRQIVISLFEKGIFDIKDSINQVAEKLDISRHTVYLYIRQIKQDND
                     "
     gene            1506..1883
                     /gene="tusD"
                     /locus_tag="PXF40_001101"
     CDS             1506..1883
                     /gene="tusD"
                     /locus_tag="PXF40_001101"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HDL5802453.1"
                     /translation="MDYVLAIKSPVYGSQGAFLAYQVAEELLKANHTICQIFFFQEGV
                     SNANALVNPASDEVNLVEMWKKLAKLHRLPLHLCIAAAQRRGVVDEQISANATHNLAE
                     GFTLAGLGEFSQAVLKADRLLTF"
     gene            1885..2256
                     /gene="tusC"
                     /locus_tag="PXF40_001102"
     CDS             1885..2256
                     /gene="tusC"
                     /locus_tag="PXF40_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HDL5802454.1"
                     /translation="MKKYKLAFLFTQPPFGSAVSREGLDALLAASAFCDEQEIAILFI
                     NDGVFNLIADQQPEKLLQKDHISTFKLLELYDLTECFICQESVSLRGLDNADWLLRML
                     QFKTHAEMIALLNQAEKVMTF"
     gene            2266..2541
                     /gene="tusB"
                     /locus_tag="PXF40_001103"
     CDS             2266..2541
                     /gene="tusB"
                     /locus_tag="PXF40_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HDL5802455.1"
                     /translation="MLYTLSKANYDEETLNFFFSHLSENDAVVLWQDGVLQAVKSPQF
                     FAKLPRCYLLAQDVQARGLQEKLTAFQCISLSELVKLTAVYFPQVAL"
     gene            2657..3556
                     /locus_tag="PXF40_001104"
     CDS             2657..3556
                     /locus_tag="PXF40_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802456.1"
                     /translation="MVMAEENNTWVDKKHETVSTTLDRWANNINSWLGDADPDKPGTA
                     SLRVMLDSRWDKHDKFTYKPRVRGKIKLPILKKHLNVVFGDDELDNELTDKNHAGKLY
                     KNVNPNKRYNSREARDSNSSIGLRWSDGIKALGIETDLDAGIRSGSDIFGRLRISKDW
                     KITDQFSTRLEQIYRYGSESKHYLRTNFENKYTETDTTFIMNHTNFEYRHDVDEERSW
                     GNSLYRQHNFKPLTHISYGISMGGRLDKELSKFNYWGPFVSYRQPIWRNWLFIQPEIS
                     FYNDKDKDRKHFIQTFVRLEAIF"
     gene            3906..7931
                     /gene="rpoB"
                     /locus_tag="PXF40_001105"
     CDS             3906..7931
                     /gene="rpoB"
                     /locus_tag="PXF40_001105"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HDL5802457.1"
                     /translation="MAYSYSEKKRIRKSFGKRPQVLNVPYLLTIQLDSFEKFIEKDPE
                     GQQGLEAAFRSVFPIVSNNGATELQYVSYELGEPVFDVRECQIRGTTYAAPLRVKLRL
                     VSYDREAAAGTVKDIKEQNVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYTTE
                     EILNLFFEKIKFEIADNKLLMTLVPERLRGETASFDIAANGKVYVEMGRRITARHIRA
                     LEKDNVTQIEVPVEYIVGKVAAQDYVDLSSGEVICPANMEISMEMLANLSQAGYNQIE
                     VLFTNDLDHGPYISETLRVDPTYDRLSALVEIYRMMRPGEPPTKEAAEALFDNMFFSA
                     ERYDLSAVGRMKFNRSLEIPEGVGSGILSNDDIIGVMKKLIEIRNGRGEVDDIDHLGN
                     RRIRSVGEMAENQFRIGLVRVERAVRERLSLGDLDGVTPQDLINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRLCPIETPEG
                     PNIGLINSLSVYARTNNYGFLETPFRKVVNGQVTEEIEYLSAIEESNNIIAQANSNLD
                     ENFRFTDTYVTCRQQGESGLFKPEEVQYMDISTQQVVSVAAALIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAIVAKRGGTVQYVDASRIVVKVNEDE
                     TIPGEAGIDIYNLIKYTRSNQNTCINQVPCVNLGEPVARGEILADGPSTDLGELALGQ
                     NIRVAFMPWNGYNFEDSMLVSERVVQEDRFTTIHIQELSCVARDTKLGAEEITADIPN
                     VGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGTSGTVIDVQVFTRDGVEKDKRAKEIEEMQLCEAKKDLAEELEILEAGLF
                     TRVRNLLIEGGVKESALDGVAREKWLEQTLEDEAKQNQLEQLAEQHEELRKEFERKLE
                     IKRNKIIQGDDLAPGVLKVVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPVEDMPYD
                     ENGQPVEIVLNPLGVPSRMNIGQILETHLGLAAHGIGDQIDKMIKQQQEVAKLREYMQ
                     KAYDLGHGSQVVDLSTFSDEEVMRLAQNLRKGLPLATPVFDGAHESEIKGLLELGGLP
                     TSGQITLYDGRTGEKFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKA
                     QFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGTHYMEPGIPE
                     SFNVITKEIRALAIDMELDEA"
     gene            8194..12477
                     /gene="rpoC"
                     /locus_tag="PXF40_001106"
     CDS             8194..12477
                     /gene="rpoC"
                     /locus_tag="PXF40_001106"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HDL5802458.1"
                     /translation="MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPET
                     INYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRER
                     MGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
                     LTEEQFMDAEERWGDEFEAKMGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKI
                     TKRLKTLEAFLQSGNKPEWMVMTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINR
                     NNRLKRLLDLVAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKG
                     KQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFRPFIYSKLENRGIA
                     STIKAAKKMVEREDPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPLLIEGKAIQL
                     HPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNVLSPASGDPIIVPSQDVV
                     LGLYYMTREKVNGKGEGMYFLDPREAEKAYRTGQAELHSRVKVRVTEYEKNEAGELEA
                     KTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKKAISKLINESYRRLGLKESVVLADQ
                     IMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEAEVAEIQEQFNGGLVTAGERYNK
                     VIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASFNSIFMMADSGARGSAAQIRQ
                     LAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLT
                     RRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTDE
                     VLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCYGRDLARGHLINQGE
                     AVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIKLTNAKFVTNKEG
                     KIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVANWDPHTMPVIS
                     EVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDSNGKD
                     ILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLPRVADLF
                     EARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFEGEMV
                     QRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLR
                     KAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEA
                     GIAVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE"
     gene            12872..14182
                     /locus_tag="PXF40_001107"
     CDS             12872..14182
                     /locus_tag="PXF40_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase
                     domain-containing protein"
                     /protein_id="HDL5802459.1"
                     /translation="MDISWYKPRNYLHFDSPITLQQAIKLVANPNNVVKHSFYPFLSY
                     TLSVAKIKKDKNEGKLVRLIKNRGISYSSHKDSHIFSYYAYLLNEKYENLLKNKYYIL
                     DDSILAFRKLNKSNIDFARIAFDSIRSAQNCTVLGLDISKFFDHIDHKILKDMWCKVL
                     GVPSLPEDHHSVFKAITKFVKVDRDTVFEFFNISLHNPRKNGKNRICSPREFREYRKL
                     KKPDLFNDNPAFFINKGQKGIPQGSPISALLSNIYMLEFDVLVKEKIMECKGSYFRYC
                     DDILCIIPNEYEEFILDYITGEIKSKLKLEINKDKTEVVKFQYCNRTKKIINEKKLQY
                     LGFILHNNSISIRSSAFTRYSNKMKRGVSLAKQTQGKYNRIRIRRGVAIKGIYKRKLF
                     SKYSHFGKSNFISYGKRAYSSMDSKVIKNQLKPLWYRLKKEIYL"
     gene            complement(14434..15714)
                     /gene="hemL"
                     /locus_tag="PXF40_001108"
     CDS             complement(14434..15714)
                     /gene="hemL"
                     /locus_tag="PXF40_001108"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HDL5802460.1"
                     /translation="MSISEQLFEQAQKVIPGGVNSPVRAFKGVGGTPVFIEKAEGAYI
                     TDSDGKQYIDYVGSWGPMVLGHNHPAIIDAVLKAVPKGLSFGAPTAAEITLAELVCKL
                     VPSIEMVRMVSSGTEATMSAIRLARGYTNRDKIIKFEGCYHGHSDSLLVKAGSGALTL
                     GQPSGPGVPADFAKHTLTCTYNDLDSVKAAFEQYPNEIACLIVEPVAGNMNCIPPQEG
                     FLQGLRDLCTQYGAVFIIDEVMTGFRVALGGAQSYYGVTPDLTTLGKIIGGGMPVGAF
                     GGKKEIMEYIAPTGPVYQAGTLSGNPIAMAAGLACLTELSKAGNETILAEKTKTLAEG
                     FKALADKHNVPLTVQYVGGMFGLFFTEQKAVNNFQEVMKCDAAKFNRFFHLMLEQGVY
                     LAPSAFEAGFMSLAHSDEDIARTLEAADKAFAQL"
     gene            15856..16920
                     /gene="wecA"
                     /locus_tag="PXF40_001109"
     CDS             15856..16920
                     /gene="wecA"
                     /locus_tag="PXF40_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HDL5802461.1"
                     /translation="MWLTFLTVFIVSFLALIVMRPVAEFVGLVDKPNFRKRHQGLIPL
                     IGGIALFIGNLTFYFMQWQDMRLPELYLTAVTILLIIGVLDDRFDISPLLRAGIQAAL
                     AGAMIYSGLSLSSLGQIIAPFSIELGWLGIVFTVFITIGVINAFNMVDGIDGLLAGLS
                     SVSFAGLGTLMFINGEPSLGYWCFALIFVLLPYAMFNLSLFGAKWKVFMGDSGSMLIG
                     FTIIWILLLSTQGQGSPISPITGLWLIAVPLIDMVAVIIRRLKKGKSPFKPDRLHLHH
                     LMMRAGLTSRQALLVITLWAGFCSTIGVLGEVYYWNQWVMMLMFIGLFFLYAYSITHA
                     WRVTRFVRRLKRRAKRSKQL"
     gene            16931..17743
                     /locus_tag="PXF40_001110"
                     /pseudo
     CDS             16931..17743
                     /locus_tag="PXF40_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248465.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LPS chain length-determining protein"
     gene            17784..19031
                     /gene="wecC"
                     /locus_tag="PXF40_001111"
     CDS             17784..19031
                     /gene="wecC"
                     /locus_tag="PXF40_001111"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5802462.1"
                     /translation="MMSKTEFNTICILGLGYIGLPTSVVFANAGKQVIGVDINPQVVA
                     SLNQGNIHIIEPDLQTAFTQAVKKGNFFATAKPQPADAFIIAVPTPLCGKQPDLTYIQ
                     NAAAMIAPCLRKGNLVVLESTSPVGTTENLAEWLSQARPDLAFPADVSIAYCPERVLP
                     GNIMTELVENDRIIGGLSEQCSQQAVDLYQIFAKGRCVTTTARTAEMCKLVENSFRDV
                     NIAFANEISMICDALKINVWELIELANLHPRVNILQPGAGVGGHCLAVDPWFIVSTSP
                     QQARLIRTAREVNDSKPQWVIEQVKTSVADCAMEQDCKPSELTIACLGLAFKPNIDDL
                     RESPALAITRQLAAWHQGSLLAVEPNIQQLAGEKITLVDLNTALSQADILVLLVDHTS
                     FKQISREQIRQRHIIDCRGVWVR"
     gene            19028..19672
                     /gene="rffC"
                     /locus_tag="PXF40_001112"
                     /gene_synonym="wecD"
     CDS             19028..19672
                     /gene="rffC"
                     /locus_tag="PXF40_001112"
                     /gene_synonym="wecD"
                     /EC_number="2.3.1.210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxy-D-galactose
                     acyltransferase"
                     /protein_id="HDL5802463.1"
                     /translation="MKPDQWLSDFFGREIVQVKVAADDFRQIARLQKQGFVLVEGELE
                     FELALATFSENMTACRPADMADLPDLNLLFGSAFPDSRFRSPYFSREENQRFYRTWIE
                     NAVKGKFDDIGLVQCNADGQIQGAVTVRLLAQQQAKIGLLAVKPDCRQQGIGSELLNA
                     AIAWAKQQNAKKLMITTQLSNQKAIRFYQAFGASIKAVYYWFYPALEKYDDEQS"
     gene            19659..20802
                     /gene="rffA"
                     /locus_tag="PXF40_001113"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /pseudo
     CDS             19659..20802
                     /gene="rffA"
                     /locus_tag="PXF40_001113"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251256.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
     gene            complement(20846..22267)
                     /gene="glnA"
                     /locus_tag="PXF40_001114"
     CDS             complement(20846..22267)
                     /gene="glnA"
                     /locus_tag="PXF40_001114"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011298219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HDL5802464.1"
                     /translation="MSNAIANVSKLIQDNDIKFVLLKFTDIKGKEHGVSLPVSLVAND
                     LEDLFEEGKMFDGSSVEGWKAINKADMLLMPIAETAVVDPFARIPTLSIRCSIYDPNT
                     MQSYDRDPRSIATRAENYLKSTGIADSVMFGPEPEFFLFDDVRFSTEMNNVSYRIDDV
                     EAAWNTNRKFEEGNKAYRPLKKGGYCAVAPIDTAHDIRSEMCLLMEEMGLVIEAHHHE
                     VATAGQNEIATRFNSLTLKADETQIYKYIVQNVAVEHGKTACFMPKPFAGDNGSGMHC
                     NMSLSKDGKNVFMGDKYAGLSETALYYIGGIIKHAKALNAFTNPTTNSYKRLVPGFEA
                     PVLLAYSASNRSASIRIPAVTSPKATRVEARFPDPMANPYLCFAALLMAGLDGVINKI
                     HPGDAMDKNLYDLPPEELKDIPTVASSLESALDALSNDFEFLTQGGVFTKDFIDAYIG
                     IRRKEVERVNMTPHPVEFELYYS"
     gene            22454..23524
                     /locus_tag="PXF40_001115"
     CDS             22454..23524
                     /locus_tag="PXF40_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HDL5802465.1"
                     /translation="MLPIYHILGSEIEHHNQQVLTFFQQELLPLLPDSEHFFYVVGKP
                     SLQTAFPHLRIKQFSSQKAIANALIAKKRQNPTACFLLHGQFNPWIWLAIALGRLPTT
                     NLIWHIWGADLYEMATSWKFKLFYPFRRVAQQKILQVWATRGDLDHLWRNMRTRSEQD
                     HLIYFPTKLGDQIKISPTQNDRLTILLGNSGDPANELIQALSEIHQRLGNNVRIIIPM
                     GYPENNESYIRQVEAYSKRLFLAENLQILRKKLSFEEYVTLLSHCDLGYFNFKRQQGI
                     GTISLLISHNVPCVLHSANPFGLDLQAEKVPYLLAENLTASQIQTTKQQLKSIDKNRI
                     AFFAPGYTKLWQQRLIELMQNE"
     gene            23517..24788
                     /locus_tag="PXF40_001116"
     CDS             23517..24788
                     /locus_tag="PXF40_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WzyE family oligosaccharide polymerase"
                     /protein_id="HDL5802466.1"
                     /translation="MNNLIPLGGFYLVSVGLFFSLLYQLYQKSGISFHLLFSLLYFVT
                     FYAGFPFSLIMAFGFDYPLPELKTQWQVFTAAGVGYLIYYVVYSRLWSAVSQPTALVA
                     NFQAKTTACILAAVAVVALLYFLYLNGFLLFKLEKYSQLFAKDRVILSALKRFFYFLL
                     PALLIFCFLYKNKTAWWALLIVGGAFGILSYVAVGGTWANLALAVGFFLLIGLQQGYL
                     SLSKVIAVSLIGVVAMFFLALARYKLTLSGSEMIYTFLYLSRDTFSPWENLARVFSNE
                     VEYQGLMPIVRDFYVYIPQSLWQERPEIVWNTANYFTKVILGNQSGLAISPTLLGSFY
                     IMGGFSVMALGMGIVAAMIKALDNLFAYAKACNSALLQAYCFGNLFNLIVLVREGIDA
                     FVSRFCFFTLIFMACYLLAKILSMGKNNNVR"
     gene            24778..25500
                     /gene="rffM"
                     /locus_tag="PXF40_001117"
     CDS             24778..25500
                     /gene="rffM"
                     /locus_tag="PXF40_001117"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HDL5802467.1"
                     /translation="MFDKVIIRGIALQAVKNREIFANWLMNEKRIQFGRLVAINAEKV
                     ILSEKNPLLRRVIDEAEFNYADGISVVQSIRKKYPNYKIERIAGADLWETLMQRAGAL
                     NVPVFLVGSSADTLTKVEAKLAQWKVNIVGRQNGYFKAEQEQDVIEQIKASGAKFISV
                     AMGTPKQELFIQQLQQQYPQALYMGVGGTYDVFAGKVKRAPKIWQNLGLEWLYRLLKQ
                     PTRWQRQLNLLKYAYYYLTNQL"
     gene            25659..25735
                     /locus_tag="PXF40_001118"
     tRNA            25659..25735
                     /locus_tag="PXF40_001118"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25693..25695,aa:Arg,seq:ccg)
     gene            25765..25840
                     /locus_tag="PXF40_001119"
     tRNA            25765..25840
                     /locus_tag="PXF40_001119"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25798..25800,aa:His,seq:gtg)
     gene            25865..25941
                     /locus_tag="PXF40_001120"
     tRNA            25865..25941
                     /locus_tag="PXF40_001120"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:25899..25901,aa:Pro,seq:tgg)
BASE COUNT         7546 a         5023 c         5899 g         7478 t
ORIGIN      
        1 taacagttat ttttataagg aaaaattatg ttaaaaacca aattatcatt atttactctt
       61 attgttggca cactttttag tacaaatgtg atggcagaag aaaaagcaga tcctaaattt
      121 gtggatgatt cctcttatgc cgtgggtgta ttaatgggta aaaatattaa tggtgtgatt
      181 gagtcacaaa aggatatttt tacctataac caggataaaa tcttagccgg tgttcaggac
      241 accttaaaga aaaccggtaa attaaccgat gaagatttgc aaaagcagtt aaaatcgtta
      301 gatgcctatt tatctgcgaa agaagcaaag attaacgaag aaaaaaccaa agcaacggta
      361 gctgcaggcg ataaattccg tgctgattat aaaaaacagt ctggcgtaaa agaaacggct
      421 tcaggcctgt tatataaaat tgaaaaagca ggtgaaggca attcaccaaa agcggaagat
      481 actgtgaagg tgcattacaa aggcactttg actgatggca cggtatttga cagctcttac
      541 gaccgtggtg agccgattga atttcagtta aatcaattaa ttccgggttg gattgaagcg
      601 attcctatgt tgaaaaaagg cggtaagatg gaaattgtag tgccacctgc attagcttat
      661 ggtgatcgtg ccgcaggcaa aattccagca aattcaacct tgaaatttga aattgaatta
      721 ttagatttta aagcagcaga tgctaagaaa taattcgtta ttccttaatt attgaagata
      781 cgtaagcggt tagatttatt ataatatttg caaaaaatgt gataaaacta accgcttgta
      841 atttgtatta tgaccaaaaa atttacgcct ttttctgacg aagatcacgc cattcttgct
      901 tcttactttc cgatggtaga tgggattgcg gcactgattg gtgagcattg cgaaattgta
      961 ttgcattcgt tagagtttct ggaacattcg gcaatttata ttgctaacgg acacaatact
     1021 aaccgtaaaa tcggctctcc gattactgac cgtgcattga aatcgctgca tcatatggca
     1081 acggatagcg tctccaaacc ttattttacc aaggcaaaag gtggcgtttt aatgaagtct
     1141 atcactattg cgattcgtaa tggtaaacag cacgttatcg ggttactgtg cattaatatt
     1201 aatttggaag tgcctacctc acagtttctc aattctttta ttgcccctgt agataccgct
     1261 tcagaagtta cttttgccag ttcagtagaa gatttggttt cacaaacgat tcaaacgacc
     1321 attgatgatg tgatggcaga tcgtcaaatt tctaacaata ataaaaatcg tcaaattgtg
     1381 atttcgttat ttgagaaagg gatttttgat attaaagatt ccattaacca agtagcggag
     1441 aagctggata tttcacgcca tactgtgtat ctctatattc gtcaaattaa gcaggacaat
     1501 gattaatgga ttatgtatta gcgataaaat caccggttta tggttcacaa ggggcatttt
     1561 tagcctacca agtggcggaa gaattattaa aagccaatca tacaatttgc caaatattct
     1621 tttttcaaga aggcgtgagc aatgctaatg ccttagtgaa tccagcaagc gatgaagtga
     1681 atttagtcga gatgtggaaa aaattggcta aattgcaccg cttgcctctg catttgtgca
     1741 ttgctgctgc ccagcgtaga ggcgtggtgg atgagcaaat ctcagctaat gcaacacata
     1801 atttagccga aggatttacc ctagccgggt taggcgaatt tagccaagca gtattaaaag
     1861 cggatcgatt actgactttt taagatgaag aaatataaac ttgccttttt atttacccag
     1921 ccaccttttg gttcggcagt tagccgtgag gggctagatg ccttgcttgc agctagtgct
     1981 ttttgtgacg agcaagagat agctatcctc tttatcaatg atggcgtatt taatctcatt
     2041 gccgatcaac agccggaaaa actcttacaa aaagatcata tttccacctt caaattattg
     2101 gagttgtatg acttaactga atgttttatt tgccaagaaa gtgtaagttt acgagggctg
     2161 gataatgcag attggttact gcgaatgctt caatttaaaa ctcacgctga gatgatcgca
     2221 ttgctcaatc aagctgaaaa agtaatgacg ttttaaggaa tatttatgct ttataccctt
     2281 tccaaagcga attatgatga agaaacctta aacttctttt tctcacatct tagtgagaac
     2341 gatgcggttg ttctgtggca agatggcgtg ctacaagcgg tcaaaagtcc gcaatttttt
     2401 gcaaaattgc cccgttgcta tttattggca caagatgtgc aagctcgagg attgcaagag
     2461 aagctcactg catttcagtg catttcatta tccgaattag tcaaattaac agcggtttat
     2521 tttccccagg ttgcactgta acctagagag gatatttttt gtaataccaa ataatttaga
     2581 ttatgatgtg attcctaaaa aggagaatat tatgaaaaca aaatgtctta ttccgctact
     2641 agcacttaca cctgttatgg tgatggcaga agaaaataac acttgggtag acaagaaaca
     2701 tgaaacagta agcactacct tagatcgttg ggcaaacaat attaacagtt ggctaggtga
     2761 tgcagaccca gataaaccgg gaacggcttc tttacgggta atgttagata gccgttggga
     2821 taaacacgat aaatttactt ataagccccg tgttcgtggt aaaatcaaac tccctatctt
     2881 gaaaaagcat ctaaatgtcg tatttggtga tgacgaactg gataatgagc ttaccgataa
     2941 aaatcatgct ggaaaattgt ataaaaacgt caatccaaat aaacgctata actctcgtga
     3001 agcgagagat tcgaactctt ctatcggttt acgttggtct gatggcatta aggctttagg
     3061 gattgagacc gatttagatg ctggtattcg ttcgggaagc gatattttcg ggcgtttacg
     3121 catcagtaaa gattggaaaa tcaccgacca gttcagtacc cgcctagagc aaatttatcg
     3181 ttacggttca gagagcaagc actatttacg tactaacttt gaaaataaat ataccgaaac
     3241 ggataccacc tttattatga accacaccaa ttttgaatat cgtcatgatg tagatgaaga
     3301 aagaagttgg gggaatagtt tatatcgtca acataacttc aaaccactca cgcacatcag
     3361 ctatggtatc agtatggggg ggcgtttaga taaagagtta tcaaaattta actattgggg
     3421 tccatttgtc tcctatcgtc aaccaatctg gcgcaactgg ctctttatcc agcctgaaat
     3481 cagtttttat aacgacaaag ataaagatcg taagcacttt attcagacat ttgtacgttt
     3541 agaggctatc ttctagctat taagcctcaa gtagaatctt ggggcttgtt tttgcaagcg
     3601 gtcaatttct tgccaaaatt tacaaaatcc gctataattc ctaaccattt ttagcaaaaa
     3661 ttggctgacg gcttgaccgg tcagcctttt gtgcttgaac gcaagggctg attttgtcat
     3721 tttaatcagc aaaatttgca aatttcctgc ccaatttgac cgcttgcagt agcgatttct
     3781 gactgcttga ttggcgattg gaaaatgaca tctcgtacag tttttataat gccacttcca
     3841 accgagtctt tcgtgtcgga ttgtgtaatc tcaaccaaaa tatatttcag aggctatctt
     3901 aaaaaatggc atattcatat tccgagaaaa agcgtatccg taagagcttt ggcaaacgcc
     3961 cacaagttct gaacgtacct tatctattaa caattcagct tgattctttt gaaaaattta
     4021 tcgaaaaaga tcctgaaggg cagcaaggtt tagaagcggc attccgttct gttttcccga
     4081 ttgtgagcaa caatggtgca acagaattac aatacgtttc ttacgaatta ggcgagccgg
     4141 tgtttgacgt gcgtgagtgc caaattcgtg gtacaaccta cgctgcacca ttacgcgtga
     4201 aattgcgttt agtctcttac gatcgtgaag ccgcagccgg tacggtaaaa gacattaaag
     4261 agcaaaacgt gtatatgggc gaaatcccat taatgaccga taacggtact ttcgtgatta
     4321 acggcaccga gcgtgttatc gtttctcaat tacaccgtag cccaggtgtg ttcttcgatt
     4381 ctgacaaagg taaaacccac tcttcgggta aagtgcttta taacgcacgc attatccctt
     4441 accgtggttc ttggttagat ttcgagtttg atccgaaaga taacttattt gcccgtatcg
     4501 accgccgtcg taaattgccg gcaaccatta ttctacgtgc attaggctac accaccgaag
     4561 aaatcttaaa tttattcttc gagaaaatta aatttgaaat tgccgataat aaattattga
     4621 tgacgttagt gcctgagcgt ttaagaggcg agactgcatc atttgatatt gcagcaaacg
     4681 gcaaagtata tgttgaaatg ggtcgccgta ttaccgctcg tcatatccgt gcgttagaaa
     4741 aagacaatgt gacccaaatt gaagtgccgg tggaatatat tgtcggcaaa gtagcggctc
     4801 aagattacgt tgatttatct tcaggtgaag tgatttgccc ggcgaatatg gaaatctcga
     4861 tggagatgtt ggcgaattta tcacaagccg gttacaacca gatcgaagta ttatttacca
     4921 acgatttaga ccacggtcca tatatttctg aaaccttacg tgttgatcca acttacgacc
     4981 gtttaagtgc gttggttgaa atctatcgta tgatgcgtcc gggcgaacca ccaacgaaag
     5041 aagcggcaga agcattattc gataatatgt tcttctcggc agagcgttat gatttatcgg
     5101 cagtaggtcg tatgaaattc aatcgctcgt tagaaattcc ggaaggcgta ggcagcggta
     5161 ttttaagcaa cgatgacatc atcggtgtga tgaaaaaatt aatcgaaatc cgtaacggtc
     5221 gtggtgaagt ggatgatatc gaccacttag gtaaccgtcg tatccgcagc gttggtgaaa
     5281 tggcagaaaa ccaattccgc attggtttgg tgcgtgtaga acgtgcggtg cgtgagcgtt
     5341 tatctttagg cgatttagat ggtgtaacac cacaagattt aatcaacgct aaaccgattt
     5401 cagcagcagt gaaagagttc tttggttcat cacaactttc gcaatttatg gaccaaaaca
     5461 acccgctttc agaggtaaca cataaacgcc gtatctcggc attaggcccg ggtggtttaa
     5521 cccgtgagcg tgccggcttt gaagtgcgtg acgtacaccc gactcactat ggtcgtttat
     5581 gtccaatcga aactcctgaa ggcccgaata tcggtttgat caactcacta tcggtgtatg
     5641 ctcgtactaa taactacggt ttcttagaga ctccattccg taaagtggtg aatggtcaag
     5701 taaccgaaga gatcgagtat ttatctgcga ttgaagaaag caacaatatc attgcacagg
     5761 cgaactcaaa cttagatgag aacttccgtt ttaccgatac ttatgtaact tgccgtcagc
     5821 aaggcgaatc gggcttattc aaaccggaag aagttcaata tatggacatc tcaacccaac
     5881 aagtggtttc tgtggctgcg gcgttaattc cgttccttga gcacgacgat gcgaaccgtg
     5941 cgttaatggg tgcgaacatg caacgtcagg cagttccaac cttgcgtgcg gacaaaccat
     6001 tagtcggtac cggtatggaa aaaccaattg ctcttgactc aggtgtagcg attgtcgcaa
     6061 aacgtggtgg tacggtgcag tatgttgatg cgtcacgcat tgtagtgaaa gtaaatgaag
     6121 atgaaaccat tccgggcgaa gcgggtatcg atatttataa cttaatcaaa tacacccgtt
     6181 caaaccaaaa cacctgtatc aaccaagtac cttgtgtgaa cttgggtgag ccggttgctc
     6241 gtggtgaaat cttagcggac ggtccttcaa cagacttagg tgaattggca ttaggtcaaa
     6301 atatccgtgt ggcatttatg ccttggaacg gttataactt cgaagactca atgttagttt
     6361 ctgagcgtgt ggtacaagaa gatcgcttta ccactatcca cattcaagaa ttatcttgtg
     6421 tggcgcgtga taccaaatta ggtgcagaag agatcaccgc tgatattcca aacgtgggtg
     6481 aatctgcatt aagcaaatta gatgaatcag gtatcgttta catcggtgca gaagtgaaag
     6541 gtggcgacat cttagtaggt aaagtaactc ctaaaggtga aacccaatta acaccggaag
     6601 aaaaactatt gcgtgcgatc ttcggtgaaa aagcctctga tgtgaaagat tcatcattgc
     6661 gtgttccaaa cggtacttca ggtacggtta tcgatgttca agtatttacc cgtgatggcg
     6721 tagagaaaga taaacgtgcg aaagaaatcg aagagatgca actgtgtgaa gcgaagaaag
     6781 acttagcgga agagttggaa atcttagaag ccggtttatt tactcgtgtt cgcaacctat
     6841 taattgaagg cggcgtaaaa gaatctgcat tagatggcgt tgctcgtgaa aaatggttag
     6901 aacaaaccct tgaagacgaa gcgaagcaaa atcagttaga acagttagcg gaacagcacg
     6961 aagagttacg caaagaattt gaacgtaaac ttgagatcaa acgcaacaaa attatccaag
     7021 gcgacgattt agcaccgggt gtgttaaaag tagtgaaagt ttaccttgcg gtgaaacgcc
     7081 aaatccagcc gggtgataag atggcgggtc gtcacggtaa caaaggggtt atctcgaaaa
     7141 tcaaccctgt ggaagatatg ccatacgatg aaaacggtca gccggttgaa atcgtattga
     7201 acccgctggg cgtaccgtct cgtatgaaca tcggtcagat cttagaaacc cacttaggct
     7261 tagcggctca tggtatcggt gatcagattg ataagatgat caaacagcaa caagaagtgg
     7321 ctaaattacg tgaatatatg caaaaagcct acgatttagg tcacggctca caagtcgttg
     7381 atttaagcac tttctctgat gaagaagtga tgcgtttagc gcaaaactta cgcaaaggct
     7441 taccgcttgc tactccggta ttcgatggtg cacacgaaag cgaaatcaaa ggcttattag
     7501 agttaggcgg cttaccgact tcaggtcaga tcacacttta tgatggtcgt accggtgaga
     7561 aatttgagcg tccggtaacc gttggttata tgtatatgct caaattgaac cacttggttg
     7621 atgataaaat gcacgctcgt tcaaccggtt cttatagcct tgttactcaa caaccattgg
     7681 gtggtaaagc tcaattcggt ggtcagcgtt tcggtgagat ggaggtttgg gcattagaag
     7741 catacggtgc ggcttatact cttcaagaaa tgcttacggt gaaatcggac gatgtgaacg
     7801 gtcgtacgaa gatgtataaa aacattgtag atggtacaca ttatatggag ccgggtatcc
     7861 ctgaatcctt taacgtaatt accaaagaga tccgtgcatt agcaattgat atggagctgg
     7921 acgaagcgta atggtttcac tctccccctt gatgggggag agacaggcaa aggatttgtt
     7981 cagaatcctt tggcagagag agggtgatgc aagcggtgta aatttgctaa atttttgcaa
     8041 aaatcgaccg cttaccctct ccctgatttt gcttctgaac gaggcaaaat ctatccctct
     8101 cccacaaggg gagagggttt aaaatcgcaa ccaaattcgt agagtggata ttctttccac
     8161 caaacaaaac aacctcaaac taggggcaaa aaagtgaaag acttagtgaa gtttttaaaa
     8221 gcacaaacaa aatcgaacga agattttgat gtgattaaaa ttggtttagc atcaccggac
     8281 aagatccgtt cttggtcttt tggtgaagtg aaaaaaccgg aaaccattaa ctatcgtacc
     8341 ttcaaaccgg agcgtgatgg tttattctgt gcacgtattt tcgggccggt aaaagattac
     8401 gagtgcttgt gtgggaaata caaacgttta aaacaccgtg gcgtaatttg tgaaaaatgt
     8461 ggtgttgaag taacccaaac taaagtacgt cgtgagcgta tggggcacat tgaattagct
     8521 tgccctgtcg cacacatctg gttcttaaaa tcactaccgt cccgtatcgg tttaatctta
     8581 gatatgccgt tgcgtgatat tgaacgtgtg ctttattttg aatcttatgt agttactgaa
     8641 ccgggaatga ccgatttaga gaaaaatcag ttattaaccg aagaacaatt tatggacgct
     8701 gaagagcgtt ggggtgatga atttgaagcg aaaatgggtg cagaaggtat ccaagcatta
     8761 cttcgtgatt tagatttaga acaccaatgc gaaaccttgc gtgaagagtt acaagaaacc
     8821 aattcagaaa ccaagcgtaa aaaaatcact aagcgtttaa aaaccttaga agcattctta
     8881 caatccggca acaaaccgga atggatggtg atgacagtat taccggtact tccaccggat
     8941 ttacgtccgt tagtaccgct tgacggtgga cgttttgcga cttctgactt aaacgattta
     9001 taccgccgtg taattaaccg taacaaccgt ttaaaacgct tgttagattt agttgcaccg
     9061 gacatcatcg tgcgtaacga aaaacgtatg ttacaagagt cggttgatgc gttattagac
     9121 aacggtcgcc gtggtcgtgc gattaccggt tcgaacaaac gtccgttaaa atctttggca
     9181 gatatgatca aaggtaaaca aggtcgtttc cgtcaaaact tattaggtaa acgtgtagat
     9241 tactcaggtc gttcggtaat taccgtaggc ccatacttac gcttacacca atgtggttta
     9301 ccgaagaaaa tggcgttgga attattccgt ccgtttatct actcaaaatt agaaaaccgt
     9361 ggcattgctt caactattaa agccgcgaag aaaatggtag agcgtgaaga tcctatcgta
     9421 tgggatattc ttgccgaagt gattcgtgaa cacccgattc tacttaaccg tgcaccaaca
     9481 cttcaccgtt taggtatcca agcgtttgag ccgttattga ttgaaggtaa agcgatccag
     9541 ttacacccac tcgtgtgtgc ggcgttcaat gcggacttcg acggtgacca aatggcggtt
     9601 cacgttccat taacccttga agcacagtta gaagctcgtg cgttaatgat gtcaaccaac
     9661 aacgtacttt caccggcaag tggtgatccg attatcgtac cgtctcagga cgttgtactc
     9721 ggtctttact atatgacccg tgagaaagta aacggtaaag gtgagggaat gtacttcctt
     9781 gaccctcgtg aagcggaaaa agcataccgt accggtcagg ctgaattaca ttctcgtgtt
     9841 aaagtgcgtg ttactgaata tgagaaaaac gaagcaggcg aattagaagc aaaaacttcg
     9901 ttagtagata ccaccattgg tcgttcaatc ttatggatga ttgcaccaaa aggtatgccg
     9961 tttagcttgt tcaaccaaac cttaggcaaa aaagcgatct cgaaattaat taacgagagc
    10021 tatcgccgtt taggtttaaa agaatctgtg gttttagctg accaaattat gtacaccggc
    10081 tttgcttatg ctgctcgttc tggtgcctca gtaggtatcg acgatatggt aattccggag
    10141 caaaaatacg caatcattga agcggctgaa gcggaagtcg ctgagatcca agagcaattc
    10201 aacggcggtt tagtaacagc cggtgagcgt tataacaaag tgatcgatat ttgggctgct
    10261 gcaaacgaac gtgttgcgaa agcaatgatg gaaaaccttt caacggaaga agtaatcaac
    10321 cgtgaaggta atccggaaaa acaagcctca tttaacagta tctttatgat ggcggactcc
    10381 ggtgctcgtg gttctgctgc acagattcgt cagttagcgg gtatgcgtgg cttgatggct
    10441 cgtccggacg gttcgattat cgaaacccca attactgcaa acttccgtga aggtttgaac
    10501 gtattacagt actttatttc aacccacggt gcacgtaaag gtcttgccga tacggcatta
    10561 aaaacagcga actccggtta cttaacccgt cgtttagttg atgtggcaca agatttagtt
    10621 atcattgaag atgactgtgg tacgcacgaa ggtatcgtga tgacaccact tatcgaaggt
    10681 ggtgatgtga aagaagccct gcgtgatcgt gtattaggtc gtgtggtggc agaagatgtg
    10741 ttaaaaccgg gtacagatga agtattaatt ccacgcaaca ccttattaga tgaaaaatgg
    10801 tgtgatgtgg tggatcgtga atctgtggat gtgatcaaag tacgttcggt agtaacttgt
    10861 gatacagact tcggtgtgtg tgctaaatgt tacggacgtg acttggctcg tggtcactta
    10921 atcaaccaag gtgaagcggt cggtgttatt gcggcacaat ctatcggtga gccgggtaca
    10981 cagttaacga tgcgtacgtt ccatatcggt ggtgcggctt ctgcggcagc aaaagaatct
    11041 agcatccaag tgaaaaacgc aggtacgatt aaattaacca acgctaaatt tgtaaccaac
    11101 aaagaaggca aaatcgtatt aacttctcgt aatactgaat taactgtcat cgacaccttc
    11161 ggtcgtacca aagaaaacta taaagtgcct tatggtgcgg tgctttctaa acacgacggt
    11221 gcagaagtgg ctgtgggtga agtggttgcg aactgggatc cgcacacaat gccggtaatc
    11281 tcagaggtat caggtcgtat ccaatttagc gacatcgtag atggcttaac cgttactcgc
    11341 caaaccgatg aattaaccgg tttatcatct atcgtggtgc aagatgtggg tgaacgtgca
    11401 accgcaggta aagatttacg tccggcatta cgcttagttg atagcaacgg caaagacatc
    11461 ttaattccgg gtacagacgt tgcagcacaa tacttcttac cgggtaaagc aatcgtaacc
    11521 ttagacgatg gtgcagaaat tgaagtcggt gaagccttag cccgtattcc acaagaatct
    11581 gtggggacga aagatattac cggtggtctt ccacgcgtag cagacttatt cgaagcccgt
    11641 aaaccgaaag agccggcaat cttggcggaa atttcaggta ttgtgtcgtt cggtaaagaa
    11701 accaaaggta aacgccgctt ggtaattact ccggcggaag gcgaagcgtt tgaagagatg
    11761 attccaaaat ggcgtcagct caacgtattt gaaggcgaga tggtacaacg tggtgatgtg
    11821 atatcagacg gtgcagaaac tccgcacgac atcttacgct tacgtggcgt tcacgccgtt
    11881 accgactaca tcgtaaacga agtgcaagaa gtttaccgct tacaaggggt aaaaattaac
    11941 gacaagcaca tcgaagtgat tgttcgccaa atgttgcgta aagctgtgat caccaacgct
    12001 tacgactctg aattcttaga gggcgaacaa gtggaagtgg ctcgtgtgaa aattgccaac
    12061 cgcaaacgtg ctgaagaagg caaaccgttg gtagaatttg aacgtgaatt gcttggtatt
    12121 accaaagcat ctcttgcaac agaaagcttt atttctgcag cctcgttcca agaaaccact
    12181 cgagtgctta ccgaagccgc agtggcaggt aaacaagatg aattgcgtgg cttaaaagag
    12241 aacgtaatcg ttggtcgctt aatcccggca ggtaccggtt ttgcttacca ccaagcacga
    12301 gctaaaaaac gtgcccaact ggaagcagga attgcagttg tccctgaatt tgaagcaccg
    12361 gcagctaaag ccaattcatt cgttaccgat gcagacatcg aagctgaatt tgaatttgtt
    12421 gcagacgatg caacccaaag tttagcagcg ttgttaaatg cgggtgagga agagtaatag
    12481 ctcgtagggt atgataaatt aaaaaatctc ctagaatata atttctagga ggttttctac
    12541 ttgaatataa gggaaaaata tatagaatgt aagggcttat tcaatttgtg gataaggtaa
    12601 tcaacagtat gtcaatagtt gataacattt cataaagcgt ttcagctact gaacataaac
    12661 taataaagaa tttgataatg attattgtca tattagattc cttgtgagtt ataatagttg
    12721 attgattatt ataatatata tttagcagat agcggtttat tcgacgggta tcctaaggta
    12781 cctaggctat ataaagactg ttaactattc aaatagttag ggacaaccgc aatccttagt
    12841 ctttagtttt gctttcatta aattttctat tatggatata tcttggtata agcctcgtaa
    12901 ttacttacat ttcgattcac ccataactct tcaacaagca attaaattag tcgctaatcc
    12961 aaataatgta gtaaaacata gtttctaccc attcttatct tatacactat ctgtggctaa
    13021 aataaaaaag gataaaaatg aaggtaaatt agtacgttta ataaaaaata gaggaatatc
    13081 ttattcatct cataaagata gccatatttt tagttattat gcatatttat taaatgaaaa
    13141 gtatgaaaat cttttgaaaa ataagtacta tattttagat gattctatat tagcatttag
    13201 aaaactaaat aaaagcaata ttgattttgc cagaatcgct tttgatagta ttcgaagcgc
    13261 tcaaaattgc acggttttag ggctagatat atctaagttc tttgaccata tagaccataa
    13321 aattctgaaa gatatgtggt gtaaagtttt gggtgtacct agtttacctg aagaccatca
    13381 ttctgtattt aaggctatta ctaaattcgt aaaagtagat agagatactg tatttgaatt
    13441 ctttaatatc tcccttcata atcctaggaa aaatgggaag aatagaattt gtagccctcg
    13501 ggaatttcga gaatatagga aattaaagaa acctgactta tttaatgata atccagcttt
    13561 ttttattaat aaaggccaga aagggattcc tcaaggttct ccaataagtg cattgttatc
    13621 caatatctat atgttagagt ttgatgtgtt agttaaagaa aagattatgg agtgcaaagg
    13681 gagttatttt cgttattgtg atgacattct atgtatcatt cctaatgaat acgaagaatt
    13741 tattctcgat tacatcactg gggagataaa aagtaaatta aaactagaga taaataagga
    13801 taaaactgag gttgttaaat tccaatattg taatagaaca aaaaaaataa ttaatgaaaa
    13861 gaagttacaa tatcttggtt ttatattgca taataactct attagtatta gatcatcggc
    13921 atttacacga tattcaaata aaatgaaacg aggggttagt ctagctaagc aaactcaggg
    13981 taaatataat aggataagaa taagacgagg ggtagctatc aaaggcattt ataaaagaaa
    14041 gctattttct aagtattctc atttcggaaa atctaatttt atctcttatg gaaagagagc
    14101 ttattcatct atggattcca aagttataaa gaaccaactt aaacctttat ggtatagatt
    14161 aaagaaagaa atatatttgt aatattagaa agtgtaagac ttgtccttgc ctgcaagtgt
    14221 tggaagccca tatattgctt tatcaatcct attccctcga tagcgcccgt ctccagacgg
    14281 gtgcttgttt aagcataatg aaagtttgta taagcactcg tcagagacga acaccatcat
    14341 aattgctatc gtaagagaaa tttgcactac aagcggtcaa attccctcaa aaacttgcaa
    14401 attattgagt aaacccaacc gcttgtcatt cttctaaagc tgagcaaatg ccttatccgc
    14461 agcctctagc gtacgagcaa tatcttcatc actgtgagct aaagacataa accctgcctc
    14521 gaatgccgat ggggctaaat acacgccttg ttccagcatt aagtggaaga aacggttgaa
    14581 tttggcggca tcacatttca ttacttcttg gaagttgttt actgcttttt gttcggtgaa
    14641 gaataagccg aacattccgc cgacatattg taccgttaat ggcacattgt gcttatctgc
    14701 aagagcttta aagccttcag cgagggtttt ggttttttcc gctaaaatgg tttcatttcc
    14761 tgcttttgat aattcagtta agcatgccaa acctgcagcc attgcaatcg ggttgcctga
    14821 gagcgtgccg gcttggtaaa ccgggccagt tggagcgatg tattccataa tctctttttt
    14881 accaccaaat gcccccaccg gcattccgcc gccgataatt ttgccgagtg tggttaaatc
    14941 cggtgttacc ccatagtaag attgagcccc accgagtgcg acacggaagc cggtcattac
    15001 ttcatcaata ataaataccg caccatattg tgtgcaaaga tcacgtaagc cttgtaaaaa
    15061 gccttcttgt ggcggaatgc agttcatatt gccggcaaca ggctcaacaa ttaaacaagc
    15121 gatctcattt gggtattgct caaatgctgc ttttactgaa tctaaatcat tataggtgca
    15181 agtaagcgta tgcttggcga aatcagcggg tacgcccggg ccgcttggct gaccgagggt
    15241 taaagcacct gaaccggctt ttactaacag agaatcggaa tgcccgtggt agcagccttc
    15301 aaatttgatg attttatctc ggttggtata gccacgagcc aaacgaatgg cagacattgt
    15361 tgcctctgtt ccgctgctca ccattctcac catttcaata gaaggtacta atttgcacac
    15421 taattcggca agtgtgattt ctgctgccgt tggggcaccg aaacttaagc cttttggcac
    15481 ggcttttagc accgcatcaa taatcgccgg gtggttatgc ccgagtacca ttggccccca
    15541 agagccgaca tagtcgatat attgtttgcc gtcgctgtcg gtaatataag caccttcggc
    15601 tttttcaata aaaaccggtg tgccgcccac gcctttaaat gcacgcacag gggagttcac
    15661 accgcccgga atcacttttt gggcttgttc aaacagttgt tctgaaatag acatatcaat
    15721 tcctttcttt tgatgtaaaa atttgcctgt tattgtactg aaaagccctt gttttcgcta
    15781 aaaaatttac gattttgttg ccttatgcta ttctgcattc ctattttatg actcattttt
    15841 tgaggcaatc cctgtatgtg gcttactttt ttaaccgtat ttattgtttc ttttttagcc
    15901 ctgattgtga tgcgtccggt ggcggaattt gttggtttgg tagataagcc caacttccgt
    15961 aaacgccatc aggggttgat tccgttaatc ggtggtattg cattatttat cggcaatctc
    16021 actttctatt ttatgcagtg gcaagatatg cggctgccgg aactgtatct gacagcggta
    16081 actattttgc tgattatcgg cgtgttagat gaccgatttg acatcagccc attactgcgt
    16141 gccgggattc aagcagcact agctggggcg atgatttaca gtggcttgtc gctcagcagt
    16201 ttagggcaaa ttattgcccc ctttagtata gaattaggtt ggctcggcat tgtctttacc
    16261 gtgtttatca ccattggcgt tattaatgcg tttaatatgg tagatgggat tgatggctta
    16321 ttagcagggc tttccagcgt gagttttgcc ggtcttggca ctttaatgtt cattaatggc
    16381 gaaccaagtt tgggctattg gtgctttgcc cttatctttg tgttgttgcc gtatgcaatg
    16441 ttcaatttga gcctgtttgg ggcgaaatgg aaagtgttta tgggcgactc aggcagtatg
    16501 ctgatcggct ttaccattat ttggattctg ctgttaagca cccaagggca aggctcgcca
    16561 attagcccga ttaccggttt gtggctgatt gccgtgccgt taattgatat ggttgcggtg
    16621 attatccgcc gtttgaaaaa aggtaaaagt ccgttcaaac cagaccgctt gcacctacac
    16681 catttaatga tgcgagcagg gcttacctct cgccaagcat tattggtgat taccctctgg
    16741 gcgggatttt gttccaccat tggggtatta ggcgaggtgt attattggaa tcagtgggtg
    16801 atgatgctaa tgtttatcgg gctgtttttc ctatacgcct attccattac ccacgcttgg
    16861 cgtgtaaccc gttttgttcg ccgtctaaaa cgccgtgcaa aacgtagcaa acaactttaa
    16921 aggatatgtt gtgaaaacct tattttatcg acttttagtg ctaattttat ttgctgctat
    16981 cggggcaggt gccggttatg ggctgagtta tactcaacct gaaaaatgga aagtgaccgc
    17041 tcaatttgag caaccgacta ttcccgattt aggtaattat tactcgttac tttccaccta
    17101 ccattttttg aatagtaata gccaagaagc gaatagccaa acggcacagc aacaggcaag
    17161 tgagcaggtt tatgcggaat ttaaacgcaa cctcacgtcc gccgacttgc ttcaagccta
    17221 tttgctacaa acagaagcgg tgaaattaaa agctcaggtt gcaaagaaat caccggcggt
    17281 ggtggcggct gaattagttg aacaattccg ttttgaaaaa gatatggcaa cttcggcaga
    17341 taatgtcagc ttaattgcag aaaatgcgga agaggctcaa aaattattag ccgattttat
    17401 tccgttggta aacacctaag ctcgagataa attaaacgcc gatttaattg cgaaatggaa
    17461 agtcttgttc cagcaaatta aaactgcttc ggagttgaat attaacggta agcaaggctc
    17521 acaagattgg gcagctaaac tgcaaatgat gcgttctgtt cagccgttag acaaccaact
    17581 tacagcttat cgcttggtta aatcgcctag cgttccactt aaatcagaat cgcctgatcc
    17641 gcctattttg gctgatgatt ggggcattaa gtggcttact gctgggcttt atgctcagtt
    17701 ttgcggtgaa agcgaaagct caacctgcgg aactttaatc taaaatggca cacaatttag
    17761 tgtgccattt ctctttgtaa ctgatgatga gtaaaactga atttaacact atttgtattc
    17821 tggggttagg ctatatcggc ttgccgacct cagtcgtttt tgccaatgcc ggcaagcaag
    17881 taattggggt ggatattaat ccgcaagtgg tggcaagcct taatcaaggc aacattcata
    17941 ttatcgagcc ggatttacaa actgccttca cacaagcggt caaaaaaggt aatttttttg
    18001 caactgccaa accgcaaccg gccgatgctt ttatcatcgc cgtgccaacc ccactttgcg
    18061 ggaagcagcc cgatctcact tatattcaaa atgccgccgc tatgattgcc ccttgtttgc
    18121 gtaaagggaa tttggtggtg ctggagtcca cttcgcctgt cggtacaaca gaaaatttag
    18181 ccgaatggct aagccaagct cgccctgatt tagcctttcc agccgatgtg tctattgcct
    18241 actgccctga acgtgttttg ccgggtaata taatgacgga attggttgaa aatgaccgca
    18301 ttatcggcgg attaagcgaa caatgcagtc aacaagcggt cgatttatac caaatttttg
    18361 caaaaggacg ttgtgtcacc accacagctc gcacagcgga gatgtgcaag ttggtggaaa
    18421 acagctttcg tgatgtgaac attgcctttg ccaatgaaat ttcaatgatt tgtgatgcgt
    18481 tgaagatcaa tgtgtgggag ctaattgaat tggcaaatct tcacccgaga gtaaatattc
    18541 tccagcccgg agcaggggtg ggcggacatt gtttggcggt tgacccgtgg tttatcgttt
    18601 ccacatcgcc ccaacaggct cgccttattc gcacggcacg agaagtgaat gacagcaaac
    18661 cgcaatgggt aatcgagcaa gtgaaaacat cggtcgcaga ctgtgcgatg gagcaagatt
    18721 gtaagccaag tgagctaacc atcgcttgtt tagggctagc tttcaagccg aatattgatg
    18781 atttgcggga aagcccggca ttagcgatta cccggcaact tgccgcttgg catcagggta
    18841 gcctgttggc ggttgagcca aatattcaac agctggctgg cgaaaaaatc accttagtcg
    18901 atctcaacac cgcactttcg caggcagaca ttttagtctt gttagtggat cacacttcat
    18961 ttaagcaaat ttcaagggaa cagatcaggc aacggcatat tattgattgt cgaggagtgt
    19021 gggtaagatg aagccggatc aatggctgtc cgattttttc ggtagagaaa ttgtgcaagt
    19081 aaaagtagcg gctgatgatt ttaggcaaat cgctaggttg caaaaacaag gttttgtact
    19141 tgtggaggga gaattggaat ttgagctggc acttgcaaca ttttctgaaa atatgaccgc
    19201 ttgtcgcccg gcggatatgg cagatttgcc cgacttgaac ttattgtttg gttcggcatt
    19261 tcccgatagc cggtttcgtt cgccctattt ttcaagggaa gagaatcaac gcttttaccg
    19321 gacttggatt gaaaatgcgg taaaaggcaa gtttgatgat attggcttgg ttcaatgcaa
    19381 tgctgacggg caaattcaag gggcggtaac ggttcgctta cttgcccaac agcaagcgaa
    19441 aatcggatta ttggcggtaa agcctgattg ccgacaacaa ggtattggct cggaattgtt
    19501 aaatgctgcg atagcgtggg cgaaacagca aaatgcgaaa aaactgatga ttaccactca
    19561 gctgagtaac cagaaagcga ttcgttttta tcaagcgttt ggtgcaagca ttaaggcggt
    19621 gtattattgg ttttaccctg ctttggaaaa atacgatgat gaacaatcct gattttattc
    19681 cgtttaatca acccccggtt gtgggggcgg agcaagccta tatagaacag gcgatggcaa
    19741 cagggcagct ttcgggcggt ggtaaattca cccgcttatg tgagcagtgg cttgaaaacc
    19801 tggcccgtag caaagtgttg cttacccctt cttgcacggc tgcgttagag atggcggcaa
    19861 tactgctgga tattcagccg gacgatgaag tgattatgcc gagctatact tttgtctcta
    19921 ctgcaaatgc gtttgcgttg cgtggggcaa agattgtgtt tgtggatatt cgtccggata
    19981 caatgaatat tgatgaacgc aaaattgagc aagccattac cccaaaaacc aaagtgattg
    20041 tgccggtgca ttatgccggc attgcttgtg atatggattc aataatggca acagccgaaa
    20101 aatacgggct ttatgtggta gaagatgcgg cacaggcagt caattcgttt tataaaggta
    20161 gggcgttagg ttccatcggg catattggtt gctatagttt tcacgaaacc aaaaactata
    20221 ccgctggcgg tgaaggtggg gcgatcgtga ttaatgaggc atttgctgga aaaagcggaa
    20281 atcatcagag agaaaggcac taaccgtagc caattttttc gtggtgaggt agataaatat
    20341 cgctggcagg atattggttc aagtttttta atgtcggaaa ttcaagcggc ttatttgtat
    20401 gctcagctta tagaggcaga taaaatcaac caacagcgtt taaccctttg gcacaattac
    20461 tatcaagcct ttttgccact tgcccaaaca gctaagtgcg agcttcctcg cattggcgaa
    20521 tattgtcgcc ataacgggca tttgttctac ttaaagctaa gtgacttgaa gcagagaact
    20581 gcttttattg attttatgaa ggcacagaat atcttaaccg tgtttcatta tgtgccgttg
    20641 cacagcagtc cggcagggca gaaattaggt cgattagcag gtgatgatcg ctttactacc
    20701 ttagaaagcg aacggttggt aagattgcca ctgttttata atttgagtaa gcaggagcaa
    20761 gagcgtgtta ttcaagcagt gcttgctttc ttcaatcaat aaaaaacggc tgagtgtttc
    20821 agccgttttt tgctatatgt tgttactatg aatagtaaag ttcaaattct accgggtgcg
    20881 gagtcatatt tacacgttcc acctctttgc gacgaatacc gatataagca tcaataaagt
    20941 ctttcgtgaa cacgccacct tgtgttaaga attcaaaatc attgcttaat gcgtcaagag
    21001 cggattctaa agacgaggca accgttggaa tatcttttaa ctcttccggc ggtaaatcgt
    21061 ataagttttt atccattgca tcgcccgggt ggattttgtt gatcacaccg tctaagccag
    21121 ccattaacag ggcggcaaag caaaggtatg ggtttgccat tggatccggg aagcgtgctt
    21181 ctacacgggt cgctttcgga ctggtcacag ccggaatacg gatagaggca gagcggttac
    21241 ttgcagaata tgccaataac accggtgctt caaaacccgg cactaaacgt ttataagagt
    21301 tcgtggttgg gttagtaaag gcatttaatg cttttgcgtg tttaatgata ccgccaatat
    21361 agtagagggc agtttcagat aagccggcgt atttatcgcc cataaacaca tttttgccgt
    21421 ctttgcttaa tgacatatta cagtgcattc ccgagccgtt gtcgccggcg aacggttttg
    21481 gcataaagca agcggttttt ccgtgttcta cggcaacatt ttgcacgatg tatttataga
    21541 tttgggtttc atcggctttt aaggtcaggc tgttgaatcg ggttgcgatc tcattttgtc
    21601 cggctgtcgc aacttcgtgg tggtgagctt caatcactaa acccatctct tccatcaata
    21661 aacacatttc ggagcgaata tcgtgggcgg tatcaatcgg tgcaaccgca cagtagccgc
    21721 cttttttcaa cggacgatag gctttgttgc cttcttcaaa tttacggttg gtattccaag
    21781 ccgcttctac atcgtcaatt cggtatgaca cattgttcat ttcggtgcta aaacgcacat
    21841 catcgaataa gaaaaattca ggctcaggtc caaacattac gctatcggcg ataccggtgg
    21901 atttcaagta gttttcggca cgggttgcaa tagagcgagg gtcacggtca taagactgca
    21961 ttgtgtttgg gtcgtaaatg gaacaacgaa tagaaagggt aggaatacgg gcgaaagggt
    22021 caactacagc ggtttcagca atcggcatta acaacatatc tgctttgtta attgccttcc
    22081 aaccttctac ggacgaaccg tcgaacattt tgccttcctc gaataagtct tccaaatcgt
    22141 tggcaactaa gctgacaggg agcgaaaccc cgtgttcttt acctttaata tcagtaaatt
    22201 ttaataagac aaatttaata tcattgtctt gaatcagttt agatacatta gcgattgcgt
    22261 ttgacatagt aaaataagtc ctcgttggga taaatgaata ataaaaaagc tcggttatca
    22321 tagcattttt taaccaagtg tgtgatgttt tttagtgttt caaagctaaa agaagttgca
    22381 gtaatgttgc aaatttttgc taaaatctta ccgcttgcat attgtttgta tggtggggag
    22441 agaaaagcgt gtaatgttgc cgatttatca tattctaggc tccgagattg agcatcataa
    22501 ccaacaggtt ttaacctttt ttcagcaaga gcttttgccg ttattgccag actccgaaca
    22561 ttttttttat gtggtaggca agccttcact gcaaactgct tttcctcatt tgcggattaa
    22621 gcagttctct tcacaaaaag cgattgcgaa cgccttaatt gcaaaaaaac ggcaaaatcc
    22681 gaccgcttgt tttctgttac acgggcagtt taacccttgg atttggctgg cgatagcctt
    22741 aggcagattg ccgaccacca acctgatttg gcatatttgg ggggcggatt tatatgaaat
    22801 ggcaacttcg tggaaattta agctgtttta cccgtttcgg cgtgttgccc aacaaaaaat
    22861 cttacaggtt tgggcaacaa gaggcgatct ggatcatttg tggcgaaata tgcgtacaag
    22921 atcagaacag gatcatttaa tctatttccc cacgaaatta ggtgatcaaa taaaaattag
    22981 ccccacacaa aatgatcgct tgacgatatt gctcggcaat tcaggcgatc cagcgaatga
    23041 gcttattcaa gccttaagcg agattcatca acgactaggg aacaatgtgc ggattatcat
    23101 accaatgggc tacccggaaa ataatgaaag ctatattcgg caggtggaag cctatagcaa
    23161 gcggttattt ttggcggaaa atttgcaaat tttgcggaag aagctgagct ttgaagagta
    23221 tgttacgtta ttgagccatt gtgatctcgg ctatttcaat tttaaacgcc agcaaggcat
    23281 tggcacgata agccttttga ttagccataa tgtaccttgt gtgttacatt cagccaatcc
    23341 gtttgggttg gatctacagg cagaaaaagt gccttatttg ttggcggaaa atctgactgc
    23401 ttcacagatt caaacaacca aacaacaact aaagagcata gataaaaacc gcattgcgtt
    23461 ttttgctccg ggctacacta aactatggca acagcgatta atcgaattaa tgcaaaatga
    23521 ataatttaat accacttggc ggattttatc ttgtttctgt cgggctattt ttcagcttac
    23581 tttatcaact ttatcagaaa tcggggattt ctttccattt actgtttagt ttgctctatt
    23641 ttgttacttt ttacgccggt tttccgtttt cgttaataat ggcatttggc tttgattacc
    23701 cgctgccgga gctaaaaaca caatggcaag tttttacggc agcaggtgtt ggctatttga
    23761 tttattacgt tgtctattca cgcttgtgga gtgctgtgtc gcaaccaact gctcttgttg
    23821 caaattttca ggcaaaaacg accgcttgta tccttgccgc tgtggcagtt gttgccctgc
    23881 tatatttcct ttatttaaac ggttttctgc ttttcaaact cgaaaaatat agccaactgt
    23941 ttgccaaaga tagggtcata ctttcggcat taaaacgatt tttctacttt ttattgccgg
    24001 cgttgttaat tttttgcttc ctatataaga ataaaacagc gtggtgggcg ttactgattg
    24061 ttggtggggc attcggcata ttaagctatg tggcagtggg cggcacatgg gcaaatttag
    24121 cactagcggt tggctttttc ttattgattg gattgcagca aggctatctg tcgttatcaa
    24181 aggtgattgc cgtaagccta atcggcgtgg tggcgatgtt cttcctcgct ctagcccgtt
    24241 acaaacttac cctttccggt agcgagatga tttacacctt cttatattta agccgagata
    24301 ctttttcgcc ttgggaaaat ttggctcgtg tattttctaa tgaggtggaa tatcaaggtt
    24361 taatgccgat tgtgcgggat ttctatgtat atatcccaca atctttatgg caagaacgcc
    24421 ctgagatcgt ctggaatacg gcgaattatt ttaccaaagt gattttaggc aaccaatcag
    24481 ggttagctat ttcgcctacc ttactcggct ctttctatat tatgggcgga tttagcgtta
    24541 tggcgttggg aatggggata gtagctgcca tgattaaagc cttagataac ctattcgctt
    24601 acgccaaagc gtgcaattcc gccttgttgc aagcctactg cttcggcaat ttattcaatt
    24661 tgatcgtatt agtgcgagag ggaatcgatg catttgtttc ccgtttttgc tttttcacgc
    24721 tgatatttat ggcttgctat ttgctggcga aaatcctttc aatggggaaa aataataatg
    24781 ttcgataaag tgatcattcg gggcattgcg ttacaagcgg tcaaaaatcg ggaaattttt
    24841 gcaaattggc tgatgaatga aaagcggatt cagttcggaa gattagtggc aattaatgct
    24901 gagaaagtga ttctgtcgga aaaaaatccg ttgttacgcc gagtgataga tgaagccgag
    24961 ttcaactatg cagacggcat cagtgttgtt caatcgattc gaaaaaaata tccaaactat
    25021 aaaatagagc gaattgccgg agccgattta tgggaaacct taatgcaaag agccggagcg
    25081 ttaaatgtgc cggtgttttt ggtcggcagc tcggcggata ccctaacgaa ggtggaagca
    25141 aaattggcac aatggaaggt gaatattgtc ggtaggcaga atggctattt taaggcggag
    25201 caagaacagg acgttataga gcaaattaaa gcaagtggcg cgaagtttat tagtgtggca
    25261 atgggaactc caaaacagga actttttatc caacagttac aacaacaata tccacaagcc
    25321 ttatatatgg gtgttggcgg gacttacgat gtgtttgccg gtaaagtgaa acgagcacct
    25381 aaaatttggc aaaatttggg gctggaatgg ctttatcgac tattgaaaca gccaacccgc
    25441 tggcaaagac aattaaattt actaaaatat gcctattact atctgacaaa tcagctctaa
    25501 aaaacgcatt ttttgatatt tattaaacgt tttgaataaa ataaaaccaa acaatacatt
    25561 tttttacatt ttttttaaaa agtgctagac aagggaaagt gaaatctata atatacgcct
    25621 ccgttgcgac gcattaagtt gaattgatgt aaatcgaagc gttcgtagct cagttggata
    25681 gagcgttggc ctccggagcc aaaggtcgca agttcgaatc ttgtcgagcg cgccagatgt
    25741 caatgcggca ctatcaacac aatggtggct atagctcagt tggtagagcc ctggattgtg
    25801 attccagttg tcgtgggttc gaatcccatt agccacccca ttcaatactc ttgtgagtat
    25861 cagacggcga gtagcgcagc ttggtagcgc aactggtttg ggaccagtgg gtcgtaggtt
    25921 caaatcctat ctcgccgacc aattta
//
LOCUS       DANMCL010000030        24125 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.030, whole genome shotgun sequence.
ACCESSION   DANMCL010000030 DANMCL010000000
VERSION     DANMCL010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24125
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.030"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..2169
                     /locus_tag="PXF40_001121"
     CDS             <1..2169
                     /locus_tag="PXF40_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802468.1"
                     /translation="VGYDKGVWEALSVLLPERFDFEVFEVIDYSKEWSWFEIIVENLF
                     WRQPEKINMQKLHQFFKNSPYFNQATWINILYQLATEINHPLNIKYLHNKLYSFSLAD
                     RDEIWTAFIALESDQCPAIERLLTWCQKSSGQENIEPEALLLGAIAVSWLFTSTDKRS
                     RNGYINALAHLLWNRLEIALALFKEFIEVNDPYVMEGILSAIHGAVAYSENSSGLKAL
                     ALEIDNQIFNQPETEEIYPNVLVRDYARHIIEYSLQKDEYSSDDIEIIRERITPPYRS
                     SFPQNLPTNEEIDKKYHSDGQRIIIRSMTTEYGRGMCGYGDFGRYTFEAKFRNWESYK
                     FGNLINVDLLSNYACQMIFEQFGYDDKKHLEFDKETRSRYWRRDDTNKIERIGKKYQW
                     LALYEILARVMDNFPTFSNRYADEIGLEYITNLDNFYLPKTQIKIVPPTKTDVFFQYI
                     NQKQCKTKHYFTIQNDELIDDWVKINDFPDVSNLLEVTINDEQWLVLERHDDFRELAK
                     FGQKETYDRQMWLQIRSYLVKESQFSKAKNWLAQQDFMERWMPEGNEHYGMNIHQFFA
                     ENTLNEWQEIYRHRENKSPSFKVIPSVDSHTWESTYGNDGISFYAPIPMLYHGMKMKN
                     AIKDGYWVDLQNNLVCFNPEINEKFQNSLLVKKDKFLDFLKEHKLKLVWTVLGEKHAY
                     KESKFLQELSGVYYLYGKNQQVQGSIKHFIQEIEHWGEKQ"
     gene            2166..2876
                     /locus_tag="PXF40_001122"
     CDS             2166..2876
                     /locus_tag="PXF40_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802469.1"
                     /translation="MNLNTLRLFVAVIQHGSLSKASERLNVPIATISRQIADLEKELN
                     IQLFDRQKSGVKPTMAGQRLYEQVHLSIEQLATAKEVLFEEQGNLKGKLRLSASPACE
                     PVLAWIADFQAAYPQVQVHCTLTDRLLDLSADGIDVAFRIGQLHGEQFIAKKVGQIGS
                     KWVAHPKFLARFGTPSTVKDLKNFPIAAWAKNEASVITLGTGRQAVEIPYLFSSNDSY
                     AIEYMAKSSGSACRQHGG"
     gene            2845..3027
                     /locus_tag="PXF40_001123"
     CDS             2845..3027
                     /locus_tag="PXF40_001123"
                     /inference="COORDINATES: protein motif:HMM:NF015431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802470.1"
                     /translation="MALLADSTVDRLVAENGLVEVLGETENPKFDLTMIYAAHRYPSS
                     IVRAFVGFVLEQVKAN"
     gene            complement(3101..3550)
                     /gene="nrdR"
                     /locus_tag="PXF40_001124"
     CDS             complement(3101..3550)
                     /gene="nrdR"
                     /locus_tag="PXF40_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HDL5802471.1"
                     /translation="MRCPFCSTEETKVIDSRLAASGYQIRRRRECISCKERFTTFESA
                     ELVVPYVIKNNGSREPFDAEKLRTGLRRALNKRPVSADDVEKAISQIIIQLQAMGERE
                     VPSRHIGTLAMNALKQLDKVAYIRFASIYLSFSDIEEFIKEIEKLKE"
     gene            complement(3550..3855)
                     /locus_tag="PXF40_001125"
     CDS             complement(3550..3855)
                     /locus_tag="PXF40_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgL domain-containing protein"
                     /protein_id="HDL5802472.1"
                     /translation="MNTKPTQPITLCAIYRSKAKEGMYLYVPKRDQFEQVPETLRQLF
                     GKPEFVMMFNLTGEKPLVRAKNEEVLQLLIEQGYYLQMPPPPENLHKAFIAQQKGEK"
     gene            complement(3845..5308)
                     /locus_tag="PXF40_001126"
     CDS             complement(3845..5308)
                     /locus_tag="PXF40_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HDL5802473.1"
                     /translation="MAEYSGTTQEKMKDKQVEQINISPHSIEAEQAVLGGIMLSNDHW
                     DNVAERVQPHDFYNYAHRIIFEQMAELVRHNKPIDIITLDQALKDKGVLQDVGGFAYL
                     AELSKNTPSAANILAYADIVRDRSDLRSVISAGNQIAEMGYKTKGRNSKEVLDEAERI
                     VFEIAEKRNNANEGPQRIDDILLKTLARMDTLSKNRHNGGVTGVSTGFVDLNKKTAGL
                     QPSDLIIVAARPSMGKTTFAMNLCENASLVDIEDKDDLDEQGNPKKKPAKPVLIFSLE
                     MPADQIMMRMLASLSRVDQTKIRTGQISDDEDTAKISSTMAILQERNNIYIDDSSGLT
                     PTELRSRARRIYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEV
                     PVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNDNSDLKGIAE
                     IIIGKQRNGPIGRVRLTFQGQYSRFDNYTGGHYDDEY"
     gene            5482..6381
                     /locus_tag="PXF40_001127"
     CDS             5482..6381
                     /locus_tag="PXF40_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5802474.1"
                     /translation="MIKKALFALTATAVFAASAFAKDVTIPTARGEVTFKETPSKIAV
                     FDTGSLDTLQALGVKIDGMPEFKVLSYLKPSADKAVNVGTVFEPDLEALNSLNPDLII
                     VGTRTAKKFDEVSQIAKTIDMTDNGDKLIESGLQRLDSFGKLFNKEAETEKLKAEINT
                     LLDQTKAAVKGKGNGLIILVNGGKISAFGSGYRLSWIHDNLGIPMADSSIKNTGHGQP
                     VSFEFIQKLNPDWLFVLDRIAAIGQEGQSAQQVLDNELVRQTKAWKNGNIVYLSAASY
                     LAPGGYEQMKTDLTNIKTAFEKK"
     gene            6475..7443
                     /locus_tag="PXF40_001128"
     CDS             6475..7443
                     /locus_tag="PXF40_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HDL5802475.1"
                     /translation="MFSFFRLNLFLLILLIPISASVGVADFHWSEIFHSSEQSQIFFI
                     SRLPRTLAVILVGATLAVAGMVLQIVLKNRFIEPSMIGTSQSAAIGILLASLLFPTSA
                     LLLKMSIATLSALMGMGLFMLLIRQLPPHQQLMLPLIGIVFGNVIEAISTFIAYETDS
                     LQVLSIWFSGDFSGILAGRYELLWITAILAVVVYVMADQLTIAGLGENISTNLGINYK
                     QMTWLALIVVAMITAIVVVTVGQIPFIGLVVPNIVSRIAGDRLRKNLPAVVVLGANLV
                     LICDILGRAINAPYEVPISTIFGIIGTVIFLYLLLKEKRAEEKARG"
     gene            7496..8372
                     /locus_tag="PXF40_001129"
                     /pseudo
     CDS             7496..8372
                     /locus_tag="PXF40_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
     gene            8392..9150
                     /locus_tag="PXF40_001130"
     CDS             8392..9150
                     /locus_tag="PXF40_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HDL5802476.1"
                     /translation="MITVKNLHHKIGNATILNNINLTIPNGGITALIGANGAGKSTLL
                     SLIARLQPIQQGEIHLNELNIANTASQTIARQLAILTQDNVIHSRITVKDLLLFGRYP
                     HHQGRITSHDNAIVEEALVRFDLSTFSHRFLNELSGGQRQRALIAMTFCQQTDHILLD
                     EPLNNLDMFHARELMKLLRKLTDELALTTIMVVHDINIAAAYADTIIAMKDGGIKMIG
                     TPKEIITTENLKTVFNLDAEVLECQGKPLVIHHI"
     gene            complement(9327..11894)
                     /gene="glnD"
                     /locus_tag="PXF40_001131"
     CDS             complement(9327..11894)
                     /gene="glnD"
                     /locus_tag="PXF40_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HDL5802477.1"
                     /translation="MMKNSNELKTLLSAFTEQQRQAFQSENVLSLLAQRSQFYDQLLQ
                     ALWQDFGLAQYEHITLLAVGGYGREEMFPLSDLDILVLTEKPLEEAIQQRLNELFALL
                     WDSKLQLGTSVRTLEECIQIGKAEISVATNMLEGRFLLGNKSLWLRLKEALYQPDFWD
                     IKAFFRAKMAEKNERYARYHNTSYNLEPDLKHSPGGLRDLHLISWIMLRHYGVSSFVD
                     LLNKGLLYPEEYKELIAAQAVLFRMRFALHLQLKRYDNRLRFDRQLQLSEILGYQGEA
                     NQAVELMMRDYFQATKSISQLSQLLLNSFEQAYVNELQKNAQKQPLDQYFYRQEQQLF
                     VVERKIFKTQPTTMLDLFFHLTNDPTLIANADTLRQLRLCLQQQHEPMCFLPEMREKF
                     VQLFAQPKVISRAIVPMHQLGFLSAYLPQWKGIEGLMQFDLFHIYTVDEHTVRVMLNL
                     ENFSEDPSRAFFPLCHQLFATLSEKPLLYLAALFHDIGKGREGEHAQVGALDMREFAE
                     LHGFSQAQINDMVWLVAEHLTMSITAQRRDIHDPQIISEFAKKVQNQTALSSLLCLTV
                     ADICATSESLWNDWKASLFTQLYQFTLQQLAQNLNYQAVAQEHRLQALELMKFVLSAD
                     ERIALNAFWQPCPERYFLHHTPTQLVWHALHYVKTRRLPMVLISNEYARGGTEIFVCC
                     QDQPQLFARIAQLLSQKRISIHDAQIITTENGVVLDSFIVSERDGDDDLTDERCMQIQ
                     QAMMKMLSLTETGIKFTKKPVKHLSFKRKTRLRFLPPSSKQQTEFELFTLDREGLLAQ
                     IGYIFNRLRLNLINAKITTIGERVEDFFVVSNDQGKALSEQEQLELKAILITELDSE"
     gene            12006..12983
                     /locus_tag="PXF40_001132"
     CDS             12006..12983
                     /locus_tag="PXF40_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HDL5802478.1"
                     /translation="MTLAVAAIIGGLIILVWSADRFVEGAASTARHFGMTPLLIGIVV
                     IGFGTSAPEMLVSASSALSGSPGIALGNAYGSNITNIALILGLTAIIKPLSVNSDVLK
                     KELPILLAVTLLSAYLVYDANVTQLDAIILLAVFFVYMAWTIITAMKSKNDALSLDVD
                     AELTNSAKMGLGKSILWLIIGLVSLVISSQFLVWGAVEVAKFFGVSDLVIGLTIVAVG
                     TSLPELASSIAAARKGEVDLALGNIIGSNLFNTLAVVGIAGAIEPMQVSAEVFSRDVL
                     MMSALTFLLFIFGINLYRRTEGGRINRLEGLLLFAAYVGYNFYLFKTAG"
     gene            complement(13040..14122)
                     /gene="serC"
                     /locus_tag="PXF40_001133"
     CDS             complement(13040..14122)
                     /gene="serC"
                     /locus_tag="PXF40_001133"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HDL5802479.1"
                     /translation="MTEIYNFSAGPAMMPKKVLEKAQQELLNWLDQGTSVMEVSHRGK
                     LFMELAAQSEADLRKLYNVPDNYRILFLQGGARGQFAAIPMNLIGKKGKALYLNSGHW
                     SATAAKEARNFAEIDEINILETEPQLKVSRLDFSDIAEQYDYIHYCTNETISGVEIFD
                     IPNVGNTPLVADMSSNILARGIDINKFGVIYAGAQKNLGPAGITIVIIRDDLIGNARK
                     DTPSIWNYATQRDADSMINTPPTFAWYLCSLVFQHLLAEGGLKATEERNLAKATLLYE
                     YLDSSTFYYNTVAHENRSLMNVTFTTGNDELNAKFVAEATACGLQALKGHKVLGGMRA
                     SIYNAMPIDGVKALIEFMKVFEQRNA"
     gene            14454..15134
                     /locus_tag="PXF40_001134"
     CDS             14454..15134
                     /locus_tag="PXF40_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00153 family protein"
                     /protein_id="HDL5802480.1"
                     /translation="MALNNILGLFAQSPLKPLQKHSNKVTECSELLESFFEATFEHDW
                     EKAAEVRGKIVDLERRADALKREIRLKLPRGLFMPVERGDLLELVTQLDKLANYSRDI
                     SGRIIGRKLIIPTEMQPLFKKFLSRSIDASRQVRKVLDEMDQLLETGFRGRELDFVNK
                     MILELDQIEDDTDQYQITLRHTLLELEKNLNPIDVMFLYKCIERISVLADQAQRIGSR
                     IELMLAKS"
     gene            15146..16414
                     /locus_tag="PXF40_001135"
     CDS             15146..16414
                     /locus_tag="PXF40_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HDL5802481.1"
                     /translation="MELLNQYGSILVIITAIVGFMMAFGIGANDVSNAMGTSVGSGTI
                     TIKQAILIAMVFEFAGAYLAGGEVADTIKSGIIDPAQFANSPDILVLGMMASLCAAGM
                     WLIIATKMGWPVSATHTIIGAVIGFALITIGSDAIQWDALGGIVGSWFVTPILAGIVA
                     YSIFINSQKLIFNRSNPFKQAKKYGPMYMGITIFILVIVTVSKGLKHVGLHLDTAETL
                     GISFALALLAFIIGYFYFRSKSFAMKARAEEKGFAGVEKIFSILMLITACAMAFAHGS
                     NDVANAIGPLAAVESIVRSGGMIEGKTTLAPWILPLGALGMMIGLAIMGKNVMATVGT
                     GITDLTPSRGFAAQFACAVTVVIASGTGLPISTTQTLVGAVLGVGFARGIAALNLGVI
                     RNIVISWVITLPVGAVLSIIIYYILSAIFY"
     gene            16469..17080
                     /locus_tag="PXF40_001136"
     CDS             16469..17080
                     /locus_tag="PXF40_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HDL5802482.1"
                     /translation="MKKLSSALLSCFLLGLSSPALTADTYITENLSTFMRKGAGDQFR
                     ISGAIQAGEKVTVLDRKERYSLIRDSRNREGWVLNSDLSDTASPKELIPQLKQQVQDL
                     TNRLSKIDTEWQQRTAEMQRRTQDSVQKSSDLVEENAQLKRELEILKNKNRDLETMHD
                     SEKREIVIQWFIYGGAVLGAGLLLGLLVPFLIPRRRRNNSGWA"
     gene            complement(17134..18432)
                     /gene="aroA"
                     /locus_tag="PXF40_001137"
     CDS             complement(17134..18432)
                     /gene="aroA"
                     /locus_tag="PXF40_001137"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HDL5802483.1"
                     /translation="MEKLTLTPISRVEGEINLPGSKSLSNRALLLAALATGTTQVTNL
                     LDSDDIRHMLNALKALGVKYELSDDKTVCVVEGIGGAFKVQNGLSLFLGNAGTAMRPL
                     AAALCLKGEEKSQIILTGEPRMKERPIKHLVDALRQVGAEVQYLENEGYPPLAISNSG
                     LQGGKVQIDGSISSQFLTALLMSAPLAEGDMEIEIIGDLVSKPYIDITLSMMNDFGIT
                     VENRDYKTFLVKGKQGYVAPQGNYLVEGDASSASYFLASGAIKGKVKVTGIGKKSIQG
                     DRLFADVLEKMGAKITWGEDFIQAEQSPLKGVDMDMNHIPDAAMTIATTALFAEGETV
                     IRNIYNWRVKETDRLTAMATELRKVGAEVEEGEDFIRIQPLALENFQHAEIETYNDHR
                     MAMCFSLIALSNTEVTILDPNCTAKTFPTYFRELEKLSVR"
     gene            complement(18478..19572)
                     /locus_tag="PXF40_001138"
     CDS             complement(18478..19572)
                     /locus_tag="PXF40_001138"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5802484.1"
                     /translation="MQFINIANEGVKSLSPYQAGKPIEELERELGIQNIIKLASNENP
                     FGFPESAKKAILNQLDDLTRYPDSNGFELKTTIAQKFGVQANQITLGNGSNDLLELFA
                     HTFAGEQDEIIYSQYAFIVYPLVTKAINAVAREILAKNWGHNLDAFLAAITEKTKLIF
                     IANPNNPTGNFLTQAEIEGFLAKVPANVIVVLDEAYTEFTAPQERVDSFGLLAKYPNL
                     IVSRSLSKAYGLAGLRIGYAVSNPEIADLLNRVRQPFNCNSLALASAIAVMNDDEFVK
                     KVAENNRLEMARYEAFCQANGLEYIPSKGNFITIDFKRPAAPIYEALLREGVIVRSIA
                     GYGMPNHLRISIGLPQENERFFTALLKVLA"
     gene            19844..21163
                     /locus_tag="PXF40_001139"
     CDS             19844..21163
                     /locus_tag="PXF40_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HDL5802485.1"
                     /translation="MNHLLYSVEDKPPFGLSLLLASQHLLAALGGIIAVPLVLGNVLK
                     LSTADTIILVNAALLISGIVTIIQCRGIGPIGIRLPSVMGTSFTFVAAALAIGFSESG
                     IAGIMGASLVGSLVMIIGSFFMPYIRKLFPPVVTGTVIMMIGLSLIPVAVDWFAGGQR
                     TDPHYATPENLIMASFVLIIVVALVQWGKGIFSAAAIVIGMMIGYIVSLALGWVSFNG
                     VKEAQLFALPQPLHFGLEFPISGIIGMSIAYLVTIVESSGNFLALGNATKTEITGKHL
                     RGGVLCDGLGSAFAAIMSTTPFSSFSQNIGVISLTGVASRYVVAFTGALLVLAGLFPV
                     FGALIVSIPLPVLGGAGLMMFAMIIAAGIQMLDNIQRSKRNGLIIAISIGCGLAVTTR
                     PELLDKLPHFFKEVFGSGITVGSLLALILNLVLPEDKITKKENKSDE"
     gene            complement(21333..23276)
                     /gene="ftsH"
                     /locus_tag="PXF40_001140"
     CDS             complement(21333..23276)
                     /gene="ftsH"
                     /locus_tag="PXF40_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HDL5802486.1"
                     /translation="MVKNILLWVVIAIVMMTAYEGFNSNFSGSSNTVPYSTFLSDIKE
                     NRLKGVDFKQNDDTILVTKNDGATYQTVMPMYDEYLMADLAKTNAVITGQPAERRGLL
                     SQILISWFPMLLLIGFYVFYMRQMQGGGGRGAMGFGKNKAKMLTADEVKTRFSDVAGC
                     DEAKEEVGEVVEFLRDPTKFQKLGGRIPKGILMVGPPGTGKTLLAKAIAGEARVPFFT
                     MAGSDFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGRKRGGAGFSGGHDERE
                     QTLNQMLVEMDGFEGSEGVIIIAATNRADVLDDALTRPGRFDRQVTVDLPNVKGREQI
                     LKVHLKKVPLAEGVDPMQIARGTPGYSGAQLANLVNEAALFAARKNKRVVMMEDFEEA
                     RDKINMGPERRSNTMTEKEIINTAYHEAGHVIVGYLMPEHDPLNKVTIVPRGQALGFA
                     QFLPEGDRVSETFTKLESQLSTLFAGRIAEGLIFGEDKITTGASSDIHRATQIARAMV
                     TQWGFSKELGPIFYQNEDGMGAIKGVSEESQKLIDVEMRKIIDRNYQRAKQTLEENMD
                     ILHAMKDALLKYETLDSKQIDDLMARRPVGEPSGWTDTPTKDDNATPPSGEQAADVSS
                     TLEDNPNKDNNIGDSLADTKAEH"
     gene            complement(23397..24023)
                     /gene="rlmE"
                     /locus_tag="PXF40_001141"
     CDS             complement(23397..24023)
                     /gene="rlmE"
                     /locus_tag="PXF40_001141"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HDL5802487.1"
                     /translation="MGRKRSASSSRWLAEHFKDQFVQKAHKQKLRSRAYFKLDEIQQT
                     DRLFKPGMTVVDLGAAPGGWSQYVVTQIGSKGRVIACDILDMNPIVGVDFLQGDFREE
                     SVLNALLERVGEDKVNVVMSDMAPNFSGMPSVDIPRAMYLVELALDMCRQVLATKGSF
                     VVKVFQGEGFDEYLREIRSLFSVVKVRKPEASRDRSREVYIVATGYKG"
BASE COUNT         6901 a         4882 c         4697 g         7645 t
ORIGIN      
        1 gttggctatg ataagggcgt atgggaagca ttaagtgtat tgttgccaga acgatttgat
       61 tttgaagtat ttgaagtgat tgattattca aaggaatggt cttggtttga gattattgta
      121 gaaaatctct tttggaggca gcctgaaaaa atcaatatgc aaaaactaca tcaatttttc
      181 aaaaatagtc catattttaa tcaagcaact tggattaata ttttatatca actggctacc
      241 gaaattaacc acccattaaa tataaaatat ttacataaca aactttattc tttttctttg
      301 gcagatagag atgagatttg gacagctttt attgctttgg agtctgatca atgcccagca
      361 attgaacgat tactaacttg gtgtcagaaa tcaagtggtc aagaaaatat tgaacccgaa
      421 gcactattat tgggtgcaat tgctgttagt tggctattta cttctaccga taaacgaagt
      481 agaaatggct atattaatgc actggctcat ttattatgga atagattgga aattgcattg
      541 gcgttattca aggaatttat agaggttaat gacccttatg ttatggaagg tattttatct
      601 gccattcacg gagctgttgc ttattctgaa aattcatctg gcttaaaagc acttgcatta
      661 gagatagata atcaaatatt taatcaacct gaaacagaag aaatttatcc caatgttttg
      721 gttcgtgatt atgctcgcca tattattgaa tactctttgc aaaaagatga atattcatca
      781 gatgatattg agataatcag agaaagaatt acgccacctt atagaagttc atttccccaa
      841 aacttaccaa ccaatgaaga aattgataaa aaatatcatt ctgatggaca aagaatcatt
      901 atccgttcaa tgacaactga atatggtcgt ggtatgtgtg gatatggtga ttttggcaga
      961 tatacttttg aagccaaatt ccgaaattgg gagagttata aattcggcaa tctcatcaat
     1021 gttgatttat taagtaatta tgcttgccaa atgatttttg agcaatttgg ctatgatgac
     1081 aagaagcacc ttgagtttga taaagaaact cgttcaagat attggcgaag agatgatact
     1141 aataaaattg agcgaattgg caagaaatat caatggttgg ctttgtatga aatcttggca
     1201 agggtgatgg ataattttcc tactttttct aatcgctatg ccgatgaaat agggcttgaa
     1261 tatattacta atttggacaa cttttatcta cccaaaaccc aaattaaaat tgtaccgcca
     1321 actaaaacag atgtattttt tcaatacata aatcaaaaac aatgtaaaac aaaacactat
     1381 tttaccattc aaaatgatga attaattgat gattgggtaa aaataaatga ttttcctgat
     1441 gttagtaatc ttttggaagt aacgattaat gatgaacagt ggcttgttct agaaagacac
     1501 gatgattttc gtgaattagc aaaatttggg caaaaagaaa cttatgatag gcaaatgtgg
     1561 ttacaaatta gaagttattt agttaaagaa tctcaatttt caaaagcaaa aaattggttg
     1621 gcacaacaag attttatgga aagatggatg ccagaaggta atgaacacta tggaatgaat
     1681 attcatcaat tttttgccga aaatacatta aatgagtggc aagaaattta tcgacatagg
     1741 gaaaataaat cgccttcatt taaggtaata cctagtgtcg attctcacac ttgggaatct
     1801 acttatggca atgacggcat ttcattttat gcgccaattc ctatgcttta tcacggaatg
     1861 aaaatgaaaa atgcgattaa agatggttat tgggttgatt tacaaaataa tttggtttgc
     1921 tttaatccag agataaatga aaaatttcaa aatagcttac tggttaaaaa agacaaattt
     1981 ttggattttt taaaagagca taagttaaag ttagtttgga ctgtgttggg tgaaaaacac
     2041 gcttataaag aaagtaaatt tttacaagaa ctttcaggcg tttattatct atatggtaaa
     2101 aatcaacaag tccaaggcag tattaaacat tttattcaag aaattgaaca ttggggagaa
     2161 aaacaatgaa cctcaacacc ctccgcctct ttgtcgccgt tatccagcac ggcagtctct
     2221 ccaaagcctc cgagcgactc aatgtgccga ttgcaaccat tagccgtcaa attgccgatt
     2281 tggaaaaaga gcttaacatt caactctttg accgccaaaa atcaggcgtt aaacccacaa
     2341 tggcagggca acgcctgtat gaacaggtgc atttgtccat tgaacagctt gccactgcca
     2401 aagaagtgtt gtttgaagag caaggcaatt taaagggtaa attacgcctg tcggcaagcc
     2461 ctgcctgcga gcctgttttg gcgtggatag ctgattttca ggcagcttat ccacaagtac
     2521 aagtgcattg cacgctgacc gaccgtcttt tggatttgtc ggcagatggc attgatgtgg
     2581 cgtttcggat tgggcaacta cacggcgaac agtttatcgc caaaaaagtg gggcaaatcg
     2641 gcagtaaatg ggtggcacac cctaaatttt tggcacgctt tggcacgccc agcaccgtca
     2701 aagatttgaa aaatttcccc attgccgctt gggcaaaaaa tgaagcaagc gtcatcacgc
     2761 taggcactgg cagacaagcg gtagaaattc cctatctttt ttccagcaat gacagctatg
     2821 ccattgaata tatggcaaaa agcagtggct ctgcttgccg acagcacggt ggatagattg
     2881 gtggcagaaa atggcttggt ggaagtcttg ggtgagacag aaaaccccaa atttgatttg
     2941 acgatgattt atgccgccca tcgttatccg tctagcattg tgcgggcgtt tgtagggttt
     3001 gtgttggaac aagtaaaagc taattgagta tttttaaaga aaaatgaccg cttgtggatt
     3061 ttaaactcac aagcggtcat ttttttatgt ttttttgcaa ctactctttt aatttttcaa
     3121 tttctttaat gaactcttca atatcactaa agcttaaata aatagaggca aagcggatat
     3181 atgctacttt gtctaattgt ttaagtgcgt tcattgccaa tgtaccgata tggcgactcg
     3241 gcacttctcg ttcgcccatc gcttgcagct gaataatgat ttggctaatt gctttttcga
     3301 catcatcagc actgacaggg cgtttattta atgcacgtct taaccctgtt cttaattttt
     3361 cggcatcaaa cggctctcgg ctaccattat ttttgatcac ataaggcaca actaattcgg
     3421 ccgattcaaa ggtagtaaaa cgttctttac agcttataca ttcacggcgg cggcgaattt
     3481 gataaccgct tgctgcaagc cgtgaatcga tcactttagt ttcttcagtg gaacaaaatg
     3541 ggcagcgcat tatttttccc ctttctgttg tgcgataaag gctttatgca aattctccgg
     3601 cggaggtggc atttgcaaat agtagccttg ctctataagt aattgtaaca cttcttcgtt
     3661 tttagcacgc accaatggct tttcaccggt taaattaaac atcatcacaa attcaggctt
     3721 accaaataac tggcgtaatg tttccggcac ttgctcaaat tggtcacgct taggcacata
     3781 taaatacatt ccttcttttg ccttactgcg ataaatcgca caaagtgtga ttggctgggt
     3841 tggtttagta ttcatcatca taatgccctc ctgtgtaatt atcaaaacgg gaatactgcc
     3901 cttggaacgt taaacgcacc cgaccaatcg ggccgttacg ttgttttccg ataataattt
     3961 ccgcaatgcc tttcagatcg gaattgtcgt tatagacctc atcacgataa ataaacataa
     4021 ttaagtctgc atcttgctca atagaacctg actcacgcaa atccgagttt accggacgtt
     4081 tatcggcacg ttgttccaaa ctccggttta gctgagaaag agcgactact ggcacttcta
     4141 attctttcgc tagtgccttt aaagaacggg aaatttctgc gatttctaaa gtacgattat
     4201 ctgcaaatcc cggcgctcgc attaattgga gatagtccac cataatcaag cttaatccgc
     4261 cattttcacg ataaatccgt ctcgctcgag aacgtaattc ggtcggtgtt aaaccggagc
     4321 tatcatcaat atagatatta ttacgttctt gtaaaattgc cattgtgctg gagattttag
     4381 cagtgtcttc atcatctgaa atctgaccgg ttcggatctt ggtttgatcg acccgagaaa
     4441 gtgaggcaag catacgcatc ataatttggt ctgccggcat ctccaggctg aaaattagca
     4501 ctggctttgc cggttttttc ttcggattac cctgttcgtc taaatcatct ttatcttcaa
     4561 tatccactaa tgaggcattt tcacataagt tcattgcaaa agtagttttc cccattgaag
     4621 gacgggctgc cacaatgatt aaatccgaag gctgtaaccc tgcggttttt ttattgagat
     4681 caacaaaccc ggtagaaaca ccagtaactc cgccgttatg gcgattttta gatagcgtat
     4741 ccattcgagc gagtgtttta agcaaaatat cgtcaatacg ttgtggacct tcattggcgt
     4801 tattgcgttt ttctgcaatt tcaaacacaa ttcgctctgc ctcgtctaac acttctttgg
     4861 agttacgccc tttcgttttg tagcccattt ccgcaatttg attgccggca ctgattacac
     4921 ttcttaaatc ggaacgatct cgcacaatat ccgcataggc taaaatattt gctgcactcg
     4981 gggtattttt agaaagctcg gctaaatagg caaaacctcc tacatcttgc agcacccctt
     5041 tgtcttttaa ggcttgatcc agcgtaataa tatcaatcgg tttattgtgg cgcaccaact
     5101 ccgccatttg ttcaaaaata attcgatgcg catagttgta aaaatcgtgc ggttgtacac
     5161 gctcagcaac attatcccag tgatcattac tgagcataat gccaccaagc accgcttgct
     5221 ctgcctcaat cgaatgtggt gagatattaa tttgctcaac ctgcttatct ttcatcttct
     5281 cttgggttgt tccgctatat tctgccatat ttttctcttg ctataatgac gtattgatgt
     5341 acatagtgta tcggaatttt aattaaattg aaatttgcaa attttaggca aaattcgccc
     5401 gcttgttatt ttccgcttta cttaaaatca attttcgtta aaatctttga gaattatttt
     5461 caatataaat ggagttatcc aatgattaaa aaagccttgt ttgcattgac cgcaactgct
     5521 gtgtttgctg cttctgcatt tgccaaagat gttactattc caactgcacg tggagaggtt
     5581 actttcaaag aaaccccgtc taaaattgcc gtgtttgaca ccggaagttt ggatacttta
     5641 caagccttag gtgtaaaaat tgacggtatg cctgaattta aggtgctttc ttatcttaaa
     5701 ccgagtgcag acaaagcggt gaatgtcggt acggtatttg agccggattt agaagcgtta
     5761 aattctttaa atccggattt gatcattgtt ggcacacgca cagcaaaaaa atttgatgaa
     5821 gtcagccaaa ttgcgaaaac catcgacatg acggataatg gcgataaatt aatcgaaagc
     5881 ggattacagc gtcttgattc tttcggcaaa ttatttaata aagaagcgga aaccgaaaaa
     5941 ctaaaagcag aaattaatac tttattagac caaaccaaag cagcagtaaa aggtaaaggt
     6001 aacggactga ttattttagt caatggtggc aaaatttctg catttggttc aggttatcgt
     6061 ttaagttgga ttcacgataa tttagggatt ccaatggcag attctagcat taaaaatacc
     6121 ggtcacggtc agcctgtttc gtttgaattt atccaaaaac tcaatccgga ttggttgttt
     6181 gtgttagacc gtattgcggc tatcggacaa gaaggtcaat cagcccaaca agtgttggat
     6241 aatgaattag ttcgtcaaac taaagcttgg aaaaacggta atatcgttta tctaagtgct
     6301 gcctcatatt tagcgccggg tggttatgag cagatgaaaa ccgacctaac taacattaaa
     6361 acagcatttg agaaaaaata attaacctta caagcggtca gatttcctcc tatttttgca
     6421 agtgcctgca tttgtaaaaa agagagagaa tatgaccgct tgctatttat cactatgttc
     6481 tcttttttta gattaaatct atttctttta atattgctca ttccaatcag tgccagtgtg
     6541 ggtgtggcag attttcattg gagtgaaatt tttcattctt ccgaacaaag tcagatcttt
     6601 tttatcagcc gtttaccaag aacgctcgca gtgatattag tcggtgcaac cttagccgtt
     6661 gcaggtatgg tattacaaat tgtgctgaag aaccgcttta ttgagcctag tatgattggc
     6721 actagccaaa gtgcggcaat tggtatttta cttgctagtt tacttttccc aacatcagca
     6781 ttactgttaa aaatgtctat tgccacatta agtgcattaa tgggaatggg gctttttatg
     6841 ttgctcattc gtcaattacc gcctcatcaa caattaatgc tcccattaat cgggatcgtt
     6901 tttggcaatg ttattgaagc tatcagcact tttattgctt atgaaactga cagcctacaa
     6961 gtgctttcga tttggttttc cggcgacttc tccggtattt tggcaggtcg gtatgaactg
     7021 ctctggatta ccgctattct ggctgttgtg gtttatgtga tggcagatca attaaccatt
     7081 gcaggccttg gtgaaaatat tagtaccaac ttaggcatta actacaaaca aatgacttgg
     7141 cttgccttaa ttgtggtggc gatgattacc gctattgtcg tggtgacggt tggacagatt
     7201 ccgtttatcg gcttggtcgt ccctaatatt gtctctcgca tagcaggtga ccgattgcgt
     7261 aaaaatctgc ctgcggtcgt ggtgttaggt gcgaatttag tcctgatttg tgacatttta
     7321 gggcgagcca tcaatgcccc ttatgaagtg ccgatttcta ctatttttgg gattattggg
     7381 acagtgattt tcctctattt attgctcaaa gagaaacggg ctgaggagaa ggctcgtggt
     7441 tagatcacgc tttatcgttt taagcttaat cttattagca agtattctgt tttatatgac
     7501 ctataatgcg aaaggtaatt gggactttat attgcaactg cgtggcaaaa agcttatttt
     7561 gctctgtact attgcttata cgattggtat ttcgaccctg ctattccaaa cactcacaca
     7621 taatcctatt ttaactccaa gtattttggg gttcgattcg ctctacttgc tattgcaaac
     7681 ctcgttagta tttttatttg gcggtttagg ctttactcag ttagacccaa gctataagtt
     7741 tttctttgaa accttgttaa tgctaggggc atcaatatta ctatttagtt cactgaatcg
     7801 aaatcgatcc gatttaaccc gaatgctttt aatcggtgtc atctttggtg tcttatttag
     7861 aagcctaaat aatttgttgc aacgaatgtc gacccaacag agtttgccgt tgctcaaggc
     7921 tcttctttgc ctcatttaac ctgactaccc ccacattact ttggattgga ggctgtatcg
     7981 ctattctctc tgccatttgg gtctggttac aacggcataa attagatatt ttgttacttg
     8041 gcaaagataa ggcaattggg cttgggttag aatatcatca attttcacgt caattactaa
     8101 tctgttgtgg attgttggtg tctgtttcaa ccgcacttgt tggcccgatt ctatttctag
     8161 ggctacttgt ttgtgccatt gttaatgcaa ttagcccgac tgtttgccat agcgtgcgaa
     8221 taccaatgac ttttttaatc tctgccatca ccttaatttt agggcaggca atcttcgagc
     8281 aagtgctgaa aatgcaaggg gttctgagtg tcgttattga atttattggc ggtattgtct
     8341 ttatttatct cattttaaaa cggaaaaaat aaccataaat taaggaagaa aatgataacg
     8401 gttaaaaatc ttcaccacaa aatcgggaat gccacgattc tgaataatat caatttaacc
     8461 attccaaatg gtggtattac cgctttaatc ggagcaaatg gtgcgggcaa atccaccctg
     8521 ctctctttaa ttgcacgctt gcaacctatc caacagggtg aaatccactt aaatgagctg
     8581 aatatagcca acacagcttc tcaaactatc gctcgacaac tggctatctt gacccaagat
     8641 aatgtgattc atagccgtat taccgtcaaa gatctgctgt tatttgggcg ttaccctcat
     8701 catcaaggca gaatcacttc gcacgataat gccattgtag aagaggctct ggtacgattt
     8761 gatttatcga ctttctccca ccgattctta aatgaattat ccggagggca acgccagcgg
     8821 gcattaattg caatgacctt ctgtcagcaa accgatcata tcttattaga tgaaccactg
     8881 aataatttag atatgttcca tgctcgggaa ttaatgaaat tattacgaaa attaaccgat
     8941 gaactcgcct taactactat aatggtggta cacgacatca acattgctgc tgcttacgca
     9001 gatactatta ttgcaatgaa agatggtgga attaagatga tcggcacccc aaaagagatt
     9061 atcaccactg aaaatttaaa aacagtgttt aatcttgatg ccgaagtgtt agaatgccaa
     9121 ggcaaacctt tagttattca tcatatttaa cgtttgaaga tcatggtaat taataaaaat
     9181 tgcgtcttaa tttattaatc taaacgatag aaacttatat ttagtttcta atttcttgaa
     9241 ttctcaacct ctcttaactc gtgatttaat ttacctaaaa cgttgaaaaa tttaccgctt
     9301 gcagtcttca ctccaagcgg ttgttttcat tcactatcta gttcggtaat tagaatggct
     9361 tttagttcta actgttcttg ttccgataaa gcttttcctt gatcattact gaccacaaag
     9421 aaatcctcta ccctttcacc aatagtcgta attttcgcat taattaaatt taatcggagc
     9481 cggttaaaaa tatagcctat ttgtgccaac aacccttctc tatccaaggt aaaaagttca
     9541 aattcggttt gttgctttga tgacggagga agaaaacgca gccgagtttt acgcttaaat
     9601 gacaaatgtt tcaccggttt tttggtaaat tttatgcctg tttcagttaa gcttaacatt
     9661 ttcatcatcg cctgctgaat ttgcatacat ctctcatcgg ttaaatcatc atcaccatca
     9721 cgctcactta caataaagct gtctaacact acaccatttt cagtagtaat aatttgtgca
     9781 tcgtgaatgc taatgcgttt ttggctgagt aattgggcga ttcgagcaaa cagttgaggt
     9841 tgatcttggc aacatacaaa aatttctgta ccaccacggg catattcatt actgattaaa
     9901 accatcggca accggcgagt ttttacataa tgcagagcgt gccataccaa ctgagtcggt
     9961 gtatggtgaa gaaaataacg ctccgggcaa ggttgccaaa atgcgtttaa tgctattcgc
    10021 tcatcagctg aaagcacgaa cttcatcagt tctaatgctt gcaagcgatg ctcttgtgcc
    10081 actgcttgat aattcaaatt ttgagccagt tgctgtagcg taaattgata taattgggta
    10141 aacagcgagg ctttccaatc attccagagg ctctcactgg ttgcacaaat atctgcaacc
    10201 gttaaacaaa gtagtgaaga taaagcggtc tgattttgca ctttttttgc aaattcgctg
    10261 atgatttgcg gatcgtggat atctcgtctt tgtgcggtga tcgacattgt caaatgctct
    10321 gccaccagcc aaaccatatc attgatttgt gcttgagaaa aaccgtgtag ttccgcaaat
    10381 tctcgcatat ccagcgcacc aacttgagcg tgttcgccct ctctaccctt gccaatatcg
    10441 tggaaaagag ccgcaagata gagcaacggt ttctcagaaa gcgttgcaaa tagctgatga
    10501 catagtggga aaaacgcccg acttggatct tcgctaaaat tttctaaatt taacatgact
    10561 ctgaccgtat gctcatcgac tgtataaata tggaataggt cgaattgcat tagcccttcg
    10621 atccccttcc attgcggtag ataagcactt aaaaaaccca gttggtgcat tggaactatt
    10681 gctcggctta tgactttcgg ttgagcaaaa agctgtacga atttctctcg catttcaggc
    10741 aaaaagcaca taggctcgtg ttgttgctgt aaacacagtc tcaactgacg taaggtgtcg
    10801 gcattcgcta ttaacgtagg gtcattagta agatgaaaaa agagatccaa cattgttgtg
    10861 ggttgggttt taaatatttt gcgttcgacc acaaacaatt gctgttcttg ccgataaaaa
    10921 tactgatcaa gcggttgttt ttgtgcattt ttttgcaact cgtttacata ggcttgttca
    10981 aaactgttta acaataattg gctcagttgc gaaatagatt ttgtggcttg aaaataatct
    11041 cgcatcatta attccaccgc ttgatttgct tcgccttggt agcctaatat ttcactcagt
    11101 tgtaattgtc tgtcaaaccg aaggcgatta tcgtaacgtt tcagttgcaa atgaagtgca
    11161 aaacgcatcc gaaaaagtac cgcttgtgct gcgatcagct ccttatattc ttccgggtaa
    11221 agtagccctt tattgaggag atcgacaaaa gaagatacac cataatgccg tagcataatc
    11281 caagagatta aatgcagatc tcgcaatcct cccgggctat gtttgagatc tggctcaagg
    11341 ttatagctag tattatgata acgtgcataa cgctcatttt tttccgccat tttcgctcta
    11401 aaaaacgctt taatatccca gaaatccggc tgataaagtg cttcttttaa tcttagccaa
    11461 agcgatttat tacccaataa aaatcgccct tccaacatat tagtggcaac cgaaatttct
    11521 gctttcccaa tctgaataca ttcttcgagc gtacgcacac tggtgccaag ttgcagtttg
    11581 ctgtcccaaa gcaaggcaaa tagttcgttt aaacgctgct gaatagcctc ttctagcggt
    11641 ttttcagtta acactaagat atccagatcc gaaagcggaa acatctcctc acgtccgtac
    11701 ccccctaccg ctaatagggt aatatgttca tattgagcga gtccaaaatc ttgccaaagt
    11761 gcttgcagta gttggtcata aaattggcta cgttgtgcaa gtaagctgag tacattttcg
    11821 gattgaaatg cttgccgctg ttgctccgta aatgctgata aaagcgtttt taattcgttg
    11881 ctgtttttca tcataatctc ttcctaaact ggcaaaataa taggtcattt attttcgttt
    11941 gcctatattt attttggcta aaatgcttat aatgccttta tgtttttcat ctaaaaggat
    12001 agtttatgac acttgctgtt gccgctatta tcggtggctt aattatatta gtttggagtg
    12061 cggatcgttt tgtggaaggg gcagcctcta cggctcgcca ttttggtatg acaccattgt
    12121 taatcggtat tgtggtcatt ggttttggta catctgcacc ggagatgctc gtatctgcat
    12181 cttctgcatt aagcggatcg ccgggtatcg ctctcggtaa tgcctacggt tctaacatta
    12241 ccaatattgc gctgatttta ggtttaaccg caataattaa accactatca gttaattccg
    12301 atgtgttaaa aaaagagttg ccgattttac tggctgtcac cctgctttct gcttatttgg
    12361 tttatgatgc aaacgtcact caacttgatg cgattatttt acttgctgtg ttttttgtat
    12421 atatggcgtg gacaattatt accgcaatga aaagtaaaaa tgatgcatta agcttagatg
    12481 ttgatgcaga attaaccaat agtgctaaga tgggattagg aaaatccatt ctttggctaa
    12541 ttattggttt agtatcgcta gtaattagtt cccaattctt agtctgggga gcagttgaag
    12601 tggctaaatt ttttggtgtg agtgatttgg taatcgggct tactattgtg gcggtaggca
    12661 cctcactacc tgaattagcc tcttctattg cagctgctcg taaaggagaa gtggatttag
    12721 ctttaggtaa cattatcggt tctaacttat ttaatacgtt agccgtggtg gggattgccg
    12781 gtgctataga accaatgcaa gtttcagcgg aagtgttttc tcgcgatgtc ttgatgatgt
    12841 cggctctcac cttcttatta ttcattttcg ggatcaacct ctatcgtcgg acagaaggtg
    12901 gcagaattaa tcggttagag ggcttattac tctttgccgc ttatgtaggc tataatttct
    12961 atttgtttaa aactgcgggc tagtgccaaa ttcaaagagc cacaaacgtg gctctttaat
    13021 ttatattctt aagcttgaat taagcattac gttgttcaaa taccttcata aattcaatga
    13081 gtgcttttac cccatcaatc ggcattgcgt tataaattga ggcacgcatt ccacctaata
    13141 ctttatggcc tttcaatgcc tgtaaaccac aagcggtcgc ttctgccaca aattttgcat
    13201 ttagctcgtc attacccgtg gtaaaggtta cattcattaa ggaacggttt tcgtgtgcta
    13261 ccgtattgta atagaatgtt gaactatcca aatactcata aagcaatgta gctttagcaa
    13321 gattacgttc ttcagtagct ttcaaaccac cctctgccag taaatgttgg aacactaaag
    13381 aacataaata ccaagcaaaa gttggcgggg tattaatcat cgaatcagca tctcgctgag
    13441 ttgcataatt ccaaatagat ggggtatctt tgcgtgcatt gccaattaaa tcatcacgaa
    13501 taatcacaat cgtaatgcca gcaggcccta gatttttttg cgctccggca taaattactc
    13561 caaatttgtt gatatcaatc cctcgggcta agatattaga cgacatatct gccactaacg
    13621 gggtatttcc gacattcgga atatcgaaaa tttctacccc actgatggtt tcattggtgc
    13681 aataatggat ataatcatat tgctctgcaa tatcgctgaa atctaaacga ctcactttaa
    13741 gttgcggttc agtctctaaa atattgattt catcaatttc cgcaaagtta cgtgcttctt
    13801 ttgctgctgt tgccgaccaa tgccctgaat taaggtaaag cgctttgcct tttttaccga
    13861 ttaaattcat tggaatggct gcaaattgcc cccttgcacc accttgaaga aatagaatac
    13921 gataattgtc cggcacatta tacagcttgc gtaaatctgc ttcagattgt gccgccagct
    13981 ccataaatag ctttccacgg tggctgactt ccatcactga tgtgccttgg tctagccaat
    14041 ttaataattc ttgttgcgct ttttcgagta cttttttcgg catcattgcc gggccggcac
    14101 tgaagttata tatctctgtc atttttcacc tcgtatagta ataatattga ttctattcta
    14161 tctgaaaaaa agcgtaatgg tagaataaaa acagaaaaat tattttagca aacttgcata
    14221 aaatactctt tttaaaagca taatactctt tcgtaacatc acccaaataa ggaataagcg
    14281 atataaaaaa acaagcataa atttcttcca ttttttgcaa aaaaattatt aaaacaaacc
    14341 gcttgtctta aaaacataat ttaatttcgt gatctttact aatacatcaa gtaaaatgcg
    14401 ccggacttta cagtaagaag tcattgtcaa tattatcact atggagatat tttatggcat
    14461 tgaataacat tttaggttta ttcgcccagt ccccacttaa accgttacaa aaacactcaa
    14521 ataaagtgac tgaatgtagc gagttattag aatctttttt tgaagcgact tttgaacatg
    14581 attgggaaaa agcagctgaa gtgcgcggta aaattgttga tttagaacgc cgcgcagatg
    14641 cccttaaacg tgaaatccgc ttaaaactgc ctcgtggttt atttatgcca gttgaacgcg
    14701 gtgatttatt agaactagtc acacaattag ataagttagc aaactattca agagatattt
    14761 ccggtcgcat tattggtcgt aaattaatca ttcctaccga aatgcaacca cttttcaaaa
    14821 aattcctttc tcgtagtatt gatgctagcc gtcaggtacg caaagttttg gatgaaatgg
    14881 atcagttatt agaaactggt tttagagggc gagagcttga tttcgtcaat aaaatgattc
    14941 ttgaacttga ccaaattgaa gatgataccg accaatatca aattacatta cgtcatacac
    15001 ttcttgagtt agaaaaaaac ctgaacccta ttgatgtgat gtttttatac aaatgtattg
    15061 aaagaatcag cgttctagct gaccaagccc agcgaattgg ttctcgtatt gaacttatgc
    15121 tggcgaagtc ataggagaaa attaaatgga attactcaat caatatggct caatactggt
    15181 gattattact gctattgtag ggtttatgat ggctttcggt attggtgcta atgatgtttc
    15241 aaatgccatg ggaacatccg tcggctctgg aacaattacg attaaacaag ctattttaat
    15301 tgctatggta tttgaatttg ctggtgctta tctggcaggc ggtgaagtcg cagatacaat
    15361 taaaagtggc attattgatc cggcacaatt cgccaatagc cctgatatcc tggtacttgg
    15421 aatgatggca tctctctgtg ctgccggaat gtggctaatt attgcaacta aaatgggttg
    15481 gccggtttca gcaactcaca caatcattgg tgccgttatt ggttttgcat taatcactat
    15541 tggttcagat gcaattcaat gggatgcatt aggtggaatt gttgggagtt ggtttgtgac
    15601 ccctattctt gcggggatcg tagcatattc gatctttatt aactcacaaa aactgatctt
    15661 taaccgctca aacccattca aacaagcgaa aaagtatggc ccgatgtaca tgggaattac
    15721 tatttttatt ttagttattg taaccgtgtc aaaaggctta aagcacgtag gattacatct
    15781 agatacagct gaaacattgg gaatttcatt cgcgcttgcc ttacttgctt ttatcattgg
    15841 atatttttat ttccgcagta aaagctttgc aatgaaagct cgtgcagaag agaaaggctt
    15901 cgctggcgtt gagaaaattt ttagtatttt aatgcttatt acggcctgtg ctatggcttt
    15961 tgctcatggc tctaatgatg ttgctaatgc tattgggcct ctagctgctg ttgaatctat
    16021 tgtaagaagt ggtggaatga ttgaaggtaa aacgacttta gccccttgga ttctcccact
    16081 aggcgcctta ggtatgatga ttggtttagc tattatgggc aagaatgtaa tggctacagt
    16141 aggtactggt attaccgacc ttactccaag ccgtggcttt gctgctcaat ttgcctgcgc
    16201 cgtcacggtt gtcattgcat caggtactgg tttaccaata tcaacaaccc aaacgcttgt
    16261 aggagcagta ttaggtgtgg gattcgcccg tggtattgct gcacttaact taggcgttat
    16321 tcgtaatatt gttatatcat gggtaattac cttgcctgta ggtgctgtgc tttcaattat
    16381 tatctattat attttaagcg ctattttcta ttaatttttc aaaaagaata caggcaactg
    16441 tattcttcct agctttagag gaatatatat gaagaaatta tcatcagctc ttctgtcttg
    16501 ttttttactc ggcctatcta gccctgcttt aacggcagac acttacatta ctgaaaatct
    16561 gagtacattt atgcgcaaag gtgctggtga tcaattccgc atttcaggcg ctattcaagc
    16621 aggtgaaaaa gtcacagtat tagatcgtaa agagcgctac agtctgattc gagatagtcg
    16681 taaccgtgaa ggttgggtac ttaattcaga cttaagcgat actgctagtc caaaagagct
    16741 gattcctcaa ttaaaacaac aggttcaaga tttaaccaat cgcctgagca aaatcgatac
    16801 cgaatggcaa caacgtaccg cagaaatgca acgtagaacg caagattcag tgcagaaaag
    16861 cagtgatttg gttgaggaaa atgcacaact aaaacgtgaa ctggaaatcc tgaaaaacaa
    16921 aaatcgtgat ttagaaacaa tgcacgattc cgagaaacgt gaaatcgtga ttcagtggtt
    16981 catctatggt ggtgctgtgt taggcgcagg tttactactt gggttactcg tgcctttcct
    17041 gatccctcgc cgcagacgta acaacagcgg ttgggcttag tctgccacaa taaaacgtaa
    17101 aaaggattca gttttctgaa tcctttttta cttttatctg accgataatt tttccaactc
    17161 cctaaagtaa gtcgggaacg ttttagcggt acaatttgga tctaagatcg tcacttctgt
    17221 attcgataac gcaattaatg aaaaacacat tgccatacgg tgatcgttat aggtttcaat
    17281 ttcagcgtgc tggaagtttt ctaacgcaag cggttgaatc cgaataaaat cttccccttc
    17341 ttctacctct gccccgactt tacgcaattc ggttgccatt gctgtcaagc ggtcggtttc
    17401 ttttacccgc cagttataaa tattgcggat aactgtttct ccttcggcaa ataaagcggt
    17461 tgttgcaatc gtcattgccg catcaggaat atgattcata tccatatcta cgccttttag
    17521 cggggattgc tcggcttgaa taaaatcctc tccccaagtg atttttgccc ccattttttc
    17581 caacacatcg gcaaacaagc ggtcgccttg gatcgatttt ttaccaatgc ccgttacttt
    17641 taccttgcct ttaatcgcac cggaggctaa gaaataagag gcagaagagg catctccctc
    17701 caccaaataa ttaccttgtg gagcaacata gccttgttta cctttaacta aaaaggtttt
    17761 gtaatctcga ttttcaaccg taataccaaa atcgttcatc atcgaaaggg taatatcaat
    17821 ataaggtttt gataccagat caccgataat ctcaatttcc atatcgcctt ccgctaatgg
    17881 ggcagacatc agcaatgcgg ttagaaattg gctggaaatc gagccgtcaa tttgcacttt
    17941 tccgccctgc aaaccgctat tgctaattgc caacggtgga tagccttcat tttctaaata
    18001 ctgtacctct gcccctactt ggcgtaaagc atcgactaag tgtttaatcg ggcgttcttt
    18061 cattcttggt tcaccggtaa gaatgatttg ggatttttcc tcacctttta aacacaatgc
    18121 tgctgcaagt ggtcgcattg ccgtgcctgc attgccgaga aacagtgata agccgttttg
    18181 aaccttaaaa gctccaccaa tcccttcaac tacacagacg gttttatcgt ccgatagctc
    18241 atatttcacg cctaacgctt ttaaggcatt gagcatatgt cgaatatcat cactatctaa
    18301 taaattggtc acttgagtcg taccggtggc taaggcggct aataataagg ctcggttaga
    18361 caggctttta gaaccaggta aattgatctc gccttctact cgggaaatcg gggttaaagt
    18421 tagtttttcc atttttctct ttaaatttgt aaaattttca taaaaggtaa ccgcttgtta
    18481 agctaacact ttcaataagg cagtaaaaaa tctctcgttt tcttgcggta aaccgatact
    18541 aatgcgtaaa tgattcggca ttccataacc tgctatcgag cgaacaatca cgccttcacg
    18601 cagtaatgcc tcataaatcg gagcggcagg acgtttgaaa tcaatagtaa taaaattgcc
    18661 cttagaaggg atatattcca agccgtttgc ttggcagaaa gcctcatagc gagccatttc
    18721 caagcggtta ttttctgcca cttttttgac aaattcatca tcattcatta ccgcaatcgc
    18781 tgaagctaag gcaagactat tgcagttaaa cggctggcga acacgattta ataaatccgc
    18841 aatttcaggg tttgaaaccg cataaccaat ccgaagcccg gctaagccgt aagccttaga
    18901 gagtgaacgt gacacaatta aattcgggta ttttgccaat aagccaaacg aatccacccg
    18961 ttcttgaggc gcagtaaact cggtataagc ttcgtccagc accacgatta catttgccgg
    19021 cactttagct aaaaagccct caatttccgc ttgggttaaa aaattaccgg tcggattatt
    19081 cgggttggca ataaaaatta atttagtttt ttcggtaatt gcagccaaaa aggcatctaa
    19141 attgtgtccc caatttttag ccagaatttc acgggcaacg gcattaatcg ctttcgtcac
    19201 caacggatac acaataaacg catactgaga atagataatt tcatcttgct caccggcgaa
    19261 ggtgtgggca aacagctcta ataaatcgtt tgagccattg cctaaggtga tttgattggc
    19321 ttgtacgcca aatttttggg caatagtggt ttttaattca aagccgtttg aatccggata
    19381 gcgggttaaa tcgtcaagct gattcagaat cgcctttttt gcactttcag gaaaaccaaa
    19441 tgggttttcg ttcgaggcta atttaatgat attttgaatc cctaattcac gctctagctc
    19501 ctcaatcggc tttcctgctt ggtaaggcga aagggatttc acgccctcat ttgcgatgtt
    19561 gataaattgc ataataacct ctgattattc ttataaaata taagttcgga ttgtagtaaa
    19621 gaatgattgc ctttaccagt aaattttttg ttacaactgg aaagaaattg gtacaaacat
    19681 tcggattagc tttgcaaaaa gcgtaaaaaa tcttaccgct tgtcatttat cagttaggga
    19741 aaataaaaaa tcactctctt atataaaaac aattacgcaa acgattgctt attaaaaaaa
    19801 cttcagtata atgccgacat tttttaactc tcgaggaatc actatgaacc atttacttta
    19861 ttctgtcgaa gacaaaccgc ctttcgggct gagcttattg cttgcctcac aacatttatt
    19921 agccgcttta ggtggcatta tcgctgtacc tttagtgcta gggaatgtac tcaaactctc
    19981 tactgcggat actataatct tagttaatgc tgcactttta atttcaggca tcgtcactat
    20041 tattcaatgt cgaggtattg gcccaatcgg gattagacta ccgagtgtaa tgggaactag
    20101 ctttacgttt gttgcagcag cattagcgat tggtttcagt gaaagtggca ttgccggcat
    20161 tatgggagcc tctttagttg gctctctagt gatgattatc ggcagttttt ttatgcctta
    20221 tatccgtaag ctttttccac ccgtggtaac aggtactgtc ataatgatga ttggcctaag
    20281 tttaattcct gttgcagtag actggtttgc tggtggtcag cgtactgatc cacactatgc
    20341 aaccccagaa aatcttataa tggctagttt tgtattaatt attgtcgttg ctttagtaca
    20401 atgggggaaa ggtatttttt cagctgctgc tattgtgatt ggtatgatga taggttatat
    20461 cgtttcgcta gctctgggtt gggtaagttt taatggcgtg aaagaagcac aactttttgc
    20521 gttaccacaa cctctacatt ttggcttaga atttccaatc tccggtatca tcggaatgtc
    20581 aattgcttat ttagttacca ttgtagaatc tagcggaaat ttcttagcac taggcaatgc
    20641 aactaaaact gaaattaccg gaaaacactt acgtggaggt gtattatgtg atggtttagg
    20701 ctcagcattt gcggcaatta tgtccacaac tcccttttct tctttctcac aaaatattgg
    20761 ggtcatttca ttaaccggtg tagccagtcg ctatgttgta gcatttacag gcgcattact
    20821 tgtactagcc ggtttatttc ctgtatttgg agcattaatc gtgtctatcc cgttacctgt
    20881 gcttggcggt gcaggcttaa tgatgtttgc catgattatc gcagccggta tccaaatgtt
    20941 agataatatt caacgtagca aacgaaacgg tttaattatt gctatctcta tcggttgtgg
    21001 gctggccgta acaactcgac ctgagctatt ggataagctt ccacacttct ttaaagaagt
    21061 ttttggctca ggtattacgg tcggctcctt attagcactt attttgaatt tagttttacc
    21121 tgaagataaa ataaccaaga aagaaaataa gagtgatgaa taaatcaccc taaaaaaaca
    21181 aggacagctc acaatacaac tttgatgctg tcctttattc ccatagagag catatttaaa
    21241 tttaggttaa taaaaaaatc tgcactctat attggtgttt acctttagag tacagatttc
    21301 ttcttattct aactttctag caaacaatta gattaatgtt ccgctttggt atcggctaac
    21361 gaatccccaa tgttattatc tttatttgga ttatcctcta aagttgaact tacatccgct
    21421 gcctgttcac cacttggtgg agtggcgtta tcgtctttag ttggggtatc tgtccaacct
    21481 gatggttcac ccaccggacg gcgtgccatt aaatcatcaa tttgcttgct gtctaaggtt
    21541 tcgtatttca ataaggcatc tttcattgcg tgtaagatgt ccatattttc ttccaaagtt
    21601 tgcttcgctc gttgatagtt gcggtcaatg atcttacgca tttccacatc aatcaatttt
    21661 tgcgactctt ccgatacgcc cttaattgca cccattccat cttcattttg atagaaaatc
    21721 gggcctaatt cttttgagaa gccccattga gtaaccattg ctcgtgcaat ttgggttgct
    21781 cgatgaatat cagaggaagc ccctgtggta attttatctt caccaaaaat caagccctca
    21841 gcaattcgcc ctgcaaatag ggtggaaagt tggctttcca atttggtaaa tgtttcgctt
    21901 acacggtcac cttccggtaa gaattgagca aaacctaacg cctgaccacg aggcacaatt
    21961 gtcactttat tcagcggatc gtgttccggc attaaatagc caacaataac gtgtccagct
    22021 tcgtggtaag cagtattgat gatctctttt tccgtcattg tatttgaacg gcgttccggc
    22081 cccatattga ttttgtcacg ggcttcttcg aaatcttcca tcattaccac acgtttattc
    22141 ttacgggcag caaataaggc agcttcgttc accaagtttg ctaattgagc accagagtaa
    22201 cccggcgtac cacgagcaat ttgcatcggg tcaactccct ctgcaagcgg tacttttttc
    22261 aagtgaactt tcaaaatttg ctcacgccct ttcacgttcg gcaaatcgac cgtgacttgg
    22321 cggtcgaaac gccccggacg agttaaggca tcatctaaca catcggcacg gttggttgca
    22381 gcgatgataa tcacaccttc agagccttca aagccgtcca tctcaactaa catttggttg
    22441 agggtttgtt cacgctcatc gtgtccaccg ctgaaacctg caccaccacg tttacgccct
    22501 accgcatcaa tttcatcaat aaaaataata caaggggcat ttttcttggc ttggtcgaat
    22561 aaatcacgca cccgtgaagc acccacacct acaaacattt ccacgaagtc ggaacctgcc
    22621 attgtaaaga atggcactcg tgcttcacct gcaatcgctt tcgccaataa ggttttaccc
    22681 gtacccggag ggcctaccat caagatccct tttggaatgc gcccacctaa tttttgaaat
    22741 ttagttgggt cacgcaaaaa ctcaacaact tcgcctactt cttctttggc ttcatcacag
    22801 ccggctacat cagaaaatct ggtcttaact tcgtctgcgg tcaacatttt ggctttattt
    22861 ttcccaaagc ccattgcacc acgtcctccg ccaccttgca tttgtcgcat ataaaacaca
    22921 tagaaaccga ttaacagcaa cattgggaac caagaaatca aaatttgcga gagcaagcca
    22981 cgacgctcag caggctgacc ggtaatcact gcattggttt ttgctaaatc tgccattaag
    23041 tactcatcat acatcggcat tacggtttgg taggttgcac catcattttt cgtcaccaaa
    23101 atggtgtcat cattctgttt gaaatcgacc ccttttaaac gattttcttt aatatcgctt
    23161 aaaaaagtcg aatatggcac tgtatttgag ctaccactga aattagaatt aaaaccttca
    23221 taggctgtca tcatcacaat ggcaatcacc acccaaagta aaatattttt aaccatatcg
    23281 ttcaaggtta atcccctatc tgctgaataa aaaactgttc aagattacta taaaagcggt
    23341 cgaattttcc aatttttttg caaaatgtta ataaaaaatg accgcttgct tgttttctag
    23401 cctttataac ctgtcgctac aatataaact tctcgagacc gatctcgaga cgcctccggt
    23461 tttctgactt ttaccacact aaagagcgag cggatttctc gaaggtattc atcaaatcct
    23521 tcgccttgga ataccttaac cacaaaactg cctttggttg ctaatacttg gcgacacata
    23581 tccaatgcca attccactaa atacattgca cgaggaatat caaccgacgg cataccgctg
    23641 aaattgggag ccatatccga catcaccaca ttcactttgt cttcgcctac tcgctcaagt
    23701 aacgcattca gcaccgattc ttcacggaag tcgccttgta agaaatccac gcctacaatc
    23761 gggttcatat ctaaaatatc acaagcgatt actctgccct tactgccgat ttgcgtcacc
    23821 acatattgcg accaaccgcc cggtgcggca ccgagatcca ccaccgtcat tcccggtttg
    23881 aataaacggt cggtttgttg aatttcatct aacttaaaat acgcccgtga acgcaatttt
    23941 tgtttatgtg ctttttgcac aaattgatct ttaaaatgtt ctgcaagcca acgtgatgaa
    24001 ctcgcacttc gttttctacc catttgttct tctatcttaa ttaattcaac gatttataat
    24061 aagggttaaa ttagcaaatt caagagatgt tctaaaattt agctcggctt attatgctta
    24121 attaa
//
LOCUS       DANMCL010000031        24082 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.031, whole genome shotgun sequence.
ACCESSION   DANMCL010000031 DANMCL010000000
VERSION     DANMCL010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24082
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.031"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..576
                     /locus_tag="PXF40_001142"
     CDS             <1..576
                     /locus_tag="PXF40_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2572 family protein"
                     /protein_id="HDL5802488.1"
                     /translation="ITHFYREKYLSDQYNFLALYPQDKTQICQKFQKEQISQADLSDK
                     QFRFLQYQFACQFHSLFKDKKPTKEKYIHFTHLADYLDLSNVPNQEIYTIHSLAELPS
                     SSEREPKIVLAKNAINENLPQEFYGIVITDYLFDITGKKMYGTLYSSYDNAREERNLT
                     FKKEVLAELEARYSAWRYLPYSEHLMGAVDD"
     gene            569..862
                     /locus_tag="PXF40_001143"
     CDS             569..862
                     /locus_tag="PXF40_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5374 domain-containing protein"
                     /protein_id="HDL5802489.1"
                     /translation="MIKYKAETALSLLVAITLFAIVVLSFSQWQSAQNHRLNQHFQQQ
                     QAVMILENQLALKLAGLDCESSITQNQIRYQIQCSGNRLTIRFPLGKIELNND"
     gene            911..4201
                     /gene="recC"
                     /locus_tag="PXF40_001144"
     CDS             911..4201
                     /gene="recC"
                     /locus_tag="PXF40_001144"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HDL5802490.1"
                     /translation="MFTLYQSNQISSLAEMLVKIQQVNPLEDPFEPETILIQSQGMAQ
                     WLQMQIAELNGVMGNCDFLYPTTFLWQQYRLLFPELPKENIFERSSLVWRIMRLLPSC
                     LTLSEFAPLKRYLGDQPNKEQYQLKLYQLSAKIAELFDQYLVYRPHWLVSWEEGNLQA
                     IENEIKIATAAKPIDFDLIRADMKWQSHLWQQIVSDLQSESDEQVFTTSHRAYLQQNY
                     FAKLDDLTETEKAKLPKRIFIFGISSFSPLQLAVFKKLSEHCDIHLFFFNPSEKYWGD
                     SVEEKVWQKLALSHKISQDDLDNLLAEQRNKLLNLWGKQGRDFLAQLIEFEPNTMDVF
                     VEPEENSNLNKLKKQIFSLENDATITDLTADNSLQIHSCHSPMREVEVLHNQLLNLFE
                     QDSTLLPKDIIVMSPDINKYAPYIDAVFSRYNTGNRDPRYIPFSLSDQAFTQVDPIIH
                     SFLQLLAMKESPFNAEELFDLLEVNAIQTRFGFSTEDIHTLRVWVRNAGVRSGVEIEQ
                     PHWQNYNSWENGLNRLLLGSSLKEEQGIWENTLAFGDSYGLNAELVGRLASFIEALLA
                     WVNFLQTPQPLAAWQQAIKNLTADLYQENAENAASILLLNNVNDQIIEQISATHFSDD
                     LQIEVLALLFEQQLSQHSQQLNFLVGRVNFATLLPMRAIPFKVICLLGMNEADFPRQQ
                     QINSFDLMQYAPKKGDRAKRDDDRYLFLEALLSAQQMFYISYIGQSQKDGKEMLPSIL
                     VSQLLDAMNEALTPECKQQLSDEVEVLVRKQPLSVFSKKNFTHPRDHAYNAEWIIKPT
                     VAVQDFLSEPLTNESVASLELDELISFVQNPIRFFFLKVLGISFNTYDDTIDESEIFE
                     MSGLDNYRILNELLTINLAQQQRFFAEEQLKGNLPASYFAQIATQDLIGKITEMQAAL
                     SHYLASESRILSVNREVELERQTLTLNGNIANLYQNEVVLWRVGHLRDKDKIQTWIYH
                     LLLCAYFPEKTVKFYYREGEQVGVLSFETVSQIEALSQLSIYLNAYLDGLSQAQLVIY
                     DRIEEYLKGDGTNSEQVLIDLAEKDERDGSYLHRLLAQTKELDSQAIHQRTQSWFSLM
                     NQKIAKGD"
     gene            4337..7282
                     /gene="ptrA"
                     /locus_tag="PXF40_001145"
     CDS             4337..7282
                     /gene="ptrA"
                     /locus_tag="PXF40_001145"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HDL5802491.1"
                     /translation="MKLSFLTQFVAAAFALNVMTYPAFAEVAKNSEKTTASQPQSQLG
                     FELIKQSINKSPNDKAIYQGIKLDNGMEVLLISDSQANKSLMSAIIPIGSMDDPISQQ
                     GLAHYLEHMILMGSKNYPETNSLDGFLTKNGGMNNASTASHRTAYYLQVNNEAFSEAV
                     TRLADTLAFPLLLETNAKKEVNAVNAEMVRAKSHDGHLLHSVNLATANPAHPATKFAV
                     GNKETLSDKPDSKLQTELEQFYKQHYSANLFKVVLYSNQSIEQMAKLAANTLGKMENK
                     HFSIPQTAEPRYRDEDKSVFIQYKPVKSNKMLVIGFDFPNDEMQFKHKTGKYIAYMLN
                     NNTDGTLSDYLIKQGLSDGGIEAVSSANIGRDRGSFDIYIELTDKGLSEQDQIISLVF
                     QQIEKIKQEGIQESYFSEVKESLKQDFQHLQVEKNMDFVEFIADQMLHFPLEHVIDQP
                     YLTETMDNEAIKAKLAAMNIDNARIMLVSDTAKTDKKTPYFEAGYSVAKITQEQKQKW
                     LDFSKNPQLNLPELNPYFTTDFTLNKVETGLTKPKLINDQAGNLIYTMPSVYFTNEPK
                     AKIGVGFNIRPRKDDLKSLTAASILGYMNNLAQTKLDFQSSVAGMNLSLAPAANGLAL
                     SAEGYTQNLAKLMLDSVKQFSRFEFNEDVLAQAKQRLHQELDRNEKENSLNQANAALS
                     RFASYPYFDVPKQREMIDSITLADIEQLRQRILQQSSGFKLLSVGNLSAEQVSALAED
                     LQAVIKNQKSANATGQYVDVSTSQRKINVIKSVPNEDNALLMAFMPNGYNELESLTRA
                     KLLRSIISRWYFDDLRTDKQLGYVVYATDNIIGKTAGIQFMVQSPNTTPAGILEHNER
                     FFTQSFERLKNLSDEEFGKYRDSLVEKLQYKPESLAEEFSEFGSDFSRNNPKFDRLQQ
                     VIELTKALTKADIVAFYQKAVIEKQGFVFVSQAVGTKTKAEDVAKFDGFEQIESIEKL
                     QREFEIKDY"
     gene            complement(7331..8977)
                     /locus_tag="PXF40_001146"
     CDS             complement(7331..8977)
                     /locus_tag="PXF40_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005606119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802492.1"
                     /translation="MKFPTLTKISASVLAVLALAACDDKSNENKPTAAAAKPQTEKTF
                     VNCVSRSPTGFSPILMMDGLSYNASSQQIYNRLVEFVPGTTDIEPALAESWEISEDGL
                     TYTFKLRKGVKFHSNKDFTPSRELNADDVVFSFNRQLDKNHPYHTVSNGTYPYFNAMK
                     FPTLLKSVEKVDDSTVRITLTKRDASFLSSLGMDFTSIYSAEYADKMMKAGIPEAVDT
                     TPIGTGPFVFSGYVLDQASRYVANKEYWKGKPDIDRLIFEIVPDATTRYAKLQSGQCD
                     LMDFPNATDIEKMKNDPKINLLSQPGLNIAYVAFNTEKAPFDNVKVRQALNLAVDKKA
                     IIDVVYQGNGFAAKNPLPPTIWGYNDSLADSEYNVEKAKQLLAEAGFPNGFETELWVQ
                     PVVRASNPNPRRMSEIIQADWEKIGVKAKLVTYEWGDYIKRTKAGELTAGTYGWSGDN
                     GDPDNFLSPLFGTPNIGNSNYARFTNPELDALLEKALGSSDKAERTKLYEQAQVILRE
                     QAPWINVAHSINFAPTSKRVEGYKQSPFGYTYLYPVKIVD"
     gene            9053..11143
                     /locus_tag="PXF40_001147"
     CDS             9053..11143
                     /locus_tag="PXF40_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
                     /protein_id="HDL5802493.1"
                     /translation="MIFANQSIELDTVNVIATRDPSKFADTPQKQTKDALLVKQATSV
                     AAALKALPNVDVQGGARAIVQKPSIRGLSDNRIVQVIDGVRQNFDLAHRGSYFVPMSL
                     IQEIEVIKGPSSSLWGSGALGGVVAMRTPNALDLLKNNDKFGAKIRQGYQTANNLSET
                     EASVFAANDRFDALLSGFYNNADNLRSGEGKELNNTGYKQAGGLVKFGWQINDTHRLE
                     LSHRHSQFKQTAPGNNEVENQFTDNDVSAQISAWHAANPGNPSNPVYLAKMLAFYGQL
                     HSSLGSVSYLSDQKITDKSTSLNYYFNPSNPYLSTQVTLYSNSTTENEHRKISGVEDQ
                     TKLSTRGVNIRNHSELSWFSLVYGVDYMLDKVATQRGRNNTDAQYRANPYDAKSKTTG
                     AYLIAHIPLFDEKVVFSPSVRYDRFDTSSETVKYKDSHWSPAAKLTWKATNWLDLTAK
                     YNEAFRAPSMQERFVSGSHFGTTVRGLPINNIFLTNPNLRPETAKNKEVTFNVHFDNV
                     ISQGDKFNFEATYFRNDVKDLINLQVFKANPTSPMEFIPTRSQYQNIANARLSGIELQ
                     TRYQTERLAVFANYGSTKGKDKDSGEALSNIAASKIGFGVNYAVVQDKFTVGANVTRY
                     QAQHRVPKNHGVTYQGYTLTDLHATYAPLKGEWKNLRLDVAVENLFDKKYQPAFSLME
                     GSGRNVKLSAAYSF"
     gene            11214..12902
                     /locus_tag="PXF40_001148"
     CDS             11214..12902
                     /locus_tag="PXF40_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL5802494.1"
                     /translation="MKFYPSLIASAVSFAVVLSGQAAVNVPDAGSLQRELDQRQAQQK
                     VKPSGEWFNQAAKAPYTATDGQELTFPLTQVQVFDRTNQEISTPELAPILANYVGKAV
                     SLTDLSNLANEITEFYRSHNYLVAKAILPPQEIEQGKVKILLFKGNVGEVRLQNQSAL
                     SDKFVARLANTTVNGSEFILKDELEKFALTMNDVPGVNTGLELSAGKQAGEANLLIKL
                     QNAERFSGYVSADNQGNKNTGRYRLATGIKANNLIGWGDELKVDLMSSNNANLKNARL
                     DYSSLIDGYATRLGLTANYLDYELGGNFKALQSQGHTHNLGAYVLHPTIRLPDFRLNT
                     KVSFNHQRLTDKQQAVNVAQKRQVNSLTVGINGSWNSLKDGTSYFSLSALFGNLANHT
                     NEQAHYVATDFQPKSRFTVYQYSLSHEQALPKSFAFNLGVNGQFADKTLDSSQKMLLG
                     GLYGVRGHQAGVASVDEGHLVQTELKHYLPLFSKSLLTSSVFYDYGWGKYYKHSGFLA
                     RGVNNSVKLQSIGAGLSLSEAGSYAINASVAKPLGKKIENADKHQFWFSAIKTF"
     gene            12914..15730
                     /locus_tag="PXF40_001149"
     CDS             12914..15730
                     /locus_tag="PXF40_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HDL5802495.1"
                     /translation="MFKRNAISLCILTACSGLAYANTADLPQGERVRVGTATIERTTD
                     KMTVNQSSNKVQIDWNSFDIGKNKEVEFKQPTEMAVAYNRVTGGNASQIQGKLTANGK
                     VYLANPNGVLITKDAEVNVGGLLVTTKDLEKISENGTKDKFSRKLAKEGKILNQGKIT
                     AKGERAFVVLVGDDVANEGEINAKNYYHKETKKVTECYDDSWSLVKQCYDFDKEIVKS
                     TSGEVHLSSGENVTFTLSDRYIDVALDDNTVNSIIKNDGAIIANGDITLTAKGRNQAL
                     DSLIINNGVLQANKVQNKNGTIILSAGETQLHEKSQIKGEKVSFAEASYYGPTEDIKV
                     VSKTGSKVTAPVIDFKGKTVNIQGEFGREDSTDLYNDELQILKTTVNIEVPNTEDIRI
                     ADTDNGGSGSFIQAGALASLLANNGRVNVQGKGFDVSGKLNVNAFKQTDSVLKFINQA
                     GINIHNADIHANGRLFFVTNLPNDTDFQSNIRITDSKINLGNGSMGFGRSSKRWEMHD
                     VVRRADTELRKKFNLDMKNVELNQVDDFVVAGGFQQVNLDNVKARGKTNFYLDSGNSR
                     MFVGEQIYEYGVTDIEKRTQLANLDQRRKRWNSDNYDETDLNWEYNQRFDGFAAKHNH
                     RAPIADTEINIANSDISLDNGFVHLMAEKINLDDSKINITFNQDNSLDESTQINRLGL
                     NGKVSMKNSHINVVGDEKDGISPARHYATMFLVGELLGEKSSIFLKSHQGAVLRTDSN
                     VTIAGKNSKDDLKITAITTGKKMGNEIIGPDGLPTSEDNDANASNTAFAIGYEPNATA
                     IVENASITALAPNGGLAYTGTSKTQIDAKDNATFTFFEKPRAGYDKLLGDIKGNPDKL
                     TPRDFARLYDNIKGIKASSLSEQQLGLADTAKKTSEHTLANSLDVENLVSVTVCDEQN
                     KCEERMLGNKNTNAKVIVGDIKFE"
     gene            15853..15984
                     /locus_tag="PXF40_001150"
                     /pseudo
     CDS             15853..15984
                     /locus_tag="PXF40_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(16039..16800)
                     /locus_tag="PXF40_001151"
     CDS             complement(16039..16800)
                     /locus_tag="PXF40_001151"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HDL5802496.1"
                     /translation="MKLNQAQIQNALICGQAVVFDEIDSTNEYLLTHHQRLENGTVCL
                     AEKQTAGRGRRGRTWYSPESENLYFSILWHYPMEQAADLPPLSLVVALIIAESLTVQN
                     VKDIQIKWPNDIYYQGKKMGGILLETQANRNGLDVVIGIGLNLGMAKVDENIVTQAWA
                     DLSQYHFNRNELVCRLAYELQKNLKIYPLVGFAHYAERWQSFDLFRHKAVKLITEAEE
                     IHGISQGINEQGELILKQGDNLRYFGIGEISLRAD"
     gene            complement(16812..17843)
                     /gene="murB"
                     /locus_tag="PXF40_001152"
     CDS             complement(16812..17843)
                     /gene="murB"
                     /locus_tag="PXF40_001152"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HDL5802497.1"
                     /translation="MMKHSLTPFHTFHLPAKATQIIEFTTVEQLLSEWQKAFNAQLPI
                     LILGQGSNVLFLEDFDGVVLVNKLKGITHHEDEHFHYLHVQGGENWHELVKWTLAHNI
                     AGIENLALIPGVASSAPIQNIGAYGVEFEQVCDFVEVLNLRSGELFKLSKSECEFGYR
                     ESVFKHQYRDEFAIISVGLKLAKAWKPVLSYGSLAQLNPETVTPIQIFDEVCAVRSSK
                     LPNPDEFGNAGSFFKNPVISNEQFAPIQAKFPAIPHYPQADGTVKLAAGWLIDQTGLK
                     DLQIGGAAVHTQQALVLINKENATGQDVLALAKTVRQRVKEKFGVEIQPEVRFIGKNG
                     EVDSEKITR"
     gene            complement(17947..18621)
                     /gene="crp"
                     /locus_tag="PXF40_001153"
     CDS             complement(17947..18621)
                     /gene="crp"
                     /locus_tag="PXF40_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010787261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HDL5802498.1"
                     /translation="MQDMTLSTAPLENVTPPPSIHDPAVEWFLTHCHIHRYPAKYTLI
                     HAGEDAESLFYIVNGSVSVYIKDDETKEMLLTNLGTGEFVGELSLFEEKVQQRTAYVR
                     TKGPCEIAEISYKKFKQLVHLNPDILMYLSAQMARRLRQTSRQVGNLAFLDVAGRIAQ
                     TLLNLAKMPDAMTHPEGMQIKITRQEIGQMVGCSRETVGRIIKMLEDEGLISAHGKTI
                     VVYGAR"
     gene            complement(18683..18901)
                     /locus_tag="PXF40_001154"
     CDS             complement(18683..18901)
                     /locus_tag="PXF40_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HDL5802499.1"
                     /translation="MIIPWQELEESTLHNILDSFILREGTDYGERELSLAEKRERLLT
                     QLKADKVVIVWSELHESLDIKDKKSFLG"
     gene            complement(18904..19509)
                     /gene="slmA"
                     /locus_tag="PXF40_001155"
     CDS             complement(18904..19509)
                     /gene="slmA"
                     /locus_tag="PXF40_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HDL5802500.1"
                     /translation="MTEPKIKMPKKSVVERRQQVLEVLISLLNSEEGMQRITTERLAA
                     AVGVSEGALYRYFPSKTKMFEALIEKIEQTLTSYIHANKRQDSSANSVRAILYVILEF
                     ARKNPGVTRILTGHALMFEEELLKARVAKFFDNLELQFANILQLSKLRERKSFEDERA
                     LAGYLVNFCEGQFLRLVRSNFSYNQHQHFEKQWAFIKPLFD"
     gene            complement(19521..19976)
                     /gene="dut"
                     /locus_tag="PXF40_001156"
     CDS             complement(19521..19976)
                     /gene="dut"
                     /locus_tag="PXF40_001156"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HDL5802501.1"
                     /translation="MKQIDLKILDSRIGNEFPLPAYATEGSAGLDLRAMLNEPLTVKA
                     GETVLIPTGISIYIADPNLAAVILPRSGLGHKNGIVLGNLVGLIDSDYQGELKVSLWN
                     RSQADFTVNVGDRIAQLVFVPVVQASFNIVQEFEQTDRGEGGFGHSGKQ"
     gene            complement(20010..20849)
                     /locus_tag="PXF40_001157"
     CDS             complement(20010..20849)
                     /locus_tag="PXF40_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5802502.1"
                     /translation="MKKYNIVFSADKNYLPYLEIALKSLLAHHNHLSIFILSTGDISH
                     HWIETLRPYLENRYSTLRLGYLDSNNLANFNSNGYITNSTYLRYYIEELFEHSDSPYW
                     IYLDCDLVVNGNITDPFTNLDFSFGSIAAIADPYVNKLKNHPYIYKNYFNAGVFYLNA
                     KHFSKQPFIQLTERFKENLPFGDQDILNYCFQYNWIELDRKYNYQTEHLLDDIAQQKI
                     SPNYIPHIIHFTGGIKPLEGKFNSSYVENVASLFRFYHNTSWEILTELPLGTIQLKPF
                     ITE"
     gene            complement(20836..21018)
                     /locus_tag="PXF40_001158"
     CDS             complement(20836..21018)
                     /locus_tag="PXF40_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HDL5802503.1"
                     /translation="MKIMQLTSNQYINDIKHILLSARQKAYQAVNSAMVEAYWKIGER
                     IVQEEKNMVKDQNEKV"
     gene            complement(21015..21332)
                     /locus_tag="PXF40_001159"
     CDS             complement(21015..21332)
                     /locus_tag="PXF40_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802504.1"
                     /translation="MKLLVSHFHQGEGKFPTFSAGTAVRLGSECVNYPNWFACEIDGW
                     KTFVPSHFISEDKLICDYNPTELVAAQGERVEFLELHYQWAIVKRENEIGWLPCEILR
                     VIG"
     gene            complement(21332..22534)
                     /gene="coaBC"
                     /locus_tag="PXF40_001160"
     CDS             complement(21332..22534)
                     /gene="coaBC"
                     /locus_tag="PXF40_001160"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HDL5802505.1"
                     /translation="MLQNKKILVGISGGIAAYKTIEFIRHLKKANAEVRVVLTPAAEA
                     FVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLIVIAPASADFIARLRMGMG
                     NDLLSTLCLATASPILLAPAMNQQMYKQIAVQENLSVLVNRGVQLIGPNSGFQACGDV
                     GAGRMSEPEEIYQAVLAHFSNNQDLEGLNVTITAGPTREAIDPVRYISNHSSGKMGYA
                     IANAFAERGAKVTLISGPVNLPTPKNVERINVESAVEMEQQAVKFAQKSAIFIGCAAV
                     ADYRMAAVSDQKIKKTDANDELTLKLVKNPDIIANVANLAENRPFVVGFAAETQNVAE
                     YAKSKLERKNLDMICANDVSGGQVFGQDQNALHLFWKNGEKTLPLADKSKLAESLVQE
                     IVKHYREK"
     gene            22684..23421
                     /gene="radC"
                     /locus_tag="PXF40_001161"
     CDS             22684..23421
                     /gene="radC"
                     /locus_tag="PXF40_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HDL5802506.1"
                     /translation="MEEKMNDFFDEDSQEPTMMPREKLLTQGAASLTDSELLAIFLRT
                     GTKAVPVLALAESVLMAFGSLRQLLNANIDDFCKIYGLGKTKYIQLQASKEMTKRYLA
                     QQMEFSEMIQAPYMAIMYFQTELEEEEREVFMVLFLDNQNRLIYKEKMFFGTINQTAV
                     HPREIIKRALKYNAAAIIVAHNHPSGSCLPSESDRSLTKKIEMACELVDIRFVDHIIV
                     GKGDYFSFEEEKLEMKEHSFLQISDRK"
     gene            23653..23889
                     /gene="rpmB"
                     /locus_tag="PXF40_001162"
     CDS             23653..23889
                     /gene="rpmB"
                     /locus_tag="PXF40_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_004997628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HDL5802507.1"
                     /translation="MSRVCQVTGKRPAVGNNRSHAMNATKRRFLPNLHTHRFWVESEN
                     RFVTLRLTAKGMRIIDKKGIDAVLAEIRARGEKI"
     gene            23901..24071
                     /gene="rpmG"
                     /locus_tag="PXF40_001163"
     CDS             23901..24071
                     /gene="rpmG"
                     /locus_tag="PXF40_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HDL5802508.1"
                     /translation="MAAKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVV
                     RKHVIYKEAKIK"
BASE COUNT         7210 a         4957 c         5167 g         6748 t
ORIGIN      
        1 attacccatt tttatagaga gaaatacctt tccgatcaat ataatttttt agcgttatat
       61 ccacaagata aaacgcaaat atgccaaaaa tttcaaaaag agcagatcag ccaagcggat
      121 ttatccgata aacaattcag gtttttacag tatcaatttg cctgccaatt ccatagttta
      181 tttaaagata aaaaaccgac taaagagaaa tatattcact ttacccattt ggcggattat
      241 ttagatttat caaatgtgcc aaaccaagag atttatacta ttcattcttt agctgaatta
      301 cctagtagca gtgaacgtga gcctaaaatt gtgcttgcta aaaacgcaat taatgaaaac
      361 ttaccgcaag agttttacgg cattgtgata accgactatc tgtttgatat taccggcaaa
      421 aaaatgtacg gcacgcttta ttcctcttat gataatgccc gagaggagcg aaatttaacg
      481 tttaaaaaag aggtactggc agagcttgag gcgaggtatt ccgcttggcg atatttgcca
      541 tattccgaac atttgatggg agcggttgat gattaaatat aaagcagaaa cggctttgtc
      601 gcttttggtt gccatcacgc tatttgcgat tgtggtgttg agtttcagcc agtggcaatc
      661 ggcacaaaac cacaggctaa atcaacattt ccaacagcaa caagcggtta tgattttaga
      721 aaatcagctt gccctcaaat tagccgggtt agattgtgaa tcaagtatta ctcaaaatca
      781 gattcgctat cagattcaat gctctggcaa tcgcttaacc attcgctttc cgttaggcaa
      841 aattgagctg aataatgatt gaatcgtccc tcgctttgga ggacaataat tcaattagcg
      901 aggcgttatt atgtttacac tttaccaatc caaccaaatt tcatcactgg cggagatgct
      961 ggtgaaaatc cagcaggtaa acccacttga agatccgttt gagccggaaa ccattttgat
     1021 ccaaagtcag ggaatggcac agtggctaca aatgcagatt gctgaattaa acggtgtgat
     1081 ggggaattgc gattttctct accctactac atttttatgg caacagtatc ggctgttgtt
     1141 cccggagctg ccgaaagaga atatttttga gcgtagttcg ttggtttggc ggattatgcg
     1201 gttattgccg agttgcttga cactatcgga gtttgctccg ctaaagcgtt atttaggtga
     1261 tcaacctaat aaagaacagt atcagcttaa gctctatcaa ctttctgcca aaattgccga
     1321 attgttcgac caatatttgg tgtatcgccc ccattggctg gttagctggg aagagggcaa
     1381 cttacaagcg atcgaaaatg agataaaaat tgcaactgcc gctaagccga ttgattttga
     1441 cttaattcga gccgatatga aatggcaaag ccatttatgg caacagattg tatctgatct
     1501 gcaatcggaa tctgatgagc aggtttttac tacctcccac cgtgcctatt tgcaacaaaa
     1561 ttacttcgct aagttagatg accttactga aacggaaaaa gccaaattgc caaaacgcat
     1621 tttcattttt gggatttcgt ccttctcgcc attacagtta gcggtgttta agaaactcag
     1681 cgagcattgc gatattcacc tgttcttttt taacccaagc gaaaaatatt ggggcgacag
     1741 tgtggaagaa aaagtgtggc aaaaattggc gttaagccac aagatttcgc aagacgatct
     1801 ggataactta ttggcggagc aaagaaataa actactgaat ctttggggca aacaagggcg
     1861 ggatttctta gctcaattaa tcgaatttga gccgaatacc atggatgtct ttgtcgaacc
     1921 agaggaaaac agcaacctca ataaactcaa aaaacagatt ttcagcttag aaaatgacgc
     1981 cactattacc gatttaaccg ccgataattc actccaaatt cattcgtgcc acagcccaat
     2041 gcgggaagtg gaagtgttgc ataaccagct cctgaatttg tttgagcaag atagcacttt
     2101 gctgccgaaa gatattattg tgatgtcgcc ggatattaat aaatacgctc cttacattga
     2161 tgcggtgttt tctcgctaca atacgggtaa tcgggatcct cgctatattc ctttttcatt
     2221 atccgaccaa gcatttacgc aggttgatcc gattatccac agtttcctgc aactgctggc
     2281 aatgaaagaa agcccgttta atgccgaaga actgtttgat ttactggaag tgaatgcgat
     2341 ccaaacccgt tttggcttta gtacggaaga tattcatacc ctgcgggttt gggtgagaaa
     2401 tgccggcgta cgttcgggtg tagaaatcga gcaacctcac tggcaaaact acaattcgtg
     2461 ggaaaacggg ctaaaccgtt tattgcttgg ctcaagcctg aaagaagagc aggggatttg
     2521 ggaaaacacc cttgcctttg gggatagcta tggcttaaat gccgagctgg tggggcgact
     2581 tgcctctttt attgaggctt tattagcgtg ggtaaacttt ctgcaaacgc cacagccgtt
     2641 ggcagcgtgg cagcaggcaa taaaaaattt gactgctgat ctgtatcaag aaaatgccga
     2701 aaatgctgca tcaattttat tgttgaataa tgtgaatgat cagattatcg agcaaatttc
     2761 cgcaacccat ttttcagacg atctgcaaat tgaggtttta gccttattgt ttgagcagca
     2821 gctcagccaa cattcacagc agcttaattt cttggtcgga cgggtgaatt ttgccacctt
     2881 gcttccgatg cgggcgattc cgtttaaggt aatttgcttg ctgggtatga atgaggcaga
     2941 tttccctcgc caacaacaaa tcaatagctt tgatttaatg cagtacgccc cgaaaaaggg
     3001 agaccgtgcc aaacgtgatg atgaccgcta cttgttctta gaagccttac tttccgctca
     3061 gcaaatgttt tacatcagct atatcgggca gtcgcaaaaa gacggcaaag agatgctacc
     3121 gtcgattttg gtttcccaac tgttagatgc aatgaatgaa gctttaacgc ctgaatgcaa
     3181 gcaacaatta agcgatgaag tggaagtttt ggtcagaaaa caacctttaa gtgtgtttag
     3241 caaaaagaat tttacccacc cacgagatca cgcttataac gcagagtgga ttatcaagcc
     3301 gactgttgcc gtacaagatt ttcttagtga gcctttaacc aatgaaagcg tggcttcgct
     3361 agaacttgat gaattaatct cttttgtaca aaacccgatt aggtttttct ttctaaaagt
     3421 gttggggatt tcgtttaaca cttatgatga caccattgat gaaagcgaaa tttttgagat
     3481 gtcggggctg gataactacc ggattttaaa cgaattatta acgataaatt tagcacaaca
     3541 gcaacgtttt tttgccgaag agcaactcaa aggcaattta cctgcttctt attttgctca
     3601 aattgccaca caagatttga tcggcaaaat taccgaaatg caagcggcgt taagccacta
     3661 tttagccagc gaaagccgta ttttgagtgt taatcgggag gttgagctgg aacgccaaac
     3721 cctcacccta aacggcaata ttgccaacct atatcagaat gaagtggtgc tatggcgagt
     3781 agggcattta cgagataaag acaagattca gacttggatc taccatttat tattgtgtgc
     3841 ctatttccct gaaaaaacgg tgaaattcta ttaccgagag ggtgagcaag ttggtgtgtt
     3901 gagctttgaa accgtctcgc agatagaggc attatcgcaa ttaagcattt atttgaatgc
     3961 ttatttggac ggattatcgc aagcccagtt agtgatctac gaccgaattg aggaatatct
     4021 caaaggtgat ggcacaaaca gcgaacaagt tcttatcgat ttagcagaga aagatgagcg
     4081 agacggcagc tatctccatc ggcttctcgc tcaaactaaa gagctggatt ctcaagcgat
     4141 tcaccaacgt actcaaagct ggtttagctt aatgaatcag aaaatagcga aaggcgatta
     4201 actacaagcg gtcgtttttg gctgaaaatt tgcaaaatga gaaggcgaat aataattcgc
     4261 ctacctataa aaatagaatt ttttccgtat tttactgtca atttattact acaatgctaa
     4321 tttcaaaagg agatgtatga aattatcttt tcttacccaa ttcgttgcag cggcttttgc
     4381 cctcaatgtg atgacttacc ctgcatttgc ggaagttgca aaaaattctg aaaaaacgac
     4441 cgctagtcaa ccccaatccc aactcggttt tgagctgatt aaacagagca ttaacaaaag
     4501 cccgaatgat aaagcgattt atcaaggtat taaacttgat aatggaatgg aagtgctact
     4561 gatttccgac agtcaagcga ataaatcgtt gatgtctgcc attattccga ttggctcaat
     4621 ggatgacccg atttctcagc aaggtttagc ccactatctt gagcatatga tcttgatggg
     4681 ctcgaaaaac tatccggaaa ccaacagctt agacggtttt ttaaccaaaa atggcggtat
     4741 gaataatgcc tcgactgctt ctcaccgcac ggcgtattat ctacaagtca ataacgaagc
     4801 ctttagcgaa gcggtaacac gactggcgga tacgttagct ttcccgttat tgctggaaac
     4861 caacgccaag aaagaggtta atgcggtcaa tgcggagatg gtgcgagcta aatcgcacga
     4921 tgggcattta ttgcacagtg ttaatttagc caccgcaaac ccggctcatc ctgctaccaa
     4981 atttgcggta ggcaataaag agacgttatc tgacaagccg gatagcaaat tacaaaccga
     5041 gttggagcaa ttttataaac agcattattc tgcgaatctg tttaaagtgg tgctttattc
     5101 caatcaatcg attgagcaga tggcaaaatt ggcagccaac actttaggca aaatggaaaa
     5161 caaacatttc agcataccgc aaaccgctga gccacgttat cgtgatgagg acaaatcggt
     5221 atttattcaa tataagccgg tgaaatccaa caaaatgtta gtcattggct ttgattttcc
     5281 gaatgacgaa atgcagttta agcacaaaac cggtaaatat attgcttata tgttaaacaa
     5341 taatactgac ggcacgcttt cggattactt gattaaacag gggttgtctg acggcggtat
     5401 tgaggcggtt agcagtgcca atatcgggcg ggatcgaggc tcgtttgaca tctatattga
     5461 actgacagac aaaggtttga gcgagcaaga tcaaattatt tcattggttt tccaacaaat
     5521 tgagaagatc aaacaagaag gcattcaaga gagctatttt agcgaagtga aagagagcct
     5581 gaagcaggat ttccaacatt tgcaagtgga aaaaaatatg gatttcgtgg aatttattgc
     5641 cgatcaaatg ctccatttcc cgttagaaca cgttatcgat cagccttatc tgaccgaaac
     5701 aatggataac gaggcaatta aagcaaaatt ggcggcaatg aatattgata atgcccgcat
     5761 tatgttagtc agcgatactg ccaaaaccga caagaaaacc ccttattttg aagcaggtta
     5821 ttcggtggca aaaatcacgc aagaacaaaa gcaaaaatgg ctggatttca gtaaaaatcc
     5881 acagctcaat ttgcctgaat tgaacccgta tttcactacc gattttacct taaacaaggt
     5941 cgaaaccggc ttaactaaac cgaaattgat taacgaccaa gcggggaatt taatctatac
     6001 aatgccgagc gtgtatttta ccaatgaacc gaaggctaaa atcggcgttg gctttaatat
     6061 tcgcccgaga aaagatgact taaagagcct gaccgcagcg tctattttgg gttatatgaa
     6121 caatttagcc caaaccaagt tagattttca gtcttcggtg gcgggtatga atttaagttt
     6181 agctccggcg gcaaacggtt tagccttaag tgcagagggt tatacccaaa atctggctaa
     6241 attaatgcta gacagcgtaa aacagttcag ccgctttgag tttaacgaag acgtgttggc
     6301 acaggctaaa caacgtttgc accaagagct ggatcgtaac gaaaaagaaa acagccttaa
     6361 tcaagctaat gcagcattaa gccgttttgc ctcttaccct tattttgatg tgccgaaaca
     6421 gcgtgagatg attgatagca ttacccttgc ggatattgag caactacgcc agcgaatttt
     6481 gcagcagagc agcggcttta agttgttatc ggtggggaat ttgtcggctg agcaggtttc
     6541 tgctctggca gaggatttac aagcggtcat aaaaaaccaa aaatctgcaa atgctaccgg
     6601 acagtatgtg gatgtgagta ccagtcagcg taagattaat gtgattaaaa gcgtgccgaa
     6661 tgaagataat gcgttgctaa tggcatttat gccgaacggc tataacgagc tggaaagcct
     6721 tactcgagcc aaattgctca gaagcattat ttcccgttgg tattttgatg atttgcgtac
     6781 tgataagcaa ctaggctatg tggtttatgc gacagataat atcatcggga aaaccgccgg
     6841 tatccagttt atggtacaaa gcccgaatac cacaccggca gggattttag agcataacga
     6901 acgtttcttt acacaaagtt tcgaacgttt aaaaaatcta tctgatgagg aatttggaaa
     6961 atatcgtgat agcctagtgg aaaaactgca atataaaccg gagtctttag cggaagagtt
     7021 ttctgagttc ggttcagact ttagcagaaa taacccgaaa tttgaccgct tgcaacaggt
     7081 gatcgaatta accaaagcac tcaccaaagc agatattgtg gcattttacc aaaaagctgt
     7141 gattgaaaag caaggcttcg tgtttgtcag ccaagctgtc ggcaccaaaa ccaaagctga
     7201 agacgttgcg aaatttgacg gttttgaaca gatcgaaagc attgaaaagc tacaacgaga
     7261 gtttgagatt aaggattatt agagagttat tagagagagt taggggcgaa aaattttcgc
     7321 ccctcatttt ttaatccaca attttcaccg gatataagta agtatatccg aacggacttt
     7381 gtttgtagcc ttcaacacgt ttgctggttg gggcaaagtt aattgagtga gccacgttaa
     7441 tccacggagc ttgctctctt aagataacct gtgcctgctc gtataactta gtacgttctg
     7501 ctttatcaga tgagcctaat gctttttcta ataacgcatc taactcaggg ttagtaaagc
     7561 gagcatagtt actgttgccg atatttggcg tgccgaatag tggcgataag aagttatccg
     7621 gatcgccgtt atcgcccgac caaccgtaag ttccggcggt taattcaccg gctttggtac
     7681 gcttgatgta atcaccccat tcataggtga ctaattttgc ttttacgccg attttttccc
     7741 agtcggcttg aataatttca gacatacggc gtgggttcgg gttagaagca cgcaccacag
     7801 gctgcaccca taattcggtt tcaaaaccgt tcgggaagcc tgcttcagct aatagttgct
     7861 tcgctttttc cacgttatat tctgaatccg ctaagctgtc gttatagccc caaatggttg
     7921 gcggaagtgg gtttttcgcc gcaaaaccgt taccttggta aactacatca ataatcgctt
     7981 ttttatccac tgctaagttt aacgcttggc gaactttcac gttatcaaac ggagcttttt
     8041 cggtattgaa tgccacataa gcaatgttca aacccggttg agaaagtaaa ttgattttcg
     8101 gatcattttt cattttctca atgtcggttg catttgggaa gtccattaaa tcacattgac
     8161 cggattgtaa tttcgcataa cgggttgttg catccggcac gatctcaaaa atcaaacggt
     8221 caatgtcagg cttacctttc caatactctt tgtttgctac ataacgactg gcttggtcta
     8281 gcacataacc gctaaacaca aacggacctg tgccgattgg cgtggtatct accgcttcag
     8341 gtatgccggc tttcatcatt ttatccgcat attccgccga ataaatggag gtgaaatcca
     8401 taccaaggct ggataagaat gacgcatcac gtttggttaa ggtaatacga acggtgctgt
     8461 cgtccacttt ttccaccgat ttcaataatg tcgggaattt cattgcgttg aaatacggat
     8521 aagtgccgtt agagacggtg tgatacggat gatttttatc taactgacgg ttaaatgaaa
     8581 atactacatc gtccgcattc aattcacggc ttggagtgaa gtctttgttt gaatggaatt
     8641 tcacgccttt gcgtaattta aaggtgtaag ttaagccgtc ttcgctgatt tcccagcttt
     8701 ctgccaatgc cggttcaata tcggttgtac ccggcacaaa ttccaccaag cggttgtaaa
     8761 tttgttgcga gctggcgtta taagataaac cgtccatcat taaaatcggg ctaaaaccgg
     8821 ttggcgaacg gctaacgcag tttacaaagg ttttctcggt ttgcggtttt gctgctgccg
     8881 cagtaggttt attttcgttg cttttatcat cgcaagccgc tagagctaat accgctaaaa
     8941 cgcttgcact aattttggtt aacgttggaa atttcatatt attctccgct taatcttagg
     9001 attaacttac gaagattacc ttttccacaa tgaggagtaa agaacaaaaa gcattatttt
     9061 tgcaaatcaa tccatagaat tagataccgt caacgtcatt gccacccgtg atccaagtaa
     9121 atttgccgat acgccacaaa aacaaactaa agatgcactt ttggtaaaac aagcgacgag
     9181 tgtggcggcg gcattaaaag cgttgccgaa tgtggatgtg caaggagggg cccgtgcgat
     9241 tgtgcagaag ccgtctattc gtgggttgag cgataatcgt attgtgcagg tgattgacgg
     9301 agtgcgtcag aattttgatt tggctcaccg tggttcttat tttgtgccga tgtcattgat
     9361 tcaagaaatt gaagtaatca aaggtccaag cagctcgttg tgggggagcg gtgccttagg
     9421 tggggtggtg gcaatgcgca caccgaatgc gttggattta ttgaaaaata atgacaaatt
     9481 cggggcaaaa atccgtcaag gttatcaaac ggcgaataat ctttccgaaa ccgaagcctc
     9541 ggtgtttgca gcaaatgatc ggtttgatgc cctgctgagt ggtttctaca ataatgctga
     9601 caatttgcgt agcggtgaag gcaaggaact gaataacacg ggctataagc aagccggcgg
     9661 tttagtaaaa ttcggctggc aaattaacga tactcatcgt ttggaattat cccatcgtca
     9721 tagccaattt aaacaaactg caccgggtaa taacgaggta gaaaatcaat ttaccgataa
     9781 tgatgttagt gcacaaatta gtgcttggca tgcggctaat cctggaaatc caagtaatcc
     9841 agtatatctt gcgaaaatgt tagcctttta cggtcaatta cattcaagtc ttggtagtgt
     9901 gagttattta agtgatcaaa aaattaccga taaaagcacc tcacttaact actatttcaa
     9961 cccaagcaat ccttatttga gcacacaagt gacattatat agcaatagta ccactgaaaa
    10021 cgaacatcga aaaataagtg gtgtggaaga tcaaactaaa ctaagcactc gtggtgtgaa
    10081 tatccgtaat cattccgaat tgtcttggtt ctccttggtg tatggcgtgg attatatgtt
    10141 ggataaagta gccactcagc gtgggagaaa taatacggac gcacaatacc gtgctaatcc
    10201 ttatgatgct aaatctaaaa ctacaggtgc ttatttaatt gcacatattc cgctgtttga
    10261 tgaaaaagtg gtcttttctc cgagcgtgcg ttacgaccgt ttcgatactt caagtgaaac
    10321 ggtgaaatat aaagacagcc attggtctcc tgctgcaaaa cttacttgga aagcgacaaa
    10381 ttggttggat ttaaccgcga aatataacga agctttcaga gccccttcta tgcaagaacg
    10441 atttgtgagc gggtctcatt ttggtaccac agtgagagga ttacctatta ataatatttt
    10501 cttaactaac cctaatttac gcccggaaac ggcaaaaaat aaggaagtaa ccttcaatgt
    10561 acattttgat aatgtcatct cgcaaggaga taaatttaac tttgaagcga cttatttccg
    10621 taatgatgtg aaggatttga ttaatcttca agtattcaaa gcaaatccta caagcccaat
    10681 ggaatttatt cccactcgtt cccaatatca aaatattgcg aatgcacgtt tgagtggtat
    10741 tgaattacaa actcgttatc aaactgaacg tttggcagtt tttgctaact acggtagtac
    10801 aaaaggtaaa gataaagaca gcggggaagc cttgtcgaac attgctgcaa gcaaaatcgg
    10861 cttcggggtc aattatgccg tggtgcaaga caaattcacg gtgggggcaa acgtaacccg
    10921 ttatcaagca caacatcgtg tgccgaaaaa ccacggcgtg acttaccaag gctatacgct
    10981 gaccgatcta cacgccactt acgccccatt aaaaggcgaa tggaaaaacc tgcgtttaga
    11041 cgtggcggtt gaaaacctat tcgataaaaa ataccaaccg gcattcagct taatggaagg
    11101 cagcggtcgt aatgtgaaac tcagtgcggc ttacagcttc taatgtcttt aacggaagac
    11161 ggcacaagcg gtcgttttcc ggttattttt tgcaatatta aaagggagtt actatgaaat
    11221 tttatccgtc gctgatcgca agtgcggtca gttttgccgt tgttttgagt ggacaagcgg
    11281 cagtgaatgt gccggatgcc ggctcgttac agcgtgaatt agaccaacgt caagctcaac
    11341 aaaaagtcaa accgagtggc gaatggttta atcaagcggc aaaagcacct tataccgcaa
    11401 cggacggtca agaactgaca tttccattaa ctcaggtaca agtttttgat cgaaccaacc
    11461 aagaaatctc taccccggaa ttagccccga ttttggcaaa ctatgtgggt aaagcggttt
    11521 cgctgaccga tttaagcaac ttggcaaatg agatcaccga gttttatcgt agccacaatt
    11581 atctggtggc aaaagccatt ttaccgccac aggaaattga acaaggtaag gtgaaaatcc
    11641 tgttgtttaa aggcaatgtc ggtgaagtgc ggttacaaaa tcagagtgct ttaagcgata
    11701 aatttgttgc acgccttgcc aacaccacag tgaatggttc ggaatttatc ctaaaagacg
    11761 aattggaaaa atttgccctc acgatgaatg atgttcccgg ggtgaatacc ggcttggagc
    11821 tttctgccgg taagcaagca ggcgaggcga atttgctgat taagctccaa aatgccgagc
    11881 gtttctcagg ctatgtatcg gcagataacc aaggcaataa aaataccgga cgttaccgtt
    11941 tagccacagg gataaaagcc aataatctga taggttgggg cgatgagttg aaagtggatt
    12001 tgatgagttc caacaacgct aatttaaaaa atgcgcgttt ggattattcg agcttgattg
    12061 acggctacgc tacccgtttg ggcttaacgg cgaattatct cgactacgaa ttaggcggta
    12121 actttaaagc cctgcaatcc caagggcata ctcacaatct tggggcttat gtgttgcacc
    12181 cgacaatccg cttgccggat tttcggttaa acaccaaagt cagctttaat catcaacgtt
    12241 taaccgacaa acaacaagcg gtcaatgtgg cacaaaaacg ccaagtaaac agcttaacgg
    12301 tgggcattaa cgggtcgtgg aattcgctta aagacggcac aagctatttc tctctgtctg
    12361 ccttgttcgg caatttagct aaccacacca acgagcaagc gcattatgtg gcaacagatt
    12421 ttcagcccaa atcccgtttt acggtctatc aatacagcct gtctcacgaa caagcgctgc
    12481 caaaatcctt tgccttcaac cttggcgtga acgggcagtt tgcggataaa accctcgaca
    12541 gctcacaaaa aatgttactg ggcggtttat acggcgtgcg tggtcatcaa gccggtgtcg
    12601 cttcggtgga tgaggggcat ttagtgcaaa ccgaactcaa gcattattta ccgctctttt
    12661 ccaaaagcct gctgaccagc tcggtcttct atgattatgg ttggggaaaa tactataaac
    12721 acagcggatt tttggcgcgt ggtgtaaaca atagcgtgaa attacagagt atcggagcag
    12781 ggctttcgct ctctgaagca ggcagttatg ccattaacgc cagtgttgcc aaaccgctgg
    12841 gtaaaaaaat cgagaatgca gataaacacc aattctggtt ctccgccatc aaaaccttct
    12901 aaggagacaa actatgttta aacgtaatgc aatttctctc tgcattttga ccgcttgcag
    12961 cggtttagcc tatgccaata cagcagattt gccgcaaggt gaaagggtgc gtgtcgggac
    13021 ggcaacgatt gagcgcacaa ccgataaaat gaccgtgaat caatccagca ataaagtaca
    13081 aattgattgg aacagctttg atattggtaa gaataaagaa gtggaattca aacagccgac
    13141 agagatggcg gtggcatata accgtgttac cggcggaaac gccagtcaaa ttcaaggcaa
    13201 gctgaccgca aacggcaaag tgtatttagc caacccgaac ggtgtactca tcaccaaaga
    13261 tgcggaagtg aatgtgggcg gtttgttagt gaccacaaaa gatttagaaa aaatcagcga
    13321 aaacggcaca aaagataaat tcagtcgcaa attagcgaaa gaaggcaaaa ttcttaacca
    13381 aggtaaaatt acggccaaag gcgagcgggc ttttgtggta ttggtgggcg acgatgtggc
    13441 taatgaaggg gaaattaacg ccaaaaatta ttaccacaaa gaaacgaaaa aagtcaccga
    13501 atgttatgac gattcttgga gcttggtaaa acaatgctac gattttgata aagaaatcgt
    13561 gaaaagtacc agtggagaag tgcatttatc ctccggagaa aatgtcacct ttactttaag
    13621 cgaccgctat attgatgtgg cgttagacga taatacggtc aatagcatta tcaaaaatga
    13681 cggggcaatc atcgccaatg gtgacattac cctcactgcc aaagggcgaa atcaagcctt
    13741 agacagctta attatcaata acggcgtatt gcaagccaat aaggtgcaaa ataaaaacgg
    13801 tacgatcatt ttatctgccg gtgaaaccca attacacgaa aaaagccaaa ttaaaggcga
    13861 gaaagtgagc tttgccgaag cttcttatta cggtccgaca gaagacatta aagtggtttc
    13921 caaaaccggc tcaaaagtga ccgcacctgt gatcgatttc aaaggtaaaa ccgtgaatat
    13981 tcaaggggaa tttgggcgtg aagacagcac cgatctctat aacgatgaac tacaaatcct
    14041 caaaaccacg gtgaatattg aagtcccgaa tacggaagat attcgcattg cagataccga
    14101 caacggaggt agcggttcct ttatacaagc gggtgcttta gcctcattac ttgcaaataa
    14161 cggacgggtt aatgtacagg gcaaaggttt tgatgtctca ggcaagttga atgtgaatgc
    14221 ctttaaacaa acggattccg tgctgaaatt tatcaatcag gcgggcatca atatccacaa
    14281 tgccgatatt cacgcaaacg ggcgtttatt ctttgtgaca aacttgccga atgacaccga
    14341 tttccaatcg aatatccgca ttaccgacag caaaatcaac ttaggcaacg gctcaatggg
    14401 ctttggtcgc agtagcaaac gttgggaaat gcacgatgtg gttcgacgtg ccgatacgga
    14461 actgcgtaaa aaattcaatc tggatatgaa aaacgtggaa ttaaaccaag tggatgattt
    14521 tgtggtagcg ggcggtttcc aacaagttaa tttggataac gtgaaagccc gtggcaaaac
    14581 caacttctat ctggattccg gcaactcccg catgtttgtc ggtgagcaga tttatgaata
    14641 tggcgtaacc gatattgaaa aacgcaccca attggcgaat ttagaccagc gtagaaaacg
    14701 ttggaattcg gataactatg atgagaccga tctcaactgg gaatacaacc aacgctttga
    14761 cggctttgca gcaaaacaca atcaccgcgc gccgattgcc gatacggaaa tcaatattgc
    14821 caatagtgat atcagcttag ataacggttt tgtgcattta atggcagaaa aaatcaatct
    14881 ggacgacagc aaaatcaata tcaccttcaa ccaagacaac agcttggatg aaagtaccca
    14941 aatcaaccgc ttaggactaa acggcaaagt gtcgatgaaa aacagccata ttaacgtagt
    15001 gggcgatgaa aaagacggta tctcaccggc tcgccattat gccacgatgt tcttagtggg
    15061 ggagctgctt ggtgaaaaga gttctatttt cctcaaatcc caccaaggtg cagtattgag
    15121 aaccgacagc aatgttacaa ttgccggtaa aaacagcaaa gacgacctca aaattaccgc
    15181 cattaccacc ggtaaaaaaa tgggcaatga aatcatcgga ccggacggct tgccaacctc
    15241 ggaagataac gatgccaacg ccagcaacac cgcctttgcc atcggctatg aacctaacgc
    15301 tacggctatc gtcgaaaatg caagcattac cgcattagca ccaaacggcg gcttggcata
    15361 caccggcacg tctaaaaccc aaattgacgc gaaggataat gctaccttta ccttctttga
    15421 aaaacctcga gccggctatg acaaattgct tggcgacatc aaaggtaacc ccgataaatt
    15481 aaccccacgc gatttcgccc gtttatacga caacattaaa ggcatcaaag ccagcagcct
    15541 atccgaacaa cagcttggcc tagcagacac cgcgaagaaa accagcgaac acaccttagc
    15601 aaacagccta gacgtagaaa atttggtttc agtgacagtg tgtgatgagc agaataagtg
    15661 tgaggagcgt atgttaggta acaaaaatac caatgctaaa gttattgtcg gagatatcaa
    15721 atttgagtag cgttgaagaa agtggtagaa gctcagactt gatctgataa agcactataa
    15781 aaagtgagag tttcccgttt agaatatgag tgtcaaaatt caatctaaac aaaaaggaaa
    15841 ctctcatgtt ttattactta caatcccctc attaaacaca agaccggttt attaaattta
    15901 gcagaagaac cgggcaatat ctctcaagcc tgcaatgtgg tgggtatgag cctagataca
    15961 ttctattgct atcaacaagc ggttattttt ggcaactaat ttgcaaaaaa acaataaaat
    16021 ccgaccgctt gtagagggtt aatccgccct tagtgaaatt tcaccgatgc cgaaatagcg
    16081 gaggttgtcg ccctgtttta gaatgagttc gccctgctcg ttaatgcctt gcgaaatgcc
    16141 gtggatttct tcggcttcgg taatgagctt aaccgcttta tggcggaaaa ggtcgaaact
    16201 ttgccagcgt tcggcataat gagcgaagcc gacaagcgga taaattttga gatttttttg
    16261 caattcatag gctaaacggc aaaccaattc gttgcggttg aaatgatatt gcgataaatc
    16321 tgcccacgct tgcgtcacaa tattttcatc cacttttgcc attcctaggt tcagcccaat
    16381 gccgataacc acatctaaac cattgcgatt ggcttgggtt tccaacaaaa tgccccccat
    16441 ttttttgcct tggtaataaa tgtcattcgg ccatttaatt tgaatatctt ttacattttg
    16501 aacagtaagg ctttccgcaa tgatcaaggc taccactaaa cttaagggcg gtaaatctgc
    16561 cgcctgctcc atcgggtaat gccataaaat cgagaaatag agattttcac tctcgggcga
    16621 ataccaagtt cgacctcgtc tgccacgtcc ggcagtttgt ttttcagcga ggcaaaccgt
    16681 gccgttttcc aaacgttggt gatgagtgag caaatattca ttggttgaat caatttcatc
    16741 gaacacaacg gcttgcccgc aaattaaagc attttggatt tgagcttggt taagtttcat
    16801 tatttcccca cttagcgagt gattttttcg ctatcgacct caccgttttt accgataaaa
    16861 cgcacttcag gctgaatttc taccccaaat ttttctttca ctctctggcg aacggttttg
    16921 gctagagcca agacatcttg ccctgttgca ttttctttat taatcagcac taaggcttgc
    16981 tgggtatgta ccgccgctcc gccaatttgt aagtctttca gcccggtttg gtcaattaac
    17041 caacctgcgg ctaattttac cgttccatca gcttgagggt agtgaggaat ggctgggaat
    17101 ttggcttgta ttggtgcaaa ttgttcgttt gaaatcaccg gatttttaaa aaagctgccg
    17161 gcattgccaa attcgtcagg gtttggcaat ttggaggagc gaaccgcaca gacttcatca
    17221 aaaatctgta ttggcgtaac ggtttccgga ttgagttggg ctaatgatcc gtaacttagc
    17281 accggtttcc acgctttggc taactttaag cctaccgaga taatcgcaaa ttcatcacgg
    17341 tattggtgtt taaacacact ttcacgatag ccaaattcgc actcggattt ggatagctta
    17401 aagagttctc cggaacgtaa atttaacact tccacgaaat cacatacctg ttcaaattca
    17461 accccataag ctcctatatt ttgaatggga gcagagctgg cgacacccgg aattaacgcc
    17521 agattttcaa tgccggcaat attgtgtgcc aacgtccatt taaccaattc gtgccagttt
    17581 tccccacctt gaacgtgcaa atagtggaaa tgttcgtctt cgtggtgcgt aatccctttg
    17641 agtttattta ctaacaccac accgtcaaaa tcctctaaaa acaaaacgtt agagccttgc
    17701 ccgagaatca agattggcag ttgagcgtta aaggcttttt gccattcgct caatagctgt
    17761 tcgactgtgg taaattcaat aatttgggtc gcttttgcag gcaaatggaa agtgtgaaaa
    17821 ggggttaagc tatgtttcat catcaaatta gttagttaag aagtggaaat aacaagcggt
    17881 gatattttta caaaattttg caattaagat tttgggcagg cacaggatct gcccctacat
    17941 tcagaattac cttgccccat ataccacaat ggttttgccg tgagcagaaa ttaagccttc
    18001 gtcttccaac atttttataa tgcgtccaac ggtttcacgg gaacaaccga ccatttgccc
    18061 gatttcttgg cgggtaattt tgatctgcat accttccggg tgagtcattg catccggcat
    18121 tttagctaag ttgagcaagg tttgagcaat gcgaccggca acgtctaaaa aggcaagatt
    18181 accgacttgg cgtgaagttt gacgtaaacg gcgagccatt tgtgccgata aatacattaa
    18241 aatatcgggg tttaaatgga ctagttgttt gaatttttta taggaaattt ccgcaatttc
    18301 acaaggacct ttagtgcgga cgtaagcggt acgttgttgg actttttctt caaataaact
    18361 taattcaccg acaaactcac ctgtgcctaa gttagttaag agcatctctt tggtttcatc
    18421 atctttgatg taaaccgaca ctgagccatt cacgatgtag aaaagtgatt ctgcatcttc
    18481 accggcgtga atgagtgtat atttcgccgg ataacgatgg atatgacaat gggttaaaaa
    18541 ccactccacc gcagggtcgt gaatagaggg cggaggagtt acattttcca gaggagctgt
    18601 tgaaagtgtc atatcttgca tagtatttcc tataactctt atactaggtt aaatttttag
    18661 aattttaaca cgaaattaaa ggttagccta aaaaagattt tttgtcttta atatcaaggc
    18721 tttcgtgtaa ttccgaccaa acaatcacca ctttatctgc cttaagttgt gtgagtaatc
    18781 gttctctttt ttctgccaga gaaagttccc tttccccgta gtctgtgcct tctcgtaaaa
    18841 tgaaggaatc taaaatatta tgtaaggttg attcttcgag ttcttgccaa ggtataatca
    18901 taattaatca aataaaggct taataaatgc ccactgtttt tcaaaatgtt ggtgttggtt
    18961 atagctgaaa ttagaacgaa ccaagcgtaa aaattgccct tcgcagaaat tcactaaata
    19021 accggctaag gctctttcgt cttcaaagct cttgcgttca cgcagtttac taagttgcaa
    19081 aatattggca aattgtaact ccaagttatc aaagaatttt gccactcgag ctttgagcaa
    19141 ctcctcttca aacatcaagg cgtgtccggt caggatgcgg gtaacgcccg ggtttttgcg
    19201 agcaaattct aaaatcacat ataaaattgc tcgcaccgaa ttggcactgc tgtcttggcg
    19261 tttattggcg tgaatatagc tggtgagggt ctgctcgatt ttctcgatta acgcttcaaa
    19321 catcttggtt ttacttggga aatagcgata caacgccccc tccgacaccc ccaccgcagc
    19381 ggctaaacgc tcggtagtga tacgctgcat tccctcttca gaatttaaca agctgattaa
    19441 cacttccaac acttgttggc ggcgttccac cactgatttt ttcggcattt taattttagg
    19501 ttctgtcatt gccaatccta ttattgctta cctgaatgcc caaaaccgcc ttcgccacgg
    19561 tcggtctgct caaactcttg cacaatgtta aaacttgcct gaaccaccgg cacaaagact
    19621 aactgagcaa tacggtcgcc cacgttcacg gtaaaatcag cttggctacg gttccaaagc
    19681 gacactttca gctcgccttg gtaatcgcta tcgatcaagc cgactaagtt gcctagcacg
    19741 atcccgtttt tatgccctaa acctgatctt ggtaagatca ccgctgccaa attcggatcg
    19801 gcgatataaa ttgaaatccc cgttgggatc aacaccgttt cacccgcttt taccgtcagc
    19861 ggctcgttga gcatcgcccg tagatccaag cctgccgagc cttcggtcgc atacgcaggt
    19921 aatggaaatt cattgccgat acggctatct aaaattttta aatcaatttg tttcattctt
    19981 tttccttttt gtaaattttt aaaactatat tattcagtta taaaaggttt taattgtatc
    20041 gttccaagtg gaagttcagt caatatttcc cagcttgtgt tgtggtaaaa tcgaaataaa
    20101 cttgcaacgt tttcaacgta gcttgaatta aatttacctt ctaatggctt tattcctcca
    20161 gtaaaatgaa ttatatgtgg aatataattt ggcgaaattt tttgctgggc aatatcatct
    20221 aataaatgtt ctgtctgata attatatttt cgatctaact caatccaatt atattgaaag
    20281 cagtaattaa gaatatcttg atccccaaat ggtaaatttt ctttaaatct ctcagtaagc
    20341 tgtataaatg gttgcttact aaaatgcttt gcatttagat aaaatacacc agcattgaaa
    20401 tagtttttgt aaatataggg atgatttttt agtttgttta cataaggatc agcaattgca
    20461 gcaatacttc caaaagaaaa atctaggttt gtaaatggat ccgtaatatt tccattaacc
    20521 acaagatcgc aatctaaata aatccaatat gggctatcgc tgtgttcaaa tagttcttca
    20581 atataatatc gtaggtaagt tgaattagta atatagccgt tggagttaaa atttgctaaa
    20641 ttatttgaat ctaaatagcc aagtcttaat gtggaatatc tattttctaa ataggggcgt
    20701 aatgtttcta tccagtggtg agaaatatcg ccagtactca atataaaaat agataaatga
    20761 ttatgatgag ctaatagtga ttttaaggca atctctaaat atggcaggta gtttttatct
    20821 gctgaaaata caatattata ctttttcatt ttgatctttg accatatttt tctcttcttg
    20881 cacaattcgt tcaccgattt tccaataggc ttcgaccatt gccgaattca cggcttgata
    20941 cgccttttgg cgagcagata aaagaatatg tttaatgtcg ttgatatact gatttgacgt
    21001 aagttgcata attttcatcc tattaccctt aagatttcac aaggtagcca gccaatttcg
    21061 ttttctcttt tgacaattgc ccattggtaa tgtagttcaa ggaattctac tctctcgcct
    21121 tgtgctgcaa caagttccgt tgggttataa tcgcatatca atttatcttc gctaataaaa
    21181 tggcttggca caaaggtttt ccaaccgtca atttcacagg caaaccagtt tgggtagttt
    21241 acacattcac tccctaatcg aacggcagta ccagctgaga atgtaggaaa tttcccttcg
    21301 ccttgatgaa aatggctaac cagtaatttc attatttttc tcgataatgt tttacaattt
    21361 cctgtaccaa actttctgcc aatttgcttt tatccgccag aggaagcgtt ttttcaccat
    21421 ttttccagaa caaatgcaac gcattttgat cctgcccgaa cacttgtccg cctgagacat
    21481 cattggcaca aatcatatcc agatttttgc gttcgagttt cgatttagcg tactccgcca
    21541 cattttgcgt ttctgcggca aaaccaacca caaaagggcg gttttcggca agattggcga
    21601 cgttagcgat aatatcgggg ttttttacca attttagcgt gagttcatca ttggcatcgg
    21661 ttttcttaat tttttggtca gagactgccg ccattcggta atcggcaacc gctgcacagc
    21721 caataaaaat cgcagatttt tgggcaaatt tgaccgcttg ttgctccatc tcaaccgcag
    21781 attccacatt aattcgttcc acatttttcg gcgttggtaa attcaccgga ccgctaatca
    21841 acgtaacctt tgctccacgt tcggcaaagg cattagcaat cgcgtagccc attttgccgg
    21901 agctgtggtt gctgatataa cgcacagggt caatcgcctc acgagtcggt ccggcggtaa
    21961 tggttacatt taagccctct aaatcttgat tgttggagaa atgagccaac accgcttggt
    22021 aaatttcttc aggctcagac attctgccag cccccacatc accacaggct tggaagccac
    22081 tattcgggcc gatgagctga acgccacgat tgactaaaac agacagattt tcttgcaccg
    22141 caatctgttt gtacatttgt tgattcattg ccggtgcaag caaaatcggg cttgcagtcg
    22201 caaggcagag agtggaaagt aaatcgttgc ccattcccat acgcaggcga gcaataaaat
    22261 cggcacttgc cggggcgata acgattaaat ccgcccattt tgccagctca atatgcccca
    22321 tcgccagttc ggcttgtggg tcgagtagtg aagtggaaac cgcattgccg gaaatcgctt
    22381 gtaaggtcaa aggcgttaca aaggcttctg ctgctggggt tagcactaca cgcacttccg
    22441 catttgcctt ttttaagtgg cggataaatt caatggtttt gtaggctgca atcccaccgg
    22501 aaatgccgac taaaattttt ttgttttgta acatctttac tatccttaaa gcgtggattt
    22561 attttgcata ttttagcgga ataaggagtt gctcacaact tcactatttt tgcgatcttg
    22621 ctcgaaaaat tgaataaatc cctttgtctg caaaggttgg ctcttttatg cttaactaaa
    22681 ttgatggagg aaaaaatgaa cgattttttt gatgaagatt ctcaagagcc aacaatgatg
    22741 ccgcgtgaga aattattaac acagggggca gcctcattaa ccgattccga attattagcg
    22801 atatttttac ggactggtac gaaagctgtg cctgtgctgg cattggcaga gagtgtgttg
    22861 atggcatttg gctcgttacg ccaattactg aatgcaaata ttgatgattt ttgcaaaatt
    22921 tacggtttag gcaaaaccaa atacattcag ttacaagcct ctaaagagat gaccaaacgc
    22981 tatctggctc aacaaatgga atttagcgag atgattcaag ccccttatat ggcgattatg
    23041 tatttccaaa ccgagttgga ggaagaagaa cgggaagttt ttatggtgct gtttttggac
    23101 aaccaaaacc gattgattta taaagaaaaa atgttcttcg gcaccattaa tcaaactgct
    23161 gttcaccccc gagaaattat taaaagagcg ttaaaatata atgccgcggc gattattgtg
    23221 gctcataatc acccctcagg ttcttgtctg ccgagtgagt cggacagaag tttaactaaa
    23281 aagatcgaaa tggcgtgcga attggttgat attcgctttg tggatcatat tattgtcggc
    23341 aaaggggact atttttcgtt cgaggaagag aaattagaga tgaaggagca ttcatttttg
    23401 caaatttctg atagaaaatg accgcttgct ttatgtaacc tttaacattt ctcctgaaac
    23461 agtaaaagat acgcatataa attctacttg aatataacaa atgaaatcgg tataatcggc
    23521 agtctttatt acatagactg tggtcgggtt aatgcctgac gaggcaatca aaatcggagg
    23581 ggttggttga gcaacgcctt ttgtgagatc gcccgaacca tttttaagct taaaattatt
    23641 ggagaaattc aaatgtcaag agtttgccaa gtaaccggca agcgtccagc agttggtaac
    23701 aaccgctcac acgcaatgaa tgcgactaaa cgtcgtttct taccaaacct tcacactcac
    23761 cgtttctggg ttgagagcga aaaccgtttc gtaaccttac gtttaactgc gaaaggtatg
    23821 cgtattattg ataaaaaagg cattgatgca gtattagctg aaatccgtgc tcgtggcgaa
    23881 aaaatctaag gagctaaaaa atggcagcta aaggcgctcg tgagaaaatc cgtttagttt
    23941 ctacagcaga aactggtcac ttctacacaa cagataaaaa caaacgtaat atgcctgaaa
    24001 aaatggaaat caaaaaattt gatccagttg tgcgtaaaca cgttatctac aaagaagcaa
    24061 aaattaaata attttgtttt aa
//
LOCUS       DANMCL010000032        24002 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.032, whole genome shotgun sequence.
ACCESSION   DANMCL010000032 DANMCL010000000
VERSION     DANMCL010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 24002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24002
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.032"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(345..992)
                     /gene="rnt"
                     /locus_tag="PXF40_001164"
     CDS             complement(345..992)
                     /gene="rnt"
                     /locus_tag="PXF40_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010130043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HDL5802509.1"
                     /translation="MEQTTEQIDYKLLKHRFRGYLPVVIDVETAGLNAQTDALLELAA
                     ITLKMDEQGYLVPDQQCHFHIAPFEGANINPESLKFNGIDIDNPLRGAVAENIAIPEM
                     FKMVRKAMKEQGCQRAVIVAHNAAFDQGFLQAAIKRINAKRDPFHPFAMFDTATLAGF
                     MYGQTVLVKACQVAKIPFDGKQAHSALYDTERTAELFCAMVNRLKDLGGFPPLSD"
     gene            complement(1077..1484)
                     /gene="gloA"
                     /locus_tag="PXF40_001165"
     CDS             complement(1077..1484)
                     /gene="gloA"
                     /locus_tag="PXF40_001165"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HDL5802510.1"
                     /translation="MRILHTMLRVGDLERSIKFYTDVLGMRLLRRSENEQYKYSLAFL
                     GYADESESAVIELTYNWGVDKYELGTAYGHIALGVDDIYKTIEDVRAAGGKITREPGP
                     VLGGTTVIAFAEDPDGYKIEFIENKDAKAALGN"
     gene            1574..2389
                     /locus_tag="PXF40_001166"
     CDS             1574..2389
                     /locus_tag="PXF40_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802511.1"
                     /translation="MAHDHDSPSKLEISTHAALPMVLMLFIEMALNFYSAPKNSIFIS
                     PYLLAFFVTSLISFLVLWKGEICRGQASRLSFILPFLLIFAVGNFLYSIGFTPKHNPM
                     AVASIAAVFACLIYFRLPEDQTLYNTLMYCGLAISSIGIIQYLAIYWFELPSLFNGIR
                     ANNFAQVLLGILLAGWYLMLAKSRLDVFLKLLVKTALVVLILNYCWTAFVLYQHLQIM
                     PDMPLLSFIIYFAAQFVILLMLAWLLLGKNIKNPTAWTVATLLAILYPFANVV"
     gene            2393..3139
                     /locus_tag="PXF40_001167"
     CDS             2393..3139
                     /locus_tag="PXF40_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802512.1"
                     /translation="MKRALKFFGIATVLSVVAIYYFLMPSHYLATPINWILPKAWKVQ
                     LPQGLNLNWQGSSLAQFQLSYRDCPLLSADKTDLGWIEKNHLSVDKLDIDYRCLALFP
                     QNEHSNSDTSLNALLAVIPDGEATIHALNWKNLPTDFNPRLQRLFEQTAIKLSLSKGE
                     IQATAAQQAVKFAANFANGRLNADLSYQPNEKEQHNLRISAEIEDNFTQLPPTISAEY
                     DWQLSYEIIANKALQKGALFSVGKKMPHKS"
     gene            3325..5100
                     /locus_tag="PXF40_001168"
     CDS             3325..5100
                     /locus_tag="PXF40_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH domain-containing protein"
                     /protein_id="HDL5802513.1"
                     /translation="MPLKTAIRISLLSQNSWGKGNIVISNSDGEITEKGLNLPLRLTG
                     NIKHGNFILYSSVPLDFQGNFDDLSVKFLPSSLLRLTGKERYLTIEDLRFPLAGIKID
                     KHGIHGRLHAILRGQSPDFNNIEFHLDGQAQNFKAGALDFFQDPKDANAVKDSWKWRI
                     WGASILKAFNSKVNLSGRGQWHKQLVRLEELKGDLATVKLADTTISKITLNNTQAIRF
                     NVKKFTLDGAVMLQSPEIAFSYGGVLPKPRVNLAFDGEVEKLRFKGAVNTTELGPLKL
                     FARRQLSQDASQIIGKLYWPEQSAQGFQPLFPFRSQWVINNGTIRGETAFSAGSKNGL
                     IAGGHLAIRNGGLSLPNGEAKGIEFSLPYRYQNGRFHFGAKKPLDVKIAQIKLGDLAL
                     DNASMKLNGYYPYTKAKPLNLNQLSFDLFGGKLNVKRFALPQTELAYLNLERIDFEQI
                     LQFMQYQQIDLKGKANAILPFWLSGKPCYICDGLLTQAETSYLTFTPELLSEMQKSGY
                     TEQILLHLVDKSTINDFRSLINVGPKGDLVLDGKLKLSSNQNKSKVNLNYNHRENLFD
                     LWHLINYGSQFEQKLENYLYQKLER"
     gene            5118..5312
                     /locus_tag="PXF40_001169"
     CDS             5118..5312
                     /locus_tag="PXF40_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HDL5802514.1"
                     /translation="MKPATFYFAIFLLNLTACTPKVQLETPSEGITINMNVVVDHRID
                     VKMDEKSRAVITKSENKTKN"
     gene            complement(5309..5782)
                     /gene="folK"
                     /locus_tag="PXF40_001170"
     CDS             complement(5309..5782)
                     /gene="folK"
                     /locus_tag="PXF40_001170"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HDL5802515.1"
                     /translation="MQTVYIALGSNLENPLEQLKQAVEKLKKFANEFEISPFYGSKPV
                     GPQDQPDYVNAVAKFSTDLSPTALLDKLQSIENEQGRVRVRRWGERTLDLDIILYGNQ
                     QIQTERLNVPHIEMKNREFVIVPMFDLTPDLVLPTGEKLADIYAQFKDHQMIIFS"
     gene            complement(5985..7316)
                     /gene="pcnB"
                     /locus_tag="PXF40_001171"
     CDS             complement(5985..7316)
                     /gene="pcnB"
                     /locus_tag="PXF40_001171"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HDL5802516.1"
                     /translation="MLHKKFAVNASQYRISPKDFPKNAISIVDKLQIAGYEAYIVGGC
                     IRDLLLEKKPKDFDIATNARPEEIQRIFGRQCRLIGRRFRLAHIVYGREIFEVATFRA
                     GHESHRNDKISKVSDEGMLLRDNVYGTLREDAERRDFTVNALYYDIKRNLIFDFFNGI
                     EDLRAGKLSLIGEPTIRYQEDPVRMLRAVRFMAKLDMFLDKATASPIRDMAVLLTNIP
                     AARLFDESLKLLQTGAGLKTYQLLREYELWQFLFPVLPAFFTAKGDSYAERMITKALN
                     STDERIADKLPVNPAFLFAALLWYPLREKMEQLKNEGGFNSYDAMMLAANDVLAESCN
                     AIALHRRHTSVIRDIWALQFQMMKRSGNRPQQTLEHVKFRAGFDLLVMRAEIEGGDLV
                     ELSAWWHEYQFSNEGQRTELLKSVRHLGNVPSEKKKTRRRRTFKKKPKVNG"
     gene            complement(7561..8007)
                     /gene="dksA"
                     /locus_tag="PXF40_001172"
     CDS             complement(7561..8007)
                     /gene="dksA"
                     /locus_tag="PXF40_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HDL5802517.1"
                     /translation="MTQAAKTSLGLLALAGVEPYELKKDEEYMNEAQREHFTKILKAW
                     HSQIMEEAERTKSQLQEDMTNFADPNDRASQEEEFSLELRNRDRERKLLKKIEQTLYK
                     IQEDEYGYCETCGVEIGIKRLEARPTADLCIDCKTLAEIREKQLGL"
     gene            complement(8257..9210)
                     /gene="thiB"
                     /locus_tag="PXF40_001173"
     CDS             complement(8257..9210)
                     /gene="thiB"
                     /locus_tag="PXF40_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HDL5802518.1"
                     /translation="MKFILSSLALLSASVYANQPTLTVYTYSSFASEYGPAPKLEQNF
                     EKECGCDVKFVPLDDSVTMFNRLRLEGAKTKADVVVGIDNFLQPEAEKSGLFAEFEAK
                     TKLETQQKIFFPYDTGSYAFIYDKEKLKNPPKSLKELVERQDLKVIYQDPRTSSVGRG
                     FLMWVNQVYGDEAPTAWKTLAKHTVTVGKGWSETYGAFLKGESDLVLSYTTSPLYHKW
                     HENTDKYVAAPFEEGHLVQVENAAIVKSSQQKALANQFLEFLHKPESQHIISYHNVMN
                     PVLTDGVDPAFAAMPTYKTIEFTPPTTETIQKWLADWSKSW"
     regulatory      complement(9254..9397)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            9681..10667
                     /locus_tag="PXF40_001174"
     CDS             9681..10667
                     /locus_tag="PXF40_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HDL5802519.1"
                     /translation="MSQLIRTLKGHIRDEIIKKGGWVNAHAHADRAFTMTPEKITVYQ
                     NANLQQKWDLVDEVKRNSSVEDYYRRFSQAIELMISQGVTAFGTFVDIDQVCEDRAII
                     AAHKAREVYKNDIILKFANQTLKGVIEPNAKKWFDIGSEMVDMIGGLPYRDELDYGKG
                     LEAMDILMDKAKSLGKMLHVHVDQFNSPKEKETEQLCDKSIEHGMQGRVVAIHGISIG
                     SHPKEYRKMLYQKMRDSQMMVIACPMAWIDSGRKEDLQPFHNALTPADELIPEGITVA
                     IGTDNICDYMVPLCEGDMWQELSLLSAGCRFTNLEEMANIASINGRKVLGLV"
     gene            complement(10721..11140)
                     /locus_tag="PXF40_001175"
     CDS             complement(10721..11140)
                     /locus_tag="PXF40_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF937 domain-containing protein"
                     /protein_id="HDL5802520.1"
                     /translation="MLGNILGSLASSVLSGNNQSTATQLIQNLLASQGGIEGLIAKFQ
                     QGGLDDVLRTWISSDEDNAPVSGEQISNVFGQENIQNVAQEAGVDAADASDLLAQFLP
                     KIVDTLTPNGNVEDLKNFDANDLLAQAAKGILGNLFK"
     gene            complement(11218..11973)
                     /gene="kdsB"
                     /locus_tag="PXF40_001176"
     CDS             complement(11218..11973)
                     /gene="kdsB"
                     /locus_tag="PXF40_001176"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HDL5802521.1"
                     /translation="MKFTVIIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQLAGASR
                     VIIATDHPEIEALAQSFGAEVCMTSEKHNSGTERLAEVIEKMQIADSEIIVNIQGDEP
                     LIPPVIVTQVAQNLDAYQVNMATLGVKLATREELFNPNAVKVVADKNGMALYFSRASI
                     PFARDSFPDCDDSFVAAQGYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALW
                     HGEKIHIEPAKEAPQVGVDTPEDLERVRAILAR"
     gene            complement(11983..12936)
                     /gene="trxB"
                     /locus_tag="PXF40_001177"
     CDS             complement(11983..12936)
                     /gene="trxB"
                     /locus_tag="PXF40_001177"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HDL5802522.1"
                     /translation="MTTKHTKLLILGSGPAGYTAAVYAARANLNPVLVTGMQQGGQLT
                     TTDEIENWPGEFEQITGTELMNKMLKHAEKFETEIVFDHIHSVDLSKRPFTLNGDLYT
                     FTCDALIIATGASAKYLGLPSEEHFKGKGVSACATCDGFFYRNKPVAVVGGGNTAVEE
                     ALYLANLASEVHLIHRRDSFRAEKILLGRLQKRIEEGKIILHTDRTVDEVLGDNMGVT
                     GLRLKSTKEELSEEIKVDGFFVAIGHAPNTAMFEGQLELENGYIKVKSGLEGNATATS
                     VEGVFAAGDVMDHNYRQAITSAGTGCMAALDAERFLDAQEA"
     gene            13103..14173
                     /gene="dhaK"
                     /locus_tag="PXF40_001178"
     CDS             13103..14173
                     /gene="dhaK"
                     /locus_tag="PXF40_001178"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HDL5802523.1"
                     /translation="MKKLINSIETVLDEQLSGFVKAHSDLTLNTEPVYIYRTTPSNQP
                     KVALISGGGSGHEPMHAGFIGKGMLDGACPGAIFTSPTPDQMFECGLAVDRGEGVLLI
                     IKNYTGDVLNFETATELLADSGVKVATVLVDDDVAVKDSLYTAGRRGVANTVLIEKLL
                     GAAADKGYNLSELAKLGHQLNNNGHSIGIALSACTVPAAGKPSFTLAENEMEFGVGIH
                     GEPGIERRPFENLDSTVKQMFETLIAHGDYQRKIRHWNTQTQQWDEIEESKVALKKGD
                     RVIALVNNLGAVPLSELYAVYDALEKECQTFGLSIERSLVGSYCTSLDMQGISITLLK
                     VDEDILKLWDAPVNTPAMRWGE"
     gene            14194..14820
                     /gene="dhaL"
                     /locus_tag="PXF40_001179"
     CDS             14194..14820
                     /gene="dhaL"
                     /locus_tag="PXF40_001179"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HDL5802524.1"
                     /translation="MTISKQQILKWLENCQQVMTEKRDYLTELDTVIGDGDHGLNMQR
                     GFSKALEKAHTVQDKDIGTLLKTVGMTLLSQVGGASGPLYGSFFIKAAQGATGKEQLS
                     FNELLALLQQGAEAIVQRGHAQVGDKTMCDLWLPLLEDLAQADSTQPIAQILLQAVEK
                     AENFANQTAPLMAKKGRASYLGERSIGHKDPGATSSYYIFKALAEALQ"
     gene            14830..15237
                     /gene="dhaM"
                     /locus_tag="PXF40_001180"
     CDS             14830..15237
                     /gene="dhaM"
                     /locus_tag="PXF40_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HDL5802525.1"
                     /translation="MVNLVIVSHSAKLAEGVGEILAQMAQGGCKIALAGGIEDTSNPI
                     GTDAVKIMQAIESVFSPDGVIVFVDLGSAILSTQTAIDLLEPELAEKVIISYAPLVEG
                     AFAAVVAASAGDSLEAVLNEANEAAALKQEQAN"
     gene            complement(15277..16122)
                     /locus_tag="PXF40_001181"
     CDS             complement(15277..16122)
                     /locus_tag="PXF40_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone YbbN"
                     /protein_id="HDL5802526.1"
                     /translation="MDYFVNVNEQNFSEVWAAAAQVPTVFHFISPREVASLEMDALLR
                     RISDENPNQFLLATVNCDEQQALAAQFRIQQIPTLYLFAGGQPIDAIQGAVSEQELRI
                     RLANILPKEEELKFQQALELLQDQRYTEALPLLKSAWEMTDKKNSDFALLYAETYIAM
                     KSVEEAREILKAIPIQDRDSRWHGLQAQIELLEQASESPELQQLQADYANSKTPEIAI
                     KLANQLHQAHKNEEALTLLFDWLKSDLNVANGEVKSQFLAILSALGTDPIVPKFRRQL
                     YSLLY"
     gene            complement(16166..16492)
                     /gene="glpE"
                     /locus_tag="PXF40_001182"
     CDS             complement(16166..16492)
                     /gene="glpE"
                     /locus_tag="PXF40_001182"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HDL5802527.1"
                     /translation="METTFKEISPQQAWELIENEGAVLADVRDARRYVYSHPQDAFHL
                     TNQSYGKFLDEVDYDEPVVVICYHGVSSQSTAQFLIEQGFENVYSVKGGFEAWERNGL
                     PIETSY"
     gene            16643..17101
                     /gene="exbB"
                     /locus_tag="PXF40_001183"
     CDS             16643..17101
                     /gene="exbB"
                     /locus_tag="PXF40_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HDL5802528.1"
                     /translation="MEQLFQFLEHHTDFVILGLLGLLSVICLWKAIERIMFYSKVDIS
                     KYDTLEELDIDLTHNLTTISTIGSNAPYIGLLGTVVGILLTFYHLGQSGGDIDAASIM
                     VNLSLALKATAVGILVAIIAMVFYNGFGRKVEENKLKWLALQSKKPHQAV"
     gene            17138..17575
                     /gene="exbD"
                     /locus_tag="PXF40_001184"
     CDS             17138..17575
                     /gene="exbD"
                     /locus_tag="PXF40_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HDL5802529.1"
                     /translation="MKKFDEINIIPFIDIMLVLLAIVLVTASFISQGKIQVNVPKAST
                     TQPMKADDLAKLLTITENNEFFFNDQAITKEQLIAEVATWDKSQKVSLKVDGAVAFEK
                     FVELTDILSANEIKNVAIITKKETAPAPSSTPGSPAQVPAVAP"
     gene            17591..18502
                     /locus_tag="PXF40_001185"
     CDS             17591..18502
                     /locus_tag="PXF40_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HDL5802530.1"
                     /translation="MKKKHSRIGLLASLAIHTALIGGTFAWLHNHKVEKIAEQNSLSM
                     EMVAALLEQPQVAVAPDPITEEVKEIEPEKAEVPPEPKLTPEPTPEPEAIPDPTLNPK
                     KEKPKEEKRKERHHHKHKHRHKEKREELQEQEKPKDKPKERPKHHHKHIKALERGPEI
                     KQGIVAKAIPNAAEGEKVVAGVVGGQKNGSPNSTSTTGSANTGASSGNASELAAYKVA
                     LQRALQRKANNSYPQREKMMRKTGTVTIKFTITSSGSITNVSVLNSSGNSNLDNAAVR
                     SAEGLSMPPPPAGFPPTVTVPVRFALE"
     gene            complement(18571..19452)
                     /gene="cysZ"
                     /locus_tag="PXF40_001186"
     CDS             complement(18571..19452)
                     /gene="cysZ"
                     /locus_tag="PXF40_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HDL5802531.1"
                     /translation="MSSVFSEPQNQVGLGFHYFIYGWRLLLQRQFLPFVIFPILINTV
                     LMVGLIWGFFANIGGLLDMLLPSWLEWLSFVLIPLIFLMILVGFYFAFTTLANFVAAP
                     FNALLAEKVELQLTGEPLGDMSFGAMLKDVPRMLKREWQKMMYSIPRLIALFVLGFLP
                     VVGQTVAPVLTFIFGAWLIAIQYCDYPFDNHKISFQRMRNALSQSRTLNFTFGALVSL
                     FTMIPFVNLVVMPVAVCGATALWVKEYRNFFLNNQTGEFSKADYTFTKVNSTSLSTET
                     RTGEVSPNVRNGDIRKQ"
     gene            19564..20466
                     /gene="zipA"
                     /locus_tag="PXF40_001187"
     CDS             19564..20466
                     /gene="zipA"
                     /locus_tag="PXF40_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HDL5802532.1"
                     /translation="MELHIIFFILAGLLIAVLIGFSLWSARREKSNIFSNTFSTRPIA
                     VPPQNNKMSNSIPTSLQPQNEDYQAMSVPEENPQQIQQEVESSLQNIKISLPGGNPQQ
                     QPEQIQPIQSVAEPTVSTYGQKISNQQHIQYNTPDFANPMVNTVVEETPQAVAIEPQE
                     TQSAEEENPFVTLYLYAPQNEAFRGDFVVHYLEEVGLRFGEHQIFHRHQHIDDSLSPI
                     IFSAANLMNPGTFDLNNISNFATAGLVLFMQLPTEGNDVANMKLLISNAEHLAASLGG
                     FLYDDNQQPFGEESRQRYMQRVMH"
     gene            20531..22588
                     /gene="ligA"
                     /locus_tag="PXF40_001188"
     CDS             20531..22588
                     /gene="ligA"
                     /locus_tag="PXF40_001188"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HDL5802533.1"
                     /translation="MSLFNQTSLFEENATPELVEKIETIRQTLRQYEYEYHVLDNPSV
                     PDAEYDRLMNELKNLEWQHPELISADSPTQRVGAKPLAGFAQVTHEIPMLSLDNAFSD
                     EDLDGFLRRMESYITASPSQLEFCCEPKLDGLAVSILYENGILTRAATRGDGTTGEEI
                     TANIRTIRNIPLKLNTTNPPARLEVRGEVFMPQSGFNELNEKALAKGEKTFANPRNAA
                     AGSLRQLDPKITRQRPLVLNAYGIGVYESDDELPATHFERLQWLKSLGIPVNNEIRLV
                     QGKAALLAYYAEIQAKRPTLGYDIDGTVLKVNDIALQEQLGFISRSSRWAIAYKFPAQ
                     EEMTILKEVDFQVGRTGAITPVAKLEPVFVAGVTVSNATLHNGDEIERLGIVIGDTVI
                     IRRAGDVIPQITGVMLERRPENAKKIEFPTACPICHSAVTRVEGEAVARCTGGLFCEA
                     QRKEALKHFVSRKAMDIDGVGEKLIEQLMARELIETPADLFKLDHTTLMRLERMGEKS
                     AQNALNSIEKAKNTTLPRFLFSLGIREVGEATALNLANHFGSLEAIRQATFEQLKEVQ
                     DVGEVVANRIVSFWQEPHNVEVVEDLIAQGVRWENVVKAEIVDNPLKDKNVVLTGTLT
                     QLTRDEAKALLQSLGCKVSGSVSSKTDYLIAGEKAGSKLAKAQELGIQILSEQQFIEL
                     TQH"
     gene            complement(22651..23919)
                     /locus_tag="PXF40_001189"
     CDS             complement(22651..23919)
                     /locus_tag="PXF40_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5802534.1"
                     /translation="MTQQIEHSTWQSKFAAMGPGILMASAAVGGSHIIASTQSGAIYG
                     WQLAIIILLANLFKYPFFRFGVQYTLASGKTLLEGYKEKGKFYLIIFFILNVFAAMIN
                     TAAVAIVSAAILKFIFSALGIPLDLSIPMAGTIVIVVTWGILLLGQYKFLDTLSKWIM
                     IALTISTVSAVIIAALKGGVEIAPDFVEPSPWNLAALVFIVALMGWMPAPIEISAINS
                     MWVIAKKRLSKVNYEDGIFDFNVGYIGTAILAIVFLALGALVQYGSGEKVEQAGVAYI
                     AQLIKMYAFAIGDWSKLLIAFIAFMCMFGTTITVIDGYSRANAEALRLISGRKQHSQT
                     ELSIWMTVTALIGILIISQFMSDVAKMLQFAMISSFVSTPVFAWLNFSLVLKGEHRAK
                     GWLFWLAVIGLIYLTSFTLLFLAQQFKLIG"
BASE COUNT         7274 a         5213 c         4741 g         6774 t
ORIGIN      
        1 tagtttcagg atcatgttaa tcatttcaag gtggaaacgc ttgtttttag attagataaa
       61 aaataaggag ggtcgaaata gcgggtatac agaaagtgct tatagccaaa aaatagtcta
      121 ttgttattga atacaagcgg tctattttgt cacatttttg ccaaatttgg ttaaaaaacc
      181 aaccgcttgt aatcttaact gaagatagat agttttttat tttttctaca actctacagg
      241 gctggattta ttgcagaatg gtacttgcca ctaactatca tcactcccag gataatttat
      301 agaaacaata cgagaaattg tgttaataaa tgaaatgaat aacgttaatc cgataatggt
      361 gggaaaccac ctaaatcttt taaacgattg accattgcac agaaaagttc tgccgtgcgc
      421 tcggtatcat acaacgcaga atgcgcttgc ttaccgtcaa acgggatttt tgccacctgg
      481 caggctttta ccaacacggt ttgcccatac ataaaaccgg caagggtggc ggtgtcaaac
      541 atcgcgaaag ggtgaaaggg atctcgcttg gcattaattc gtttaatcgc agcctgtaaa
      601 aagccctgat cgaacgctgc attgtgggca acaatcaccg cccgttggca gccttgctcc
      661 ttcattgctt tgcgaaccat tttgaacatt tccggaatcg caatattctc cgcaaccgct
      721 cctcttagag ggttgtcaat atcaatgccg ttgaatttta atgactcagg gttaatattc
      781 gccccttcaa atggcgcaat atgaaaatgg cattgttgat ccggcactag ataaccttgc
      841 tcgtccattt ttaaagtaat tgccgccaat tccaataagg catcagtttg ggcatttaag
      901 cctgctgttt ccacatcaat cacaaccggt aaatagccac gaaaacgatg ctttaataat
      961 ttataatcta tttgttccgt tgtctgttcc atttatctat caacctaaaa tacaagcggt
     1021 ctgatttgca aaatttttta caaatccgac cgcttgaata ttcatattcg caaaaattag
     1081 tttcctaacg ctgctttcgc atctttattc tcaataaatt cgattttata accgtccgga
     1141 tcttcagcaa aggcaatcac agttgttcca cccaataccg ggcccggctc acgggtaatt
     1201 ttaccgcctg ccgcacgcac atcttcaatg gttttgtaaa tatcatctac gcctaacgca
     1261 atatggccat aagccgtgcc tagctcatat ttatccacac cccagttata agtcagctca
     1321 atcaccgcac tttcgctttc atcggcatag cctaaaaatg ctaacgaata cttatactgc
     1381 tcgttctcgc ttctacgtaa cagacgcata cctaacacat cggtataaaa cttaattgag
     1441 cgctctaaat ctccaactcg taacattgta tgtaaaattc gcatattttc ttccccctga
     1501 agttaaaaaa cgacccctat tatggcataa tcttggctta aaatcatttt ctttatacct
     1561 tttgggatta tctatggctc acgatcacga ttcgccgtca aaacttgaaa tttcaaccca
     1621 cgctgcactg ccaatggtat taatgctgtt tattgaaatg gctcttaact tctactctgc
     1681 accgaaaaat tcaattttta tttctcctta cttattggcg tttttcgtga cctcattaat
     1741 cagtttttta gtgctatgga aaggcgaaat ctgccgaggg caagccagcc gtttaagctt
     1801 tattttaccc tttttactta ttttcgccgt agggaatttc ctttattcca taggctttac
     1861 gccaaagcat aacccaatgg cggtggcaag cattgctgca gtttttgcct gcttaatcta
     1921 cttccgcctg ccggaagatc aaaccttata taacacattg atgtattgtg gtttggctat
     1981 atcaagtatt ggtattatcc aatatttagc catttattgg tttgaactgc cttcattgtt
     2041 taacgggatt cgagccaaca atttcgccca agtgctgtta ggcattttat tagccggctg
     2101 gtatttaatg ttagcgaaaa gccgtttaga tgttttcctc aaactgttgg tgaaaaccgc
     2161 ccttgtggtg ctgattctca attattgctg gacagctttt gtgctttatc aacatctaca
     2221 aattatgccg gatatgccat tgctttcatt tatcatctat tttgcagcac aatttgtgat
     2281 tttattgatg ttggcgtggt tattacttgg aaaaaacatc aaaaatccga ccgcttggac
     2341 agttgctacg ctgttagcga ttttataccc tttcgctaat gtagtctgat ttatgaaacg
     2401 ggcattaaaa tttttcggca ttgcaaccgt tctatctgtt gtggcaatct actatttttt
     2461 aatgcccagc cactatcttg ccacgccgat taactggatt ttgccgaaag cgtggaaagt
     2521 tcaactccca caaggcttaa acctgaattg gcaaggctca tcacttgctc aatttcaact
     2581 ctcttatcga gattgcccgc tactaagtgc cgataaaacc gatttgggtt ggattgagaa
     2641 aaaccatctt tctgtcgata aattggatat tgattaccgc tgccttgcct tgtttccaca
     2701 aaatgaacac agcaattccg acacttcact caacgcattg ctggcggtca ttcctgatgg
     2761 cgaagcgact atccacgccc ttaactggaa aaatttgcct accgatttca acccaagact
     2821 tcagcggctt tttgagcaaa cagctattaa actctcactt tcaaaaggtg aaattcaggc
     2881 aactgccgct caacaagcgg tcaaatttgc agcaaatttt gcaaatgggc ggttgaatgc
     2941 cgatttatca tatcaaccga atgaaaaaga acagcataat cttaggattt cagcagaaat
     3001 tgaggacaat tttacccaac tgccgcccac tatttccgct gaatatgatt ggcaattatc
     3061 ttatgaaatc atcgccaata aagccttgca aaagggcgct ctattctcag ttggcaaaaa
     3121 aatgccgcac aaaagttaga aggcaactgg caggttgaac ttgccgaaag tgaaaataac
     3181 aaactggatt tcccttttct gtttgatggg gaaagcctag aaattcaaca agggcggttt
     3241 gattggcact ttacccaaca atttccactg caagggtttg ttagcaccaa gctcacaccg
     3301 aaatcattca accaaaacgg ctttttgcca ctcaaaacgg cgattcgtat cagcctgctt
     3361 tcccaaaaca gttggggtaa aggcaatatt gtaatctcca attcagacgg agaaataacc
     3421 gaaaaagggc tgaatttacc gcttcgtttg acgggtaata tcaaacacgg caattttatt
     3481 ctttacagta gcgtgccact ggattttcaa ggtaattttg acgatttaag cgtaaaattt
     3541 ttgcctagct ccctacttcg tttgaccgga aaagagcggt atttaaccat tgaagattta
     3601 cgttttccac ttgccggaat taaaattgac aagcacggta ttcacggacg actgcacgca
     3661 attttaagag ggcaaagccc tgattttaac aatatcgagt tccatttaga cggacaagca
     3721 caaaatttta aggctggagc cttagatttt ttccaagatc ctaaagatgc taacgcagta
     3781 aaagacagtt ggaaatggcg aatttgggga gcatctatcc tcaaagcctt caacagtaaa
     3841 gtgaatttaa gcggcagagg gcaatggcat aaacagcttg tgcggttgga agaactcaaa
     3901 ggcgatttag ccaccgtaaa gttagcagat acaaccattt ctaaaatcac gcttaacaat
     3961 acgcaagcta ttcgatttaa tgtcaaaaaa ttcacccttg acggagcggt aatgttgcaa
     4021 tcacctgaga ttgccttcag ttatggcggt gtgctaccca aaccacgagt gaatctcgcc
     4081 tttgatggtg aagtcgaaaa actacgtttt aaaggagcgg tgaataccac cgaactcggc
     4141 ccactcaaac tgttcgcccg ccgccaatta agccaagatg ccagccaaat tatcggcaaa
     4201 ctttattggc cggagcaatc tgctcaaggc ttccagccgc tttttccgtt tcgtagccaa
     4261 tgggtgatca acaacggtac aattcggggc gaaacggcgt ttagtgccgg cagtaaaaac
     4321 gggctgattg ccggtgggca tttagccatt cgtaacggcg gtttatcttt acctaatggc
     4381 gaagcaaaag ggattgaatt ttcgcttccc taccgctacc aaaacggacg ctttcatttc
     4441 ggagccaaaa aaccgcttga tgtaaaaatt gcccaaatca aactggggga tttagcatta
     4501 gataacgctt caatgaaact caacggttac tacccttata ccaaagctaa gccattgaat
     4561 ttaaatcaat tatcctttga tttgtttggc ggtaaactga atgtaaaacg ctttgcctta
     4621 ccacaaaccg aactggctta cctgaattta gagcggattg actttgagca aattttgcaa
     4681 tttatgcaat atcagcaaat tgatctcaaa ggcaaagcca acgctatctt gccgttttgg
     4741 ttaagcggaa aaccttgcta tatttgcgat ggcttactga cacaggcgga aacttcctat
     4801 ttaaccttta cccctgaatt gttgtcagaa atgcagaaaa gtggttacac cgagcaaatt
     4861 ttgttacatt tagtagataa aagcacgatt aacgattttc gcagtctgat taatgtcggg
     4921 ccgaaaggcg atttagtatt agacggaaaa ttaaaattat cttccaatca aaataaatca
     4981 aaagtgaatt taaactataa tcaccgagaa aatctgtttg atttgtggca cttaattaac
     5041 tatggctcac aatttgaaca aaaattagaa aattacctct atcaaaaact ggaacgatga
     5101 taaagaatgg aataaatatg aaaccggcca cattttattt tgcaatattt ttactgaatt
     5161 tgaccgcttg tacgccgaaa gtacagcttg aaacgccaag tgaaggcatt acgattaata
     5221 tgaatgtggt cgttgatcac cgcattgatg tgaagatgga cgagaaatcc cgagcggtga
     5281 tcaccaaaag tgagaacaaa acgaaaaatt agctgaagat aatcatttga tgatctttaa
     5341 attgtgcata aatatcggct aatttttccc ctgtcggtag tactaaatca ggcgttaaat
     5401 caaacatcgg cacaatcaca aattcccgat ttttcatctc gatatgcggc acgttcaaac
     5461 gctcggtttg aatttgctga ttgccgtaca aaataatatc cagatctaaa gttctctccc
     5521 cccaacggcg tacacgcact cttccctgct cattttcaat gctttgcaat ttatccagca
     5581 atgcagtggg cgataggtcg gtactaaatt ttgctaccgc attgacataa tcaggctgat
     5641 cttgcggtcc gacaggcttt gagccgtaga acgggctgat ttcaaactca tttgcaaatt
     5701 tttttaattt ttcgaccgct tgtttaagct gctcaagcgg attctcaagg tttgatccta
     5761 aggcgatata gacggtttgc ataaaatata cttacaaata taacaataaa ctctctcccc
     5821 ttgtgggaga gagaccgctt atgagcgttc agcgaaataa gcagagagag gggacaagcg
     5881 gtaactttta ttaaattttt tacacatttc ccctctccct gatttttctt ctgaacgaag
     5941 aaaaatcgct ccctctccca caaggggaga gggaaatata ttaattatcc atttactttc
     6001 ggttttttct taaaggttct acggcggcgt gttttctttt tctcgctagg cacattgcct
     6061 aaatgacgaa ccgatttcag caattcagta cgctgacctt cattgctaaa ttggtattcg
     6121 tgccaccaag cggaaagttc gaccaaatcg ccgccttcaa tttctgcacg catcactaat
     6181 aaatcaaacc ctgcacggaa tttgacgtgt tcaagggttt gttgcggtcg gttgccactt
     6241 cgtttcatca tctgaaattg caatgcccaa atatctcgaa tgactgaagt gtgtctgcgg
     6301 tgcaacgcaa tcgcgttgca actttccgcc agcacatcat ttgctgccag catcattgca
     6361 tcgtagctgt tgaagccacc ttcgttttta agctgctcca ttttctcccg gagcggatac
     6421 caaagtagtg cagcaaataa aaacgcagga tttaccggta atttatcggc aattcgctca
     6481 tcagttgaat ttaacgcttt ggtaatcatt ctttcggcat aggaatcacc tttggcagta
     6541 aaaaatgccg gcaataccgg aaacaagaat tgccatagtt catattcacg caaaagctga
     6601 taagttttca gccctgcacc ggtttgtaat aatttgagtg attcgtcaaa caaacgggct
     6661 gccggaatgt tggttaacaa caccgccata tcccgaattg gggaggccgt ggctttatcc
     6721 aagaacatat ccaacttcgc cataaaacga acggctcgca acattctcac cggatcttct
     6781 tggtaacgaa tagtaggctc tccgataagc gaaagtttac ctgctcgtaa gtcttcaata
     6841 ccgttgaaga aatcaaaaat aagattgcgt tttatatcgt aatataaggc gtttacggtg
     6901 aaatcacggc gctctgcatc ttcacggagc gtgccgtaaa cattatcacg cagtagcatt
     6961 ccttcatcgc tgactttaga aattttgtca ttgcgatgag attcgtgtcc tgcacggaaa
     7021 gtcgccactt caaaaatttc acgcccgtaa acaatgtgtg ccaaacggaa acgacgtccg
     7081 attaatcggc attgcctacc aaaaatacgc tgaatttctt caggtctcgc attagtcgca
     7141 atatcgaaat ctttaggctt tttctccaag agtagatctc gaatacagcc acccacaata
     7201 taagcttcat aaccggcaat ctgcaattta tcgacaatcg aaatcgcatt tttaggaaaa
     7261 tccttcgggc taattctata ttggctggca ttcaccgcaa atttcttgtg taacaaatgg
     7321 gagggaggat tatcttgttg tttcttccca cctctataag tcttttggtc cgttaagttc
     7381 ggggctgggc gtttagaacg ggaagttttg ggttctcttt ccgctctttt ttcactctct
     7441 accttttcat ttttctgagc cgacttttta ggcttggaaa ataatgattt aatataatta
     7501 aaaataatac acctctaaat agtaaatgcc tcttaaaaaa gaggcaccct gtaaagttga
     7561 ttataagcct agctgctttt ctcgaatttc agctaaagtt ttacagtcaa tacataaatc
     7621 agctgttggg cgtgcttcta aacgtttaat cccaatttct acgccacagg tttcgcaata
     7681 accatattca tcttcttgga ttttatacaa ggtttgctca atttttttca ataatttgcg
     7741 ttcacgatca cggttacgaa gctctaaact gaactcttct tcttgactgg ctcggtcgtt
     7801 cggatcggca aagttagtca tatcttcttg aagctggctt ttggtacgct ccgcttcttc
     7861 cataatttga ctgtgccacg ctttcagaat tttggtgaaa tgctcacgtt gagcttcatt
     7921 catatattct tcgtcttttt taagctcata aggctcaacg cctgctaatg ctaataaacc
     7981 gagtgaggtt ttagccgctt gagtcataga tatttactcc ttgttccctg tttattggaa
     8041 gttttattgt taaaattatt gcccgaatac agactaactt ccttgtaacc gcactatacg
     8101 aaaaaatcaa catcttcggg ttttaaataa tggcggctat aaataacaca aaaacgactc
     8161 attaatcaaa tgaatttgca aaaattttgc attcaaattg atttgattgc acaaaaaaat
     8221 agccgaacat ccattcggct atttttcaaa cactttttac cagctctttg accaatcggc
     8281 taaccatttt tggatagttt cagtagtcgg tggcgtaaat tcaatggttt tataggttgg
     8341 cattgccgca aaagccggat caacgccgtc ggttaaaacc ggattcatta cgttgtggta
     8401 agaaataata tgttgcgatt ccggtttgtg caaaaattca agaaattgat ttgccaatgc
     8461 tttttgttgg ctgcttttga caatagccgc attttctact tgcaccaaat gcccttcctc
     8521 aaacggagca gccacatatt tatcggtgtt ttcgtgccac ttatgatata aaggcgatgt
     8581 agtatagctt agtaccaaat ccgactcgcc ttttaagaac gctccataag tttcagacca
     8641 acctttgcct accgttaccg tatgttttgc caatgttttc caagcagttg gagcttcatc
     8701 gccatacact tgatttaccc acattaagaa gccccgccca acgctgctgg tacgtgggtc
     8761 ttggtaaatc acttttaaat cttggcgttc caccaactct tttaaacttt ttggtggatt
     8821 tttcagcttc tctttatcgt aaataaaagc ataagaaccc gtgtcataag ggaagaaaat
     8881 tttctgttgg gtttctaatt tggtctttgc ttcaaactcg gcaaacaagc cacttttttc
     8941 ggcttcaggt tgcaggaaat tatcaatacc gaccaccaca tcagctttgg tttttgctcc
     9001 ctccaaacgc aagcggttga acatcgttac gctatcgtca agcggaacaa atttgacatc
     9061 acagccacac tctttctcaa aattctgctc taatttagga gcaggtccat attccgaagc
     9121 aaacgagctg taagtgtaaa cggttaaggt cggttgattg gcataaacac ttgcacttaa
     9181 taacgcaagt gaagagagga taaatttcat aacaattcct tctaaattaa atgaatagaa
     9241 ggatttaaga aaggcaagtt gctatctcaa atccctacgc tgatattaat cagatcaggt
     9301 tctatgggta tttctcagcc acaagcggtt aaatttcggc aaaaatttgc aaatttttac
     9361 gcaaaaacaa ccgcttgttg caccccaatg agaacggctt cattgtaaaa agtttgcagg
     9421 cagatttcaa ccaaagcaaa cgtttgctat ttgtattaaa aatccgtata ctaccgccct
     9481 agtccaaaca aggaactaga aatgaattgc acaacatcgg ttaaatcaaa ttcccaacag
     9541 ctacgcttca actttagagg cgtagctgtt tttctattca tttcaaacca ttcaaaatcg
     9601 ctgttatagc gatttttttt cgcacgcttg caattaccgc aagcggttga gccacattaa
     9661 cagagagaaa aggaataaaa atgagccaat tgattcgtac cctaaaagga catattcgtg
     9721 atgaaatcat caaaaaaggc ggttgggtaa atgcacacgc ccacgcagat cgtgcattta
     9781 cgatgacgcc tgaaaaaatc accgtttacc aaaatgcgaa tctacagcaa aaatgggatt
     9841 tggtcgatga ggtaaaacgt aattcaagcg tagaagatta ctaccgccgc ttttcccaag
     9901 cgattgaatt gatgatttca caaggggtaa cggcatttgg tacttttgtg gatatcgacc
     9961 aagtatgtga agacagagcc attattgccg ctcacaaagc ccgtgaagta tataaaaacg
    10021 acatcatctt gaaatttgct aaccaaacgt tgaaaggcgt gattgaaccc aatgcgaaaa
    10081 agtggttcga tatcggctcg gaaatggtgg atatgattgg tggcttgcct taccgtgacg
    10141 aactggatta cggcaaaggc ttggaagcaa tggatatttt aatggataaa gccaaatcgc
    10201 tcggcaaaat gctccacgtc cacgttgatc aatttaactc acctaaagaa aaagagaccg
    10261 aacaactgtg tgataaatcg attgagcatg gtatgcaagg gcgagtggtt gccattcacg
    10321 ggatttccat cggctcgcac ccgaaagaat atcgaaaaat gctttaccaa aaaatgcgtg
    10381 atagccaaat gatggtcatt gcctgtccga tggcgtggat tgatagcgga cgtaaggaag
    10441 atttacaacc gttccataac gctttaaccc ctgctgatga actcattcct gaaggcatta
    10501 ctgttgctat cggcacagat aatatctgtg attatatggt accgctttgc gagggcgata
    10561 tgtggcaaga actcagcctt ttatcagcag gctgtcgttt tactaaccta gaagaaatgg
    10621 caaatattgc cagtatcaat ggtcgaaaag tactgggttt agtctaactg aataaacgaa
    10681 aggcgaaccc taggttcgcc tttaataaca gcataaccga ttatttaaac aagttaccca
    10741 aaatcccttt tgccgcttga gctaataagt catttgcatc aaagtttttt aagtcttcaa
    10801 cattaccatt cggggttaaa gtatccacga tttttggcaa gaactgggct aataaatcgc
    10861 tcgcatcagc agcatcaaca cccgcttctt gagccacatt ttgaatgttt tcttgcccga
    10921 acacattact gatttgttcg cccgaaacag gtgcattgtc ttcatcgctg ctgatccaag
    10981 tgcgtaacac atcatctaat ccgccttgtt ggaatttggc aatcagccct tcaatcccac
    11041 cttgtgaggc gagtaaattt tgaattaatt gagttgcagt tgattggtta ttgccactca
    11101 atactgaaga agccaatgaa cctaaaatat ttcctaacat aatttctcct atgcaagcgg
    11161 tacaattttg cgaaaatttt gcaaaaaaac agcaaacttc gaccgcttgt aatcacttta
    11221 acgagctaaa atggctcgca ctctttccaa atcttccggc gtatccaccc ccacttgcgg
    11281 ggcttctttc gccggttcga tatgaatttt ttcaccgtgc cataaggctc ttagttgctc
    11341 aagggactca agctgttcta attgtgtcgg ctgccacgcc acatattgtt tcacaaaacc
    11401 ggctcggtaa gcgtaaatgc cgatatggcg taaataacct tgagcggcaa caaaactgtc
    11461 atcacaatcc ggaaaactgt ctctggcaaa cggaatgctg gctcgggaaa aataaagtgc
    11521 cattccgttt ttgtctgcca ccactttcac cgcatttggg ttaaatagct cttctcgggt
    11581 cgctaatttc acaccgagtg ttgccatatt gacttgataa gcatctaaat tttgagctac
    11641 ctgagtaaca attaccggtg gaatcagcgg ttcatcaccc tgaatattca caataatttc
    11701 gctgtcggca atctgcattt tttcgatcac ttccgccaaa cgctcagtgc cggaattgtg
    11761 tttttccgaa gtcatacaga cttccgcccc aaaagattga gcgagggctt caatttcagg
    11821 gtgatcggtg gcaataatca cacggcttgc accggcaagc tgagcttttt cccaaacgtg
    11881 ttgaatcatc ggtttgcctg caatatccaa caacggctta cgaggcaaac ggctggaagc
    11941 gtaacgagca ggaataatta cagtgaattt cataggctat ccttatgctt cttgagcatc
    12001 taagaaacgt tctgcatcca gggctgccat acaacctgtg ccggcagagg taatcgcttg
    12061 gcgatagtta tgatccatca catcaccggc agcaaatacg ccttccacag aagtggcagt
    12121 agcattgcct tccaaacctg atttcacttt aatgtagccg ttttcaagtt ctaattgacc
    12181 ttcaaacatt gccgtattcg gtgcgtgccc aatcgccaca aagaaaccat caaccttaat
    12241 ttcttcgctc aattcttctt tggttgattt taaacgtaag ccggtaacgc ccatattatc
    12301 gcctaacacc tcatcaaccg tacggtctgt gtgcagaata attttgcctt cttcaatacg
    12361 tttttgcaga cgaccaagca agattttttc agcacggaag ctatcacggc ggtgaattaa
    12421 atgcacttca cttgccaaat ttgccaaata aagtgcttct tccacagcag tattcccacc
    12481 accgactacc gcaaccggtt tattgcgata gaagaaacca tcacaagttg cacaagccga
    12541 cacgcctttg cctttgaaat gctcttcaga aggcaaacct aaatatttcg ccgacgcacc
    12601 ggtggcaata attaacgcat cacaggtgaa agtgtataaa tctccgttta gcgtgaatgg
    12661 gcgtttagat aaatccactg aatgaatatg atcaaacacg atttcagttt caaatttttc
    12721 agcgtgcttg agcattttgt tcattaactc tgtgccggta atttgttcaa attcccccgg
    12781 ccagttctcg atttcatcgg ttgtagtgag ctgtccgcct tgttgcatac cggtgactaa
    12841 aaccgggttt agattggcac gggcggcata aacagcagcg gtataaccgg caggccctga
    12901 gcctaaaatt aaaagtttgg tgtgtttagt ggtcataatg aatcctctga ataaatatta
    12961 atgtttattt tagcctaaat ttcagttcaa ctctattttc gttttcgctc aacttttttc
    13021 aattttgtga caaagttaac agaaatccga ctgtgtttct tgtaaattgt gacagtctaa
    13081 ttcatttaaa aggggcaaaa agatgaaaaa attaattaat tcaatagaaa ccgtcttaga
    13141 tgagcaactt tctggttttg tgaaagcaca ttctgattta acacttaaca cagaacctgt
    13201 ctatatttac cgcacaacgc caagtaatca acctaaagta gcccttattt ccggtggtgg
    13261 gagtgggcac gagccaatgc acgccggttt tatcggtaaa ggaatgttag acggagcttg
    13321 ccccggagca atctttacat ctccaacgcc ggatcaaatg tttgaatgcg gtttagcggt
    13381 tgatcgtggc gagggtgtat tgctaattat taaaaactat accggtgatg tgctgaattt
    13441 tgaaacagcc accgagctac ttgcagatag cggtgtaaaa gtcgcaaccg tgttggttga
    13501 tgatgatgtg gcagtcaaag acagtttata tactgccggc cgccgcggtg ttgcaaatac
    13561 agtattaatt gaaaagctgt taggagctgc agcggataaa ggctataact tatccgaatt
    13621 agccaaatta gggcatcagt taaacaataa cgggcattct atcggaattg ccttatctgc
    13681 ttgtactgtg ccggctgccg gtaagccatc atttacttta gctgaaaatg agatggaatt
    13741 tggggtaggt attcacggag aaccgggcat tgaacgtcgc ccctttgaaa atctggatag
    13801 taccgtgaaa caaatgtttg agaccttaat tgctcacggc gattatcaac gtaaaattcg
    13861 ccattggaat acacaaaccc aacaatggga cgaaatcgaa gaaagcaaag tggcattgaa
    13921 aaaaggtgat cgtgttattg ctttagttaa taacttagga gcagtgccac tatccgaact
    13981 ttatgctgtt tatgatgcgt tagaaaaaga gtgccaaact ttcggcttaa gcattgaacg
    14041 cagtcttgtt ggatcatatt gcacctcgct ggacatgcaa ggtatctcta tcacattact
    14101 gaaagttgat gaggatattc tcaaactatg ggatgctccg gtaaatacac cggcaatgcg
    14161 ttggggtgaa taattagatt gaaaggataa gttatgacaa tatcaaaaca acagatctta
    14221 aaatggcttg aaaattgcca acaggtaatg actgaaaaac gggattattt aaccgaattg
    14281 gataccgtta ttggcgatgg cgatcacggt ttaaatatgc agcgtggatt tagtaaagca
    14341 cttgaaaaag cccataccgt gcaagataaa gatatcggca ccctgcttaa aaccgttgga
    14401 atgacattat tatcgcaagt agggggagcg agcggccctc tctatggttc attttttatt
    14461 aaagcggctc aaggtgctac aggcaaagag caactgagct ttaacgagtt actggcactt
    14521 ctacagcaag gagcagaagc tatcgtacaa cgtggacacg cacaagttgg cgataaaacg
    14581 atgtgtgatt tatggctgcc attactcgaa gacttagctc aagccgatag cactcaacca
    14641 attgctcaaa tcttattaca agcggtcgaa aaagcagaaa attttgcaaa tcaaaccgct
    14701 ccattaatgg cgaaaaaagg gcgtgccagt tacttgggcg aacgcagtat cgggcataaa
    14761 gatccgggag caacgtccag ctactatatt tttaaagcct tagctgaagc attacagtag
    14821 gaggggtaaa tggttaattt agtgattgtt tcacatagtg ctaaactggc ggaaggcgtg
    14881 ggggaaattt tggctcaaat ggcacagggg ggctgtaaaa tcgcccttgc cggcggcatt
    14941 gaggatacct caaatcctat cggcactgat gcggtaaaaa taatgcaagc gattgaatcg
    15001 gtatttagcc cagacggtgt gattgtgttt gtcgatttag gcagtgcaat tttaagtacc
    15061 caaaccgcca tagatttact ggagccggaa cttgccgaaa aagtgatcat tagctacgct
    15121 cctttagttg aaggtgcttt tgctgctgta gttgcagcct ctgccggcga tagtttagaa
    15181 gcggtattaa atgaagcgaa cgaagccgct gctcttaagc aggaacaagc caattagtaa
    15241 aaatgccgta tcgaaaaata cggcatttta gttttattag tacaatagtg aataaagctg
    15301 tcttctaaat ttcggcacaa tcgggtctgt acccagtgca gataagattg ccagaaattg
    15361 gctttttacc tcgccgttcg ctacatttaa atccgatttt aaccaatcaa aaagtaacgt
    15421 gagtgcttct tcatttttat gagcttggtg tagctgattt gccaatttaa tcgcaatttc
    15481 aggggttttg ctgttcgcat aatccgcttg aagctgttgt aattcgggcg attcgctggc
    15541 ttgttccaat aattcgattt gggcttgcaa accgtgccaa cggctgtctc tgtcttgaat
    15601 cgggatcgct ttaaggattt cacgagcctc ttccacgctt ttcattgcaa tgtaagtttc
    15661 ggcatagagc aaagcgaaat cgctgttttt cttatcggtc atttcccacg ctgatttcag
    15721 cagcggcaag gcttcggtat aacgctgatc ttgcaataat tccaaggctt gttgaaattt
    15781 cagctcttcc tctttcggta aaatatttgc caaccgaatc cgtaattcct gctcacttac
    15841 tgcaccttga attgcatcaa tcggctgacc gccggcaaac aaatagagcg ttggaatttg
    15901 ttgaatgcga aattgagcag ccaatgcttg ttgctcatca caatttaccg tcgccaataa
    15961 aaattggtta gggttttcat ccgaaatacg acgtagtaag gcatccattt ccaatgaagc
    16021 cacttccctt ggcgaaataa aatgaaacac cgtcggcact tgtgccgctg ctgcccatac
    16081 ttcactaaaa ttctgctcgt ttacatttac aaagtagtcc atacaaaacc ttcttaagct
    16141 aaaaattact ttttatattg tagcattaat aagaagtttc aataggtagc ccgtttctct
    16201 cccacgcttc aaaaccacct tttacactat aaacattctc aaacccttgt tcgattaaaa
    16261 actgtgctgt actttggcta ctcactccgt gatagcaaat cacaaccacc ggttcgtcat
    16321 aatcgacctc gtctaaaaac ttaccataac tctggttggt taaatgaaac gcatcctgtg
    16381 ggtggctgta aacataacgg cgggcatcac gcacatcggc aagcaccgca ccttcgtttt
    16441 cgattaattc ccaagcctgt tgcgggctaa tttctttaaa tgtagtttcc ataatcactt
    16501 tccctcaaaa aacgtgcaac tataccataa aattctaaaa agaatggcta ttattccaag
    16561 ttgaaaattt gatgtttgtc agatataatt gcaaactatt ttcaaatgca ctgatttaaa
    16621 actaccacag tttgaggatt ttatggagca attatttcaa tttttagaac atcatactga
    16681 ctttgttata ttaggattac taggcttatt aagcgtaatc tgcctttgga aagctattga
    16741 acgtattatg ttttattcca aagtagatat ttcaaaatac gataccctcg aagaattaga
    16801 catcgattta acccacaatt taactaccat ttcgactatc ggctctaatg ccccttatat
    16861 cggcttatta ggaaccgttg tcggtattct tttaactttc tatcatttag gtcaatcagg
    16921 tggtgatatt gatgcggcct ctattatggt aaacctttct ttagctctaa aagccactgc
    16981 tgtcggtatc ttagtggcaa ttattgcaat ggttttctac aatggttttg gtcgtaaagt
    17041 ggaagaaaac aaactgaaat ggttggcatt acaatcaaaa aagcctcatc aagcggtgtg
    17101 atttagtcca ttttttgcaa attaataagg cagaacaatg aaaaaattcg atgaaatcaa
    17161 catcattcca tttattgata ttatgttggt attactggct atcgtgttag ttaccgcctc
    17221 tttcatttct cagggtaaaa tccaagtaaa tgtaccgaaa gcaagtacaa cacagccaat
    17281 gaaagcagac gatttagcga agcttttaac cattaccgaa aataatgagt ttttctttaa
    17341 tgatcaagca ataactaaag agcaattaat tgctgaagtt gccacttggg ataaaagcca
    17401 aaaagtgtca ctcaaagttg atggtgcagt cgccttcgaa aaatttgtgg aattaaccga
    17461 tatcctttct gcaaatgaaa ttaaaaatgt agcaatcatt actaaaaaag aaactgctcc
    17521 agcaccttca agcacacctg gtagccctgc acaagtgcca gcagtcgcac cttaaatagg
    17581 gtaaacaggt atgaaaaaaa aacattctcg tatcggctta ttggcatctt tggctattca
    17641 cactgcctta attggtggca cttttgcttg gttacataac cacaaagtgg aaaaaattgc
    17701 cgagcaaaac tctctttcta tggaaatggt ggcagcatta ttagagcaac ctcaggttgc
    17761 cgttgctccg gatcctatta ccgaagaggt caaagaaatc gaaccggaga aggcagaagt
    17821 accacctgaa cctaagctta ctccggagcc aactccagag ccggaggcaa ttccagatcc
    17881 tacgctaaat ccgaaaaagg aaaaaccgaa agaagaaaag cgtaaagagc gacaccacca
    17941 taaacataag catcgtcaca aagagaaaag ggaagagcta caagagcaag aaaaaccgaa
    18001 agataagcct aaagagcgcc cgaaacatca tcacaagcat attaaagcat tagagcgcgg
    18061 gccagagata aaacaaggta ttgtcgctaa agcgattcca aatgcggctg aaggtgaaaa
    18121 agtggttgcg ggggttgttg gagggcaaaa aaacggttca ccaaattcaa cctcaactac
    18181 aggttcagca aatactgggg ctagcagtgg taatgccagt gaacttgctg cttataaagt
    18241 cgcattacag cgagcattac agcgtaaggc gaataactct taccctcagc gtgaaaaaat
    18301 gatgcggaaa accggtacag ttacgattaa atttaccatt acatcgtccg gttcaattac
    18361 aaatgtatcc gtactcaatt catcgggaaa tagtaattta gataacgctg cggtacgcag
    18421 tgcagaaggt ttgagtatgc ctccgccacc ggcaggcttc cctcctacgg taacagtacc
    18481 ggtaagattt gcccttgaat aaaaacagcc ctcaaaagca atgtactttt gagggctttt
    18541 tattgcaaaa aattgactaa aaatgaccgc ttactgcttg cgaatatcgc catttctcac
    18601 attcggactc acttcacccg tacgagtttc tgtgcttaac gaggtagaat ttactttcgt
    18661 aaaagtataa tccgctttgc tgaattcacc tgtttgatta tttaagaaga aattgcggta
    18721 ctcttttacc cataatgccg ttgcgccaca aactgccaca ggcataacta ctaaattcac
    18781 aaatggaatc atcgtgaata ggctcactaa agcaccaaag gtaaaattta aagtgcgaga
    18841 ctgcgacaac gcatttcgca tacgctgaaa actgatttta tggttatcaa acggatagtc
    18901 acaatattga atggcgatca accaagcacc gaagataaaa gtcagcacag gtgctacggt
    18961 ttgcccaacc acaggcaaaa agcctaatac aaaaagagca atcagccttg gaatgctata
    19021 catcattttt tgccattctc gtttcagcat tcgaggcaca tcttttaaca ttgcaccgaa
    19081 tgacatatcg cccaaaggct cgccggtaag ttgcagttcg actttttctg ctaataacgc
    19141 attaaaggga gcagcaacaa agttagccaa ggtagtaaaa gcaaaataaa atcccactaa
    19201 tatcatcaaa aaaatcagtg gaatcagtac aaagctaagc cattccagcc agcttggcag
    19261 taacatatcc aacaagccac cgatattggc aaaaaatccc caaatcagcc ctaccatcag
    19321 cacggtatta ataagaattg ggaaaatcac aaaaggcaaa aattgacgtt gtaacaataa
    19381 ccgccagcca tatataaaat aatgaaagcc taatccgact tgattttgcg gctcagaaaa
    19441 aactgaagac ataatgattc cttattttct atcaaaatta attagaaata tggtaagcta
    19501 cgcacattat tttcgcaaat atgaaaatac attttttatt gattatttga taaagaggac
    19561 acaatggaac tgcatattat tttttttatt cttgccgggc tactgattgc tgtactaatt
    19621 ggatttagcc tttggtccgc tcgtcgtgaa aaatcaaata ttttttcaaa tacattctcg
    19681 accagaccta ttgctgtgcc accacagaat aataaaatga gcaatagcat cccaacctca
    19741 ttacagccac aaaatgagga ttatcaagca atgtctgtgc cggaagaaaa tccgcaacag
    19801 atacaacagg aagttgaaag ctcgctgcaa aatatcaaaa tcagtttgcc gggcggaaat
    19861 cctcagcaac agcctgagca aattcagccg atacaatcgg tagcagaacc aacggttagc
    19921 acttacggtc agaaaatttc taatcagcaa catatccaat acaatacgcc ggattttgca
    19981 aacccaatgg tgaacacagt ggtggaagaa acacctcaag cagtagctat cgaacctcaa
    20041 gaaacccaat cggcagagga agaaaatcca tttgtaaccc tctatcttta cgcaccacaa
    20101 aatgaagctt tccgcggtga ttttgtagta cattatttag aagaagttgg cttacgtttt
    20161 ggcgaacacc aaattttcca ccgccatcaa catattgatg attcattaag tccgattatt
    20221 ttcagtgcag caaatttaat gaacccagga acctttgatt taaataatat ctcaaacttt
    20281 gcgacagctg gtttagtgct atttatgcaa cttccaaccg aaggcaatga tgtggctaat
    20341 atgaagttgt taatcagtaa cgctgaacac ttagcagcat cgttaggggg attcttatat
    20401 gacgataatc aacagccttt tggcgaagaa tcccgccaac gttatatgca acgtgtgatg
    20461 cactaattgc gaaaaaatta ataaatccga ccgcttgtac aagcggtctt ttttgtagag
    20521 aattttacca atgtctttat ttaaccaaac ctctttattt gaagagaatg ccacgcccga
    20581 gttagtcgag aaaatcgaaa ctattcgcca aacattgcgt caatacgagt atgaatatca
    20641 cgttttagat aacccaagcg tacccgatgc cgaatacgac cgtttaatga acgagctgaa
    20701 aaatctggaa tggcagcacc cggaactgat tagtgccgac tcgccgactc aacgggttgg
    20761 tgccaaaccg ctggcaggct ttgctcaagt cacccacgaa atccctatgc tttcgttgga
    20821 taatgccttc tccgatgaag acttagatgg ctttttacgc cgtatggaaa gctatatcac
    20881 cgcctctcct tcgcaactgg aattttgttg cgaacctaaa ttagacggct tggcagtgag
    20941 tattttatac gaaaacggta tacttacccg agctgcaacc cgtggcgatg gcacaaccgg
    21001 cgaagaaatt accgctaata tccgcaccat tcgcaatatt ccgttaaagc tcaacacgac
    21061 taatccacct gctcgattag aggtgcgagg cgaagtcttt atgccacaat caggctttaa
    21121 tgagctgaat gagaaagcct tagctaaagg cgaaaaaacc tttgccaacc ctcgcaatgc
    21181 cgcagcaggt tcgcttcgcc agttagatcc gaaaatcacc cgccagcgtc cgttagtgct
    21241 gaatgcctac ggaattgggg tgtatgaaag cgatgacgaa ctgccagcca cccatttcga
    21301 acgtttgcaa tggctgaaat cgcttggtat tcctgtaaat aatgaaatcc gcttggttca
    21361 aggcaaagct gctctcttgg cttattatgc ggagattcag gctaaacgcc caacattagg
    21421 ctatgatatt gatggcacag tattgaaagt aaatgacatt gccctacaag agcaactcgg
    21481 gtttatctct cgctcctctc gttgggcgat tgcgtataaa tttccggctc aagaagaaat
    21541 gacaatcctc aaagaagtgg acttccaagt gggaagaaca ggggcaatca cccctgtggc
    21601 gaaattagag cctgtttttg tcgctggcgt aacggtaagt aacgcaacgc tacacaacgg
    21661 tgatgaaatc gagcgacttg gtattgtgat tggcgatacg gtaattattc gccgagcggg
    21721 cgatgtaatt ccgcaaatta caggcgtgat gttagaacgc cgcccggaaa atgcaaaaaa
    21781 aattgaattt ccgaccgctt gtcctatctg tcactccgct gttactcggg tagaaggcga
    21841 ggcagtagca cgctgtaccg gtggtttatt ctgcgaagct caacgtaaag aagccttgaa
    21901 acatttcgtt tcacgcaagg caatggatat tgacggcgta ggcgaaaaac taatcgagca
    21961 gttaatggct cgagagctga ttgaaacgcc tgccgatctg tttaagctcg atcacactac
    22021 cctaatgcga ttagagcgaa tgggggaaaa atcggctcaa aatgctctca acagcatcga
    22081 aaaagcaaaa aacactactc ttcctcgctt tttattctcg ttaggtattc gtgaagtggg
    22141 cgaggcaacc gctctcaact tagccaacca ttttggtagc ttagaggcga tccgccaagc
    22201 cacttttgag caattaaaag aagtgcaaga tgtgggcgag gttgttgcca accgtattgt
    22261 cagcttctgg caagaaccgc ataatgtgga agtggtggaa gatttgatcg ctcaaggtgt
    22321 acgttgggaa aacgttgtga aagccgaaat tgtagataac ccgttaaaag ataaaaacgt
    22381 ggtcttaacc ggcacgctaa cccagctcac ccgtgatgaa gccaaagccc tattacaaag
    22441 tttgggctgt aaagtctccg gctcggtttc cagcaaaacc gattacttaa tcgccggcga
    22501 aaaagccggt tccaagctgg caaaagctca agagttggga attcagattt taagcgagca
    22561 acaatttatt gagcttactc aacattaaca aacaaagggg cagatgattg aaatctgccc
    22621 cttattctat ctattgaatg cttaaaagca ttaaccaatc aatttaaact gctgagctaa
    22681 aaacagtaac gtaaagctag ttaagtaaat taagccgata actgccaacc aaaataacca
    22741 gccttttgca cgatgctcac cttttagcac taaagagaaa tttaaccacg caaaaacagg
    22801 ggtagaaaca aatgatgaaa tcattgcaaa ttgtaacatt ttcgccacat cactcataaa
    22861 ttggctaata attaaaatgc cgatgagtgc agttaccgtc atccaaatac ttaattctgt
    22921 ttgtgaatgt tgcttacgcc cgctaattaa acgcaacgct tctgcattcg ctcgtgaata
    22981 tccatcaata acagtgatcg ttgtgccgaa catacacata aatgcaataa atgcgattaa
    23041 aagcttagac cagtcaccaa tcgcaaaagc atacattttg attaattgag caatataggc
    23101 aacaccggct tgttctactt tctcacctga accgtactga actaacgcac ctaatgctaa
    23161 aaaaacaatc gccaaaattg ccgtgccgat ataacccaca ttaaaatcaa aaataccgtc
    23221 ctcataattc actttactta aacgtttttt cgcaataacc cacattgagt taatggcaga
    23281 aatttcaatt ggtgcaggca tccagcccat taatgcaacg atgaacacaa gtgctgctaa
    23341 attccacggc gaaggctcta cgaaatctgg agcaatttca acgccacctt ttaaagcagc
    23401 aatgatcacg gcagataccg tagagatggt taaagcaatc ataatccatt tagataatgt
    23461 atctaagaat ttatattgcc ctagaagtaa aataccccaa gtgaccacaa tcacaatagt
    23521 tcctgccatt ggaatgctta aatctaacgg aatacctaaa gcagaaaaaa taaattttag
    23581 aatcgctgct gaaacaatcg ccaccgcagc tgtgttaatc attgcagcaa aaacgttaag
    23641 gataaagaaa ataataagat aaaactttcc tttttctttg tagccttcca ataaagtttt
    23701 accgctagct aaggtatatt gcacaccaaa gcggaaaaac ggatatttaa ataaattggc
    23761 taacagaata ataatcgcca gctgccagcc ataaatcgca ccagattgtg tagaggcaat
    23821 aatatgcgaa ccacccactg ccgcagatgc catcaaaatc cccggcccca ttgcagcaaa
    23881 tttactttgc caagttgaat gttctatttg ttgtgtcata tagctttcct tatcacatta
    23941 ctatcaaaac aagatggttt cattctactt ataaaaacca aataaaaaca ctcctctaga
    24001 aa
//
LOCUS       DANMCL010000033        23738 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.033, whole genome shotgun sequence.
ACCESSION   DANMCL010000033 DANMCL010000000
VERSION     DANMCL010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23738
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.033"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(182..1585)
                     /locus_tag="PXF40_001190"
     CDS             complement(182..1585)
                     /locus_tag="PXF40_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HDL5802535.1"
                     /translation="MLTYTFNTQEGTALYEQLYRFLKNDIESNILIAGDKLPSKRAFA
                     KHLGISVMTVETAYQQLVAEGYVNTQPKKGFFVNALNLPEKKEAISVQLQKISSEQYE
                     KNKKWQADLTNRQTLAENFPFSVWTKLVREVLKTHQSELMERAESGGVWTLKFAIANH
                     LRAFRGMIVNPTQIIIGAGTEYLYGLLIQLLGLDKHYALTEPSYDKLRRIYHSYRLST
                     ATVSMPFSIDELNSKNVDVIHTSPSHHFPTGHVMPIAKRYELLAWVAQKAERYIVEDD
                     YDSEFRFVGQPIPALKSIDMLGRVIYMNTFSKTLSSTVRIAYMVLPPELLNRFQQELG
                     FYASTVSNFEQYILAEFIQQGYFEKHINRMRAYYQKKRDKLLKAFKQGNLAEKIAIKE
                     EHSGLHFIVQLNTTLTERQILQAAEEQGIKFVALSAYYQDKSQIQQNAFIIGYSNLKD
                     DQINYVAESLKKILDNE"
     gene            1796..2668
                     /gene="pdxS"
                     /locus_tag="PXF40_001191"
     CDS             1796..2668
                     /gene="pdxS"
                     /locus_tag="PXF40_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HDL5802536.1"
                     /translation="MTNRYDLNRQLAQMLKGGVIMDVTTPEQACIAEEAGACAVMALE
                     RIPADIRAAGGVSRMSDPKMIKSIQAAVSIPVMAKVRIGHVTEAQILQAIEIDYIDES
                     EVLSPADDTFHINKRKFEVPFVCGAKNLGEALRRINEGAAMIRSKGEPGTGNVVQAVH
                     HLRKMKQEIARLVSHTTDELYHVAKELQVPFDLVQYVHQYQKLPVVTFAAGGVATPAD
                     AALMMQLGAEGVFVGSGIFKSGDPAKRARAIVQAVTNYNDPKLLAELSEDLGEAMVGI
                     NEQEIELLMAARGV"
     gene            2668..3240
                     /gene="pdxT"
                     /locus_tag="PXF40_001192"
     CDS             2668..3240
                     /gene="pdxT"
                     /locus_tag="PXF40_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HDL5802537.1"
                     /translation="MKIAILALQGAFSEHTDKLQQLGVESMEIRQLADLNQDFDGLIL
                     PGGESTVQGKLLRELGLLEPLRQKILNGLPTLGTCAGLILLAENLVNDDKKHLATLPV
                     TVKRNAYGRQLGSFLVEEEVKYLGKIPLTFIRAPYIESTGKDVEILAKISGKIVGVKY
                     QNQIGISFHPEVNNDLSFHRYFVEMCRKNK"
     gene            3389..4339
                     /gene="tal"
                     /locus_tag="PXF40_001193"
     CDS             3389..4339
                     /gene="tal"
                     /locus_tag="PXF40_001193"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HDL5802538.1"
                     /translation="MSQLDTLSKMTVIVADTGDIEAIKLYKPKDATTNPSLILSASAL
                     PQYAPLIEEAINYAKAQSSDKDQQLVDAEDKLAVNIGLEILKLVPGRISTEVDARFSY
                     DTEKTIAKARKLIGLYNDAGISNDRILIKIASTWQGIKAAEQLEKEGINCNLTLLFSQ
                     AQARACAEAGVYLISPFVGRILDWYKAHEGKEYAPAEDPGVISVTNIYNYYKQHGYDT
                     IVMGASFRNVGEIIELAGCDRLTISPPLLKELQESDEKLVCKLDYKGEIKPRPEKMTE
                     AEFYWEHNQEPMAVEKLAEGIRKFAIDQEKLEAMLAEKLQ"
     gene            complement(4401..4674)
                     /locus_tag="PXF40_001194"
                     /pseudo
     CDS             complement(4401..4674)
                     /locus_tag="PXF40_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
     gene            complement(4705..5169)
                     /locus_tag="PXF40_001195"
     CDS             complement(4705..5169)
                     /locus_tag="PXF40_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5802539.1"
                     /translation="MKKLALAVALMSSFALVGCANTDVFSGSVYSGEQAKEARSIAYG
                     TIVSVRDVKIQARSEGVIGTVGGGVLGGVAGNAIGGGTGQAIATAVGAVAGAVIGNQV
                     EQKASQVSSLEMVIRKDDGKEIVVVQKKEDGFVPGKRVRIVGSNSDLNVSLL"
     gene            complement(5190..5789)
                     /locus_tag="PXF40_001196"
     CDS             complement(5190..5789)
                     /locus_tag="PXF40_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5802540.1"
                     /translation="MDKIIAENAKFFEKMTACFGDLSQFEQKIRQIAEIAGIDLAAYE
                     IDHLAVRMNQTETAEQWKILLLDGATLLKESEVNGRPIGLFALIQAVEFCGQFVKIVE
                     LPFPKNKVYLEEGWEHIELVFPMLDNESSEQWVSRALSHFRLADNSEIKLKISQPQVE
                     GERLPNPSIAISLRNVTFCNPYCLKLHPYDIKSVIMSEN"
     gene            5823..7550
                     /gene="argS"
                     /locus_tag="PXF40_001197"
     CDS             5823..7550
                     /gene="argS"
                     /locus_tag="PXF40_001197"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011200504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HDL5802541.1"
                     /translation="MNIQQILSDKIKQAMVASGADSNVEPLVRQSGKPEFGDYQANGA
                     MGAAKKLGMNPREFAQKILENADLNGIADKLEIAGPGFINIFLNPEWLAENTNSSLQA
                     VNFGIKTANPQTIVIDYSSPNVAKEMHVGHLRSTIIGDAVVRTLAFLGNNVIRANHVG
                     DWGTQFGMLIAYLEKMENEHASEMELSDLEAFYRAAKEHYDSDEAFAEKARNYVVKLQ
                     SGDKYCLTMWKKLVDITMHHNQENYNRLNVTLTEKDVMGESLYNPMLPEIVADLKAKG
                     LAVEDDGALVVFLDEFKNKDGDPMGVIVQKKDGGFLYTTTDIAAAKYRYETLKADRAL
                     VFSDSRQAQHMQQAWLITRKAGYVPDSFSLEHPFFGMMLGKDGKPFKTRSGGTVKLKD
                     LLDEAVERADKLIAERSTELTAEEKAAVVEAVAIGSVKYSDLSKNRTTDYVFDWDNML
                     TFEGNTAPYMQYAYTRIRSIFARANIDENALSGSIQLNEPKERALAVKLLQFEEALNG
                     VAKEGMPHILCQYLYELAGSFSSFYEACPILNAEETTKNSRLKLAALTAKTLKQGLDL
                     LGIKTVEKM"
     gene            7740..8906
                     /gene="cgtA"
                     /locus_tag="PXF40_001198"
     CDS             7740..8906
                     /gene="cgtA"
                     /locus_tag="PXF40_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HDL5802542.1"
                     /translation="MKFIDEALIRVEAGDGGNGCVSFRREKFIPKGGPDGGDGGDGGD
                     VYLIADENLNTLIDYRFEKRYAAGRGENGRSAGCTGHRGQDITLRVPVGTRAIDNDTQ
                     EIIGDLTRHGMKMLVAKGGYHGLGNTRFKSSVNRAPRQKTNGTPGEKRDLKLELLLLA
                     DVGMLGLPNAGKSTFIRSVSAAKPKVADYPFTTLVPSLGVARVGADRSFVVADIPGLI
                     EGAADGAGLGIRFLKHLERCRILIHLVDIMPIDESDPAHNISVIESELYQYSEKLAEK
                     PIWLVFNKIDTIGEEEAAERAKDIAEQIGWEGDYYLISAATGQNVQALTRDIMDFIEA
                     NPREVEEENKAPEEVKFKWEDYHNEAMQNAVEEDWDDDWSEEDDEGIEFIYERH"
     gene            8991..9608
                     /locus_tag="PXF40_001199"
     CDS             8991..9608
                     /locus_tag="PXF40_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HDL5802543.1"
                     /translation="MLSSTSCDLFNIPFFQFAQMKKYCPEEIPRIKAEYKTQWEIWKK
                     LHQEVSRQLGQPFAPPHIEKWCNGWQVRAHFFAYYKYEFNRNSAAILSVILNRRRLQV
                     SLDWHCYRADRSQINVHQYNQWWENLDREKFADFEIWHGSESEYDDFRTVSQMSEQAF
                     TLTNEEDFWCIGKNVEKDDLDNIDVVEFIYQTIRALLPLYEKCHQ"
     gene            complement(9655..11613)
                     /locus_tag="PXF40_001200"
     CDS             complement(9655..11613)
                     /locus_tag="PXF40_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HDL5802544.1"
                     /translation="MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTW
                     AMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLPLQYRLSAVWGAHEGSLLLWVWL
                     LSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE
                     LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVF
                     LTLGIVLGSWWAYYELGWGGWWFWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWT
                     VLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLVLVVGGSLLLYAFKG
                     SEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFD
                     QMFLILMVPFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITV
                     SVVLGTMMSVFIVLLSLYELHQRATHRHSFLSGIFKLSRSHWGMVLAHLGVAMTVFGI
                     AFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRNGKYEAT
                     LNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGG
                     LFMALGGLLCMLDKRYRLRIENKKEVIA"
     gene            complement(11610..12167)
                     /gene="ccmE"
                     /locus_tag="PXF40_001201"
     CDS             complement(11610..12167)
                     /gene="ccmE"
                     /locus_tag="PXF40_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HDL5802545.1"
                     /translation="MNPRRKSRLKVVVSILLGLSVAAGLTLYALSQNIDLFYTPSEIV
                     NGKNDDPKQKPEVGQRIRVGGMVVEDTVKRDDKSLKVVFDLNDIGPSITVEYEGILPD
                     LFREGQGIVAQGVLIEPTRLKATEVLAKHDENYMPPELGDKLKEQHKKSGVSEQDLKG
                     ESETDRKMKAEAEAEKANNVQGESK"
     gene            complement(12353..12550)
                     /gene="ccmD"
                     /locus_tag="PXF40_001202"
     CDS             complement(12353..12550)
                     /gene="ccmD"
                     /locus_tag="PXF40_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HDL5802546.1"
                     /translation="MTFQFESISDFFAMGGYGFYVWLSYGVSFIAMIGLIWLSRREQK
                     AILAQAKKEIVREEKLKQTSQ"
     gene            complement(12565..13302)
                     /locus_tag="PXF40_001203"
     CDS             complement(12565..13302)
                     /locus_tag="PXF40_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HDL5802547.1"
                     /translation="MWKWLHPYAKSETQYHLLGKIQPFLGWLSLIMLAAAFVWGLAFA
                     PKDYQQGDSYRIIFIHVPAAIWSMGVYGSMAVAGLVALVWQIRQANLAMISMAPIGLV
                     FAFISLATGAIWGKPMWGTWWVWDARLTSALVLFFLYIGVMALYSAFQDRQTGAKAAA
                     VLSVVGVINLPIIHFSVEWWNTLHQGATITKFDKPSMAVEMLIPLLLAIFGSLIFTAW
                     FSIWRYRIALLKDERNRPWVKQLAKSV"
     gene            complement(13502..14164)
                     /gene="ccmB"
                     /locus_tag="PXF40_001204"
     CDS             complement(13502..14164)
                     /gene="ccmB"
                     /locus_tag="PXF40_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005565617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HDL5802548.1"
                     /translation="MILLTIIQRELTIAFRKPSEILNPLWFFLMVITVFPILMGPNPE
                     LLGKIAGGIAWVAALLSALLSFERLFRDDYLDGSLEQLMLLPLALPQVALAKVIAHWL
                     LTGLPLILLSPIAAILLSLETHVWWALVLTLLLGTPILSCLGAIGVALTVGLRKGGTL
                     LSLLILPLFLPVLIFAAAVLEAATLNMGYSGQLAIIGAILAVTLTFSPFAIAGALRIS
                     LN"
     gene            complement(14161..14802)
                     /gene="ccmA"
                     /locus_tag="PXF40_001205"
     CDS             complement(14161..14802)
                     /gene="ccmA"
                     /locus_tag="PXF40_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HDL5802549.1"
                     /translation="MNQTAQYQLKLNQIACERGETRLFEGCSFTVQSGEWVQIEGHNG
                     IGKTSLLRILAGLFLPAEGEVLWNDIAIQKQRDHYYSELFYLGHYSGVKPELTPWENL
                     RFYQKIQQLPQDDDALWHALTKVSLIGREDLPCSHLSAGQQRRVALAKLWLTNAKLWI
                     LDEPFTAIDKKGVADLIAHIEQHCEQGRLVIFTSHQAAESDKVRIISLDQFKV"
     gene            complement(14946..15656)
                     /gene="hda"
                     /locus_tag="PXF40_001206"
     CDS             complement(14946..15656)
                     /gene="hda"
                     /locus_tag="PXF40_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HDL5802550.1"
                     /translation="MQLPLPIHQIDEDTFDNFYSQNSEVLLGSLKRNFTDVQQPFFYI
                     WGGKSCGKSHLLKAVSNHFLLNNQTSSYIPLTKANYFSPLVLDNAELLNVICLDDIQA
                     IAGDAEWELAIFNLFNQIREQQGLFNEGQKTLLLISADCPPHQLNIQLPDLRSRLTWG
                     EVYQLNDLTDEQKCQILQLNAHQKGVELSDEVAHFLLKKAGTDLEQLSKILDKLDKAS
                     LQAQRKLTIPFVKEILSL"
     gene            15926..17527
                     /locus_tag="PXF40_001207"
     CDS             15926..17527
                     /locus_tag="PXF40_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802551.1"
                     /translation="MKNMTKLSLITLALAASSSVFAAPKTFVYCLEASPSALSPVLST
                     DGASFDVNALPIYNKLTDFEDGTTNVIPSLAEKWDISEDGKTYTFHLRKGVKFHDNKE
                     FKPSRELNADDVVFSINRQFDPNHPFHKVSGGNYEYFIGMDMQNIIDKVEKVDDHTVK
                     ISLKVPNAPFLANLAMDFNAVYSAEYAEQSLKAGKPERIDTNPIGSGPFQFVDYQKDA
                     TVRYKAFENYWQGTAKIDRLVFAITPDASVRLAKLQKGECHAMPYPNPADIEDLKKDP
                     NIELMSQSGMNIGYLALNSSIKPLDNQKVRQALNHAVNKQAIVDAVYQGAGQVAKNPI
                     PPTMWSYNEAVQDYDYNPEKAKALLKEAGFENGFDTELWAMPVSRPYNPNARRMAELI
                     QEDWKKVGVNAKIVSYEWGEYLKRLRQGEAATSMIGWTGDNGDPDNFLNTLLSCSAVE
                     AGSNYAKFCHKPFEEVVLGAAQESDKAKRTELYKQAQVIFKEQAPWITIAHSTVYFPV
                     RKEVKGYVMSPFSLHNFYKVDLADK"
     gene            17799..18803
                     /locus_tag="PXF40_001208"
     CDS             17799..18803
                     /locus_tag="PXF40_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5802552.1"
                     /translation="MFSFILKRVLMVIPTFIAITLITFALVHFIPGDPIEIRMGERGL
                     SPEVHQQMMEQLGLNRPLFEQYISYIKGVLHGDLGNSFRNNEPVLKEFFTLFPATVEL
                     AFFALLWSLIFGIILGVIAAVKKESWISHTVTTLSLTGYSMPIFWWGLILILYFSTPL
                     GLPASGRLPSEYWIEAETGFMLIDTWNSDEPGAFLAAIKSLILPSIVLGTIPLAVVTR
                     MTRSSMLEVLGEDYIRTAKAKGLNTTRIVIVHALRNALIPVVTVVGLIVGQLLSGAVL
                     TENIFSWPGIGKWIIDAINSRDYPVLQGSVLIIATIIILVNLTVDLLYGIVNPRIRHS
                     "
     gene            18905..19798
                     /locus_tag="PXF40_001209"
     CDS             18905..19798
                     /locus_tag="PXF40_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HDL5802553.1"
                     /translation="MSGITAVNPPAPKTPLQEFWYYFCQNRGALIGLTFIAIVFVACV
                     FAPWVAPFDPIEQNRSALLLPPAWLEGGNSAHLLGTDDIGRDILSRIIYGSRLSVFIG
                     LVIVLLSCVFGVILGLLAGYYGGTLDIIIMRFVDIMLAIPSLLLTIGVVTILGPSLIN
                     AAIAIAIVSIPSYVRLTRASVLSEKNRDYVTASRVAGASVLRLMFVVILPNCLAPLIV
                     QMTMGISNAILELAALGFLGIGAQPPTPELGTMLAESRGFMQSANWLVTIPGLAILSL
                     VLAFNLMGDGLRDALDPKLKQ"
     gene            19809..20798
                     /gene="dppD"
                     /locus_tag="PXF40_001210"
     CDS             19809..20798
                     /gene="dppD"
                     /locus_tag="PXF40_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HDL5802554.1"
                     /translation="MALLTVDQLSVHFGETKTPFKAVDRISYEVNEGEVLGIVGESGS
                     GKSVSSLAIMGLIDFPGRVMAEKLYFNGNDLLALKPKEKQQIVGADVSMIFQDAMTSL
                     NPSYTVGYQIMEALKVHQGGSKASRRERAIELLTMVGIPDPESRLEVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIDLLLELQRKENMALILITHDLALVA
                     ESAHRIIVMYAGQVVEEGKAEQIFKAPLHPYTQALLKALPEFAEGKSRLQSLPGVVPG
                     KYDRPQGCLLNPRCPYATEKCRTIEPAMQIINGRQVKCHTPLNAQGEPIRIAV"
     gene            20926..21915
                     /locus_tag="PXF40_001211"
     CDS             20926..21915
                     /locus_tag="PXF40_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5802555.1"
                     /translation="MKENNSLPPFLKAVDLKKYYPVKKGMFAKPKTVKALDGVSFTLE
                     RGKTLAIVGESGCGKSTLGRMLTMIESPTEGELFYNGQNFLVNDKETAQLRRKKIQIV
                     FQNPYSSLNPRKKVGSILEEPLLINTNLSAKERKEKVLEMMAKVGLKPEFYDRYPHMF
                     SGGQRQRIAIARGLMLQPDIVVADEPVSALDVSVRAQVLNLMMDLQEEMGLSYVFISH
                     DLSVVEHIADEVMVMYLGRCVEQGDTKTIFSNPRHPYTQALLSATPRLNPEQRRERIK
                     LTGELPSPLNPPKGCAFNARCRFATDRCYVERPELKTYQDGTRIACFVVEENN"
     gene            complement(22149..22721)
                     /locus_tag="PXF40_001212"
     CDS             complement(22149..22721)
                     /locus_tag="PXF40_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HDL5802556.1"
                     /translation="MIHNKISLDISSEQLADIRQQMLKFAQLQLQDIALAEDMVQEAF
                     VNAIKNIDNFQRKAALKTWIFAILKNKIIDYLRKKDRIVLESDLADDDEENHFFDNYG
                     HWKEEYYPSSWQEEAVYSKEFWILFEVCLSNLPAKQARVFMMREYLEATSDEICRVVN
                     ITSDNLYTLIYRARLQLQQCLSRKLTERNR"
     gene            22891..>23738
                     /gene="msrA"
                     /locus_tag="PXF40_001213"
     CDS             22891..>23738
                     /gene="msrA"
                     /locus_tag="PXF40_001213"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005546455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HDL5802557.1"
                     /translation="MKYNQLLLCLVSAIFTTSSIANITTPNEMRSENLQDIYLAGGCF
                     WGIEAYMEKIYGVKEATSGYANGKTEQTAYRIIGQTDHAETVHVTYDANKISLEKLLQ
                     YYFKVIDPTSKNKQGNDIGRQYRTGIYYQNEQDKQIILKEIQAQQAKYKQKIQVQVEP
                     LKHYILAEEYHQDYLKKNPNGYCHIDLNQANSIIIDPKDYPKPSDATLKMKLTPLQYS
                     VTQRKNTERSFSNEYWDNTAPGIYVDITTGEPLFSSLDKYDSGCGWPSFTKPIINEVV
                     NYTEDN"
BASE COUNT         7271 a         5023 c         4837 g         6607 t
ORIGIN      
        1 acgcactgga aatcaatttt aaatcgttca caacagtgcg tcgttgtgtg ccatgcatta
       61 tacgcaaaac aaaatgcctt gcaaggagaa tttggtaatt ttttgcaaaa atcactaaaa
      121 taattaccac ttgcgtgttt ttaaggcaat ttgctaaaaa ttaaagcagt tttgatactt
      181 gctattcgtt gtctaaaatt tttttcaggc tctctgctac ataattaatc tgatcatctt
      241 ttaaattaga gtacccaatt ataaaagcat tttgctgaat ttgagattta tcttgataat
      301 aagcagacaa tgcgacaaat tttatacctt gttcttctgc tgcctgcaaa atttgccttt
      361 ctgttaatgt tgtgtttagc tgtacaatga aatgcaagcc tgaatgttct tcttttattg
      421 caatcttttc tgctaaattg ccttgcttga aagcttttag taatttatcc ctcttttttt
      481 gataatacgc tcgcattcga ttgatatgct tttcaaaata gccttgttga ataaattctg
      541 ccaaaatata ttgctcaaaa ttggaaacgg tagaagcata aaaccctaat tcctgctgaa
      601 aacgattcag taattctggt ggcaaaacca tataggcaat tcgtacagtt gaagagagcg
      661 ttttagaaaa agtattcata tagataactc gcccgagcat atcaatagat ttcaatgcag
      721 gaattggttg tcctacaaaa cgaaattcgc tgtcgtagtc gtcttctaca atatatcttt
      781 cagctttttg tgcaacccaa gctaacaact cataacgttt ggcaatcggc attacgtgtc
      841 ctgtcggaaa atggtgtgat ggcgaggtat gtatcacgtc cacattcttt gaatttaact
      901 catcgattga aaatggcatc gatactgtgg ctgttgataa gcgataactg tgataaattc
      961 tgcgcaattt atcgtaactg ggctcagtta gtgcataatg tttatctaag cctagaagct
     1021 gaatgagcaa accgtaaaga tactccgtac ccgctccaat aataatctgt gttggattaa
     1081 cgatcattcc tctaaaggct cgaagatgat tggctatcgc aaattttaat gtccatacgc
     1141 ccccactctc agcacgctcc attagctcac tttggtgtgt tttcagcact tcgcgtacta
     1201 attttgtcca aaccgaaaac ggaaaatttt ctgctaaagt ctgtcgatta gttaaatctg
     1261 cctgccattt tttatttttc tcatactgtt ctgaactgat tttttgtagc tgaactgata
     1321 tggcttcctt tttttctggt aaatttaaag cattcacaaa aaagcctttt ttaggctgag
     1381 tattcacata accttctgct actaactgtt ggtaagctgt ttccactgtc attactgaaa
     1441 tgcctaaatg ctttgcaaaa gcccgtttag acggcagttt atcccctgct ataagtatgt
     1501 tgctttcaat gtcgtttttt agaaaacggt aaagttgctc atagagagcg gtgccttctt
     1561 gtgtgttaaa agtgtaggta agcataatct gacatgataa gaaaaacata aaatggtcat
     1621 tttaaacagt tcagattaaa ttacaataca tgctgtttcc tcactcaaat tggctgagtg
     1681 tatttaaatt ggtagatgaa cactcgcatc cagcgaatat aaaaataaac ttaatgccga
     1741 gctaatcgaa actacgaaaa gttcaattat tcaacaatta gaaggaaaaa gtacaatgac
     1801 taatcgctat gatttaaaca gacaacttgc tcaaatgtta aaaggcggtg taattatgga
     1861 tgtaactacc cctgagcaag cctgcattgc ggaagaagct ggagcttgtg cagtaatggc
     1921 actagagaga attcctgcag atattcgtgc agctggtggc gtttctcgta tgagtgatcc
     1981 caagatgata aagagtatcc aagcagcggt atccattcct gtaatggcga aagtacgtat
     2041 tggacacgtt acagaagcac aaatcctgca agcgatcgaa attgactata ttgacgaaag
     2101 tgaggtgctt tctcctgcag atgatacctt ccacattaac aagcgtaaat ttgaagtgcc
     2161 atttgtatgt ggagcaaaaa atttaggcga agccctacgt cgtattaatg aaggcgctgc
     2221 tatgatccgt agtaagggcg agccaggaac aggcaatgtg gtgcaagcag tacatcatct
     2281 tcgcaaaatg aaacaagaaa ttgcccgctt ggtttcacat accacagatg aactttatca
     2341 cgtagctaaa gagctccaag taccatttga tttagtacaa tatgtacatc agtaccaaaa
     2401 attgcctgtt gtcacctttg ctgctggagg tgttgcaacc cctgccgatg ctgcattgat
     2461 gatgcagtta ggtgcagaag gagtcttcgt tggctcaggt attttcaagt caggcgatcc
     2521 tgctaaacga gcgcgggcca ttgtacaagc tgttaccaac tacaacgatc ctaaattact
     2581 tgcggagctt tctgaagatt taggtgaagc aatggtagga attaatgagc aagagattga
     2641 attgctaatg gcagcaagag gtgtctaatg aaaattgcta ttcttgctct gcaaggtgca
     2701 tttagcgagc atactgataa actccagcaa ctaggggttg aaagtatgga aattcgtcaa
     2761 cttgctgatt taaaccaaga ttttgatggt ctgattttac ctggtggcga atcgactgtt
     2821 caaggtaaat tattacgtga attaggcttg cttgagccgc ttcgtcaaaa aattttaaat
     2881 ggcttgccaa cgcttggaac ttgtgcgggt ttaattttgc ttgcggaaaa tttggtaaac
     2941 gacgataaaa aacatttggc tactttgcct gtaacagtga aacgtaatgc ttacggaagg
     3001 caattaggct cgtttttagt agaagaagaa gttaaatatc tcggtaaaat tcctctcaca
     3061 ttcattcgtg cgccttatat agaaagcact ggaaaagatg tagaaatttt agccaagata
     3121 agcggtaaga ttgttggagt aaaataccaa aatcagatag gtatatcctt ccatcccgaa
     3181 gtgaataatg atttaagttt tcaccgctat tttgtggaaa tgtgccgaaa aaataagtaa
     3241 aagaaaaggg gctattgcct cttatttttt atactttttt agaaaaagta gttttgaata
     3301 aaaaaatact aaaactctat ttcccttatg ttattattat agtaactttt actactattt
     3361 atttcacaat caaaaaagga atcagactat gagccaactt gacaccttaa gcaaaatgac
     3421 cgttatcgtt gctgacactg gtgatattga agcaatcaaa ctttataagc caaaagatgc
     3481 aacaacaaac ccgtctttaa ttttaagtgc atcggcatta ccgcaatatg ctccattaat
     3541 tgaagaagcg attaattacg caaaagcaca aagtagcgat aaagatcaac agttagttga
     3601 tgctgaagat aaattagcgg taaatattgg tttagaaatc ttaaaacttg tacctggacg
     3661 tatttctaca gaagttgatg ctcgtttttc ttatgatact gaaaaaacta tcgctaaagc
     3721 acgtaaatta attggattat ataacgatgc aggcatcagt aatgatcgca ttttaattaa
     3781 aattgcctct acttggcaag gtataaaggc agcagaacag ttagaaaaag aaggcattaa
     3841 ctgtaactta acgttattat tctctcaagc tcaagctcgt gcgtgtgcag aagcaggggt
     3901 ttacttaatc tctccattcg ttggtcgtat tttagactgg tacaaagctc acgaaggtaa
     3961 agaatatgct ccagctgaag atccaggtgt aatttcagta accaatatat acaattacta
     4021 caaacaacac ggttatgaca ctattgtaat gggtgcaagt ttccgtaatg taggagagat
     4081 cattgagtta gctggttgcg accgtttaac catctcacca ccgttattaa aagagctaca
     4141 agagagcgat gaaaaattag tttgcaagct agattacaaa ggtgaaatca agcctcgtcc
     4201 agaaaaaatg acagaagcag aattctactg ggagcataac caagagccaa tggcagtaga
     4261 aaaattagct gaaggcattc gtaaatttgc gattgaccaa gagaagttag aagcaatgct
     4321 tgctgaaaaa cttcaataga caacgcataa aaaaaccggc attaacgata attaatgccg
     4381 gttttaattt ctataaatga ttatttaaac tcataacgtc taatcgtttt tagatcgcta
     4441 tcttcatttt taatttcatc ggcaagatga acacgagcac caaccgctgc atgtgcatca
     4501 tactcacgag ttagagtcac agtttcacca ttatctcgtt gaactgtaag ttcaacaaca
     4561 tcgtttgata ctgctttgct agataaatgt tgcattacct ttatcagaat aaacatctgc
     4621 agtacaagct gctaacataa gtgaagctaa tacagctaaa gaaagttttt tcattaataa
     4681 tatatcctct aggaaaaact aaaattaaag cagagaaaca ttcaggtctg aattagaccc
     4741 tacgattctc acacgtttgc caggcacaaa accgtcttct ttcttttgaa cgaccacgat
     4801 ttctttacca tcatctttgc gaataaccat ttccaatgaa gaaacttgac tcgctttttg
     4861 ttctacttga ttaccaatta ccgcaccggc aactgccccc actgcggttg caatcgcttg
     4921 ccctgtacca ccgccaatcg cattaccggc aacgccacct aatacaccac cgccgacagt
     4981 accgatcaca ccttcactgc gtgcttgaat tttcacatca cgcactgaaa caatagtgcc
     5041 ataagcgata gaacgagctt cttttgcctg ctcaccggaa taaacgcttc cgctaaacac
     5101 gtctgtattt gcacagccaa ctaaagcaaa acttgacatt aatgcgacag ctaaagctaa
     5161 ttttttcatt ttgtttgttc tccgaaacgt taattttctg acataattac actttttata
     5221 tcataagggt ggagctttag acaataagga ttacaaaaag ttacatttct caagctgatc
     5281 gcaatgcttg gatttggcaa tctctcccct tctacctgag gttggctgat ttttaattta
     5341 atctcagaat tatcagcaag tctaaagtgc gacaatgccc ttgacaccca ttgttccgaa
     5401 ctttcgttgt ctaacatcgg aaaaaccagc tcaatatgtt cccagccttc ttctaaataa
     5461 accttatttt tcggaaaagg caactcgaca atctttacaa attgtccgca aaattcaacc
     5521 gcttgtatta atgcaaacag ccctatcggt ctgccgttta cctcgctctc tttaagtaag
     5581 gttgccccat caagcaaaag gatcttccac tgttctgcgg tttcggtttg gttcattctt
     5641 accgcaagat gatcgatttc atacgctgct aaatcaatgc cggcgatttc agcaatttgt
     5701 cggattttct gttcaaattg cgataaatcg ccaaaacaag cggtcatttt ctcgaaaaat
     5761 tttgcatttt ctgctataat tttgtccatt tttttgtaaa tagaatttaa ataggttaaa
     5821 cagtgaatat tcaacaaatt ttatcagata aaattaaaca ggcaatggta gcaagcggtg
     5881 cagacagcaa tgtcgagcct ttagtccgcc aatcgggcaa gccggaattt ggcgattacc
     5941 aagccaatgg tgcgatgggt gcagcgaaaa aattggggat gaatccgcgt gaatttgccc
     6001 aaaaaatctt agagaatgcc gatttgaacg gtattgccga taaattagaa attgccggtc
     6061 cgggctttat caacattttc ttaaacccag aatggctggc ggagaacact aacagttcat
     6121 tgcaagcggt caattttggc ataaaaactg caaatccgca gacgattgtg atcgactact
     6181 cctcgccaaa cgtagcaaaa gaaatgcacg tcgggcattt gcgttccacc attattggcg
     6241 atgcggtagt tcgtaccctt gcgtttttag gcaataatgt gattcgtgcc aaccacgttg
     6301 gcgactgggg tactcaattc ggtatgctga tcgcttacct tgaaaaaatg gaaaatgagc
     6361 acgccagcga aatggagcta agcgatttag aagccttcta tcgtgcggca aaagagcatt
     6421 atgattcaga cgaagcattc gccgaaaaag cccgtaacta tgtggtgaaa ttacaaagcg
     6481 gcgataaata ttgcttaaca atgtggaaaa aattggtcga tattacaatg caccacaatc
     6541 aagagaacta caatcgctta aatgttacgc tcaccgaaaa agatgtaatg ggcgaaagcc
     6601 tctacaatcc aatgttgcct gaaattgtgg cggatttaaa agccaaaggc ttagcggtgg
     6661 aagatgacgg tgctttagtg gttttcctcg atgaatttaa aaataaagat ggcgacccaa
     6721 tgggcgtaat cgtgcagaaa aaagatggcg gtttcttata taccactacc gatattgcgg
     6781 cagcaaaata tcgctacgag accttaaaag ctgaccgagc cttagtcttt tctgacagcc
     6841 gccaagctca acatatgcaa caggcatggc tcattacccg caaagcgggc tatgtgccgg
     6901 acagtttcag ccttgaacac ccgttcttcg gaatgatgct aggcaaagac ggcaaaccgt
     6961 tcaaaacccg tagcggtggc acagtcaaac tcaaagattt attagatgaa gcggtagagc
     7021 gtgccgataa actgattgcc gaacgttcaa ccgagctaac tgcggaagaa aaagccgccg
     7081 tggttgaagc ggttgcgatt ggttcggtga aatattctga cttatcgaaa aaccgcacca
     7141 ccgattatgt gttcgattgg gacaatatgc tgacctttga aggcaatacc gccccgtata
     7201 tgcagtatgc ctacacccgc attcgctcca tctttgcccg tgcgaacatt gacgaaaatg
     7261 cattgagcgg ttcaatccaa ctcaatgagc caaaagagcg tgcattagca gtgaaactat
     7321 tgcaatttga agaggcatta aacggcgtgg caaaagaagg tatgccacat attttatgcc
     7381 aatatttata cgagcttgca ggtagtttct ccagtttcta cgaggcttgc ccgattctca
     7441 atgccgaaga aacaaccaaa aacagccgtt tgaaactcgc tgccttaacg gcgaaaacct
     7501 tgaaacaagg gttggattta ctcggtatta aaactgtaga gaagatgtaa tacaaactct
     7561 ctccccttgt gggagagaga ccgcttatga gcgttcagcg aaataagcag agagagggga
     7621 caagcggtaa tttttattaa aatttttaca cattttcccc tctccctgat ttttcttctg
     7681 aacgaagaaa aatctgtccc tctcccacaa ggggagaggg catataaaag gaaacaaata
     7741 tgaaatttat tgacgaagcc ctgattcgtg tagaagcagg cgatggcggt aatggctgtg
     7801 tgagcttccg ccgtgaaaaa tttatcccga aaggcggacc tgacggtggt gatggtggcg
     7861 atggtggtga tgtgtattta attgccgatg aaaacctaaa cacccttatc gactaccgct
     7921 ttgaaaaacg ttatgccgct gggcgtggcg agaatggtcg cagtgccggc tgtaccggac
     7981 atcgtgggca agatattacc ctacgagtgc cggttggaac ccgtgcgatt gataacgaca
     8041 cccaagaaat tattggcgat ttaacccgcc acggaatgaa aatgctggtg gcaaaaggtg
     8101 gttatcacgg tttaggtaat acccgcttta aatcctcagt aaaccgagct ccacgccaaa
     8161 aaaccaacgg tacgcctggc gaaaaacgtg atttgaaatt agagctgtta ctgcttgccg
     8221 atgtgggaat gcttggctta ccaaacgccg gtaaatccac ctttatccgc agtgtctctg
     8281 ctgccaaacc aaaagtggcg gattacccgt tcacgacgct ggtgccaagt ttaggggtag
     8341 cccgtgtggg ggccgaccgc agttttgtgg ttgccgatat tccggggtta attgaaggtg
     8401 cagcagatgg tgcagggctg gggattcgtt tcctaaaaca cttggaacgt tgccgtattt
     8461 tgattcactt agtcgatatt atgccgattg atgaaagcga tccggctcat aatatttcgg
     8521 tgattgaatc cgagctttac caatacagcg aaaaactcgc cgaaaaaccg atctggttgg
     8581 tgtttaataa aattgacacc atcggcgaag aagaagctgc tgagcgagca aaagacattg
     8641 ccgagcaaat cggctgggaa ggcgattact acttgatttc tgccgctacc ggtcaaaacg
     8701 tgcaagctct cactcgtgat attatggact ttattgaagc caacccacgc gaagtggagg
     8761 aagaaaataa agcacctgaa gaagtcaaat tcaaatggga agactaccac aacgaagcaa
     8821 tgcaaaatgc ggtagaagaa gattgggacg acgattggag cgaagaagat gacgaaggca
     8881 tagagtttat ttacgaacgc cattagtgca ataatacaag cggttgtttt taaacggaga
     8941 tttgcaaatt tccggagaaa aacaaccgct tgtaggttta aggagagttt atgcttagct
     9001 caacatcgtg cgatttattc aatattccgt tcttccaatt tgctcagatg aagaaatatt
     9061 gccctgagga gatccctcga attaaggcgg aatataaaac tcaatgggaa atttggaaaa
     9121 agctacatca ggaagtttct cgtcagcttg ggcagccgtt tgctccacca catattgaga
     9181 agtggtgcaa cggttggcaa gttcgagccc atttttttgc ctattacaag tatgaattta
     9241 atcgaaattc tgcggctatt ctttccgtga ttttaaatcg tcgccgtttg caagtgagcc
     9301 ttgattggca ttgttatcga gccgatcgct cgcaaattaa cgtgcatcaa tacaatcaat
     9361 ggtgggaaaa tttagatcgg gaaaagtttg ctgattttga gatttggcac ggaagtgaga
     9421 gtgaatatga tgattttaga accgttagtc agatgtcaga gcaagcgttc accctaacta
     9481 acgaggaaga tttttggtgt atcggcaaaa atgtggaaaa ggacgatttg gataacattg
     9541 atgtagtaga atttatctac caaaccattc gggcattatt gccactttat gagaaatgtc
     9601 atcaataaac actaaaaaga gaggcgaaca tcatttgttc gcccctttca aaatttaagc
     9661 tatcacttct tttttatttt caatgcgtaa acggtagcgt ttatccaaca tacagagtaa
     9721 accaccgaga gccataaaca gcccgccaat ccaaatccag cgaatgaacg gtttataata
     9781 caaacgcact gcccaagagt tatcttctaa tttttcgcca agtgcagcgt ataaatctcg
     9841 ggtaaagccc cagtcaatcg ccgcttcggt cattcccatt cggctcaccg tatagaaacg
     9901 tttttcagca ttaagtgtgg cttcatattt accgtttcga gtaatttcaa gctcggcagt
     9961 gccgccttga tagtttgccc catcggtgat tttaatacct ttaaattcaa attggtaatc
    10021 taaaatctca gctttatcac ccacattcat tctgacatct cgttcaatgc tgaaattttg
    10081 gctaaatgca atgccgaaca ctgtcatcgc aacccctaag tgagccagca ccattcccca
    10141 atgtgaacgg gacagtttga aaatgccact taagaacgag tggcgatggg ttgcacgttg
    10201 gtgtagctca tacaggctaa gtaacacaat aaagacagac atcatcgtgc ctaacaccac
    10261 actcacggta atggtgttac ggaataagta tggcaatccg aatccaagca atgccattaa
    10321 aatagttgca ataattaccg gtttacgaat agcagaaact tggtctctac gccatttcac
    10381 taatggtcca atccctaata caaatgagaa aggaaccatt aaaattaaga acatttggtc
    10441 aaaaaatggt gccccgattg aaatcgtccc taagccgatt tgtttgtgaa ttaatggcag
    10501 taaggtccct aaaaacacca ccgataaaaa tgccattaat aaaatattat taatgagtag
    10561 catcgtttct cttgaatagc gttcatagtt atctaagctt ttaatttccg agcctttgaa
    10621 tgcatacagc agtaaagaac cacctactac taacaccaag taagccaaga tgtataaacc
    10681 acgagttgga tctgaagcaa aggcgtgaac tgacaccaaa atgcctgaac gcactaagaa
    10741 agtccccact aaacagagcg agaaagcaag aatcgctaat aagaccgtcc acgctttaaa
    10801 tgtgcctcgt ttttcagtca ctgctaatga atgaatcagt gctgttcctg cgagccacgg
    10861 cattaatgag gcattctcga caggatccca gaaccaccag ccaccccaac caagttcgta
    10921 gtatgcccac caagaaccaa gcacgatacc gagcgttaaa aatacccacg ctgccattgt
    10981 ccacggacga gaccatcttg cccacgcagt atctaaacgc cctgtcatca gtgaggcaat
    11041 cgcaaaagca aaggcaacgg agaaacccac atagcccata taaagcaacg gtgggtggaa
    11101 gatcaagccc acatcttgca gcattgggtt taattctttg ccatcaatcg gaaaatttgg
    11161 gaaagttcta tcaaacgggt tggaggtaaa aatcacaaac atcaaaaagc cgatgccaat
    11221 gacccccatt agtcctaaca ctcgagcaac ggcatcttcc ggcattttac gggtaaaggt
    11281 tgctaccccg acagaccaaa gcgacaacaa ccaaacccaa agcaataatg agccttcgtg
    11341 agcgccccac accgcagata aacgatattg caacggtaaa cggctattgg agttgttcac
    11401 cacatattgc acggtaaaat cattcaccgc aaacagataa aacagcgaac caaaagagac
    11461 agtcaatgcc aaaaacattg cccaagtcat cgggcgggca agagcaatta aggtgctatt
    11521 ttgcttttct gctccccaaa gcggtaaaac tgccaacaag atagaaatcg ctagggctaa
    11581 tgccaacgta taattgccta attctgcaat catttgcttt ccccttgcac attgttggct
    11641 ttttctgctt ccgcctcggc tttcattttg cggtcggttt ccgattcacc tttcagatct
    11701 tgttcagaca cacctgattt tttatgctgt tcttttaatt tatcgcctaa ttccggtggc
    11761 atatagtttt catcgtgttt tgccagaact tccgtagctt ttaaacgggt tggttcaatc
    11821 aacacgcctt gtgccacaat gccttgccct tcacggaata aatccggcaa aattccttcg
    11881 tattccacgg taatcgaagg cccgatatca ttgagatcaa atactacttt taaactttta
    11941 tcatcacgct ttaccgtatc ttccactacc attccgccca cacggatacg ctgaccaact
    12001 tcaggctttt gtttcggatc atcattttta ccgtttacaa tttcagacgg cgtgtaaaac
    12061 agatcgatat tttggcttaa cgcataaagt gtcaagcctg ctgcgacaga aagcccaagt
    12121 aatatcgaaa ccaccacttt taatcttgat ttgcgtcttg gattcatcgt aatcaccctt
    12181 caaaataaat gcaaaattgc ataaaaactc aaaaataaat tagtgtaaga atagcaaaaa
    12241 accgcaaaac attcccgata tttcaaggaa gttttgcgat ttctcaaatc aaatacctat
    12301 aaagaagtat gaggctatcg ttgcaaaaaa taaagttatt tcgaccgctt gtttattgtg
    12361 atgtttgctt taatttttct tcacgcacaa tctctttttt tgcttgagcc aaaatcgctt
    12421 tctgttcacg gcgactaagc caaatcagcc caatcattgc aatgaaactg acaccataag
    12481 agagccatac ataaaagccg tagccaccca ttgcaaaaaa atcgctgatt gattcaaatt
    12541 gaaatgtcat tgttctctcc tactctaaac tgattttgcc agttgtttta cccaagggcg
    12601 attacgttcg tcctttaata aggcaatgcg ataacgccaa atgctaaacc aagcggtaaa
    12661 aattaagcta ccgaaaatcg ccaatagcaa cggaattaac atttccaccg ccatagacgg
    12721 tttatcgaat ttagtgatgg tcgccccttg atgcaaggtg ttccaccatt ccaccgaaaa
    12781 gtgaataatc ggcaagttaa tcacgccaac aactgacagc acagccgccg ctttggctcc
    12841 ggtttgtctg tcttggaatg cggaataaag agccatcacg ccgatataaa ggaaaaataa
    12901 cactaaagcg gaggttaaac gagcgtccca cacccaccaa gtcccccaca ttggtttgcc
    12961 ccaaattgca ccggttgcaa gtgaaataaa agcgaatact aagccgatag gtgccattga
    13021 aatcatcgcc aagttagctt ggcgaatttg ccaaaccaat gccaccaagc ctgccaccgc
    13081 cattgagcca tatacgccca tcgaccaaat tgctgccggc acgtgaataa agataatgcg
    13141 atagctatcg ccctgttggt aatctttcgg ggcaaaagcc aagccccaaa caaaagcagc
    13201 cgctaacata atcaaactta gccaacctaa aaacggttgg attttcccta gcaaatggta
    13261 ctgcgtttcc gattttgcat aagggtgtag ccatttccac atatatttct ccaaagtaaa
    13321 taattcccct cacccgttta caggagaggg acgatttgag cttcgttcag aagcgaaaat
    13381 cagggagagg ggaaaaagtt gcaaattttc ataataattc gaccgcttcc cctctctctg
    13441 aaaaacacct ctgaacgagg tgtttttcgg tctctctccc tcaagaggga gagaggaagt
    13501 tttagttcaa actaattctt aatgcaccgg caatcgcaaa cggcgaaaaa gttaaagtaa
    13561 ccgctaaaat tgctccgata atcgccagtt gtccgctata acccatattt aaggtggcgg
    13621 cttctaatac cgcagcggca aaaatcagta ccggtaagaa taacgggagg attaataaac
    13681 tcagcaacgt accgcccttg cgtaagccca cagtgagtgc cacgccaatc gctcctaagc
    13741 agcttaaaat cggggtgccg agtaataatg tcagcactaa cgcccaccaa acgtgggttt
    13801 caagtgaaag caaaatggca gcaatcggtg aaagtaaaat caacggtaag ccggtcagca
    13861 gccagtgagc aatcactttc gctaacgcaa cctgcggcaa ggcaagcggc agtaacatta
    13921 attgctcgag cgaaccgtct aaataatcat cacggaataa ccgctcaaag gaaagcaatg
    13981 cagaaagcaa agcagctacc cacgcaatgc cgccggcaat tttgcctaat aattcggggt
    14041 taggtcccat taaaatcggg aatacggtaa tcaccattaa aaaaaaccac aacggattta
    14101 aaatctccga gggtttacga aaggcaatgg tgagttcccg ctgaataata gtcaataaaa
    14161 tcatacttta aattgatcta acgaaataat acgcactttg tcgctttcag cagcctggtg
    14221 gctggtaaaa atcactaatc tgccttgctc gcaatgctgt tcaatatgag caatcagatc
    14281 cgccacaccc tttttatcaa tagcggtaaa gggttcatct aaaatccaaa gtttggcgtt
    14341 agtgagccac aattttgcca acgccacacg gcgttgctga ccggctgaca aatgcgaaca
    14401 aggcaaatct tcacgcccga tgagcgacac tttcgtcaat gcgtgccaaa gggcatcatc
    14461 atcttgcggt aactgttgga ttttctggta gaaacgcaaa ttttcccacg gtgttaattc
    14521 cggttttacc cccgaataat gccctaaata aaatagttca gaataatagt gatcacgctg
    14581 tttttgaatt gcaatatcgt tccacagcac ctcaccttcc gcaggtaaaa aaagcccggc
    14641 taaaatacgt aacaggctgg tttttccaat gccgttatgc ccttcaatct gcacccattc
    14701 accactttgc acggtaaaac tgcacccttc aaacaaacgg gtttcgcccc gttcgcaggc
    14761 aatctgatta agtttaagct gatattgggc cgtttggttc attatttttc atctggttga
    14821 acattttagc cgaagtgtat cataagcctt tgatttaacg tagcaaataa attacttctt
    14881 tagaggtagc aagcggtcaa attttcaaaa agttttgcaa attttgataa gaatcaaacc
    14941 gcttgttaca gagagaggat ttccttcaca aaaggaatgg ttaatttacg ctgggcttgg
    15001 agagacgctt tatccaactt atccaatatt ttagagagtt gctctaaatc cgttcccgct
    15061 ttttttaaca gaaaatgagc gacctcatcg gacaattcca cccctttttg gtgagcattt
    15121 aactgtaaaa tttggcattt ttgttcatcg gttaaatcgt ttagctggta cacttcgccc
    15181 caagttaagc gggaacgtaa atccggcaat tggatattga gttggtgtgg tgggcaatcg
    15241 gcactgatta acagcaaggt tttttgccct tcgttaaaca agccttgttg ttctcgaatt
    15301 tggttaaaca ggttaaaaat agcaagttcc cattcagcat ctcctgcaat cgcttgaata
    15361 tcatctaggc aaatcacatt cagcagttcg gcattatcta acaccaacgg cgagaaataa
    15421 ttggctttag tgagcggaat ataactagaa gtttggttat ttaaaagaaa gtggttactt
    15481 actgctttca acaaatgact tttaccgcag ctcttaccgc cccaaatgta aaaaaacggc
    15541 tgttgaacat ccgtaaaatt tcgtttgagg gatccaagca acacttcgct gttttggcta
    15601 taaaaattgt cgaaagtgtc ttcatcaatt tgatgaatgg gtagaggtaa ctgcaaggct
    15661 ttccttaaat ctctaagttt gatatttttc taagaatagc ggaaaagcag gggtttgaga
    15721 agtaaaaata gtgagaaaat atccactcat ttttctaatg aagagatgac aagcggttga
    15781 atttccacat aattttgtca atctgaccga aaacccaccg ttttgtgtta aaaaaagatt
    15841 gcagttagct caaaaaattg tatattcaaa gctttctact taaaaagtag agtaaaacaa
    15901 ctattacaaa cacaacggag tgaatatgaa aaacatgact aaattatcgc taataacatt
    15961 agcgctagcc gcttcaagta gcgtctttgc tgcaccgaaa acctttgttt actgcttaga
    16021 ggcttcgcct tcagcattaa gcccagtgct atcaacagac ggtgcaagct ttgatgtgaa
    16081 cgccctcccg atttataaca aattaaccga ctttgaagac ggtacaacta atgttattcc
    16141 ctctcttgcc gaaaaatggg acatttcgga agacggcaaa acttacacct tccacctgcg
    16201 taaaggcgta aaattccacg acaataaaga atttaaacca agccgtgagt taaatgcaga
    16261 cgatgtagtg ttctccatta accgtcagtt tgatccaaac catccattcc acaaagtttc
    16321 cggcggtaac tacgaatact ttatcggtat ggatatgcaa aatattatcg ataaagtgga
    16381 aaaagtggac gatcacaccg ttaaaatcag cttaaaagtg ccaaatgcgc cgttcttagc
    16441 taacttagcg atggatttca acgccgttta ctcagcggaa tatgcagagc aatccttaaa
    16501 ggccggcaag cctgagcgta ttgataccaa cccaatcggc agcggcccgt tccagtttgt
    16561 ggattaccaa aaagatgcca ccgttcgtta caaagccttt gaaaactact ggcaaggcac
    16621 agcgaaaatt gaccgcttag tgtttgcaat tactccggat gcatcggtac gtttagccaa
    16681 gttacaaaaa ggcgagtgcc acgcaatgcc ttaccctaac ccggctgata tcgaagatct
    16741 gaaaaaagat ccaaatattg aattaatgag ccaatctgga atgaatatcg gctatttggc
    16801 attaaattca tcgattaaac cattagataa ccaaaaggta cgtcaagcat taaatcacgc
    16861 tgtaaacaaa caagcgattg tagatgcggt atatcaggga gccggtcaag tagcgaaaaa
    16921 cccaattcca ccaacaatgt ggagctataa tgaagcggtt caagactatg actacaaccc
    16981 tgaaaaagcc aaagcattgt taaaagaagc cggttttgaa aatggttttg atactgaact
    17041 ttgggcaatg ccggtatcac gtccatataa cccgaatgct cgccgtatgg ctgaacttat
    17101 ccaagaagac tggaaaaaag tgggcgtgaa tgcgaaaatc gtcagctatg aatggggcga
    17161 atatctcaaa cgcttacgcc aaggtgaagc ggcaacctca atgattggct ggacaggcga
    17221 taacggtgac ccagataact tcctcaacac cttattaagc tgctcagcgg tggaagccgg
    17281 ttcaaactac gccaaattct gccacaaacc gtttgaagaa gtcgtgcttg gtgctgccca
    17341 agaaagcgac aaagcaaaac gtaccgagct ttataaacaa gctcaagtga tcttcaaaga
    17401 gcaagctcct tggattacga ttgctcactc caccgtttac ttcccggtgc gtaaagaagt
    17461 aaaaggttat gtgatgagtc cgttcagctt acataacttc tacaaagtag atttagcgga
    17521 taaataatcc gccaacaagc ggtagaattt gcagattttt ttacaaattt gaccgcttgt
    17581 cctcccctct ttgaactacg aggggcaggg gggaaatttg gcagaagcga ttgccgaagt
    17641 gagaggattg taaaagagga aataaatttt ctgtcttatt gattattttc ttcgttaatt
    17701 actactgtca aatctcccct accccctctt tgctaaagag gggaatcaga tcgagagatc
    17761 agacaacttt gatgaaaatc caacctaaga gattttaaat gttttcattt attttaaaac
    17821 gtgtgctaat ggtgatccct acctttatag cgattacgtt aattactttt gcccttgtgc
    17881 attttatccc cggtgatcca attgagatcc gaatggggga acgtggatta tcgcctgagg
    17941 ttcatcaaca aatgatggaa caactcgggc tgaaccgacc gttgtttgaa caatacatca
    18001 gctacatcaa aggtgtattg cacggtgatc ttggtaactc atttcgtaac aacgaaccgg
    18061 tgctgaagga attttttacc ctattcccag ccacggttga gttggcattt tttgccctgc
    18121 tctggtcgtt gattttcggc attattctcg gtgtgattgc tgcggtgaaa aaagaaagtt
    18181 ggatttcaca cactgtaacc acgctttcac tgaccggcta ctcaatgcca attttctggt
    18241 ggggcttgat tttaattctt tatttctcca ccccgctcgg cttaccggct tcaggtcgtt
    18301 taccatctga atactggatt gaagccgaaa ccggttttat gctgattgat acttggaatt
    18361 cggacgaacc aggggcattt ttagcggcaa ttaaatctct gattttgccg tctatcgtac
    18421 tggggacaat ccctcttgca gttgtgaccc gaatgactcg ctcttcaatg ttggaagtgt
    18481 tgggtgaaga ctatatccgc accgccaaag ccaaaggctt aaacactacc cgaattgtga
    18541 ttgttcacgc attaagaaat gccttgattc cggtggtaac ggtcgttggc ttaattgtcg
    18601 ggcaactgct ttcaggagcc gttttaacgg aaaacatctt ctcgtggccg ggtatcggca
    18661 aatggattat tgatgcaatc aacagccgtg attaccctgt actacaaggc tcagtgctga
    18721 ttattgctac tattattatt ttagtgaacc ttacggtaga tctactctat ggcattgtca
    18781 atccgaggat tcgacatagt tagaaaaatt ccttcgattt ttcccctctt tagcaacgag
    18841 ggagttacac aagcggttca aattccgcaa ttttttacaa gattattttt agttggagtt
    18901 aatgatgtca ggaataacgg cggtaaatcc acccgcaccc aaaacaccgt tacaggagtt
    18961 ttggtactat ttttgtcaaa atcggggggc attaatagga cttaccttta ttgcaatcgt
    19021 ctttgttgcg tgcgtattcg caccttgggt tgcccctttt gatccaatcg aacaaaatcg
    19081 cagtgcgtta ttgctccctc ctgcttggct tgaagggggg aattccgctc atctgctggg
    19141 tactgacgat attgggcgtg atattctttc ccgtattatt tatggttcaa gattgtccgt
    19201 ctttatcggc ttagtcattg tgctactttc ttgcgtattc ggcgtgattt taggtctact
    19261 tgctggctac tatggtggca cactcgacat catcattatg cgttttgttg atattatgct
    19321 ggcgattcca agcctgcttt taactatcgg cgtggtcact attttaggcc cttcattgat
    19381 aaatgccgct attgcgattg cgattgtctc cattccaagt tatgttcgct tgacccgtgc
    19441 ttctgtatta agcgagaaaa accgtgatta tgttactgct tctcgtgttg ctggtgcgag
    19501 cgtgcttcgc ttaatgtttg tggtgatttt acctaactgt ttagctccgc ttatcgttca
    19561 gatgacgatg gggatctcaa acgctatttt agaacttgcc gccctcggct tcttaggcat
    19621 tggtgcacag ccgccaacac cggagcttgg cacaatgctt gccgaatctc gtggctttat
    19681 gcaatcggca aactggctgg tgaccattcc gggtctagcg attttatcgt tagtattagc
    19741 tttcaactta atgggtgacg gcttgcgtga cgccctcgat ccaaaactga aacaatagga
    19801 gatctaaaat ggcattatta acggttgatc aactttccgt ccattttggt gaaactaaaa
    19861 caccatttaa agcggtggat cgtatcagtt acgaagtcaa tgaaggcgaa gtattaggca
    19921 ttgtgggcga atccggttca ggaaaatcgg taagttctct cgctattatg ggcttaatcg
    19981 atttccccgg cagggttatg gctgaaaaat tgtattttaa cggcaatgat ttattggcat
    20041 taaaaccaaa agaaaaacaa cagattgtag gggctgatgt ctcaatgatc ttccaagatg
    20101 caatgaccag cttaaatccg agctatactg tgggctatca gattatggaa gccctaaaag
    20161 tgcatcaagg tggctcaaaa gccagccgtc gtgagcgagc gattgagttg ctgacgatgg
    20221 tcggtattcc cgatcctgaa tcccgtttag aagtttatcc gcaccagctt tcgggtggta
    20281 tgagccagag agtgatgatt gcgatggcga ttgcctgtcg cccgaaatta ttgattgccg
    20341 atgagccgac tactgcgtta gatgtgacga ttcaagctca aatcattgat ttattacttg
    20401 aattacaacg caaagaaaat atggcgttga ttttaatcac gcacgattta gcgttagttg
    20461 ccgagtctgc ccatcgcatt atcgtgatgt atgcagggca agtcgtggaa gagggcaaag
    20521 ccgagcagat attcaaagca ccactgcacc cttacaccca agcattgctc aaagccttac
    20581 cggaatttgc cgaagggaaa tcccgcctgc aatcactacc gggcgtagtg ccgggcaaat
    20641 atgaccgccc acaaggttgc ttactcaacc ctcgctgccc gtatgcaacc gaaaaatgcc
    20701 gaaccattga accggcaatg cagataatca acggcagaca ggtgaaatgc cacacgccac
    20761 tgaatgcaca gggtgagccg ataaggatag ctgtataacg tcataaagag tagggacgca
    20821 atgcttcgcg tccgttacaa gcggtgattt ttaaccgatt tttgcaaaat aacgatagtg
    20881 gacgcaaagc attgcgtccc tacattttcc gagaaggaaa acagaatgaa agaaaataat
    20941 tctctcccac cattcctcaa agcagtggac ttaaaaaaat actacccagt taaaaaggga
    21001 atgttcgcta aaccgaaaac ggtaaaagcg ctggatggtg tctcttttac ccttgaacgt
    21061 ggcaaaaccc ttgcgattgt tggcgaatcc ggctgtggaa aatcaacttt ggggcgaatg
    21121 ctcactatga ttgaaagccc aaccgaaggt gaactgttct acaacgggca gaatttctta
    21181 gtcaatgaca aagaaacggc tcaactacgc cgtaaaaaaa tccaaattgt gtttcagaac
    21241 ccgtatagct cgctcaatcc acgcaaaaaa gtaggtagca ttttagaaga accattattg
    21301 attaacacca acttatccgc aaaagaacgc aaagaaaaag tgttggaaat gatggcgaaa
    21361 gtcggcttaa aaccggaatt ttacgaccgt tatccgcata tgttttcggg cggacaacgc
    21421 cagcgaattg cgattgctcg gggcttaatg ttgcagcctg atattgtggt tgccgatgaa
    21481 cccgtttccg cattagatgt ttcggttcgg gcgcaagtgt tgaatttgat gatggatttg
    21541 caagaagaaa tgggcttgtc ttacgttttc atctcgcacg atttatccgt agtggaacat
    21601 attgccgatg aagtgatggt gatgtattta gggcgttgcg tagaacaagg ggataccaaa
    21661 actatcttca gcaatccacg tcacccttat acacaagcgt tactctccgc aacccctcgt
    21721 ttgaacccgg agcaacgccg tgagcggatt aaactgactg gcgaactacc aagcccgctt
    21781 aatccaccaa aaggctgtgc ctttaacgcc cgttgcagat ttgcaaccga tcgttgctat
    21841 gtggagcgac cagagctgaa aacctatcaa gacggtactc gcattgcttg ttttgtggtg
    21901 gaggaaaata attaggcaac gctcgctatt taaaaggtta aagtttttca actttaacct
    21961 ttatttttca tacttaatac tcctcatctt ttgtagcaaa atctttcatt aatttgctga
    22021 tatgctcaca atggtgttta aatgacaata cgggcaaata atcaaatgcg ttttaacgcc
    22081 aatcttctct tttaaagtga gttttcgttc ctttgagtca gaaattaacc ttgttacttg
    22141 tcggcaattc atctatttct ctccgttaat ttccttgaaa gacattgttg taactgcagc
    22201 cttgctcgat agattaatgt atataaatta tctgatgtaa tatttactac tcgacaaatt
    22261 tcatctgagg ttgcctctaa atattccctc atcataaata ccctagcttg ttttgcaggt
    22321 aaattgctta agcaaacttc aaataatatc caaaattctt tggaataaac agcttcttcc
    22381 tgccagctag aaggataata ttcttctttc caatgcccat aattatcaaa aaagtgattc
    22441 tcttcgtcat catcagctag atcactttct agtactatac gatctttttt acgtaaataa
    22501 tcaataattt tattttttag aatagcaaat atccaggttt tcaatgctgc tttacgctgg
    22561 aaattatcaa tattttttat tgcattaacg aatgcttctt gaaccatatc ttcagcaaga
    22621 gcaatatctt gtaattgtaa ctgagcaaat ttcaacattt gctgacgaat atcggcaagc
    22681 tgttccgatg aaatatctaa agaaatcttg ttatgaatca tagtgttata ttgagaaaat
    22741 tttttgtgag aatattaaac aatattcgac taatcctata gagagtaaaa ccaattttga
    22801 tcttagcaaa aaagtaagaa attatgaatg tttaaggtta aaccctcatc cttaaaaaat
    22861 aaaattacat aagttataaa ggagaactgg atgaaataca atcaactgtt actatgtttg
    22921 gtgtctgcta tctttaccac ctcctcaata gcaaacatca caacccctaa cgagatgcga
    22981 tctgaaaact tacaggatat ttacttggca ggaggatgtt tctggggcat tgaagcctat
    23041 atggaaaaaa tatatggcgt aaaagaggct acatcgggct atgccaatgg caaaactgag
    23101 caaactgctt accgaattat cgggcaaacc gatcatgcag aaacagttca cgtgacctat
    23161 gatgctaata aaatttcttt agaaaagctg ttgcaatatt actttaaagt aattgatcca
    23221 accagtaaaa ataaacaagg taatgatatt ggccgccaat atcggacagg tatttattat
    23281 cagaatgagc aagataaaca aattatttta aaagaaatac aagctcaaca agcaaaatac
    23341 aaacaaaaaa tacaagtgca agtagaacca ttaaaacatt atattttggc agaagagtat
    23401 catcaggatt acctaaagaa aaatccaaat ggctactgcc atattgattt aaaccaagcc
    23461 aacagcatta ttatcgatcc gaaagattat cctaaaccta gtgatgcaac attaaaaatg
    23521 aaattaacgc ctttgcaata tagcgttacc caacgtaaaa atactgagcg ttcattcagc
    23581 aatgaatatt gggataatac cgcaccgggc atttatgttg atataactac aggagagcct
    23641 cttttttcat ctctcgataa atatgactcc ggctgtggct ggccaagttt taccaaacca
    23701 attatcaatg aggttgttaa ctataccgaa gataatag
//
LOCUS       DANMCL010000034        23696 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.034, whole genome shotgun sequence.
ACCESSION   DANMCL010000034 DANMCL010000000
VERSION     DANMCL010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23696)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23696)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23696
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.034"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            170..646
                     /locus_tag="PXF40_001214"
     CDS             170..646
                     /locus_tag="PXF40_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802558.1"
                     /translation="MELGKTTETDVKEMYNLEPEGVNKYSKGNQYFIDPTQLDLEDLK
                     STLIIFDEKGVLVFVGSEFNSISSIEDSKNRYKKFDYLYKILASKYKLVKKERPFVGD
                     QYAKFKDGNSEIELSEPHMGGFKINLTYAKKEFLDAFQKIQSEDKKQKTKDEASSL"
     gene            complement(967..2100)
                     /locus_tag="PXF40_001215"
     CDS             complement(967..2100)
                     /locus_tag="PXF40_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis PLP-dependent protein"
                     /protein_id="HDL5802559.1"
                     /translation="MTKFNNIETTLVQIGNRTDPRTGAVAMPIILSTAYGRDGLGEST
                     GWDYTRTKNPTRAVLEQGIADLEGGDAGFAMASGMAAIQLVMSLFKAPDEWIISSDVY
                     GGSYRLFDFSHKNHGTLKPVYVNTADLAAIEAAITPNTKAIFVETPSNPLMEECDVAA
                     IAKIAKKHNLMLIVDNTFLTPALFRPIEHGADIVIHSATKYLSGHNDVLAGLIVAKDS
                     DATKVNGQNLTERLFYFQNCAGAVLSPFDSYLAVRGMKTLALRMERHQSNATELAKFL
                     AEQPEIDSVLYSGKSGMLSFRLQKEEWVAKFLKAIKLITFAESLGGAESFITYPATQT
                     HMDIPEAERITRGITNNLLRFSVGLEHVEDIKADLLQAFKQLK"
     gene            complement(2117..2929)
                     /gene="dapB"
                     /locus_tag="PXF40_001216"
     CDS             complement(2117..2929)
                     /gene="dapB"
                     /locus_tag="PXF40_001216"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HDL5802560.1"
                     /translation="MTLKIGIVGAGGRMGRQLIQAVHNAQGVELGSAFERKGSSLVGS
                     DAGEVAGVGTLGVVISDDVAQNVAGFDLLIDFTRPEGTLEHLDICVAHHKQMVIGTTG
                     FDDAGKAAIKAASEKIGIVFASNYSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHK
                     VDAPSGTALSMGEHIAKTLGRDLKTHGVFERNGITGERKRDEIGFATIRAGDVVGEHS
                     VWFADEGERVEIAHKASSRMTFANGAVRAAKWLNGKQNGLFDMTDVLDLNNL"
     gene            complement(2980..3357)
                     /locus_tag="PXF40_001217"
     CDS             complement(2980..3357)
                     /locus_tag="PXF40_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802561.1"
                     /translation="MGIKVLFGTKISAELQYLPEKDLVKILQFKQHVEIYGLENLAGR
                     NKSSDDVPTNDPYWAEKVAKAQKYSLWHYHIGIPEYDTSQGFGNYTSEYILHYVKGEN
                     FIQIVDFTSHPPFKLPSESYLQN"
     gene            complement(3347..3820)
                     /locus_tag="PXF40_001218"
     CDS             complement(3347..3820)
                     /locus_tag="PXF40_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802562.1"
                     /translation="MMKNLPLSMADTLAVIYPAFDFAADDKPATEQQISLLNFRITMA
                     NQLLIACIETIEKNPNFWAEIDLNDFKKYLNQNKVVIFDTQQYFTDGSRTMAILDNMK
                     SNIRKIEQQLSQATAFNFDLERMKERLNDTFHEVPKDITNVNEFRNWLKGVANGH"
     gene            complement(3888..4976)
                     /gene="rlmM"
                     /locus_tag="PXF40_001219"
     CDS             complement(3888..4976)
                     /gene="rlmM"
                     /locus_tag="PXF40_001219"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HDL5802563.1"
                     /translation="MFNKLALYCRAGFEKEVAGEITDKAAQQGIFGFANLKENSGYVI
                     FECYQAGEADRLAQALKFEQLIFVRQMLVVGDLLQNLSENDRISPILAQYAELNPRQS
                     SDVFVETPDTNEAKELLTFCRKFTVPLRSALKKQGWLGKSENMQGSVSLHILFTRPGA
                     CYVGYAYNHNKSPFFMGIPRLKFPAEAPSRSTLKLEEAILTFIPQAEEKKRFNDTMVG
                     VDLGACPGGWTYQLVKRGVFVYAVDHGKMAASLHETGRIEHCPEDGFKFQPPKRKQID
                     WLVCDMVEQPIRISKLIAKWLTNGWCRETIFNLKLPMKKRYQEVQLCLNFLEEELTKH
                     GFWFKMQAKHLYHDREEITVHIAVMGQK"
     gene            complement(4976..5368)
                     /locus_tag="PXF40_001220"
     CDS             complement(4976..5368)
                     /locus_tag="PXF40_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HDL5802564.1"
                     /translation="MKNKFVAIAAFSGLFTVAFGAIASHALSAQLSPKALGWIETGIK
                     YQMFHTLAILALGLFQIANFGQNPPVCRAKAFNIIGSNWALGILLFSGNLYLLALNVP
                     TIHWLTPIGGLCFMLGWIALIYISVRKA"
     gene            complement(5475..6876)
                     /locus_tag="PXF40_001221"
                     /pseudo
     CDS             complement(5475..6876)
                     /locus_tag="PXF40_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
     gene            complement(7031..9388)
                     /locus_tag="PXF40_001222"
     CDS             complement(7031..9388)
                     /locus_tag="PXF40_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HDL5802565.1"
                     /translation="MNTALEKGKFVFLDKPKNTITTAAHWGALNVTVENGKVVKSEGS
                     LAKNHQNELQDVVADQLYSPVRVKYPMVRKGYLEGNKDTTLRGRDKWVRISWDKAFEL
                     VSGEIQRVREQYGSESIFGGSYGWYSSGSLHASRTLLQRYLNVTGGFTNTKGDYSTGA
                     VQVIMPYVLGNIEVYAQQTSWHTIVESTELLVIWSSNPLNTLRIAWTSAEPEGIDYLA
                     KLKASGKRIICIDPVKSETCQFLEAEWLPINTGTDVALILGIAHTLITENKHDHDFLT
                     KYTVGFEQFADYVLGKADNLPKTAEWASQICDIPEEVIKTLANDFVTHRTMLMSGWGL
                     QRLQHGEQSHWALVTLAAMLGQIGLPGGGFGLNYRYSTNGLNVNSGVRLGAINAGKPN
                     PDMPFFPVSRIADALLKPNQPYDYNGQTLHYPNIKLVYWAGGNPFAHHPDTNYLVKAW
                     QQPETMIVNECYWTPTARMADIVLPATTSYERNDLTVAGDYVAKHIIPMKQVVEPQFE
                     AKNDYDIFAELAKRAGKEQAFTEGKSEMEWLKEFYQVAFEAGEKANTPLLDFEAFWAE
                     NKVLSFEAEHQNNTFVRYQDYRTDPIKHKLATPSGKIEIFSETIAKMNYEDCKGHPTW
                     FEHHEYSGKTNEAEPLALVTPHIKYRLHSQLAYSSLRQYYEVNGREPMLIHTKDAADR
                     GITSGDIVRIFNKRGQVLAGAVVTDGIIQGTVALYEGGWYDPQDLGKTDTPLCKNGNP
                     NVLTRNEGSSKLGQGNAPNTTTVQVEKYVGDAPEVTVFKAPFFSE"
     gene            complement(9524..12130)
                     /gene="acnB"
                     /locus_tag="PXF40_001223"
     CDS             complement(9524..12130)
                     /gene="acnB"
                     /locus_tag="PXF40_001223"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014391308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HDL5802566.1"
                     /translation="MENFIENYQQQVDERAALGVVPQPLSAEQTAQLVELLKNPPAEQ
                     AVFLLDLFTNRIPAGVDEAAYVKAAFLADITKGVATSPLISPAHAVKLLGTMQGGYNI
                     ETLLSALDNPELAPIAVEALSKTLLMFDNFHDVKERADQGNPFAQQVLESWANADWFT
                     SRPKLAEKLTVTVFKVTGETNTDDLSPAQDAWSRPDIPLHALAMLKNERDGIFPDENG
                     HTGPIKQLEALKEKGFPLAYVGDVVGTGSSRKSATNSVLWFMGEDIPYIPNKRAGGVV
                     LGGKIAPIFFNTLEDAGSLPIEVDVTNLNMGDVIDIYPYAGKICKHNSDEVLAEFELK
                     TEVLLDEVRAGGRIPLIIGRGLTHKARVALGLPESDVFIKPQSVSESNKGYTLAQKMV
                     GRACGVEGVRPGQYCEPRMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAA
                     YPKPVDVITHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIG
                     ISFPAGSGLVAFAAATGVMPLDMPESVLVRFSGTMQPGITLRDLVHAIPYYAIQQGLL
                     TVEKKGKKNIFSGRILEIEGLEDLKIEQAFELSDASAERSAAACTIKLNKEPIIEYLN
                     SNITLLKWMIAEGYDDKRTLERRIANMQAWLDNPELLEADENAEYAAVIEINLDEIKE
                     PIVCVPNDPDDARLLSQVQGDKIDEVFIGSCMTNIGHFRAAGKLLSQAQGELPTKLWI
                     APPTKMDAGLLTEEGYYSIYGKSGARVEMPGCSLCMGNQARVANNANVVSTSTRNFPN
                     RLGQGANVYLASAELAAVSALLGKLPTPQEYLDYMNNLQKDKDDIYRYMNFDQINSYV
                     KKADNVIVQVAV"
     gene            complement(12150..13397)
                     /gene="icd"
                     /locus_tag="PXF40_001224"
     CDS             complement(12150..13397)
                     /gene="icd"
                     /locus_tag="PXF40_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HDL5802567.1"
                     /translation="MQTQVQIPQGETIQLNQDGSLQVPDNPIIPFIEGDGIGVDVTPA
                     MKAVLDAAVEKAYQGKRKIAWMEIYAGEKANKLYGENTWLPDETLELIRQYHVAIKGP
                     LMTPVGGGIRSLNVAMRQGLDLYNCLRPIRYYDGTPSPVKHPELVDMVIFRENSEDIY
                     AGVEWVAGSPEANKVIEFLQQEMGVKKIRFTEDCGIGIKPVSKQGTQRLVRAALQYVI
                     DNNRKSLTLVHKGNIMKFTEGAFKEWGYQVAEEFGAKLIDKGPWMSLTNPKTGEEIII
                     KDSIADAFLQEILLHPTEYDVIATLNLNGDYISDALAAQVGGIGISPGANIGFEAAIF
                     EATHGTAPKIAGQNKGNPGSLILSGEMMLRHLGWVEAADLVVKAVSKTIANKTVTFDF
                     AEMLEGVTLRSTSEFAQDIIANM"
     gene            13631..14911
                     /locus_tag="PXF40_001225"
     CDS             13631..14911
                     /locus_tag="PXF40_001225"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005762304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HDL5802568.1"
                     /translation="MSKATLTLETGEKLELNMQKGTLGYQTIDIQPFLKHKLFAYDPG
                     LVSTAVCRSNITYVDGDEGVLLYRGYPIDQLAKHSDYLEVGYMLLFGERPTKEEYKDF
                     VQLIKKHTLVHEQLTKFFSGFRRDSHPMAVMCGVSGALAAFYHDAIDVNNQAHRELTA
                     IRLLAKIPTLAAMCYKYSIGQPFMFPQNHLSYAGNFLYMMFATPCEPYEVNPVLERAL
                     DRIFILHADHEQNASTSTVRTAASSGANPFACIAAGIASLWGPAHGGANEACINMLKE
                     IGTVDRIPEFIARAKDKNDPFRLMGFGHRVYKNYDPRAKVMRETCHEVLKELNIDNPL
                     FEVALELERIALSDPYFIEHKLYPNVDFYSGIVLKAIGIPTSMFTVMFALARTVGWIA
                     HWKEMYLQGNIKIVRPRQIYTGHTKRDFEPMDKS"
     gene            complement(14984..16213)
                     /locus_tag="PXF40_001226"
     CDS             complement(14984..16213)
                     /locus_tag="PXF40_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802569.1"
                     /translation="MFQAEPKNGKVTVEVLKQYLIDELKIDEEEIAIVIGNQHELDNI
                     DLFNPQCKINYIITVEALKEGWDCPFAYIFCSVQNVSSSKEAEQLLGRVLRMPYAKHR
                     QIEDLNRAYAPLSSKSFGETARNLQDKLIGMGFEALEVAEMLRIPQQENWIGNEGDLF
                     YTPTTVLALTQLPEMSDLSEAKRSQLKITEQEGHILVQVKGNLSEKLEKALIRTATGK
                     KKEQIEQQLQIHQNRVEILSSPAEKGEIFKVIPQLCMNIQGEFDLADSQVLLDYQSWN
                     LLDYPAKLDGFRLQENSQSFEIDVEDKRVSYHFNQQQLSFSDDWLRNPVKRGFSLPLA
                     HQNFYPDFIVELIDGRILIVEYKGEQLKSNEDSKEKALIGNLWEKLSQGKGLFIMAVK
                     SDENGQDVRTQLLNKLA"
     gene            complement(16180..17169)
                     /locus_tag="PXF40_001227"
     CDS             complement(16180..17169)
                     /locus_tag="PXF40_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5802570.1"
                     /translation="MKLKNYQNEALNRVSHYFSACLQSDAKTAFSQIQPEYSYKIPSE
                     HSNLRDVPYVCVRIPTGGGKTLLASHSIARIAKQYLDCDFPVTLWPVPSRTIKTQTTE
                     ALKNPQHPYRAVLDKTFNREVMVIESEDFDLLRPQDFGNKAIVIVSTIQNFRVENQDG
                     RKIYAFNEKLTAHFERLLPHIQANLEKISTTDLQENGLTSKQTGKIKCSFANLLRAYQ
                     PLVIVDEAHNARTSLSFDVLSQLSPSAILEFTATPNTDRKAGSNVLYHVSASHLKAEE
                     MIKLPIVLTEHHNWQQAIDGAVINRGALAQKAQYESEYVRPIYCFKLSRKTAK"
     gene            complement(17185..17703)
                     /locus_tag="PXF40_001228"
     CDS             complement(17185..17703)
                     /locus_tag="PXF40_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5802571.1"
                     /translation="MNRRYIGIEIGEHAKTHVVPRLKKVIEGEQGGISKAVNWQGGGS
                     FRFCELGEEVFDAFGSLNPNIRFDDLAAHIWYLENHFPLQKNSEKSPLVGTFNGKAYY
                     LLYNGILGDKRPQSGNVLTRKLMAELPYFAEFIQQGMDIVVYGEACRLGEVQLAEKKI
                     TFKQIPYDVMSR"
     gene            complement(17713..17784)
                     /locus_tag="PXF40_001229"
                     /pseudo
     CDS             complement(17713..17784)
                     /locus_tag="PXF40_001229"
                     /inference="COORDINATES: protein motif:HMM:NF013704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(17791..18669)
                     /locus_tag="PXF40_001230"
     CDS             complement(17791..18669)
                     /locus_tag="PXF40_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016851985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5802572.1"
                     /translation="MIQGDNLSALKSLLPFYAGQVKCIFIDPPYNTKSAFTHYDDNLE
                     HSIWLSMMYPRLEILRELLAEDGSIWITLDDNESHYLKIMLDEIFGRKNFISNLIWEK
                     KRKPSFLGKVGKVTDNLFCYAKNKNELNELNDLTYLETSGDETYPLYNAGNSREILVF
                     PPRSIKFKKHSDGLYKPTIFSKKTSSITLISELIIEDQWNKNTVEIEGEWRYSQKSID
                     EQLKNGDYYIIKSLDFRPRRVFERSAEKKKIHNLISRAHYDMATNEDSASEHLELFGE
                     DIAEDSFDYPKPEKLI"
     gene            complement(18669..18914)
                     /locus_tag="PXF40_001231"
     CDS             complement(18669..18914)
                     /locus_tag="PXF40_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methylase N-4/N-6"
                     /protein_id="HDL5802573.1"
                     /translation="MTTLTWYGKEEAVKKAKQTPYCLLRELPDFSHNIARQPTADSRQ
                     PTADSRQPTADSRQPTADSRQPTAQLLLKPYLKSSKI"
     gene            complement(19055..21541)
                     /gene="torA"
                     /locus_tag="PXF40_001232"
     CDS             complement(19055..21541)
                     /gene="torA"
                     /locus_tag="PXF40_001232"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5802574.1"
                     /translation="MKKQDNIDVSRRGFLKNSSLSLAAGAGLASGTTGVVGALASTSA
                     KAAEMKTVVTAAHWGPLGVVVENGKVVKSDSVFEISVPNELQHVVADQVHGETRVKYP
                     MVRKGYLEGNKDTTLRGRDEWVRVSWDKAFELVANEMKRVREAHGANAIFGGSYGWYS
                     SGALHASRTLLQRYLNVTGGFVGVKGDYSTGAAQVIMPHVLGTIEVYEQQTSWEVILE
                     SSDIVVLWSANPLNTLRIAWTSTDQQGIEYFKKLKESGKRIICIDPVKSESCEFLGAE
                     WVPVNTGTDVALMLGMAHTLVAEGKHDQAFLKKYTTGFEKFEEYLLGKTDNQPKDAKW
                     ASQICGVPEETIKKLATDFQSKRTMLMAGWGIQRQRHGEQGHWMLVTLAAMLGQIGLP
                     GGGFGLSYHYSNGGVPSATGGILGSITANPAVEAGAKTWLDETSKSSFPVARISDALL
                     NPGKTIDYNGTQITYPDIKIVYWAGGNPFTHHQDTNTLVKAWQKPDTIIVNECHWTPT
                     ARMSDIVLPATTSYERNDLTMSGDYSMMNIFPMKQVVEPQFEAKNDYDIFAELAKRAG
                     KEAEFTEGKSEMDWLQSFYQTAFEAARKNRVIMPKFEKFWQENKPLSFKASDKAKKWV
                     RYEEFRNDPLLNPLGTPSGKIEIFSEVIAKMNYDDCKGHPTWMEHEEYSGKTTAEEPL
                     ALVTPHSKWRLHSQLAYSSLRKQYAVNDREPVLIHTEDAAARGITSGDIVRIFNKRGQ
                     VLAGAVVTDGIIKGTLALHEGAWYDPLDLGTSEQPLCKNGNPNVLTRDEGTSKLAQGN
                     SPNTATVQVEKFTGQAPEVTVFKEPKYTQG"
     regulatory      complement(21560..21756)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            complement(21760..22875)
                     /locus_tag="PXF40_001233"
     CDS             complement(21760..22875)
                     /locus_tag="PXF40_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5802575.1"
                     /translation="MAKMKKIAVFVGIMALGAAVLGGTQYAMKATSSTEFCVSCHSMT
                     HPQAEWEGSVHFSNRKGIRAECSDCHLPQDGLHYVKAKIIALKDVWHTVVTNKLPDQE
                     AYEAHRLEMAQRVWAEMKENDSMTCKSCHSFDAMVLSEQTEAAQKMHKLAQETNQTCI
                     DCHKGIAHFMPDVPVDNAAAMGELAKHGAEFSTNDKTLYTLAMTPVQLAQGGEIRLLP
                     YAELHQWTAEGEQVKATVNGWQQEGAESVVYMDLGKRIMVALLPDDAQSKVNVTKTVF
                     DNVTNSNWKEINFEITAPKNAVTANITALNHFGDNLNQTHCSGCHAPIGAEHYTANQW
                     IGVVNSMKDRTSMSADDVRAVTIYLQRNAKDVAGSSH"
     gene            complement(23017..>23696)
                     /locus_tag="PXF40_001234"
     CDS             complement(23017..>23696)
                     /locus_tag="PXF40_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802576.1"
                     /translation="KVDIGIESLTLSLREQGWNVDYLELTQEQDNYATLMAQVHNLAP
                     SIIVFASYFAEDIVQFYQTFIRNPTNAIIYSIYAPSAFLPHEKLCEGVLWSTNSGLSE
                     NYLGRQFSQHYERFFGKSPTYSQASIAYDQANILANAWKQSVSPRHFKAVSNAIRLQP
                     HYGVNGTYYFNTDSQIGLTYAETHDLSISLPQLVYQIQQGQSRVIAPELFANAQFILP
                     PWFSEKA"
BASE COUNT         6793 a         5236 c         4505 g         7162 t
ORIGIN      
        1 agaatatcta gaaactttaa aataacaaaa atagcatccc cgcaagaatg aggagatggc
       61 tatttttgtt atttatagct tataggaaac tcattatgaa aaagatgtta aagctacatt
      121 atttgcaact attagtactt ctgtattagc tgaaccaacc gtttttaaaa tggaactagg
      181 taaaacaaca gaaacagatg taaaagaaat gtataacctt gaaccggagg gtgttaataa
      241 atacagcaag ggtaatcagt attttattga tccaacgcaa ttagatttag aagatcttaa
      301 atcaacgctt attatctttg atgaaaaagg ggtattagtt tttgttggtt ccgagtttaa
      361 ttctatatct tctatcgagg attcaaaaaa ccggtataaa aaattcgatt atttgtacaa
      421 aatactagca agcaaatata aacttgtaaa aaaagaacgt ccatttgtag gcgatcaata
      481 tgctaaattt aaagacggta attcagaaat cgaattatca gaaccacata tgggtggttt
      541 taaaattaac ttgacttatg caaaaaaaga attcttagac gcattccaaa agatacagtc
      601 tgaagataaa aaacaaaaaa ctaaagatga agcatcatcg ttataattaa aattttttag
      661 tcatacatta cattagaact ttattgttcg tatgagtgta atgtgtggct aaaaaatttg
      721 aacaaacgaa gcgacagcgt tagcaaaaac ttaaaatgat gtacggattt aaaaatctgt
      781 tcgtttgctt gttttataag caaactaatt tcgcataatt attattatgt taaatagata
      841 gttaaaataa cacatttaat taaatctttt cgtgtttctc tcctccttta ttaaaaaaga
      901 aaacggtcag attggtaaaa tctataccta atatgaccgc ttgtgaatac aaaaaaatta
      961 cttcaattac ttcaactgtt taaaggcttg cagtaaatca gctttaatat cttcaacgtg
     1021 ttctaaacca acggaaaaac gcagtaaatt attcgtaatg cctcgtgtaa tacgttctgc
     1081 ttccggaata tccatatggg tttgtgttgc aggataagta ataaaacttt ctgcaccgcc
     1141 taaactttcc gcaaaggtaa tcaatttaat tgccttgaga aatttcgcta cccactcttc
     1201 tttttgtaaa cggaaagata acataccact tttgcctgaa tataacacgc tgtcaatttc
     1261 aggttgctct gctaagaatt tagccagttc ggtggcatta gactgatggc gttccattcg
     1321 taatgccaag gttttcatac cacgcacggc aaggtaagaa tcaaatggcg acagcactgc
     1381 accggcacag ttttggaaat agaataaacg ctcggtcaaa ttctgcccgt ttactttggt
     1441 agcatcagaa tctttcgcaa caattaagcc ggctaacaca tcattatgcc ccgaaagata
     1501 cttggtcgca ctgtgaatca caatatcagc tccgtgctca atcggacgga ataacgctgg
     1561 ggttaagaac gtattatcaa cgatcaacat taaattgtgt tttttcgcaa ttttagcaat
     1621 ggcagcaacg tcgcactcct ccatcaatgg atttgacggc gtttccacga aaatcgcctt
     1681 agtattcggt gtaatagctg cttcaatcgc tgctaaatcc gctgtattaa cataaaccgg
     1741 ctttaatgtg ccgtgatttt tgtggctaaa atcaaacaag cggtaagaac caccataaac
     1801 atcgctggaa ataatccatt catcaggtgc tttaaataat gacattacta gctgaatcgc
     1861 tgccattcca gatgccatcg caaaaccggc atcaccgcct tctaaatccg caatcccctg
     1921 ctctaataca gctcgagttg ggtttttggt acgggtgtaa tcccagccgg tagattcgcc
     1981 taagccatca cgcccgtaag cagttgataa gataatcggc attgccaccg cccctgtacg
     2041 aggatcagtt ctgttaccga tttgcactaa tgtggtttca atattattga attttgtcat
     2101 tgttattatc cttcaattac agattattta gatccaatac gtctgtcata tcaaacaagc
     2161 cattttgttt gccatttaac cattttgcag cacgcactgc gccattggca aacgtcattc
     2221 gactagaggc tttatgtgcg atttcgacac gttcgccttc atcagcgaac catacactat
     2281 gctcccctac aacatcaccg gcacgaatag tagcaaagcc gatttcatca cgtttgcgtt
     2341 cgcctgtaat accgttacgt tcaaatacgc catgagtttt caagtcacgc ccaagagttt
     2401 tggcaatatg ttctcccatt gataaagccg tacctgatgg tgcatcaact ttatggcgat
     2461 ggtgtgcctc aatcacttca atatcacaat aatcgcccat tacttttgct gctttttcga
     2521 gcagtttaaa caccagattc accccaacgc tgtagtttga ggcaaaaacg ataccgattt
     2581 tttcactcgc tgctttgatt gcagctttac ctgcatcatc aaaaccggtt gtgccaatca
     2641 ccatttgttt atgatgagcc acacaaatat ccaaatgttc tagcgtgcct tcagggcgag
     2701 taaaatcaat tagtaaatca aaacctgcta cattttgggc gacatcatca gaaatcacca
     2761 cacctaatgt accaaccccg gctacttcac cagcatcact acctactaat gatgaacctt
     2821 tacgctcaaa agcagaccct aattctacgc cttgtgcatt atggacggct tgaattaatt
     2881 gacgccccat tcgcccaccg gcaccgacga ttccaatttt taatgtcata tttgttcttc
     2941 ctttttatat ttgtttttta caagcggtta catttttaat taattttgca aatagctttc
     3001 tgatggcaat ttaaaaggtg ggtgagaagt aaaatcaaca atttgaataa agttttcacc
     3061 tttcacataa tgtaaaatat actcagaagt ataattacca aatccttgac tggtatcata
     3121 ttctggaatg ccgatatgat aatgccataa agaatatttt tgtgctttag ccaccttctc
     3181 tgcccaataa ggatcattcg ttggcacatc atcagaactt ttatttcgac cagctagatt
     3241 ttccaatcca taaatttcaa cgtgttgttt aaactgcagg attttgacta gatctttttc
     3301 aggcaaatat tgcaattcgg ctgaaatttt tgtaccaaat aaaactttaa tgcccatttg
     3361 caacaccttt caaccagttt ctaaattcat taacattcgt tatatcttta ggcacttcgt
     3421 gaaaagtatc atttaaccgc tctttcattc gctctaagtc aaaattaaat gcggttgctt
     3481 gagagagttg ctgttcaatt ttgcgaatat tggacttcat attatccaat atagccattg
     3541 tccttgagcc atcagtaaaa tactgttggg tatcgaaaat caccacctta ttttgattta
     3601 ggtatttttt gaaatcgttt aaatcaattt cagcccaaaa gtttggattt ttttcgatag
     3661 tttcaataca ggcaattaat aattgatttg ccattgtaat acgaaaattt aacaatgaga
     3721 tttgctgctc tgttgcaggt ttatcatcag ctgcgaaatc aaatgccgga taaatcactg
     3781 caagcgtgtc agccatagat aagggtaaat ttttcatcat ctctccttac ggaagaagtt
     3841 gtcattatct actggattac ttaaaaaaac aacttattca ttttatgcta tttttgcccc
     3901 atcaccgcaa tatgtaccgt aatttcctca cggtcgtggt agaggtgttt agcttgcatt
     3961 ttgaaccaaa acccgtgttt cgttagctct tcttccaaga aattgaggca tagttgcact
     4021 tcttgataac gttttttcat cggcagtttt aggttgaaaa tcgtttctcg acaccaaccg
     4081 ttagtcagcc attttgcaat gagtttcgag atacgaatcg gctgctctac catatcacaa
     4141 accagccaat cgatttgttt acgcttaggc ggttggaatt taaacccatc ttcagggcaa
     4201 tgctcaattc ttccggtttc gtgtaaactt gctgccattt tgccgtgatc gactgcatag
     4261 acaaaaacac cacgtttgac taattgataa gtccaaccac ccggacaagc cccaagatcg
     4321 acccctacca tcgtatcatt aaagcgtttt ttctcctctg cttgcggaat aaaagttaaa
     4381 atcgcctctt ctaatttaag cgttgagcga ctaggtgcct cagccgggaa ttttaaacgg
     4441 ggaatcccca taaaaaacgg cgatttatta tggttgtacg catagcccac atagcaagct
     4501 cccggacgag taaataaaat atgcaagctc acactaccct gcatattttc cgatttcccc
     4561 aaccaacctt gttttttcaa tgccgaccgt aatggcacag taaatttacg acagaaagtt
     4621 aataattctt tcgcttcgtt ggtatccggt gtttcgacaa atacatcaga actttggcga
     4681 ggattaagtt cggcatattg ggctaaaatc ggcgaaattc gatcattttc agacagattt
     4741 tgcaacaaat ccccaacaac caacatttgg cgaacaaaaa taagctgttc aaactttaac
     4801 gcttgggcta atcgatctgc ttcccctgct tgatagcact caaaaatcac atagccacta
     4861 ttttctttaa ggttggcaaa gccaaaaatg ccctgttgtg cagctttatc cgtgatttcg
     4921 cctgctacct ctttttcaaa ccctgctcgg caatataagg ctaatttatt gaacattagg
     4981 cttttctcac actgatataa attaacgcaa tccaaccaag cataaagcag agaccaccaa
     5041 taggcgtaag ccaatgaata gtcggcacat ttaacgccag taagtacagg ttgccactaa
     5101 aaagcagaat gcctaacgcc caattgcttc cgatgatgtt aaaggctttg gctctacaaa
     5161 cgggtggatt ttgcccaaaa tttgcaattt ggaataaacc taaagctaaa atggcaaggg
     5221 tgtgaaacat ttgatattta atccccgtct caatccagcc taaggcttta ggcgataatt
     5281 gagccgataa tgcgtggctg gctatcgccc caaatgccac agtaaataag ccgctgaatg
     5341 cggcaattgc tacaaatttg tttttcataa gttgaagata ggtatgatgt tagatggctt
     5401 actatatcat attatcgaaa ccaacaagcg gtgaaatttt gcaaaaaaat tacaaaaaat
     5461 caccgtttgt atgcttaatg gttcaagata atatccacat cttccgattt atcgtgaacc
     5521 ccaaatctat ctactaaggt tttgctggcc tcatttaatc cgataatttc tacctcaaca
     5581 tcactttttc gatatttcaa cacaacttta tctaacgctg aaactgccgt tacgtcccaa
     5641 aagtgagcgt gggttaaatc aatgtggact tttttcagtt ctgaacgggt aaaatcaaat
     5701 tgtgcgataa aatcatcaga tgaggcaaaa aatacttgcc cgataacatc ataacgcaat
     5761 tcctctttct ctatagcact tgttttaacc gccatataac gtccaatttt attcgcaaag
     5821 aataatgccg agagcaacac gccggaaaat acaccaaggg ctaagttatg tgtataaacc
     5881 acaattgcaa cagtgactaa catcactaca ttaaagccga ttgggtgcgt ttttagctct
     5941 tttaaggaat gccaattaaa ggtgccgata gagaccataa tcatcactgc aactaatgca
     6001 gccatcggaa tcactctcaa aatatcgctc aaaaagacca caaaaatcag taataatatt
     6061 ggcaatgccc tgccctttac attcacggtt tttatcgctg tctgtctctg tcatttcatc
     6121 aacaatcgtt gccgtcatta aagattccaa taaccctact gcggccaagc tgaaagaata
     6181 aggcaaaata atccataagg tgtctaaatt aagcggaata tcgggtaata aaaacaccgg
     6241 taaggtatcg ggtaattgcc ccatatcccc aacggtacga acatcaatgc cttgccataa
     6301 tgtgaaaagt gttaaagcaa taatggtcac taatggtgag ggaatgattt ttccaatcac
     6361 cggtacataa ggaaaaagat aaatgatagc aagccctgct accaccagtg cataagtatg
     6421 ccaagttgta ttttgtaact caggtagttg tgccataaaa attaaaatgg caagtgcatt
     6481 aacaaaccca atcactacgg ctcgtgccac aaaccgcata agcgagccga gttttaacca
     6541 accggcaata atttgcaaca cgcctgttaa taaggtggcc gctagcatat attgtaaacc
     6601 gtgatccctc actaagcctg ctaataccag agccattgca ccggttgctg cagaaatcat
     6661 cgccggtctg ccgcccacaa aactgataat tactgcaata caaaatgagg catataaacc
     6721 aatttgtgga tcaacccctg caataattga aaatgctatg gcttctggaa ttaacgccaa
     6781 agccaccact aaaccagaga gaacatcacc tcgtacattt gaaaaccatt gttgtttaat
     6841 taccgtaggc gaaaattgct gaaataaagt tgtcattatt acccttaaat aaaaagaaaa
     6901 gccgagcaaa gtcggctaaa aatgaggcga gagagtagca aattagtgaa aagtcgtcaa
     6961 ataaacaagc ggtcttcttt cgctcttttt ttgcaaaaaa tagtagaaaa atgaccgctt
     7021 ggattaattg ctattcacta aaaaaagggg ctttaaacac cgtcacttca ggtgcatctc
     7081 ccacatattt ttccacttga accgtggtag tgttcggtgc attgccctgc ccgagttttg
     7141 atgaaccctc attacgggtt agcacattcg ggttgccgtt tttgcatagt ggagtatctg
     7201 ttttgcctaa atcttgcggg tcataccaac caccttcgta taacgctact gtgccttgaa
     7261 tgatgccatc agtcaccact gctcctgcca acacctgccc tcgcttgtta aaaattcgca
     7321 caatatcacc gcttgtaatg cctctgtcag cggcatcttt tgtgtgaatt agcattggtt
     7381 ctctgccgtt tacctcgtaa tattgacgta atgaggagta agcaagctgg ctgtgtaaac
     7441 ggtatttaat atgcggtgta actaatgcca acggctcggc ttcgttggtt ttgcctgaat
     7501 attcgtgatg ttcaaaccaa gtcgggtgtc ctttacaatc ttcataattc atcttggcaa
     7561 tggtttcgga gaaaatctca attttgcctg atggcgttgc caatttgtgt ttaatcggat
     7621 cagtacgata atcttgatag cgaacgaaag tattattttg atgttctgcc tcaaagctca
     7681 acactttatt ttccgcccaa aatgcctcga aatccagcaa tggcgtatta gctttttccc
     7741 ccgcctcaaa ggcaacttgg taaaattcct taagccattc catttcgctt ttgccttcgg
     7801 taaatgcttg ttctttaccg gctcgtttcg ctaattcggc aaaaatatcg taatcattct
     7861 tcgcctcaaa ttgcggttca accacctgtt tcatcgggat aatatgtttt gctacataat
     7921 caccggcaac ggtgagatcg tttcgctcgt agctggtggt tgcgggcaat acaatatctg
     7981 ccattcgagc ggtcggtgtc cagtaacatt cattgacgat catcgtttcc ggctgttgcc
     8041 acgctttcac taaatagttg gtatccgggt ggtgagcaaa cggattaccc cccgcccaat
     8101 agactaattt gatgttcggg taatgtaatg tttgcccgtt gtaatcataa ggctgattcg
     8161 gtttgagcaa cgcatcggca attcgagaca ccgggaaaaa cggcatatcg gggttaggtt
     8221 tacctgcatt gattgcccct aaacgaacac cggaattaac atttagccca ttggtagaat
     8281 aacgataatt taagccgaaa ccgccgcccg gcaagccaat ttgcccgagc atagcggcaa
     8341 gagtcactaa cgcccagtgg ctttgctccc cgtgttgcag gcgttgcaag ccccagccgg
     8401 acatcaacat tgtgcggtga gtaacaaaat catttgctaa ggttttaatc acctcctccg
     8461 gaatgtcaca aatttggctc gcccactctg ctgttttagg taaattatct gcttttccta
     8521 acacataatc agcaaattgc tcgaaaccaa cagtatattt agttaagaag tcgtgatcgt
     8581 gcttgttttc agtaataagg gtgtgggcga tccctaaaat cagtgcaaca tccgtgccgg
     8641 tattaatagg caaccactct gcctctaaaa attgacaggt ctcgcttttc accgggtcga
     8701 tacaaataat ccgtttaccg cttgctttta atttggcgag ataatcaatc ccctccggtt
     8761 cggcagaggt ccacgcaatg cgaagtgtat tcagtggatt agacgaccaa attaccaata
     8821 attctgtgct ttctacaatt gtgtgccaac tggtttgttg agcatacacc tcaatattgc
     8881 ctaatacata aggcataatc acttgcaccg caccggtgga ataatcgcct ttagtattgg
     8941 taaagccgcc tgtgacgttt aaataacgtt gcaaaagcgt gcgagaggcg tgcagtgaac
     9001 cactgctata ccagccgtaa gaaccgccga aaatggattc gctgccatat tgctctctta
     9061 cccgttggat ttcgccggaa accagctcaa aggctttgtc ccaagagatt ctcacccact
     9121 tatctcgccc tcgcaaagtg gtgtctttat tcccttccaa gtagcctttc cgcaccatcg
     9181 gatatttcac ccgaaccggg ctatagagct gatccgccac cacatcttgc aattcgtttt
     9241 ggtgattttt cgctaaactg ccctctgatt tcaccacttt tccgttttcc accgttacat
     9301 ttaatgcacc ccagtgggcg gcggtggtaa tggtattttt cggtttatcc aaaaagacaa
     9361 acttcccttt ttctaatgct gtgttcattt aaattaatgc cttttctgtt acaaaattga
     9421 gaggaattta ctggattaag ccaaaagttg caaccacaag cggttgtttt tagccaaaaa
     9481 tttgcaaaac aaaacccacc taaaaaggtg ggcttcaagg aagttaaacg gcaacttgaa
     9541 cgattacatt gtccgctttt ttcacataac tattgatttg gtcaaagttc atatagcggt
     9601 aaatatcgtc cttatctttc tgcaagttat tcatatagtc taggtactct tgcggtgtcg
     9661 gcaatttacc caataacgca gaaactgcgg ctaattctgc tgaggctaaa tacacatttg
     9721 ccccttgccc taaacggttc gggaagtttc gggtagaggt agaaaccaca ttagcattat
     9781 ttgccactcg ggcttggtta cccatacaga gagaacagcc cggcatctct acccttgctc
     9841 cgcttttgcc gtaaatgctg taatagccct cttcggtcag caagcctgcg tccattttag
     9901 tcggcggagc aatccataat ttagtcggca attcgccctg tgcttggctt aacagtttac
     9961 ctgccgcacg gaaatgcccg atattagtca tacaagaacc aataaagact tcatcaattt
    10021 tatcgccctg tacttgagaa agcaggcgag catcgtcagg gtcattcggt acgcacacaa
    10081 tcggctcttt gatttcatct aagttgatct caatcactgc ggcatactcc gcattttcgt
    10141 ctgcctctaa aagctccgga ttatccaacc acgcttgcat attggcgata cggcgttcta
    10201 gcgtgcgttt atcgtcatag ccttccgcaa tcatccattt taaaagcgta atattagaat
    10261 tcagatactc gataatcggc tctttgttga gcttgatggt acaggctgca gcagagcgtt
    10321 cagcagaagc atcagaaagc tcgaaggctt gttcgatttt cagatcttcc aacccttcaa
    10381 tttctaaaat tcgaccggag aaaatatttt tcttaccttt tttctccacc gtcagcaagc
    10441 cttgctgaat ggcataatac ggaatagcgt gaaccagatc ccgtaaggta atgcccggtt
    10501 gcattgtgcc ggaaaaacgc accaagaccg attccggcat atctaacggc atcacccctg
    10561 ttgccgcagc aaaggcaact aagcccgaac cggcagggaa tgaaatcccg attgggaaac
    10621 gggtgtggga atcgccgcct gtaccgacag tatccggcaa taacatacgg tttagccaag
    10681 agtgaatcac gccatcaccc gggcgaagtg acacaccgcc acggttcata ataaaatcag
    10741 gcaaagtgtg gtgggtaatt acgtccaccg gtttcgggta agcggcagta tggcagaacg
    10801 attgcatcac aagatctgcc gagaagccta aacaggctaa atctttcagc tcatctcttg
    10861 tcattggtcc tgtggtatct tgtgaaccga cagacgtcat tcgaggctcg caatattgcc
    10921 ccggtcgaac gccttctacg ccacaagctc gccctaccat tttttgagca agggtgtagc
    10981 ctttgttact ctctgaaacc gactgcggtt taataaatac atcactttca ggcaagccaa
    11041 gtgctactct ggctttatgg gtcaaaccac gtccgataat cagcggaatt cgcccgcctg
    11101 cacgcacttc atcaagcaat acttcggttt ttagctcaaa ttcggctaag acttcatcgg
    11161 agttgtgttt gcaaattttg cctgcataag ggtaaatgtc gattacatcg cccatattca
    11221 ggttggttac atccacttcg atcggtaaag aaccggcatc ttctaatgtg ttaaagaaaa
    11281 tcggggcaat tttaccgcct aacaccaccc caccggcacg tttgtttgga atgtaaggaa
    11341 tatcttcccc cataaaccaa agcacggagt tggttgcgga tttacgagaa gagccggtgc
    11401 cgactacatc accgacatag gctaacggga aacctttttc ttttaatgct tccagttgct
    11461 taatcgggcc ggtatgaccg ttttcatcgg ggaaaatacc gtcacgttca tttttcagca
    11521 ttgctaatgc gtgaagtgga atatcagggc gagaccaagc gtcttgagcc ggggaaagat
    11581 catcggtatt ggtttcgcct gtgactttaa ataccgttac cgttaatttt tcggcaagtt
    11641 tcgggcgaga ggtaaaccaa tcggcattcg cccaagattc caatacttgt tgtgcaaacg
    11701 gattaccctg atctgcccgt tcttttacat cgtggaaatt atcaaacatc aataatgttt
    11761 tagataaggc ttctaccgca atcggtgcaa gctcagggtt atccaacgca gacaataagg
    11821 tttcaatgtt ataaccacct tgcattgtgc cgagtaattt cactgcgtga gcaggcgaaa
    11881 tgagcggcga tgtggcaacc cctttggtaa tatcggctaa aaaggcggct ttaacataag
    11941 cggcttcatc aacacctgcc ggaatacgat tggtaaaaag atccaataaa aagaccgctt
    12001 gttcagccgg tgggtttttc aataattcaa ccagttgagc cgtttgttcc gcagaaagtg
    12061 gctgaggcac aacacccagt gccgcacgtt catcaacctg ttgttgataa ttttctataa
    12121 aattttccat catcattccc tctccaactt tacatattgg caataatgtc ttgtgcaaat
    12181 tctgaggttg agcgtagagt taccccctcc agcatttccg caaaatcaaa ggtgacagtt
    12241 ttattggcaa tggttttaga caccgctttt accactaaat cagccgcttc aacccaacct
    12301 aaatggcgta acatcatttc cccacttaaa attaatgacc caggattgcc tttattttgc
    12361 cctgcaattt taggggctgt gccgtgtgtg gcttcaaaaa tagccgcttc aaacccaata
    12421 ttcgctcccg gtgaaatacc gattccgcct acttgtgcgg ctaaagcatc agaaatatag
    12481 tcgccgttta ggttcagtgt agcaatcaca tcatattcgg ttgggtgtaa caagatttct
    12541 tgtaaaaagg catcggcaat gctgtctttt ataatgattt cctcaccggt tttcggatta
    12601 gtcaagctca tccaagggcc tttatcaatt aattttgccc caaattcttc cgcaacttgg
    12661 tagccccact ctttaaatgc tccttcggta aatttcataa tgttaccttt atgcacaagc
    12721 gtgagcgatt tacggttgtt atcaattaca tattgcaatg cagcacgcac caagcgttgt
    12781 gtgccttgct tagaaaccgg cttaattccg ataccgcaat cttcggtaaa gcggattttt
    12841 ttcacgccca tctcttgttg taaaaattcg atcactttat tggcttcagg cgaaccggca
    12901 acccattcta caccggcata aatatcttcc gagttttcac ggaaaatcac catatccacc
    12961 agctcagggt gtttaaccgg gcttggcgta ccgtcataat aacgaattgg gcgtaagcag
    13021 ttgtataaat ctaatccttg acgcatcgcc acatttaaag aacgaatacc gccacccacc
    13081 ggtgtcatta aaggaccttt aatcgccacg tgatattggc ggataagctc taaggtttca
    13141 tccggcaacc aagtgttctc accatataat ttattcgcct tttcgcctgc gtaaatttcc
    13201 atccaagcaa tttttcgctt gccttgatag gctttttcta ccgccgcatc tagcactgct
    13261 ttcattgcag gagtaacatc aacaccgatg ccgtcacctt caataaatgg aataatcgga
    13321 ttatccggaa cttgtaaaga accgtcttgg ttcagttgaa tagtttcgcc ttgtggaatt
    13381 tggacttgtg tttgcattga ttttaccccc gtaatgacga aaaagtagtg acgaaaaatg
    13441 aatgttgaca atcagccaac aatggattaa ctataaacag taaatttcta aatgtaaata
    13501 aagcaaaatg ggctgagaga gaatttgtga tctaacgcac atttatgtaa ataaaatgta
    13561 aaaaatcgtt gtgattcttt tggaaatcat ctagtttatc ttataaatct caaataaata
    13621 ggagtaagct atgtcaaaag caacattaac actcgaaaca ggtgaaaaac ttgaactcaa
    13681 tatgcaaaaa ggaaccttag ggtatcaaac gattgatatt cagcctttct taaagcataa
    13741 gttatttgct tatgatcccg gattggtttc gaccgctgta tgccgatcca atatcactta
    13801 tgttgatggc gatgaagggg ttttactcta tcgaggctac ccgattgacc aattagccaa
    13861 acattctgat tacttagaag tcggttatat gctgttattc ggcgaacgcc ctaccaaaga
    13921 agaatacaaa gacttcgttc aactcatcaa aaaacacact cttgtacacg aacaactaac
    13981 caaattcttc tccggtttcc gccgagattc gcacccaatg gcggtgatgt gtggggtaag
    14041 tggagctttg gctgccttct accacgacgc cattgatgta aacaaccaag cccaccgtga
    14101 attaaccgcc attcgtttgt tagccaaaat cccaaccctt gcggcgatgt gttataaata
    14161 ctctatcggt cagccgttta tgttcccaca aaaccactta tcttacgccg gcaacttctt
    14221 atatatgatg tttgccactc cttgtgaacc gtacgaagtg aaccctgtgt tagagcgtgc
    14281 gttagaccga attttcattt tacatgcaga ccacgaacaa aacgcttcga cctcaaccgt
    14341 gcgaaccgcc gcttcatcag gtgcaaaccc atttgcttgc attgctgccg gtattgcctc
    14401 tctctgggga cctgcacacg gaggagcaaa tgaagcctgt atcaatatgt tgaaagaaat
    14461 cggcactgtg gatcgcattc ctgaatttat tgctcgagcc aaagataaaa atgacccgtt
    14521 ccgcttaatg ggctttgggc atcgtgtcta taaaaactac gaccctcgtg cgaaagtaat
    14581 gcgtgaaacc tgccacgaag tgttaaaaga actgaacatt gataacccac tatttgaagt
    14641 ggcattggaa ttagaacgta ttgcgttaag cgacccttat ttcattgagc ataaacttta
    14701 tccaaacgta gatttctact ccggaatcgt gctaaaagcc atcggtattc caacctcaat
    14761 gtttaccgta atgtttgccc tagccagaac cgttggctgg attgctcact ggaaagagat
    14821 gtatctccaa ggcaatatca aaatcgttcg tccacgtcaa atctacaccg gacatactaa
    14881 acgtgatttt gagccaatgg ataaatcata agattggcaa aaaatcgaaa aattttaacc
    14941 gcttgtttcc acaagcggtt atattttgca taaaatttgc aaatcaggct aatttattta
    15001 gcagttgtgt tctaacatct tgaccatttt catcgctttt tacagccata ataaataagc
    15061 cttttccttg acttaatttc tcccaaagat tgccaattaa ggctttttct ttagaatctt
    15121 cattactttt taattgttcc cctttatatt ccacaattaa aattcgacca tcaataagct
    15181 ctacaataaa atcagggtaa aaattctgat gagctaatgg taaagaaaac cctcttttta
    15241 caggatttct taaccaatca tcagaaaaac tcagttgctg ctgattaaaa tggtaagaaa
    15301 cccgtttatc ttccacatca atttcaaaac tttggctatt ttcttgtaat ctaaatccat
    15361 caagtttggc tggataatcc aataaattcc aactttggta atctaatagc acttgtgaat
    15421 cagctaagtc gaattcgcct tgaatattca tacacagttg aggtattact ttaaatattt
    15481 cccctttttc ggcaggagaa gataatattt caactctatt ctggtgaatt tgtaactgtt
    15541 gctcaatttg ctcttttttc ttacctgttg cagttcgaat caacgctttt tctaactttt
    15601 cacttaaatt accttttact tgcactaaaa tgtgaccttc ttgctcggta attttaagtt
    15661 gagaacgttt tgcttcgctt aaatcagaca tttcagggag ttgcgttaat gctaaaactg
    15721 ttgtcggtgt atagaataaa tctccttcgt ttccaatcca attttcttgt tgtgggatac
    15781 gaagcatttc agctacttct aatgcttcaa accccattcc aatcaattta tcttgtaaat
    15841 tacgagccgt ttcgccgaac gacttagagg aaagcggagc ataagcacga tttaaatctt
    15901 caatttgacg gtgtttagca taaggcattc gcaatactcg ccctaatagc tgctccgctt
    15961 ccttgctaga ggaaacattt tgtactgagc aaaaaatata agcaaaaggg caatcccacc
    16021 cttcttttaa tgcctcaacc gtgatgatgt aattgatctt gcattgtgga ttaaataaat
    16081 cgatattatc taattcgtgt tgattaccta tcacaatggc aatctcttct tcatcaattt
    16141 ttaactcatc aattaaatac tgttttaaga cttctactgt tactttgccg tttttcggct
    16201 cagcttgaaa caataaatcg gacgaacgta ctcgctctca tactgtgctt tttgtgctaa
    16261 tgctcctcta ttgattacag ccccatctat tgcttgttgc cagttgtgat gttcggtcag
    16321 cacaataggc aatttgatca tctcttctgc ttttagatgg cttgccgaaa cgtgatacaa
    16381 cacattactt cctgcttttc tatctgtgtt tggcgtagca gtaaattcta aaatagctga
    16441 tggggaaagt tgagatagca catcaaaaga gagtgaagtc cgagcattat gtgcttcatc
    16501 aacaatgacc aaaggctgat aagctcgcaa caaatttgca aaagaacact taattttgcc
    16561 cgtttgtttg gaggttaaac cgttctcttg tagatcagta gtggaaatct tttctaaatt
    16621 tgcctgaata tggggtagta aacgctcaaa atgagctgtt aatttttcat taaaagcata
    16681 gatttttcgc ccatcttgat tttctacccg aaaattttga atagtagaaa cgattacaat
    16741 cgccttatta ccaaaatctt gtgggcgaag taaatcaaaa tcttcagact caataaccat
    16801 tacttctcgg ttaaaagttt tatcaagtac tgcacggtaa gggtgttgcg gattttttaa
    16861 tgcttctgta gtttgggttt taattgtacg agaaggcact ggccacaagg taaccgggaa
    16921 atcgcaatcc aaatactgct ttgcaatacg agcaatacta tgcgaggcta acaacgtttt
    16981 accgccacca gttggaattc gtacacaaac ataaggcaca tcacgcaaat tactgtgttc
    17041 acttgggatc ttgtaactat attcaggttg aatttggcta aatgcggttt ttgcatcaga
    17101 ttgcaaacaa gccgaaaaat agtggctgac acggtttaat gcctcatttt ggtaattttt
    17161 taatttcatt tttttctcct actattaacg agacattaca tcatatggaa tctgtttaaa
    17221 tgtaattttc ttttcagcta actgcacttc tcctaaacgg cacgcttcgc catataccac
    17281 aatatccatt ccctgttgaa taaattcagc aaagtatggt aactccgcca ttaattttcg
    17341 tgtcagaaca ttaccactct gcggacgttt atcgcctaaa attccgttat ataacaaata
    17401 gtaggctttg ccgttgaaag tgccgacaag cggtgatttt tcgctgtttt tttgcaaagg
    17461 gaaatgattt tctaaatacc aaatatgggc ggctaaatcg tcaaaacgaa tgttcggatt
    17521 aagtgaaccg aatgcgtcaa atacttcctc gcctaactca caaaagcgaa acgatccacc
    17581 accttgccaa tttactgctt ttgaaatacc gccttgctca ccttcaatta cttttttcaa
    17641 ccgtgggaca acatgggttt tagcatgttc gccaatctca ataccgatat aacgacggtt
    17701 cattttatga gcaactgctg cagttgtacc tgagccaaga aagctatcga ggacgagatc
    17761 atatggttca gtcgatgctt ctaatacaaa ttagattaat ttttcaggtt taggataatc
    17821 aaatgaatct tctgcaatat cctccccaaa taattctaga tgttcactag cagagtcttc
    17881 atttgttgcc atatcataat gagctctgct aattaagtta tgaatttttt tcttttccgc
    17941 acttcgctca aatactctcc ttggtcgaaa gtctaaactt tttataatat agtaatcacc
    18001 attttttaat tgctcatcaa tacttttttg gctataccgc cattcacctt caatttctac
    18061 cgtattttta ttccattgat cttcaataat taattccgaa atcaacgtaa ttgaactcgt
    18121 ttttttagaa aaaatggttg gcttatataa tccatcacta tgttttttaa attttataga
    18181 acgaggaggg aaaactaaaa tttctcttga atttccagca ttgtataatg gataggtttc
    18241 atcacctgag gtctcaaggt aagttaagtc atttaattca tttaattcat ttttgttttt
    18301 tgcatagcaa aataaattat ctgtaacttt accaactttg cctaaaaaag atggtttcct
    18361 tttcttttcc caaattaagt tagaaatgaa attcttccgc ccaaaaattt catcaagcat
    18421 aattttcaaa tagtgacttt cgttatcatc aagagtgatc caaattgaac catcttcggc
    18481 aagtaactct cgcagaattt caaggcgtgg atacatcatt gaaagccaaa tggaatgctc
    18541 taaattatca tcgtagtggg taaaggccga ttttgtgtta tagggaggat caataaaaat
    18601 acatttgact tgccccgcat aaaagggcaa aagagatttt aaggctgata aattatcacc
    18661 ctgaataatt aaattttgct tgactttaga taaggtttca gcagaagctg agctgtcggc
    18721 tgtcggctgt cggctgtcgg ctgtcggctg tcggctgtcg gctgtcggct gtcggctgtc
    18781 ggctgtcggc tgtcggctgt cggctgtcgg gcaatattat gcgagaagtc cggcaactca
    18841 cgcaataggc aatatggggt ttgttttgct tttttgacgg cttcttcttt gccgtaccaa
    18901 gtaagggttg tcataaaatg cacctgaaaa gtaaaagtgg attattgtaa caagcggtca
    18961 aaaaaataga aagttttaca aaaaattaag caaatttaac cgcttgcaac atagaaaagg
    19021 cacagtttta tactgtgcct ttggttatat gaaattagcc ttgtgtgtat ttaggctctt
    19081 taaatactgt tacttctggt gcttgtccgg tgaatttttc aacctgtacc gtagcggtat
    19141 ttggtgagtt accctgtgct aattttgatg tgccttcatc acgggttagc acgttagggt
    19201 tgccgttttt acatagcggt tgctcgctgg tgccgagatc gagcggatcg taccaagctc
    19261 cttcgtgcaa ggctaatgta cctttgataa tgccatctgt caccaccgca ccggctaata
    19321 cttgaccacg tttgttaaaa atacgtacaa tatcaccgct tgtaatgcca cgagcggcgg
    19381 catcttcagt atggatcaac accggctcac ggtcattaac cgcatattgt ttgcgtaatg
    19441 atgagtaagc taactggctg tgtaaacgcc atttagagtg tggagtcacc aatgccaacg
    19501 gttcttctgc ggtggtttta cccgagtatt cttcgtgttc catccaagtt gggtgacctt
    19561 tacagtcatc ataattcatt ttggcaatca cctcagagaa aatctcaatt ttgccggacg
    19621 gtgtgcctaa tggatttagg agtgggtcat tacgaaattc ttcataacga acccattttt
    19681 tcgctttgtc tgatgcttta aaagaaagtg gtttattctc ttgccagaat ttctcgaatt
    19741 tcggcataat cacacgattt ttgcgtgctg cctcaaatgc agtttgatag aaactttgta
    19801 gccaatccat ttcagatttg ccttcggtaa attccgcttc tttgcctgca cgtttggcta
    19861 gttcggcaaa aatatcgtag tcgttttttg cctcaaattg cggttcgacc acctgtttca
    19921 tcgggaaaat attcatcatt gaataatcgc ccgacatagt taagtcatta cgctcatagc
    19981 tggtggttgc cggcagcacg atgtcagaca tacgagccgt tggtgtccaa tggcattcat
    20041 tgacgataat agtatccggt ttttgccacg ctttcaccaa agtgttggtg tcttggtggt
    20101 gggtaaacgg attaccccct gcccaataga caattttgat atcaggataa gtaatttgtg
    20161 tgccattgta atcaatggtt ttgcccgggt tgagcagtgc atcggaaata cgagccaccg
    20221 ggaatgaaga ttttgatgtt tcatctaacc aggttttcgc tccggcttct actgccggat
    20281 ttgctgtgat agagcctaaa atgccccctg tggcactcgg cacgccgccg tttgagtaat
    20341 ggtagcttaa accgaaacca ccacccggta agccgatttg acctaacatt gcagctaggg
    20401 tgactaacat ccaatgccct tgttcaccgt gtcgttggcg ttgaatcccc cagcctgcca
    20461 ttaacattgt gcgtttagat tggaaatcag tcgctaattt tttaatggtt tcttccggca
    20521 caccacaaat ttgacttgcc cattttgcat ctttcggttg attgtctgtt ttaccgagca
    20581 gatattcttc aaacttctca aaaccggtgg tgtatttttt aaggaatgct tgatcgtgtt
    20641 tgccttcagc gactaaggta tgagccatac cgagcattaa cgcaacatca gtgccggtgt
    20701 ttaccggtac ccattctgca cctaaaaatt cgcaagattc actttttacc gggtcaatac
    20761 agataatgcg tttcccgctc tctttgagtt ttttgaagta ttcaatacct tgttgatcgg
    20821 tagaagtcca cgcaatgcgt agcgtattta acgggttagc tgaccaaagc accacaatat
    20881 ctgaactttc taaaatcact tcccaactag tttgctgttc gtacacctcg attgtaccca
    20941 agacgtgtgg cataatcact tgagcagcac cggtagaata gtcgcctttt acaccaacaa
    21001 atccgccggt aacatttaaa tagcgttgta acagtgtacg ggaagcgtgt aatgccccag
    21061 aactatacca accgtaagaa ccaccaaaaa tagcattcgc cccgtgagcc tcacgaacac
    21121 gtttcatttc attcgcaact aattcaaatg ccttatccca cgaaactcgc acccattcat
    21181 cacgcccacg tagagtagta tctttattac cttctaagta gcctttacgc accattgggt
    21241 attttactcg tgtttcaccg tgtacttggt ctgctaccac gtgttgcaat tcatttggca
    21301 cagaaatctc aaaaacagaa tcagatttca ccactttgcc attttctacc actacaccta
    21361 aaggccccca gtgggcggca gttactactg ttttcatctc ggctgctttg gcactggtgg
    21421 aagctaatgc ccccactaca ccggtagtac cactggctaa acctgcaccg gcagctaagc
    21481 ttaatgatga attttttaga aaaccgcgac gacttacgtc aatattgtct tgttttttca
    21541 taataaacct cgtttgaagt taagttaaaa atagacacct ttctaaagtc gagtggataa
    21601 accatttctc gtgtatccat tggtaaaagc accgacggta atttttgcaa aatgttagga
    21661 aaaaatgacc gcttgtagta ggtgctttac ggcttgctac catatctctg ctctcagcag
    21721 acacttaggc tcacaagctc ggtatcctct aagttgcaat taatgggaac tgcctgctac
    21781 atcttttgca ttacgttgga gatagatagt caccgcacgc acatcatcag ccgacataga
    21841 tgttctgtct ttcattgaat ttaccacccc aatccattga tttgcggtgt aatgttctgc
    21901 cccaatcggt gcatggcaac cgctacagtg tgtttggttt aagttatcgc caaaatgatt
    21961 tagtgcagta atattggcag tgactgcatt tttaggagca gtaatttcaa aattgatttc
    22021 tttccaattt gagttggtga cattatcaaa cactgttttt gtgacattca ctttgctttg
    22081 agcgtcatca ggtagaagag caaccataat acgcttgcct aaatccatat acaccacaga
    22141 ttccgcacct tcttgttgcc agccattaac cgttgcttta acctgctcgc cttctgctgt
    22201 ccattgatgt aattctgcat aaggtaacaa gcgaatttct ccaccttgag cgagctgcac
    22261 tggagtcatt gcgagcgtat aaagggtttt atcatttgtg ctaaattccg caccgtgttt
    22321 agctaattcg cccattgctg cggcattatc taccggcaca tcaggcataa aatgggcaat
    22381 tcctttatgg caatcaatac aggtttgatt agtttcttgg gctagtttgt gcattttctg
    22441 tgccgcttct gtttgttcag aaagtaccat cgcatcaaaa ctatgacagc ttttacaggt
    22501 catagaatcg ttttctttca tttctgccca aacacgttgt gccatttcta gacgatgggc
    22561 ttcataggct tcttgatcag gtaatttatt ggttacaacg gtgtgccaaa catcttttaa
    22621 tgcgatgatt ttagctttga cataatgcaa gccgtcttgt ggtagatggc aatccgaaca
    22681 ctcggctcga attcccttac ggttggaaaa atggacactg ccttcccact ctgcctgtgg
    22741 gtgagtcata gaatggcagc tcacacaaaa ttctgttgag ctggtggctt tcattgcata
    22801 ttgtgtgcca cctaataccg cagcacctaa tgccataata ccgacaaata cagcaatttt
    22861 tttcatctta gccataaatt accccactta atacactaaa aattaaagac agaggcattg
    22921 tattaactcc caagaggtat aaaaataagt aaaaatacct attacctcga aagagtgaga
    22981 ataatttgat ctaaggcaaa aatatgtagt gaaattttag gctttttcag agaaccacgg
    23041 cggtaagata aattgtgcat tggcaaacaa ctccggtgca atcacacggc tctgcccttg
    23101 ttggatttgg taaaccaact gtggcaagct gatagataag tcgtgggttt ctgcgtaagt
    23161 taatccaatt tggctatcgg tattaaaata gtaagtgccg tttaccccat aatgtggctg
    23221 taagcggatc gcattggaga cggctttaaa atgccgtggt gaaacactct gtttccacgc
    23281 atttgccaga atattcgctt ggtcataagc aatactggct tgggaataag tgggcgattt
    23341 gccgaaaaac cgttcgtaat gttggctaaa ctgtctgcct aaataatttt cgcttaaccc
    23401 actattggta ctccaaagaa cgccttcgca aagtttctcg tgtggcaaaa acgccgaagg
    23461 tgcataaata ctgtaaataa tggcatttgt tgggttgcga atgaacgttt gataaaactg
    23521 tacaatatct tctgcaaaat aagaggcaaa cacaataatg gaaggtgcga gattatgcac
    23581 ctgtgccatt aatgtggcat aattatcttg ctcttgggtg agttccagat aatccacatt
    23641 ccagccttgc tcccgcaaac ttagggttaa actttcaata ccgatatcaa cttttt
//
LOCUS       DANMCL010000035        23552 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.035, whole genome shotgun sequence.
ACCESSION   DANMCL010000035 DANMCL010000000
VERSION     DANMCL010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23552)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23552)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23552
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.035"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            62..1207
                     /gene="lldD"
                     /locus_tag="PXF40_001235"
     CDS             62..1207
                     /gene="lldD"
                     /locus_tag="PXF40_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent L-lactate dehydrogenase LldD"
                     /protein_id="HDL5802577.1"
                     /translation="MIISSANDYRRAAKRRVPPFMFHYADGGSYAEQTLRRNVSDLED
                     IALRQRVLKDMSQLDTGIELFGEKLSMPVTLAPVGALGMYARRGEVQAAKAADNKGIP
                     FTLSTVSICPIEEVAPAIKRPMWFQLYVLKDRGFMKNALERAKAAGCSTLVFTVDMPT
                     PGARYRDMHSGMSGPYKDIRRVLQAMVHPFWAWDVGIHGKPHTLGNVSNYMGKPIDLN
                     NYIGWLTDNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIIVSNHG
                     GRQLDGVLSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMLALGADCTMIGRSFVY
                     ALSAAGQAGVENLLDIFLKEMKVAMTLTSNAKISDIGRDALVDLSNL"
     gene            complement(1261..1530)
                     /locus_tag="PXF40_001236"
     CDS             complement(1261..1530)
                     /locus_tag="PXF40_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802578.1"
                     /translation="MLSEERFGFFYIFIFIYFSLLSLSIGYIRPELRTTYDYLEIENK
                     RYYVLSIHRNNIYVLGEKTKDNDEFLFFNQDTLKYYRINITKMPN"
     gene            complement(1605..1991)
                     /locus_tag="PXF40_001237"
     CDS             complement(1605..1991)
                     /locus_tag="PXF40_001237"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802579.1"
                     /translation="MTNQKFINSSLTLAFFTLISFSTAYCYAWGIAAFHGYPWWHVEV
                     GNAGIARALAYVFGTFLTIFLFYLIGYALVNKVFKLHYFKYLGWLRVSVLVTIFSLPV
                     MISFYLFIGKVPMYLHLLYLGTTTSI"
     gene            complement(2244..3074)
                     /gene="fghA"
                     /locus_tag="PXF40_001238"
     CDS             complement(2244..3074)
                     /gene="fghA"
                     /locus_tag="PXF40_001238"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HDL5802580.1"
                     /translation="MQQFENYRCFSGEQQVWQHFSASLNCEMKFAIYLPQSAKTQKLP
                     VLYWLSGLTCTEQNFITKSGFQRYADEHHLIVVAPDTSPRGVNVANDEAYDLGQGAGF
                     YLNATQGEWTTHYQMYDYIVSELPTLINAHFPTNGKQSIFGHSMGGHGALTIAFKNPG
                     QYQSVSAFAPIVAPTQVPWGQKAFLAYLGEDQTAWKAYDSVALLEKYRPSLPILIDQG
                     SQDSFLSDQLKPEIFCETADRLGIPYQFNLRDGYDHSYYFISSFIGEHIAFHAKHLKD
                     "
     gene            complement(3154..4212)
                     /locus_tag="PXF40_001239"
     CDS             complement(3154..4212)
                     /locus_tag="PXF40_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HDL5802581.1"
                     /translation="MAYPIKSYATFSATTPLAPHSFERRELLEDDVLIDILYCGVCHS
                     DLHMARNDWGWTQSYPLVPGHEIIGRIIKVGKNAKKFQIGDLVGVGCMVDSCRECSPC
                     QHGLEQYCEVGNIGTYGGIDRFDGTPTQGGYSTCVVVSEDFVLKVSENLDTKAVAPLL
                     CAGITTYSPLRHWNVKAGSKVAVVGLGGLGHMAVKLAKAMGAEVTLFTRSLGKADDAY
                     RLGASRVVLSTDEKQMADVANTFDLIIDTVPYTHDLKPYIPTLALDGTLVLVGLVGEL
                     EQTINTVPMILGRRSISASVIGGIQETQEMLDFCAEHNIVPDVEMIDMQNINDAYERM
                     LKSDVKYRFVIDMGSLKG"
     gene            complement(4399..5334)
                     /locus_tag="PXF40_001240"
     CDS             complement(4399..5334)
                     /locus_tag="PXF40_001240"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03571 family LLM class oxidoreductase"
                     /protein_id="HDL5802582.1"
                     /translation="MNTLSPIFSQVFGQNQLTLGLIAPFMGYQNHIPDNLTTIADNAR
                     LAENLGFSALWVRDVPFYDPHFGDVGQGLDPMVTLGFLSAHTQNIALGTAGLIAPLRS
                     PIHIAKMATSVDSLSHGRFLLGLSSGDRPVEYPAFGADFASRSERFRESIDLINTLTE
                     QDFPHFKGKHYADLTDNLDLLPKPKHRLPIVAIGRARQEMDWLANVPDAWIWHGVNPA
                     DTANIINTLADLRQKDTPTAFGYAQFVEVLDDKNAKAQLFNNIYLRGGAKGLADFWAK
                     EQEKGVKHLALNLKPTQRPADEVLTELAEYALTQF"
     gene            complement(5614..5925)
                     /locus_tag="PXF40_001241"
     CDS             complement(5614..5925)
                     /locus_tag="PXF40_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5802583.1"
                     /translation="MSETEKQAINAPNAVMNGYLTMHYPDWFKPDGIYFNDGAFESFE
                     SSHKLTKDGKIRLVPTAGHTLGHLAVVVDMGEHYILIGGDASYSEQDMLAGNIDGVCN
                     A"
     gene            complement(5932..6324)
                     /locus_tag="PXF40_001242"
     CDS             complement(5932..6324)
                     /locus_tag="PXF40_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5802584.1"
                     /translation="MIKVHCLTTGWVQIKIHHQVARFFARPARVLDVLTDKKWSPKLP
                     IGCWLIEHDDGLILVDTGESSRANDKGYQPWWHPFMQFCERRGVKKHEEVGEILKANG
                     FDPLRIDTVVMTHMHGDHAGGLPNFPNS"
     gene            6456..7016
                     /locus_tag="PXF40_001243"
     CDS             6456..7016
                     /locus_tag="PXF40_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HDL5802585.1"
                     /translation="MNDLRVIKTHLAIQNALIELLDEKLFEKVQVQEIIEKALINRTT
                     FYRYYSGESDLVGKLIKEVKAEYQDLLKKRFESGNLLRFMQTIGNRLLEKRRLILALW
                     QIKTPRHHLYDDMHMLLKNAFIAHAKRITSDDKNWAEKNWDYQAHIFATIALESHKYY
                     FEQGKLLPIPQVFEEWIEMVQVLKSV"
     gene            complement(7082..8071)
                     /locus_tag="PXF40_001244"
     CDS             complement(7082..8071)
                     /locus_tag="PXF40_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012073273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HDL5802586.1"
                     /translation="MSKQIQFTKTGSPDVLQIVDVAIPAPKAHEVQIQIQAIGLNRAE
                     MMYREGAYVIDPVFPATLGYEGAGVIVAIGEGVNEVAISDKVSIIPSFMFTEYGTYGE
                     IVNMPKHAVVKHPDNLSMEQASASWMAFVTAYGGLIEFGKVQKGDFVVLGGATSSVGL
                     ASIQIAKMQGATVIALSRTHAKGDVLLEKGADFVIATSEDDVTAKLFEITNGKGVNVV
                     FDPVGRKEAAKIINAMAQDGRYIIYGALSHDDIAVPVFPILGKHLTVRGYELFEITTV
                     PEKLAQAKTFVYDGLASGQLRPEIDKIFAFDEMVKAHEYMASNQQIGKIVVKV"
     gene            complement(8285..9202)
                     /locus_tag="PXF40_001245"
     CDS             complement(8285..9202)
                     /locus_tag="PXF40_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5802587.1"
                     /translation="MTFIIGILAGVLIAFQSAINARLRMHVGAAFLTSFVSFSVGLLF
                     LLGLSLIMQQTPAFSLDNLGNVPLWAWTGGLLGMVGLTANVLIFPKLGGVQTAVMPIL
                     GQVLMGVLIDTFAWLNSPYIAFTASRLFGIGLVLFGVWIAVVLPHLSGLKRKENANLW
                     LWRAVGILGGTALATQAAVNGEFGRQPGSSLGAATVSFGVGAIGLLLVVLFYEKSLPK
                     LCQPTEGKPFWIWSGGILGSLFILAGVWLVPQIGTGSVVMLVLSGLICGSLLVDKFGL
                     FGITQKPILPLQIIGVTLLLAGVAFIRLL"
     gene            complement(9338..9997)
                     /locus_tag="PXF40_001246"
     CDS             complement(9338..9997)
                     /locus_tag="PXF40_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003672168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5802588.1"
                     /translation="MQFFNKEDVINAFHYRASTRSYDGSRKIPAEDFNYILELGRLSP
                     SSVGSEPWQFLVLQNPELRQKIKPYCWGIPTMETSSHIVVILAKKNARYDSQYFSEIM
                     DRRGLQGEAREKAMAVYKKFQEKDIGILDSERSLFDWASKQTYIALGNMMTGAALIGV
                     DSCPIEGFAYQEVNDILAAEGLFDPSEWGVSVMCTFGYRDKEIRQKARKDFETVVKFI
                     E"
     gene            complement(10182..11246)
                     /locus_tag="PXF40_001247"
     CDS             complement(10182..11246)
                     /locus_tag="PXF40_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase"
                     /protein_id="HDL5802589.1"
                     /translation="MAKFRKLFTPFNIKNLALKNRVVMPPMCQYSATNGVPNDWHFVH
                     YTSRAVGGVGLIIVEMTNVAPNGRITPNCLGLWNDEQQQAFKKLVDSVHAQGAKIGVQ
                     IAHAGRKAQDEPDAVAPSAIHYGELDYAGQNLITPRELTTDEVKALVQAFKDSVKRAV
                     EAGFDTIEIHGAHGYLIHQFYSPKSNQRSDEYGQDKMLFGEQVIQAAREVMPSEMPLI
                     VRISAQEYGENGFGLDYGLQVAKRFADAGADVLDISGGGDGVLHAGNHPEFYAGYQVD
                     FARQVKLATGKPVIAVGMLDNPAVGDHILGMGDADLVAVGRALLRDPYWVLNAQYDQN
                     AADSSEMQFVPKQYERGLFM"
     gene            11337..12245
                     /locus_tag="PXF40_001248"
     CDS             11337..12245
                     /locus_tag="PXF40_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802590.1"
                     /translation="MSDIRTLDFNLLKAFVVLLDECNVSRAAQRLSITQPAMSGILNR
                     LRESFNDPLFVRVQHGMQPTDRALQLGQTARNILQDISSMLQPPILEPEHLNMTLRIA
                     AMDYVQQIIALPLILRLRRLAPNVKVALLPVQGQNIKTLFEQKKIDLALVSRQHLSTD
                     TLKTVLYEERYVCAMSKTHPMAQTPLSLDQFCNLPFAMLSYNGGEFSGATDLALQKIG
                     LQRKVMVSVNHISLLPQLLQGSDLVAVLPERLAKTLPNVYLQPPPIEVEGFTMMMAWH
                     ERTEQDTAHRWLREVLQGVVKPKQAL"
     gene            complement(12315..12866)
                     /locus_tag="PXF40_001249"
     CDS             complement(12315..12866)
                     /locus_tag="PXF40_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5802591.1"
                     /translation="MAKQIAVLIGSGSKTSFSHLTVRHLQKMAPASIQLNIVDIADLP
                     LYDRDLDENSPAQYTRVREAVAVADGVLLVTPEHNASFSAMLKNAIDVVSRPMGQSKW
                     IGKPAGIVTVGASPAGGVRAADQVRTITSGSFVNMPTLPFALNVGNLFTGVFDEQGEI
                     ASETLKSSMQNFINAYAQFVEKY"
     gene            13058..14419
                     /locus_tag="PXF40_001250"
     CDS             13058..14419
                     /locus_tag="PXF40_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HDL5802592.1"
                     /translation="MLFLNKIKQLFIFAFTLVLSACSLVVYKPVETIKQVNVERGYRQ
                     KNVIAESAKDGNIVVIMFSGGGTRAAALGYGVLEEFKKVRVKETNKGNTLLENIDIAF
                     GVSGGSILATYFALEGKDIIPKFADRFLKANFQKDIITEVFSLSNLPRLSSPQYGRGD
                     LLQERLNFALYHGKKFGDLVKNRKGPFAVISATDMNIGQKLTFTQETFDGLCLNLNDL
                     EISRAVAASSSVPLIFAPLTLNNNGGNCHFSMPQEFSAREKAIDGLITKNIEETNHIL
                     SLYQDSKERPFIHLVDGGLTDNLGLASVLEISDVMGIEEMYQYIHQLRVKNIVVINVN
                     AQNEVSSEIDKTANVPGVADVVNTIVNVPIDRTTQINLQRYRQFTDGWNEYANKQPSK
                     IEMHFVSLGLKELPDGDLKKDVLNIATSFYLPEEDVDKLREAARVLLQQSQEYNAALK
                     TLQ"
     gene            complement(14467..14964)
                     /gene="rraA"
                     /locus_tag="PXF40_001251"
     CDS             complement(14467..14964)
                     /gene="rraA"
                     /locus_tag="PXF40_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HDL5802593.1"
                     /translation="MRIDTSALCDLYSDQVDVVEPIFSSFGGASSFFGKITTVKCFES
                     NGLIAEVLEEEGEGRVLLVDGGGAVRRALIDAELAQLAVDNGWEGIIVYGAVRQLDIL
                     ERLDIGIHALAPIPVGADNTDIGEVDTPVNFGGVTFFPEDYVYADLTGIILSQELLDL
                     NDISE"
     gene            complement(15062..15964)
                     /locus_tag="PXF40_001252"
     CDS             complement(15062..15964)
                     /locus_tag="PXF40_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel"
                     /protein_id="HDL5802594.1"
                     /translation="MTEKVTETAPNIDVVAETEKVIHKVSNMNIETMLNEWIIPYGTK
                     ILLAIAIFVVGKFLARLISRLLGKAALKSTKDEMLQSFIVSISYFLLLLIVVIASLSQ
                     IGINTSSLVALIGAAGLAIGLSLQNSLQNFAAGVMLLIFKPFRKGDLIETGGMTGVVE
                     QMGLLVLELRTGDNKTVLLPNGKVFSDSIINYSNNPTRRIDFTFDISYESNLKEAKEI
                     IQRILDANTYVLKDPAPVVAVGALAPHSVQLVVRPWVQTPNYWAAYWEIIEQVKLAFG
                     EAGISIPYNQMELHIKSGSLENKA"
     gene            16073..17035
                     /gene="rluC"
                     /locus_tag="PXF40_001253"
     CDS             16073..17035
                     /gene="rluC"
                     /locus_tag="PXF40_001253"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HDL5802595.1"
                     /translation="MTTEKVISAGVQFFTISEDEAGQRLDNFLLAKLKGVPKSLIYRI
                     VRKGEVRVNKGRNKPEYKLQPDDLVRVPPVRVAEKNEAPISTKLNKVAELESQILYED
                     ESMLVINKPSGIAVHGGSGLSFGVIEALRALRPQARFLELVHRIDRDTSGILLVAKKR
                     SALRSLHEQLREKVVQKDYLALVRGQWQAHTKVIKAPLLKNELASGERIVRVSEEGKP
                     SETRFSIEERYANATLVKASPITGRTHQIRVHTQYAGHPIALDDKYGDAEFDSKMKEV
                     GLQRLFLHAHAIRFEHPKTGEEMVITAPLDKTLKGVLAKLRANY"
     gene            17144..18002
                     /gene="folP"
                     /locus_tag="PXF40_001254"
                     /pseudo
     CDS             17144..18002
                     /gene="folP"
                     /locus_tag="PXF40_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248541.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
     gene            18002..18349
                     /locus_tag="PXF40_001255"
     CDS             18002..18349
                     /locus_tag="PXF40_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HDL5802596.1"
                     /translation="MTTLVYGIKNCDTVKKALKWLEDHNQNPQLHDYRVDGLNADWLV
                     EMEAKFGWENLVNKRSTTWRNLDEEIKNNLNRESALKVLTEQPTLIKRPIVIKEDIAL
                     IGFNEKEYVAAFN"
     gene            18479..19627
                     /gene="dapE"
                     /locus_tag="PXF40_001256"
     CDS             18479..19627
                     /gene="dapE"
                     /locus_tag="PXF40_001256"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HDL5802597.1"
                     /translation="MKNEIISLAQNLIRRDSISPQDKGCQQEIAQRLEKLGFNIEWLP
                     FGDTLNLWATHGSENGKTEPCIVFAGHTDVVPVGDESQWAYPPFSAEIVDGMLYGRGA
                     ADMKGSLSALVVAAETFVQHHPNHKGKVALLITSDEEAAAKDGTVKVVETLMARNEAV
                     HYAVVGEPSSSKVFGDVIKNGRRGSITADLYIEGIQGHVAYPHLAENPVHTSLGFLTE
                     LTTYQWDNGNEFFPPTSLQIANIKAGTGSNNVIPGELYVQFNLRYCTEVTDEIIKAKV
                     AEMLEKHGLKYRISWNLSGKPFLAGNGKLVEAALQAVENVTKITPRLDTGGGTSDGRF
                     IALMGAEVVEFGPLNATIHKVNECVSADDLAHCGEIYYQILEKLLATA"
     gene            19738..21072
                     /locus_tag="PXF40_001257"
     CDS             19738..21072
                     /locus_tag="PXF40_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HDL5802598.1"
                     /translation="MQLYSYICLLFGLAMFISFFTRKLNENIQTTIAITASALVGSLL
                     ILTFGSLGWFNVDKLAISIFEQLDFKSFLLNGMLGFLLFAGSLGIKLPLMKEQRREIA
                     VYALFSTLVSTFLIGALIYGVARLLGLELGFVYCLLFGSLISPTDPIAVLAIIKSLKA
                     PKRLSMHVEGESLFNDGIGLVIFTTIFAVAFGGQEPNLSGITGLFLQEAVGGIVFGLL
                     TGFVAHKFISATDDGSLEILITLTIPTVGFVIANYLHVSGALTMVVAGIMIGNWTRRS
                     GFSEQSQKYLDHFWEMIDHSLNYLLFLLIGLSTLLVDFTFIGGVLMLAAIPICLLARY
                     ISLWIPYQVLKRFRTYNPYTLKIMTWGGLRGGLALAMALSVPAGAAVVSSSEGNLDVR
                     DLILLMTYAVVTFSILVQGSTVEPMIKKSKLVDPRKVALNKLGAPDDVIPHI"
     gene            21179..21688
                     /locus_tag="PXF40_001258"
     CDS             21179..21688
                     /locus_tag="PXF40_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HDL5802599.1"
                     /translation="MLFTGLLCGFLLGFVMQRGRFCITGAFRDLYVTKNSRMFVALLI
                     AITVQSIGIWLLYEAGSFSSPAEDLPLLAVIIGAFLFGIGIIYAGGCATGTWYRAGEG
                     LIGSWVALVIYGLFSASMRTGVLAPLNQELKSNVIQHRTIYETFGISPWVLVFILSVI
                     TLALSAHSI"
     gene            21717..21938
                     /locus_tag="PXF40_001259"
     CDS             21717..21938
                     /locus_tag="PXF40_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HDL5802600.1"
                     /translation="MNVRLPASGLVCPFPLVEAKAAMAKLNKGDSLTIEFDCTQATEA
                     IPNWAEEEGYEVTDYQQLGDALWEITVVK"
     gene            complement(22003..23511)
                     /locus_tag="PXF40_001260"
     CDS             complement(22003..23511)
                     /locus_tag="PXF40_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HDL5802601.1"
                     /translation="MSKCPVTHLTMNNGAPVVDNQNSLTAGPRGPLLAQDLWLNEKLA
                     NFVREVIPERRMHAKGSGAFGTFTVTNDITKYTRAAIFSQVGKKTEMFARFTTVAGER
                     GAADAERDIRGFALKFYTEEGNWDMVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNMRS
                     ATNNWDFWTLLPEAFHQVTIVMSERGIPASYRHMHGYGSHTYSFINAANERFWVKFHF
                     HTQQGIKNLTNEEAAAIIANDRESHQRDLYEAIERGDFPKWKMFVQIMPETDADKVPY
                     HPFDLTKVWPKSDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGISVSPDRMLQ
                     ARLFNYADAQRYRLGVNHHQIPVNAPRCPVHSNARDGQGRVDGNYGSTIHYEPNSFGK
                     WQEQAQYAEPPLKINGDAAHWNYREDDADYFSQPRVLFNMMNDEQKQALFNNTAAGMG
                     DALDFIKYRHIRNCYACDPAYGEGVAKALGMTVEDAIAARATDPALGQPGLL"
BASE COUNT         6692 a         4966 c         5190 g         6704 t
ORIGIN      
        1 cttattttta ttttaaagta gaatagccgc acttttttct taatgattta tgaggtttta
       61 aatgatcatt tcatctgcaa acgattaccg ccgtgcggca aaacgtcgtg ttcccccttt
      121 tatgttccat tatgcggatg gcggttctta cgccgagcag accttacgtc gtaatgtgag
      181 cgatttggaa gacatcgccc tgcgtcaacg tgtgttaaaa gatatgtcgc aactagacac
      241 cggcatcgag ctgttcggcg aaaaactgtc tatgccggtg accctcgccc ctgtcggtgc
      301 attaggaatg tatgcccgcc gtggcgaagt gcaagcggcc aaagccgcag ataacaaagg
      361 tattccgttt accctttcca ctgtctctat ttgcccgatt gaagaggttg caccggcaat
      421 caaacgcccg atgtggtttc agctctatgt gttaaaagat cggggcttta tgaaaaatgc
      481 attggaacga gccaaagccg ccggttgttc cacgctagtg tttaccgtag atatgccgac
      541 ccccggcgca cgttatcgtg atatgcactc cggaatgagc ggcccataca aagacattcg
      601 ccgtgtgttg caggcaatgg ttcacccgtt ttgggcgtgg gacgtgggca ttcacggtaa
      661 accccacacg ttaggcaatg tgtcaaacta tatgggtaaa ccgattgatc tgaacaacta
      721 catcggctgg ctgaccgata atttcgaccc atcaatttcg tggaaagatt tagagtggat
      781 tcgtgaattt tgggacggcc cgatggtgat caaaggcatt ctcgacccag aagatgctaa
      841 agatgccgta agatttggtg cggacggtat catcgtctcc aaccacggtg gtcgtcagtt
      901 agatggggta ctttcttctg ccaaagccct gccaagcatt gccgatgcag taaaagggga
      961 gatcaaaatc cttgccgact ctggtatccg caacggctta gatgtggtga gaatgctggc
     1021 tctcggcgca gattgtacga tgatcgggcg ttcctttgtt tacgctctta gcgccgccgg
     1081 tcaagccggt gtggaaaacc tgctcgacat cttccttaaa gaaatgaaag tggcgatgac
     1141 acttaccagc aatgctaaaa ttagcgacat cggcagagat gctttggtag atttaagtaa
     1201 tctttagctc aaatagccac aatccgcacg ttttaggtgc ggattgttat tttagatagg
     1261 ctaatttggc attttggtaa tattaatgcg gtaatatttc aatgtatctt ggttgaaaaa
     1321 gagaaattca tcgttatctt tagttttttc gcccagcaca taaatgttat tgcgatgaat
     1381 agataagaca taatatcgct tattttcaat ttcaagataa tcatacgttg ttctcagctc
     1441 agggcgaatg tagccaatac tcaaagaaag taagctaaaa tagatgaaaa taaaaatata
     1501 gaaaaaaccg aagcgttctt cgcttaacat tttttgaata tctaagtgga atacgcggtg
     1561 gccccaatgt ttgtgaaata ataatactga tagggtagtt gtccctagat agaggtagtt
     1621 gtccctagat agagtaggtg taaatacatt ggcactttgc caataaacag atagaaactg
     1681 atcattactg gcaagctaaa aatagtaaca agaacactca cccgtagcca gccaaggtat
     1741 ttaaagtaat gcagcttaaa aactttatta actaaagcgt atcctatcaa ataaaaaaga
     1801 aagatagtta aaaatgtgcc aaaaacgtag gctagtgcgc gagctatacc ggcattacca
     1861 acctcaacat gccaccacgg gtagccatga aaagcagcaa taccccaagc ataacagtaa
     1921 gcggtagaaa aagagattaa agtaaagaaa gcgagagtaa gagaagagtt gatgaatttc
     1981 tgattagtca taacagtaaa tagattgcac ctacttagtt aaagatgaaa cacaagaaag
     2041 cagactgagt ttagcttcca cccaactcct ttgtttagag gagaacttta ttaaagcacg
     2101 acttttgttg tatttcaaac ctttgttttt atacaaaaca accgtgttgt aaaaaatgat
     2161 cgtaaactga ccgcttgtaa tgcactctga atatatcgaa acatgataaa aatgataaag
     2221 catgtttcga taatttactg tctttagtct tttaaatgtt ttgcatgaaa ggctatatgt
     2281 tcaccgataa agctactaat gaaatagtag ctgtgatcgt aaccatcacg taaattgaat
     2341 tggtagggta ttccaagtct atctgcggtt tcacagaaaa tttccggctt taactgatcg
     2401 ctcaaaaagc tgtcttggct gccttgatcg attagaattg gcaagcttgg gcgatatttt
     2461 tccagcaatg ccacgctatc atacgccttc caagcggtct gatcttcgcc taaatatgct
     2521 aaaaatgctt tttgccccca aggaacttgg gttggggcga caatcggtgc aaatgccgat
     2581 acactttgat attgccccgg atttttaaat gcaatggtta aggcaccatg tccgcccatt
     2641 gaatgcccaa aaattgattg tttaccgtta gtcgggaaat gagcattaat caatgttggc
     2701 agttcgctga caatgtaatc atacatttgg taatgtgttg tccattcgcc ttgcgtagca
     2761 tttaggtaaa atccggcacc ctgacctaaa tcataagcct catcattagc gacattcaca
     2821 cccctagggc tggtatccgg tgcgaccaca atcagatgat gttcgtcggc ataacgttga
     2881 aagccagatt tagtgatgaa gttctgctcg gtacaggtta aaccagaaag ccaatatagt
     2941 acgggtagct tttgtgtttt agcagattgc ggcagataaa tagcaaattt catttcacag
     3001 tttaagctgg ctgagaaatg ttgccaaacc tgttgttcac cgctaaaaca gcggtagttt
     3061 tcaaattgtt gcataatatt ccttacaagc ggtttaattc cgctgatttt ttgcaaaaat
     3121 aaaggcggaa ctcaccgcct ttatattgta atatcaacct ttcaaacttc ccatatcaat
     3181 cacaaaccga tatttcacgt ctgatttcag cattcgttca taagcatcat tgatgttttg
     3241 catatcaatc atttccacat ccggcacaat gttgtgttcg gcgcagaagt cgagcatttc
     3301 ttgagtttcc tgaatgccgc cgatgacaga ggcggaaata gagcggcggc ctaaaatcat
     3361 cggtacggtg ttgatggttt gctccaactc accgaccaag cccaccagca ccaatgtgcc
     3421 gtccaacgct aaggttggga tataaggttt caagtcgtgg gtataaggca cggtatcgat
     3481 gattaaatca aaggtatttg caacgtctgc catttgcttt tcatcggtag aaagcaccac
     3541 acggcttgcg cccaaacggt aagcatcatc ggctttaccc agtgagcgag taaaaagcgt
     3601 aacttccgct cccattgctt tggcaagttt aaccgccata tgccccagtc cgccaagccc
     3661 cacaacagcg acttttgagc cagctttgac attccaatga cgcaggggcg aataggtggt
     3721 aatgcctgca cacaaaagag gggcaaccgc tttggtgtcc aagttttcag agacttttaa
     3781 tacaaaatct tcactcacca ccacgcatgt gctgtaaccg ccttgtgttg gtgtgccgtc
     3841 aaagcggtca ataccgccat aagtgccgat gttgcccact tcgcagtact gctccaaacc
     3901 gtgctggcaa ggactgcatt cacggcagga atccaccata caaccgacac cgaccaaatc
     3961 gccgatttgg aattttttgg cgtttttacc gactttgata atacgaccga tgatttcgtg
     4021 ccctggtaca agcggatagc tttgcgtcca gccccaatca ttgcgagcca tatgcaagtc
     4081 tgaatggcac acgccacagt acaaaatatc aatcaaaaca tcgtcttcaa gcaattcacg
     4141 gcgttcaaaa ctgtgtgggg caagtggtgt ggttgccgaa aaagtggcgt aggatttgat
     4201 agggtaagcc atttttgggg tttaaatggc tgaaatggca attactatag tgccgatgat
     4261 ttattattga aaatcaagat ttttgataaa tcggtatcag ttaaaatgat aattgggggt
     4321 tttcagactg actgaaaaat tattttgccc attttaaaaa caaaaacacc gccctcatca
     4381 caaaagcggt gtttttcatc aaaattgtgt caaagcatac tctgccaatt ctgtaagcac
     4441 ttcatcagca ggacgctgag tgggttttaa attgagtgcc aaatgtttca cgcctttttc
     4501 ttgttctttt gcccaaaagt ctgccaagcc ttttgcacca ccacgcagat aaatgttgtt
     4561 aaataactgt gctttggcgt ttttgtcgtc caaaacttcc acaaattgag catagccaaa
     4621 tgctgtgggg gtgtcttttt ggcgtaaatc ggcaagggtg ttgatgatgt ttgcggtgtc
     4681 ggcaggattc acaccgtgcc aaatccacgc atcaggtaca ttagcaagcc agtccatttc
     4741 ttgccttgct cgtccaatcg ccacaatggg caagcggtgt ttgggtttgg ggagcaaatc
     4801 caaattgtct gttaaatcgg cataatgttt gcctttgaaa tggggaaaat cctgctcggt
     4861 taaggtgtta atcaaatcaa tgctttcacg aaaacgctcg ctacgagagg caaaatccgc
     4921 cccaaatgca gggtattcca caggtctatc gccagaggat aagcccaata aaaaccgtcc
     4981 atgactcaaa ctatccacac ttgtcgccat tttggcaatg tgaatgggac tacgcaaagg
     5041 ggcaatcagc cctgccgtgc caagggcgat gttttgggtg tgggcggaca aaaaaccaag
     5101 tgtaaccatc gggtcaagcc cttgccccac atcgccaaaa tgagggtcat aaaacggcac
     5161 atctcgtacc cacaatgctg aaaagcccaa gttttcagcc agccgtgcat tgtcggcaat
     5221 ggtggtcaaa ttgtctggaa tgtgattttg atagcccata aagggggcaa ttaagcccag
     5281 tgttaattga ttttgcccaa aaacttggga gaaaatgggg gaaagcgtgt tcattttggc
     5341 gtacctgtct tatttaagat aaggtatttt aagggctttt gagtttgctt aaaatgggat
     5401 aaattgagaa agtgttttgc taaattggca taaatagacg ctttcaagct gactgaaaat
     5461 ttgcaaaatt tttaataaaa atgaccgctt gcctttcaac aagcggtcat tcccctttaa
     5521 ttttttacca ccgtaaacac cttatttttc agccgatatt cacttttttc atcgtgagcc
     5581 agttgcacaa tggttggctt gcgtttacac aattcacgca ttgcacacgc cgtcaatgtt
     5641 gccagcaagc atatcttgtt cagagtaaga ggcatcgccg ccaatcaaaa tataatgctc
     5701 gcccatatcc accaccaccg ccaaatgccc cagcgtatgt cctgcggttg gcacaaggcg
     5761 gattttgccg tctttggtga gtttatgact gctctcaaaa ctttcaaacg ccccatcatt
     5821 aaaatagatg ccatcaggct taaaccaatc aggatagtgc attgttaaat aaccgttcat
     5881 caccgcattg ggggcgttga ttgcctgttt ttcagtctca ctcatcacaa atcagctgtt
     5941 tgggaaattg ggcaatccgc ctgcgtggtc gccgtgcata tgggtcatta ccaccgtgtc
     6001 aatgcgtaaa gggtcaaagc cgtttgcctt taaaatttcg cccacttctt cgtgtttttt
     6061 gaccccacgc cgttcgcaaa actgcataaa cgggtgccac cacggctgat agcccttgtc
     6121 gttggcacga ctgctttcgc ccgtatccac caaaatcaaa ccgtcatcgt gttcaatcag
     6181 ccagcaacca atcggcagtt taggcgacca ttttttatcg gtcagcacat caagcacacg
     6241 ggcaggacgg gcaaaaaagc gtgccacttg atgatgaatt ttgatttgta cccaacctgt
     6301 tgtcagacaa tgcactttaa tcatttttgt gttctcatta aaaaatcgtg ggcatattgt
     6361 agaaagtgcg gtaacttttc acaaacatta aaaagttcgt atttggctgg atatgcagat
     6421 aaaattacaa aaatgtatgc ttattttgaa aaaagatgaa cgatttaaga gtaatcaaaa
     6481 cccatctagc aatccaaaac gctttgattg aattattaga tgaaaagctg tttgaaaaag
     6541 tgcaagtcca agaaatcatt gaaaaagcct tgattaaccg caccactttt taccgttatt
     6601 attcgggcga aagtgatttg gtcggcaaat tgataaaaga ggtgaaggcg gaatatcaag
     6661 acctgctcaa aaagcgtttt gaaagcggta atttgctgcg atttatgcaa accattggca
     6721 accgcttatt ggaaaaaaga cggctgattt tggcactttg gcaaatcaaa acccctcgcc
     6781 atcatttgta tgacgatatg cacatgctgt taaaaaacgc ctttatcgcc cacgccaaac
     6841 ggataacatc agatgataaa aactgggctg agaaaaattg ggattaccaa gcccatattt
     6901 ttgccaccat tgcccttgaa agccataaat attattttga acaaggcaaa cttttgccca
     6961 ttccacaggt gtttgaggag tggatagaaa tggtgcaggt gttgaaaagt gtttagaaat
     7021 aactggtaaa attttccata aaaaacaccg ctttcatcac aaaagcggtg ctttcaaatc
     7081 atcaaacctt aaccacaatc ttaccaatct gctgattgct tgccatatat tcgtgagctt
     7141 taaccatttc atcaaaggca aagattttgt caatttcagg gcgtaactga ccgcttgcca
     7201 aaccgtcata gacaaaggtt ttggcttgtg ccaatttttc aggtacggtg gtaatttcaa
     7261 agagttcata cccccgcacg gtcaaatgct tacccaaaat cgggaacact ggcacagcaa
     7321 tatcatcatg gcttaacgct ccataaatga tgtaacgacc atcttgtgcc attgcattga
     7381 tgatttttgc cgcctctttt ctgcccacag ggtcaaatac cacattgacg cctttgccat
     7441 tggtgatttc aaaaagtttg gcggttacat cgtcttcgct tgtggcaatc acaaaatccg
     7501 ctcctttttc caaaagtaca tcgcctttgg cgtgggtgcg agacaaggca atcacggttg
     7561 ccccttgcat tttggcgatt tggatactgg ctaaaccaac cgaactggtt gcaccgccca
     7621 gcaccacaaa atcgcctttt tgtactttgc caaactcaat cagtccgcca taagcggtaa
     7681 caaacgccat ccaactggcg gacgcttgtt ccattgacaa attatcaggg tgcttgacca
     7741 cagcgtgttt tggcatattg acgatttcgc cataagtgcc gtattcggta aacataaagg
     7801 acggaataat gctcacctta tcgctaatgg caacttcgtt cacaccctcg ccaatcgcca
     7861 caatcacacc agccccttca taacccaaag tcgcagggaa tacagggtca atcacatacg
     7921 ccccttcacg gtacatcatt tcggcacggt ttaagccaat ggcttggatt tggatttgta
     7981 cttcgtgtgc ttttggtgca ggaattgcta catcaacgat ttgcaagaca tcaggcgaac
     8041 ctgtttttgt aaattggatt tgtttgctca ttgttttgac cttttgtgta aataatgggc
     8101 gtattttaat gcaatgaatt tattttaaac acaacatcaa ttgcaaaaca cttttgctaa
     8161 atttacataa atacattttc acaatgtctg aaaagttgtt ttgcaaattt taaaaagaaa
     8221 accaccgctt gccgatcaca agcggtggtt tttgtgggtt attttgcaag aggtgtcagc
     8281 ttggctacag taagcggata aatgcgacgc cggctaagag taaggtaacg ccgatgatct
     8341 gcagcggtag aatgggtttt tgtgtaatgc cgaacagacc gaatttatct accagcaggc
     8401 tgccgcaaat caggccagag aggacgagca tcaccaccga gcctgtgccg atttggggga
     8461 cgagccaaac gccagcgagg ataaacaggc tgcccagtat gccgccgctc catatccaaa
     8521 acggtttgcc ttcggttggc tggcagagtt tcggcaggct tttttcataa aacagcacta
     8581 ccagtaataa gccgatggca ccgacaccga aggagactgt tgctgcgccg agtgatgagc
     8641 cgggctgtct gccgaattcg ccattaacgg cggcttgggt tgctaatgcg gttccgccta
     8701 atatgccgac tgcgcgccac agccataaat ttgcgttttc tttgcgtttt agaccggaca
     8761 gatggggcag taccacggca atccatacgc cgaataagac taaaccaatg ccaaacaggc
     8821 ggctggccgt gaaggctatg taaggcgagt taagccaagc gaaagtgtcg atcagcacgc
     8881 ccatcagcac ttggcctaaa atcggcatga ccgcagtttg tacgccgccg agcttgggga
     8941 agatcagtac gtttgccgtt agccccacca tgccgagtaa tccgcccgtc catgcccata
     9001 aggggacgtt gcctaaattg tcgaggctaa atgctggtgt ttgttgcatg atgagcgaga
     9061 gtccgagtag aaacaggagg cctacgctga aagagacaaa cgaggttaaa aatgccgcac
     9121 ccacgtgcat acgcaaacgg gcgttgatgg ctgattgaaa tgcaatcagc acgccggcta
     9181 aaataccgat aataaatgtc atgactaact gggttgtgct gccgcctcaa aatgagtggt
     9241 ggttgaaaag aaatgccgtc tgaatgcgga ttcagacggc cttaaggctt ggtatcggcg
     9301 tttacctgat gttgaatagc cgttttgcct agccggttta ttcgatgaat ttcaccacgg
     9361 tttcgaaatc tttacgtgct ttttggcgga tttctttatc acggtaaccg aaggtacaca
     9421 tcaccgatac gccccattcg cttgggtcaa ataatccttc cgctgccaaa atatcgttga
     9481 cttcttggta agcgaaacct tctatcggac aagaatctac gccaattaaa gctgcaccgg
     9541 tcatcatatt gcccaatgcg atgtaggttt gtttgcttgc ccagtcaaac aggctgcgtt
     9601 cgctgtctaa aatgccgata tctttctctt ggaatttttt atacacggcc atggcttttt
     9661 cgcgcgcttc gccttgtaaa cctcgtctat ccataatttc agaaaaatat tggctgtcgt
     9721 aacgggcatt tttcttcgct aaaatcacca cgatatggct tgaggtttcc atagttggaa
     9781 tgccccagca gtaaggtttg attttttgcc gtaattcagg gttttgcaac actaaaaact
     9841 gccaaggctc tgagcctacc gaacttggac ttaaacgacc gagttccaga atatagttga
     9901 aatcttcagc cggaattttt ctgctgccgt cgtaagaacg ggtagatgca cggtaatgaa
     9961 aggcattgat tacgtcttct ttgttgaaaa attgcatgga acactcctaa aaatgcaaaa
    10021 cagtcttttc agacggtctg aaaagtctag atgaaatacg gataagtata aaagatttaa
    10081 gttattttta ataattgata attttgatat ttaggtataa gttgacgtga tgagaaaaaa
    10141 cagaccctct gaatgttcag gcggtcttta acgttggttg tttacataaa taatccgcgt
    10201 tcatattgct tcggtacaaa ctgcatttca ctgctgtctg ctgcattttg gtcatattgc
    10261 gcattcaata cccagtacgg atcgcgcaat aaggctcttc ccacagccac taaatccgca
    10321 tcgcccatac ctaagatatg atcgcctacc gccggattat ccaacatacc tactgcaatt
    10381 accggtttgc ccgtagcgag cttcacttga cgggcaaagt ctacttggta acctgcgtaa
    10441 aattcggggt gattacctgc atgcaataca ccatcaccac caccgctgat gtctaagaca
    10501 tctgcgcctg catcggcaaa acgtttcgct acctgcaaac cataatccaa gccaaagccg
    10561 ttttcaccgt attcttgtgc agaaatgcgg acaattaacg gcatttcaga cggcatcact
    10621 tcacgtgctg cctgaatcac ttgctcgcca aacaacattt tgtcttggcc gtactcatca
    10681 ctgcgctgat tggatttcgg cgaatagaat tggtgaatta gataaccgtg tgcgccgtgg
    10741 atttcaattg tatcaaagcc tgcctcaacg gcacgtttga ccgaatcctt aaaggcttga
    10801 accaatgctt tgacttcgtc tgtcgtcagc tcgcgaggtg taatcagatt ttgtccggca
    10861 taatccaact caccgtagtg aattgcactt ggagccactg catccggctc gtcttgggct
    10921 ttgcgtccgg catgggcgat ttgcacaccg atttttgccc cttgagcatg aacgctgtct
    10981 accagttttt tgaatgcctg ttgttgttca tcgttccata agcctaagca gtttggcgta
    11041 attctgccgt ttggcgccac attggtcatc tccacaataa tcaagccgac accacctact
    11101 gcacggctgg tgtaatgcac gaaatgccaa tcgttcggta cgccgttggt tgccgaatat
    11161 tgacacattg gtggcataac cacacggttt ttcaatgcta agtttttaat gttaaacggg
    11221 gtgaataatt ttctgaactt cgccatgttg ccttccttaa tgaaatagat taggtggaat
    11281 gataattcag tgctattatc tattcaaatt gattattgtg atagttaggt ataaaaatga
    11341 gtgatataag aacactggat ttcaatttgc tcaaagcttt tgtggtgctg ctggacgaat
    11401 gcaacgttag ccgggcagca caacgattat ccatcaccca accggcaatg agcggtattt
    11461 taaaccgctt gcgcgagagt tttaacgatc cgttatttgt gcgagtgcaa cacggtatgc
    11521 agccaaccga ccgcgcgttg caactggggc aaaccgcacg caacattctg caagatatca
    11581 gctccatgct gcaaccaccc atattggaac cggaacatct gaatatgacc ttgcgtattg
    11641 ccgcaatgga ttatgtacaa caaattattg ccttgccgct gattctgcgt ttaagacggc
    11701 ttgctccgaa tgtaaaagtc gccttactgc cggtgcaggg gcaaaatatc aaaactttgt
    11761 tcgagcaaaa aaaaatcgat cttgccttgg tcagccgcca acatttaagc acggatacgc
    11821 tgaaaacggt attatatgaa gaacgctacg tatgcgcgat gagcaaaaca cacccgatgg
    11881 cgcaaacacc gctatcgctc gatcaattct gcaatcttcc cttcgcaatg ctttcttaca
    11941 acggcggaga attcagcgga gctacggatc tagcgttaca aaagatagga ctacagcgca
    12001 aagtaatggt ctcggtaaac catatttccc tgctgcccca gctgctacaa ggttccgact
    12061 tagtcgcagt attgcccgaa cgcttagcaa aaaccttacc caatgtttat ttacaacctc
    12121 cgcctataga ggtagaaggc ttcaccatga tgatggcttg gcacgaaaga accgaacaag
    12181 atacggcgca tcgatggtta agagaggtgc tgcagggtgt ggtaaaacct aaacaggctc
    12241 tttaattatt ctttcttttg ctatgaaaaa agccgtttat atttttagat aaacggcttt
    12301 tttgcattct aatattagta tttttctaca aactgagcat aggcattaat gaagttttgc
    12361 attgagcttt ttaatgtctc agaggcaatt tcaccctgtt catcaaatac gcctgtaaat
    12421 aagtttccta cgtttaatgc gaaaggtaag gttggcatat ttacaaatga gcctgaagta
    12481 atagtacgta cttgatcagc tgcacgtaca ccgcctgccg ggcttgcgcc aacggttacg
    12541 atacctgccg gtttgccaat ccatttgctt tgccccattg ggcgagaaac cacgtcaatc
    12601 gcatttttaa gcattgcaga aaagcttgca ttatgctcag gtgtgactaa taacacgcca
    12661 tctgccacag caaccgcttc acgcactctg gtgtattgtg ccgggctgtt ttcatctaaa
    12721 tcacggtcgt aaagtggtaa gtctgcaata tccacaatgt ttaattgaat gcttgcaggt
    12781 gccatttttt gtaagtgacg aacagtcaag tgactaaatg aagttttgct gccgctacca
    12841 attaatactg caatttgttt tgccatttta taattcctta gtacatagag aatataggca
    12901 ttttatccct ttcaatctgt ttcataaagc gcttatgatg aaaagcacta tttacttata
    12961 ttaaataatt ttgcaaattt taggccaaat ttgaccgctt ttatctttag ctaaaaaggt
    13021 tataatttgt agaaatagat cttaatttag ggtttttatg ctttttctaa acaaaataaa
    13081 acagcttttc atcttcgcct ttacgctagt gttatctgct tgcagtttgg ttgtttataa
    13141 gccagttgaa acaattaaac aggtaaatgt tgaaagaggt tatcgacaaa aaaatgtgat
    13201 cgctgaaagt gcaaaagacg gtaatattgt tgtcatcatg ttttcaggtg gtggaacaag
    13261 agcggcggcg cttggttatg gagtgttgga agagtttaaa aaggtaaggg tgaaagaaac
    13321 aaataaaggt aatactttat tagagaatat agatattgcc tttggcgtat caggtggatc
    13381 gatattagcc acttattttg cgttggaagg aaaggatatc attcctaaat ttgctgaccg
    13441 ttttttaaaa gcgaactttc aaaaagatat tattacagag gtgttttcgt tatccaatct
    13501 tcctcgttta agttctcctc aatatgggcg tggtgattta ttgcaagaac gcttaaattt
    13561 tgccctttat catggtaaaa agtttggtga tttagtgaaa aatcgtaaag gaccttttgc
    13621 tgtgattagc gcaacagaca tgaacattgg tcaaaaactg acctttacgc aagaaacctt
    13681 tgatgggctt tgtttaaatt tgaatgattt agaaatttcc cgtgctgttg ctgcttctag
    13741 ttctgttcct ctgatttttg cgccgcttac actgaataac aatggtggaa attgccattt
    13801 tagtatgcca caagaattta gtgctagaga aaaagcaatt gatggactaa ttacaaaaaa
    13861 tattgaagaa acgaatcata tactcagcct ttatcaagat agtaaagaac gcccctttat
    13921 ccatttagtt gatggtggat taacagataa tttagggctt gccagtgtgc tggaaatatc
    13981 tgatgttatg ggtattgaag agatgtacca gtatattcat cagcttaggg tgaaaaatat
    14041 tgtagtgatt aatgtaaatg cgcaaaatga agtatctagc gagatcgata agaccgcaaa
    14101 tgtaccgggg gtggctgatg tagtgaatac aatagttaat gtgccaattg atagaacgac
    14161 acaaattaat ttacaacgtt atcgccagtt tacagatggt tggaatgaat atgcaaataa
    14221 acagccatca aagatcgaaa tgcattttgt cagtttaggt ttaaaagaat tacctgatgg
    14281 tgatttaaaa aaagatgtgc taaatattgc aacatcattt tatttgccgg aagaggatgt
    14341 agataaatta cgtgaagctg ctcgggtttt attgcagcaa tctcaagaat ataatgcggc
    14401 attaaaaaca ctgcagtagt aaaaaaccga ccaagcggtc ggtttttggt atttttttgc
    14461 aaatatttat tcgctgatgt cgtttaaatc caacaactct tgcgaaagaa taatgccggt
    14521 taagtcagca taaacgtaat cttcggggaa gaaggttaca ccgccaaaat tcacaggcgt
    14581 atccacttcg ccaatgtcgg tattatctgc tcccactgga attggcgcta aagcatgaat
    14641 accgatatct aatctttcca aaatatctaa ttggcgaacc gcaccataaa cgatgatacc
    14701 ttcccagccg ttatctacag caagttgagc cagctctgcg tcaattaagg cacgacgaac
    14761 cgcaccgcca ccatcgacta acagcactcg cccttcaccc tcttcttcca aaacttcagc
    14821 aattaaaccg ttgctttcaa agcatttaac cgtggtaatc ttcccaaaga aggaagaagc
    14881 accgccaaag cttgagaaaa ttggttcaac cacatcaact tggtcagaat aaagatcgca
    14941 aagtgcagag gtatcaatac gcataatatg ctcctgttcg tagattattt agctaaagta
    15001 taaaccttcg cccaaaattt gcaaaatttt atcgaaaaaa gaccgcttac aggctttttt
    15061 cttatgcttt attttctagt gaaccgcttt taatatgcaa ttccatttgg ttgtaaggaa
    15121 tagatatacc tgcttcacca aaggctaatt ttacttgttc gataatttcc caatatgctg
    15181 cccagtaatt tggtgtctga acccaagggc gaacaacaag ttgaacacta tgcggtgcta
    15241 aagcgccgac tgctactaca ggtgccggat cttttaatac ataagtattg gcgtctaaaa
    15301 tgcgttggat aatctctttc gcctctttta agttagattc ataagaaata tcaaaggtga
    15361 aatcaatacg gcgtgtcggg ttgttagagt agttgatgat gctgtcagaa aacactttgc
    15421 cgtttggtaa taacacggtt ttgttatcgc cggtgcgaag ttccaacact aaaagcccca
    15481 tttgttcaac cacgccggtc attccgccgg tttcgattaa atcccctttg cgaaatggct
    15541 tgaagattaa caacatcacg ccggcagcaa agttttgtaa tgagttttgt aatgataaac
    15601 cgatggctaa accggcagca ccgattaatg cgaccagcga gctggtgtta atgccgattt
    15661 gtgaaagcga ggcaatcacc acaattaaca gcagtaaaaa atagctgatt gagacaataa
    15721 aactttgcag catttcatct ttggttgatt ttaatgcggc tttaccgagt aaacggctaa
    15781 ttaggcgggc aagaaatttc ccgactacaa aaatcgcaat cgccagtaaa attttggtgc
    15841 cataagggat aatccactca tttagcatag tttcaatatt catattactg actttgtgga
    15901 ttactttttc ggtttcggca accacgtcaa tgtttggagc tgtttcggtg actttttcag
    15961 tcatattgtt tccttaaaat taaaatgaaa aataagccta gcgaatttgc ctcactcgct
    16021 aagcggtttt gtgctagaat ttagagcaaa attttctcta aaagacaaga taatgacaac
    16081 agaaaaagta attagtgccg gcgttcaatt ttttacgatc agtgaagatg aagccggaca
    16141 gcgtttagat aattttttat tggcaaagct caaaggcgtg ccgaaaagtt tgatttaccg
    16201 cattgtgcga aaaggcgagg tgcgggtgaa taaaggacga aacaaacccg aatataaatt
    16261 acagcctgat gatttagtgc gtgtgccgcc ggtgcgtgtg gcggaaaaaa atgaagcccc
    16321 aatttcgact aaattaaaca aagtggcgga gctggagagc caaattctgt atgaagatga
    16381 gtcaatgcta gtaattaaca aaccttcagg cattgcagta cacggtggca gtggtttaag
    16441 ttttggtgtg atcgaagcct tgcgtgcatt acgtccacag gctcgtttct tggaattggt
    16501 acaccgtata gaccgtgata catcaggcat tttgctggtg gcgaaaaagc gttcggcgtt
    16561 acgttccttg cacgaacaac tgcgtgaaaa agtagtacaa aaagactatc ttgcccttgt
    16621 gcgagggcaa tggcaggctc ataccaaagt gattaaagct ccattgctaa aaaacgaact
    16681 tgccagcggt gagcgaattg tacgggtgag tgaagagggt aaaccgtccg aaacccgttt
    16741 cagcattgaa gagcgttatg ccaatgccac tttggtgaaa gcttcgccta ttaccggaag
    16801 aacccaccaa atccgtgtgc atacccaata tgccggacac ccgattgcgt tagatgacaa
    16861 atatggtgat gcggaatttg acagcaaaat gaaagaagtg ggcttacagc gtttatttct
    16921 gcacgcccat gctattcgtt ttgaacaccc caaaaccggc gaagaaatgg tcattaccgc
    16981 cccgctggat aaaactttaa aaggcgtatt ggcaaaatta agggctaatt actaaataac
    17041 ttaatgagag agtaagatag cgcaagcgtc cacgcttgtg ctgtaaatca acatagagtg
    17101 gtacaagcgt ggacgcttgc accaacaaaa tataagcaaa aatatgcaaa tccatttcaa
    17161 aaattttcaa aaaaatgacc gcttgttaga tttaaccaca ccgcaaatta tggggatctt
    17221 aaacttcacg ccggattcat tttccgattc gggcaagttt ttttccctcg ataaagcctt
    17281 gttccaagcg gaaaaaatgt tagctgatgg ggcaagcatt attgatattg gcggtgaatc
    17341 cacccgccct aatgcggcga ttgtgagctt agaacaagaa ttagagcgtg ttgtgccggt
    17401 ggtggaggcg atccgcagcc gttttgattg cttgatttcg gttgatagct ccaaagcaga
    17461 agtattcaaa gagtcggcaa aagtcggtat ggatatcatt aacgatattc gagccttaac
    17521 cgagccgaat gcgttggcag cggcagtaga attgggcttg ccggtttgtt taatgcatat
    17581 gcaaggcaac ccgcaaacaa tgcaacaaaa tccgcactat gatgatgtgt tggaagatgt
    17641 ggcagatttc ttaaatcaac ggattttcga gtggcatcac cgcaggcatt cccaaagaac
    17701 acattatttt agaccccggt tttggctttg gtaaaagcgt gaaacacaat taccaattat
    17761 tgaaacacct taaagccttt gtggattcag gcttccctgt gcttgccgga ctttcccgta
    17821 aatcaatgat tggtgcggtg ttagataaac cggtagaaca acggctactt ggctctgtag
    17881 taggggcgtt attagccgct caaaatgggg cgaaaatttt acgggtgcac gatgtggcag
    17941 aaaccgccga tgcgttaaaa atctggcagg caatgctgga atcagataat gaggaaaaat
    18001 gatgacaacc ttagtttatg gcattaaaaa ttgcgacaca gtaaaaaaag ccttgaaatg
    18061 gctcgaagat cataatcaaa acccacaact gcacgattac cgtgtggacg gtttaaatgc
    18121 cgattggtta gtggaaatgg aagcaaaatt cggttgggaa aacttagtta ataaacgtag
    18181 caccacttgg cgaaaccttg atgaggaaat taaaaacaac cttaaccgtg agtcggcatt
    18241 aaaagtgcta accgaacagc cgaccctaat taaacgcccg attgtgatta aagaggatat
    18301 tgctttgatt ggttttaatg agaaagagta tgtggctgcg tttaattaat tttttcccct
    18361 gcttgtaggg acaggtcctg tgcctgtccg tagtctttag gattgttcgg gcgggcacag
    18421 gacccgcccc tacaggatat atagcaaaaa attcacccaa aacaaccgct tgtaacctat
    18481 gaaaaatgaa attatttccc ttgcacagaa cctaatccgc cgtgattcca tcagcccaca
    18541 agacaaaggc tgtcagcaag aaattgcaca acgtcttgaa aaactgggct ttaatattga
    18601 atggttgccg tttggcgaca ccttgaattt atgggcaacg cacggctcgg aaaatggtaa
    18661 aacagagcct tgcattgtgt ttgccgggca tacagatgtg gtgccggtag gcgatgaaag
    18721 ccaatgggct tatccgccgt tttcggctga gattgtagat ggaatgcttt atgggcgagg
    18781 ggcggcagat atgaaaggct cgctctcggc gttagttgtg gcggcagaaa ctttcgtgca
    18841 acatcaccca aaccataagg gcaaagtggc attattgatt acctccgatg aagaggcagc
    18901 agccaaagac ggtacggtaa aagtggttga aaccttaatg gctcgcaatg aagcggtaca
    18961 ttatgcggta gtgggcgaac cgtctagtag caaggtgttt ggcgatgtga ttaaaaacgg
    19021 cagacgtggt tcaattacgg cagatctcta tatcgagggc attcaagggc acgttgccta
    19081 tccacatttg gcggaaaatc cggtgcatac gtcactgggt tttttaaccg agctgaccac
    19141 ttatcagtgg gataacggta acgaattttt cccgcctacc agtttgcaaa ttgccaatat
    19201 caaagccggc acaggcagta ataatgtgat tccgggcgag ctttatgtgc agtttaactt
    19261 acgttattgc actgaagtga ccgatgaaat catcaaagcc aaagtagcgg aaatgctcga
    19321 aaaacacggt ttgaaatacc gaataagttg gaatttatca ggcaaaccat tccttgccgg
    19381 caatggaaaa ttggtcgaag ccgccttaca agcggtcgaa aatgtcacaa aaattacgcc
    19441 tcgtttagac acaggtggcg gtacttcgga cggtcgtttt attgcattaa tgggggcaga
    19501 ggtagtggaa tttggaccac tgaacgccac tattcacaaa gtgaatgagt gtgtgagtgc
    19561 ggatgatttg gcacattgtg gcgaaattta ttatcaaatt ttagaaaaat tattggcaac
    19621 tgcataaccc taaataggca gaatgttatc aaattgtatt ctgcctattt tttatgtagc
    19681 tattctgtta aacagcgttt acactagcgg cagtttttat atttataggt aaatgttatg
    19741 caactctact cttatatctg cttgctgttt gggcttgcga tgtttatttc gttttttacc
    19801 cgaaaattaa acgaaaatat tcaaaccact attgcaatta cagcctctgc ccttgtcggc
    19861 tcccttctta ttcttacctt cggttctctc ggctggttta atgttgataa acttgccatt
    19921 tccatttttg aacaactcga ttttaaaagc ttcctgttaa acggaatgct ggggttcttg
    19981 ctttttgccg gttcacttgg gattaaacta ccattaatga aagagcaacg gcgggaaatt
    20041 gcagtttatg ccttattttc aaccttagtt tctactttct tgatcggtgc gttaatttat
    20101 ggcgtggcaa ggctacttgg gttagagctc ggctttgtgt attgtttgct gtttggctca
    20161 ctgatttcgc caaccgaccc gattgccgta ttggcaatta tcaaaagcct gaaagcccca
    20221 aaacgccttt cgatgcacgt ggagggcgaa tctctgttta atgacggtat cggcttggtg
    20281 atttttacca ctatctttgc cgttgctttt ggcggacaag aaccaaacct tagcggtatt
    20341 accggactgt tcttgcaaga agcggtaggc ggtatcgttt ttggcttatt aaccggtttt
    20401 gtggcacata aatttatttc cgcaaccgat gacggaagcc ttgaaatttt aattacgcta
    20461 acgattccaa cagtcggctt tgtgattgca aactacctac acgtttcagg ggcattaaca
    20521 atggtagttg ccggtattat gattggcaac tggactcgcc gttccggttt ctccgaacag
    20581 agccaaaaat atcttgatca cttctgggag atgatcgacc attcattaaa ctacctgtta
    20641 ttcctgctta tcggcttaag tacactgtta gttgatttca cctttattgg tggggtgtta
    20701 atgttggcag caattccaat ttgtttgctt gcacgctata tcagcctgtg gattccatac
    20761 caagtgttaa aacgtttccg tacttataac ccgtacacct taaaaattat gacttggggc
    20821 ggtttacgtg gtggattagc ccttgcgatg gcactttccg taccggcagg ggctgcggtg
    20881 gtatcgagct cagaaggcaa tcttgatgta cgtgatttga ttttgttaat gacttatgcg
    20941 gtagtcactt tctcgatttt agtacaaggt tcaacggttg aaccgatgat aaaaaaatcc
    21001 aagttggtag atccaagaaa agtggcactc aataaattag gtgcacctga tgatgtaatt
    21061 ccacatattt aatagcattt ataactgaat aacatatcat tttgctaaag attattagcc
    21121 atctagacgg ctttatattt aaatacctct cacgttaatt tgttgagagg tattttttat
    21181 gttattcaca ggattattat gtggctttct actcgggttt gtgatgcaaa gagggcgttt
    21241 ttgtattacc ggagcatttc gtgatctcta tgtaacaaag aatagccgta tgtttgtggc
    21301 acttttaatt gcaattacgg tgcaatcgat cgggatttgg cttttgtatg aagccggctc
    21361 ttttagttct ccggcggaag atttgccttt gctcgcagtg atcattgggg catttctgtt
    21421 tggtatcggc attatttatg caggcggttg tgctacagga acgtggtatc gtgccggtga
    21481 gggtttaatc ggcagttggg ttgcactggt tatttatggg ctgttttctg cttctatgcg
    21541 aaccggtgtg ttagccccac ttaatcaaga gctaaaaagc aatgtaattc aacaccgcac
    21601 gatttatgaa acatttggta tttccccttg ggtgttagtg tttatcctga gtgtaattac
    21661 attggcatta tccgcccaca gcatttaaaa ggttaatttt ttaaggagta ataaagatga
    21721 acgtacgttt acctgcctca gggcttgttt gcccgtttcc attagtcgaa gccaaagcgg
    21781 cgatggcaaa attgaataaa ggcgatagct taacgattga atttgactgt actcaagcaa
    21841 ccgaagccat tccaaattgg gcggaagagg aaggctatga agttaccgat taccaacaac
    21901 ttggtgatgc cttgtgggaa attacggtgg ttaagtaatt agcaataaaa aagctctact
    21961 tttttgtaga gcttttgctt tgagttttgt atttactaag gattagagta aacccggttg
    22021 acctaatgct gggtctgttg ctcttgcagc aatagcatct tcaaccgtca tacctaatgc
    22081 ttttgccaca ccttcaccat atgccggatc acaggcatag cagttacgaa tatgacggta
    22141 tttaatgaag tctaatgcat cgcccatacc tgcagcagta ttattgaata atgcttgttt
    22201 ttgttcatca ttcatcatat tgaacaatac acgtggttgg ctgaagtagt cagcatcgtc
    22261 ttcacgatag ttccagtggg ctgcatcacc attaattttc agtggtggct ctgcatattg
    22321 agcttgttct tgccatttgc cgaagctgtt tggttcgtag tgaatggtac taccgtagtt
    22381 accgtccaca cgaccttgac cgtcacgagc gttgctatga accgggcaac gtggagcgtt
    22441 tacagggatt tggtggtggt tcacacctaa acggtagcgt tgagcatccg catagttgaa
    22501 taaacgagct tgtaacatac ggtctggaga cacgctgatg cccggcacta agttacttgg
    22561 tgcgaatgca gattgttcca catcagcaaa gaagttttca gggttacgat ttaattcaaa
    22621 ctcacccact tcaattaacg gatagtctga tttcggccat accttagtta aatcgaacgg
    22681 gtggtatggt actttgtctg catcagtttc aggcataatt tgaacaaaca ttttccattt
    22741 cgggaaatcg ccacgctcaa tcgcttcgta taaatcacgt tggtgacttt cacgatcgtt
    22801 agcgataata gcggctgctt cttcgttagt taagttttta atgccttgtt gtgtatggaa
    22861 atggaatttc acccagaaac gctcattagc tgcattgatg aagctataag tatgtgagcc
    22921 ataaccgtgc atatgacgat atgaagccgg aataccacgt tcactcatta caatagtcac
    22981 ttggtgaaat gcttctggta ataatgtcca gaaatcccag ttgttagttg cagaacgcat
    23041 attcgtgcgt gggtcacgtt taaccgcttt gtttaaatcc gggaatttac gtgggtcacg
    23101 taagaagaac acaggggtgt tgttacccac catatcccag ttaccttctt cggtatagaa
    23161 ttttaatgcg aaaccacgaa tatcacgctc agcatctgcc gcaccacgtt cacctgcaac
    23221 ggtggtgaaa cgagcaaaca tttcagtttt tttaccgact tggctaaaaa ttgccgcacg
    23281 agtgtattta gtgatgtcgt tagttacagt gaaagtaccg aacgcaccgg aacctttagc
    23341 gtgcatacga cgctcaggaa tgacttcacg cacgaagttc gctaattttt catttaacca
    23401 taaatcttgc gctaataatg gaccacgtgg acccgctgtt aagctgtttt ggttatcaac
    23461 aacaggtgca ccgttgttca ttgtcaaatg tgtaacagga catttagaca taatagaatc
    23521 ctcataaatt agaaataaga taggtaatta at
//
LOCUS       DANMCL010000036        23545 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.036, whole genome shotgun sequence.
ACCESSION   DANMCL010000036 DANMCL010000000
VERSION     DANMCL010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23545
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.036"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            124..939
                     /locus_tag="PXF40_001261"
     CDS             124..939
                     /locus_tag="PXF40_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HDL5802602.1"
                     /translation="MTLPFRAIISDLDGTLLNANHKIGDFTIDTLEQLSKKGVDIFFA
                     TGRNHPDVSQIIGKVNVKNAMLVTSNGARANNLEGKKILNHYLPEDLAFELMNIEFDD
                     QNVCLNSYQGDEWFINKEIAELKKFHQDSGFSYQVVNFAHHHGRNTEKVFFIGKTAEA
                     LVPIEHYIRDTYGDRVQMTYSALLCLEVMAKGVCKANALAELVKLRGYTLADCIAFGD
                     GMNDVEMLSLAGKGCLMGNADPRLKAVLPNNEVIGFNKDEAVASYLRATFGIV"
     gene            1005..2168
                     /locus_tag="PXF40_001262"
     CDS             1005..2168
                     /locus_tag="PXF40_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HDL5802603.1"
                     /translation="MKRKTLATLVLIAALGIGGYFYYQQQTNKPQIHYITQAVTRAEI
                     NKNVLATGSVRANKRTEVGAQVSGKIQKLYVELGQSVKQGDLIADIDSSNQSNTLSTA
                     QARLSSYKAQLTSAQVALEVAQSNYNRLNKLYRANSASLNDLETAKNTLASAKATVDN
                     IKAQLKSAEISVNDAKTNLTYTQIISPMDGVIVSVPVSVGQTVNSNQTSPTIVQVADL
                     SKMLIKLEISEGDIAQVKVGQKVKFSTLAEPNREYSATIDSVDPALTTLTDNNYTEQS
                     GNTEAVYYYANVSVDNADNSLRIGMTTQAQITIDKREQVLVVPTSVIKKRGKENYVLV
                     LENEQSVERKIQIGISDTQNTEVLAGLNEGDQVIVTQRADDEKISTARGPRMF"
     gene            complement(2281..3224)
                     /locus_tag="PXF40_001263"
                     /pseudo
     CDS             complement(2281..3224)
                     /locus_tag="PXF40_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251085.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            3372..4193
                     /locus_tag="PXF40_001264"
     CDS             3372..4193
                     /locus_tag="PXF40_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase, lipoprotein e(P4) family"
                     /protein_id="HDL5802604.1"
                     /translation="MKNIKLSAMSLTALFVLTACSHTHKNSDEHHQMVLQEQATLGIN
                     WMQQSGEYQALAHQAFNAAKVAFDQAKVKKGKKKAVVVDLDETMVDNSLYAGWQVKNH
                     KPFDGESWTRWVNARQTGAIAGAVEFNNYVNSHKGTMFYVSNRKDSSEKAGTIDDMNK
                     LGFSGVSEQTLLLKKDKSNKTPRFEEIEKQGYEIVLYIGDNLNDFGDATYRKSNAERR
                     AFVAENSQQFGKKFIMLPNPNYGDWEGGLDKDYYKGNAESRVKIRHNAIKAWDGK"
     gene            4332..5612
                     /gene="pepB"
                     /locus_tag="PXF40_001265"
     CDS             4332..5612
                     /gene="pepB"
                     /locus_tag="PXF40_001265"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HDL5802605.1"
                     /translation="MTAMKISLSTQNAPEIWGKNAILSANDAGFTVHNPNNDLATIQK
                     AARKIKNQGISTVELTGDSWDLESCWAFHQGFHSVKNQGSVQYPDLDEQQAEFDNRVK
                     CATFVRELINKPSDKLTPEKLAEQAVEFIQKMAKPNTVSYQIIRGEALQEQGYHGIWT
                     VGKGSANPPAFLVLDFNPTNDENAQVLACLVGKGITFDTGGYSLKPSDSMSTMRTDMG
                     GAALLTGSLAFAIARGLNKRVKLYLCCAENMVSHNAFKLGDIITYRNGVTVEVLNTDA
                     EGRLVLADGLIDACKQNPQFIIDAATLTGAAKVAVGNDYHSVLSMDDNLTEALFKSAK
                     TENEPFWRLPFEEFHRGQIASSFADIANIGSVPVGAGASTATAFLSYFVENYQQNWLH
                     IDASATFRKTASDLWAAGATGLGIRTVANLLLSK"
     gene            5663..6145
                     /gene="greB"
                     /locus_tag="PXF40_001266"
     CDS             5663..6145
                     /gene="greB"
                     /locus_tag="PXF40_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HDL5802606.1"
                     /translation="MAKSNYITRSGWQALDQELKFLWREERPKVTQAVSDAAALGDRS
                     ENAEYIYGKRRLREIDRRVRFLSKRLEVLQIVDYHPKQEGKVFFGAWVELENEEGEAK
                     QYRIVGCDEFDPAKNWISIDSPVARALIGKQVDDEIRVETPLGKVLLYINKIWYEQAS
                     "
     gene            complement(6187..9711)
                     /gene="recB"
                     /locus_tag="PXF40_001267"
     CDS             complement(6187..9711)
                     /gene="recB"
                     /locus_tag="PXF40_001267"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HDL5802607.1"
                     /translation="MKNLNPIQLPLNKSVLIEASAGTGKTFTIANLYLRLLLGIGCNP
                     LTVEQILVVTFTKAATEELKNRIRKNIQQCADFLKDQADGLEVESTKSYRNNLDFLAQ
                     IYPLIPNIHEALLRLSIAEREIDTASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQS
                     DLLKKLSEEVWREQFYPQDLAITYAVAEQLGTPEYALNAVRRYLSTELPEPNASLNQD
                     IAEHLAQYQQFINEVKSYWKTHSDELVETIRHDLKHKITLHGGWYRATTFEAGVEVMN
                     QWANSQHNHFPAGLYLFTTEKIAAGTKKSCEPIDSPHLAKNQAFLTAYKERFENSLSA
                     MLQYQFLIALKAKLAEYKQSHPQRSFDDLLTMLNQALKNLHTGEALSQKIRAMYPFAM
                     IDEFQDTDLTQYEIFSQIFMAENAENGFIMIGDPKQSIYKFRGADIFTYLRAAKQADE
                     QFTLGKNWRSLPEVVQAVNNLFSFANDNSPFLYEDIGFHPVEADSQKGQLVSEQGHFV
                     GYITENSKLDDLAEMCAYQIHQQLEAMAQGKFGVEKNGEFQSFAAKDIAILVRKGSQA
                     KRIKKALAKRNIKSVYLAESASVFGSEIATELCWLLQAALNPYHYKALLSALGSTLWG
                     LTAAEIHRYKENEQLWDLKVNQFVEYSNIWKEQGVLPMLHKIYLEQGIIERLKGLENA
                     DRLITDLLHLTEILQETSQALESEAELLRWYEKQVNSPDFNDEQQLRLESEEELIKIV
                     TIHGSKGLQYPIVWLPFVSQKSEGDTQTALSLYRNSQGALDWCLGSEEASFSLQYEAY
                     AEDLRLLYVALTRAESQLNLVLPKEISGWSPLHYLLADGEIPTGKVPVSDYFSQKRIA
                     ANLVEVAGELPFSLWEGEQSSDDYQAKTFSGNIRVVGQITSFTSLYAQHERFSEGKSE
                     RVMDLAQDRDVHIETIEAGYSSETAAFSPFQFPHGIKVGTVLHHFFEHCQFNEQIDRE
                     AVAKVCEQLGLSEEWIEPTALWFERILTTPLAEANFCLKAIDETKRLNEWQFYLRLKN
                     DKALHQLNALLKQHSPLAKTLPELQLPQLEGFVRGFVDCIVQVEEKFYLIDYKSNFLG
                     YLPQNYAKEHIQREMGRQRYDLQYLLYTLALHRYLTARLGEKYDYERDFGGVAYLFLR
                     AMNGENDNGVYFDKPTKQLIEEMDRLFG"
     gene            complement(9770..11161)
                     /locus_tag="PXF40_001268"
     CDS             complement(9770..11161)
                     /locus_tag="PXF40_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HDL5802608.1"
                     /translation="MNLRWQEYPENARKLFKLSLPIFISQLSASGMGLADIVMAGLVS
                     DDDVSAIAVSNSIYFPLFLFVSGLLNAITPTVSYLNGSSNRHLIANQVRQGYWIVFAM
                     SIPLMAIFLNSHLILDLMQTPAEFSIKSQQYLAVMAVGLIPALLAVSLRCMNDGLSNP
                     KPAMRITFFGLLLNIPLNYIFIFGKFGLPEMGAVGCGVATAIVNLIMFFMLLHYCYTN
                     SAQKDIRLFEKWIDAPSGQILLKLCKLGLPIAFAIFTEVMLFSTSSLFLSPLGSQVVA
                     SHQAALQTSSLFFMIPMSFGIATTIMIGQTLGQKNVEGAKILSYHALITATALAIIAA
                     IIIILLKNFIPFAFTNNPISIAITAHLLIFAAVYQIPDAIQAVANGILRGYKHTQPIL
                     YVTLFCYWGVSMPLGYILARTDWIVQPMAAQGFWLVFCIGLSLAGGLLLWQMRKIQAV
                     PKAQLIAKLERIK"
     gene            complement(11297..12391)
                     /locus_tag="PXF40_001269"
     CDS             complement(11297..12391)
                     /locus_tag="PXF40_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HDL5802609.1"
                     /translation="MKKLAGLFAAGLATVALTACNEEKAAEPKATAAEAKPQATNQTV
                     HLYTWTEYVPEGLLDEFTKETGIKVEVSSLESNETMYAKLKLQGKDGGYDVIAPSNYF
                     VSKMAKEGMLAELDHAQLPVIKELNQDWLNKPYDQGNKYSLPQLLGAPGIAFNTADYK
                     GETFTSWGDLWKPEFAGKVQLLDDAREVFNIALLKLGKNPNTTNPDEIKEAFEELKKL
                     RPNVLSFTSDNPANSFIAGEVSVGQLWNGSVRIAKKENAPVDMVFPKEGPVLWVDTLA
                     IPANAKNKENAHKLINYLLSAKVAEKLTLAIGYPTSNVEALKVLPKEITEDTAIYPSA
                     EVLQKSQWQDDVGDAIELYEKYYQELKAAK"
     gene            12613..13209
                     /gene="grpE"
                     /locus_tag="PXF40_001270"
     CDS             12613..13209
                     /gene="grpE"
                     /locus_tag="PXF40_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HDL5802610.1"
                     /translation="MTTQNEHLQEEVKQEEIQPEVVTEETQAEEQNTPQEEPLALAQA
                     RIAELEAYIAEADKREQDIQLRAQAEIQNIRRRAEQDVEKAHKFALEKFSKELLTVVD
                     NLERGLDALDKAVTDETTQALVDGVEMTHKEFINTLAKFGVVAIGEVGEAFNPELHEA
                     ISMQPAEGIEANHVSTVLQKGYTLHGRVIRPAMVMVAN"
     gene            13307..13576
                     /locus_tag="PXF40_001271"
     CDS             13307..13576
                     /locus_tag="PXF40_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802611.1"
                     /translation="MDAAMSLRFDKLRFVKRLQEANQTPEMAEAFANALDEALEQSQS
                     PLATKADLQLELEKLKNEINTTIFKAITLNITILGFLMAIMKFIN"
     gene            13639..14091
                     /locus_tag="PXF40_001272"
     CDS             13639..14091
                     /locus_tag="PXF40_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HDL5802612.1"
                     /translation="MTLQFNAVALLLVVLIILGLISQNSAVTISAAVLLIMQQTLLSK
                     FIPFVDQYGLKIGIIILTIGVLSPLVSGRITLPELAQLLNWKMALSIIAGVLVAWLGG
                     RGVNLMGSQPVLVTGLLIGTVIGVAFLKGVPVGPLIAAGILSLIVGKT"
     gene            14195..18181
                     /gene="hrpA"
                     /locus_tag="PXF40_001273"
     CDS             14195..18181
                     /gene="hrpA"
                     /locus_tag="PXF40_001273"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HDL5802613.1"
                     /translation="METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHK
                     RSVLAEISQDLTACQARFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAG
                     ETGSGKTTQLPKMCLELGRGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKV
                     RFNDQVSENSLIKLMTDGILLAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQI
                     LHKRPDLKVIITSATIDVERFSKHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGIL
                     NAVDELQAEGRGDILIFMNGEREIRDTAEALQKQELRHSEILPLYARLSAAEQQRIFQ
                     PSGGLNRIILATNVAETSLTIPNIKYVIDTGTARISRYSYRTKVQRLPIEPISQASAN
                     QRKGRCGRTSEGICIRLYSEEDFNSRPQFTDPEILRTNLAAVILQMTSLGLSDIANFP
                     FVDAPDSRQIQDGIRLLEELQAIIPNEKIPSTACGGGLGRGEIRSNDGTPPLPTSPRK
                     RGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAKNGSLHEVMMIVSALSIQDPRERPQEK
                     QQSADDKHRRFADKESDFLAFVNLWHFIQAQQKELSKNQFRNLCRKDYLNYNRVREWQ
                     DIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLLSHIGLKDNEKMHYLGARNAHFF
                     IFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEWVEPLAVHLTKSSYSEPHWAK
                     SKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFIRSALVEGECHNNYKFFKEN
                     HRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVVSSKHFDTWWKQASKKDPEL
                     LNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFEVGKDHDGVTVHIPLPLLNQ
                     VEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGRAEPFKKPLLDNL
                     SHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKKLQESENLDELKFALKDEVQ
                     NTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQTAVGVKLFETE
                     FEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDDCIACAV
                     DQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQVEKCLTLAYELNKRLKGKLD
                     FTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLTAIERRLDKLLVDSNTDRAK
                     MLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELRVSLFAQQLGTKYPISDKRI
                     LNVINEIK"
     gene            18430..21234
                     /locus_tag="PXF40_001274"
     CDS             18430..21234
                     /locus_tag="PXF40_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL5802614.1"
                     /translation="MYKIKHSFNKTLIAISISSFLSIAYATESIENPQPIIQLSESLS
                     SKYSGKGVKLGVMDEGFMVKHPRHSSHLHPLIHQLTTPEGEVRIYDASYPQFEVNPVE
                     KEDGIDLIPSLETHGAGVAGIIAAQADKTLGDGYSGGIAKGAELYVATKSYKRTLEKV
                     IQDAKKELENAKDEEDEKTPSLDQMAKNDLLASKEKEMAIERAEWASGLNKLLDNNVF
                     AINNSWNPFSISDDINVVDKFYQSIKQNKHNPLLQAIMRAKNSNTLLVFAAGNESKKQ
                     PGVMALLPRYFPELEKNLISAVAVDKEQKIASYSNHCGASKNWCVAAPGDLHVLIGVA
                     DEHKKPQYGLTKEQGTSFSAPAITASLAVLKERFDYLTATQIRDTLLTTATDLGEKGV
                     DNVYGWGLINLKKAVNGPTQFLNDETITVTRDDHWSNPLASQFKITKKGDKSLHLDGE
                     NHLDTVAVEEGRLALNGKTKVKTISNHANLAVNGTEVEQNYSSSGQSQLEVLGKSGLI
                     ANAQANIHLAGSLKIDDKLTEKTEAGDVSATVVQLKDKATYQGGFTQLVENENLAKRG
                     LIQDLYFKESEIIAKVNKPLTDEKADTNGQAGLALLNALRTTPIAYRRSWYNGWLQSA
                     LEQRKLDNLHYAVSNNIYADSLELLRSQNAKGLTQAQQHLFTAYHTPLQTTVWAEHLN
                     QKQSASSKHTDVKHHQSQLGVNHKLADKTVLSATLSQQKNRLEKPFAQATLKQTALNI
                     GLRYHLDNAWFSEATLQFARQKYQQSRRFASHQLGTAETRGSTLGGEMRIGYQFMPNQ
                     WIIEPSLGVQWIQTKMNGLNESGELATQTAAMRYRDVNIVPSVKLQRTFQLEQGSISP
                     YIGLNYLHRLNGKITKITSNIAGKTLHSEATTKRNRQLNGEVGVKLHYKNWFTAMNLD
                     YSRVKSANLFGWKVNVGFSF"
     gene            complement(21375..21812)
                     /locus_tag="PXF40_001275"
     CDS             complement(21375..21812)
                     /locus_tag="PXF40_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HDL5802615.1"
                     /translation="MDWFFNWIGWSILGFVLLALELVLPGVFIMWWGFASLILAFIVA
                     LFTLGQALQIALFAIIATIFSLIWWKYQHGKDKKEDQSSSLNSREHAMLGAQGFVVEI
                     LPNGIARGKFGDTTWRVIGNNLQVADKIEVQKVEGITLFVRKQ"
     gene            complement(21848..22768)
                     /locus_tag="PXF40_001276"
     CDS             complement(21848..22768)
                     /locus_tag="PXF40_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HDL5802616.1"
                     /translation="MNFDLPIVSIAFVVLVLVALSSTIKIVPQGYHWTVERFGRYTKT
                     LSPGLNIVVPFIDRIGRKMNMMEQVLDIPSQEVISRDNASVAIDAVCFVQTVDARRAA
                     YEVNHLEQAIVNLTMTNMRTVLGSMDLDDMLSQRDLINGRLLSIVDEATNIWGVKVTR
                     IEIRDVRPPKELVAAMNAQMKAERNKRADILEAEGIRQAEILRAEGEKQSRILKAEGE
                     RQEAFLQAEARERAAEAEAKATQMVSEAIAKGDTTAINYFIAQKYTEALKEIGSSDNS
                     KVVLMPLEAGNLIGSVAGIAEILKSNKTSS"
     gene            complement(22784..23473)
                     /gene="ung"
                     /locus_tag="PXF40_001277"
     CDS             complement(22784..23473)
                     /gene="ung"
                     /locus_tag="PXF40_001277"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HDL5802617.1"
                     /translation="MKTWTEALGEEKQKAYFQQILQYVHNERLAGKVIYPPQNEVFSA
                     FALTEFSDVKVVILGQDPYHGPNQAHGLAFSVKPPVAPPPSLVNMYKELSEDIEGFQI
                     PPHGYLIDWAKQGVFMLNTSLTVEQGRAGSHSQIGWEIFTDKVIAQLNQHRDNLVFLL
                     WGSHAQRKGQFIDRNRHCVLASPHPSPLSAYRGFFGCKHFSKANNYLISQGISPINWQ
                     LSVDVSYSSTH"
BASE COUNT         7312 a         5006 c         4775 g         6452 t
ORIGIN      
        1 aataaaacag atatttagaa tttaatgata tttttgtaaa aaaatttaaa aaaatttgtt
       61 ttctttgaag tttcagatca aatttggtag cctttgatat tattttattg ttaggaatag
      121 attatgactc tcccatttcg tgcaattatt tccgatcttg atggcacact attaaatgcc
      181 aatcataaaa ttggtgattt cactattgat acattagaac aactatcaaa aaaaggtgtt
      241 gatatttttt tcgccaccgg tcgcaatcat ccagatgtgt ctcagattat tgggaaagta
      301 aacgttaaaa atgcaatgtt agtcacttca aacggggcaa gagccaacaa tttagagggt
      361 aaaaaaattc tcaaccatta tttaccggaa gatcttgcct ttgaattaat gaacattgaa
      421 tttgacgacc aaaatgtgtg cttaaacagc tatcaaggcg atgaatggtt tatcaataaa
      481 gagattgcag agttaaaaaa attccatcaa gattcaggat ttagctatca agtagtaaat
      541 tttgctcatc atcacggtcg aaataccgag aaagtgtttt ttatcggcaa aactgctgaa
      601 gctttagtac cgattgaaca ttatattcgg gatacctatg gcgaccgtgt gcaaatgacc
      661 tactctgccc tactttgcct tgaagtgatg gcaaaaggag tgtgtaaagc caatgctctc
      721 gccgaattgg tcaaattacg gggctacacc ttagccgatt gtatcgcttt tggtgacggt
      781 atgaatgatg tggaaatgct aagtttagcc ggcaaaggtt gtttaatggg taatgccgat
      841 ccacgtttaa aagccgtatt accgaataat gaagtgattg gctttaacaa agatgaagcg
      901 gtggcaagct atcttcgagc cacatttggc attgtttagt tgagagcaac ttttttgcaa
      961 atttttgtct aaatttgacc gcttgtatat catcaaggaa cagtatgaaa cgtaaaacat
     1021 tagccactct tgtgctaatt gccgctctcg gaataggcgg ctatttttat tatcagcaac
     1081 aaaccaataa accgcaaatc cattacatta cccaagctgt cacacgggca gaaattaaca
     1141 aaaatgtgct ggcaaccggt tcggttcgag cgaataaacg caccgaagtg ggggctcaag
     1201 tttcgggcaa aatccaaaaa ctctatgtcg agctcgggca atcggtgaag caaggagatt
     1261 taattgcaga tattgattcc agcaaccaga gcaacacctt aagcaccgct caagcccggc
     1321 tttcttctta taaagcacag ctcacctctg cacaggttgc acttgaagta gctcaatcga
     1381 actacaaccg cttaaataaa ctctatcggg caaatagtgc ctctttaaac gatcttgaaa
     1441 cggctaaaaa taccttagct tcagccaaag ccacggtgga taacattaaa gcacaattaa
     1501 aatcggctga aatttcggta aacgatgcta aaaccaactt aacttatacg caaattatct
     1561 cgccaatgga cggcgtgatt gtgtctgtac cggtttctgt cgggcaaacg gtcaattcca
     1621 atcaaacttc gccaactatt gtacaggtag cagatttatc taagatgctg attaaacttg
     1681 aaatttcgga gggcgatatt gcacaggtta aagtcgggca aaaagttaag ttttccaccc
     1741 ttgctgagcc aaatcgagaa tatagtgcta ccattgattc agttgatccg gcactcacca
     1801 cgctgaccga taataactac accgaacaat cgggtaatac cgaagcggtt tattactacg
     1861 ctaatgtttc cgttgataat gccgataaca gtttacgcat cggaatgact actcaagccc
     1921 aaattactat tgataaacgg gaacaggttt tagttgtacc caccagcgta atcaaaaaac
     1981 gtggtaaaga gaattatgtg ttggtgctgg aaaatgagca gtcggttgaa agaaaaatcc
     2041 aaattggcat ttcggatacg caaaataccg aagtattagc aggcttaaat gagggtgatc
     2101 aagtgattgt tacccaaaga gcggatgatg aaaaaatcag cactgcacgt ggaccaagaa
     2161 tgttctaaat tctaaacaac aagcggttaa attttctgaa cattttgcaa aaaattagaa
     2221 aaatttaacc gtttgtctat tctttattaa aacattaaaa cgtctgtatt aaaacgaatt
     2281 ttatttttcg ttatcgtttt tcattttagc gaaaatcatc gccaaaatcg ggcctgaaat
     2341 attgtgccag aagctaaata ccgcacttgg caccgcaatg atagggttgg ctttaaagtg
     2401 taatgcggca agtgctgccc ccaatcctga gttttgcatc cccacttcaa tcgccaccgc
     2461 tttgctgtct gcaatcggta attttaataa acggctcgcc aaataaccga ttaaataacc
     2521 taaaccgttg tgtaatgcta ctaccgcaaa aattaataaa ccggattcaa taatacgatc
     2581 tcggctaact gacaccaccg ccgtgacaat taatacgatt gcaatcactg aaattaatgg
     2641 cattgtttgg ctaaattgct ctactttttg tttgaaaata gtacgaatca ccacgcccac
     2701 aaaaattggc aatagcacca tttgcaacac cgaaataaac attgccgttg cattaatttc
     2761 taaccattgg ctggcaaata aatagaaaat tgccggcgtg agcactgggg caagtaaagt
     2821 tgaaatagtg gtacaagcta ccgataacgc tgtgttgcca cgagccaaat aggtcatcac
     2881 gtttgaagaa gtaccgcccg ggcaacaacc aactaaaatc acaccaatgg ctaaatctgc
     2941 gggtaagtta aatgcttttg ccaatccata agctacactc ggcataccac gaattgagcg
     3001 atcacgccga taatcactga tttcggattt ttcgttacct cggcaaaatc tttgaaagtt
     3061 aaggttaacc ccattcccaa catcacaatc cctaacagat aaggaatcca aggcaggaat
     3121 tgcttaaagg tttccggaaa ttgtgctgcg ataaaagcaa aaaacaccac ccaaatggcg
     3181 aaggttttgc tgataaattg tgtaaatttt aataatgttt gcatatagcc tctgtgtaat
     3241 tgttataaaa aggttactag gctaccttag tttgctttaa aagtgaatag gagcaataaa
     3301 ctattagcca taagcaactc tttttaggta taatcgctct gtttatcaac aataaaacta
     3361 aggatatacg tatgaaaaac atcaaacttt ctgctatgag cctcacagct ttatttgtat
     3421 taactgcttg ttcgcacacg cataaaaaca gcgatgagca tcatcaaatg gtgttgcaag
     3481 agcaagctac attagggata aactggatgc aacaatccgg cgaataccaa gctcttgccc
     3541 atcaagcatt caatgcagcg aaagtggcat tcgaccaagc caaagtgaaa aaaggcaaga
     3601 aaaaagccgt ggtagtagat ttagatgaaa ctatggtgga caacagcctt tatgccggct
     3661 ggcaggttaa aaaccacaag ccgtttgatg gtgaaagctg gactcgttgg gtaaatgccc
     3721 gccaaaccgg agcgattgcc ggtgcagtgg aatttaacaa ctacgttaat agccacaaag
     3781 gaactatgtt ctatgtttca aaccgtaaag acagcagtga aaaagccggt actattgatg
     3841 atatgaacaa attaggcttt agtggtgtga gcgaacaaac actcttgttg aaaaaagaca
     3901 aatcgaacaa aacccctcgc tttgaagaaa tcgaaaaaca aggctatgaa atcgtgctct
     3961 atattggcga caacttaaac gatttcggcg atgcgactta ccgtaaatca aacgcggaac
     4021 gccgtgcatt cgtagccgaa aacagccaac aattcggtaa aaaattcatt atgttaccga
     4081 acccgaacta tggcgactgg gaaggcggtt tagataaaga ttactacaaa ggcaatgctg
     4141 aaagccgtgt taaaatccgc cacaatgcaa ttaaagcttg ggacggcaaa taatccgtcc
     4201 ttaatcaggt tgtaaaaaca cgaaacaatg accgcttgtc aaggctatgc tctgcaagcg
     4261 gtcatttttg tataaaactt tgcaaaagtt tgttaggata aagcaaaatc cattttctaa
     4321 ggaaaccgat aatgacagca atgaaaattt cactttctac tcaaaacgcc cctgaaattt
     4381 ggggtaaaaa tgctattctt tccgcaaatg atgcggggtt taccgtacat aatccgaaca
     4441 acgatttagc cactattcaa aaagccgccc gcaaaattaa aaatcaaggt atttcaaccg
     4501 tggagctgac cggcgatagt tgggatttag aatcctgctg ggcgtttcat caaggatttc
     4561 attcggtaaa aaatcaaggc tcggtacaat acccagactt agacgaacag caagccgaat
     4621 ttgataaccg tgtaaaatgt gccactttcg tgcgtgaatt aattaataag ccatcagata
     4681 aattaacccc tgaaaaatta gccgaacaag cggtcgagtt tatccaaaaa atggcaaaac
     4741 cgaatacggt ttcttaccag atcattcgtg gcgaagcatt acaagaacaa ggctatcacg
     4801 gcatttggac agttggaaaa ggctctgcca atccgcctgc attcttagta ttagacttca
     4861 acccaaccaa cgatgaaaac gcacaggtac tggcttgctt ggtcggcaaa ggcattacct
     4921 ttgacaccgg cggttatagt ctaaaaccaa gcgatagtat gagcacaatg cgaaccgata
     4981 tgggcggagc ggcactttta accggctcac ttgcttttgc cattgctcga ggcttgaata
     5041 aacgagtgaa actctacctc tgctgtgcgg aaaatatggt cagccacaat gcgttcaaat
     5101 taggcgatat tatcacttac cgcaatggcg taactgttga agttttaaac accgatgctg
     5161 aagggcgttt agtgcttgcc gatggtttaa ttgatgcgtg caagcaaaat ccacaattta
     5221 ttattgatgc tgcaaccctc acaggagcag caaaagtcgc agtcggcaat gactaccact
     5281 cggtgctttc aatggacgac aacctaaccg aagcactatt taagtctgcc aaaacggaaa
     5341 atgaaccgtt ctggcgttta ccgtttgaag aatttcaccg tgggcaaatt gcttcttcct
     5401 ttgcagacat cgccaatatc ggctctgtgc cggtgggggc tggggcaagt accgccaccg
     5461 catttttatc ttactttgta gaaaactacc agcaaaactg gctacatatt gacgcctctg
     5521 ccacattccg caaaacggcg agcgatttat gggcggcagg agcaaccgga ctgggaataa
     5581 gaacagtagc gaatttattg ctttcaaaat agaaacttcg taggggcaaa tcactatttg
     5641 ctccataaac aattaaataa ctatggctaa atcaaattac attacccgtt caggctggca
     5701 agccttagat caggaattaa aatttctatg gcgggaagaa cgcccgaaag tgactcaagc
     5761 ggtgtctgat gctgccgcat tgggtgatcg aagcgaaaat gccgaatata tttacggcaa
     5821 acgccgtttg agagaaatcg accgccgtgt gcgtttttta tctaagcggc tagaggtgct
     5881 acaaattgtt gattatcacc ctaaacaaga aggcaaagtc tttttcggcg cttgggtgga
     5941 attagaaaat gaagagggcg aggcaaaaca gtaccgtatt gttggttgcg atgagttcga
     6001 cccagcaaaa aactggattt cgattgactc ccctgtcgcc cgagccttaa tcggcaaaca
     6061 ggttgatgat gaaattaggg tagaaactcc gcttggtaaa gtgttgcttt atatcaataa
     6121 gatttggtat gagcaagcga gttaattacc cataaagggg cgaaaaattt tcgcccctac
     6181 acatatttac ccaaacaacc gatccatttc ttcaatcaac tgcttagtcg gcttgtcaaa
     6241 ataaacgccg ttatcatttt cgccgttcat tgcccttaag aacaagtaag ccactccgcc
     6301 gaagtctcgt tcataatcgt atttttcacc taaacgggca gttagataac ggtgtaaggc
     6361 gagagtgtaa agcagatatt gcaaatcata gcgttgtctg cccatttccc gttgaatgtg
     6421 ttctttcgca taattttgtg gcagatagcc taagaaattc gatttgtaat caattaagta
     6481 gaatttctcc tccacttgca cgatacaatc tacaaagcct cgcacaaaac cttctaattg
     6541 cggtaattgc aattcaggta aagtttttgc taaagggcta tgttgcttta ataacgcatt
     6601 taattgatgt aaggctttat cattttttaa gcgtaaatag aattgccact cgtttaatcg
     6661 tttggtttca tcaatcgctt ttaagcagaa atttgcctct gccaaagggg tagttagaat
     6721 acgctcaaac cataatgctg ttggttcaat ccattcctcg cttagcccta attgctcgca
     6781 tactttagca acagcctctc tatcaatttg ttcgttaaat tggcaatgct caaaaaagtg
     6841 atgtaacacc gtgcccactt taataccgtg tgggaattgg aatggcgaga aagcggcagt
     6901 ttcacttgaa taacctgcct caatggtttc tatatgtaca tctcgatctt gggctaaatc
     6961 cattaccctt tctgatttcc cttcactaaa acgctcgtgt tgggcataaa gtgaagtaaa
     7021 gctggtaatt tgaccaacca cacggatatt gccactaaag gtttttgctt ggtaatcgtc
     7081 tgaagattgt tctccttccc acagtgagaa aggtaattcc ccggctactt caaccaaatt
     7141 agcagcaatc cgtttttggc taaaataatc tgaaacaggc acttttcctg taggtatttc
     7201 cccgtctgct aacaagtaat ggagtggaga ccagccggaa atctctttcg gcaacactaa
     7261 gttaagctga gattccgcgc gggttaatgc cacatacagc aaacgtaaat cttccgcata
     7321 agcctcatac tgtagcgaaa aacttgcctc ttctgagcct aaacaccaat ccagcgcacc
     7381 ttgagaattg cgatataaac ttaatgctgt ctgcgtgtct ccctcacttt tttgtgaaac
     7441 aaaaggtaac caaacaattg gatattgcaa gcctttcgag ccgtgaatcg tcacaatttt
     7501 gattagctcc tcttcacttt ccaaccgaag ttgttgctcg tcattaaaat cgggcgaatt
     7561 aacttgcttt tcataccacc gcaacagttc agcttcagac tctaacgctt gcgaggtttc
     7621 ctgcaaaatt tcggttaaat gcaataaatc cgtaatcaag cgatccgcat tttccaaacc
     7681 tttcaaacgt tcgataatgc cctgctccaa gtagatttta tgcaacatcg gcagaacgcc
     7741 ctgctctttc caaatgttgc tgtattccac aaactgattg actttcagat cccaaagttg
     7801 ctcattttcc ttatagcggt ggatctctgc cgccgttaag ccccacaagg ttgagcctaa
     7861 cgccgataat aatgccttgt aatgatacgg attcagtgcg gcttgcaata accaacacaa
     7921 ttctgttgca atttccgaac caaatacaga agctgattca gctaaataga cggatttgat
     7981 attacgtttt gccaacgcct ttttgattcg cttagcttgt gaaccttttc ggactaaaat
     8041 cgcaatatct tttgcagcaa aggattgaaa ttcgccgttt ttttcaactc cgaatttgcc
     8101 ttgagccatc gcctcaagct gttgatgaat ttgataagca cacatttcag ccaaatcatc
     8161 taatttactg ttttccgtga tgtagcctac aaaatgccct tgctcactaa ctaactgacc
     8221 tttttggcta tcagcctcca ctgggtgaaa gccaatatcc tcataaagaa acggagagtt
     8281 atcatttgca aaagaaaaca aattattgac cgcttgcacc acttcaggca acgaacgcca
     8341 gtttttgccc aatgtgaatt gttcatcagc ctgctttgct gctcgcaaat acgtgaaaat
     8401 atccgcccca cggaatttat agatcgactg tttcgggtcg ccaatcataa taaagccgtt
     8461 ctctgcattc tctgccataa aaatttggct gaaaatttca tattgggtta aatcggtatc
     8521 ttggaactca tcgatcatcg caaaaggata catcgcccga attttctgag acaaggcttc
     8581 gcccgtgtgt agatttttca acgcttggtt tagcattgtg agtaaatcat caaaactgcg
     8641 ttgtgggtgc gattgtttgt actctgccaa ttttgctttg agagcaatta aaaattgata
     8701 ctgcaacatt gctgacaagc tgttttcaaa acgttccttg taagcggtca aaaaagcctg
     8761 attttttgca agatgagggg aatctatcgg ctcacagctc tttttcgtgc cagccgcaat
     8821 tttctctgta gtgaataaat aaagccctgc cgggaaatgg ttatgttgcg aattagccca
     8881 ctggttcatc acttccacac cggcttcaaa agtggtcgct cgataccaac ctccgtgcag
     8941 cgtaatttta tgctttaaat cgtggcggat agtttcaacc agttcatctg aatgcgtttt
     9001 ccaataggat ttcacctcat taataaactg ctgatattga gccaaatgct cggcaatatc
     9061 ttgatttaaa gaggcatttg gttcaggtaa ttcagtagat aaataacgcc ttaccgcatt
     9121 gagggcatat tccggcgtac caagttgttc ggcaaccgca taagtgatgg ctaaatcttg
     9181 cggatagaat tgctctcgcc agacttcttc acttaatttt ttaagtagat cactttggtt
     9241 tggctgtaaa tccaagtcaa accgcacgcc cgactcaaac gcaaactgaa ccagcatttt
     9301 ttgacaaaag ccgtgaatgg taaacacgct ggcggtatca atttcccgtt cggcaatact
     9361 taaacgtaac aatgcttcgt gaatattcgg aatgagcgga taaatctgtg ccaaaaaatc
     9421 aaggttgttt cgataggatt ttgtactttc cacttccaaa ccatcagctt gatcttttaa
     9481 aaagtcggca cattgctgaa tatttttacg gatacggttt ttcaactctt cggttgctgc
     9541 tttggtaaat gtcaccacca aaatttgttc caccgttaac gggttgcaac caatgccgag
     9601 caataaacgc aaatacaggt tggcaatggt aaaggttttc cctgtacctg ccgacgcttc
     9661 gattaaaacg gatttattca aaggtagttg gataggattt aggtttttca tcagcaaagt
     9721 tatcttctaa aagtaaaaag cactgctatg ttccatagca gagaatctgt tatttaatcc
     9781 gttctaattt tgcaattaat tgtgcttttg gcaccgcttg tatttttcgc atttgccata
     9841 ataacaagcc accagccaaa cttaagccga tacaaaagac taaccaaaaa ccttgagcag
     9901 ccattggttg tacaatccaa tcggttcttg ccaaaatgta gcccagcggc atactcaccc
     9961 cccaataaca aaacagagta acgtataaaa tcggttgggt atgtttataa ccacgcagaa
    10021 tgccgtttgc taccgcttga atggcatccg gtatttgata aaccgccgca aaaatcaata
    10081 aatgagcggt aatcgcaatc gaaatcgggt tgttggtaaa cgcaaaaggg ataaaatttt
    10141 tcaacaaaat aataatgatg gcggcaataa tagctaaagc ggttgcggta atcagtgcgt
    10201 ggtaacttaa gattttcgcc ccctccacat ttttctgccc aagtgtttgt ccgatcataa
    10261 tggtggttgc aatgccaaac gacatcggaa tcataaaaaa tagcgagctg gtttgcaatg
    10321 cagcttggtg gctagccacc acctgtgaac caagtggtga cagaaacagc gatgaggtcg
    10381 aaaacagcat cacttcggta aaaatcgcaa aggcaatcgg cagccctaat ttgcaaagtt
    10441 ttagcaaaat ttgaccgctt ggagcatcaa tccatttctc aaacaaacga atatcttttt
    10501 gggcagaatt ggtgtagcaa taatgcaaca acataaaaaa cataatcaag ttcacaattg
    10561 cggttgctac accacagcct accgctccca tttcaggcaa gccaaatttg ccgaaaatga
    10621 aaatatagtt tagcggaatg ttcagcaata aaccgaaaaa ggtaatccgc atcgcaggtt
    10681 tagggttaga taatccatcg ttcatacaac gtaaactcac cgccagcaaa gcaggaataa
    10741 gcccaactgc cattactgct aaatattgtt gcgatttgat tgaaaactca gccggtgttt
    10801 gcattaagtc taaaatcaga tggctgttta ggaaaattgc cattaatgga atagacattg
    10861 caaacacaat ccaatagccc tgccttactt ggttagcaat taaatggcga ttgctcgagc
    10921 cgtttaagta agaaacggtt ggggtaattg cattcagcaa ccctgacaca aacagaaaga
    10981 gcggaaagta aatcgaatta cttaccgcaa tcgccgagac atcatcatca ctcaccaagc
    11041 cagccattac aatatccgcc agccccattc cggaagctga aagctgagaa ataaaaatgg
    11101 gtagggatag tttaaataat ttgcgggcat tttcaggata ttcttgccat cttaagttca
    11161 tggtttaatc tctcaaaatc taagtatgtt tttatgattg taccttagaa agcggtcgtt
    11221 tttgccaaat tttttgcaac tcaaaagaga aagcctctaa agattgctcc ctagaggctt
    11281 cagaattaat cagctattat tttgctgctt ttaactcttg gtagtatttt tcgtaaagct
    11341 caattgcatc accaacatca tcttgccatt gagatttttg taaaacctct gcagatgggt
    11401 aaattgctgt atcttcagta atttctttcg gtaatacttt taatgcttct acgtttgaag
    11461 ttgggtaacc aatcgctaac gttaattttt cagctacttt tgcacttaat aagtagttga
    11521 ttaatttatg tgcattttct ttgtttttcg catttgccgg aatggctaaa gtatcgaccc
    11581 aaagcacagg accttctttc gggaatacca tatcaaccgg tgcgttttct ttcttcgcaa
    11641 tacgtacaga accgttccat aactgaccta cagaaacctc accagcaata aatgagtttg
    11701 ccgggttatc agaggtaaat gaaagcacat ttggacgtaa ttttttcaac tcttcaaagg
    11761 cttctttgat ttcatccgga ttagttgtat ttgggttttt acctaatttt aataacgcaa
    11821 tgttgaatac ttcacgagca tcatctaata attgtacttt acctgcaaat tcaggtttcc
    11881 acaaatcacc ccaagaagtg aatgtttcac ctttgtaatc tgccgtatta aatgcaatac
    11941 ccggcgcacc taataattga ggtaatgaat atttgtttcc ttgatcgtaa ggtttattta
    12001 accaatcttg gtttaattct ttaataaccg gaagttgtgc gtgatctaat tccgctaaca
    12061 ttccttcttt cgccatttta gatacaaagt agtttgatgg agcaattaca tcataaccgc
    12121 catctttgcc ttgtaatttt aatttagcgt acattgtttc gttagattca agacttgaaa
    12181 cttcaacttt aatgccggtt tctttcgtaa attcatctaa caaaccttca ggcacatatt
    12241 cagtccaagt ataaaggtga actgtttgat ttgttgcttg aggttttgct tcagccgcag
    12301 ttgcttttgg ctctgccgct ttttcttcat tacacgctgt taatgcaact gttgctaaac
    12361 ctgctgcaaa taaacccgct aattttttca tttaagtttt ctccgttaaa gaaaagtgat
    12421 taaaaaatat agccttgcct aagggcggaa aagactaggg cattttaagc ccccccccgt
    12481 attttgcaag ccttttctga ttaaaaagtg aattattttc gcaaaaagaa agagatatgc
    12541 ttgaaatccc ttaatttatc gctatattaa ggaagattta catttccaga ttagtctttt
    12601 aaaggataaa aaatgaccac tcaaaatgaa cacttacaag aagaagtaaa acaagaagaa
    12661 attcaacctg aagttgtaac tgaagaaact caagcggaag aacaaaatac acctcaagaa
    12721 gaaccgttag ctctcgctca agctcgaatt gccgagttag aagcctatat tgcagaagcc
    12781 gacaaacgtg agcaagatat tcagcttagg gctcaagcag aaattcaaaa tatccgccgc
    12841 cgtgcagagc aagatgttga aaaagctcac aaattcgctt tagaaaaatt ctccaaagaa
    12901 ttgttaacag tggttgataa ccttgaacgt ggattagatg cccttgataa agccgtgacc
    12961 gatgaaacca ctcaagcgtt agttgacggc gttgaaatga ctcataaaga attcatcaat
    13021 acactggcta aatttggtgt ggtggcaatt ggcgaagtag gcgaggcatt taaccctgaa
    13081 ttgcacgaag ctatttcaat gcaacctgcc gaaggaattg aagccaacca tgtcagcaca
    13141 gtgctacaaa aaggctacac gcttcacgga cgagtgattc gcccggcaat ggtgatggtg
    13201 gcaaactaaa ttgtcgattt tcgacgaaga tcacaaaatc tcctaaaatt cctgcttgtg
    13261 attatgctaa attagtttat aacttaacca caagaggata attgaaatgg atgcagctat
    13321 gagcctacga tttgacaaat tacgttttgt aaaacgcttg caagaagcca atcaaacacc
    13381 tgaaatggct gaggcatttg ctaatgctct cgatgaagcc ttagagcaaa gtcaaagccc
    13441 actagcaaca aaagctgatt tgcaacttga acttgaaaag ctaaaaaatg aaatcaatac
    13501 cacgatattt aaagcaatta ccttaaatat cacaattctt ggctttttaa tggcaataat
    13561 gaaatttatt aactagctca acgtttaatt aaccactccc ttacttctat gaagtaaggg
    13621 tttttacgtt ttaatcctat gactttacaa tttaacgcag tggcacttct acttgtggtg
    13681 ctgattattt tagggctgat cagccaaaac agtgcggtta ctatttcagc cgccgtattg
    13741 ctgattatgc aacaaacctt actttctaaa tttatcccct ttgtcgatca atacggctta
    13801 aaaatcggga ttatcatttt aaccatcggc gtacttagcc ccttggtttc agggcgaatt
    13861 acgcttcccg aacttgccca actattgaac tggaaaatgg cactctcaat aattgctggc
    13921 gtgctggtag cgtggctagg tggcaggggc gtgaatttaa tgggcagcca gccggtgttg
    13981 gtaactgggc ttttaatcgg cacggtgatc ggcgtggcgt tcttaaaagg cgtaccggtc
    14041 gggccgttga ttgcggcagg gattttgtca ctgattgttg gtaaaaccta atgtagggtg
    14101 gacgtaagtc cacgcataaa atccctattc tgttacgtgg gcttacgccc accctacaat
    14161 aaatcacaag gtcttaatgc aaaagagaaa ttaaatggaa acacctttgc aaaaaaatca
    14221 taagaaacca ccgcttgtga agctggaaaa tatcaccacc gccgatttcc gccgcctgct
    14281 cggtcgctta aaaggggcgg aaaatattaa aaacatcgat cacaagcggt cagttttggc
    14341 agaaatttcg caagatctca ccgcttgtca ggcacgtttt ttcgcacgaa ctcagcacgc
    14401 ccaaaacctg aaaattgact accctgatct gcctgtttcc gctcgccgtg aggaaatttt
    14461 aaaactgatt agcgaaaatc aggtggtggt gatcgcaggg gaaaccggtt cgggcaaaac
    14521 cacccagtta ccgaaaatgt gcttagaact cgggcgtggg gtgaagggct tgattgggca
    14581 tacccagccc cgccgaattg ccgcacgttc ggtggcgact cgcattgccg aagagctgaa
    14641 atcggaactg ggcgagacgg tcggttacaa agtccgcttt aacgatcaag tcagtgaaaa
    14701 cagcttaatc aagctaatga cggacggtat tctgctggcg gaaatccagc acgacagcta
    14761 tttaaatcag tacgatacgc tgattattga cgaagctcac gagcgttcgc tgaacaacga
    14821 ttttattttg ggttatctga aacaaattct gcacaaacgc cccgatctga aagtgatcat
    14881 cacctcggca actattgatg tagaacgttt ttccaaacat ttcaacaacg ccccgattat
    14941 tgaagtctct ggtcggacat tcccggtgga agtgcgttat cgcccgatag tggaagatca
    15001 agatcaactg caaggtattc taaatgcggt ggacgaactg caagccgaag ggcgtggcga
    15061 tattctgatt tttatgaacg gtgaacggga aattcgtgac actgccgaag ccttgcaaaa
    15121 gcaggaactg cgacatagcg aaattttacc cctttacgcc cgcttatcgg ctgccgaaca
    15181 acaacggatt ttccagccaa gcggtgggct aaaccgaatt attctggcga ccaacgtggc
    15241 agaaacctcc ctcactattc cgaatattaa atatgtgatc gacaccggca cggctcgtat
    15301 ttctcgttat agctaccgca ccaaagtgca acgcttgccg attgagccga tttcgcaagc
    15361 ctccgccaac cagcggaaag ggcgttgtgg gcgaacctcg gaagggatct gtatccgcct
    15421 ctattcagaa gaggatttca acagccgtcc acaatttacc gatcctgaaa ttctacgaac
    15481 taaccttgca gcggttattt tacaaatgac ttcgcttgga ttgagtgata ttgccaattt
    15541 cccgtttgtt gatgcccctg acagccgaca aattcaggac gggattcggt tgttggaaga
    15601 attacaggcg attattccaa atgaaaaaat cccctccacc gcttgcgggg gagggctagg
    15661 gaggggggaa atccgttcta atgatggcac tccccccctc ccaacctccc cccgtaaacg
    15721 gggggatggg tttagattaa ccccaatcgg tcgccaactc gcccaactgc cagtcgatcc
    15781 tcgcttaggc agaatggtga tcgaggcggc gaaaaacggt tcgttgcacg aagtgatgat
    15841 gattgtgtca gctctctcaa tccaagaccc tcgtgagcgt ccgcaggaaa aacagcagtc
    15901 ggcagacgat aaacaccgcc gttttgccga taaagagagc gatttcttag cctttgtgaa
    15961 tttgtggcac tttatccaag cccaacaaaa agaactgtcg aaaaaccagt tccgtaatct
    16021 ctgccgtaag gattatttga actacaaccg tgtgcgggag tggcaggata tctaccacca
    16081 actccgcctt gcagttagag aaatgggctt aaaaattaac agtgagccgg caagttatca
    16141 gccgattcac accgccctgc tcgccggctt gttgtcgcat atcggcttga aagataatga
    16201 aaaaatgcac tatttaggag caagaaatgc ccactttttc attttcccga actcggcact
    16261 tttcaaaaaa cagccgaaat gggtaatggc cgcagagctg gtggaaacta ccaaactttg
    16321 gggacgaatg gtcgctcgca ttgagccgga atgggtggaa ccgttggcag tacacctcac
    16381 taaatccagt tacagcgaac cacactgggc gaagtcaaaa ggagcggtaa tggcatcgga
    16441 aaaagtgtcg ctctacggca ttccgattgt ggcacaacgc tcggtgaatt atggctcgat
    16501 agacccaacc gtcagccgtg agatttttat ccgctcggcg ttggtggaag gcgaatgtca
    16561 caacaattac aaatttttca aagaaaatca ccgcttgatc cgtgaagttg aggcattgga
    16621 acacaaatcc cgccgccgtg atattttggt ggacgagcag gtgctgtttg agttttacga
    16681 tcagcggatt ggcaccgaag ttgtgtcgag caagcatttt gatacttggt ggaaacaggc
    16741 aagcaaaaaa gatcctgaac tgctgaactt tgaaaaatcg ttcctgatca acgacaacgc
    16801 caaccttgcc agcgagctgg atttcccgaa tttctggcat caaggcgatt taaaactcaa
    16861 actgagctat cagtttgagg tcggaaaaga tcacgatggc gtgacggtgc atattccgct
    16921 accgctgctt aaccaagtgg aacccgaagg tttcgattgg caaattccgg ggctacgcca
    16981 cgagctgatc gtctcgctga ttaaatcttt accgaaatcg ctacggcgaa attttgtgcc
    17041 ggcgccgaat tatgcggacg cctttttagg gcgagccgag ccgtttaaaa aaccgttgct
    17101 ggacaatcta agccacgaac tacgccgaat gacgggtgta ttggtcgagc ctgaacagtg
    17161 ggatttaagc caactgccgc cacatttgcg gatgactttc cgtgtgattg atgataaagg
    17221 caagaaactg caagagagcg aaaaccttga tgagctgaaa tttgccttga aagatgaggt
    17281 gcagaacacc ctttccaaca ttgccgatga cggcattgag caaagtggtg tgcatatttg
    17341 gaattttgcc gaattgccac agttctatga gcagaaaaaa gcccatttca gcgtgaaagc
    17401 ctaccctgcg attgtcgatg aacaaacggc tgtgggggtg aaactgtttg aaacggaatt
    17461 tgagcaggct cgtgcaatgc aggcaggact tcgccgtctg ctgttgctaa atgtgccatc
    17521 gccgattaaa tatctacacg aaaaactgcc gaacaaagcc aagctgggct tatattttgc
    17581 cccgttcggc aaagtattgg agctgattga cgactgcatt gcctgtgcgg tagatcagct
    17641 ggtagaagag ttcggcgggt ttgtctggac ggaggaaaaa ttcacccaac tgcacgaatt
    17701 tgtgcgggca aatttaaacg ataaaaccgt agaaattgcc aaacaggttg aaaagtgcct
    17761 cacactggcc tacgagctaa acaagcggtt aaaaggcaag ctcgatttta cgatggcgtt
    17821 tgcgttaagc gacatcaaaa cccaaatcga agggctgatt taccccgact ttgtcaccaa
    17881 aaccggctac gcccgccttg cagatttata ccgttatttg accgctatcg aacgccgttt
    17941 ggataaactg ttggtggaca gcaacaccga ccgagccaaa atgctacggg tggaagcagt
    18001 gcaagaggca tataaacagc tccttgccaa actgccaaaa tccaaagcgg tgccggacga
    18061 ggtactggaa attcgatata tgatcgaaga actgcgggtc agtctgttcg ctcaacagct
    18121 cggcacaaaa tacccgattt cggataagcg gattttgaat gtgatcaatg aaataaagta
    18181 atattcccta tacaacaagc ggtcagataa gtaaaaaatt ttgcaactct gaccgcttgt
    18241 tttctcgaat acctattcct ctcgcttcag aagcaaacct gctacatttt tttgattaaa
    18301 aaaatctcaa gataaaaatt agaaaactaa atatatcaga aagtttgatc tttatcatta
    18361 actagattat tattatttgt aataaaaaat taactacgta aaataagctt attttttgga
    18421 ggtaaaatta tgtataaaat aaagcattca tttaacaaaa cacttattgc aattagcatt
    18481 tctagttttt tatctattgc atacgctaca gaatcaatag agaatccaca acctatcatt
    18541 caattatctg agagcctcag ctcaaaatat agtggcaagg gtgttaaact aggcgtaatg
    18601 gatgagggct tcatggttaa acaccctcgc catagttcac atcttcatcc tcttattcat
    18661 caattaacaa cacccgaagg cgaagtaaga atctacgatg caagttaccc tcaattcgag
    18721 gtaaaccccg tagaaaaaga agatggaatt gatcttattc cttctcttga aacacacggt
    18781 gcaggtgtag ctggtattat tgccgctcaa gcagataaaa ctcttggtga tggctatagt
    18841 ggtggtattg caaagggagc tgagctttat gttgcaacga agtcatataa acgaacttta
    18901 gaaaaagtta ttcaagatgc taagaaagaa ttagaaaatg caaaagacga agaggatgaa
    18961 aaaacgccaa gtctggatca aatggcaaag aatgacttat tagcaagcaa agaaaaagaa
    19021 atggcaattg aacgtgctga atgggcatcc gggctgaata aattactaga taataatgtt
    19081 tttgcaatca ataatagttg gaatcctttt tctattagcg atgacatcaa tgttgtagat
    19141 aaattttatc aatctatcaa gcaaaataag cacaatccgc tacttcaagc tattatgaga
    19201 gccaaaaata gcaacacctt attagtcttt gctgctggta atgagagcaa gaaacagcca
    19261 ggcgtaatgg ctcttctacc acgttacttt cccgagcttg agaaaaattt aatttctgcc
    19321 gttgcggtag ataaagaaca aaaaattgct tcatactcta accactgcgg agcaagtaaa
    19381 aactggtgtg tagcagcacc gggcgattta catgttttaa ttggcgttgc tgatgaacat
    19441 aaaaaaccac aatatggctt aacaaaagag caaggtacgt cattttcagc acctgctata
    19501 actgcttcat tagcagtatt aaaagaacgc tttgattatc tgactgcgac tcaaattcgc
    19561 gatactttat tgactaccgc cactgattta ggtgaaaaag gggtcgataa tgtttatggc
    19621 tggggtctca ttaacctgaa aaaagctgtt aatggcccaa ctcaattcct aaatgatgaa
    19681 acgattaccg taactcgtga tgaccattgg tcgaatccac tcgccagcca atttaaaatt
    19741 acaaaaaaag gggacaaatc actgcattta gacggcgaaa atcatttaga tacggtagca
    19801 gttgaagaag gtagattggc cttaaacggt aaaactaagg tgaaaacaat cagtaaccat
    19861 gcaaatttag ctgtcaatgg aaccgaagtt gagcaaaatt attcttcgtc tggacaaagc
    19921 caattagaag tgttgggcaa atctgggcta attgccaatg ctcaagccaa tatacattta
    19981 gccggctcgt taaaaattga tgataaatta acagaaaaaa ccgaagcagg tgatgtttca
    20041 gcgaccgtag tacagttgaa agataaagca acttatcaag gcggatttac acaattagtc
    20101 gaaaacgaga atttagccaa acgagggtta atccaagatc tctatttcaa agagagcgaa
    20161 attatcgcaa aagtgaataa gccactaact gatgagaaag ccgatacaaa cgggcaagcc
    20221 ggtttagcat tattaaatgc gttaagaact acacctattg cctatcgccg tagttggtat
    20281 aacggttggc tgcaatctgc actcgaacaa cgtaaattag ataatctgca ctatgctgta
    20341 tctaacaata tttatgcaga tagccttgaa ttgctacgta gccaaaatgc caaaggctta
    20401 acccaagcac agcaacattt gtttacggca taccatacac cactgcaaac gactgtttgg
    20461 gctgaacatt tgaatcaaaa acaatcagcc tcatcgaagc ataccgatgt taaacaccac
    20521 caatcacaat tgggagtaaa ccacaaactg gcagataaaa cggtacttag tgcaacactt
    20581 tcacagcaaa aaaaccgctt agaaaaacca tttgcacaag ctaccttaaa acaaacagca
    20641 ttaaatattg gcttacgtta tcatttagat aacgcttggt ttagtgaagc tacattgcaa
    20701 tttgctcgcc agaaatatca acaaagccgt cgatttgcta gccatcaact aggtactgca
    20761 gaaaccagag gttcaacgct cggtggtgaa atgcggatcg gttatcaatt tatgccaaac
    20821 caatggataa ttgaaccaag ccttggcgta caatggattc aaaccaaaat gaatggttta
    20881 aatgaaagtg gcgaacttgc gactcaaacg gctgcaatgc gttatcgtga tgtgaatatt
    20941 gttccaagcg tgaaattaca gcgaactttc caacttgagc aaggctctat ttccccttat
    21001 atcgggctaa attacttgca tagattaaat ggaaaaataa ccaaaattac cagtaacatt
    21061 gcaggaaaaa cactgcatag tgaagcaacg acgaaacgta atcgccaatt aaacggcgaa
    21121 gtcggggtga aactgcatta taaaaattgg tttactgcga tgaatttaga ttacagtcga
    21181 gtgaaatctg caaacctatt tggttggaaa gtaaatgttg gctttagttt ctaacttatt
    21241 atggtgggac acaagcggtt aatttagggt gaaaatttgc aaatttcact ctattttcaa
    21301 ccgcttgaga gaaaaaacct tgaacaactg ttcaaggttt ttgtttagtg ttctatgact
    21361 aaataagaaa aaacttattg cttacggaca aataaggtaa ttccctccac tttctggact
    21421 tcaatcttat ctgctacttg taaattatta cctataacac gccaagtcgt atcaccaaat
    21481 tttcctcgag cgatgccatt aggtaagatt tcaaccacaa agccttgagc tcctagcata
    21541 gcatgctctc gagagttaag ggaactgctc tgatcctctt tcttgtcttt tccatgctga
    21601 tatttccacc aaataagact aaaaatagtc gcaattatcg caaataacgc aatttgtaac
    21661 gcttgcccta atgtaaaaag tgcaacgatg aaagcaagaa taagcgaggc aaatccccac
    21721 cacataataa agacacccgg taatactaat tctaatgcaa gtagtacaaa gcctaatatg
    21781 ctccagccaa tccaattaaa aaaccagtcc atactccctc catatactca attaatccgg
    21841 ttttaggcta tgagcttgtt ttattgcttt ttaaaatttc agcaatacca gcaacagaac
    21901 caatcaaatt tccagcttct aacggcataa gtacaacttt actgttatct gaagaaccta
    21961 tttctttcaa agcttcggtg tatttttgtg caataaaata gttaatcgct gtagtatcgc
    22021 ctttagcaat tgcttcagaa accatttgag tggctttagc ttccgcttct gcggctcgtt
    22081 cacgagcttc tgcctgtaag aatgcttctt gtctttcacc ttctgctttt aaaatacgag
    22141 attgtttttc cccttcagcc cgcagaattt cagcttgtcg aatcccttct gcttcaagaa
    22201 tatcagcacg tttattacgc tcagctttca tttgagcgtt cattgccgca accagctctt
    22261 tcggtggacg aacatcccga atctcaatac gggtgacttt tactccccaa atattagtcg
    22321 cctcatcgac aatggaaagt aatctaccgt taattaaatc acgctgagag agcatatcat
    22381 ctagatccat agagccgagc acggtacgca tatttgtcat ggttaaatta acaattgctt
    22441 gctctaaatg attcacttca taggcagctc ggcgagcatc aactgtttga acaaaacata
    22501 cagcatcaat cgcaacactt gcattatcac gtgaaataac ctcttgcgat ggaatatcta
    22561 aaacttgctc catcatattc atttttcgcc caatacgatc aataaaaggt acgacaatgt
    22621 tcaaccccgg gcttagcgtt ttagtataac gaccaaaacg ttctactgtc caatgatagc
    22681 cctgtggcac aattttaata gtcgaactta atgcaactaa aacaagcaca acaaatgcaa
    22741 tactaacaat cggtaaatca aaattcatcg tttgctcctt aaactaatgt gttgaagaat
    22801 aactaacgtc tactgataat tgccaattaa ttggggatat tccttgagaa atcaagtagt
    22861 tattggcttt agaaaaatgt ttacaaccaa aaaatccacg atatgcggaa agtggtgatg
    22921 ggtgcggaga agctaacaca caatggcgat tacgatcgat aaattgcccc tttctctgag
    22981 cgtggcttcc ccaaagtaga aagactaaat tatcacggtg ttgatttaat tgtgcgatca
    23041 ctttatcggt aaaaatttcc caaccaattt gtgaatgcga accggctcta ccttgctcaa
    23101 ccgttaagct ggtgtttaac ataaataccc cttgttttgc ccagtcaatt aaatagccat
    23161 gcggtggaat ttgaaatcct tcaatatctt cagataattc tttatacata ttgaccagag
    23221 aaggtggcgg ggcaaccggc ggtttaactg aaaaggctaa tccgtgggct tgatttgggc
    23281 cgtgataagg atcttgccct aaaattacta ctttcacgtc actaaattcg gttaaggcaa
    23341 aagcactaaa cacctcgttt tgcggaggat agatgacttt gccggctaat cgttcgttat
    23401 gtacatattg taaaatttgt tgaaaatacg ctttttgttt ttcttcgcct aaagcttctg
    23461 tccaagtttt cataaaacca ccaagtgtat attttttacc caaccaactc aatcatgtct
    23521 aaaaatggtt aaatttttat cgctt
//
LOCUS       DANMCL010000037        23398 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.037, whole genome shotgun sequence.
ACCESSION   DANMCL010000037 DANMCL010000000
VERSION     DANMCL010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23398
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.037"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(44..1270)
                     /locus_tag="PXF40_001278"
     CDS             complement(44..1270)
                     /locus_tag="PXF40_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HDL5802618.1"
                     /translation="MKETLLVIADDLTGANDTAVMFAESGFDTVLKTKVSALAQIHPD
                     KAQVISVSTDSRAIGEKAKELTQIAISNAIQNSIGQIYLKIDSTMRGSVKYQIEGAIK
                     AWAGLYPDVKAIICPAYPEMGRTIEAGHLYVNGVPVNETASGKDPICPVHSSSMQKLL
                     PDAQVIPCDTVDNLQASIENSEYKQIVIDAKTHEDLSMIAQVINHIGNKIIPVGSAGL
                     AQKLKNIQNQQQPERNLKLGRALIVVTSIHETSQLQVDEYISTLGGKSIVFNPSPSQL
                     INYSQSEHSLKLQLNALIRFSRDHVIIRANPAKVVNAKSANITETSKEISQHLADLSK
                     FCLDNEKFDSLILFGGDGAAALLDQMNVTEMNVQYAVVPGVPLCSIEKGNYSGITVMT
                     KSGGFGNNTLLSNIMN"
     gene            complement(1267..2265)
                     /locus_tag="PXF40_001279"
     CDS             complement(1267..2265)
                     /locus_tag="PXF40_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate permease"
                     /protein_id="HDL5802619.1"
                     /translation="MSTQTSKSIVPIYDGMNKIPGGAMVIPLILGSIIGTFFPEFLNL
                     GSFTTALFKSSAGPLIALLIFATGMQITVRSSGPVLAHTGVVLLFKTIIPALLVVILG
                     LWVGNDGVMGVSLLAMLTVVANSNGGIWLAFTGKYGDYRDKGAYVASAVNDGPFFVLL
                     FLGVSGLADIPLSLMLAAVIPLIIGMVIGNLDPKWTELMKPTGAIVIPFFAFALGTGI
                     NLQSIITGGATGIILGIVASLFTGFLVFIGYKTILRRGNQSGIGFAAGTTAGNAIITP
                     EIVAQADPTLAPFVQTATAQIAAAVLVSAILAPLFAAWVLKRQGGLEQDTIKGENL"
     gene            complement(2276..3277)
                     /gene="pdxA"
                     /locus_tag="PXF40_001280"
     CDS             complement(2276..3277)
                     /gene="pdxA"
                     /locus_tag="PXF40_001280"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HDL5802620.1"
                     /translation="MKPILGITMGDAAGIGPEVIIKALANQRIYELAHPVVIGDRKII
                     QRALPIVHSELKLRILNNLDNFVAEYGVIDILDLNNLPEDLPFAQVDPRAGKAAYEYI
                     EEAVNLAMGGKIHAIVTAPLNKEALHAGGKPFPGHTEILATLSNTKDYSMMLTSEKLN
                     VIHVTTHVQLRKACDLITKERVATVIDLAEENARILGFKEPRIAVAGLNPHSGENGMF
                     GDEDQKEIVPAIQEAQAKGFNVTGPVPPDTLFHRAANLNEFDIVVVMYHDQGHIPIKL
                     LGFDTGVNVTVGLPFIRTSVDHGTAFPIAGKGTADSRSMTEALYLGAKMANIKYATH"
     gene            3711..5075
                     /locus_tag="PXF40_001281"
     CDS             3711..5075
                     /locus_tag="PXF40_001281"
                     /EC_number="2.6.1.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005820549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminobutyrate--2-oxoglutarate transaminase"
                     /protein_id="HDL5802621.1"
                     /translation="MTIKTPIQAVLASNQYFLDRQDAMESNVRSYPRKLPFAYQKAQG
                     VWVTDVEGNEYLDFLAGAGTLALGHNHPKLIQAVKDVLDSGLPLHSLDITTPLKDAFT
                     EELLSFFPKDKYILQFTGPSGADANEAAIKLAKTYTGRGNVIAFSGGFHGMTHGALSL
                     TGNLSAKNAVQGLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEHYFENFIEDVESGVVK
                     PAAVILEAIQGEGGVVPAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGKMFAFEHA
                     GIEPDIVVMSKAIGGSLPLAVLAIKKEFDAWQPAGHTGTFRGNQLAMATGYVSLKIMR
                     EENLAKNAQERGEYLTNALRELSKELPCIGNVRGKGLMMGIDIVDERQPKDATGAYPR
                     DCDLAVAIQKYCFKNKLLLERGGRGGNVVRVLCAVNITQAECEEFIKRFKQSVAEAVK
                     AVRG"
     gene            5165..6700
                     /gene="ddc"
                     /locus_tag="PXF40_001282"
     CDS             5165..6700
                     /gene="ddc"
                     /locus_tag="PXF40_001282"
                     /EC_number="4.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2,4-diaminobutyrate decarboxylase"
                     /protein_id="HDL5802622.1"
                     /translation="MSNLEKHRQSLFCSDPKSIADYESAMNNAVKAVSDWLKEEKMYT
                     GGSIKELRAKINGFNPTQAGVGVQKSLEHLVEIFLKPSLKVHHPHSLAHLHCPTMVTS
                     QIAEVLINATNQSMDSWDQSPAGSIMEEHLIDWLRQKVGYGKGTSGVFTSGGTQSNLM
                     GVLLARDWAIANHWKKADGSEWSVQADGIPADAMQKVKVVCSENAHFSVQKNMAMMGM
                     GFQSVVTVPSNANAQMDVEALAKTLADLKAEGKIVACIVATAGTTDAGAIDDLKAIRK
                     LADEHQAWVHVDAAWGGALLLSKDFRHFLDGIELTDSITLDFHKHFFQSISCGAFLLK
                     DEANYRFIDYKADYLNSEYDEEHGVPNLVSKSLQTTRRFDALKLWFTVEALGEELYAS
                     MIDHGVYLSKEVEAYINATDGLEMLVPAQFASVLFRVVPQGYPAEFVDTLNQNVADEL
                     FARGEANIGVTKVGEHQSLKMTTLSPIATLENVRALLAQVLAEADRIKDSIVNGTYVP
                     PID"
     gene            6803..7165
                     /locus_tag="PXF40_001283"
     CDS             6803..7165
                     /locus_tag="PXF40_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NirD/YgiW/YdeI family stress tolerance protein"
                     /protein_id="HDL5802623.1"
                     /translation="MKKVLGLTLMAMALSACNSTASNGSSQANTGVAPANVISVKQVL
                     AAADDSYVTVEGTLLNKVGDETYLFKDATGQIRVEIDDEVWAGQHVGSEGNKVRLYGE
                     IDKGFNKTELDVKTLTVL"
     gene            complement(7255..7842)
                     /locus_tag="PXF40_001284"
     CDS             complement(7255..7842)
                     /locus_tag="PXF40_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5802624.1"
                     /translation="MNHLIIYAHPNPSSFNHAILEKTIAASVPNKVVVRDLYQLNFKP
                     ILDWAEFQGTLSKHYEADVAIEHQYWLEADVITLIYPLWWMGFPAILKGYLDRVLSYD
                     FAYRNGEIESIGLLTGKKMQQFVTLGNSNEKYERKGFLAAFEHTLGKGLFEFCGIRDV
                     KMHYFGNIGLKETDYTAILQQITASCSTILKEQAV"
     gene            8018..8566
                     /gene="napF"
                     /locus_tag="PXF40_001285"
     CDS             8018..8566
                     /gene="napF"
                     /locus_tag="PXF40_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HDL5802625.1"
                     /translation="MTDYPNQSLPRRSFLRGQFLDSLKSQKVSQQGYEPIRPPWANLA
                     NFLEKCTACGNCIQACETQIIVKGAAGYPEIDFSRGECTFCEKCVHSCEAEVFRAVSE
                     QPWSHKIEIQAGCLLKLGTECRSCGDSCEMRVIRFRPSLGGIAEMVLNLESCNGCGAC
                     LSVCPTSAIKIQPLQTQANRDE"
     gene            8559..8825
                     /locus_tag="PXF40_001286"
     CDS             8559..8825
                     /locus_tag="PXF40_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HDL5802626.1"
                     /translation="MSEKLSEQENWYVCSLVVQAKPEKLEEVKAEILKIPHTEIHGEK
                     TDEGKLVVTIESNVHLALSDRIDQVRDIKGVIVVSLISNYIDEQ"
     gene            8864..11362
                     /gene="napA"
                     /locus_tag="PXF40_001287"
     CDS             8864..11362
                     /gene="napA"
                     /locus_tag="PXF40_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase catalytic subunit NapA"
                     /protein_id="HDL5802627.1"
                     /translation="MELNRRDFMKANAAVAAAAAAGIMIPVKNVQADDTGIRWDKAPC
                     RYCGTGCSVLVGTKDGKVVATQGDPDAEVNRGLNCIKGYFLSKMMYGADRMQEPMLRM
                     KDGKFDKNGDFTPVSWDQAFSIMAEKIKTTIKNDGPNAVGMFSSGQTTIFEGYAKVKL
                     WKGGFRSNTIDPNARHCMASAAVAFMRTFGMDEPMGCYNDIEKTDAFVLWGSNMAEMH
                     PILWSRISDRRLSDNKVKVVVMSTYEHRSFELADTPIIFKPHSDLAILNYIANYIIQN
                     DKVNWDFVNKHTKFKRGETNIGYGLRPEHKLQQNTNAKTAGKMYDSDFEEFKKIVAPY
                     TLEEAHRISGVPKDQLETLAKLYADPNQKLVSFWTMGFNQHTRGVWVNHMMYNVHLLT
                     GKIALEGCGPFSLTGQPSACGTAREVGTFIHRLPADMVVTNPKHREIVENSWKLPAGA
                     IPDVPGFHATAQSRALKDGKMKFLWQMCTNNMQGGPNINEEIFPGWRNPETFIVVSDP
                     YPSVSAVAADLILPTCMWVEKEGAYGNAERRTQFWRQQVKGPANARSDTWQLVEFSKY
                     FKVEEVWPEELLAKAPELRGKTLYEILYRNGKVDSYQVPTNIPGYMNDEADHFGYYIQ
                     KGLFEEYAEFGRGHGHDLADFDTYHKVRGLRWPVVKDEKTGEYKETLWRYREGYDPYV
                     KAGEEVAFYGNADKKAVILGVPYEPPAEAPDEEYDLWFCTGRVLEHWHTGTMTRRVPE
                     LHKAFPTNLVWMHPNDAKKRGLRHGDKVKVISRRGEYVSNLDTRGRNKCPEGLIYSTF
                     FDAGQLINKVTLDATDPISFETDFKKCAVKVVKA"
     gene            11451..12356
                     /gene="napG"
                     /locus_tag="PXF40_001288"
     CDS             11451..12356
                     /gene="napG"
                     /locus_tag="PXF40_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HDL5802628.1"
                     /translation="MKMDPNRRQFLKNATRTAAGVCGVGMILGLQQQQSFARQGVALR
                     PPGALPEQDFLSACTRCGQCVQACPYDMLHLASLISPVEAGTPYFIARDKPCEMCLDI
                     PCMNACPTGALSEELKDIDDARMGLAVLLDHETCLNWQGLRCDVCYRVCPLIDKAITL
                     EKVHNDRTSIHAKLIPTVHSDACTGCGKCEQACVLEEAAIKVLPMDLAKGLLGRHYRL
                     GWQEKQNAGKSLIEDVHPEGLRPAYDARMPEGLHEPVYQHMEVKPDVKVATPSRATQN
                     YVPNSTTVEAPEHFPDLDLNLKGVK"
     gene            12356..13234
                     /gene="napH"
                     /locus_tag="PXF40_001289"
     CDS             12356..13234
                     /gene="napH"
                     /locus_tag="PXF40_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HDL5802629.1"
                     /translation="MAANSPKNAGLEARQKLGWWHAYRFLILRRLSQLSIILMFLSGP
                     LWNVWILKGNYSGSLLLDTVPMTDPLMTAEVLATGYRPEWTVLVGALIMVAFYGIVGS
                     KLFCSWVCPMNMVTDTAAWLRRKLGIRQTAKIPRNLRYVILAVILVGSAISGTLLWEW
                     INPVAALGRVFVFGLGATLWLVLVVFLFDLLVAEHGWCGHLCPIGATYALIGAKSLIK
                     VKVVDRNRCDNCMDCYNVCPEPQVLRVPLHGKPEESTVILSKDCITCGRCIDVCAENV
                     FAFGMRFQGSIDVKNI"
     gene            13280..13708
                     /locus_tag="PXF40_001290"
     CDS             13280..13708
                     /locus_tag="PXF40_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HDL5802630.1"
                     /translation="MRKYLAFILAVMSGFAMAEAPKLSGSIDETTESVAPGFHNPQKD
                     VGTIPTTFPFQPPLVPHSIRGLQVSKNVNHCLGCHAIEPSKTTGATRLPPSHFTDRDG
                     KVYENESPRRYFCLQCHVQQTDVNPIIQNKFESVRESQAK"
     gene            13719..14327
                     /locus_tag="PXF40_001291"
     CDS             13719..14327
                     /locus_tag="PXF40_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NapC/NirT family cytochrome c"
                     /protein_id="HDL5802631.1"
                     /translation="MLRRFCNWLRSPSKMAIGAVILISALGGIFAWSGFNAGLAMTNT
                     EEFCSDCHMNDVVPEYRASAHYSNRSGVKAICSDCHVPHEFFPKWQRKIIAAKEVYAH
                     FTGKVDTKEKFEAHRGEMAEREWARMKANSSQECRNCHNFDDMDFTQQKNIAQQMHAL
                     AQEQGKTCIDCHKGIAHNLPHMEAIQKNFIPDDLLKKAEEKK"
     gene            complement(14389..15231)
                     /gene="cpdA"
                     /locus_tag="PXF40_001292"
     CDS             complement(14389..15231)
                     /gene="cpdA"
                     /locus_tag="PXF40_001292"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HDL5802632.1"
                     /translation="MDAKRMHEYIKLPVTGVIKLLQITDPHLFSNPEETLLNVKTVKS
                     FSAVIEQINKQAKQYFDLVLATGDLIQDNNIAGYHYFAQITNSLNSPIVWLEGNHDVQ
                     PSMSEILAQYKHILPHKQILLGEQWQLLMLNTQVVGMPYGELSYSQLKWLEEKLAQYP
                     QRFTLVALHHNILPTNSAWLDQHSLKNSNELSEIFAKFKNVKAIVHGHIHQQVDDIWH
                     GIPIYATPSTCIQFKPNCDQFTLDLQPQGWREIELHENGTIETVVKRLNSNDFLPNVN
                     AIGY"
     gene            15521..15655
                     /locus_tag="PXF40_001293"
     CDS             15521..15655
                     /locus_tag="PXF40_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/trimethylamine N-oxide reductase
                     NapE/TorE"
                     /protein_id="HDL5802633.1"
                     /translation="MRSELLKTLLLSGLILPLLMAFAVGAYGFIVWMLQLFVIGLPGA
                     "
     gene            15659..16822
                     /gene="torC"
                     /locus_tag="PXF40_001294"
     CDS             15659..16822
                     /gene="torC"
                     /locus_tag="PXF40_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HDL5802634.1"
                     /translation="MLGSIKALFTRPATKIGLGVLVGIGFIAGAISWHQFNKAMDHTS
                     TEEFCVSCHSMQQPLEELKKTAHWSNKSGVTATCSSCHLPHDYTEKYARKVQASREAW
                     AELSGKYKEEGSFEKHRLEMAEREWARFAANGSKECKACHSYERMNFDKMGEAARKAM
                     KPAAEKDQSCMDCHKGIAHHLPKADENALKSKFDQFVNKSPNQGKSYYTKGNAELFLD
                     EGLSQAIGQLETAVPVAFVQAGKNADLVELTMWRKEKGFGRIWYHDFGKNITDAVLTK
                     EFMANQPKFEVLETKEDPITGLNWQKVKLQAWIGKAQLLDDVTPIWANAENQYKTQCS
                     TCHRQPDVAHFDSNSWIGLFNGMVGFTNMDKQTGKEVLRYLQMHASDSEEAKH"
     gene            16922..19387
                     /gene="torA"
                     /locus_tag="PXF40_001295"
     CDS             16922..19387
                     /gene="torA"
                     /locus_tag="PXF40_001295"
                     /EC_number="1.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
                     /protein_id="HDL5802635.1"
                     /translation="MQQSRRQFLKNMSVMAAAVTMPNFLVPRNVFASEDLSQWKVSGS
                     HWGAMRAKIENGRVAEIKPFEFDKHPTEMLNGIKGLIYSDSRIRYPMVRLDWLKNRHN
                     SNTAQRGDNRFVRVTWDEALDLFYQELERVQKEYGPWALHTANVGWRSTGQFHSCGNH
                     MIRAIAMHGNSVGTAGDYSTGAGQTILPYVLGSTEVYSQGTSWEIILKESENIIFWAS
                     DPVKNLQVGWNCETHEAYAYLEKLKEKVAAKGVNVICVDPVKSKTQNFLGCEQQYINP
                     QTDVPFMLALAHTLYTENLYDKKFLDMYTVGFEKFLPYLLGETEDKVAKTPEWAAEIC
                     GISADKIREFARMLAGKRTQFIFGWAIQRQQHGEQPYWMGAVLASMLGQIGLEGGGIS
                     YAHHYSSIGIPESGAAMPGAFPLNIDEGQTPKYDNKDYKGYSDTIPVARMTDSLLHAG
                     ETIDYNGKKVTYAPFKMAIFTGCNQWHRHSERNKMKQAFQKLETIVSINYSWTATCRF
                     SDIVLPACTPFERNDIDAYGSYSNRGVIAMHKLVDPLYDSRSDFEIFRDLCRRFGKEK
                     EYSRGMDEMQWVEKLYKDCRRENRGKFEMPEFAEFWQKGYVLFPEGKPWVRHADFRED
                     PELHALGTPSGFIEIYSNKIASFGYDDCKGHPMWFEKAERSHGGKNSDKFPYWLQSVH
                     PDKRLHSQLCESKELRETYSVQGREPLYINPQDAAKHGIQDGDLVRVFNDRGQAIVGA
                     VLSDNFPTGVVRLQEGAWYSPLDESVGAIDTYGDPNTMTLDIGTSKLAQAVSANTCLV
                     NIEKFIGNAPAPNGFNGAIEVTA"
     gene            19387..19977
                     /gene="torD"
                     /locus_tag="PXF40_001296"
     CDS             19387..19977
                     /gene="torD"
                     /locus_tag="PXF40_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HDL5802636.1"
                     /translation="MTLAISREERQFIYGWFNAMLARELSDEQLNALQAGEFDDFFAY
                     LSELGFAEQVAKFQAEVTACRQLEFPRLELAADFAQLFLLEGNLSAIPYASAYLSGEA
                     LAKNLAEMDRLLGEFGLQVNRETKEPSDHLCVYLTLFDRLLAEKPLETQQQFLQNQLM
                     SWLPAWFAKAKTVKTNTGVYPALLRLFEQVLLKEQR"
     gene            20117..20806
                     /locus_tag="PXF40_001297"
     CDS             20117..20806
                     /locus_tag="PXF40_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HDL5802637.1"
                     /translation="MQNNKTTYLNWYDLCVLTLILFGEAIYTSTQQYFITTEMQGNFE
                     ENLTFSNEQNYWALLTQLALLLIAMGYLKWRNFDFSRWVIRPSWLAFFSGIGLFILLS
                     LAMDLYFETLYGVYNLVYPEPFWAVLREVNISTVLYAILNGFYEEIFFLGICLAVKPE
                     YLKWAVIYSLIIRVSFHTYQGMESALGLGIWLGLIIYLLYSRSKQKNLFPFWVAHSIA
                     DILGLSLLAYF"
     gene            20964..21788
                     /locus_tag="PXF40_001298"
     CDS             20964..21788
                     /locus_tag="PXF40_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5802638.1"
                     /translation="MKSIKKLTLATLILVGLTACGSGGSGSSSNNAKSKPQVELKKTE
                     EDKKTEEDKKTEEDKKTEEDKKTEEDKKAEEAKKIAEAKGIGNKEYKDGLNELEEKNE
                     TGKNGEEIRTYGYLYNSHYSVVTAKMKQTLQENGRQMEPTVEVKGLKTENLPTEGKAT
                     YKGEAFDSHGNNSNSVVGGELIYNVDFSSRTGSGLVKNVQGGSIELAQGEIKNDSIIA
                     SAHQKYNDQAVGNGSYNIQFFGPNAEEIGGKIELNGEGEGSMKQMLGIAGTREEQK"
     gene            21837..23231
                     /locus_tag="PXF40_001299"
     CDS             21837..23231
                     /locus_tag="PXF40_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5802639.1"
                     /translation="MYKKHFLFLLVSPLVMAETVEFQQDPKEFDGQRQAVKFEQEIAK
                     KDLKLTAYLEEDNSLKGIEQHINQAILRQDWAKLERLLGDYAKQEQFDPLLLDYALAA
                     LAYAKKDYRSAAFYYQQLLKKQPDLTYPRFDLALILKEDYRYREAEQEFKQLKTDDLR
                     NAVNSALAQIEEEESWKPDFYLQYTQTNNVNNASSSPTVNVNGRIFIKESDSLPQSAK
                     GVRYGVGLSKMRNIGGNHFVGVDLGYNGVYYWNNHDYSEQSVSLTPKYSYRTATYRIG
                     VSPFIEQNWLGSSRYNYQFGSSINAVKLFERGLISGSFSHLQKRYSEQHIADRYNGYR
                     NQLTLGTQWQAVKNWRFFANLNASREITREKAQSSNKWLATIGVIYQTPSWASSVSVG
                     YGKRYFADKHYLFGYKRQDKEYQANVAVWNRSWHWQGIVPKLNFRYQKIDSNIADFYS
                     RSNKEVFMTLEKLF"
BASE COUNT         7019 a         4619 c         5263 g         6497 t
ORIGIN      
        1 ttaaagaacc taaaacattg ttgctttagg ttctttgttg ttactagttc attatattgc
       61 ttaagagtgt gttgtttcca aatcctccag atttagtcat tacagtgatg cctgagtagt
      121 tgcccttttc aatggagcat aaaggaacgc ccggtactac cgcatattgt acattcatct
      181 ctgttacatt catttgatct aataatgctg ctgcaccatc tccaccaaat aatataaggc
      241 tatcaaattt ttcattatca aggcagaatt tacttaaatc agctaaatgt tgagaaattt
      301 ctttagaagt ttccgtgata ttggcagatt ttgcatttac aacttttgca gggtttgccc
      361 gaataataac atgatctcta ctaaaacgta ttagagcgtt taattgtagt ttcagtgaat
      421 gttctgattg cgagtagtta atcaactgtg aaggcgaagg attaaataca atagattttc
      481 ctcctaaagt tgaaatatat tcatcaactt gcagttggct tgtttcgtga attgaggtta
      541 cgacaattaa tgctctacct aatttaagat ttcgctctgg ttgttgttga ttttggatat
      601 ttttcaactt ctgtgccaat ccggctgagc caacaggaat aattttatta cctatgtgat
      661 ttatgacttg ggcaatcatt gagagatctt cgtgcgtttt agcatcaata acgatctgtt
      721 tatattcact attttcaata gatgcctgca aattatcgac cgtatcacac gggattactt
      781 gagcatcagg caatagtttt tgcatagaag atgaatgcac agggcagata ggatcttttc
      841 ctgaagcagt ttcatttaca ggaacaccat taacatataa atgaccagct tctatagttc
      901 ttcccatttc tggatatgca ggacaaataa ttgctttaac atcgggatat aaaccagccc
      961 aagctttaat agcaccttca atctgatatt taacagagcc tctcattgtg gaatcaattt
     1021 taaggtaaat ttgcccgata ctattttgaa tagcattgct aattgcaatt tgagtcagct
     1081 cttttgcttt ctctccaatt gctcttgaat ctgtagaaac agaaattact tgggctttat
     1141 caggatgaat ttgggctaat gccgaaactt tagtttttaa gacagtgtca aatcctgatt
     1201 cagcaaacat aaccgcggta tcatttgcac cagtaaggtc atcagcaata actaagagtg
     1261 tctctttcat agattttctc cttttatagt gtcttgttct aagccacctt gacgttttaa
     1321 aacccacgct gcaaataatg gagctaagat tgctgaaact aatacagctg cggcaatctg
     1381 tgcagtcgca gtttgaacaa aaggtgctaa tgtagggtct gcttgagcaa caatttcagg
     1441 tgtaataatg gcatttccag cagtagttcc tgctgcaaac ccgattcctg attgattacc
     1501 acgtcttaaa attgttttgt aaccgataaa tacaagaaaa cctgtaaaga gagaagctac
     1561 gatacctaaa ataattcctg ttgctcctcc agtaataata gattgcagat tgattcctgt
     1621 tcctaatgca aaagcaaaga aaggaatgac tattgcacct gttggtttca ttaactctgt
     1681 ccatttagga tctaagttac caataaccat accaataata agaggaataa cagctgcaag
     1741 cattaatgaa agaggaatat ctgctaatcc tgatacacct aaaaatagta aaacaaagaa
     1801 aggtccatca ttaacagccg aagcgacata agctccttta tctctataat caccatattt
     1861 ccctgtaaac gctaaccaaa taccaccatt tgaatttgca acaacagtta gcatagctaa
     1921 taaagaaacg cccataacac catcattacc tacccataat cctaaaatca caactaaaag
     1981 agcgggaata atagttttaa atagtaatac aacaccggta tgggcaagta caggtccaga
     2041 acttctcacg gtaatttgca tacctgtagc gaaaattaat agtgcaataa gtggtcctgc
     2101 tgatgatttg aataaagccg tcgtaaatga acctaaattt aaaaattcag gaaagaatgt
     2161 accaataata gaaccaagaa ttagcggtat taccattgca ccgccaggaa ttttattcat
     2221 accatcatat atcgggacga tggatttaga tgtttgagta gacatattaa tctccttagt
     2281 gtgtcgcata tttgatattt gccatttttg cacccaaata gagtgcttca gtcatactac
     2341 gactatctgc tgttcctttg cctgctattg ggaaagcagt tccgtgatcg acagatgttc
     2401 gaataaatgg aagaccgaca gtaacgttta cacctgtatc aaagcctaat aatttgatag
     2461 ggatatgccc ttgatcgtga tacatcacaa caacaatatc gaattcattt aggttagctg
     2521 cacggtgaaa taaagtatcc ggagggacag gccctgtaac attaaaccct ttggcttgag
     2581 cctcttgaat tgcgggaaca atttcttttt gatcttcatc gccaaacatt ccattttcac
     2641 ctgaatgagg atttaaacca gcgactgcaa tacgaggttc tttaaaccca agaatgcgag
     2701 cattttcttc tgctaaatca ataactgtag caactcgttc tttggtaatt aaatcacagg
     2761 ctttacgaag ttggacgtga gtagtaacgt gaataacatt gagtttttca ctggttagca
     2821 tcattgagta atctttagta ttactgaggg ttgcaaggat ctctgtatgg ccaggaaatg
     2881 gtttaccacc tgcgtgtagg gcttctttat tcagtggtgc tgtaacaata gcgtggattt
     2941 ttcctcccat tgctaaatta actgcctctt caatatattc ataagctgct tttccagcac
     3001 gcggatcaac ttgagcaaaa ggcaaatctt caggcaggtt attcaaatct aaaatatcaa
     3061 taacgccata ttcggctaca aagttatcta gattattgag aattcttaat ttcaattctg
     3121 aatgaacaat aggtaaggct cgttgtataa tttttcgatc accgatcaca acagggtgtg
     3181 ctaactcata aatccgttga ttagctaatg ctttaataat aacttctggt ccgataccgg
     3241 cggcatctcc catcgtaatt cccaatatag gtttcatatt tactccttga ttgaaattaa
     3301 tcattttgaa cgaagtatag cttatatgaa atcataaaag tgtgataaac atcacaaaag
     3361 tgaacttttt taatcttatt gatttaattt aatcaatttt aaggtggtaa attggatagg
     3421 gtatgaaagt gaaaggcatt tattgctaga taaaagcttc ccttttcaat aaaaaagagt
     3481 atcatacgct ctcttaaacg taaccctaca tttaagtctg tttccaacct atcccaattt
     3541 ctttattcct taggggcata tagggtaaaa acaaaaaagc tgaaacgctt tttttaataa
     3601 gtagcgagtc aaatgcccca tggcatctat tcttttagga atagaaagct taggctttcc
     3661 gcaaggcacc cgacttattt ttttcacctc ttgtagaagg tttattttca atgacaatta
     3721 aaactcctat tcaagccgtt cttgcttcaa accaatattt tttagatcgc caagatgcaa
     3781 tggaatcaaa cgtgcgtagc tacccacgta aattaccttt tgcttaccaa aaagcacaag
     3841 gcgtttgggt aactgatgtt gaaggcaatg aatacctcga tttcctagca ggtgcaggaa
     3901 cgcttgcatt aggtcataac caccctaaat taatccaagc agttaaagat gtattagaca
     3961 gtggtttacc tttacactcg ttagatatta cgactccgtt aaaagatgct tttacggaag
     4021 aattactctc tttctttcca aaagataaat atatcctcca atttactggc ccgtctggtg
     4081 cagatgctaa cgaagcggca attaaattag ccaaaaccta cactggtcgt ggcaacgtaa
     4141 ttgctttctc cggtggtttc cacggaatga cccatggtgc gttatcgctc accggtaatt
     4201 taagtgcgaa aaatgcagta caaggcttaa tgccgggcgt acagtttatg ccttatccgc
     4261 acgaataccg ctgtccgttt ggcattggtg gcgaagccgg tgcaaaagca gttgaacatt
     4321 attttgagaa ctttattgaa gatgttgaaa gtggtgtggt aaaaccggca gcggtgatcc
     4381 ttgaagccat tcaaggtgaa ggcggtgtgg ttccggctcc aatcagcttc ttacaaaaag
     4441 tgcgtgaagt cactcaaaaa cacggcatct taatgattgt ggacgaagtt caagctggtt
     4501 tctgccgttc agggaaaatg tttgcctttg aacacgcagg cattgagccg gatatcgtag
     4561 taatgtcaaa agcgattggt ggtagcttac cgcttgcggt attagcgatc aaaaaagagt
     4621 ttgacgcttg gcaaccggca ggtcataccg gtacattccg tggtaaccaa ttagcaatgg
     4681 caaccggcta tgtatcgctt aaaattatgc gtgaagagaa tttagcgaaa aacgcacaag
     4741 agcgtggcga atacttaact aacgcattac gtgaattaag caaagaatta ccttgtattg
     4801 gcaatgtgcg tggtaaaggc ttaatgatgg gaattgatat tgttgatgaa cgtcagccaa
     4861 aagatgcaac aggtgcatac ccgcgtgatt gcgatttagc cgttgcaatt caaaaatact
     4921 gctttaaaaa caaattgtta ttagagcgtg gcggacgtgg cggtaatgtg gtgcgtgttc
     4981 tttgtgccgt gaatattacc caagcagaat gtgaagagtt tattaaacgc tttaaacaat
     5041 ctgttgctga agcagtgaaa gcggtgcgtg gttaatagtt agaatggtag gagcgaaaca
     5101 tttttcgccc taatgtaaaa aggggcgaat atttattcgc ccctacacca ataggataga
     5161 aataatgtca aacctagaaa aacacagaca atccctgttt tgtagcgatc caaaatcgat
     5221 tgcggattat gaatcggcaa tgaataacgc tgtgaaagcg gtttcagact ggctgaaaga
     5281 agaaaaaatg tacaccggtg gctcaattaa agagttgcgt gccaaaatca acggttttaa
     5341 cccaacccaa gctggtgtgg gcgtgcaaaa atcactggag catttggtgg aaattttctt
     5401 aaagccaagc ctcaaagttc accaccctca ttctttggcc cacttacatt gcccgacaat
     5461 ggtaaccagc caaattgcag aagtgttaat taatgccacc aaccaatcaa tggactcttg
     5521 ggatcaaagc ccggcaggtt cgattatgga agagcattta attgactggc tacgtcaaaa
     5581 agtcggctat ggcaaaggaa cttcaggagt ctttacctca ggtggtacgc aatcaaacct
     5641 gatgggcgta ttattggctc gtgactgggc gatagcgaac cattggaaaa aggcagacgg
     5701 ttcagagtgg tcggtgcaag ccgacggtat tcctgccgat gcaatgcaaa aagtgaaagt
     5761 ggtttgttcc gaaaacgctc acttctcggt gcagaaaaat atggcaatga tgggaatggg
     5821 tttccaatcg gtagtgactg taccgtcaaa tgccaatgca caaatggacg ttgaagctct
     5881 tgcgaaaacg ttggcggatt taaaagccga aggcaaaatt gtggcttgta tcgtcgcaac
     5941 cgcagggacg accgatgccg gtgcgattga tgatttaaaa gcgatccgta aattagccga
     6001 tgaacatcag gcttgggttc acgttgatgc tgcttggggt ggtgcattat tactgtcgaa
     6061 agatttccgc cacttcttag acggcattga attaaccgat tccattaccc ttgatttcca
     6121 caagcatttc ttccaatcaa tttcgtgtgg ggcattcttg ctaaaagatg aagcgaatta
     6181 ccgctttatt gattacaagg cagactacct gaattcagaa tatgacgaag aacacggcgt
     6241 gccgaattta gtgtcaaaat cattgcaaac tacccgccgt tttgatgcgt taaaattatg
     6301 gtttaccgtt gaagccttgg gtgaggagct atacgcttca atgatcgacc acggggttta
     6361 tctttctaaa gaagtggaag cctacattaa tgccaccgat ggcttggaaa tgttagtgcc
     6421 ggcacaattt gcctcagtct tattccgtgt cgtaccacaa ggttacccgg cagaatttgt
     6481 ggatacctta aaccaaaatg tggcagatga gttatttgct cgtggcgaag ctaacattgg
     6541 tgtgaccaaa gtcggtgagc atcaatcact gaaaatgact actttaagcc cgattgcaac
     6601 gcttgaaaac gtaagagcat tattagctca ggtgttggca gaagcagatc ggattaaaga
     6661 ttcgattgta aatggaactt atgttccgcc aattgattaa actgcgttaa aaataaaaag
     6721 gtgttttcga catttatttg tgttttaatg tttgcattcg gtagtcttta tcgaatgcaa
     6781 atttttttaa caaggagttt ttatgaaaaa agtcctgggt ttaacattga tggcaatggc
     6841 gttatcggcg tgtaattcaa ctgcttccaa cggttcttca caagcaaata caggtgttgc
     6901 accggcgaat gtgattagcg tgaaacaggt gttagcggca gcagatgaca gctacgtgac
     6961 ggtagaaggc acactcttaa acaaagtcgg tgacgaaact tacttattta aagatgcgac
     7021 agggcaaatc cgtgttgaga ttgacgatga agtatgggca ggtcagcacg ttggtagcga
     7081 aggcaataaa gtccgtttat acggagagat tgacaaaggt ttcaataaaa ccgagttaga
     7141 tgttaaaaca ctcactgttc tgtagaagat caaaccttaa tttggttccc cgccttgttt
     7201 ggcggggttt ttacgttaat taatcaaacc atccttttgc aaaaaaacgc aaaattatac
     7261 cgcttgttcc ttcaatattg tgctacaaga tgctgtgatt tgctgcaaaa tagcggtgta
     7321 atcagtctct tttaaaccaa tattaccgaa atagtgcatt tttacatcac gaatcccaca
     7381 gaactcaaac agcccttttc ccagcgtatg ttcaaatgct gctaaaaagc cttttcgttc
     7441 atatttttca ttggaattac cgagcgttac aaattgttgc atttttttgc cggtcagcaa
     7501 gccgatactt tcaatttccc cgttacgata ggcaaaatca taacttaaca ccctgtctaa
     7561 atagcctttt aaaattgccg gaaagcccat ccaccaaagc gggtaaatta acgtaatcac
     7621 atcagcttca agccaatatt gatgctcaat tgccacatct gcttcatagt gtttactgag
     7681 tgtgccttga aattccgccc agtctaatat cggcttgaag ttgagttggt agagatctcg
     7741 tacaaccacc ttatttggaa cggaagctgc tatcgttttt tccaaaatcg catggttaaa
     7801 gctggaggga ttcgggtgtg cgtaaataat caggtgattc atagcgtttt cctttactgt
     7861 gtcgaggcag ctactagaag attttagcga aactttcttt gatgaaaatc aatattttgg
     7921 cgaatatacc ggcaaatacc ccgtttgagg aatgaacggt tttaagtgaa cattagataa
     7981 tttagcctat tatagtgatg agtaaaaagg tgttttcttg actgattatc ctaatcaatc
     8041 acttcctcgc cgtagctttt tgcgagggca atttttagac tcgttaaaaa gccaaaaagt
     8101 cagtcagcaa gggtatgagc cgattcgtcc gccttgggct aatttagcaa attttttaga
     8161 aaaatgcacc gcttgcggta actgcattca ggcttgcgaa acccagatta ttgtaaaagg
     8221 tgctgcgggc taccctgaaa ttgattttag ccgtggtgaa tgcacttttt gtgaaaaatg
     8281 tgtgcattct tgcgaggcag aggtattccg agcagtttca gaacagcctt ggagccataa
     8341 aattgagatt caagccggct gtttattaaa gctcggaacg gaatgccgaa gctgtggcga
     8401 tagctgtgag atgagagtga ttcgtttccg cccgagttta ggtggcattg ccgaaatggt
     8461 attaaatttg gaaagctgta atggctgtgg ggcttgtttg agcgtttgtc cgacaagtgc
     8521 gataaaaatt cagccattac aaacacaggc aaacagagat gagtgaaaaa ttatccgaac
     8581 aggaaaactg gtatgtgtgc agtctcgtgg tgcaagcaaa accggaaaaa ttggaagaag
     8641 taaaagccga gattctgaag attcctcata ccgaaattca cggtgagaaa acagatgaag
     8701 gcaaattggt cgtgacgatt gaaagcaatg tgcatttagc cctttccgat cgaatcgatc
     8761 aagtaagaga tattaaaggc gtgattgtgg tgtctttaat ttctaattac attgatgaac
     8821 agtgattaat gattattttt gaagccaaac gtgggacata gttatggaac tcaatcgtag
     8881 agattttatg aaagcgaacg ccgctgtggc agctgctgca gccgcaggaa ttatgattcc
     8941 tgtgaaaaac gttcaggcag atgacaccgg tattcgttgg gataaagccc cttgtcgtta
     9001 ctgtggtaca ggttgtagcg tgctagtcgg tactaaagac ggtaaagtag tggcaaccca
     9061 aggtgacccg gatgcagaag taaaccgtgg tttaaactgt attaaaggtt atttcttatc
     9121 caaaatgatg tacggtgcag accgtatgca agagccaatg ttgcgtatga aagacggtaa
     9181 gttcgacaag aacggcgatt tcacgccggt ttcttgggat caagccttta gcattatggc
     9241 ggagaagatt aaaaccacta ttaaaaatga cggcccgaat gctgtaggta tgttctcatc
     9301 aggtcaaaca accatttttg aaggttatgc gaaagtgaaa ctttggaaag gtggtttccg
     9361 ttcaaatacg attgacccga atgcccgcca ctgtatggcg tccgctgcgg ttgcctttat
     9421 gcgtaccttt ggtatggacg agccgatggg ctgctataac gacatcgaaa aaaccgatgc
     9481 gttcgtgctt tggggttcaa atatggcaga aatgcacccg attttatggt ctcgtatttc
     9541 tgatcgccgt ttatcagaca ataaagtgaa agtggtggta atgtccactt acgaacaccg
     9601 ttcgtttgaa ttagccgata caccgattat cttcaaacca cactcagatt tagcaatttt
     9661 aaactacatt gcgaactaca ttatccaaaa cgataaagta aattgggatt ttgttaacaa
     9721 acacaccaaa tttaaacggg gtgaaaccaa tatcggttac ggtttacgtc ctgaacacaa
     9781 attacaacaa aataccaatg cgaaaactgc cggtaaaatg tatgacagcg attttgaaga
     9841 gtttaagaaa atcgttgccc cttatacatt agaagaagct caccgtattt caggcgtgcc
     9901 gaaagatcag cttgaaacat tagcgaaatt atatgcagat cctaaccaaa aattagtgtc
     9961 gttctggacg atgggcttta accaacatac ccgtggtgtg tgggtaaacc atatgatgta
    10021 caacgtccat ttattaaccg gtaagatcgc attagaaggt tgtgggccgt tctcactcac
    10081 gggtcagccg tccgcttgtg gtactgcccg tgaagtgggt acatttattc accgcttacc
    10141 ggcagatatg gtggtcacaa atccgaaaca ccgtgagatt gtagagaatt cttggaaatt
    10201 accggctgga gcaattcctg atgtaccggg ctttcacgct acagctcaaa gccgtgcctt
    10261 aaaagacggc aaaatgaaat tcttatggca gatgtgtacc aacaatatgc agggcggccc
    10321 gaatatcaat gaagagatct tcccgggctg gcgtaatcct gaaaccttta ttgtggtttc
    10381 agatccgtac ccatctgttt cagcagtggc tgctgactta attcttccaa cctgtatgtg
    10441 ggtggaaaaa gaaggggctt acggtaacgc agaacgccgt acccaattct ggcgtcagca
    10501 agttaaaggg ccggcaaatg cccgttcaga tacttggcag ttagtagagt tctctaaata
    10561 cttcaaagta gaagaagtat ggccggaaga gttattagct aaagcaccgg aattgcgtgg
    10621 taaaactcta tacgaaatcc tttaccgcaa cggcaaagta gatagctacc aagtgccaac
    10681 taacattccg ggctatatga atgacgaagc agatcacttc ggttactaca ttcaaaaagg
    10741 cttatttgaa gagtatgcgg aatttggccg tggtcacggt cacgatttag ccgactttga
    10801 cacctaccac aaagtacgtg gcttacgttg gccggtggta aaagacgaga aaaccggcga
    10861 atacaaagaa actttatggc gttaccgtga aggctatgac ccatacgtta aagccggtga
    10921 agaagtggca ttctatggca atgcggacaa aaaagcagtg attttaggtg tgccatacga
    10981 accacctgcg gaagcaccgg acgaagaata tgacttatgg ttctgtaccg gtcgtgtact
    11041 agaacattgg cacaccggta cgatgacccg ccgtgtgccg gagttacata aagcattccc
    11101 aaccaacttg gtttggatgc acccgaatga tgcgaaaaaa cgaggcttac gtcacggtga
    11161 taaagtgaaa gtgatttcac gccgtggtga atatgtatcg aacttagata cccgtggacg
    11221 taataaatgt ccggaaggtt tgatttactc gactttcttc gatgccggtc agttaatcaa
    11281 caaagtgaca cttgatgcga ctgatccaat ttcatttgaa accgacttca aaaaatgtgc
    11341 ggttaaagtg gtgaaagctt aattgtaggg gcaaattatt tgcctcagac aagcggtcaa
    11401 atttgcaaat ttttttacaa aaacgaccgc ttacctaaga ggaacccaca atgaaaatgg
    11461 atccaaatcg tcgccagttt ttaaaaaatg caacccgtac cgcagccggt gtttgcggtg
    11521 taggaatgat tttagggcta cagcaacaac aaagttttgc ccgtcaaggg gtagcactac
    11581 gcccaccggg tgcattgccg gagcaagatt tcctgagtgc ttgcacccgt tgcggacaat
    11641 gtgtgcaggc ttgtccttac gatatgttgc atttggcatc gcttatttca ccagtggaag
    11701 ccggcacgcc atactttatt gcacgggata aaccttgcga aatgtgcttg gatattccct
    11761 gtatgaatgc ttgcccaacc ggggcattaa gcgaagagct aaaagacatt gacgatgcac
    11821 gaatggggct tgcggtgttg ctcgaccacg aaacttgtct taactggcaa ggcttgcgtt
    11881 gtgacgtgtg ttaccgtgtt tgtccgttaa tcgacaaagc gattactctt gagaaagtgc
    11941 ataacgaccg tacctcgatt cacgccaaac tgattccgac cgtgcattct gatgcttgca
    12001 ccggttgcgg taaatgtgaa caggcttgcg tattggaaga ggcagcgatc aaagtgttac
    12061 cgatggattt agccaaaggc ttgctcggtc gtcactatcg tttaggctgg caagagaaac
    12121 aaaatgccgg taaatcgctg attgaagatg ttcacccaga gggtttacgc ccagcttatg
    12181 atgccagaat gccggaaggc ttacacgagc cggtgtatca gcatatggaa gtaaaacctg
    12241 atgtgaaagt ggctacgcca agtcgggcga cacaaaacta tgtgccgaac tctacgacgg
    12301 tggaagctcc ggagcatttc cctgatttag acttgaatct caagggggtg aaataatggc
    12361 agccaattct ccaaaaaatg cgggcttaga ggctcgtcag aaactaggtt ggtggcacgc
    12421 ttaccgcttt ttgattttaa gacgcttaag ccaactcagc attattttga tgtttttaag
    12481 cggcccactt tggaatgtct ggattttaaa aggaaactac agcggtagct tattactaga
    12541 taccgtgccg atgacagacc cattaatgac cgctgaagtg ctggcaaccg gctatcgccc
    12601 tgaatggacg gtattggttg gggcgttaat tatggtggcg ttttacggca ttgtcggcag
    12661 caagctgttt tgtagttggg tctgcccgat gaatatggta acagatactg ctgcttggtt
    12721 aagacgcaaa ctcggtattc gccaaactgc taaaattcca cgcaatttac gctatgtgat
    12781 tttggcggtg attttagtcg gtagtgcgat ttccggaaca ctattgtggg agtggatcaa
    12841 cccggttgcg gctctcggtc gggtgtttgt attcggttta ggggcaacgc tttggctggt
    12901 tttagtggtg ttcttgtttg acttattggt ggcagaacat ggctggtgtg gtcatctttg
    12961 cccgattggt gcaacgtatg ccttaattgg ggcgaaaagc ctgattaaag tcaaagtggt
    13021 agatcgtaac cgttgcgata attgtatgga ttgttacaac gtttgtccgg aacctcaagt
    13081 gttgcgtgtg ccgctacacg gtaaaccgga ggaaagcacg gttatcttat ctaaagattg
    13141 cattacctgc ggacgttgta ttgacgtttg tgccgaaaat gtatttgcct tcggaatgcg
    13201 ttttcaaggc agtattgatg tgaaaaatat ttaattttta tctttttgaa aacaagaatt
    13261 ttaatggagt gaacctcaaa tgagaaaata tctcgccttc attttagccg tgatgtccgg
    13321 ctttgcaatg gcggaagccc ctaagttatc cggatcaatt gatgagacaa ccgaaagtgt
    13381 tgcaccggga tttcataacc cacaaaaaga tgtgggcacg attccaacca ctttcccttt
    13441 ccaaccaccg cttgttccac atagtattcg tggcttacaa gtgagcaaaa acgtaaacca
    13501 ttgtttaggt tgccacgcta ttgaaccatc taaaaccaca ggtgcgaccc gtttaccgcc
    13561 aagccatttt accgaccgtg atggcaaggt gtacgaaaac gaatctcctc gtcgttattt
    13621 ctgtttgcaa tgccacgtgc aacaaactga tgtaaacccg attattcaaa ataaatttga
    13681 atctgtacgt gaatctcaag ctaaataagg agtaagtaat gttgagaaga ttttgtaact
    13741 ggttacgtag cccaagcaaa atggcaattg gtgctgtaat ccttatttct gcattaggtg
    13801 gtattttcgc ttggagtggt tttaatgcag ggttagcaat gacaaatact gaagagtttt
    13861 gttcagattg ccatatgaac gatgttgtgc cggaataccg tgcctctgct cactattcaa
    13921 accgcagcgg tgtgaaagcg atttgttcag attgccacgt accgcacgaa ttctttccaa
    13981 aatggcaacg taaaatcata gccgcaaaag aagtttatgc acactttacc ggtaaagtag
    14041 ataccaaaga gaaatttgaa gctcatcgtg gcgaaatggc agaacgtgaa tgggcacgta
    14101 tgaaagcgaa cagctctcaa gagtgccgta actgtcataa ttttgatgat atggacttca
    14161 ctcaacaaaa aaacattgcg cagcaaatgc acgcattggc acaagagcaa ggtaaaacct
    14221 gtattgactg ccacaaaggg attgcacaca atctcccaca tatggaagcg atccagaaaa
    14281 actttatccc tgatgatttg ctgaaaaaag cagaagagaa gaaataactt aacgtgtttc
    14341 aatagaaaac cctcaatttc cattgagggt ttctttttag tagccaagtt agtaaccaat
    14401 ggcattgaca tttggtaaaa aatcgttgga atttaaccgc ttgacgaccg tttctatcgt
    14461 gccgttttcg tgcaattcaa tttcacgcca gccttgtggt tgtaagtcta aggtaaactg
    14521 gtcgcaattc ggcttaaatt gaatgcaagt agatggggtg gcataaatcg gaataccatg
    14581 ccaaatatca tcaacctgct gatgaatatg accatgcaca atcgctttta cattcttaaa
    14641 ttttgcgaaa atctcggata attcattgct gttttttaag ctatgctgat ccagccacgc
    14701 tgagtttgtc ggcaaaatat tgtggtgcag agcaaccaag gtaaaccgtt gcggatattg
    14761 tgccaatttt tcttctaacc atttaagctg tgagtaagag agttcgccat aaggcatacc
    14821 taccacctgg gtatttagca tcagaagctg ccattgctca ccgagtaaaa tttgtttatg
    14881 gggaaggata tgtttatatt gcgccaaaat ttctgacata ctcggctgaa catcgtgatt
    14941 cccctctagc cacactatcg gcgagtttag cgaattagtt atctgtgcaa aatagtgata
    15001 accagcaata ttgttatctt gaatcaaatc acctgtggca agaactagat caaaatattg
    15061 cttcgcttgt ttgtttattt gctcaataac tgccgaaaaa ctttttactg ttttgacatt
    15121 aagtagagtt tcctccggat tggagaaaag gtgagggtca gttatttgta ataacttaat
    15181 tacccctgtt acgggtaact taatatattc gtgcattcgt tttgcatcca ttcaaattct
    15241 agtaattttt aactggtgag attctatcag taagctaaaa gtaaaaatgt ggactatgcc
    15301 gcatttttga aaaaaagtga gattaatcaa aaaaaattta ttattttcga tagctaagac
    15361 aatggtaagt ttgattaata ctttcatatt gtaatagatg atttttatac tgtttggctg
    15421 tttctagaac aacttcttta tatttttgat tgatatcaag gcaaattgtt tctgaagata
    15481 aaataattaa cacttattag ttaataaaaa aggagttgaa atgcgttcag aactattaaa
    15541 aacgcttttg ctatcagggc tgattttacc gctattgatg gcgtttgccg taggagctta
    15601 cggctttatt gtgtggatgt tacaactgtt tgttattggt ttaccgggag cgtagaaaat
    15661 gttaggttca atcaaagcat tatttactcg gcctgcaacc aaaatcgggt tgggagtgtt
    15721 agttggtatc ggttttattg ccggagcaat tagctggcat caatttaata aagcgatgga
    15781 tcataccagc actgaagagt tttgcgtgag ttgccactca atgcagcagc cgttagagga
    15841 gcttaaaaaa accgcccact ggtcgaataa aagcggggta acggcaacct gttcaagctg
    15901 ccacttaccg cacgattata ccgaaaaata tgcccgcaaa gtgcaggcaa gccgtgaggc
    15961 gtgggcagaa ttatccggca aatataaaga agaaggctca tttgaaaaac accgcttaga
    16021 aatggcagag cgtgagtggg caagatttgc cgccaatggt tcaaaagagt gtaaggcttg
    16081 ccacagctat gagcgaatga attttgataa aatgggcgaa gcagctcgta aggcaatgaa
    16141 accggctgcg gagaaagatc aaagttgtat ggattgccac aaaggcattg ctcaccactt
    16201 accgaaagcc gatgaaaatg cactgaaatc gaagtttgat cagtttgtga ataaatcccc
    16261 aaaccaaggc aaatcttact acaccaaagg gaatgccgaa ttatttctag acgaaggttt
    16321 aagccaagct atcgggcaat tagaaaccgc cgtgccggtg gcatttgtgc aagcgggcaa
    16381 aaatgcggat ttggttgagc tgacaatgtg gcgtaaagag aaaggtttcg gtcgcatttg
    16441 gtatcacgat ttcgggaaaa acattaccga tgcggttcta accaaagagt ttatggcaaa
    16501 tcagccgaaa tttgaggtgt tggaaaccaa agaagatccg attaccggct tgaattggca
    16561 aaaagtgaaa ctacaagcgt ggattggcaa agctcaatta ttagacgatg ttaccccaat
    16621 ctgggcgaat gcagaaaacc aatacaaaac ccaatgtagc acttgccaca gacagcctga
    16681 tgtcgcccac ttcgattcca acagctggat cggcttattc aacggaatgg tcggctttac
    16741 caatatggat aaacagaccg gcaaagaggt gctacgttat ttacaaatgc acgcctccga
    16801 tagtgaagaa gcgaagcatt aataatatta ctcccctctt tactaaagag gggaattaat
    16861 cgagcgttga ataacattct ctgtactagc tcacgttttt acaaataaag aaggacaaga
    16921 tatgcaacaa tctcgccgtc aatttttaaa aaatatgtct gtgatggctg ccgctgtcac
    16981 aatgccgaat ttcctcgtgc ctcgcaatgt gtttgcgagt gaagacctca gtcaatggaa
    17041 agtttccggc tctcactggg gggcaatgcg tgccaaaatt gagaacggac gagtggcaga
    17101 aatcaaaccg ttcgagtttg ataaacaccc gaccgaaatg ctcaacggca ttaaaggctt
    17161 aatttacagc gattcccgta tccgctaccc gatggtgcgt ttagattggc tcaaaaaccg
    17221 ccataacagc aacaccgcac agcgtggcga taaccgcttt gtgcgggtaa cgtgggacga
    17281 agccctcgac ctgttctacc aagagttaga acgggtacaa aaagagtacg gcccgtgggc
    17341 gttacacacc gccaatgtgg gctggcgttc aaccggtcaa ttccacagtt gcggtaacca
    17401 tatgatccga gcgattgcga tgcacggtaa cagtgtcggc acggcaggcg actattctac
    17461 cggtgcaggg cagaccattc tgccgtatgt gctgggttca accgaagtct attcgcaggg
    17521 cacgtcttgg gaaatcatct taaaagagag cgaaaacatc attttctggg caagcgaccc
    17581 ggtgaagaac ctgcaagtgg gttggaactg cgaaacccac gaagcctatg cctacttgga
    17641 aaaactgaaa gagaaagtgg cagcaaaagg cgtgaatgtg atctgtgttg atccggtgaa
    17701 aagcaaaacc cagaatttct taggttgcga acagcagtac atcaatccac aaaccgatgt
    17761 gccgtttatg ttggcacttg cccacacgct ctacaccgag aacctgtacg acaaaaaatt
    17821 cttggatatg tacacggtcg gctttgaaaa attcctgccg tatctgttag gcgaaaccga
    17881 agacaaagtg gcgaaaaccc cggaatgggc ggctgaaatt tgtggtattt ccgccgacaa
    17941 aatccgtgaa tttgcccgaa tgcttgccgg caaacgcacc caatttattt tcggctgggc
    18001 aattcaacgc caacaacacg gcgaacaacc gtactggatg ggagcggtgc tagcctcaat
    18061 gttagggcaa atcggcttgg aaggcggcgg catcagctat gctcaccatt acagctctat
    18121 cggtattcct gaatccggtg cggcaatgcc gggggcgttc ccgctcaata ttgatgaggg
    18181 gcaaaccccg aaatacgaca acaaagatta caaaggctac agcgacacca ttccggtggc
    18241 tcgtatgacc gacagcttgc tccacgccgg cgaaaccatt gattacaacg gcaaaaaagt
    18301 gacttacgct ccgttcaaaa tggcgatttt caccggctgt aaccaatggc accgccattc
    18361 cgagcggaac aaaatgaaac aggcgttcca aaaactggaa accattgttt cgatcaacta
    18421 cagttggacg gcaacctgcc gcttctccga catcgtgctg ccggcctgta ccccatttga
    18481 acgcaacgat attgacgcct acggctcata cagcaaccgt ggcgtgattg caatgcacaa
    18541 gctggttgat ccactctacg actctcgctc cgactttgag attttccgag atctctgccg
    18601 ccgtttcggt aaagagaaag agtacagccg tggaatggac gaaatgcagt gggtagaaaa
    18661 actctacaaa gattgtcgcc gtgaaaacag aggtaaattt gaaatgccgg agtttgctga
    18721 attttggcaa aaaggctatg tgctgttccc agagggcaaa ccttgggttc gccacgccga
    18781 tttccgtgaa gatccggaat tgcacgcact tggcacaccg tccggcttta tcgaaattta
    18841 cagcaacaaa atcgcctctt tcggctatga cgattgcaaa ggtcacccaa tgtggtttga
    18901 gaaagccgaa cgttcacacg gcggtaaaaa ttccgacaaa ttcccgtact ggttgcaatc
    18961 agttcacccg gacaaacgct tacactctca actttgtgaa tcgaaagaac tgcgtgaaac
    19021 ttacagcgtg caagggcgtg aaccgcttta cattaaccca caagatgccg ccaaacacgg
    19081 cattcaagac ggagatttag tgcgagtgtt taacgaccgt gggcaagcga ttgtgggggc
    19141 ggtgctttcc gacaacttcc cgaccggcgt agtgcgttta caagaagggg cttggtattc
    19201 accccttgac gaaagcgtgg gggcgattga cacctatggc gacccgaaca caatgaccct
    19261 cgacatcggc acgtccaagt tggcacaagc ggtttccgcc aacacttgct tggtgaacat
    19321 cgagaaattt atcggcaatg ccccggctcc gaatggcttt aacggtgcga ttgaggtaac
    19381 ggcttaatga cgttggcaat cagtcgtgaa gaacggcaat ttatctatgg ctggtttaac
    19441 gcaatgctcg cccgagaact ttcggacgag cagttaaatg ccttacaagc gggcgaattt
    19501 gacgattttt ttgcatacct cagcgaattg ggttttgccg aacaggttgc aaaatttcaa
    19561 gcagaagtga ccgcttgtag gcagctggaa tttcctcgtc tagaactggc ggctgacttt
    19621 gcccaactgt ttttattgga aggcaatctc agtgccattc cttacgcctc cgcctattta
    19681 agcggcgaag cgttagcgaa aaatttggcg gaaatggaca gactgctggg cgaatttggg
    19741 ctgcaagtta atcgagaaac caaagagccg agcgatcacc tttgcgttta tctcaccctt
    19801 tttgaccgct tgcttgctga aaaaccgttg gaaacgcaac agcaatttct gcaaaaccaa
    19861 ctgatgagct ggctccctgc gtggttcgcc aaagccaaaa ccgtcaaaac taacaccggc
    19921 gtttatccgg cgttgctaag gttgtttgaa caggtgttgc tgaaggaaca aagataaagt
    19981 tatttatttg agaatgattt gtattgagcg aattgagaaa ggaagttaaa atttcaactt
    20041 ccttttttat tggctggatt tatccacatt attacaagcg gttattttta taaaaaaatt
    20101 tacaaaggag acattaatgc aaaataataa aaccacctac ctaaattggt acgatttatg
    20161 cgtgctaacc ctgatcctgt ttggtgaggc aatttatacc tcaacccagc aatatttcat
    20221 caccaccgaa atgcaaggta attttgaaga aaatttaacc ttttcaaatg aacaaaatta
    20281 ttgggcatta ctgacgcaac ttgcattgtt gctgattgca atgggctatc taaaatggcg
    20341 gaattttgat ttcagccgtt gggtgattcg tccctcttgg ctggcttttt ttagcggtat
    20401 cgggttgttt atcttgctct cgttagcgat ggatctctat tttgaaacat tatatggtgt
    20461 ttacaaccta gtgtatccgg agccattttg ggcagtattg agagaagtga atatttctac
    20521 cgtgctgtat gcgattttaa acggctttta tgaagaaatc tttttcctcg gtatttgctt
    20581 ggcggttaaa cctgaatatt taaaatgggc ggtgatttat tcactgatta ttcgggtgag
    20641 ttttcatacc tatcaaggaa tggaaagtgc gttaggatta ggaatttggc tcggtttaat
    20701 tatttatttg ctctactcac gctcaaagca gaaaaaccta tttccatttt gggtggcaca
    20761 cagtattgcg gatattttgg ggctgagttt gttggcttat ttttagttaa aggtgctaca
    20821 tttaagcggc ataagttgat agagctgatc gtaccagtag cataaaaaca ttattatttg
    20881 tatggaaagg tgcttttagg ttacaatata accgatagtt attggttata actaaaaatt
    20941 atttttaatt taacggagca aatatgaaga gtatcaaaaa attaacccta gccactttga
    21001 ttttagtggg tttaactgct tgtggtagcg gtggttcagg tagcagttct aataatgcta
    21061 aatcgaaacc acaagttgag ttaaaaaaaa ctgaagagga taaaaaaact gaagaggata
    21121 aaaaaactga agaggataaa aaaactgaag aggataaaaa aactgaagag gataaaaagg
    21181 ctgaagaagc aaaaaaaatt gcagaggcaa aaggaattgg caataaagaa tataaagatg
    21241 gattaaatga gttagaagaa aaaaatgaaa caggtaaaaa cggagaagag attcgaacct
    21301 atggttatct ctataacagc cattattccg ttgtaactgc caaaatgaaa caaactttac
    21361 aggaaaatgg tcgtcaaatg gaacctacgg ttgaagtgaa agggcttaaa actgagaatt
    21421 taccgacaga gggcaaagca acatataaag gagaagcctt tgattctcac ggtaataaca
    21481 gcaattcagt agtaggtgga gaattaatct ataatgttga tttctctagt cgtaccggat
    21541 caggtctagt taaaaatgta cagggcggtt ctatcgagtt agcacaaggc gaaataaaaa
    21601 atgatagtat tatagcttct gctcaccaaa agtataatga tcaggctgtt ggaaatggta
    21661 gttacaatat ccaattcttt ggtccaaatg cagaagaaat tggagggaaa attgagctta
    21721 atggtgaggg cgaaggctca atgaagcaga tgttaggtat tgcaggaacc cgagaagaac
    21781 aaaaataaca tttaataccc aatgccgttt aatcttaaac ggcattcttt tttactatgt
    21841 ataaaaaaca ttttctattt ttacttgttt cgcctttagt aatggcggaa acggttgagt
    21901 ttcagcaaga tcccaaagag tttgatgggc agcgacaagc ggttaaattt gagcaagaaa
    21961 ttgcaaaaaa ggatttaaaa ttaaccgctt acttggagga agataattct cttaaaggta
    22021 ttgaacagca cattaaccaa gcgattctta gacaagattg ggcgaagctg gaaaggctgc
    22081 ttggcgatta tgcaaagcaa gagcaatttg atccgctact tttagactat gctttggcgg
    22141 cattggctta tgctaaaaaa gattatcgct ctgcggcgtt ttattatcag cagttgctga
    22201 aaaaacagcc tgatttaacc taccctcgtt ttgatttggc tctgatttta aaagaggatt
    22261 atcgctacag ggaagcagag caagaattta agcaactcaa aaccgatgat ttacgcaatg
    22321 cggtgaacag tgcgttggct caaatagagg aggaagagag ctggaagccg gatttttatt
    22381 tgcaatatac tcaaaccaac aatgtgaata atgcttcttc gtcgccaacg gtaaatgtaa
    22441 acgggcggat ttttattaaa gaatcagaca gcttgccgca gtcggcaaaa ggcgtaagat
    22501 atggcgttgg cttgagtaaa atgcgaaata tcggcggtaa tcattttgtg ggagtcgatc
    22561 ttggctataa cggcgtttat tactggaata accacgatta tagcgaacag tcggtctcac
    22621 taacaccaaa atatagctac agaacggcaa cttatcgtat cggggtttcg ccctttattg
    22681 agcagaattg gctgggtagc tcacggtata actatcaatt tggtagcagt atcaatgctg
    22741 ttaaactttt tgaacgaggg ctgatttccg gctcattcag ccatctgcaa aaacgttata
    22801 gtgaacagca tattgccgac cgttacaatg gttatcgcaa ccaactcacg ctaggtacgc
    22861 aatggcaagc ggtcaaaaat tggcgatttt ttgcaaatct taacgctagc cgtgaaatta
    22921 cccgtgagaa agctcaatct tccaataagt ggctggcgac cattggcgta atttaccaaa
    22981 ccccaagctg ggcaagttcg gtaagtgtcg gatatggcaa gcgttatttt gctgataaac
    23041 attatctgtt tggctataaa cgccaagata aggaatatca agcgaatgtg gcggtgtgga
    23101 atcgaagttg gcactggcaa gggattgtgc cgaaattgaa tttccgttat caaaaaatcg
    23161 atagcaatat tgccgatttc tactctcgta gcaataaaga agtctttatg accttagaga
    23221 aactatttta aggctgtgta tgaatgtcgg ggagaaaaat tttctccccg atatttatgt
    23281 gtagaagatc agacttgatc tgacaattca ctctaaaaag tgagagtttc ccgtttagaa
    23341 tatgagtgtc aaaaatcaat ctaaacaaaa aggaaactct catgttttat tctaacaa
//
LOCUS       DANMCL010000038        23351 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.038, whole genome shotgun sequence.
ACCESSION   DANMCL010000038 DANMCL010000000
VERSION     DANMCL010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 23351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23351
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.038"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            15..242
                     /locus_tag="PXF40_001300"
     CDS             15..242
                     /locus_tag="PXF40_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL5802640.1"
                     /translation="MILEIINALGNKENIKQVEACLTRLRVVLHNNGLLNKSALKKLG
                     AVDVIKVGDTQQIIFGAKAGQYRDEINALIG"
     gene            complement(286..1110)
                     /locus_tag="PXF40_001301"
     CDS             complement(286..1110)
                     /locus_tag="PXF40_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HDL5802641.1"
                     /translation="MNGPTQLAHFQEQIRKEYDGLSKRLKQVAQYVLDNGNSVVFDTV
                     STIAERADVPPSTLIRFANAFGFSGFNEIKQLYRQDMMEGTSRYTERVQLFRQIEPLD
                     EQNSELNHILDVFVQGNTQALQQLSTQVSEEQLAQTVDILHNAKRIFIVGLKRSFSIA
                     NYLNYALHHLDYDVFMIDGSGGMFDEQLSRIREGDAVIAVSFSPYANETLNVVTATAR
                     PGVKHIAITDSQLSPLLSFSDVSFIIKEAQVSGFRSQCATMTLAQTIAVSLALKKA"
     gene            complement(1248..2588)
                     /locus_tag="PXF40_001302"
     CDS             complement(1248..2588)
                     /locus_tag="PXF40_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HDL5802642.1"
                     /translation="MSVSQRFIDFMNAHVAPVARRMENQPHISAIRDGFIVVLPFLIV
                     GSFIMILLIPPFDENTQNAFGQAWWRFANWASPYGWNFFQMSFNAISLFTSASIAYNL
                     AKAYKREPLPAAFLSVMAFLLVAAPVKDGMMDIKFFGGIGLFSAIFIAIYSVEMTRLL
                     EFLKIKIRLPKEVPHAVAESLNIVIPILAILLTLYPFAIWVESATGRNIPQLIMDFMA
                     PLIAVSDSLGAICLFVIATHLLWFLGINGSLVLMQLWTPFLLQNMAANLAAFQAGEPL
                     PFIITNSFWDFYIVHGASGGVIALAFLLVRSKSAHLRSIGKIGLVPSFFSIGEPIVYG
                     VPMVVNPLFFIPLIFAPLANAVIAYLILDFNLIHRVYLMAPWTTPAPIGAYLVSAGDI
                     WAPILSIALIILDIVIYYPFFKMYEKVCVEKEKAQNLDEKAQQELLEKARMAAQ"
     gene            complement(2591..3931)
                     /locus_tag="PXF40_001303"
     CDS             complement(2591..3931)
                     /locus_tag="PXF40_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HDL5802643.1"
                     /translation="MSCNTSPKRFHASWESIKQHQVPEWYEDAKFGIFIHWGIYSVPA
                     FAPPTCQLGEIDIDEQWFCNNPYAEWYFNSINVKKGPTYEHHIKTYGESFAYNDFLPL
                     WKAEKWQPAEWAKLFAKAGAKYVVLTTKHHDGFCLYPSKYTDFNCMQAGPKRDLMGEL
                     TENVREQGLKMGAYYSGIIDWTYSSAPIFTESQNFSNACPTYEYADYAYKQVVELIDR
                     YKPDVLWNDIGWPKVGEHMLPHLFAHYYNSVQEGVVDDRWNKLWCDFTSKEYKHGVAS
                     RDKKWEMCRGMGLSFGYNQVEDESHLISVKDLISLLVETVADNGNLLLNIGPKADGTI
                     PQEQVERLLALGSWLEINGEGIYKSRCSQHQTEQIGDVTYRYTKVGADLYLYIDGLTE
                     AQISLPLSVYGELQALNTELKFTIENTAQGRVLHIQNYQPDWYVLGFKIADGEK"
     gene            complement(4220..6136)
                     /gene="iolC"
                     /locus_tag="PXF40_001304"
     CDS             complement(4220..6136)
                     /gene="iolC"
                     /locus_tag="PXF40_001304"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HDL5802644.1"
                     /translation="MATVNHQDRPLDLICLGRVAVDFYGQQIGSRLEEMTTFSKYLGG
                     SSGNVAYGTAVQGLRSSMLARVGDEHMGRFLREELQSVGVDTSHLITDKERLTALVIL
                     GIKDKETFPLIFYRDNCADMAITKDDFSEAYIASSRCLAITGTHLSNPKTREAVLTAL
                     EYAGRNEVKRALDIDYRPVLWGLTSLGDGETRYIDSAEVTKSLQEVLHHFDLIVGTEE
                     EFHIAGGSTDTLTALKNVRKVSNAVLVCKRGALGCSVFEGELPNDLDGGLNVYGVRVE
                     VLNVLGAGDAFMSGLLRGYLNNEGWEQACHYANACGALVVSRHGCSPAMPTKRELDDY
                     LTRAESVPRPDLDERLNHLHRVTTRKKQWENLCIFAFDHRKQLVDMANKVGADLARIP
                     KLKQLLLKAMEQTATQSGLPQNQAGILADTTFGQDVLNEITGKDYWIARPIEEPSSRP
                     LELEYGDLGSQLASFPRDHVIKCLAFYHPNDESGLKARQDRKLKEVYQACCRTGHELL
                     LEIILPADMPQSEAFYNQAIAHFYQLGIKPEWWKLPDVSRAQWQAISATIEANDPDCR
                     GILILGLDAPLEVFKDTFEQAKGCEKVKGFAVGRTIFGEPSEKWLAGELDDNTLISAV
                     SEKYRTLIDLWQQR"
     gene            6404..8338
                     /gene="iolD"
                     /locus_tag="PXF40_001305"
     CDS             6404..8338
                     /gene="iolD"
                     /locus_tag="PXF40_001305"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HDL5802645.1"
                     /translation="MQTTRLTVAQALVQFLDNQYLDVDGKEIKFVHGVAAIFGHGNVL
                     GIGQALAQNAGGLTLYQGRNEQGMAHLAMGFAKQNLRQRIIACTSSVGPGAANMVTAA
                     ATATANRIPLLLLPGDVFATRQPDPVLQQIEQPYDLSISTNDAFRAVSKYWDRVQRPE
                     QLMSACINAFRVLTDPAETGAVTIALPQDVQAESFDFPNSFLQKRVHRLERTPPTTAM
                     IKQAVTLIQTKKKPLIVCGGGVRYSQAGQILQKFAKQFGIPFAETQAGKSAVVSDHAL
                     NVGGVGETGCLAANRLAKEADLVIGIGTRYTDFTTSSKWIFQNPNVQFLNINVARFDA
                     YKLDGVQLVADAKTALEALSQAIPTDYQAQWENEISQAKADFADEIQRLRAVQYHPDF
                     TPEINDNLDHKAVHNEFIQLTGSQLTQTQVLGIVNETIDNNAIIVAAAGSLPGDLQRT
                     WLSKGEETYHLEYGYSCMGYEVSAAVGVKIARPEQEVYALLGDGSYLMAHTELVTSIQ
                     EGKKINVVLFDNMANGCINNLQIGNGMDSFGTEFRFRNGETNQLNGGLVPIDFAKNAE
                     AYGCKTYRVTNEAELRAALDDAKKQTVSTLIDIKVLPKTMAHGYGCWWHVGVAEVSES
                     ERIQQARQRSEEQLAKARKY"
     gene            8465..9361
                     /gene="iolE"
                     /locus_tag="PXF40_001306"
     CDS             8465..9361
                     /gene="iolE"
                     /locus_tag="PXF40_001306"
                     /EC_number="4.2.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011817366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="myo-inosose-2 dehydratase"
                     /protein_id="HDL5802646.1"
                     /translation="MKAENIQLGIAPIGWTNDDLPELGAENTFEQCVSEMALAGYTGC
                     EVGNKYPRDVAVLKHKLDVRGIQICNAWFSTFFVDGKREETIAEFIKHRDFLHAMGAK
                     VIGCSEQSRSIQGTTKSVFKEKPIFNDEDWKRMAEGYNELAKLAAEKGMKVCLHHHMG
                     TGIQTPEEVDRYMAEVNDDVYLLFDSGHLYYSEGCQKAMLGVLEKYIDRIIHVHLKDV
                     RDEVMAEVKAKDLSFLEGVKKGTFTVPGDGVIDFRPIFDILEKHDYKGWMVVEAEQDP
                     ALANPFEYALKGRKYIRETAGV"
     gene            9363..10373
                     /gene="iolG"
                     /locus_tag="PXF40_001307"
     CDS             9363..10373
                     /gene="iolG"
                     /locus_tag="PXF40_001307"
                     /EC_number="1.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005537901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol 2-dehydrogenase"
                     /protein_id="HDL5802647.1"
                     /translation="MLKVGIIGAGRIGRVHSESISKYVKGAEIKAISDVKITEELTAW
                     AKSMGIPEVYDDYKKILQDPEIDAVLVCSSTNTHAPISIEAAQAGKHVFCEKPVDADP
                     AKIREVLSAVEKAGVKFQVGFNRRFDHNFKAIKDRVAAGDIGEPHVIRVTSRDPEAPP
                     IEYVKVSGGMFFDMTIHDFDMIRYLSGSEVEEVFAVGTVLVNPEIGKAGDIDTAVITL
                     KLKNGAIGVIDNSRKAAYGYDQRAEVFGSKGAIHITNDTGSTAVFSGENGVVAEKPKY
                     FFLERYMQSFADEISCFVDSVVNDKPTLVNGNDGLQPVLIALAAKKSLEENRPVKLSE
                     VA"
     gene            complement(10752..11174)
                     /locus_tag="PXF40_001308"
     CDS             complement(10752..11174)
                     /locus_tag="PXF40_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802648.1"
                     /translation="MSSIKEIFSTKNSPINVLMQTEWFLGFILIVVYLDAYFQLVHQV
                     PIYIAIQQKEIYLTKTIDYIAAIFFFSVTFTALFTMMRLLHIFILSDLLDKIGCNTYE
                     LPKIEDIHKYEMLSILKIQAAKENNAELRYYVKKKKKK"
     gene            complement(11244..12377)
                     /locus_tag="PXF40_001309"
     CDS             complement(11244..12377)
                     /locus_tag="PXF40_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015433643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HDL5802649.1"
                     /translation="MKTIKIGLVGTGYIGRCHAIAYAQAPTLFPLKGKIQLEYLAEIN
                     QALADQKAREFGFQRATDDWRKLVTDPNVDVVDICTPNFLHKEIALEAIKHGKHVYSE
                     KPLALTAQDAKEMVIAAQQAGVKTLVGFNYIKNPTTQLARQIIQNGEIGEVVHFYGTH
                     NEDYLANPNTPIDWHCYKAKAGLGTLGDLAAHIVSIAHYLVGSDIERVIGDMQTVIEE
                     RPSPHNPAEKIKVENEDQASSLIRFANGVMGTLESSRISCGRKMGLTYVVTGTKGTLS
                     YTQERMAELKLYLHDDDKSRQGFKTILVGPEHPDYAAFCVSAGHGIGFNDQKAVEIRD
                     LINGIAADDPMYPDFEEGYKISRVLEAIAKSAEEKRWVEVSEI"
     gene            complement(12508..13536)
                     /locus_tag="PXF40_001310"
     CDS             complement(12508..13536)
                     /locus_tag="PXF40_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802650.1"
                     /translation="MTTQFLKNMGMVDDKGKIDFIAFFERFGVLIFLILLIIFFTSQN
                     GAFLSQRNIYNVLTEVSIFGIMAVGMTFVILTAGIDLSVGSILAVTAMFAAYIIKGDN
                     TVTLEAGAWGGMSWLIGLSICLGLGTFIGWLHGLGVTKLKLPPFIITLGGMTIWRGLT
                     LVLNNGSPIAGFDEGYRWWGRGDILGVPVPVVIFAVVAIIGYFALHKTRWGRYVYSVG
                     GNPEAARLAGVNINRTLVSVYVVIGALAGLAGFILSARLGSAESVAGVSFELRVIASV
                     VIGGTSLMGGYGRVTGTIIGSIIMGVLINGLVLMDVSAYYQQIIMGLIIILAVAFDTY
                     AKSRRGAL"
     gene            complement(13548..15092)
                     /locus_tag="PXF40_001311"
     CDS             complement(13548..15092)
                     /locus_tag="PXF40_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5802651.1"
                     /translation="MSTPLLEVKDLTKSFSGVMALNGVKLTVGKGEVHALLGENGAGK
                     STLLKALSGAQPQTSGEIIFNGETLSLSDSPFDRQLKGIVTIYQEFNLLPNMTVAENF
                     FLGREPVKGLFVNEKAVNEEAQLVLDNLGLNIKPDTQVSRLSVAQQQMVEIARAMTLN
                     AKLIIMDEPSAALSDKEVETLHQIVRDLKSRGISVIYVTHRLNEVFALCDRFTVFQDG
                     RYSGEGEVKNVNVDQIIKMMVGREVAFTRRPPEETHHTHRPIRLAVKNLHREKPAFDP
                     HGIALHGVSFNIHEGEVLGIAGLVGAGRTEIARCLFGVENYTADEISLDGKPYAATSP
                     LDALEKGVALVPEDRKKEGLVLGLPIKTNMTLPILSKLLKGNLFVDNQKEDDLIETYR
                     QALRIKMASSELEARKLSGGNQQKVILARCMALNPKVLIVDEPTRGIDVGAKSEVHQV
                     LFDMAKQGVAVLVISSDLPEIMAISDRIITLSEGRVTGEIHGDDATEEKLMSMMAVGV
                     QRKAAA"
     gene            complement(15143..16081)
                     /locus_tag="PXF40_001312"
     CDS             complement(15143..16081)
                     /locus_tag="PXF40_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HDL5802652.1"
                     /translation="MKKRIKFVLSALTLGLAMNSFAKDELVVFSLPNLSSPFEVQLQK
                     VAVETSKKLEIKLQVLDGQSSSTKQASDLENAITRGAKGIIISPNDVNAISGAVEEII
                     KEKIPAATLDRKVESSKPVPHFGANNYTGGQEVAKAVKAKYPNGAKIILLTGQPGSTS
                     NIERTKGIRDELAAGGDKYKIVVDQTGNWLRSEGLRIIESVLPTLKEKPEVIISANDD
                     MALGAIEALRSQGLKAGDILVTGFDSTPEALARVKDGWLYLTADQRPSFAVSTALEQV
                     VGNIRESKEVSGADYPPKIILKDNLQEAERFAEISE"
     gene            complement(16413..17924)
                     /locus_tag="PXF40_001313"
     CDS             complement(16413..17924)
                     /locus_tag="PXF40_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5802653.1"
                     /translation="MSQFVQNFINGAVVESQSQRVTSVFNPATGEETKKVKLSLPNEV
                     DAAIAAADQAFKSWSQQSPLRRARILFKFKELLEANFDELARLISSEHGKIYSDAIGE
                     LTRGLEVVEFATGIPHLQKGEFSANAGRGIDIHSIQQPLGVVAGITPFNFPAMVPMWM
                     FPVALACGNTFVLKPSEKDPSVSIRLAELLKEAGLPDGVFNVVQGDKEAVDILLTDSR
                     IQAVSFVGSTAIAQYIYEKGSANGKRVQALGGAKNHALIMPDADVQGTINALLGAAFG
                     AAGERCMALSVAVVVGDELADKIIEELIPKVKALKIGSGLLPQGVLENDMGPVISKEH
                     KAKIESYIDQGVAQGAKLCVDGRGYKVEGFENGYFVGGTLFDNVTPEMTIWQDEIFGP
                     VLSVVRVKDYAEGIALINSHQYGNGSAIFTADGDSARQFTQDVQAGMVGVNIPIPVPM
                     AFHCFGGWKASIFGPLNVYGTDGVRFYTRMKTITTRWPDSSVRSQAAFNFPTL"
     gene            18143..18967
                     /gene="iolB"
                     /locus_tag="PXF40_001314"
     CDS             18143..18967
                     /gene="iolB"
                     /locus_tag="PXF40_001314"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HDL5802654.1"
                     /translation="MSSPLLSKPNFNQHEGLIQHITPENAQWEYVGFDVYQLSKQQIT
                     LESGENELCLVFVTGFGSVYVDDYAFENIGNRTTPFEKIPPYAVYIPPHKSVLVKTEL
                     NLELAVCKAPSQGNYPVRLISPNHIGVEKRGFGNNQRLVHNILPETEAADSLLVVEVF
                     TDEGNTSSYPSHKHDDKHSTEETYLEETYYHRFDPPQGFAMQRVYTDDRTLDECMAVY
                     DKNVVKVPRGYHPVATIAGYNNYYLNVMAGPVRKWKFTWEQDHLWVNSETYKAKFE"
     gene            complement(19043..20494)
                     /locus_tag="PXF40_001315"
     CDS             complement(19043..20494)
                     /locus_tag="PXF40_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HDL5802655.1"
                     /translation="MPNHKFLLLRFQAYINGKFVSSQNGKTFTVQNPTNGEKIGEVAD
                     LGTEETAQAIEAAAVAQKKWQALLPKERSVILRKWFELIMQNQEELAQILSLEQGKPL
                     AESRGEIAYGASFIEWFAEESKRIYGDVLPQDKAGRRLFVTKQPIGVVAAITPWNFPN
                     AMITRKAAPALAAGCAIVIKPAAETPLSALALAQLADQAGIPKGVFNIITSSDVEGVG
                     RELSTNPTVRKLTFTGSTRVGKILMQQSAGTVKKLALELGGNAPAIVFDDADLDTAVE
                     GVFASKFRNGGQTCVCANRIYVQAGIYEQFLAKLSEKVAQIKLGSPFEEEVTIGALIS
                     ERAVEKVESHINDALSLGAELVLGGERHALGGTFFQPTILKNVTQAMKVAREETFAPL
                     APIFKFETEEEVIQWANDTEFGLAAYLFSQNIGRIWRVSEQLEYGIVGINEGIISNEI
                     APFGGWKESGLGREGSKYGIEEFLEIKYLCMKV"
     gene            complement(20672..21982)
                     /locus_tag="PXF40_001316"
     CDS             complement(20672..21982)
                     /locus_tag="PXF40_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HDL5802656.1"
                     /translation="MIYAEIFVVLAAIYLGLRSGGLGIGLYGGLGLAILTLGFGLPMG
                     SIPVDVMLIIMTVVIGAAVLQAVGGMDLLVRYAEVLMRKNPKYINFIAPMITWLMTIM
                     AGTGFIVFSTLPVIAEVAKESGIRPSRALAGSVVSSQLAIAGSPLSAAMAAMIAVMEN
                     NSVTFFQVIAVCLPVSFIASMVAAFVASKQGCELQNDVVYLERLKAGIVSPSRKLASE
                     STYSKGAKLSIGIFLLATVLVVLLAAVPGLKPVYENGKSMSTRDIIIVMMLASSCLMM
                     LVGKIKPDTIVASPIFRSGMTSIAVIIGIVTLGMTFVDAHLIEIKASIGNILTEYPML
                     LAVVLFFTCALLYSQGSTSALIIPLAVSLGIPNWAILASFIAITGIFILPTYPTSLAA
                     MELDTTGSTRAGKYIIDHPFMLPALVGVAVGLAFGFVWAPMIVS"
     gene            complement(21998..22693)
                     /locus_tag="PXF40_001317"
     CDS             complement(21998..22693)
                     /locus_tag="PXF40_001317"
                     /EC_number="5.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HDL5802657.1"
                     /translation="MARNIIGILGGMGPAATADMFQKFIRLTPADCDQAHIPLLISSI
                     PDIPDRTRYILANGENPAPVMEKYIEGLESAGATCIIIACNTAHYWFEHLKAKSQVEM
                     LSMIDCVVDEVLKCGKWRVGLLATDATLAVDLYKKQLEAQGLTFICPTENGQKAVMDS
                     IYLLKSGELEKATELMLQQRDELIRLGAEVIILGCTEVPIILAQEIEREPMRYVDSTL
                     VLVKKAIDWYQTH"
     gene            22909..>23351
                     /locus_tag="PXF40_001318"
     CDS             22909..>23351
                     /locus_tag="PXF40_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802658.1"
                     /translation="MKNIETKWLEDFLTLEECRHFSQAAEKRNLSQSAFSRRILALEE
                     VVGVKLFDRTSIPLQLTEQGKLFHSQTRNLLQQLQNNLDELLGHNCNLPNIKFAAAHS
                     LSLSIMPKLIKKLSQTNENFIYSVEAIDVDQTVNTLIEGKSDFIFS"
BASE COUNT         6764 a         5232 c         4827 g         6528 t
ORIGIN      
        1 tgtctgataa atctatcatt ctagaaatta ttaatgcttt aggaaacaaa gagaatatca
       61 agcaagttga agcttgttta acccgtttac gtgtggtgtt acataacaac ggtttattaa
      121 ataagtcggc actgaaaaag cttggggcgg ttgatgtcat taaagtcggt gatacgcaac
      181 aaattatttt tggtgcaaaa gccgggcagt atcgtgatga aattaacgct ttaatcggtt
      241 aatagacaaa gacctgtatt tacgcaggtc tttcactttc ttaatctagg cttttttcaa
      301 cgccagtgaa acggcaatcg tttgtgcgag cgtcattgtg gcacactggg atcgaaaacc
      361 actcacctgt gcttctttaa taataaacga cacatcgcta aatgaaagga gtgggctaag
      421 ttggctatca gtgatcgcaa tatgttttac ccccggtctg gcagttgctg tcaccacgtt
      481 gagtgtttca ttcgcatacg gggaaaagct cacggcaatc accgcatcac cttcacggat
      541 tcggcttaat tgctcgtcaa acataccgcc cgaaccatcg atcataaaga catcatagtc
      601 caaatggtgc aacgcatagt ttaggtagtt cgcaatgctg aatgagcgtt ttaaacccac
      661 aataaaaatg cgtttggcat tgtgtaaaat atctaccgtt tgtgctaact gctcttcgct
      721 gacttgtgtc gataactgtt gcagtgcctg cgtattaccc tgtacgaaca catctaaaat
      781 atgattgagc tcactgtttt gctcatcaag cggttcaatt tgacgaaaaa gttgcacacg
      841 ttcggtgtaa cgtgatgtgc cttccatcat atcttggcga taaagctgtt taatttcatt
      901 aaaaccgcta aatccaaacg cattcgcaaa acggattaag gttgaagggg gaacatcagc
      961 tcgttcagca atggtagaaa ccgtatcaaa caccacgctg ttgccattat ccagcacata
     1021 ctgtgccact tgttttaaac gtttacttag tccgtcatac tcttttcgga tttgttcttg
     1081 aaaatgtgct aattgagtag gtccattcat ttcaaattat ctctgcttga attttttatt
     1141 tcattatacg cttttcttgt ttacaagcgg ataaattttg tcaatttttt gcaaaaataa
     1201 gggctaatct ttcgattagc ccctctcaat tacgctagaa ataagtgtta ttgtgctgcc
     1261 attcgtgctt tttctagcaa ctcctgttgt gctttttcat ctagattttg tgctttttct
     1321 ttctcgacgc agactttttc atacattttg aagaatggat agtagatcac aatatccaaa
     1381 ataatcagtg caatacttaa aattggtgcc caaatatcac cggcagaaac cagatatgcc
     1441 ccaatcggtg ccggtgttgt ccacggtgcc atcaagtaaa cacggtgaat aaggttaaaa
     1501 tctaaaatca ggtaggcaat aaccgcattc gctagtggtg cgaaaatcag cgggataaag
     1561 aacagcggat taaccaccat tggcacacca tacacaattg gttcaccgat agagaagaag
     1621 gacggaacca agccgatttt accgatagag cgtaagtgtg ccgatttact gcgtaccagc
     1681 aggaatgcca aggctattac accaccactt gccccgtgta cgatatagaa atcccagaag
     1741 gaattggtga tgataaaggg gagcggttca ccagcttgga atgctgctaa gtttgccgcc
     1801 atattttgca gtaggaatgg tgtccaaagt tgcattagta ccaatgagcc gttaatgcct
     1861 aagaaccaga gcaaatgggt agcaataacg aacaagcaaa ttgcccctag cgagtcactc
     1921 acagcaatca atggcgccat aaagtccata attagttgtg gaatattacg acctgtggca
     1981 ctttccaccc aaatggcaaa cggatagaga gtcagtaaaa tcgctaaaat tggaatcacg
     2041 atattcagag attctgctac agcgtgcggc acttctttcg gtaagcggat tttaattttt
     2101 aagaactcca acaagcgggt catttctacc gaataaatgg caataaaaat cgcagagaat
     2161 agcccaatac cgccaaagaa tttaatatcc atcattccgt ctttgaccgg tgcagccact
     2221 aacaaaaatg ccattaccga gagaaatgcc gctggcaggg gctctctttt ataggctttg
     2281 gcaaggttgt aggcgatact ggcagaggta aataatgaaa tcgcattaaa cgacatttgg
     2341 aagaaattcc aaccgtaagg gcttgcccaa ttcgcaaaac gccaccaagc ttgcccgaaa
     2401 gcattttggg tattttcatc aaatggcgga attagcaaaa tcataataaa gctgccgaca
     2461 attaagaatg gtaacactac aataaaaccg tctcgaatag cggaaatatg cggttgattt
     2521 tccattcgac gtgctactgg agcaacgtgg gcattcataa agtcaataaa acgttgtgaa
     2581 acggacatac ctatttctcc ccatctgcaa ttttaaagcc taatacatac caatccggct
     2641 ggtagttttg aatatgtaac actctgcctt gtgcggtgtt ttcaatggta aatttcagct
     2701 cggtattgag tgcttgtagc tcaccataaa ctgacagtgg caagctgatt tgggcttcgg
     2761 ttaagccatc aatgtaaaga tagagatccg ccccaacttt ggtataacga taggttacat
     2821 caccgatttg ctcggtttgg tgttggctac aacgggattt atagattccc tctccattta
     2881 tttccagcca gctccccagt gctaataagc gttcaacttg ctcttgcgga atagtgccat
     2941 ctgctttcgg gccgatattc agcaataaat tgccgttgtc ggctacggtt tctaccaata
     3001 gggaaatcaa gtctttcacc gaaatcaaat ggctttcgtc ttctacctgg ttatagccga
     3061 acgataagcc cataccacgg cacatttccc atttcttatc acgggaagcc acgccgtgtt
     3121 tgtattcttt ggaggtgaaa tcgcaccata gtttgttcca gcggtcgtcc actacgccct
     3181 cttgaacgct gttgtaataa tgagcaaata ggtgtggtaa catatgctcg cccacttttg
     3241 gccagccaat atcattccac aatacatctg gtttatagcg gtcgatcagc tctaccactt
     3301 gtttataggc gtagtcagcg tattcgtaag tcgggcaagc gtttgagaag ttttgacttt
     3361 cggtgaaaat cggggcagag gaataagtcc aatcgataat gcccgagtag taagcgccca
     3421 tttttaagcc ttgctcccgc acattttcag tcagctcgcc cattaaatcc cgcttcggtc
     3481 cggcttgcat acagttgaaa tcggtatatt tacttggata gagacagaaa ccatcgtgat
     3541 gtttggtggt taataccaca tatttggcgc cagctttggc aaacagtttc gcccattctg
     3601 ctggttgcca tttttccgct ttccatagtg gcaggaagtc gttataggca aaggattcgc
     3661 cataagtttt gatatgatgt tcgtaggtcg ggcctttttt gacattgatg gaattaaaat
     3721 accattctgc ataagggtta ttacagaacc actgttcatc aatatcaatt tcacctaact
     3781 gacaggtcgg tggggcaaag gcgggtacgg agtaaatccc ccagtgaata aaaatcccaa
     3841 acttagcatc ttcataccac tctggtactt ggtgctgttt gatcgactcc caactggcgt
     3901 ggaaacgttt tggtgaagtg ttgcaactca tacacagact cctattgaat ctaaatagaa
     3961 ctaaactgaa atacattttc cattttgata aaaataaaac aatttgtttc gataaaaagg
     4021 ggggggttta tgtatgaaat gtgaacttca tcacacttat tttgtgataa gcagattgag
     4081 gaatgcccga tattcgcttt tttaggaaaa ttcgggcatt tttacggcta gcaagcggtc
     4141 tgtttagccg gattttttgc aaaacaaaac cccttgctta atatcataag ctaaggggtt
     4201 ttcacttaaa gcaatatgat taacgttgtt gccagagatc gattaaagtg cgatatttct
     4261 ccgataccgc agaaatcaag gtattgtcgt ccaattcacc ggcaagccat ttttcggacg
     4321 gttcaccgaa aatggtgcgg ccgactgcaa agcctttcac tttctcacag ccttttgcct
     4381 gttcaaaggt gtctttaaac acctctaacg gggcatctaa acctaaaatt aaaataccac
     4441 gacagtccgg atcgtttgcc tcaatggtgg cggaaatcgc ttgccattgt gcgcgagaaa
     4501 catccggcaa tttccaccat tccggcttaa tgccaagttg gtagaaatgt gctatcgctt
     4561 ggttatagaa agcctcactc tgtggcatat cagcaggcag aataatttcc aacaatagct
     4621 cgtgaccggt acggcaacag gcttgataca cctcttttaa cttgcgatct tggcgggctt
     4681 ttaaaccgct ttcatcattc gggtggtaaa atgccaagca tttgatgacg tgatcgcgtg
     4741 ggaatgatgc tagctgagag cctaaatctc catactctaa ttccagcggg cgggaagacg
     4801 gctcttcaat cgggcgggca atccagtaat ctttgccggt aatctcatta agtacatctt
     4861 gcccgaaagt ggtatcggct aggatccctg cttgattttg tggtaagccg gattgagttg
     4921 cggtttgttc catcgctttt aatagcagct gtttcagttt cggtatgcga gcaagatctg
     4981 caccgacttt atttgccata tccaccaact gtttgcggtg atcaaaagca aaaatacaga
     5041 gattttccca ctgttttttg cgggtggtga cacggtgtaa gtggtttaaa cgctcatcta
     5101 aatccggacg tggtacactc tctgcacggg ttaaataatc gtcaagttca cgtttggtcg
     5161 gcattgccgg tgaacagccg tgacgagata ccactaacgc tccgcacgca ttggcatagt
     5221 ggcacgcttg ttcccaacct tcgttattta agtagccacg cagtaagccc gacataaaag
     5281 catcgcctgc acccagcaca ttcagcactt ctacacgcac gccgtacaca ttcaagccac
     5341 cgtctaaatc attcggcagc tcgccttcaa atactgaaca ccctaatgcc ccacgtttgc
     5401 acactaatac ggcattagag actttacgca catttttgag tgcagtgaga gtatcggtcg
     5461 aaccgcctgc gatatgaaat tcttcctctg tgccgacaat cagatcgaaa tggtgcaata
     5521 cttcttgtag cgatttggtg acttcggcac tgtctatata acgggtttcg ccatcaccga
     5581 gtgaggttaa tccccataac acagggcgat aatcaatatc taacgctcgt tttacctcat
     5641 ttctacccgc atattcgagt gcggtcagca cagcttcacg ggttttaggg tttgacaggt
     5701 gcgtgccggt aattgctaag caacggctgg aagcaatata ggcttcgcta aaatcgtctt
     5761 tggtgattgc catatccgca cagttatcac gatagaaaat cagcggaaaa gtctctttat
     5821 ctttaatgcc gagaataacc agtgcagtta agcgttcttt atcggtaatt aaatggctgg
     5881 tgtccacgcc tacgctttgt agctcttcac gtagaaaacg ccccatatgt tcgtcaccga
     5941 cccttgccag cattgaagaa cgtaaacctt gcaccgccgt accgtaagcc acattgcctg
     6001 acgagccgcc gaggtatttt gaaaatgtgg tcatctcttc caaacgggaa ccgatttgtt
     6061 gcccataaaa gtccaccgcc acacgcccta aacagataag atccaatgga cgatcttgat
     6121 gattaactgt tgccataacc gctccttaca acaagtaaat ttgaatacac actatacatc
     6181 atacaaaaat gaaattttta tttcaaattt attctattta aattatcatt tctgtgatct
     6241 agctctcact ttgaaaaata aggcaataac ttcgcagaaa tgagaactgg atcacatctt
     6301 tttttcgatt tccttgctat tataaatgaa ataaattttt catttgtaaa aatcagtaga
     6361 aaaccgaccg cttgcaaaag cgatgtaagc cagaggaggc tttatgcaga ctactcgttt
     6421 aacggttgca caggcgttag tgcaattttt ggataatcaa tatttagacg tggacggcaa
     6481 agagattaaa ttcgttcacg gtgttgccgc tattttcggc cacggcaatg tgctgggaat
     6541 aggtcaggcg cttgctcaaa atgccggtgg tttaacgctc taccaaggca gaaatgagca
     6601 aggtatggca catttggcga tgggctttgc taagcaaaat ctgcgtcaaa gaattattgc
     6661 ctgtacttcc tcggtcgggc cgggggcggc aaatatggtt acggctgcgg caacggcaac
     6721 agcgaaccgt attcctcttc ttttattacc gggcgatgtg tttgcgaccc gccagccgga
     6781 tccggtactg caacaaatcg aacaacctta cgatttaagc attagcacta acgatgcgtt
     6841 ccgtgccgtc agtaaatatt gggatagagt gcaacgccct gagcagttaa tgagtgcttg
     6901 tatcaatgcg tttcgtgtgc tgaccgaccc tgctgaaacc ggtgctgtca ccattgctct
     6961 gccgcaagat gtacaagcgg agagttttga tttcccgaac agcttcctgc aaaaacgagt
     7021 gcatcgctta gagcgtacac cgccgacaac agcgatgatt aagcaagcgg taacattaat
     7081 tcaaaccaag aaaaaaccgc tgattgtctg cggtggcggt gttcgctact cgcaagcggg
     7141 tcaaattctg caaaaatttg ctaaacagtt cggcattcca tttgctgaaa cccaagcggg
     7201 taaaagtgcg gtggtgtccg atcacgcatt gaatgtaggc ggagtgggag aaaccggttg
     7261 tttagcggca aaccgtctgg caaaagaagc ggatttagtg attggcattg gtacacgcta
     7321 caccgacttc acgacttctt ccaaatggat tttccaaaac ccaaacgtgc agtttttgaa
     7381 cattaatgtg gcacgttttg atgcgtacaa attagacggc gtgcaactgg ttgccgatgc
     7441 aaaaactgca ttagaggcgt taagccaagc cattcctact gattatcaag ctcaatggga
     7501 gaatgaaatt tcacaggcga aagcggattt tgctgatgaa attcaacgcc tgcgcgctgt
     7561 gcaatatcac cctgatttca cccctgaaat taacgataat cttgatcata aagcggttca
     7621 caatgaattt attcagctca ccggttccca gctcacccaa acccaagtgc tgggtattgt
     7681 gaatgaaacc attgataaca atgcgattat tgttgccgcc gccggaagtt tgccgggtga
     7741 tttacaacgc acttggttaa gtaaaggtga agagacttac caccttgaat atggctactc
     7801 ctgtatgggc tatgaagtga gtgcggcagt cggcgtgaaa attgcccgcc ccgaacaaga
     7861 ggtctatgcc ttgctggggg acggctctta cttaatggca cacaccgaat tagtgacctc
     7921 aattcaagag ggcaaaaaaa tcaacgtggt gctgttcgac aatatggcaa acggctgtat
     7981 caacaacctg caaatcggca acggtatgga cagtttcggt acggaattcc gcttccgcaa
     8041 tggcgaaact aaccaactca acggcggttt agtgccgatt gattttgcca aaaacgccga
     8101 agcatacggc tgcaaaacct atcgggtaac taacgaagcc gaattgcgtg ccgcccttga
     8161 tgatgcgaaa aaacagaccg tttctacctt aatcgatatt aaagtgttgc cgaaaacaat
     8221 ggctcacggc tatggctgct ggtggcacgt tggtgtcgcg gaagtgtcag agagcgagcg
     8281 tattcaacaa gcccgccaac gctccgaaga gcagttagct aaggctcgga agtattagtt
     8341 aaaaaaacaa ctccccactt tgagctacga ggggagaata tcaagcggtc aaatttgcaa
     8401 aatttttgat aaaaataacc gcttgcatcc aaatttatct ctataaatca aacgaggttt
     8461 ctctatgaaa gctgaaaaca ttcaattagg cattgcccca atcggttgga cgaacgatga
     8521 cctgccggaa ctgggagcgg aaaacacttt cgagcagtgt gtgagtgaga tggcacttgc
     8581 cggctacacg ggctgtgaag tgggtaataa atatccgcgt gatgttgccg tgttaaaaca
     8641 caaactggac gtgcgtggca ttcaaatctg taatgcgtgg ttcagcacct tctttgtgga
     8701 cggtaaacgg gaagagacca ttgccgagtt catcaaacat cgtgatttct tgcatgcaat
     8761 gggggcaaaa gtgatcggct gttccgaaca gagccgtagt attcaaggca caaccaaatc
     8821 tgtgttcaaa gaaaaaccga ttttcaacga tgaagattgg aaacgtatgg cagaaggcta
     8881 taacgaattg gcgaaacttg ccgccgaaaa aggaatgaaa gtctgcctgc atcaccatat
     8941 gggaaccggt attcaaacac ccgaagaggt cgatcgctat atggcagaag tgaatgacga
     9001 tgtctatctg ttgttcgatt cagggcattt gtactattcc gaaggctgcc aaaaagcgat
     9061 gctcggcgta ctggaaaaat atatcgaccg tattatccac gttcacttaa aagatgtgcg
     9121 tgatgaagtc atggcggaag taaaagcaaa agatttaagc tttttagaag gcgtgaaaaa
     9181 aggcaccttt actgtaccgg gcgatggtgt cattgatttc cgtccgattt tcgatatttt
     9241 agaaaaacac gactacaaag gctggatggt tgtagaagcc gaacaagatc cggcacttgc
     9301 caacccgttt gaatacgccc tcaaaggcag aaaatatatc cgtgaaaccg caggagttta
     9361 atatgttaaa agtaggtatt attggtgcag gccgtattgg acgtgtgcat tctgaaagta
     9421 ttagcaaata tgtcaaaggt gctgaaatca aagcaatctc tgatgtaaaa attaccgaag
     9481 aattgaccgc ttgggcaaaa tcgatgggta ttccggaagt ttatgatgac tataaaaaaa
     9541 tcctgcaaga tccggaaatt gatgctgtat tggtctgctc ttccaccaac actcacgctc
     9601 cgatttcgat tgaggcagca caggctggca aacacgtttt ctgtgaaaaa ccggtagatg
     9661 cagacccagc taaaatccgt gaagtattga gtgcagtcga aaaagccggt gtaaaattcc
     9721 aagtgggctt taaccgccgc ttcgaccaca acttcaaggc gattaaagac cgtgtggcgg
     9781 caggcgacat cggcgaaccg cacgttatcc gagtaacctc tcgtgatccg gaagccccgc
     9841 caatcgaata tgtgaaagtc tccggcggaa tgttctttga tatgaccatt cacgacttcg
     9901 atatgattcg ttatttatcc ggcagcgaag tggaagaagt gtttgcagtc ggcaccgtat
     9961 tagtaaaccc tgaaatcggc aaagcgggcg atattgatac tgccgttatc acgttgaaac
    10021 tgaaaaacgg agcaatcggc gtaatcgaca acagtcgcaa agctgcctac ggctacgacc
    10081 aacgtgcgga agtgttcggc tcgaaagggg caatccatat cactaatgat accggctcaa
    10141 ctgccgtatt ctcaggtgaa aacggcgtgg tggcggaaaa accaaaatac ttcttcttag
    10201 aacgttatat gcaatctttc gccgatgaaa tcagctgttt cgtagattct gtggtaaacg
    10261 acaaaccaac gttagtaaac ggcaatgacg gcttacaacc ggtacttatt gccttagctg
    10321 cgaaaaaatc actggaagaa aaccgaccag tgaaattgag tgaagtggcg taattgatca
    10381 taaatacaag cggtcggttt tactcgctac actcgcactt cgtgccatcg gcatagccga
    10441 tgttcaaacg caagcatttt gcagaaaaat ttgtaaaact gaccgtttga gtttttattt
    10501 attatctttt gggaaataaa tataatcgtg ctcaattttt attgattgtt taaataaata
    10561 gaaggctgga attatcaaaa gagttaatac aataccaata aaatatttaa aattttctgt
    10621 ttgcattcca atatattcaa aagtgaatct aatcccaaga gggtaattcc cccattcttt
    10681 tgccaaacag atatgaataa tcaaaaagaa gataatacct aaaaaacgtc gagatattga
    10741 tattctgact ctcatttttt cttcttcttt ttcacatagt atctcaactc tgcattattt
    10801 tccttagctg cttgtatttt taatattgaa agcatttcgt atttgtgtat atcttcaatt
    10861 ttaggcagct cataagtgtt acatcctatt ttatcaagaa ggtctgataa aataaaaata
    10921 tgtaataaac gcatcattgt aaataatgca gtaaatgtaa ctgaaaaaaa gaaaattgct
    10981 gcaatataat caatggtttt tgtgagatat atttcctttt gctgtatcgc aatatagata
    11041 ggcacttgat gaacaagttg gaagtaagca tccaaataaa caactatcaa tatgaagcct
    11101 aaaaaccatt ctgtttgcat aagaacattg atagggctgt tttttgtgct aaaaatttct
    11161 ttaattgaac tcataatttt tccttaaatg taaaaaaacg tacctcaacc aatttgagat
    11221 acgtttctat tttaatgtaa ttattaaatc tcactcacct ccacccacct tttctcctcc
    11281 gccgattttg ctatcgcttc caatactctg gagattttat agccttcttc aaaatcggga
    11341 tacatcgggt catcagcggc gatgccgttg atgaggtcac ggatttccac cgctttttgg
    11401 tcgttaaaac cgatgccgtg accggcactc acacaaaaag cagcgtagtc gggatgttcc
    11461 gggccgacta aaatggtttt gaatccttgg cgggatttat cgtcatcgtg caaatagagt
    11521 ttgagttctg ccattcgttc ttgggtatag ctgagcgtgc ctttagtacc tgtaacgaca
    11581 taggtcagcc ccattttacg cccgcaggaa atgcgggagc tttcgagcgt gcccattacc
    11641 ccattagcaa atcgtatgag actacttgcc tgatcttcgt tttctacttt gattttttct
    11701 gctggattgt gcggactagg gcgttcttca atcactgttt gcatatcgcc gataacacgc
    11761 tcaatgtctg aaccaaccaa atagtgtgcg atactgacaa tatgtgcggc taaatctccc
    11821 aacgtaccaa gcccggcttt ggctttgtag cagtgccaat caatcggggt attagggttg
    11881 gcgagataat cttcgttatg cgtgccgtag aaatgcacca cctcaccaat ttcgccgttt
    11941 tgaataattt ggcgagccag ttgggtggtt ggatttttga tatagttgaa accgaccaag
    12001 gttttaactc ccgcttgttg agcggcaatc accatttctt tggcatcttg ggcggtgagt
    12061 gcaagcggtt tttctgaata gacgtgtttg ccgtgtttaa tcgcttctaa ggcaatttct
    12121 ttgtgcagaa aatttggtgt acaaatgtcc accacatcga cattcggatc ggtaaccaat
    12181 tttcgccaat cgtcagtagc acgctgaaag ccaaattctc gggctttttg atcggctaat
    12241 gcttggttga tttcggcaag gtattccagt tggattttgc ctttaagtgg aaacagggtt
    12301 ggggcttgag cgtaggcaat ggcgtggcag cgaccgatat agccggtgcc aactaagccg
    12361 attttgatgg ttttcataat actatcccag tagggtgcgt ttgctaacgc accattagaa
    12421 ttttcagtgc attggcaaac gcaccctata agaaagcggt ctggttttgc aaaattttta
    12481 caaaatcaga ccgcttgtgt tagctatcta taatgctcct cgtctgctct tcgcataggt
    12541 gtcgaaggca acggcaagga tgatgattaa gcccataatg atttgttggt agtaagcgga
    12601 aacgtccatt agtactaaac cgttaatcaa tacacccata ataatggagc cgatgatggt
    12661 gcctgtgact cgtccgtatc cccccattag ggaagttccg ccgataacca ctgaggcaat
    12721 tacacgtagc tcaaaagaaa cgccggcaac ggattcggca ctgcctaaac gggcggagag
    12781 aatgaaaccg gcaagtcctg ccaatgctcc gatcaccaca taaacactga ctaaggtacg
    12841 gttaatattc acaccggcta aacgggctgc ttccggattg ccacctaccg agtacacata
    12901 gcgtccccag cgggttttat gcaatgcgaa gtaaccgata atggcgacta cggcaaaaat
    12961 cactaccggc accggtacgc ctaaaatatc gccacgtccc caccagcggt aaccttcgtc
    13021 aaatccggca attggcgagc cgttatttaa cacaagtgtt aaaccacgcc aaattgtcat
    13081 accgccaagc gtgataataa acggtggcag tttgagttta gtgacgccta agccgtgtaa
    13141 ccaaccaatg aaagtgccta aacctaaaca gatactcaaa cctatcagcc agctcattcc
    13201 gccccaagca ccggcttcta gcgttaccgt attatcgcct ttgataatat aggccgcgaa
    13261 cattgcggta acagcaagga ttgagccgac agagagatcg atccctgcag ttaagatgac
    13321 gaaagtcatt cctaccgcca taatgccgaa aatcgacact tcggttaaaa cgttatagat
    13381 gttgcgttgc gataaaaatg ccccgttttg tgaagtgaag aaaataatca gtaagatcaa
    13441 gaaaatcagt acgccgaaac gttcaaagaa ggcgataaaa tcgatttttc ctttgtcatc
    13501 gaccataccc atatttttta gaaattgcgt tgtcatacaa acctctctta tgctgccgct
    13561 ttacgctgaa cgccaacagc catcattgac attaattttt cttcggtggc atcatcgccg
    13621 tgaatttcgc cagttacccg accttcggaa agagtgataa tgcggtcgga aatcgccata
    13681 atttccggta aatcggagga aatcactaat accgcaacac cttgttttgc catatcaaac
    13741 agcacttggt gaacctcaga ttttgcccca acatcaatac ctcgtgtcgg ctcatcaaca
    13801 attagtactt tcgggttgag tgccatacaa cgggctaaaa tcactttttg ctgattacca
    13861 cccgataatt tgcgggcttc aagttcgcta cttgccattt tgatgcgtaa cgcttggcgg
    13921 taggtttcga ttaaatcatc ttctttttga ttatcgacaa acaagttacc cttcaataat
    13981 ttgcttaaaa tcggcagggt catattggtt ttaatcggta aaccgagaac taagccctct
    14041 tttttgcgat cttccggcac aagggcaacc cctttttcca aagcatctaa cggcgaggtg
    14101 gcagcataag gcttaccgtc taggctgatt tcatcagccg tataattttc taccccaaac
    14161 aagcaacggg caatttcagt tcgccctgcg ccaactaagc cggcgatccc taatacttca
    14221 ccctcgtgaa tgttaaaaga gacaccgtgg agagcaatgc cgtgtggatc gaatgccggt
    14281 ttttcccgat gcagattttt cacagctaaa cgtattggtc ggtgggtatg gtgagtctct
    14341 tctggtggac ggcgagtaaa ggcaacttca cgtcctacca tcattttaat aatttgatcg
    14401 acattcacat ttttgacttc accctcacca gaatagcgcc cgtcttggaa aacggtgaaa
    14461 cggtcgcata gggcaaacac ttcgtttaag cggtgggtca cataaatcac gctaatgcca
    14521 cggcttttta aatcacgcac gatttggtgt agtgtttcca cttctttatc acttaaggca
    14581 gcggacggtt cgtccataat aatcaactta gcgtttaagg tcattgcacg ggcaatctcg
    14641 accatctgct gttgtgccac acttaaacgg gaaacttggg tgtcaggttt gatatttaag
    14701 ccgagattat ccagcactaa ttgtgcttcc tcattcaccg ctttttcatt gacgaataaa
    14761 cctttcaccg gctctctgcc caaaaagaaa ttttcagcaa ccgtcatatt cggtaacaag
    14821 ttaaattctt gataaatcgt tacgatgcct ttgagttggc gatcaaacgg ggaatcgctc
    14881 aaacttaagg tttcaccgtt aaagataatt tcgccacttg tttgtggctg agcgcctgaa
    14941 agtgctttta ataaggtcga ttttcctgca ccgttttcac ccaacaatgc gtgaacttcg
    15001 ccttttccca cagtcagttt cacgccattg agtgccataa caccagagaa actttttgtc
    15061 agatctttca cttcaagtaa gggagtagac atacaacctc cgtaaaaaaa cgccctccgg
    15121 cctcagccgg aaggcagata aattattcgc tgatttctgc aaaacgttct gcttcttgca
    15181 gattatcttt caggataatt tttggcggat agtccgcacc gctcacttct ttgctctcac
    15241 ggatattgcc aaccacttgc tctaatgcgg tgcttaccgc aaaacttggg cgttggtcag
    15301 cggtgagata caaccagcca tctttcacac gtgcaagagc ctcaggggtt gagtcaaagc
    15361 cggttactaa aatatcgccg gctttcaaac cttggctacg caatgcttca atcgcaccaa
    15421 gtgccatatc gtcattcgct gaaataatca cttctggttt ctcttttaag gttggtaaca
    15481 cactttcaat aatgcgtaat ccctcagaac ggagccagtt accggtttga tcaaccacga
    15541 ttttatattt gtcaccaccg gcagctaatt catcacgaat acctttggta cgttcaatgt
    15601 tagaggttga acccggctgg ccggttaaaa gaataatttt tgccccattc gggtatttgg
    15661 ctttcactgc ttttgcgact tcttgaccgc ctgtgtagtt atttgcccca aagtgtggaa
    15721 ccggcttact gctttcaact tttcggtcta atgtcgcagc aggaattttt tctttgataa
    15781 tttcttccac tgcacctgaa atcgcattca catcattcgg ggaaatgata atgcctttag
    15841 caccacgggt aattgcattt tctaagtcag aagcctgctt agtagaagaa ctttgcccgt
    15901 ctaatacttg caatttgatc tccaactttt tactggtttc taccgctact ttttgtagtt
    15961 gaacttcaaa cgggctggat aggttcggta agctaaatac cacaagctca tctttcgcaa
    16021 agctgttcat tgctaagcct aacgttaaag cactcaatac aaatttaata cgctttttca
    16081 ttacaaaatc ctctttttaa gatgggaatt gacggcgaat attgccaatg ttacttcaaa
    16141 ctgcgaagga aacttaagtc ttatttcaat aataaacctc aatgaaataa atttttcaat
    16201 ttagaatata tcattcaaaa ttttccaaac caaatgcttt gtttcaaatt tgttacgtag
    16261 atcacatttt taggaagaga taaatgcaag cggtcaaaac aggtcgcttt tttgcaaaaa
    16321 tttgaataaa aatgaccgct tgtgagatga aaaccaataa aaaagcggtg atttctcacc
    16381 gctaaacact caaaaaagaa atgtactcgt tattataagg ttgggaaatt aaatgccgct
    16441 tggctacgca ccgagctgtc cggccaacgg gttgtgatgg ttttcatacg ggtgtagaaa
    16501 cgcacgccgt ctgtgccgta cacattgaga ggcccgaaaa tagaggcttt ccaaccgcca
    16561 aagcagtgga acgccattgg cacaggaatt ggaatattca cgcccaccat accggcttgt
    16621 acatcttggg tgaattgacg tgctgaatcg ccatctgcgg tgaaaattgc actaccattg
    16681 ccgtattggt gactgttaat gagtgcgatc ccttcggcat aatctttcac acgcacaaca
    16741 gagagaaccg gtccgaagat ttcatcttgc cagatggtca tttcaggtgt cacgttatca
    16801 aacagcgtac ctccgacaaa gtaaccgttt tcaaaccctt cgactttata gcctcgacca
    16861 tcgacacaga gtttcgcccc ctgtgccacc ccttgatcga tatagctctc aattttggct
    16921 ttatgctctt tggaaatcac cggccccata tcattttcaa gcacgccttg tggtagtaag
    16981 cctgaaccga ttttcaatgc tttgacctta ggaattagct cttcaatgat tttatcggct
    17041 aattcatcac caacaactac cgctaccgat agtgccatac aacgttcacc ggctgcacca
    17101 aatgctgcgc ccagtaaggc attaattgtg ccttgtacat cagcatccgg cataatcaaa
    17161 gcgtggtttt tcgcaccgcc caaggcttga acccgtttgc cgtttgctga gcctttctca
    17221 taaatatatt gtgcaattgc agttgagccg acaaaactca ccgcctgaat gcgagagtcg
    17281 gttaaaagaa tatctaccgc ttctttatca ccttgcacca cattgaatac accgtccggc
    17341 aagccggctt cttttaataa ttctgccaag cgaatagaca cacttgggtc tttttcagac
    17401 ggttttaaaa cgaaagtgtt accgcaagca agtgccactg ggaacatcca catcggtacc
    17461 attgccggga aattgaacgg ggtaatgcct gccactacgc ccaacggttg ctggattgag
    17521 tgaatatcaa tgccacgccc tgcattggcg gagaactcac ctttttgtaa gtgtggaata
    17581 ccagtggcaa attccaccac ttctaaacca cgggttaatt cgccaatcgc atcggaatag
    17641 attttgccgt gttctgagct gattaaacga gccaactcat caaagtttgc ttccaataac
    17701 tctttgaatt taaataaaat tctggcacgg cgtagtggtg attgttgtga ccagcttttg
    17761 aaagcctgat cggccgctgc aattgccgca tcgacttcgt ttggcaggct taatttgact
    17821 tttttggtct cttcaccggt tgcgggatta aataccgagg taacacgctg gctttggctt
    17881 tcaacgactg caccgttaat aaaattttgg acaaattggc tcattggagg ctccttatca
    17941 actgattgag aggaaaaacg gataaaatac agccgataaa ctaccgctaa aaatggaaaa
    18001 tatcaataca taatactaaa aaatgaaaat tttatttcat ttttgtgatc taagtagcaa
    18061 gtttacagat tgccggtatt aaaatgagac aaaatttcgt atagtttgaa agcgtattcc
    18121 atttcgttaa gcgaggtttc ctatgtctag tccattattg tctaaaccca atttcaacca
    18181 acatgaaggg ttaattcagc acattacccc tgaaaatgca cagtgggaat atgttggatt
    18241 tgatgtttat cagctcagta agcaacaaat tacgctggaa agtggtgaaa atgaactttg
    18301 tctagtcttt gtgaccggtt ttggctctgt ctatgttgat gattatgctt ttgaaaatat
    18361 cggcaaccgt accacgccat ttgaaaaaat tccgccttat gcggtctata tcccgccaca
    18421 caaaagcgtg ttggttaaaa ccgaactcaa tttagaattg gcagtgtgca aagcaccaag
    18481 tcagggtaat tatccggtgc gtttgattag cccgaaccat atcggtgtgg aaaaacgggg
    18541 ctttggcaac aatcaacgct tggtgcataa tattctgccg gaaaccgaag cagccgacag
    18601 tttgctggtg gtggaagtct ttaccgatga aggcaatacc agttcctacc caagccacaa
    18661 gcacgatgac aaacactcta ccgaagaaac ctatttggaa gagacctact accaccgctt
    18721 cgatccacca caaggttttg caatgcaacg ggtttatacc gatgatcgca cacttgatga
    18781 atgtatggcg gtgtatgata aaaatgtggt taaagtgcct cgtggctacc accctgttgc
    18841 taccattgcc ggctataaca actactacct aaatgttatg gcagggccgg tacgcaaatg
    18901 gaaatttact tgggaacaag atcatctttg ggtgaacagt gaaacctata aagccaaatt
    18961 tgagtaatgc aagcggtctt tttccaccaa ttttttacaa aataagggat taaaaatggg
    19021 acgcttttgg cgtcccattc ggttatactt tcatacaaag atattttatt tctaaaaact
    19081 cttcaatacc gtacttcgaa ccttcccgcc caagtccaga ctctttccag ccgccgaacg
    19141 gagcgatttc gttactgatg atcccctcat taatcccgac aatgccatat tccaactgct
    19201 ccgatactcg ccaaattcgc ccgatatttt ggctgaataa gtaagccgcc aaaccaaact
    19261 cagtatcatt cgcccactgg ataacctctt cttcggtttc aaatttgaaa atcggggcaa
    19321 ggggagcaaa ggtttcctca cgagccactt tcatcgcttg agtgacattt ttcagaatgg
    19381 ttggctggaa gaatgtgcca cccagtgcgt ggcgttcacc gcctaacacc agttctgccc
    19441 caagtgaaag ggcatcgtta atgtggcttt cgactttttc caccgctcgt tcactaatta
    19501 gtgcacctat cgtgacctct tcctcaaatg gcgagccaag cttgatttga gccactttct
    19561 cactcaattt tgcaagaaat tgctcataaa tgcccgcttg cacataaatt cggttagcac
    19621 agacgcaggt ttgcccaccg ttacggaatt tagaggcaaa cacgccctca accgctgtat
    19681 ctagatccgc atcatcaaac acaatcgccg gtgcattacc gcctagctcc aatgccaatt
    19741 tttttaccgt ccctgccgat tgttgcatta aaattttgcc gacacgggtg gagccggtaa
    19801 aggtgagttt gcgtacggtc ggattagtgc tcaactcccg ccctacacct tcgacatcgc
    19861 tactggtaat aatgttaaat acccctttgg gaatacctgc ttgatccgct aattgggcta
    19921 atgctaaggc agaaagcggg gtttctgccg ccggtttaat cacaatcgca caacctgccg
    19981 ctaacgccgg tgccgcttta cgggtaatca ttgcatttgg gaaattccac ggtgtaattg
    20041 ctgccaccac gccaatgggt tgtttagtca caaacaagcg gcgaccggct ttatcttgtg
    20101 gcaagacatc gccataaatc cgcttgcttt cttcggcaaa ccactcgata aaactggctc
    20161 cataggcaat ctcgcctcga ctttctgcca atggtttacc ctgttctaga cttaaaatct
    20221 gggcgagttc ttcttggttt tgcataatca gctcaaacca tttacgcaaa atcacggaac
    20281 gctctttggg caataatgcc tgccattttt tctgggcaac tgcggctgct tcaatcgctt
    20341 gagcggtttc ttccgtgcct aaatcagcca cctcaccgat tttctcacca ttagtcggat
    20401 tctgtaccgt aaaggttttc ccattttggc ttgaaacaaa tttaccgtta atataggctt
    20461 ggaaacggag tagcaaaaat ttgtgatttg gcataatcac tccttgaatg gttaaaaaga
    20521 gaacaatatt gactataatc caatttcagt aaagagaaaa gagctgaaaa ataacttttt
    20581 actcaataat aaagcacctt agacaagcgt tcttctaagg tgcagccatt tattattgag
    20641 aattaactta aattctctac atatttaata attaagatac aatcattgga gcccatacga
    20701 atccaaaagc aagcccaaca gcaaccccaa ctaaagctgg aagcataaac ggatgatcta
    20761 taatatattt gccagcacga gttgaacccg tagtatctaa ttccatcgct gctaatgaag
    20821 ttgggtaggt tggcaggata aaaatgcctg taattgcaat gaaagaagcc aaaattgccc
    20881 agttagggat ccccaagctt actgctaatg gaataataag agcagaagtt gacccttgtg
    20941 aataaagtaa tgcacaagta aaaaagagta ctacagctaa caacattgga tattcagtta
    21001 aaatatttcc aatagaggct ttaatttcta ttaaatgtgc atcgacaaaa gtcataccta
    21061 atgtaacaat cccgataatt accgcaatag aagtcattcc tgagcggaaa attggactag
    21121 ccacaatcgt atcaggttta atttttccta ccaacatcat taagcacgaa gaggctaaca
    21181 tcatcacaat aattatatct cgggtactca ttgacttccc attttcatat actggcttta
    21241 accctggaac ggctgcaagt agaacaacca atacagttgc tagtaagaaa atgccaatcg
    21301 atagttttgc tccttttgaa taggtagatt cactcgctaa cttacgagat gggctgacga
    21361 ttcctgcttt taaacgttct aaataaacaa catcattttg caattcacag ccctgcttag
    21421 aagcaacaaa tgcagcaacc atagaggcaa taaaagaaac aggtaagcat actgctatta
    21481 cttgaaaaaa tgtaacactg ttgttttcca ttactgctat catagccgcc attgcagcac
    21541 tcaatggaga acctgcaata gctaattgag aagacacaac cgagccggct aatgctcttg
    21601 aagggcgaat accactctct tttgccactt ctgcaatcac aggtaaggtg gaaaagacga
    21661 taaaacctgt accagccata atcgtcatta accaagtaat catcggtgca ataaagttaa
    21721 tatatttagg atttttacgc atcaatactt ccgcataacg aacaagtaaa tccatacctc
    21781 ctactgcttg taacacagca gcacctatta caacagtcat aataatcagc attacatcaa
    21841 ctggaataga acccataggt aaaccaaaac ctagagttag aatcgcaagc cctaaaccac
    21901 catatagtcc tattcctaag cccccagaac gcagtcctaa atagattgca gcaagtacca
    21961 caaagatttc tgcataaatc atatccatct ccttaaatta atgagtttga taccaatcaa
    22021 ttgctttttt aaccaatacc aacgttgaat ctacataacg cattggctca cgctctattt
    22081 cttgagctaa aataataggt acttctgtac aacctaaaat aattacttct gcacctaaac
    22141 gaatgagttc atcacgttgt tgtaacatta gctctgtggc tttctctaac tcacctgatt
    22201 ttaataaata gatactatcc attactgcct tttgaccatt ttctgtcggg caaataaaag
    22261 tcagtccttg tgcttcaagc tgttttttgt ataggtctac cgccaaagtt gcatcagttg
    22321 ccaacaatcc aacccgccat tttccacact tcaaaacctc atcaaccaca caatcaatca
    22381 tacttagcat ctctacctga cttttggcct tcaagtgttc aaaccaataa tgtgcagtat
    22441 tacatgcaat aatgatgcag gttgcccctg cactctcaag cccttcaata tatttttcca
    22501 ttaccggagc cggattctct ccatttgcta aaatatagcg agttctatct ggtatgtcgg
    22561 gaatagagga aatcaataat ggaatatgag cttgatcaca atcagctggt gttaagcgga
    22621 taaatttttg gaacatatct gctgttgctg caggtcccat tccacctaaa atgccaataa
    22681 tatttcttgc catacacttc tccttataag atttaattta ctgcgatgac ttatacaaac
    22741 aagttatgca aaaaagaaat gcaataaatc gaatcagtat gcaaaaaatg caacaaagct
    22801 ctttatagat agaaaaaaaa tctttaaaat caataaaata ctaatatatc aaatataaat
    22861 ttaatgcatt taatgaaatc ataatgcgaa atttgcattg gttaggatat gaaaaacata
    22921 gaaacaaaat ggttagaaga tttcttaacg ctagaagaat gtcgccattt ttctcaggca
    22981 gcagaaaaaa gaaatttgtc acaatctgca tttagcagac gtattttagc tttagaagaa
    23041 gttgtgggag tgaagttatt tgatcgtacc tctattccat tacaactcac agaacaaggt
    23101 aagctatttc attcacaaac gcgaaactta ttacaacaat tacagaataa tctagatgaa
    23161 ttattaggac ataattgtaa cttacctaat attaaatttg cggcggctca ttccctctct
    23221 ctttctatta tgcccaaatt aattaagaaa ttatcacaaa caaatgaaaa ttttatttat
    23281 tccgttgaag caatcgatgt tgaccaaaca gtaaatactc taattgaagg aaaaagtgat
    23341 tttatttttt c
//
LOCUS       DANMCL010000039        22911 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.039, whole genome shotgun sequence.
ACCESSION   DANMCL010000039 DANMCL010000000
VERSION     DANMCL010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22911
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.039"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            80..673
                     /gene="hisH"
                     /locus_tag="PXF40_001319"
     CDS             80..673
                     /gene="hisH"
                     /locus_tag="PXF40_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HDL5802659.1"
                     /translation="MTNLTIIDTGCANLSSVKFAFDRLGIRAEISRDLNKIQSADKLL
                     LPGVGTAAAAMAILHDRRLIDTIRNATQPMLGICLGMQLMTDFSHEGDVATLNLMSGK
                     TERLPECGLPLPHMGWNKVQYQADHPLFHDIEQGNHFYFVHSYGVLPNENTIATCDYG
                     VPFSAAIASQNFYGVQFHPERSGEAGAKLLRNFVENV"
     gene            772..1617
                     /locus_tag="PXF40_001320"
     CDS             772..1617
                     /locus_tag="PXF40_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor protein"
                     /protein_id="HDL5802660.1"
                     /translation="MNEIKLFENSQIRSVWDSEKEEWFFSVVDIIEVLTQSSNPRRYW
                     SDLKRKIKDEEGGIELYEKIVQLKLKAPDGKMRETDATDLQGIFRIIQSVPSPKAEPL
                     KMWLAEVGKERIDEIIDPELTIDRALATYLKKGYSREWINQRLQAIQVRKELTDTWQD
                     HGVQVGREFAILTNEITQAWSGMTTRQYKDFKGLKKESLRDNMTTTELVLNMLAEAAT
                     KDIAQISHPQGLEENKTVAKRGGNVAKVARESLEAETGKPVITQQNAIDFAAVIEQVA
                     KQVKK"
     gene            1787..2536
                     /gene="hisA"
                     /locus_tag="PXF40_001321"
     CDS             1787..2536
                     /gene="hisA"
                     /locus_tag="PXF40_001321"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006995165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HDL5802661.1"
                     /translation="MQKSIIIPALDLIDGQVVRLHQGDYAKQTTYADDPIAQFADYLA
                     QGAEQLHLVDLTGAKNPAQRQTALIGKIIRETHCKIQVGGGIRTEQDVADLLAVGANR
                     VVIGSTAVKEREMVKGWFKKYGAEKFVLALDVNIDAIGQKIIAMSGWQEASGVSLEEL
                     IEDYQTVGLQHVLCTDISRDGTLAGSNVDLYREICAKYPEIQFQSSGGIGSLADIKAL
                     CGTGVAGVIVGRALLEGKFNVAEAIECWQNG"
     gene            2518..3291
                     /gene="hisF"
                     /locus_tag="PXF40_001322"
     CDS             2518..3291
                     /gene="hisF"
                     /locus_tag="PXF40_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HDL5802662.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAQRYAQEGA
                     DELVFYDITASSDSRTVDKSWVERVAQVIDIPFCVAGGIKTIADAEQIFAFGADKISI
                     NSPALANPELITELAKRFGVQAVVVGIDSWFEAETGKYWVNQYTGDEKRTRQTEWQLL
                     DWVEEVQKRGAGEIVLNMMNQDGVRNGYDLVQLKKVREVCQVPLIASGGAGEMVHFRD
                     AFIEANVDGALAASVFHKQIINIGELKEYLAKEGVEVRR"
     gene            3288..3674
                     /locus_tag="PXF40_001323"
     CDS             3288..3674
                     /locus_tag="PXF40_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5802663.1"
                     /translation="MIKITALDHLVLTVADMQKTIDFYTTILGMQEITFGDNRKALLF
                     GTQKINLHQKGAEILPNAQNADCGTADLCLLTVTPLQEVIYVLQRHQVEILEGGIVPR
                     TGAVGKIESVYCRDPDGNLIEISLYV"
     gene            3702..4340
                     /locus_tag="PXF40_001324"
     CDS             3702..4340
                     /locus_tag="PXF40_001324"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HDL5802664.1"
                     /translation="MQNKIDWQKVDGLLPVIVQNAQTCEVLMLGYMNQQALEKTLAEK
                     RVTFYSRTKQRLWTKGETSGNFLNVVDMSLDCDNDTLLILANPIGETCHTGAESCFHQ
                     FEQEQPDWIFFSKLERMIAERKNADPESSYTAKLYAKGTPKIVQKVGEEAVESVIAAM
                     KNDREELVGEVADLMYHLTVLLHNADLSWAEINAKLKERHKGIGLHPEGSNK"
     gene            complement(4414..5307)
                     /gene="hslO"
                     /locus_tag="PXF40_001325"
     CDS             complement(4414..5307)
                     /gene="hslO"
                     /locus_tag="PXF40_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HDL5802665.1"
                     /translation="MNYTKDNDKLYRYLFKDRAVRGEWVRLNNTFTETLNTHHYPKAV
                     QNLLGEMLVATSLLTATMKFNGNITVQIQGDSPLKLAVVNGNDQQQLRALARVQADIA
                     DTASLAEMIGNGVLVISIIPTDGERYQGVIALDKPTIRECLEDYFARSEQLQTHLVIR
                     TGEFEGKAVAGGMLLQIMPDGTGSRDDFEHLATLTETVKDEELFGLEAEELLYRLYHE
                     EQVEVYPPQDTEFKCGCSRERSGSALLLVPAEEIEEMLEEKQGVIDMQCECCGTQYFF
                     DKAAIEGFKEETEKLSKLGLN"
     gene            complement(5551..5967)
                     /gene="hslR"
                     /locus_tag="PXF40_001326"
     CDS             complement(5551..5967)
                     /gene="hslR"
                     /locus_tag="PXF40_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HDL5802666.1"
                     /translation="MKNKHEKEQNDAEVRLDKWLWAARFYKTRSIAKAMIEGGKVHYN
                     GQRAKVSKAVEIGAIIKLRQGNEEKEVEVLALSDQRRGAPEAQLLYSETEKSIKHREA
                     MAFARKANALSMPHPDRRPNKKERRDLIKFKEQEFS"
     gene            6055..6597
                     /gene="nudE"
                     /locus_tag="PXF40_001327"
     CDS             6055..6597
                     /gene="nudE"
                     /locus_tag="PXF40_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HDL5802667.1"
                     /translation="MIKQLPEILNIKTVAKSRIFEVQAVDLRFSNGEERTYERLTPNR
                     RSSVMVIPIQNNELIFVKEYAVGSERYELGFPKGIVDAGEEPIESANRELQEEIGFGA
                     KKLDFLRSLYSSPSHMYGLMHLFLAQDLYPSKLEGDEPEPLEIVRYPLDKIDQLLADP
                     DFAEARNLSALFMLREYLKK"
     gene            6611..7429
                     /gene="cysQ"
                     /locus_tag="PXF40_001328"
     CDS             6611..7429
                     /gene="cysQ"
                     /locus_tag="PXF40_001328"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HDL5802668.1"
                     /translation="MQTLTQPLLENIINIAKAAGEQLKQLYARSVAIKIKADCTPVTE
                     ADLIISQFLTERLKQLTPDIPVLSEEFCDIPFAERQQWQEYWIIDPIDGTQQFINRTG
                     QFSVVIALVQKREGRNQPVLGVIHAPILGKTYFSMEGSGSFLQENGEIRPLVKPKRAE
                     NALLIVTVGSDLHAEQAKNAISAPQIECVKYGSGSLKAGLVAEGKADCYIRFGDTGEW
                     DTAVAEVLLSEMGGKIFDFNFSPLTYNQRESLINPYFVMVADGSIDWDKIFLFK"
     gene            7504..8991
                     /locus_tag="PXF40_001329"
     CDS             7504..8991
                     /locus_tag="PXF40_001329"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HDL5802669.1"
                     /translation="MNAENSCIVIFGASGDLTFRKLIPALYNLYKIGRLGEHFSVLGV
                     SRSELTDESFRQKMRDALVKFEKASGEELDKFCEHLYYQAVNTSDAVDYAKLLPRLDE
                     LHDKYQTAGNTLYYLSTPPSLYGVIPECLAAHGLTTEEFGWKRIIVEKPFGYDIETAK
                     KLDVQIHKCFEEHQIYRIDHYLGKETVQNLLVLRFSNGLFEPLWNRNFIDYVEITGAE
                     SIGVEDRGGYYDGSGAMRDMFQNHLLQVLAMVAMEPPAIINANSMRDEVAKVLYCLHP
                     LTEEDVKHNVVLGQYARGTVDGKEVPAYLEEKGVPADSNTETFMAVKCKIDNWRWAGV
                     PFYVRTGKRLPTRVTEIVIHFKTTPHPVFSQNAPENKLIIRVQPDEGISMRFGLKKPG
                     AGFEAKEVSMDFRYSDLSSSSSLLTAYERLLLDALKGDATLFARTDAVHACWKFVQPI
                     LAYKANRGRVYEYESGTWGPTEADKLIARHGKVWRKPSGTMKKKV"
     gene            9131..9829
                     /gene="pgl"
                     /locus_tag="PXF40_001330"
     CDS             9131..9829
                     /gene="pgl"
                     /locus_tag="PXF40_001330"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HDL5802670.1"
                     /translation="MNKVIFPTAQAAVEQIAKEFIEYSHQNRPVHISLSGGSTPKLLF
                     KTLAQAPFNTEIQWQNLHFWWGDDRMVAPTDPESNYGEVQKLLFDHIDIPSENIHRIR
                     GEENVEQELARFSAELTACVPNLAFDWIILGMGTDGHTASLFPHQTDFNDQNVAVIAK
                     YPETGQIRISKTASLIEKAKRITYLVTGASKAEILKEIQTTPAENLPYPAAKIQAENG
                     VTEWYLDSEAANLL"
     gene            10005..10892
                     /locus_tag="PXF40_001331"
     CDS             10005..10892
                     /locus_tag="PXF40_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6N domain-containing protein"
                     /protein_id="HDL5802671.1"
                     /translation="MNPIQLIEPNINSKIFTIRGEQVMLDVHLAELYQVDTRTFNQAV
                     KRNEERFPDIFRFQLTENEWLSLRSQFVILNENSGRGQHRKYLPYVFTEQGIAMLSAV
                     LRSEVAVQVSIKIMQAFVQMRHLLQTNSGLVQRLESVERKQLEMSGQLEQVFQSLEGN
                     KPKMQGVFFEGETFNAYQFVTELVRGAKSSLILIDNYVDDTVLTLFTKRSHNVSVTIY
                     TKQISKQLALDLEKYNSQYAHINVKIFDKSHERFLIIDEKELYHIGASLKDLGKKWFA
                     FSKMDLSMSRILEKLAENQ"
     gene            10902..11591
                     /locus_tag="PXF40_001332"
     CDS             10902..11591
                     /locus_tag="PXF40_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HDL5802672.1"
                     /translation="MKTLGILGGMSAESTVSYYLDINRSVNKVLGGNSSAKILISSVN
                     FEEIVQCQKQGNWQAAAEILSEQARLLEQAGAEGILLATNTMHKIADQISSHISVPFL
                     HILDCVAEAISAQGLQKVALLGTKFTMSDNFYKDGLLERGITSIVPDEETQQEIHRII
                     FEELCLGKITESAKAFYLQTIQQLSEQGAEGVILGCTEIGLLINQNDNPLPFFDTAAL
                     HSQMAVEFILG"
     gene            11674..13128
                     /gene="gnd"
                     /locus_tag="PXF40_001333"
     CDS             11674..13128
                     /gene="gnd"
                     /locus_tag="PXF40_001333"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HDL5802673.1"
                     /translation="MSQKGDIGVIGLAVMGQNLILNMNDNGFKVVAYNRTTSKVDEFL
                     EGAAKGTNIIGAYSLEDLAAKLEKPRKVMLMVRAGEVVDQFIEALLPHLEEGDIIIDG
                     GNSNYPDTNRRVKALAEKGIRFIGSGVSGGEEGARHGPSIMPGGDESAWQYVKPIFQA
                     ISAKTDKGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFLKDGLGLSYDEMH
                     EIFKEWKNTELDSYLVDITTDILAYKDEDGEPLVEKILDTAGQKGTGKWTGINALDFG
                     IPLTLITESVFARCVSAFKDQRVAASRLFNKEIGKVEGDKKVWVEAVRRALLASKIIS
                     YAQGFMLIREASEQFGWDINYGNTALLWREGCIIRSRFLGNIRDAYEANPYLVFLGSD
                     PYFKDILENCLADWRKVVAKSVEIGLPVPCMASAITFLDGYTSARLPANLLQAQRDYF
                     GAHTYERTDKARGEFFHTNWTGRGGNTASTTYDV"
     gene            13263..13856
                     /locus_tag="PXF40_001334"
     CDS             13263..13856
                     /locus_tag="PXF40_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5802674.1"
                     /translation="MLTDQDIFNRYQTKKSEFEKQADISLIGHSLFDMWGDMENGTPN
                     LAGKTVANLGLSGTSTRQYLDVITRQERIQHVGDNVFIFLGVNDIVKEPDYSPKQVLE
                     WIGEIVDSLRKINPNANFFLLEATPVNNITTTNNAAIKELNAYFEANIPSDLTYVKTW
                     EYFADKEGNLDLTLCHDGLHFTQAGYDRLEAILTKHL"
     gene            complement(13927..16791)
                     /locus_tag="PXF40_001335"
     CDS             complement(13927..16791)
                     /locus_tag="PXF40_001335"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HDL5802675.1"
                     /translation="MTKQFTMEDRFNPSAVEQALYQHWESQGYFKPSEDINAPSYCIA
                     IPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAA
                     EEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVK
                     EVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAD
                     GLDYLVVATTRPETMLGDTAVAVHPEDERYQALIGKSVILPLANREIPIIADEYVDRE
                     FGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLSDYTAPI
                     PADYQGLERFAARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSV
                     KPLAEVATKAVEDGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGN
                     VYVARDEAEVRAKHNLPADLPLKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPT
                     DVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKG
                     NVLDPIDMIDGISLDDLLEKRTGNMMQPQLAEKIAKATRKEFAEGIVAHGTDALRFTL
                     TALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTNDKLDLSEGDVEFSLADRWIES
                     QFNRTVETFRTALSQYRFDLVANAIYEFTWDQFCDWYLELTKPIFFKGTDVQRRGASR
                     TLVNVLEKLLRLIHPVMPFITEEIWQKVKGFVGIEADTIMLQKFPQFDPLAIDETAES
                     QINFIKEVIVAVRNIRAESNIAPSKGLDLIARNFSADEVSILNANEVLLKSMAKLDSV
                     KVLENGENAPLSVAKLVANGEILIPMAGFINKEAELARLTKEMDKLKGEVARIEGKLS
                     NEAFVAKAPEQVIAKEREKMQEYLSGLEKLQVQYQEIEAL"
     gene            complement(16908..17606)
                     /locus_tag="PXF40_001336"
     CDS             complement(16908..17606)
                     /locus_tag="PXF40_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802676.1"
                     /translation="MKQNRKKSKKVIGTHKKENGLKQFIKNNKIPIILISAIWSIFTT
                     DILERIANMPIIWKNFEENYLYNKKLDGLWSTNTNYIIDYKLLNIPEEQPNVIIEFMV
                     NKDDNSILGEMTSTALCELIPLTWSFRLESPKPTLLNLIFDRELKLSYLVSGGYTELS
                     TFKIKEINSNLGTLTLTTQEDKTGIFPPTIKLINFSSNIEDDIKEIEQSCLNSRKQLW
                     EKRRKMQEEQKIPN"
     gene            complement(17851..18444)
                     /locus_tag="PXF40_001337"
     CDS             complement(17851..18444)
                     /locus_tag="PXF40_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802677.1"
                     /translation="MHNNLAIFYCGTNGAGKSTLRSFNQDKVEIVIDSDNIAMQINPL
                     NPRLADIEAGRKAIELFQFAVKNQVAFSMESTLSGKSILKRMENAKAGYFKTRLNYIG
                     VDSYKINIARVKARVKAGGHFIDEETIRKRYHISRENLIEAIFINDETLIYDNSETKP
                     NLILQIADKKVIKISDKIPNWCNQLCDELVELGFKTT"
     gene            complement(18434..18604)
                     /locus_tag="PXF40_001338"
     CDS             complement(18434..18604)
                     /locus_tag="PXF40_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802678.1"
                     /translation="MTSREELLKKQRELDILFTAWFEEKKKHEVLTYRRENGDLIQHY
                     PDGTEKVIEYAQ"
     gene            complement(18606..19348)
                     /locus_tag="PXF40_001339"
                     /pseudo
     CDS             complement(18606..19348)
                     /locus_tag="PXF40_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250915.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
     gene            complement(19345..19788)
                     /locus_tag="PXF40_001340"
     CDS             complement(19345..19788)
                     /locus_tag="PXF40_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5802679.1"
                     /translation="MLKNLSWRAKRFDELSTQELFEIYHARTAVFVVEQNCPYQEVDN
                     KDLQAVHFFTKNAKNLTAYCRLIPANDGVHIGRVLVVKENRGSGLARELVQKAMDYCG
                     EHFPAQPIHAQAQSYLQGFYESFGFKAVSEVYLEDGIAHLDMVLE"
     gene            complement(19782..20219)
                     /locus_tag="PXF40_001341"
     CDS             complement(19782..20219)
                     /locus_tag="PXF40_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HDL5802680.1"
                     /translation="MKQVQFYLLSQADAAELSAAEMQACELAAQAWRLGKRVLIACET
                     EQQALNIDEALWARDPDSFVPHNLSGEITTYPTPIEISWKGKRNAQRRDLLISLQTQL
                     PEFIGSFTQIIDFVPVEETAKAQARDRYKQYRQLGWQLETIQC"
     gene            20458..20901
                     /gene="lysM"
                     /locus_tag="PXF40_001342"
     CDS             20458..20901
                     /gene="lysM"
                     /locus_tag="PXF40_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein LysM"
                     /protein_id="HDL5802681.1"
                     /translation="MGLFDFVGDIGRKLFNKEEDASKAVTEHLAEDNPGVENVNVTVE
                     NGVAKISGIASTAAAVEKAVLMAGNVAGITEVNIDEVTLPDDVQLASDDELYVIQKGD
                     TLWEIATKAYGNGAKYKAIVEANKEVIKDENKIFPGQKIRIPKGL"
     gene            complement(20955..21806)
                     /locus_tag="PXF40_001343"
     CDS             complement(20955..21806)
                     /locus_tag="PXF40_001343"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HDL5802682.1"
                     /translation="MKQYLDLCNRIVSEGKWVANERTGKHCLTVINADLTYDVEKGEF
                     PLVTTRRSYWKAAIAELLGYIRGYSNAADFRQLGTKSWDANANENAQWLANPYRKGED
                     DMGLVYGAVGRNFPKPDGGSVDLLRQIVDDLKKGIDNRGEIYTFYHPGAFHMGCLRPC
                     LHSHHFSLLDGTLYLNSTQRSADVPLGLNWNMIQCYTFLALMAQITGHKAGQAFHKIV
                     NAHIYEDQLELMRDVQLKREPLNAPKLIINPDIKSLEDLETWVSLDDFKVEGYEYHPA
                     IQYPFSV"
     gene            21899..22450
                     /locus_tag="PXF40_001344"
     CDS             21899..22450
                     /locus_tag="PXF40_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802683.1"
                     /translation="MKGIMKSILVFSTAVFLAACSSNKSGWTRLNDNDVDQKSYAIAY
                     GATAQTYADRVNESYDINSFMNGVNDWYTKKVTLPIEQIRAITINRMLDHNVYAYYSG
                     VIYAADLQANFNHLDPNCWGLVQPASMTQGIHDAMLDLQKNKVRGDEYIKNGVEQILH
                     LCVKTIAEDENESQSKGKTKKHK"
     gene            22659..22753
                     /locus_tag="PXF40_001345"
     tRNA            22659..22753
                     /locus_tag="PXF40_001345"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22694..22696,aa:Ser,seq:gct)
     gene            22767..22843
                     /locus_tag="PXF40_001346"
     tRNA            22767..22843
                     /locus_tag="PXF40_001346"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22801..22803,aa:Arg,seq:acg)
BASE COUNT         6558 a         4654 c         5087 g         6612 t
ORIGIN      
        1 ataagaaagc ttttgaagga aacagatata ttgagtcaat tttacttcac tataagaaat
       61 acttaactca ggaaactaaa tgaccaacct caccatcatc gacacaggct gtgccaacct
      121 gtcttcggtc aaatttgctt ttgaccgtct tggcattcgg gctgagatct cgcgagatct
      181 caacaaaatc caatctgccg ataaattgct actccccggt gtgggaacag cagcggcggc
      241 gatggcgatc ttgcacgatc gccgacttat cgacaccatt cgcaacgcca cccagccgat
      301 gcttggcatc tgcttaggaa tgcagttaat gacggacttt tcccacgaag gcgatgtggc
      361 aacactgaac ttaatgagtg gcaaaaccga acgcttgcct gaatgcggtt tgccgttgcc
      421 gcatatgggc tggaacaagg tgcaatacca agccgaccat ccgctatttc acgacattga
      481 gcaaggcaat catttctatt ttgtgcatag ctacggtgtg ctaccgaatg agaacaccat
      541 cgccacctgc gactacggcg tgccgttttc cgctgccatt gccagccaaa acttctacgg
      601 cgtacagttc caccccgagc gttcgggcga ggctggggcg aagttgctca ggaattttgt
      661 ggagaatgtc tgattttgtg atctcgatcg aaaagtttga aaatagggct tgatttctcg
      721 ctttatttcg acaaaattac tgttaattta accagtgaaa gaaggtgaga aatgaacgaa
      781 attaaactat ttgaaaacag ccaaatccgc tcggtgtggg atagcgaaaa agaagagtgg
      841 tttttctcgg tggtggacat tatcgaggtg ctgacgcaaa gtagcaatcc acgccgttat
      901 tggagtgatt taaagcggaa aatcaaggac gaagagggcg gaattgaact gtacgaaaaa
      961 atcgtacagt tgaaattaaa agccccagac ggaaaaatgc gggaaaccga tgccacggat
     1021 ttacaaggca ttttccgtat tattcagtct gtgccaagcc cgaaagccga gccgttgaaa
     1081 atgtggctgg cagaggtagg caaagagcgg attgatgaga ttatcgatcc tgaattgacc
     1141 attgaccgag ctttggctac ttacttgaaa aagggatatt cccgtgagtg gattaaccaa
     1201 cgcttgcaag ccattcaggt gcgaaaagaa ctgacggata cttggcaaga tcacggtgtg
     1261 caagtgggca gagaatttgc gattctcacc aatgaaatca cacaggcgtg gagcggtatg
     1321 actactcgcc aatataagga tttcaaaggg ctgaaaaagg aaagtctgcg agacaatatg
     1381 acgaccaccg agttggtgct gaatatgctt gctgaggctg ccaccaaaga catcgctcaa
     1441 atcagccacc cacagggctt ggaagaaaat aaaaccgttg ccaaacgggg cggaaatgtt
     1501 gcaaaagtgg ctcgggaaag tttggaggca gagaccggca aaccggtgat tacgcaacaa
     1561 aatgcgattg atttcgctgc ggtgattgaa caagtggcga aacaggtgaa gaaataagtg
     1621 cggtcggttt tttgcaagtt tttggaagaa tttgaccgct tgtaccccat acgagccgta
     1681 tggggctaga taaaccaagc tactccgtag cttagagagg cagtcgcagc gcgactggga
     1741 ttattcagcc tagcacggct cgtgctaggc acacaggaac aataatatgc aaaaatccat
     1801 cattatcccc gccctcgacc ttatcgatgg gcaagtagtt cgcctacatc agggcgatta
     1861 tgcgaaacag acgacttatg ccgatgaccc gattgcccaa tttgccgact acttggcaca
     1921 aggggcggag cagttacatt tggtcgatct tacaggggcg aaaaatccgg ctcaaagaca
     1981 gaccgcactt atcggcaaaa ttattcgtga aacccactgc aaaattcaag tgggcggcgg
     2041 tatccgcacc gagcaggatg tggcggattt acttgctgtt ggagcaaacc gtgtggtgat
     2101 tggttcgact gcggtaaaag agcgtgaaat ggttaaaggc tggttcaaaa agtacggtgc
     2161 ggagaaattt gtgctggcac tggatgtgaa cattgatgca atcggtcaaa aaatcattgc
     2221 gatgagcggc tggcaagagg caagtggtgt gtcgctcgag gagttgattg aagattatca
     2281 aaccgtgggc ttgcaacacg ttttatgcac cgacatttcc cgagacggca cgctggcagg
     2341 ttcaaatgta gatctctatc gagaaatctg tgccaaatac ccagagattc aatttcagtc
     2401 ctcaggcggt atcggctcgc ttgccgacat caaagcgctt tgtggtacgg gcgtggctgg
     2461 cgtgattgtc ggtcgtgcgt tgttggaagg taaatttaat gtagcggagg caatcgaatg
     2521 ttggcaaaac ggataattcc ttgtttagac gtgcgtgacg ggcaagttgt gaaaggcgtg
     2581 cagttccgca accacgaaat catcggcgac attgtgccac tcgcccagcg ttatgcccaa
     2641 gagggggcgg atgagttggt gttttacgat attaccgcct caagtgacag cagaacggtg
     2701 gataaaagct gggtggaacg tgtggcacag gtgattgata ttccgttctg tgtggcaggc
     2761 ggaatcaaaa ccattgccga tgcggagcag attttcgctt tcggagcgga caaaatctcc
     2821 atcaattccc cagcccttgc caaccccgag ctgattaccg aactggcaaa gcgctttggc
     2881 gtgcaggcgg tggtggttgg tattgatagc tggttcgagg cagaaaccgg caaatattgg
     2941 gtcaatcaat ataccggcga tgaaaaacgc acccgccaaa ccgaatggca attgttggat
     3001 tgggtggagg aagtgcaaaa gcgaggagca ggcgaaatcg tgctgaatat gatgaaccaa
     3061 gacggcgtac gcaacggcta cgatttggtg caactgaaaa aagtgcgtga agtttgccaa
     3121 gtcccactca tcgcctcagg cggtgcaggc gaaatggtgc atttccgtga tgcttttatt
     3181 gaggcaaatg tggatggtgc gttggcagcg agtgtgtttc ataaacaaat tatcaatatt
     3241 ggggagttga aggaatattt ggcgaaggaa ggggttgagg tgcgtagatg attaagatta
     3301 ctgccttaga tcatctggtt ttaaccgttg ccgatatgca aaaaaccatt gatttttata
     3361 cgaccatttt gggtatgcaa gaaatcacct ttggcgataa tcgcaaagcg cttttgtttg
     3421 gcacacagaa aatcaacctc caccaaaaag gtgcagaaat cctacccaat gcccaaaatg
     3481 ccgattgtgg cacggcagat ttatgcctct taacggtaac tccacttcag gaggttatct
     3541 atgtgttaca gcgacatcag gtggagattt tggaaggtgg gattgtgcct cgtacggggg
     3601 cagtgggaaa aattgagtcg gtttattgcc gtgaccctga tggtaatttg attgaaataa
     3661 gcctatatgt ctaaacaagc ggtcaaaaaa aggaagaaaa aatgcaaaat aaaatagact
     3721 ggcaaaaagt ggacggctta ctgcccgtta tcgtccaaaa cgcccaaacc tgcgaagtac
     3781 tgatgttagg atatatgaac caacaagccc tcgaaaaaac gctggctgaa aagcgagtga
     3841 ctttttactc ccgtactaaa caacggctgt ggacgaaagg cgaaacctcg ggcaatttcc
     3901 taaacgtggt ggatatgagt ttggattgtg ataacgacac cctgttaatc ctcgctaacc
     3961 ctatcggcga aacctgccat acgggggcgg agagctgttt tcatcagttt gaacaagaac
     4021 aaccagattg gatctttttc agcaaattag aacgaatgat agccgaacgt aaaaatgctg
     4081 atccggaaag ttcttatacc gctaaacttt acgccaaagg cacgccaaaa atcgtccaaa
     4141 aagtagggga agaggcagta gaaagcgtga ttgcggcaat gaaaaatgat cgggaagagt
     4201 tggtcggtga agtggctgat ctgatgtatc acttaacggt gttattgcac aatgccgatc
     4261 tctcgtgggc agagatcaat gctaaactaa aagaacgcca caaagggatt gggttacacc
     4321 cagaaggctc aaataagtaa aatgcaagcg gtcaaatttc accgtttttt tacaaattgc
     4381 aaaaaagaca agaaacttga ccgcttgttt agcttaattt aaccctaact tacttaattt
     4441 ttcagtttct tccttaaagc cttcaatcgc cgctttgtca aagaaatatt gtgtcccgca
     4501 gcattcacat tgcatatcga tcacgccttg tttttcctcc aacatttctt cgatttcttc
     4561 tgccggcacc agtaataatg cggagcctga acgctctctt gagcagccac atttaaattc
     4621 agtatcttgt ggtgggtaaa cttctacttg ctcttcgtgg tagaggcgat agagcaattc
     4681 ttctgcctct aaaccaaata actcttcatc ttttacggtt tcagtgagcg tggctaaatg
     4741 ctcaaaatca tctcttgagc ctgtgccgtc cggcataatt tgtagcaaca taccgcctgc
     4801 cactgctttg ccttcaaatt cgcctgtgcg gataacgagg tgggtttgta attgctcgga
     4861 gcgggcgaag taatcttcta aacattcacg aatggttggt ttatcgagag caatcacccc
     4921 ttgataacgt tcaccatcgg ttgggataat agaaatcact aatacaccat tgccgatcat
     4981 ttccgctaac gaggctgtgt ctgcaatatc tgcctgaaca cgggctaaag cacggagttg
     5041 ctgttggtcg ttaccgttca caaccgccaa ttttaacggg ctgtcacctt gaatctgcac
     5101 agtaatgttg ccgttaaatt tcattgttgc agtcagcaaa ctggttgcga ctaacatttc
     5161 tccgagtaaa ttttgtactg ctttagggta gtgatgggtg tttaaggtct cggtaaaggt
     5221 gttgtttaaa cgcacccatt cgccccgtac cgctcggtct ttgaataaat agcggtagag
     5281 tttgtcattg tctttggtgt aattcatttt gattcctcgt tgcaagcggt cgattattac
     5341 tcacaaaatt atttctaatt ttgttcgctc ctacggagcc gttggcaaag ccaacgttca
     5401 aaatgcattg cattttgtgg ctaaaaatgt gcaaatcgaa cgctgtaggg gcgaatcaat
     5461 gttcgcccga aataattata taggggcgaa aaatttttcg cccctactta ggatattcaa
     5521 tatagggatt atttttctga ttgcaagggc ttagctaaat tcttgctctt tgaatttgat
     5581 taaatcccgc cgttcttttt tgtttggacg gcgatcaggg tgtggcattg aaagagcatt
     5641 cgctttgcgg gcaaatgcca ttgcctcacg gtgtttaatg cttttttcgg tttcactgta
     5701 gagcagttgg gcttccggag cccctcggcg ttggtcactg agggctaaca cttccacctc
     5761 tttttcttca ttgccttggc gaagtttgat gatggcaccg atctccaccg ctttgctaac
     5821 tttagctctt tgcccattat aatggacttt acccccttca atcattgctt tggcaatcga
     5881 acgggtttta taaaaacgag ccgcccaaag ccatttatct agccgaactt cggcgtcgtt
     5941 ttgttctttt tcgtgtttat ttttcatttt ctgccttaaa atcaaaacaa tagtcgaaat
     6001 attagagcga aagtgagatt tttcaactaa aataactcaa aaaggtgaga taaaatgata
     6061 aaacaacttc ctgaaatttt gaacattaaa acagtagcga aatctcgcat ttttgaggtg
     6121 caagcggtcg atttacgctt ttctaatggc gaagagcgaa cttacgaacg acttacgccg
     6181 aatcgccgtt cttcggtaat ggtgattccg attcaaaaca acgagctgat ttttgtgaaa
     6241 gagtatgcgg tcggctcgga gcgttacgag ctgggttttc cgaaaggcat tgtggatgca
     6301 ggtgaagagc cgattgagag tgcgaaccgt gaattacaag aagaaattgg ttttggggcg
     6361 aaaaaattag attttctgcg gtcgctttac agttcgccaa gccatatgta cggcttaatg
     6421 cacctgtttt tggcacaaga tctgtaccca tcaaaattgg aaggcgatga gcctgaaccg
     6481 ctggaaattg tgcgttatcc gttggataaa attgatcaat tattggcaga tcctgatttt
     6541 gccgaagcac ggaatttgtc cgctctattt atgctacgag aatacttaaa aaaataggca
     6601 aggagctatt atgcaaacgc taactcaacc cctactcgag aatattatca atattgccaa
     6661 agcagccggt gagcagttaa agcagcttta tgcccgctcg gtggcaatta aaatcaaagc
     6721 cgattgcaca ccggtgacgg aagcggatct gattatcagc caatttttaa ctgaacgctt
     6781 gaagcaactc acaccagata ttccggtatt atcggaagag ttttgcgata ttccgtttgc
     6841 cgaacgccaa caatggcaag aatattggat tatcgacccg attgacggca cacaacagtt
     6901 tattaaccgc accggtcaat tttcagtggt gattgcgtta gtgcaaaaac gtgagggtag
     6961 aaatcagccg gtgctgggcg ttattcatgc tccgatatta ggaaaaacct attttagtat
     7021 ggaaggtagc ggtagctttt tgcaagaaaa tggagaaatt cgaccgcttg tcaaaccgaa
     7081 acgtgcggag aatgcccttt tgattgttac cgtaggcagc gatttacatg cagaacaagc
     7141 taaaaatgcc atttcagccc cacaaattga gtgtgtaaaa tatggttcgg gcagtctaaa
     7201 agccggttta gtggcagaag ggaaagccga ttgttatatc cgttttggtg acaccggcga
     7261 atgggatact gctgtggcag aagtgctgtt aagtgaaatg ggcggcaaaa ttttcgactt
     7321 taatttttcg ccgctgactt ataatcagcg agaaagtttg attaatcctt attttgtgat
     7381 ggtggctgac ggctcgatag attgggataa aatattttta ttcaaatagg tagttccgat
     7441 tagcaatttt tatgataatc ttgcacccaa caaaatttta acaattagca ataggataaa
     7501 taaatgaatg ctgaaaatag ctgtatcgtc atttttggtg cttccggtga cttaactttt
     7561 cgtaaattaa ttcctgctct ttataactta tataagattg gcagattggg cgagcatttt
     7621 tccgtcctag gtgtttctcg ttcagaatta accgacgaat ctttccgcca aaaaatgcgt
     7681 gatgcgttag tcaaatttga aaaagcaagc ggtgaagaat tagataaatt ttgcgaacat
     7741 ctttattacc aagctgtaaa tacctctgat gcagtggatt atgccaagtt gctgcctcgt
     7801 cttgatgagc tacacgataa atatcaaaca gccggtaaca cgctttatta cctctccacg
     7861 ccaccaagtt tatatggcgt gattccggaa tgtttagccg ctcacggctt aactaccgaa
     7921 gagtttggct ggaaacggat tattgttgaa aaaccattcg gctacgatat cgaaaccgcc
     7981 aaaaaattag acgtacaaat ccacaaatgc tttgaagagc atcaaatcta ccgtatcgac
     8041 cactatttag gtaaagaaac ggtacaaaac ttactcgttt tacgtttttc taacggctta
     8101 tttgaaccgc tttggaaccg taattttatt gattatgtgg aaattaccgg ggcagaatcc
     8161 atcggcgttg aagatcgtgg cggttactat gatggctcgg gggcaatgcg tgatatgttc
     8221 caaaaccact tattgcaagt attagccatg gttgcaatgg agccaccggc aattattaat
     8281 gctaattcaa tgcgtgatga agtcgcaaaa gtgctatatt gcttgcatcc gttaactgaa
     8341 gaagacgtta aacacaatgt ggtgttaggt cagtatgctc gtggcacggt agacggcaaa
     8401 gaagtgccgg cttacttgga agaaaaaggc gtgccggctg attccaacac tgaaaccttt
     8461 atggcggtaa aatgtaaaat cgataactgg cgttgggcag gtgtgccgtt ctatgtgcga
     8521 accggtaaac gcttaccaac ccgtgtgacg gaaatcgtaa ttcattttaa aactacacca
     8581 cacccggtat ttagccaaaa tgctccggaa aataaattga ttattcgtgt gcaaccggac
     8641 gaaggcattt caatgcgttt cggcttgaaa aaaccgggag caggctttga agcgaaagaa
     8701 gtctcaatgg atttccgcta ttctgattta agttcatcat caagcttact caccgcttat
     8761 gaacgcttac tattagacgc acttaaaggt gatgcaacct tatttgcccg tactgatgct
     8821 gtacacgctt gttggaaatt tgtgcaaccg attttagcct acaaagctaa tcgtgggcgt
     8881 gtgtatgaat atgaatccgg cacttggggg ccaaccgagg cagataaatt aatcgccaga
     8941 cacggcaaag tatggcgaaa accgtccggt acaatgaaga agaaagtgta aatttcagtt
     9001 cccctcttta gcaaagaggg gctaggggag atttggcaga agttatatac gctcatacga
     9061 aatattgaaa tcgtaatcaa atctccccct cccctctttt ctaaagaggg gtgatctaac
     9121 gaggcaaatt atgaataaag ttattttccc caccgcccaa gctgcggttg aacaaattgc
     9181 taaagagttt attgaataca gccatcaaaa ccgcccggtg catatttccc tttccggtgg
     9241 ttcaaccccc aaattattat tcaaaacctt agctcaagca ccgtttaata ccgaaattca
     9301 atggcaaaac ctgcatttct ggtgggggga tgatcgaatg gttgccccaa ccgatcccga
     9361 aagtaactac ggcgaagtgc agaaattact gttcgatcac atcgacattc caagcgaaaa
     9421 tattcaccgc attcgtggtg aagagaatgt agaacaagaa cttgcaagat tttcggcaga
     9481 attgaccgct tgtgtgccga acttggcgtt tgattggatt attttaggaa tgggaacaga
     9541 cgggcatacc gcctcactgt tcccacatca aacagatttt aatgatcaga acgttgccgt
     9601 gatcgccaaa tacccagaaa cagggcagat ccgcatttcc aaaacggcat ctttaattga
     9661 aaaagccaaa cggatcactt acttggtcac aggagcaagc aaagcggaaa ttttaaaaga
     9721 aatccaaacc actccggcag aaaatttacc ttatcctgcc gccaaaattc aggcggaaaa
     9781 tggggtaacg gaatggtatt tggatagtga ggcggctaac ttactctagg tcacaatcag
     9841 tgacctttac aagcggttaa attttagaaa aatgttgcaa agtatttttg tgatattcat
     9901 cgaaaaagca gaaaaatctg ctcgtggtat aggccaaaaa ttggcatagt ctttcttatt
     9961 ttgagatcac aaaagtgatc ttcactgaag aataaggaag aaagatgaat ccaattcaat
    10021 taattgaacc aaacattaac tctaaaattt ttactattcg tggcgagcaa gtaatgctag
    10081 atgttcattt ggcagagctt tatcaggtag atactcgaac ctttaaccaa gcagtaaaac
    10141 ggaatgaaga gcgatttcct gacatatttc gttttcaatt aacagaaaac gaatggctat
    10201 ctttaagatc acaatttgtg atcttaaacg aaaatagtgg gcgtggccaa cataggaaat
    10261 atcttcctta tgtctttacc gagcaaggca ttgcaatgct ttcggcagta ttgcgtagtg
    10321 aagttgcggt gcaagttagc attaagatta tgcaagcctt tgtgcaaatg cgtcatcttt
    10381 tgcaaacaaa tagtggtttg gtacaacgct tagaaagtgt agagcgtaaa cagttggaga
    10441 tgtctgggca gttagagcag gtgtttcaat ctcttgaagg caataagcct aaaatgcaag
    10501 gggttttctt tgaaggtgaa acctttaacg cttatcagtt tgttacggaa ttagtgagag
    10561 gtgcaaaatc atcgctgatt ttaattgata actatgtaga tgataccgtt ttaactttat
    10621 ttacgaaacg atcgcataac gtatcagtta cgatttatac gaaacaaata tctaagcaac
    10681 ttgcattaga tttggaaaaa tataacagcc aatatgctca cattaatgtg aaaatatttg
    10741 ataaatctca cgagcgattt ttgattattg atgaaaaaga gctttatcat atcggtgcat
    10801 cacttaaaga tttaggtaag aaatggttcg ctttttctaa aatggattta tcaatgagcc
    10861 gcattttaga aaagttagcg gaaaatcaat aaggtatatt aatgaaaaca ctcggcattt
    10921 taggtggaat gagtgcggaa agcacggttt cttattattt agatattaat cgctcggtga
    10981 ataaagtatt aggtggaaat agcagtgcca agattttaat ttcgagtgtc aattttgaag
    11041 agattgtaca atgccaaaag cagggaaatt ggcaagcagc cgctgaaatt ttatctgaac
    11101 aagctagatt gctagaacaa gccggagcag aaggcatttt attggcaacc aacacaatgc
    11161 acaaaattgc cgatcaaatt agtagccata tctctgtgcc gtttttgcat attttggact
    11221 gtgtggctga ggcgatttca gctcaaggtc tgcagaaagt agcactcctt ggcacaaaat
    11281 ttactatgag tgataatttt tacaaagacg gtttattgga gcgtggtatc acatcaatag
    11341 taccagatga ggaaacgcaa caagaaattc atcgcattat tttcgaggaa ctctgtttag
    11401 gcaagattac tgaaagtgcc aaagcgtttt atcttcagac tattcaacaa cttagtgaac
    11461 aaggtgcaga aggtgtgatt ttaggttgta ccgaaatcgg gttgctgatt aaccaaaacg
    11521 acaatccgtt accgtttttc gatacagcag cattacacag ccaaatggcg gtggagttta
    11581 ttttaggtta ataaatgtta caagcggtca aatttgcaaa aaattttacc aattcgaccg
    11641 cttgcataga atcaaaaaca ataggagcaa acaatgtcac aaaaaggcga tatcggcgtg
    11701 attggactcg ccgtaatggg tcaaaattta attttgaata tgaatgacaa cggctttaaa
    11761 gtggtggcgt acaaccgcac tacttcaaaa gtggatgagt tcttagaagg tgcggcgaaa
    11821 ggcacgaaca ttatcggtgc ttactcgtta gaagatttag cggcgaagtt ggaaaaaccg
    11881 cgtaaagtga tgctaatggt gcgtgccggt gaggtggtgg atcagtttat cgaggctctt
    11941 ctgccacatt tagaagaagg cgacatcatc attgatggcg gtaactcaaa ctatccggac
    12001 accaaccgcc gtgtgaaagc gttagcggaa aaaggcattc gctttatcgg ctcaggtgta
    12061 tcgggcggcg aagagggtgc tcgtcacggg ccgtcaatta tgccgggcgg tgatgaatct
    12121 gcgtggcaat atgtgaagcc gattttccaa gcaatttcag ccaaaaccga caaaggtgag
    12181 ccttgttgtg actgggttgg tcgtgacgga gcagggcatt ttgtgaaaat ggttcacaac
    12241 ggtatcgaat atggcgatat gcagttaatt tgtgaagcct accaattctt aaaagatggt
    12301 ttaggtttaa gctatgatga aatgcacgaa atctttaaag agtggaaaaa caccgaatta
    12361 gacagctatt tggtggatat taccactgat attcttgcct acaaagacga agacggcgag
    12421 ccattggtag agaaaattct cgacaccgca ggtcaaaaag gaacgggtaa atggactggt
    12481 attaacgccc ttgatttcgg cattccatta acactgatta ccgagtcggt attcgcccgt
    12541 tgcgtatctg cgtttaaaga tcaacgtgtt gcggcttcaa gattgtttaa caaagaaatt
    12601 ggtaaagttg aaggcgacaa aaaagtatgg gtagaagcgg tacgccgtgc gttacttgct
    12661 tccaaaatca tctcttatgc acaaggcttt atgttgattc gtgaggcttc tgagcaattc
    12721 ggttgggaca tcaactacgg caataccgcc ctattatggc gtgaaggttg tattatccgc
    12781 agccgtttct taggcaacat tcgtgatgcg tatgaagcca acccatattt agtgttctta
    12841 ggctcagacc catacttcaa agatattttg gaaaactgct tggcagattg gcgtaaagta
    12901 gtggcaaaat cggtggaaat cggtttacct gtaccttgta tggcgtcagc cattaccttc
    12961 ttagatggct acacctcggc acgtttaccg gcaaacttac tccaagcaca acgtgactac
    13021 tttggtgctc atacttatga gcgtacagac aaagctcgcg gtgagttctt ccacaccaac
    13081 tggacaggac gtggcggtaa taccgcatcg accacttatg atgtgtaatt aatctttttg
    13141 agccacttaa ttcgatatta agtggctttt ttattggatt tttcttcaaa atatcttgga
    13201 gtgaatgttt acaagtttgt ataataatgg agcgattttt catttatatt taaggagaac
    13261 ctatgcttac cgatcaagat atttttaatc gctaccaaac aaaaaaatca gaatttgaaa
    13321 aacaggcaga tatttccctt attgggcatt ccctgtttga tatgtggggc gatatggaaa
    13381 acggcacgcc gaatttagca ggaaaaacag ttgccaattt gggcttatca ggcaccagca
    13441 cccgccaata tttggatgtg attacccgac aagagcgaat tcaacacgtt ggcgataatg
    13501 tatttatttt tctaggcgtt aatgacattg taaaagagcc ggattactcg ccaaaacaag
    13561 tgttagagtg gattggcgaa attgtggatt ctcttcgcaa aattaatcca aatgccaact
    13621 tttttctatt ggaagccaca ccggttaata atattaccac caccaataat gctgcaataa
    13681 aagagctcaa tgcgtatttt gaggcaaata ttccatctga tttgacttat gtaaaaacgt
    13741 gggaatattt tgctgacaaa gaagggaatt tagatctaac tttatgccac gatggattac
    13801 acttcaccca agcaggctat gaccgcctag aggcgatttt aaccaaacat ttataatgaa
    13861 aagcttcaat aagcaagcgg tctgaattag caaaaaattt ccaaatcctg accgcttgtt
    13921 agttaattac agtgcttcaa tctcttgata ctgcacctgc aatttctcta atccactcag
    13981 gtactcttgc attttttcac gctctttggc gatgacttgc tctggggctt tggcgacaaa
    14041 ggcttcgttt gaaagtttgc cttcaatgcg agccacttca cctttaagtt tatccatctc
    14101 tttggtgagg cgagctagct cagcttcttt gttgataaag cctgccattg ggatcaagat
    14161 ctcaccattt gcgaccagtt tcgctaccga tagcggtgca ttttcaccat tttccagcac
    14221 tttcacgcta tcaagttttg ccatcgattt gagcaacact tcgttagcgt tgagaataga
    14281 gacttcgtcc gcagagaaat tacgagcgat taaatctaaa cctttgcttg gtgcgatgtt
    14341 gctttccgca cgaatgttac gcaccgccac aatcacttct ttgataaagt tgatttgact
    14401 ttcggcggtt tcatcaatgg caagcgggtc aaattgtggg aatttttgca acataatggt
    14461 atcggcttca atacctacaa agcctttcac tttctgccag atttcttcgg tgatgaacgg
    14521 cattactggg tggattaaac gcaggagttt ttccaataca ttcaccagcg tgcgacttgc
    14581 gccacggcgt tgtacatctg tgcctttgaa gaaaataggt ttggtcagct ctaaatacca
    14641 gtcgcagaat tgatcccaag taaattcgta gatcgcattt gccactaagt cgaaacggta
    14701 ttggctgagt gcggtgcgga aagtttccac cgtgcggttg aattggcttt caatccaacg
    14761 atcggcaagg ctaaattcca cgtcgccttc gcttaaatcc aacttgtcat tggtcagcac
    14821 ataacggctc gcattccaca gtttgttgca gaagttgcgg tagccttcta aacgtttcat
    14881 atcccagttg atgtctcgac cgttgctggc aagggcggtg agggtgaaac gcagagcgtc
    14941 tgtgccgtgt gccacaatcc cttcggcaaa ttctttgcgg gttgccttag cgattttttc
    15001 tgccagttgt ggctgcatca tattacctgt acgtttttcg agcaaatcgt cgagactgat
    15061 gccgtcaatc atatcaatcg ggtctaacac gttccctttc gatttcgaca ttttctgccc
    15121 ttgctcgtca cggatcaagc ctgttacata cacggttttg aacggcactt gcggtttgcc
    15181 gttttcatct ttgatgaagt gcatcgtgaa cataatcata cgagccaccc agaagaagat
    15241 gatgtcaaaa ccggtaatca gcacatcggt cgggtggaac attttcagtt ctttggtttg
    15301 ttctggccag cctaacgttg agaacgtcca tagaccagac gagaaccaag tatccagtac
    15361 gtcttcatct tgctttaatg gtaagtccgc aggtaagttg tgtttcgcac gcacttccgc
    15421 ttcatctcgt gctacataaa cattgccctg ctcgtcatac cacgctggaa tgcggtgtcc
    15481 ccaccataat tggcgagaga tacaccagtc ttgaatatca cgcatccaag agaaatacag
    15541 gttttcgtac tgtttcggca cgaattggat ttcgccgtct tccaccgctt tggtcgcgac
    15601 ttccgccaaa ggtttgacag acacatacca ttggtcggtc agcatcggct caatcggcac
    15661 gccaccacgg tcgccatacg gcacttttaa gtcgtgtggt ttgatttgat ctaacagccc
    15721 aagagcttca aaatctgcca caattttctt acgcgcggca aaacgctcta agccttgata
    15781 gtcggcagga attggggcgg tgtagtcgga aagcggttta ccgtctgtgc cgataatttc
    15841 ggcctctgca cgaatatcgg catttaaggt catcacattc accatcggca agccgtggcg
    15901 tttgcccact tcgtagtcgt tgaaatcgtg ggcaggggtg atttttacca cgcccgtacc
    15961 gaactcacga tccacatact catcggcaat aatcgggatt tcacggttgg caagcggtag
    16021 gattacgctt ttgccaatca gagcttgata acgctcatct tcagggtgaa ccgccaccgc
    16081 agtatcgccc aacatcgttt caggacgggt cgttgccacc actaagtaat ccaagccgtc
    16141 tgcggttttt gcaccattag ccagcggata gcggaaatgc cacagcgagc ctttgctttc
    16201 tttgttttcc acttccaagt cagaaatcgc agtatgcagt ttcggatccc agtttacgag
    16261 gcgtttgcca cggtaaatca agccttcttc gtgcaagcga acgaacacct cttttaccgc
    16321 attggataag ccttcgtcca tcgtaaaacg ctcacgatcc cagtcaatcg agttgcctaa
    16381 gcgacgcatt tgctggctga tcgtgccgcc cgaataggct ttccaatccc agattttgtt
    16441 gataaaggct tcacgcccat aatcgtggcg ggttttacct tcttccgctg cgattttacg
    16501 ctccaccacc atctgagtgg caatccctgc gtggtcagtt cctgtttgcc aaagggtatt
    16561 gttgccctcc atacggttaa aacgaatcag cgtatccatc aaggtttgct ggaaagcgtg
    16621 ccccatatgc aaactccccg tcacattcgg cggcggaata gcgatacagt agctcggtgc
    16681 attaatatct tcactcggct taaaatagcc ttgcgattcc cagtgttggt agagcgcttg
    16741 ctctacagcg gaagggttaa aacggtcttc cattgtgaat tgttttgtca ttggttttgt
    16801 tttctcttgt ttaataattt tttcactagc ttaatcttat aaaaaagatc tttgccgtaa
    16861 atgcttttat aggtaattag ttatttaaat taaggtcaac taaaagatta attgggaatt
    16921 ttttgttcct cttgcatttt tcttcgtttt tcccataatt gctttcggct atttaaacag
    16981 ctttgctcaa tctctttaat atcatcttct atattggatg aaaaattgat taatttgatt
    17041 gtcggaggaa atataccggt tttatcttct tgcgtagtta atgttagtgt tcctagatta
    17101 ctgttaattt ctttaatttt aaatgttgat agctcggtat atcccccact aacaagataa
    17161 ctcaatttca actctctatc gaaaataaga tttaataatg ttggcttagg gctttccaat
    17221 ctaaaactcc aagttagagg tattaactca cacagagctg ttgaagtcat ttcccctaaa
    17281 atcgaattgt catctttatt aaccataaat tcaatgataa catttggttg ctcttcaggt
    17341 atgttcaata atttatagtc gataatgtaa tttgtatttg tagaccataa accatccagt
    17401 tttttattat ataggtaatt ctcctcgaaa tttttccaaa taataggcat gtttgcgatg
    17461 cgttctaaaa tatcagttgt gaagatactc catatggcag atataagaat aataggaatt
    17521 ttgttatttt ttatgaactg ttttaagcca ttctcttttt tatgagtacc aataactttt
    17581 ttagactttt tcctattctg tttcatcttt gtgtttttgt tccaatatcc ccgatggtga
    17641 tcgtcttcga cgagagctta tttatttaag aacctatcag agataggcat aagcggtctg
    17701 tttcgagaag ttttttgcaa agtttttctt taatccgaca gcttgtcacc cacacacaag
    17761 ccgtgtgggg ttacgcatag ctgagccact ttgtggctct aagttacagc tccaaaggag
    17821 ctgggattgt cgagcctagc acggctcgtg ctaggtggtt ttaaacccta attccactaa
    17881 ttcatcacaa agctgattac accaattcgg tattttgtct gaaattttta tcactttctt
    17941 atcagcaatc tgcaaaatca aattcggctt ggtttctgaa ttatcataaa tcagtgtttc
    18001 atcattgata aaaatcgctt caattaaatt ttcacggcta atgtgatagc gttttctaat
    18061 ggtttcttca tcaataaaat gtccgccggc tttcactctt gcttttaccc gtgcgatgtt
    18121 aattttatag ctatcgacac caatataatt taatcgagtt ttgaaatatc ctgctttggc
    18181 attttccatt cgttttagaa tagatttacc cgagagggtt gattccattg aaaatgcaac
    18241 ctgatttttt actgcaaact gaaatagttc gattgctttt ctgcccgcct caatatcggc
    18301 caatcttgga ttgagtgggt taatctgcat cgcaatatta tcggaatcaa tcacaatctc
    18361 gactttatct tgattgaaag aacgtaaagt agatttgccg gctccgtttg tgccacagta
    18421 aaaaattgct aggttattgt gcatattcaa tcactttttc cgtaccgtcc ggataatgct
    18481 gaattaaatc cccattttct cggcgatacg tcagcacttc gtgctttttc ttttcttcaa
    18541 accatgctgt aaagagaata tccagttcac gttgtttttt cagtaattct tcacgacttg
    18601 tcattttatg tcctctgttt cagaatcgcc aaataccttt ccaactcagc taattcatac
    18661 tgactaatca attcaaccaa actactaata tcttgttgat ttttatggaa atcatcaaaa
    18721 cattggtaat attgggctcg attggtaaat ttaatatcaa tcggtaaata gccctgtttt
    18781 aataattcaa aattaatcag taatcgccct gtgagcccgt ttccatcaat aaaagggtga
    18841 atgctttcaa aggctaaatg cagccaactg attgcctcta tgggatgaag tgcggtcagt
    18901 ttttgttgat atttttcaat caataattgc atttcttcgg caattaaata aggggggggg
    18961 cattttctgc ccctaaaatt cgtactggaa ttttgcgata aacccctcgg ctttccgcat
    19021 tgcccattaa taccagagaa tgaatatctt taatcgctcg ttcgcttaat ggttctttat
    19081 tggcgactaa ttcataaata tagttgaatg catccttaaa accgataata tctaaatgct
    19141 cccgaatcgg tttttcggca atggtcattc cctcttttaa aatgagcacc gtttcacgca
    19201 aagtaatggt attgccttca attgcattgg aattatagct gctttcaata ataaactctt
    19261 cccgcagtcg ttgaacttcg ctttcagata atggacggcg ttgtgaaagt gctgttttta
    19321 attgttcgat tttagctaat ttattcattc taacaccata tccaaatgcg caatcccatc
    19381 ttccaaatac acttctgaaa ccgctttaaa cccaaaactt tcataaaacc cttgcaggta
    19441 actttgggct tgggcgtgaa tgggttgagc aggaaaatgt tcgccacaat aatccatcgc
    19501 tttttgtacc aattcccttg ctaagcctga gccacgattt tctttcacca ccaacactct
    19561 acctatatgc acaccatcat tggctggaat taaacggcag taagcggtca gattttttgc
    19621 attttttgta aagaaatgca ccgcttgcag gtctttatta tcgacttctt ggtaagggca
    19681 gttttgctca accacaaaca ccgctgtacg tgcgtggtaa atctcaaaca actcttgggt
    19741 ggagagttca tcaaagcgtt ttgcgcgcca agagaggttt tttagcattg tatcgtttcc
    19801 agttgccaac caagttggcg gtattgttta tagcggtcac gagcctgtgc tttggcggtt
    19861 tcttccaccg gcacgaaatc aataatctgg gtaaaactgc cgataaattc ggggagttgg
    19921 gtttggagtg aaatcaacaa atcccgacgt tgagcattgc gtttaccttt ccacgaaatt
    19981 tcgataggcg ttgggtaagt ggtgatttct cccgataaat tgtgcggcac gaacgaatcc
    20041 ggatctcttg cccaaagtgc ttcgtcaata tttaacgctt gttgctcggt ttcgcatgca
    20101 atcagtaccc gtttacctaa tcgccacgct tgagccgcaa gttcgcaggc ttgcatttca
    20161 gcagcggaaa gctcggctgc atcggcttgg cttaatagat aaaattgtac ttgtttcaca
    20221 gaatgttccc agaaattcaa tcagatattt aaacttaata ttctagctga aaatgagtaa
    20281 aatataaaat ctaagcgttt gtttttgcaa aaaattgaga aaaaatgacc acttgtgttg
    20341 cgttgccttg aggaactaat tagcttttag acgttctaag agaacaatgc actatttcaa
    20401 tagttggaaa ttgtgtagaa tacccacttc atttagctat tttataagga acttactatg
    20461 ggcttatttg attttgttgg cgacattggt cgtaaattat ttaataaaga agaagatgct
    20521 tcaaaagcgg ttacagagca tttggcggaa gacaatccgg gcgttgaaaa tgtaaacgta
    20581 acggttgaaa acggggtagc gaaaatttca ggcattgctt caaccgcagc agctgttgag
    20641 aaagcggtat tgatggcggg taatgtggct ggtatcactg aggtaaatat tgatgaagtg
    20701 accttgcctg atgacgtgca acttgcaagt gatgatgagc tttatgttat ccaaaaaggg
    20761 gatacgttgt gggaaatcgc cacaaaagct tatggtaacg gtgcaaaata taaagcgatt
    20821 gtagaagcaa ataaagaagt tattaaagac gaaaataaaa tcttcccagg gcaaaaaatt
    20881 cgtatcccga aaggtttata atcaaattga aagagctaag ctggtcgaaa gtttagctct
    20941 ttttgtaggt ggtgttagac tgaaaatgga tattgaatgg cagggtggta ttcataacct
    21001 tcaactttga aatcatctaa gctcacccaa gtttctaaat cttctaagga ttttatatca
    21061 ggattaatga ttaatttagg tgcattgagt ggttctcgct taagttgaac atcacgcatt
    21121 aattctagtt gatcttcata aatatgcgca ttgacaattt tatggaacgc ttgtcctgcc
    21181 ttatgccctg taatttgagc cattaaagct aaaaaggtat agcattgaat catattccaa
    21241 tttaacccaa gcggtacatc tgccgaacgc tgagtactat tcaggtaaag cgtgccatca
    21301 agtagagaaa aatgatggct gtgtaaacaa ggacgtaagc agcccatatg gaaagcgccg
    21361 gggtggtaga aggtataaat ttcaccacgg ttatcaattc cttttttcaa atcgtccaca
    21421 atttgtcgca ataaatcgac tgagccaccg tctggtttcg ggaaattacg ccctactgcg
    21481 ccgtaaacca agcccatatc atcttcccct tttcgatagg gattagcaag ccattgtgca
    21541 ttttcatttg cattagcgtc ccacgatttt gtgcctaatt gacggaaatc agcagcatta
    21601 ctatagcctc gaatatagcc taaaagttcg gcaatcgcag ctttccaata actacggcga
    21661 gtggtaacta aaggaaattc tcctttttct acgtcataag ttaagtcagc attaatgact
    21721 gtgaggcagt gtttgcctgt acgttcattt gcaacccatt tgccttcgct aacgatgcgg
    21781 ttacataagt ctaaatactg tttcattatt taccttataa aaaattttag gtaattttgc
    21841 catttattcg gtaaaatagc taaaacttta tgacacaaca caataaggag ttatggatat
    21901 gaaaggtata atgaaatcca ttctggtttt ttccaccgct gtttttttag cagcttgttc
    21961 atcgaataaa agcggttgga cacgtttaaa tgataatgat gttgatcaga aatcttatgc
    22021 tattgcttat ggtgcaacgg ctcagactta tgcggataga gtaaatgaaa gctatgatat
    22081 caattccttt atgaatgggg taaatgattg gtacactaaa aaggttacat tgccaattga
    22141 gcaaattaga gcaataacga ttaatcgaat gttagaccat aatgtgtatg cttattatag
    22201 tggtgtgatt tatgccgcag atttgcaggc aaatttcaat catttagatc ctaattgttg
    22261 ggggcttgtt caaccagcga gtatgaccca gggcattcac gatgcgatgt tagatttaca
    22321 gaagaacaaa gttcgtggag atgagtatat caaaaatggg gttgagcaaa tattgcacct
    22381 ttgtgtaaaa acgattgctg aagatgaaaa tgaatcgcaa tctaaaggta aaaccaaaaa
    22441 gcataaataa gttaagctat gacaagcggt aaaattttta aaaaatttta ccgctttttt
    22501 ataaccgtat gaaatgttta atatttattc tatgaaactt aaaaaaacag cgttttgttt
    22561 attcaatagg caaacactcg ggatttttca attttcagga aaaagaattt gacatctttt
    22621 taaattctag taatatggcg cccacagaca cagtgagtgg tgagatggcc gagcaggctg
    22681 aaggcgctcc cctgctaagg gagtataggg ttaaaaagct ctatcgaggg ttcgaatccc
    22741 tctctcaccg ccatttactt tatcacgcac ccgtagctca gctggataga gtactcggct
    22801 acgaaccgag cggtcagagg ttcgaatcct ctcgggtgcg ccattttaat ttttactcta
    22861 ttcaaattaa aatggttgct gataaaatta aataaactta caattcaaat a
//
LOCUS       DANMCL010000040        22725 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.040, whole genome shotgun sequence.
ACCESSION   DANMCL010000040 DANMCL010000000
VERSION     DANMCL010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22725
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.040"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(225..300)
                     /locus_tag="PXF40_001347"
     tRNA            complement(225..300)
                     /locus_tag="PXF40_001347"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(265..267),aa:Asn,seq:gtt)
     gene            complement(306..381)
                     /locus_tag="PXF40_001348"
     tRNA            complement(306..381)
                     /locus_tag="PXF40_001348"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(346..348),aa:Phe,seq:gaa)
     gene            complement(513..1604)
                     /gene="mltC"
                     /locus_tag="PXF40_001349"
     CDS             complement(513..1604)
                     /gene="mltC"
                     /locus_tag="PXF40_001349"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HDL5802684.1"
                     /translation="MKKYAKYLPMLAIIPFLIACGSNKSTKKPKSTRVDYSKDTNGLD
                     ILAGQFSHNIDDIWGSNELLVASKKDYVKYTDKFYTRSHISFEEGVITIETLGNQNHL
                     RNSIIHTLLMGRDPKGIDLFASGDAPISSNPFLNGQVEDQFGRNITNVAIANDFATYL
                     LQNKVQTRRLKNGQTVSFVTIKMVAGHIEVRARQYLPLVRKMAKQYGIEPSLILGIME
                     VESAFNPYAISYANAIGLMQVVPRTAGRDIFARKGMGGQPSREYLYNPSNNIDAGTLY
                     LTILRDEYLDGIEDPVAKRYAMISAYNSGAGAVLRVFDSDRYSAIDRINDLSSDAVYR
                     ILTTAHPSSQARNYLRKVTTAREKYRNIR"
     gene            complement(1621..1890)
                     /locus_tag="PXF40_001350"
     CDS             complement(1621..1890)
                     /locus_tag="PXF40_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HDL5802685.1"
                     /translation="MARTVFCEYLKQEAEGLDFQLYPGELGKRIFDSISKQAWSEWIK
                     KQTMIVNEKKLSMMNPEHRKLLEQEMVNFLFEGKEIIIEGYKPVE"
     gene            complement(1894..3039)
                     /gene="mutY"
                     /locus_tag="PXF40_001351"
     CDS             complement(1894..3039)
                     /gene="mutY"
                     /locus_tag="PXF40_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HDL5802686.1"
                     /translation="MNSNSPFPLAKAKASDPFAKAVLAWFEQYGRKHLPWQQNKTLYQ
                     VWLSEVMLQQTQVATVIPYFARFMERFPTVIDLANASIDEVLHLWTGLGYYARARNLH
                     KAAIQIRDEFGGEFPTRFDDVLALTGVGRSTAGAILSSVLDAPHPILDGNVKRVLSRY
                     FAVEGWAGEKAVENRLWQLSESVTPDTQVADFNQAMMDLGAMICTRTKPKCLLCPLQE
                     NCKTNAMQAWDSFPAKKPKKTLPERQTYFLVLKSGSKVLLQKREAKGIWGGLFVFPQF
                     ESLEALKRSDFMQNLQISQQLTAFRHTFSHFHLDITPVLVETDLKKTSENSPLVVEEK
                     AGNYLSKVSSNADYWYDLHQHNEVGLATPVKRILDELAFSVKNEIKD"
     gene            3123..3515
                     /locus_tag="PXF40_001352"
     CDS             3123..3515
                     /locus_tag="PXF40_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HDL5802687.1"
                     /translation="MKSPILGFHHIALIVSDYEKSKHFYTRILGAEIIAETYREQRAS
                     YKLDLRFKDGSQIELFSFPETPPRFTSPETCGLRHLAFRVENIEYAIAFLEQHQLPHE
                     GIRIDEITGKRFTFFRDPDDLPLEFYEV"
     gene            3516..4385
                     /locus_tag="PXF40_001353"
     CDS             3516..4385
                     /locus_tag="PXF40_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5802688.1"
                     /translation="MLYLLIATLIWASSFIVGKVAISAFDPVQIMQIRLTLAAFIALP
                     FFIPAYKKIQKNQHIKVWLISFLTFPLYVILQFSGLKLTSAASAVALLGLNPLLTVLV
                     GYFCFKKQATRLDFILSLFACLGILIMASGSDDSGSINVLGLLLVTLGSLSFIVGMYL
                     SKEILQSVKVIDLTKIMLVQGAITALPITLLFAENWQLPTSLSAWASVAYLGIICTSL
                     AILLWNKGISQSSPILAGILLALEPVFGLLMALVFLSEQLSLVTWVGIIIVICTALLS
                     VLLPMMKRYKRLI"
     gene            4401..5114
                     /gene="sfsA"
                     /locus_tag="PXF40_001354"
     CDS             4401..5114
                     /gene="sfsA"
                     /locus_tag="PXF40_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HDL5802689.1"
                     /translation="MKFPPLSHGILLRRYKRFLADIQLPNGEQITLHCPNTGAMTGCA
                     NPGDTVWFSTSHNPKRKYAHTWELTQTQAGDFICVNTLRANQLVQEALENQWISELAD
                     YQHILPEQKYGSENSRIDFLLKSDLLPDCFVEVKSTTLLTENGVGMFPDAKTERGQKH
                     LRELTKIAEQGLQAVIFFAILHTGIERFEVAKQIDPKYAELFAQAIAQKVQVLSYKMA
                     ISLENGQPIAATLTKKCEF"
     gene            5175..5696
                     /gene="hslV"
                     /locus_tag="PXF40_001355"
     CDS             5175..5696
                     /gene="hslV"
                     /locus_tag="PXF40_001355"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HDL5802690.1"
                     /translation="MTTIVCVRKDGKVAIGGDGQATLGNCIEKGTVRKVRRLYKDKVV
                     TGFAGSTADAFILRDLFEKKLELHQGHLVKSAVELAKEWRTERALRRLEAMMIVANDS
                     EFLLVSGSGDVIEPEQDVLAIGSGGNYAKAAALALLRTENNLSAKEIVAEALKIAGDI
                     DIYSNYNHVIEEV"
     gene            5953..7278
                     /gene="hslU"
                     /locus_tag="PXF40_001356"
     CDS             5953..7278
                     /gene="hslU"
                     /locus_tag="PXF40_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HDL5802691.1"
                     /translation="MMSMTPREIVSELDAHIIGQKDAKRAVAIALRNRWRRMQLPEDL
                     RQEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LADVSMKLVRQQAVEKNKMRAQDAAEDRILDVLLPPAKDQWGNVQESDNNSTRQTFRK
                     KLREGQLDDKEIEIDVAAQVSVEIMTPPGMEEMTSQLQSLFEGMSPSKTKKRKMKIKD
                     ALKVMLDEEAAKLVNPEELKQQAIEAVEQHGIVFIDEIDKICKKGEHSGGDVSREGVQ
                     RDLLPIIEGSTVNTKHGMVKTDHILFICSGAFQVARPSDLLPELQGRLPIRVELKSLT
                     KEDFERILTEPNASLTLQYRELMKTEGVEIEFTKDGISRIAESAFRVNEKTENIGARR
                     LHTVLERLMDGISFDASERRGEKIIIDENYVSEALNDVVENEDLSRFIL"
     gene            7354..8232
                     /locus_tag="PXF40_001357"
     CDS             7354..8232
                     /locus_tag="PXF40_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HDL5802692.1"
                     /translation="MKNLYKWPAAQSLYPNQGKKSYAGKRFRYRLRSWLHHSKIKQFE
                     QFVTQNPQLIPLLNARPNYSYPVAHRFLDKRFSAKQRLQKITDNLLFLPQKLAHLPPL
                     WEQAVNFGEIIADFELWLNINEHQPMEGFWALELRHRPTNQLVYLLTFGKLDEALLIA
                     VIQGPNFEGSKELVKQLTKSCHGLRPAYLMVETMKALTAVLGYQSLLGIPQKYQNKSR
                     WVQSKRYVVDYDAIFAESGGKPGNYWQLPLELESKKIDEIPSKKRSMYRKRYEMLANL
                     KQTMELMLKTYTGLNG"
     gene            complement(8302..9018)
                     /locus_tag="PXF40_001358"
     CDS             complement(8302..9018)
                     /locus_tag="PXF40_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5802693.1"
                     /translation="MKKTLLTLLFGCVVTAQAQDIKFVMEPSYPPFEMTEEKGEIIGF
                     DVDIANAICKEMNANCTFHSQPFDSLIQSLKQKQFDAAISGMGITEPRKKQVLFSEPY
                     FPSSAAFIAKKDTDFAKVKTIGVQNGTTYQHYLAKEKKEYNVKSYASYQNAILDVQNG
                     RIDAIFGDVPVLAEMARKHEGLDFVGEKINNPNYFGDGLGIATHLKNQVLVDQFNAAL
                     KTIKENGEYQKIYDKWMGGK"
     gene            9425..9928
                     /locus_tag="PXF40_001359"
     CDS             9425..9928
                     /locus_tag="PXF40_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HDL5802694.1"
                     /translation="MNQSYFNLLGNITWLWMNSSLHKEWSCELLARNVIPAIENEQYM
                     LLIDNGIPIAYCSWADLNLETEVKYIKDINSLTPEEWQSGDRRWIIDWVAPFGHSQLL
                     YKKMCQKYPDMIVRSIRFYPKQKELGKIAYFKGGKLDKKTAKKRFDTYQEELATALKN
                     EFNFIKK"
     gene            9944..12805
                     /locus_tag="PXF40_001360"
     CDS             9944..12805
                     /locus_tag="PXF40_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX family hemolysin"
                     /protein_id="HDL5802695.1"
                     /translation="MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKI
                     ILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREERNNIATAQTSLGTIQTAIGLTE
                     RGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE
                     ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGD
                     KLKNIGGLDKAGLGLDVISGLLSGATAALVLADKNASTAKKVGAGFELANQVVGNITK
                     AVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADKFNHAKSLESYAERF
                     KKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSG
                     ITGVISTILQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMK
                     FLLNLNKELQAERVIAITQQQWDNNIGDLAGISRLGEKVLSGKAYVDAFEEGKHIKAD
                     KLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITKLNINRV
                     DSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGT
                     TEIDGGEGYDRVHYSRGNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALV
                     GNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHNDIFKGSKFNDAFNGGDGVDT
                     IDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIIT
                     DSDGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKAT
                     KDEKIEEIIGQNGERITSKQVDDLIAKGNGKITQDELSKVVDNYELLKHSKNVTNSLD
                     KLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA"
     gene            12880..15006
                     /locus_tag="PXF40_001361"
     CDS             12880..15006
                     /locus_tag="PXF40_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063101322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HDL5802696.1"
                     /translation="MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSL
                     TAWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNL
                     EQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLI
                     VSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFS
                     HSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLD
                     LLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDEKFARSADNQAFL
                     VESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVI
                     NLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLN
                     SPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSG
                     KSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIAL
                     SDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNN
                     PKILIFDEATSALDYESEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEI
                     VEQGKHHELLQNSNGLYSYLHQLQLN"
     gene            15018..16454
                     /locus_tag="PXF40_001362"
     CDS             15018..16454
                     /locus_tag="PXF40_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_140441352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HDL5802697.1"
                     /translation="MKIWLSGIYEFFLRYKNIWAEVWKIRKELDHPNRKKDESEFLPA
                     HLELIETPVSKKPRLIAYLIMLFLVVAIVLASVSKVEIVATAPGKLTFSGRSKEIKPI
                     ENAIVQEIFVKDGQFVEKGQLLVSLTALGSDADIKKTMASLSLAKLENYRYQTLLTAI
                     EKESLPVIDLSRTEFKDSSEEDRLRIKHLIEEQYTTWQKQKTQKTLAYKRKEAEKQTI
                     FAYVRKYEGATRIEQEKLKDFKALYKQKSLSKHELLAQENKLIEAQNELAVYRSKLNE
                     LENDLLNVKEELELITQFFKSDVLEKLKQHIENERQLRLELEKNNQRRQASMIRAPVS
                     GTVQQLKIHTIGGVVTTAETLMIIVPEDDVLEATALVPNKDIGFVAAGQEVIIKVETF
                     PYTRYGYLTGRIKHISPDAIEQPNVGLVFNATIAIDRKNLTSPDGRKIDLSSGMTITA
                     EIKTGERSVMSYLLSPLEESVTESLRER"
     gene            16695..17693
                     /locus_tag="PXF40_001363"
                     /pseudo
     CDS             16695..17693
                     /locus_tag="PXF40_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250818.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            17710..18453
                     /locus_tag="PXF40_001364"
     CDS             17710..18453
                     /locus_tag="PXF40_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5802698.1"
                     /translation="MKQKYIYGLAGLLLLLLGWQLGTALLSQRLPMASMLAPAKTWES
                     FTWLISSGEIFPHLWASLQRIAVGLLAALVIGVPLGLLLGFSKHLEMLCTPSFQLLRM
                     ISPLSWMPIIVMLLGVGDLPIYFLLAFATVWSLIISTTSGVKSIDPQWLQLGRVMSAT
                     RKELLCKIVVPAITGHVLTGLRVAVGIAWVVLVPCEMLGVNQGLGYFILDTRDRLAYS
                     ELMAVIIIIGLIGWALDSLIRLALAKGGR"
     gene            18608..19666
                     /locus_tag="PXF40_001365"
     CDS             18608..19666
                     /locus_tag="PXF40_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HDL5802699.1"
                     /translation="MSVLSSSFIQWLQQNAENLDQSNERADLLIPQIAALGLYKIGVP
                     ETLGGSGGTLVDAIKAVTELGNHSLAAAFVSWGHRTFIEHIIASKNPIPRQSYLADLL
                     NGNLTAGTGLSNAMKFLSGIEELNVNIREENGKRYLNGRLPWVTNLRSYRFVASFVAG
                     FQDERKPLVIAIPSTAKGLTRTKELEFIALQGTNTTSLVFENVELQDEWILADDAPEF
                     LAATRPAFLGLQFGLPFGLVERSLAEIEKSLPFRAILASEWQAQVDALNDIKTRLFNG
                     LNEEGYFVRNPKELFQARIDIVNVVAQTILLELQASGGRGYLKNDTSGFSRRWKEAAF
                     LPVVTPSAVQLRMVLANS"
     gene            complement(19787..20329)
                     /locus_tag="PXF40_001366"
     CDS             complement(19787..20329)
                     /locus_tag="PXF40_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HDL5802700.1"
                     /translation="MSQFQIHTIESAPETAQEALKAVQQANGFIPNLIGVLANAPTAL
                     ETYRTVGGINSRNSLTAEEREVVQITAAVVNGCGFCVAGHTKIALKALKMPEEVVNAL
                     RATARIDDNKLDTLARFTLAVMLQKAKLTEAQLNEFFAAGYNQQNAIDVILGVSLATL
                     CNYVNNIAEIPINPELQPFA"
     gene            complement(20481..21992)
                     /gene="glpK"
                     /locus_tag="PXF40_001367"
     CDS             complement(20481..21992)
                     /gene="glpK"
                     /locus_tag="PXF40_001367"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HDL5802701.1"
                     /translation="MEKQYIIALDQGTTSSRAVLLDKNANVVEVAQREFTQIYPQAGW
                     VEHNPMEIWSSQSSTLNEVVAKAGIKPDSIAAIGITNQRETTIVWEKETGKPVYNAIV
                     WQCRRTSDITDKLKADGHEEYIRKTTGLVVDPYFSGTKVKWILDNVEGAREKAERGEL
                     LFGTVDTWLVWKLTQGRVHVTDYTNASRTMLFNIHTKQWDDKMLELLNIPRSMLPEVK
                     NSSEVYGQTNIGGQGGVRIPVAGIAGDQQAALYGHLCVKEGQAKNTYGTGCFMLMHTG
                     NTAIQSENGLLTTIACNAKGEPEYALEGSVFIAGASIQWLRDELKIVHDSFDSEYFAT
                     KEDDSNGVYVVPAFTGLGAPYWDPYARGSIFGLTRGANRNHIVRATLESIAYQTRDVL
                     EAMQSDSKAKLQALRVDGGATANNFLMQFQADILDTKVERPKVKEVTALGAAYLAGIA
                     VGFWKDLEELKDKAEIERTFTPDGDQEKRAKRYKGWKKAVRRSLEWAKEDAEE"
     gene            complement(21996..>22725)
                     /locus_tag="PXF40_001368"
     CDS             complement(21996..>22725)
                     /locus_tag="PXF40_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HDL5802702.1"
                     /translation="LFFGAGCVAAAQVAGANFGLWEISIVWGLGVSMAIYISAGISGA
                     HLNPAVTIALAAFYGFEKHKILPYVIAQVAGAFCSVALIYFMYSDLFTAAEAAQGITR
                     GETVGFAGVFSTYPNPNITLVTAFIVEFVITVVLMSTILAIGDDKNGLPNKALAALLI
                     GLLIAVIGGATGPLTGFAMNPARDFGPKLFAYLAGWGEIALTGGKEIPYFIIPIVAPI
                     CGALFGAWGYKNLIHNNLPANTQE"
BASE COUNT         6850 a         4603 c         4743 g         6529 t
ORIGIN      
        1 accaccgaca cggggatttt caatcccctg ctctaccgac tgagctatcg aggcaacgtc
       61 gttgcgtggt gcattatgct gattttttcg ggcttcgtca aatacaattc tcaaaaattt
      121 agcgtttttg aacgcataat actaaaaatt gagcaatttc ttagtagtta gccggaaagc
      181 tcaaaaagaa aaccctgatg attactcatc agggcttcag aatatggctc ctcctgcggg
      241 actcgaacct gcgacatatg gattaacagt ccaccgttct accgactgaa ctaaggagga
      301 attgatggtg cctcgaggcg gaatcgaacc accgacacgg ggattttcaa tcccctgctc
      361 taccgactga gctatcgagg caacgtcgtt gcgtggtgca ttatgctgat ttcagcttgc
      421 aacgtcaaac gtttttttgc aaatttaaaa aaaccgctgc tcaaatgtgc tttttttata
      481 cttttcggct aaaaaacagc ataattcaca cattaacgaa tattgcgata tttctctctg
      541 gcggtggtta cttttcttaa ataatttcta gcttgagaag atggatgagc agtggttaaa
      601 attcgataaa ccgcatcaga cgaaagatcg ttaattctat caatcgcaga gtatcggtct
      661 gaatcaaaca ctcgtaatac cgcacctgct ccgctattgt atgcagaaat cattgcatag
      721 cgtttagcca caggatcttc aattccatct aagtattcat cacgcaaaat agtcaaataa
      781 agcgtacctg catcaatgtt atttgatgga ttataaagat attcacgact tggctgccct
      841 cccatacctt tacgggcaaa aatatcacgc ccggcggtac gaggtacaac ctgcattaag
      901 ccaatcgcat tggcatagct gatggcataa gggttgaatg ctgattcgac ttccataatc
      961 cctaaaatca aacttggctc aataccatac tgcttcgcca ttttacgcac cagcggtaaa
     1021 tattgtctgg cacgtacttc aatgtgtcct gccaccattt taatcgttac aaagctcaca
     1081 gtttgaccat ttttcaaacg gcgtgtttgc accttatttt gcaacaaata agtcgcaaaa
     1141 tcattggcga tggcaacatt ggtaatattt cgcccgaatt gatcttcaac ctgtccgttt
     1201 aggaaagggt tagagctaat cggtgcatcg cctgaggcaa ataaatcaat ccctttcggg
     1261 tctctgccca ttaataaagt atgaataatc gaattgcgta gatgattctg attccctaaa
     1321 gtctcaatcg taatcacccc ttcttcaaac gaaatatggc tacgggtgta aaacttatcc
     1381 gtatatttca cataatcttt cttactggca actaacagct cgttacttcc ccaaatatca
     1441 tcaatattgt gagaaaactg ccctgccaaa atatccaaac cattggtatc tttagaataa
     1501 tctactcggg tagattttgg cttcttagtc gatttattgc tcccacaagc aataagaaac
     1561 ggaataattg ccaacatcgg caaatattta gcatattttt tcattgtgat ttaaccttta
     1621 ttattcgacc ggcttatagc cttcgatgat gatctcttta ccttcaaata aaaaattgac
     1681 catctcttgt tcgagcagtt tacggtgttc ggggttcatc atactgagtt ttttctcatt
     1741 gacgatcatt gtctgttttt taatccactc agaccacgct tgcttgctga ttgagtcaaa
     1801 aatacgctta cccagctccc ccggataaag ttgaaaatct aaaccttctg cctcttgttt
     1861 taaatattcg caaaatacgg tacgagccat aatttaatcc ttaatctcat ttttcacact
     1921 gaatgccagc tcatctaaaa tacgtttaac cggcgttgct aaacccactt cgttatgttg
     1981 gtgcaaatca taccaataat ccgcatttga agatacctta gaaagataat ttcctgcttt
     2041 ttcttcgaca acaagcggtg aattttcact tgtttttttc aaatcggttt ctactaaaac
     2101 cggggtaata tccaaatgaa aatggctaaa agtatgccta aatgcagtta attgctgtga
     2161 aatttgcaaa ttttgcataa aatcagaccg cttgagagcc tctaagctct caaattgcgg
     2221 aaacacaaat aagccccccc aaatgccttt tgcttcccgt ttttgtaaca gcactttcga
     2281 gccgcttttc agcactaaaa aataggtttg acgctccggc aaggtttttt tcggtttctt
     2341 ggcaggaaag ctatcccacg cttgcattgc attcgtttta caattttctt gtagcgggca
     2401 gagcaagcac ttaggctttg tacgggtgca aatcatcgcc cctaaatcca tcatcgcttg
     2461 gttaaagtct gccacttggg tatcaggcgt cacactttcg cttaattgcc aaaggcgatt
     2521 ttccaccgct ttttcacccg cccagccttc tactgcaaaa tagcggctta acacccgttt
     2581 gacattgcca tctaaaatcg ggtgtggggc atctaacaca gaagacaaaa tcgcccctgc
     2641 agtacttctg cccactccgg ttaatgccaa cacatcatca aatcgggtag gaaattcacc
     2701 gccaaactca tctcgaattt gaattgccgc tttatgcaaa tttcttgccc gagcgtaata
     2761 acccagccct gtccacaaat gcaatacttc atcaatcgag gcattagcta agtcaattac
     2821 ggtgggaaat cgttccataa aacgtgcaaa ataaggaata acggtcgcta cttgagtttg
     2881 ttgcaacatt acctccgaca accaaacctg atacagcgtt ttattttgct gccaaggtaa
     2941 atgtttccgc ccatattgct caaaccaagc taaaacagct ttggcaaacg gatcagaagc
     3001 ttttgctttc gctaaaggaa atggggaatt gctgttcatt aaaaatcttg aaatccgaaa
     3061 aataaattat catactgcaa gcggtcagtt ttaccaaaaa ttttacacat taaggaaaaa
     3121 agatgaaatc gcccatttta ggtttccacc acattgcatt aattgtttcc gattacgaaa
     3181 aatccaaaca tttctacacc cgcattttag gggcagagat catcgcagaa acctaccgag
     3241 agcaacgtgc cagctataaa ttagatttac gctttaaaga tggctcacaa attgaattat
     3301 tcagttttcc tgaaacgccg cctcgtttca cctcgcccga aacctgcggg cttcgccatt
     3361 tggcatttcg agtggaaaat attgaatatg ccatcgcatt tttagaacaa catcaattac
     3421 cgcatgaagg gatccgaatt gatgagatca ccggcaaacg cttcacgttt ttccgagatc
     3481 cggacgatct gccgttagag ttttacgagg tctaaatgtt atatttactg attgcaaccc
     3541 tgatttgggc gagttcattc attgtaggta aagtggcgat ttcagccttt gaccctgtcc
     3601 aaattatgca aattcggctg acgttagcgg cgtttatcgc tctgccgttt tttattcctg
     3661 cgtataaaaa aatccagaaa aatcagcaca ttaaagtctg gctgattagt tttctcactt
     3721 ttcctctgta cgtgatctta caattttccg gcttgaaatt aacttccgca gcaagtgccg
     3781 tggcactact cgggctaaac ccgcttttaa ctgtgttagt cggctatttt tgtttcaaaa
     3841 aacaggcaac caggctcgat tttatcctaa gtttatttgc ctgcttgggg attttaatta
     3901 tggcatcggg tagcgatgat agcggttcaa tcaatgtatt aggattattg cttgtaacct
     3961 taggcagttt aagttttatt gtgggaatgt acctcagcaa agagattctg caatcagtaa
     4021 aagtgatcga tttaaccaag atcatgctgg tgcaaggggc aattaccgcc ttacctatta
     4081 ccttactctt tgcagaaaat tggcaactgc caaccagtct ctcagcatgg gcgagcgtag
     4141 catatttagg cattatttgt accagcttgg caatattgtt atggaacaaa ggcatcagcc
     4201 aatcttcgcc tattcttgca ggtattctac tcgcacttga accggtattc ggactgctaa
     4261 tggcattggt ctttttatca gaacagctca gtttagtgac ttgggttggg attattattg
     4321 ttatttgcac cgccttactc tccgttttgc taccgatgat gaaaagatac aagcggttaa
     4381 tttaacagga ttttttgcaa atgaaatttc cccctctttc ccacggcatt ttacttcgcc
     4441 gttataaacg ttttcttgcc gatattcagt tgccaaatgg cgaacaaatt accctccatt
     4501 gcccaaatac cggtgcgatg acaggctgtg ccaaccccgg tgatacagtt tggttttcca
     4561 cctctcataa ccccaaacgt aaatatgctc acacttggga actaacccaa acccaagcgg
     4621 gggattttat ttgtgtcaat accttgagag ccaatcagct tgtacaagaa gccttggaaa
     4681 atcaatggat tagcgagctt gcggattatc agcacattct gcctgaacaa aaatatggca
     4741 gtgaaaacag tcggattgat tttttgctca aatcggacct tctgccggat tgttttgtgg
     4801 aagtgaaatc taccaccctt ttaaccgaaa acggtgtggg aatgttcccc gatgccaaaa
     4861 ccgagcgggg gcaaaaacat ttgcgggagc tgacgaaaat cgctgaacag ggcttacaag
     4921 cggtcatttt tttcgctatt ttgcacacag gtattgaacg gtttgaagtg gcaaagcaga
     4981 tagaccccaa atatgccgaa ttattcgctc aagccattgc acaaaaagtg caggttctct
     5041 cctataaaat ggcaatttca ttggaaaacg ggcaacctat tgcggcaacc ttaacaaaga
     5101 aatgtgagtt ttaagcttga aaacacacag catatcccca tataagccaa agtttttaaa
     5161 aagaaggatt tagtatgaca acgattgtat gcgtgcgtaa agacggaaaa gtggctatcg
     5221 gtggtgatgg tcaggcaacg cttggaaatt gtatcgagaa aggcacggtg cggaaagttc
     5281 gccgtttgta taaagacaaa gtggtgacag gctttgccgg ctcgaccgct gatgccttta
     5341 ttttgcgtga tttattcgag aaaaaattgg agttacacca agggcattta gtgaaatcgg
     5401 cagtggaact ggcaaaagag tggcgtaccg agcgtgcttt acgccgttta gaagcgatga
     5461 tgattgtcgc caatgacagc gagtttttat tggtttcagg ttcgggcgat gtgattgagc
     5521 cggagcaaga tgtgctggcg attggttcag gcggtaacta tgcgaaagcc gctgctcttg
     5581 cgttattacg caccgaaaat aatttatctg caaaagaaat cgttgcggaa gcgttaaaaa
     5641 tcgccggcga tattgatatt tacagtaact acaatcacgt gattgaagaa gtttagttaa
     5701 ataactctct ccccttgtgg gacaaatgtt tacatttgaa cgttggcttt gccaacggct
     5761 ccacaggagc gagcgtagcg agtattgaga ccgaaaaata tttcgttcag aaatattttt
     5821 cagagagagg ggttaatgca aaacgtttaa gaaaaaagac cgcttgttac cctctccctg
     5881 atttttcttc tgaacaaaga aaaatctgtc cctctcccac aaggggagag ggtaattaat
     5941 ttaaggaata acattatgtc aatgacaccc cgtgaaatcg tctcagaatt agacgcacac
     6001 attatcggac aaaaagatgc aaaacgtgcg gtagcaattg ctttgcgtaa ccgctggaga
     6061 agaatgcagt tgccggaaga tctccgccaa gaagtgaccc ccaaaaatat tttaatgatc
     6121 ggtccgaccg gtgtgggtaa aaccgaaatc gcccgccgtt tggcgaagct tgccaatgcc
     6181 ccttttatca aagttgaggc aaccaaattc actgaagtgg ggtatgtggg taaagaagtg
     6241 gattcgatta tccgtgatct agctgatgtg tcgatgaaat tagtccgcca acaagcggtc
     6301 gaaaaaaata aaatgcgtgc acaagatgca gcggaagatc gcattttaga cgtattattg
     6361 ccaccggcga aagatcagtg gggaaatgtg caggaatccg acaataattc tacccgccaa
     6421 actttccgca aaaaattgcg tgaagggcaa ttagacgata aagagattga aattgacgtg
     6481 gcagctcaag tgagcgttga gattatgacc ccgccgggaa tggaagagat gacctcgcaa
     6541 ttacaatcgc tgtttgaggg aatgtcgcca agcaaaacca aaaaacgcaa aatgaaaatc
     6601 aaagatgcgt taaaggtgat gcttgatgaa gaagcggcga aattagtaaa tcctgaagag
     6661 ctgaaacagc aagcgattga agcggtggaa cagcacggta ttgtctttat tgatgagatc
     6721 gacaaaatct gtaaaaaagg cgagcattcg ggtggagatg tttctcgtga aggtgttcag
     6781 cgtgatttac ttccaatcat tgaaggctca acggtaaata ccaagcatgg tatggtgaaa
     6841 accgaccata ttctgtttat ctgctcgggg gcattccaag tggctcgccc gtctgattta
     6901 ctcccagaat tacagggtcg cttgccgatt cgtgtggagt taaaatcgct taccaaagaa
     6961 gattttgagc gtattttaac cgaaccgaat gcctcattaa ccttgcaata tcgtgagttg
     7021 atgaaaactg aaggcgtgga gattgagttc actaaagacg gtatcagccg tattgcagaa
     7081 agtgcattcc gtgtgaacga gaaaaccgaa aacatcgggg caagacgttt acacaccgtg
     7141 cttgagcgtt tgatggacgg catttcgttc gatgccagcg aacgccgtgg tgaaaaaatc
     7201 atcattgatg aaaactatgt ttccgaagcg ttaaatgacg tggtggaaaa cgaagattta
     7261 agtcgcttta ttttgtagtt ttaagttata caagcggtta ttttagcgaa aaatcttgcg
     7321 aattagccgc ttttcatatt gttagttgta aaaatgaaaa atctatacaa atggcctgct
     7381 gcacaatcgc tttatccaaa tcagggaaag aagtcttacg cagggaaacg ttttcgttac
     7441 cgtcttcgct cttggttgca tcattccaaa atcaagcaat ttgagcagtt cgttacacaa
     7501 aatccacaac tgattccgct cttaaatgct cgaccaaatt acagctaccc cgtggctcac
     7561 cgctttttag ataagcgttt cagtgcaaaa caacgcttac aaaaaatcac agataacctg
     7621 ctgtttttac cgcaaaaatt ggctcattta ccacctctat gggaacaagc ggtcaatttt
     7681 ggtgaaatta ttgcagattt tgagttatgg cttaacatca atgaacatca gccgatggaa
     7741 ggtttttggg cattagaact tcgccacaga ccgactaatc agctagttta tttattaaca
     7801 tttggtaagt tagatgaagc cttgttgata gccgtaattc aaggtccgaa ttttgaaggt
     7861 tcaaaagagc tggtgaaaca attaaccaaa agttgccacg gcttacgccc ggcctattta
     7921 atggttgaaa cgatgaaggc tttaacggct gttcttggct atcagagttt actaggcatt
     7981 ccacagaaat accagaataa atcccgctgg gtgcaaagta agcgctatgt agtggattat
     8041 gatgctattt ttgcggaatc gggcggaaag ccgggaaatt attggcagtt accccttgaa
     8101 ttggaaagta aaaaaataga tgaaattcca agcaaaaaac gctcaatgta tcgcaagcgt
     8161 tatgaaatgc tagctaattt aaagcagacc atggagctta tgcttaaaac ttatactggc
     8221 ttaaatgggt aaatcaaaga atacaagcgg tcaaaatctg caaaactttg caaaactttg
     8281 caaaaaatga ccgcttacaa gttacttgcc gcccatccat ttatcataga ttttttgata
     8341 ttcgccattc tctttaatcg tttttaatgc tgcattgaat tgatcaacta atacttggtt
     8401 tttcaagtga gttgcaatgc ctaaaccatc accaaaatag tttggattat tgattttctc
     8461 ccctacaaaa tctagccctt cgtgttttct tgccatctca gccaataccg gcacatcgcc
     8521 aaaaatagca tcaattcgcc cattttgcac atctaaaata gcattttgat aagaggcata
     8581 agatttcaca ttgtactctt ttttctcttt tgctaaatag tgttggtaag tagtcccatt
     8641 ttgcacacca atcgttttca ccttagcaaa atctgtatct tttttcgcaa tgaaggcagc
     8701 agagcttgga aagtaaggct cgctaaataa tacttgtttc ttacgtggtt ccgtaatacc
     8761 catacctgaa attgcagcat caaattgttt ttgttttagg ctttggatta agctatcaaa
     8821 aggttggcta tggaatgtac aatttgcatt catctcttta cagatagcat ttgcaatatc
     8881 cacatcaaaa ccgataattt ctcccttctc ttcggtcatt tcaaatggag gatagcttgg
     8941 ctccatcaca aatttgatat cttgtgcctg cgcagtaacc acacacccga ataaaagggt
     9001 caaaagtgtt tttttcataa aaagtccctg tgttttcatt ataaggatta ccactttaac
     9061 gcagttactt tcttaaaaaa agtcttcttt tcataaagtt tgttttatgt catacaaaca
     9121 catcaaattg agatgtagtt tctcaatcct cttgattcct ctatctcaaa aaaacaaccc
     9181 aaaagaaaaa agaaaagtat atgttacatt aatattacaa tgtaattatt ttgtttaatt
     9241 tccctacatt ttgtataact ttaaaacact cctttttctc ttctgattat ataaaagaca
     9301 aaaaatacaa tttaagctac aaaaaacaac aaaaaacaac aaaaaacacg acaataagat
     9361 cgagtaatga ttatattatg ttataatttt tgacctaatt tagaataatt atcgagtgca
     9421 aattatgaat caatcttatt ttaacttact aggaaacatt acttggctat ggatgaactc
     9481 ctccctccac aaagaatgga gctgtgaact actagcacgc aatgtgattc ctgcaattga
     9541 aaatgaacaa tatatgctac ttatagataa cggtattccg atcgcttatt gtagttgggc
     9601 agatttaaac cttgagactg aggtgaaata tattaaggat attaattcgt taacaccaga
     9661 agaatggcag tctggtgaca gacgctggat tattgattgg gtagcaccat tcggacattc
     9721 tcaattactt tataaaaaaa tgtgtcagaa ataccctgat atgatcgtca gatctatacg
     9781 cttttatcca aagcagaaag aattaggcaa aattgcctac tttaaaggag gtaaattaga
     9841 taaaaaaaca gcaaaaaaac gttttgatac atatcaagaa gagctggcaa cagcacttaa
     9901 aaatgaattt aattttatta aaaaatagaa ggagacatcc cttatgggaa ctagacttac
     9961 aaccctatca aatgggctaa aaaacacttt aacggcaacc aaaagtggct tacataaagc
    10021 cggtcaatca ttaacccaag ccggcagttc tttaaaaact ggggcaaaaa aaattatcct
    10081 ctatattccc caaaattacc aatatgatac tgaacaaggt aatggtttac aggatttagt
    10141 caaagcggcc gaagagttgg ggattgaggt acaaagagaa gaacgcaata atattgcaac
    10201 agctcaaacc agtttaggca cgattcaaac cgctattggc ttaactgagc gtggcattgt
    10261 gttatccgct ccacaaattg ataaattgct acagaaaact aaagcaggcc aagcattagg
    10321 ttctgccgaa agcattgtac aaaatgcaaa taaagccaaa actgtattat ctggcattca
    10381 atctatttta ggctcagtat tggctggaat ggatttagat gaggccttac agaataacag
    10441 caaccaacat gctcttgcta aagctggctt ggagctaaca aattcattaa ttgaaaatat
    10501 tgctaattca gtaaaaacac ttgacgaatt tggtgagcaa attagtcaat ttggttcaaa
    10561 actacaaaat atcaaaggct tagggacttt aggagacaaa ctcaaaaata tcggtggact
    10621 tgataaagct ggccttggtt tagatgttat ctcagggcta ttatcgggcg caacagctgc
    10681 acttgtactt gcagataaaa atgcttcaac agctaaaaaa gtgggtgcgg gttttgaatt
    10741 ggcaaaccaa gttgttggta atattaccaa agccgtttct tcttacattt tagcccaacg
    10801 tgttgcagca ggtttatctt caactgggcc tgtggctgct ttaattgctt ctactgtttc
    10861 tcttgcgatt agcccattag catttgccgg tattgccgat aaatttaatc atgcaaaaag
    10921 tttagagagt tatgccgaac gctttaaaaa attaggctat gacggagata atttattagc
    10981 agaatatcag cggggaacag ggactattga tgcatcggtt actgcaatta ataccgcatt
    11041 ggccgctatt gctggtggtg tgtctgctgc tgcagccggc tcggttattg cttcaccgat
    11101 tgccttatta gtatctggga ttaccggtgt aatttctacg attctgcaat attctaaaca
    11161 agcaatgttt gagcacgttg caaataaaat tcataacaaa attgtagaat gggaaaaaaa
    11221 taatcacggt aagaactact ttgaaaatgg ttacgatgcc cgttatcttg cgaatttaca
    11281 agataatatg aaattcttac tgaacttaaa caaagagtta caggcagaac gtgtcatcgc
    11341 tattactcag cagcaatggg ataacaacat tggtgattta gctggtatta gccgtttagg
    11401 tgaaaaagtc cttagtggta aagcctatgt ggatgcgttt gaagaaggca aacacattaa
    11461 agccgataaa ttagtacagt tggattcggc aaacggtatt attgatgtga gtaattcggg
    11521 taaagcgaaa actcagcata tcttattcag aacgccatta ttgacgccgg gaacagagca
    11581 tcgtgaacgc gtacaaacag gtaaatatga atatattacc aagctcaata ttaaccgtgt
    11641 agatagctgg aaaattacag atggtgcagc aagttctacc tttgatttaa ctaacgttgt
    11701 tcagcgtatt ggtattgaat tagacaatgc tggaaatgta actaaaacca aagaaacaaa
    11761 aattattgcc aaacttggtg aaggtgatga caacgtattt gttggttctg gtacgacgga
    11821 aattgatggc ggtgaaggtt acgaccgagt tcactatagc cgtggaaact atggtgcttt
    11881 aactattgat gcaaccaaag agaccgagca aggtagttat accgtaaatc gtttcgtaga
    11941 aaccggtaaa gcactacacg aagtgacttc aacccatacc gcattagtgg gcaaccgtga
    12001 agaaaaaata gaatatcgtc atagcaataa ccagcaccat gccggttatt acaccaaaga
    12061 taccttgaaa gctgttgaag aaattatcgg tacatcacat aacgatatct ttaaaggtag
    12121 taagttcaat gatgccttta acggtggtga tggtgtcgat actattgacg gtaacgacgg
    12181 caatgaccgc ttatttggtg gtaaaggcga tgatattctc gatggtggaa atggtgatga
    12241 ttttatcgat ggcggtaaag gcaacgacct attacacggt ggcaagggcg atgatatttt
    12301 cgttcaccgt aaaggcgatg gtaatgatat tattaccgat tctgacggca atgataaatt
    12361 atcattctct gattcgaact taaaagattt aacatttgaa aaagttaaac ataatcttgt
    12421 catcacgaat agcaaaaaag agaaagtgac cattcaaaac tggttccgag aggctgattt
    12481 tgctaaagaa gtgcctaatt ataaagcaac taaagatgag aaaatcgaag aaatcatcgg
    12541 tcaaaatggc gagcggatca cctcaaagca agttgatgat cttatcgcaa aaggtaacgg
    12601 caaaattacc caagatgagc tatcaaaagt tgttgataac tatgaattgc tcaaacatag
    12661 caaaaatgtg acaaacagct tagataagtt aatctcatct gtaagtgcat ttacctcgtc
    12721 taatgattcg agaaatgtat tagtggctcc aacttcaatg ttggatcaaa gtttatcttc
    12781 tcttcaattt gctagagcag cttaattttt aatgattggc aactctatat tgtttcacac
    12841 attatagagt tgccgtttta ttttataaaa ggagacaata tggaagctaa ccatcaaagg
    12901 aatgatcttg gtttagttgc cctcactatg ttggcacaat accataatat ttcgcttaat
    12961 ccggaagaaa taaaacataa atttgatctt gacggaaaag ggctttcttt aactgcttgg
    13021 cttttagctg caaaatcgtt agcgttgaaa gcgaaacaca ttaaaaaaga gatttcccgc
    13081 ttacacttgg tgaatttacc ggcattagtt tggcaagata acggtaaaca ttttttattg
    13141 gtaaaagtgg ataccgataa taaccgctat ttaacttaca atttggaaca agatgctcca
    13201 caaattctgt cacaagacga atttgaagcc tgctatcaag ggcagttaat tttggtcacg
    13261 tccagagctt ccgtagtagg tcaattagca aagttcgatt tcacctggtt tattccggcg
    13321 gtgatcaaat accgaaaaat ctttctagaa accttgattg tttcgatctt tttgcaaatt
    13381 tttgccctaa ttacaccgct attcttccaa gttgttatgg ataaagtact ggtgcatcga
    13441 ggtttttcaa ccttgaatat cattacggtt gccttagcta ttgtgatcat ctttgaaatt
    13501 gtactaagtg gtttgagaac ctatgttttt tctcatagca ctagccgtat tgatgttgaa
    13561 ttaggcgcta aattatttcg acatttatta tcactaccca tttcttattt tgaaaacaga
    13621 cgagttggag atacagtcgc tagggttaga gaattagatc aaattcgtaa tttccttacc
    13681 ggacaagcat taacctcggt gttagatctc ttattctctt ttatcttttt tgccgtaatg
    13741 tggtattaca gcccaaaatt aaccttggta attcttggtt cattgccctg ctatatttta
    13801 tggtcaattt ttattagtcc gattttaaga cggcgtttag atgagaaatt tgcccgaagt
    13861 gctgataacc aagcattctt agttgagtcg gtaacagcca tcaatatgat taaagcgatg
    13921 gcggttgctc cacaaatgac ggatacatgg gataaacagc tggcaagcta tgtttcatca
    13981 agtttccgtg tcaccgtatt agcaaccatt gggcaacaag gtgtacaact tattcaaaaa
    14041 accgttatgg tgattaacct ttggttaggg gcacacttag ttatttcagg cgatctgagt
    14101 attgggcaat taattgcctt taatatgcta tcagggcaag tgattgcacc ggtgattcgg
    14161 ctggctcagc tctggcaaga tttccaacaa gttgggattt ccgtcactcg cttaggtgat
    14221 gttttaaact ctccaaccga acaatatcaa ggcaaattat cactaccaga aataaaaggc
    14281 gatatctcat ttaaaaatat ccgctttaga tataaaccag atgcaccaac tattttaaat
    14341 aatgtgaatt tagaaattag gcaaggagaa gtgattggga ttgttggacg ttccggttca
    14401 ggcaaaagta ctctgactaa attactgcaa cgtttttata ttcctgaaaa tgggcaggtt
    14461 ttgattgatg gacatgatct agccttagct gatccaaact ggctacgccg tcaaataggt
    14521 gtagtgctgc aagataatgt gttattaaac cgcagtatcc gagaaaatat tgcgctatca
    14581 gatccaggaa tgccaatgga gcgagtaatt tatgcagcaa aattagcagg ggctcacgat
    14641 tttatttcag aattgcgtga aggttataac accattgtgg gtgaacaagg agcggggctt
    14701 tcaggcgggc aacgccaacg gattgcgatt gctcgagctt tggtaaacaa cccgaaaatc
    14761 ctgatttttg atgaggcaac cagtgccctc gattacgaat ctgagcatat tattatgcaa
    14821 aatatgcaaa aaatatgcca aggcagaacc gtgattttga ttgcacatcg tttatcgacc
    14881 gtcaaaaatg cggatcgaat tattgtgatg gaaaaggggg aaattgttga gcaaggcaag
    14941 caccacgaat tactgcaaaa cagtaacgga ctttattcct acttacacca attacaactt
    15001 aattaagaag gaaaacaatg aaaatatggc ttagtggtat ttatgaattt ttcctacgct
    15061 ataaaaacat ttgggcagaa gtatggaaaa ttcgtaaaga attagaccac ccaaacagaa
    15121 aaaaagacga aagtgaattt ttaccggcac atttagaact gattgaaacc ccggtttcta
    15181 aaaaaccacg tctaattgct tatttgatta tgctattttt agttgtggca attgtgcttg
    15241 ccagtgtaag caaagttgaa attgtggcga ctgctcccgg taaattaact tttagtggca
    15301 gaagtaaaga aattaaaccg attgaaaacg ccattgtaca agaaattttc gttaaagatg
    15361 ggcagtttgt ggaaaaaggg caattattag tcagcttaac tgcattgggt tctgatgcag
    15421 atatcaaaaa gaccatggct tcactttctt tagctaaact ggagaactat cgctaccaaa
    15481 ctttgcttac tgccattgaa aaagagtcct tgccggtgat tgatttatct agaaccgaat
    15541 ttaaagattc atcggaagaa gatcgactac gtattaaaca cttaattgag gagcaataca
    15601 ccacttggca aaaacaaaaa acacagaaaa ctttagcgta taagcgtaaa gaggctgaaa
    15661 aacaaacaat atttgcctat gtccgtaaat atgaaggtgc aacacgtatt gaacaagaaa
    15721 aattaaaaga ctttaaggca ctttataaac agaagtcttt atctaagcac gaacttcttg
    15781 cgcaagaaaa taaattaatt gaggctcaga atgagctagc tgtttatcgc tcaaaattaa
    15841 atgaattaga aaatgatcta ctcaatgtaa aagaagaact tgaattgatc acgcaattct
    15901 ttaaaagcga tgtgttggaa aaattaaagc aacatattga aaatgaacgc caacttcggc
    15961 tcgagttaga aaaaaataat caacgcagac aggcctcgat gatcagagca ccggtttccg
    16021 gtacggttca gcaactgaaa attcacacta taggtggtgt tgttacgact gctgaaacct
    16081 tgatgatcat tgtgccggaa gacgatgtgt tagaggccac cgctctggtt ccaaacaaag
    16141 atatcggctt tgttgcagca gggcaggagg tgattattaa agtggaaact ttcccttata
    16201 cacgctatgg ttatctaact ggtcgaatta aacatattag cccggatgcg attgaacaac
    16261 ctaatgtagg cttagttttt aatgcaacta tagctataga taggaagaat ctaacatcgc
    16321 ctgatgggcg aaaaattgat ttgagttcag gtatgacaat aactgctgaa atcaaaaccg
    16381 gtgaacggag tgtaatgagt tatttactca gcccattaga agaatctgtc acagaaagtt
    16441 taagggaacg ctaatcgaac caaaacaaag ccataaaagc cattttgagc ttttatggct
    16501 ttatttttta gtccacaagc ggtcaaaaaa gcccaatttt ttacactttt ataacaaatt
    16561 gttctaacta aaaattacta attcttttct tttataagac gaatcctcta ttttcatttc
    16621 attaacattg aactagaaaa ggggatttat gagcctaagc attacgaatc tttctcttgg
    16681 ctaccgcaaa aatcagcaaa ggcttatttg aaaagcacgg tgtgcaggtg gaaaaaccgg
    16741 tgatgtttcg cagctgggct cagttggtgg aagccttttt aagtggcaat gtgaacgtgg
    16801 tgcatctgct ttcgcctatg agtttgtggg cgaaatatgg agcaaatgct ccggtgaaag
    16861 cggtaatgtg gaatcacttg gcaggttcgg ctttaacggt tcgccctgaa atcaacagta
    16921 ttgccgaact ctccggcaaa acggtagcaa ttccgttttg gtattcaatt cataatatcg
    16981 ttttgcaacg attattacga gaaaatggct tgaaaatcac cgaaaaagag ccgaaaagcg
    17041 gtgaagtgcg attaagtgta atggctccgt cagatatggt ggcagcgttg gcaagtgagg
    17101 caatttccgg ctttattgtg gcagagccgt tcaatgcgtt agcggaagcc aaaggtgtgg
    17161 ggaaggtgct gcgttttagt ggcgatgtgt ggaaagatca cgcctgctgt ttaaccctaa
    17221 tgcacgaata cgatattcaa caccgcccgg aatgggtgca aaaagtggtg aatgtcttaa
    17281 ccgaagccca agtgtccacg cttgccaacc gtgcagaaac cgctcaatta ttggctcggg
    17341 gcagcggcta cacgccgcac gatcaaaaag tgctggaaaa ggtactggct ccaacccaag
    17401 ctcagtggga taaatatatc gaaacagggg caattcaaaa ccctcagtgg caccaacagc
    17461 gaatcggttt ccaaccgtat ccgttcgatt cctatatgga agagctggtc aaaatgctca
    17521 aacagaccca cattgccggc aataatgcgt ttttacaaca gcttgacccg gtagaggcag
    17581 cgaaagcgat taacgagccg acctttgtgc gaaaagcgat tgagcaaggc ggttgggttg
    17641 aaacctttaa tttacaaacc ggttggacaa gaaccgagca aattagtgta taagcgatag
    17701 gaacgaacga tgaaacagaa atatatttac ggcttagccg gtttattact gctactttta
    17761 ggttggcagc ttggcacagc cttgttaagc caacggttgc cgatggcgtc aatgttagct
    17821 ccggcaaaaa cctgggaaag ttttacttgg ctgatttcct ccggcgaaat ttttccgcac
    17881 ttatgggcga gtttgcaacg cattgctgtc gggctactcg ctgcgttagt gattggtgta
    17941 ccgctgggct tattgctcgg cttctccaag caccttgaaa tgctttgcac gccgtcattc
    18001 caactactac gtatgatttc gccactttcg tggatgccga ttatcgtgat gttacttggt
    18061 gtaggcgatt tgccgattta ttttttactg gcgtttgcca ccgtttggtc gttgattatt
    18121 tccaccacct caggggtaaa aagcattgat ccacaatggt tacaactggg tagagtaatg
    18181 tcggctaccc gcaaagaact gctgtgcaaa attgttgtac cggctattac cggacacgtt
    18241 ctcaccggtt tacgtgtggc ggttgggatt gcgtgggtgg tgctggtacc gtgcgaaatg
    18301 ctaggcgtga atcaaggact cggctatttt attttagaca cccgagaccg attagcctat
    18361 tccgaactga tggcggtaat tataattatc ggcttaatcg gctgggcgtt ggatagctta
    18421 atccgcttgg ctttagcgaa aggcggcaga taaattgaca agcggtcgaa aaattgcatt
    18481 tttttgcaaa aaatcgaccg cttgtttatt cccaaaaagc atattacctt aatttatttt
    18541 atttctaggg cataaaaaag cgatttaaga tagcgacaaa gtaaactaat tatacgaggt
    18601 aaacacaatg tcggttcttt catcttcttt tattcaatgg cttcagcaga acgccgaaaa
    18661 tttagatcaa tctaacgaac gagcggattt actcattcca caaattgccg cactagggct
    18721 atataaaatc ggcgtgccgg aaacgcttgg cggcagcggt ggcactttgg ttgatgcgat
    18781 caaagccgtt accgaactgg gtaatcactc gctggctgcg gcatttgttt cgtggggaca
    18841 tcgtaccttt atcgagcata ttatcgcctc aaaaaatcct attccccgcc aaagctattt
    18901 ggcggatctg ctaaatggca atttaaccgc aggaacaggt ttatccaatg cgatgaaatt
    18961 tctctccggc attgaagagt tgaatgtgaa tattcgtgaa gaaaacggta aacgctattt
    19021 aaatggccgc ctgccttggg taaccaattt acgttcatac cgctttgttg ctagtttcgt
    19081 tgccggtttt caagacgaac gcaaaccgct agtgattgca attccctcca ccgccaaagg
    19141 cttaacccgc accaaagaat tggaatttat cgcattgcaa ggcacgaata ctacctctct
    19201 cgtatttgag aatgtggaat tacaagatga atggattttg gctgatgacg cgcctgagtt
    19261 tttagcagcc actcgccctg cgttcttagg tttacaattt ggtttgccct ttggcttggt
    19321 tgaacgtagt ttggcggaaa tcgaaaaatc gctccctttc cgtgcaattc tcgcctctga
    19381 gtggcaagct caagttgatg ccctcaacga tattaaaact cgtctgttta atggcttaaa
    19441 tgaagaaggt tattttgtgc gtaatccgaa agagcttttc caagcgagaa ttgacattgt
    19501 caatgtcgtc gcccaaacta ttctgctaga actgcaagcg agtggcggac gtggctatct
    19561 gaaaaatgat acttcaggct tcagccgccg ttggaaagaa gcggcatttc tgcccgttgt
    19621 tacgccaagt gcggtacagc tgagaatggt gctggcgaat agttaagcgg ataagagaca
    19681 aattgttgcc tcttttattt tgcaaaaaat agtctaaata taaccgcttg caataaaaat
    19741 aaaaaaggat gcatttttta tgcttcctca attttacggc tatctattat gcaaaaggct
    19801 gcaattcagg gttaattgga atttcggcaa tgttgttaac gtagttacat aatgttgcca
    19861 agctcacgcc taaaatcaca tcaatcgcat tttgttggtt gtaacctgcg gcaaaaaatt
    19921 cgtttaattg ggcttcggtt aatttggctt tttgtaacat tactgcaagg gtgaagcgag
    19981 ccagagtgtc taatttgtta tcgtctatgc gagccgtggc acgtaaagca tttaccactt
    20041 cttcaggcat ttttaatgct tttaaggcga ttttagtatg acctgccacg cagaaaccac
    20101 agccgttgac cactgctgcg gtgatttgta ccacttcacg ttcttcagcg gttaagctgt
    20161 tacgactatt aataccaccc acagtgcggt aagtttccag tgctgttggt gcgttggcta
    20221 atacgccgat cagatttggg ataaaaccgt ttgcttgttg cactgctttt agggcttctt
    20281 gtgccgtttc aggagcggat tcaatagtgt gaatttgaaa ttgagacata aatgttcctt
    20341 atcaggttgt ttattggtgt ggctcatcat aaagaaaagg ctaatttaga acaaatcaaa
    20401 atcactattt aatataacta aaagatctta aagggagtat agttgcctat actccctttg
    20461 tttatgcaca ggttgcgttt ttactcttct gcgtcttctt ttgcccattc taatgagcgg
    20521 cgaacggctt ttttccaacc tttatagcgt ttcgcccgtt tttcttggtc gccgtccggt
    20581 gtgaaggtgc gttcaatttc cgctttgtct ttcagttctt ccaaatcttt ccagaagccg
    20641 acagcaatac ccgcaagata agctgcccct aaagcagtga cttctttcac tttcggacgc
    20701 tcaactttgg tgtctaaaat atcggcttgg aactgcatta agaagttgtt tgcggttgca
    20761 ccaccgtcca cacgtaacgc ttgtagtttc gctttggagt cagactgcat tgcttctaac
    20821 acatctcggg tttggtaagc gatagactct agggtcgcac gcacaatgtg gttacggttt
    20881 gccccacggg ttaaaccgaa aattgagcct cgtgcatacg gatcccaata tggagcacct
    20941 aagccggtaa aggcaggtac aacataaaca ccgttagagt catcttcttt agtggcaaaa
    21001 tattcgctgt caaagctatc gtgaacaatt ttcagctcat cacgcagcca ttgaatagac
    21061 gcaccggcaa taaatactga accttccaac gcatattccg gctcgccttt tgcgttacac
    21121 gcaatggtcg ttaataaacc gttttcagat tgaatcgcag tgttaccggt gtgcatcaac
    21181 ataaaacagc ctgtaccata ggtattcttc gcttgtcctt ctttcacgca taaatgaccg
    21241 tagagagcgg cttgttggtc acctgcaata cccgcgaccg gaatacgcac accgccttga
    21301 ccgccgatat tagtttgccc gtaaacttct gatgaatttt tcacttcagg taacattgag
    21361 cgtggaatat tgagcaattc cagcatttta tcgtcccatt gtttggtgtg aatgttaaac
    21421 aacatagtac gagaagcgtt ggtgtaatcg gtaacgtgta cccgcccttg ggttaatttc
    21481 cacaccagcc aagtatcgac cgtaccgaac agcaattcgc cacgttctgc tttttctctt
    21541 gccccttcta cgttatctaa aatccacttc actttagtgc cggagaagta cggatcgact
    21601 accaagcctg tcgttttacg aatatattcc tcgtgtccgt ctgcttttaa tttatcggta
    21661 atatccgatg tgcgacgaca ttgccacaca atcgcattat aaacaggttt accggtctct
    21721 ttttcccaca caatcgtggt ttcacgttgg tttgtgatcc cgattgcggc aatgctatcc
    21781 ggcttaatac cggcttttgc caccacttca tttaaggtgg aactttggct tgaccaaatt
    21841 tccatcgggt tatgttctac ccagcctgct tgcggataaa tctgggtaaa ttcacgctga
    21901 gccacttcaa ccacattggc atttttatct aataaaaccg cacgagagct ggttgtacct
    21961 tggtcgagag cgatgatata ttgtttttcc atagattact cctgagtatt tgctggaaga
    22021 ttgttatgaa tgaggttttt ataaccccaa gcaccgaata atgcaccgca gattggggcg
    22081 acaatcggaa tgatgaaata cggaatttct tttccgcctg ttaaagcaat ttcaccccaa
    22141 ccggcaagat aagcaaagag tttcggacca aaatcacgag ccgggttcat cgcaaagccg
    22201 gttaacgggc cggttgctcc accaattacc gcaatcaata aaccgatgag taatgcggct
    22261 aaggctttat tcggcaagcc gtttttatca tcgccaatcg ctaaaatagt ggacatcaac
    22321 accacagtaa tcacaaattc aacgatgaag gcggtaacca atgtaatatt agggtttgga
    22381 taggtggaga acacaccggc aaagccaaca gtttcgcccc gagtaatgcc ttgagcggct
    22441 tcggcggcag taaagagatc gctatacata aaataaatca gtgcgacaga gcaaaacgct
    22501 ccggcaactt gggcgatgac atagggcaaa attttatgct tttcaaagcc gtagaatgcg
    22561 gcaagtgcta tagtgaccgc agggttaagg tgagcaccgg aaataccggc agaaatgtag
    22621 attgccatgg aaacaccaag cccccaaacg atggaaattt cccataaacc gaaattcgca
    22681 ccggctacct gagcagcagc aacacaacca gcaccaaaga aaaga
//
LOCUS       DANMCL010000041        22617 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.041, whole genome shotgun sequence.
ACCESSION   DANMCL010000041 DANMCL010000000
VERSION     DANMCL010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22617
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.041"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            11..688
                     /locus_tag="PXF40_001369"
     CDS             11..688
                     /locus_tag="PXF40_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802703.1"
                     /translation="MNSIIRKEWFTASEVAGMGNLPEQPSNVTRRATKNNWLKRQIEG
                     KRGVAFEYHYSSLPISVQQELGFAQTAVKEEPRTLVAAQTADEMERVPFYNVQASAGF
                     GAFNSEVYAPDDYIGLSKRWLDVRGFYLSYLAFITASGDSMYPTISDGDMLLVNRATT
                     QPKDGKIYVFRQGEQLWVKRVQGIMGGIRLISDNKELYSPIDVIFDETLDFEVIGQVV
                     YIGHEMI"
     gene            736..3588
                     /locus_tag="PXF40_001370"
     CDS             736..3588
                     /locus_tag="PXF40_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5802704.1"
                     /translation="MVQAVSFSHFFAIHYFYFFLHKTKGQCTAKPLFSILLFHLFPKN
                     SAKFLLFFYFLVLMVLYSNEVANGKLLITGGTNLNGTLSAEGTSEIILSGRPTPHAYD
                     KVANKEVLIEGDWINRSFNATIFAAKDNGKLEISRNVANINGNFNLTDNATAQIGFTQ
                     GTSQACIRSDRTGVATCNINATLSETDLNSWERTKVAGNVSLADNSTFSLGSKADLTG
                     SITAQESTKVQLNDGSIANLTGLSTTGIFNGANGSTVNLSGVWTTLTNTVVDVLNVAN
                     GSQIHLNTPTATKQNTLTANTLTGNGIFKFVADLTKTASDIVTIKDTASGQFSIEIST
                     NGSAHSAQKIKLFETTNEEDFSLNLANEVRSGEYRYHLLKEGNVYYLNPEKEEEPKIT
                     QKGPSETADPLPEYTGDIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNG
                     NAHLIASELTAQTNAVLGVTTVLDHVIHSEGTQKQNTLTANTLTGNGIFKFVADLTKT
                     ASDIVTIKDTASGQFSIEISTNGSAHSAQKIKLFETTNEEDFSLNLANEVHSGEYRYH
                     LLKEGNVYYLNPEKEEEPKITQKGPSETADPLPEYTGDIEYSEKGPGETADPLPEYTG
                     DIEHSEKGPGETADPLPEYTGDIEHSEKGSGETAEPLPKYNGNAHLIASELTAQTNAV
                     LGVTTALDHVIHSEGTQNWKVWSKTDYQTTEHRSAGYGFNQDANVIHLGLEKALDNQV
                     TLGMILSQSKARNNFDHYYSGKGRLTMLSMYAKKTWQNGVFVAIDTGFGKASNRLTYQ
                     ANTVKLDRSVFVTGLSIGKAWESANVNIIPSFSARYHHLSSAGNQLVDAKIETNAVDL
                     LALQAGLSINKTLELNGLQIKPEIGSYFVDASHGKLRTRFNNLQIEQQMGRYFKQEAG
                     ISANYRNINAGIQAGFLTGNTLNKQRYISFKVTYEW"
     gene            complement(3663..4499)
                     /locus_tag="PXF40_001371"
     CDS             complement(3663..4499)
                     /locus_tag="PXF40_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HDL5802705.1"
                     /translation="MLPHIYIGTGGYADTDLIGTLYPFGTAKEDFLFVYSQHYDTLEI
                     NSTFHAPIGQKAFEGMVQKAEGRLNFSVKLHQDFSHQRTATLDQAQLFLNALAPFTAE
                     GLLANLFVQFPTQFERMPLNRRYLAELCQWFADYPLAIEFRHPSWHIPAVFDTFAKSS
                     NLIWCNVDYPQNIGLPAFHFFANQRTAYLRLHGRNPNWWKGQSAAERHDYRYSDEELK
                     GLAELLFSRRTEFDRLYLYFENTTKSHAFYNIQTLKGFLAEKGFQIKPVPENLLGQQS
                     LF"
     gene            4607..5482
                     /locus_tag="PXF40_001372"
     CDS             4607..5482
                     /locus_tag="PXF40_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5802706.1"
                     /translation="MWIWFTLLAAVAQAGRNAFQKQLSVNVPVLGVTLARFFYAVPLA
                     SGYLYFLYQYDDNLNIPHFPPLFFVYAIGAGLAQILATSLMVQLFHLKNYAIGVGLAK
                     SEAVWAALLGVLFFGVTISGIGWLGVVLGGVAIFLMTGSGNLRQLSWKTLFLGIASGL
                     CFALTSLWVREASLQLNSHYLLSAAWVLFSVISFEAVILVIYLALLQKETLIKFFRFP
                     KLGMLTSLFSFLGSFGWFNAMSLNHVAFVKTLGQVEIFFILGISYFVFKERLKIQDFI
                     GLILVVIAAILVVLG"
     gene            5618..6058
                     /gene="nudB"
                     /locus_tag="PXF40_001373"
     CDS             5618..6058
                     /gene="nudB"
                     /locus_tag="PXF40_001373"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HDL5802707.1"
                     /translation="MNYKNPHSILVVIYAKNTQRVLMLQRKDDPDFWQSVTGSINIGE
                     TPLEAAEREVSEETGLQTFEQKQPLVDCQKQIEFEIFPHFRYKYAPNITHCVEHWFLL
                     PLDSEQEPILTEHLAYRWVSVEDAVRLTKSPNNAQAIQEYLTSK"
     gene            6071..6811
                     /locus_tag="PXF40_001374"
     CDS             6071..6811
                     /locus_tag="PXF40_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5802708.1"
                     /translation="MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDTS
                     SNPRLRAAVDKALSSNMTRDTINRAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECL
                     SDNANRTISQVRPSFTKCGGNLGTEGSVGYLFSKKGLILVANADEDALTEAAIEAGAD
                     DIQPQEDGSFEIYTAWEDLGSVKDGIEAAGFKIENAEVTMIPSTTVELDAETAPKLLD
                     LINRLEDCDDVQNVYHNGEISDEVAALL"
     gene            6941..7468
                     /locus_tag="PXF40_001375"
     CDS             6941..7468
                     /locus_tag="PXF40_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802709.1"
                     /translation="MKLVKFVPALAATLVLAACSNANTQSAPQQAQDAVTKVAEQATQ
                     QVNEIAGNAPRASGAVKVEKATDGAKSIVYRCQSGKRVTANYVFQGEEAKAVNLLVQS
                     GGKTQKIPTLTRDASNQDSTSFKTDKYSWDLDTGFTLSSNGQSGMLTKYGAKTDTIVA
                     KLCDVDKALTSKLNK"
     gene            7535..8113
                     /gene="ruvC"
                     /locus_tag="PXF40_001376"
     CDS             7535..8113
                     /gene="ruvC"
                     /locus_tag="PXF40_001376"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HDL5802710.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQNGRQLEYLGSGAIRTTAEDLPTR
                     LKRIYAGVSEIITQFQPNMFAIEQVFMAKNPDSALKLGQARGTAIVAAVNHDLPVFEY
                     AARLVKQTVTGIGSADKVQVQDMVTRMLKLSAKPQADAADALAIAITHAHSIQHSLIV
                     AKQSQQNVSSEKEQILALMKTRYSRGRFRLKG"
     gene            complement(8179..9459)
                     /gene="murA"
                     /locus_tag="PXF40_001377"
     CDS             complement(8179..9459)
                     /gene="murA"
                     /locus_tag="PXF40_001377"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HDL5802711.1"
                     /translation="MEKFRVYGPFSLNGTVDISGAKNAALPILFAAILAEKTVTLKNV
                     PDLKDVDTTFKILRQLGVTVEKGSDKGVVHIDASKINNYVAPYELVKTMRASIWALAP
                     LVARFQLGQVSLPGGCTIGARPVDMHISGLEKMGAKIELDEGYVKATSNGRLNGARIY
                     MDKVSVGATLSVMMAGTLAKGTTVIENAAREPEIVDTADFLNAMGAKISGAGTDMITI
                     EGVEHLGGCEHSVVPDRIETGTFLVAAAISGGRITCRNTKADTLDAVIEKLREAGMQV
                     DVTENTITLDSLGRRPKAVNIRTMPHPGFPTDMQAQFTLLNTVAEGTSRITETIFENR
                     FMHIPELIRMGAKAEIEGNIAICYGVEQLKSAEVMATDLRASISLVLAGCIATGETIV
                     DRIYHIDRGYEHIEEKLRQIGARIERFSAPFEGE"
     gene            complement(9569..9829)
                     /locus_tag="PXF40_001378"
     CDS             complement(9569..9829)
                     /locus_tag="PXF40_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5802712.1"
                     /translation="MNPSQIEEILKQALSDATEVHAQGENAHFGVIVVSDSIASLSKV
                     KQQQAVYAPLAEYFTTNAIHALTIKVFSVEKWKTERLLNMVG"
     gene            complement(9862..10185)
                     /locus_tag="PXF40_001379"
     CDS             complement(9862..10185)
                     /locus_tag="PXF40_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HDL5802713.1"
                     /translation="MPQKTLQWDIQQNNESLFVKLSGELTRNTLLPLWKQRASFLSPT
                     GKQSLYWDLKEITRIDSAGFTLLAELLNHYHKIIPNSLINTPDSVRTLAALYDLDGWF
                     EQFII"
     gene            complement(10197..10832)
                     /gene="mlaC"
                     /locus_tag="PXF40_001380"
     CDS             complement(10197..10832)
                     /gene="mlaC"
                     /locus_tag="PXF40_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HDL5802714.1"
                     /translation="MLKNIKKIIVTGLVAVSALFSTTAFAETSPYVLMQQTADKLFGD
                     IKANQAKIKSNPEYLRTIVRNDLMPHVHVKYAGQLVLGKNLSAATDAQKEAFFNAFGQ
                     FVEQSYAQVLTQYQDQSVQIESPKSVDGKSIVSIRVNVSGKGAAQPIKLDFKWRKNSK
                     TGEWQAYDMAAEGVSMVATKQNEWAGVIRQKGIDALIAQVAQSAKQPITLK"
     gene            complement(10878..11402)
                     /gene="mlaD"
                     /locus_tag="PXF40_001381"
     CDS             complement(10878..11402)
                     /gene="mlaD"
                     /locus_tag="PXF40_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HDL5802715.1"
                     /translation="MRQSIKYEFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLY
                     ATFDNIGGLKVRAPIKVGGVVVGRVADISLDNKTYTPKVALAVNESFNQIPDTSSLSI
                     KTSGLLGEQYVALNVGFVIEGETAMMKEGDTFVDTNSAMVLEDLIGQFLYGDKKSDKT
                     EDEKASDSAEPKAE"
     gene            complement(11423..12199)
                     /gene="mlaE"
                     /locus_tag="PXF40_001382"
     CDS             complement(11423..12199)
                     /gene="mlaE"
                     /locus_tag="PXF40_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HDL5802716.1"
                     /translation="MVNFISSIGAVVINFIRTLGRSAFMLWGALIGKPEFRKHTPLLI
                     KQLYVLGVQSLLIIMLSGLFIGMVLGLQGYVVLVDFAAESSLGTLVSLSLLRELGPVV
                     TALLFAGRAGSALTAEIGLMKATEQLSSLEMMAVDPLRRIIAPRFWAGVISMPVLAAI
                     FTAIGIWGGSLVGVDWKGVDGGSFWSVMQNSVNTSDLINGFIKSVIFAFAVVWIALFN
                     GYDCVPTSEGISQATTRTVVNASLVILGLDFILTAIMFGG"
     gene            complement(12192..12995)
                     /gene="mlaF"
                     /locus_tag="PXF40_001383"
     CDS             complement(12192..12995)
                     /gene="mlaF"
                     /locus_tag="PXF40_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HDL5802717.1"
                     /translation="MTKTENLVEVKNLTFKRGERVIYDNLNLQVQKGKVTAIMGPSGI
                     GKTTLLRLIGGQILPESGEILFDGRDICKANNKELYEIRQRMGMLFQSGALFTDISTF
                     DNVAFPIREHTRLPEELIRKLVLLKLEAVGLRGAANLMPSELSGGMARRAALARAIAL
                     DPDLIMYDEPFTGQDPISMGVIVELIKELNQALNLTSIVVSHDVKEVLSIADYAYIVA
                     DKRVIAEGTPEILQASEDPQVVQFLAGKADGPVRFHYPAKDYTEELFNG"
     gene            13220..14614
                     /locus_tag="PXF40_001384"
     CDS             13220..14614
                     /locus_tag="PXF40_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HDL5802718.1"
                     /translation="MNKTMKKSFLTAFILGSTIAAMPAYAEATLPTAVNGQAVPSLAP
                     MLEKVRPAVVSIAVEGKTKGDSRRSREIPEEFEFFFGPHADLFGNRSSAPRNFRGVGS
                     GAVINAEKGYVITNNHVIDNADKITVKLEDGREFKAKLVGADPLSDVALIQVEDPKNL
                     TEIKFADSDKLQVGDFTVAIGNPFGLGQTVTSGIISALGRSTGQSDEGYENYIQTDAA
                     VNQGNSGGPLINLNGELIGINTAIISPSGGNAGIAFAIPSNMANSLVTQIIEFGEVKR
                     GMLGIKGGELNADLAKEFNISTQQGAFVSEVLPDSAAAKAGFKAGDVITEINGQKIRS
                     FSELRAKVATSGVGKEIELTYLRDGKEAKAKVTLQSDSEAKVTASNLIPALKGADFNN
                     YNAKGIKGVEISNVEKGSIAEMRSLKKGDIIIGVNRHSVENIADLRKILETKPSVVAL
                     NIVRDGANFYVILQ"
     gene            complement(14666..15427)
                     /locus_tag="PXF40_001385"
     CDS             complement(14666..15427)
                     /locus_tag="PXF40_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C biogenesis protein"
                     /protein_id="HDL5802719.1"
                     /translation="MKTREQLSQENYQQAVKFAQHFADDVRQEFEREAEQRYQFERTQ
                     FEQSVLQNNAQNRPLAKIASLSCVAILLLAMTYYGLSGRYQVVQSGLQQHQDFQQQMS
                     DAHGTSKNERYILSLQNQLRENPNNGDLWYELGQAYALSNDFDSALVCYDNAEKLLGK
                     RAAILGAIATARYYDNGQKMTVEIQAIIEQALQLDKNENASLLLLASDSFLNNNFQQA
                     LDNWRKVLDSNNDSINRRAIIQSMEMARQMLNSQQ"
     gene            complement(15414..15866)
                     /gene="nrfF"
                     /locus_tag="PXF40_001386"
     CDS             complement(15414..15866)
                     /gene="nrfF"
                     /locus_tag="PXF40_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HDL5802720.1"
                     /translation="MRNSIISIGFLQKIRKILPLVFGLLLFVGTVQAEMVDTFQFQNE
                     ADRVRAISLARSLRCLQCQNQNLVESNATAAYNMRIEVYEMVNQGKSNEEIIRIMTER
                     FGSFVNYDPPFTPQTWVLWGLPVGLFSLLFLAILWRTRKNKGNKNENA"
     gene            complement(15856..16389)
                     /locus_tag="PXF40_001387"
     CDS             complement(15856..16389)
                     /locus_tag="PXF40_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HDL5802721.1"
                     /translation="MKKILLLIPLLLLVVIVGFLTVPLMNKDALAPTEDWQGKPFPEF
                     VGKNLLDSNAHLNNNSLPKEPYILNVWVSWCTWCIKEFPILLELKQKGVPIVGLTYSD
                     RPNDALNALKNWGNPFSLIIDDYEKGFLIQTLKVSSAPSSYLIDKHGVVRYQQKGYNP
                     DFAQDFLPKLEALRNEK"
     gene            complement(16386..18290)
                     /gene="nrfE"
                     /locus_tag="PXF40_001388"
     CDS             complement(16386..18290)
                     /gene="nrfE"
                     /locus_tag="PXF40_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfE"
                     /protein_id="HDL5802722.1"
                     /translation="MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTY
                     LQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLPDFFKFAATWGGHEGSMLFWLTA
                     LVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL
                     NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFL
                     TAGIILGAWWAYYELGWGGWWFWDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTI
                     LLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFGLSFIALALFAFRAN
                     LWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNS
                     VFTPLALLLMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFA
                     LQPLPTIFISLAIWIILTHLPYSQKMWQIRPLAMRLAHIGFAVCVIGAMMNSYYGDEI
                     GVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPERRYYDV
                     RTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLA
                     LFGYRRENKK"
     gene            complement(18560..19507)
                     /gene="nrfD"
                     /locus_tag="PXF40_001389"
     CDS             complement(18560..19507)
                     /gene="nrfD"
                     /locus_tag="PXF40_001389"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HDL5802723.1"
                     /translation="MNEYVPFQTPNLVWDGTIAIYLFLLGISSGAVQLAIAYRNSGVK
                     MEKPSQNWIIRSAAILGTLPTIIGLLLLIFHLTKPWTFWKLMFNYNFTSVMSMGVMLF
                     QLYMAVLVVWIAIMFKDWIVRYLPVVSGLIDFAEAKLLKPIEFILFVLAAVLGAYTGF
                     LLSALVSYPMLNNPVLPALFLASGASSGIAATFLVILLAGKLSGESHEVHFMHKFEVP
                     IMVTELGLIVAFFVGLHFGGADKSLALTHALNGFWGNVFWIGVMLIGIAIPLVANIFG
                     SHRLKHNVKFIILISVFDLIGVLCLRYFILYAGQLTVAS"
     gene            complement(19507..20184)
                     /gene="nrfC"
                     /locus_tag="PXF40_001390"
     CDS             complement(19507..20184)
                     /gene="nrfC"
                     /locus_tag="PXF40_001390"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HDL5802724.1"
                     /translation="MTCTRRDFVSGAGAIAVVASTGLATSITLATEKEQKKIRYAMVH
                     DETACIGCTACMDACRTTNKVPEGVSRLEIIRSEPFGEFPNVQYEFFRQSCQHCTNAP
                     CVSVCPTGASFIDPETGIIDVHSDLCVGCQYCIAVCPYRVRFIHPEKKSADKCNFCRD
                     TNLAEGKQPACVEACPTKALTFGDMNDPSSDIFHKVKNNPVYRTKTALGTEPNLYHIP
                     FGKGEHR"
     gene            complement(20184..20840)
                     /gene="nrfB"
                     /locus_tag="PXF40_001391"
     CDS             complement(20184..20840)
                     /gene="nrfB"
                     /locus_tag="PXF40_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HDL5802725.1"
                     /translation="MKKLISKAGRAVALIQAVVFAGFFAISSANALMPEQPKPLWQSE
                     TADDAKVAQDARRDPNKYCTQCHESANATGKPFHHAGKHFQKDVKSPNNGEPLTCISC
                     HGNISESHRKGAKDVMRFNPHGKASNPSLERSVNEQNQVCFACHTAEKLREKFWAHDT
                     HATKIACTNCHEIHPEKDPMKDIPEKDRIKLCTDCHTKIHSGEFKNPEMKATEAKGTK
                     "
     gene            complement(20859..22361)
                     /gene="nrfA"
                     /locus_tag="PXF40_001392"
     CDS             complement(20859..22361)
                     /gene="nrfA"
                     /locus_tag="PXF40_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HDL5802726.1"
                     /translation="MKFLIKSLAVATISILGCLQTALAEEAKTESLTDKAVKHEKLGV
                     KIESANHLFAEKYPLQYDSWKSTAKSTDRGSALEADPRYVILWAGYAFAKDYNKPRGH
                     FYAVTDVRDILRTGAPKDENDGPQPMACWTCKGPDVPRLIEEKGERGYFDPKWAKYGA
                     EIVNSIGCADCHDTTSEEFKQGKPALRVARPHVLRALNTVGWKFEDLDKHGKRPAVCA
                     NCHVEYYFKNKTDVTFPWDKGVDVDSIEKYYDEINFTDWTHALSKAPMLKTQHPDFEV
                     WSQGTHGKNGVTCIDCHMPKVKDKDGKVYTDHKIGNPFDQFEATCKTCHEQSKETLEK
                     RVKEYKHEVKEAMIRLEDQLVKAHFEAKAAWEAGATQEEMKEILMAIRHAQWRWDYSA
                     AGHGNHFHAPDVMLRTIATGIDRAADARAKLGVVLAKHGVTTPVAIPDISTKEKAQLA
                     IGLDIPKEQAAKDEFLKTVVPQWEKEARAKGLLPAEEADKPVAAPKAEAK"
BASE COUNT         6824 a         4876 c         4550 g         6367 t
ORIGIN      
        1 aaggggtttt atgaattcta taattagaaa ggaatggttt acggcatctg aagtagctgg
       61 aatgggaaat ttacctgaac aaccatcaaa tgtaacaaga agagctacca aaaataattg
      121 gctcaaaaga caaatagagg gaaaaagggg ggttgctttt gaataccact acagctctct
      181 cccaataagc gtgcagcaag agttaggctt tgctcaaacg gcagtaaaag aagagcctag
      241 aacattagtg gcagcccaaa ctgcagatga aatggaacgt gtgccgtttt ataatgtaca
      301 ggcttcagca ggctttggtg ctttcaatag cgaggtgtat gcccctgatg actatattgg
      361 gctaagtaaa cgatggctag atgtgcgtgg cttctatttg agctatcttg catttattac
      421 cgcttcaggt gattcaatgt acccaaccat cagtgatggc gatatgctat tggtaaaccg
      481 agccaccacc cagcctaaag acggtaaaat ttatgtgttc cgccaaggcg agcagctttg
      541 ggttaaacgt gtgcaaggca ttatgggcgg tattcgctta atcagcgata ataaagagct
      601 atacagccct attgatgtga tttttgatga aacgttagat tttgaggtta tcgggcaggt
      661 tgtgtacatt ggacacgaga tgatttaaac gccatttaaa gctacttaaa tcatttttac
      721 tttttcgttg ttttaatggt acaagcggtt agttttagcc attttttcgc aattcattat
      781 ttttactttt ttctacataa aacaaagggg caatgcaccg caaagcccct gttttcaata
      841 cttctgtttc acttattccc gaaaaattcc gccaaattcc tattattctt ttatttctta
      901 gttttaatgg ttctatacag taatgaagta gcaaacggca aattgcttat cactggggga
      961 acgaacctca acggtacgct ttctgcagaa ggtacaagcg aaatcatttt atcgggccgt
     1021 ccaacacctc atgcctatga taaagtagcg aataaagaag tcctgattga aggcgactgg
     1081 atcaaccgat cgttcaacgc aacaatcttt gcagctaaag acaatggcaa gcttgaaatc
     1141 agccgtaatg ttgccaatat taacggtaat tttaatttaa cagataatgc taccgctcaa
     1201 attggtttta cccaaggtac ctcacaagca tgtattcgct ctgaccgcac aggcgtagca
     1261 acctgtaata ttaacgctac tttatcagag actgatttaa acagctggga gagaaccaaa
     1321 gtggctggca atgtctcttt agctgacaat tcaacatttt cgttaggcag taaagcagac
     1381 ttaactggct caattacagc tcaggagtcc actaaggttc aacttaatga tggaagtatt
     1441 gctaatttaa ccggcttgag tacaacagga atatttaatg gcgccaatgg ttcaaccgtt
     1501 aatctttctg gggtatggac aaccttaacc aacactgttg tagatgtctt gaatgtcgca
     1561 aatggtagcc aaatccattt aaacactcca actgcaacaa aacagaatac gcttaccgct
     1621 aataccctca cagggaacgg catctttaaa tttgtcgctg atctgacgaa aacagcgagc
     1681 gatatagtca caattaaaga caccgcaagc ggtcaatttt cgatagaaat tagcacaaat
     1741 ggtagcgccc attcagccca aaagattaaa ttatttgaaa caacaaatga agaagacttt
     1801 tctcttaatt tagcaaatga agtgcgctca ggcgaatatc gctaccattt actcaaagaa
     1861 gggaatgtgt attacctcaa tccagagaaa gaggaagaac ctaaaattac tcaaaaaggg
     1921 ccaagtgaaa ccgctgaccc attacctgaa tacaccgggg atattgagca ttctgaaaaa
     1981 gggccgggtg aaactgctga tccgttacct gaatacacag gcgacattga gcattcagaa
     2041 aaaggatcgg gtgaaaccgc tgagccatta cctaaataca atggaaatgc acatttgatc
     2101 gcatccgagt taactgcgca aactaatgct gtattaggtg taactacagt attagatcat
     2161 gtaattcatt cggaagggac ccaaaaacag aatacgctta ccgctaatac cctcacaggg
     2221 aacggcatat ttaaatttgt cgctgatctg acgaaaacag cgagcgatat agtcacaatt
     2281 aaagacaccg caagcggtca attttcgata gaaattagca caaatggtag cgcccattca
     2341 gcccaaaaga ttaaattatt tgaaacaaca aatgaagaag acttttctct taatttagca
     2401 aatgaagtgc actcaggcga atatcgctac catttactca aagaagggaa tgtgtattac
     2461 ctcaatccag agaaagagga agaacctaaa attactcaaa aagggccaag tgaaaccgct
     2521 gacccattac ctgaatacac cggggatatt gagtattctg aaaaagggcc gggtgaaact
     2581 gctgatccgt tacctgaata cacaggagac attgagcatt cggaaaaagg gccgggtgaa
     2641 actgctgatc cgttacctga atacacagga gacattgagc attcagaaaa aggatcgggt
     2701 gaaaccgctg agccattacc taaatacaat ggaaatgcac atttgatcgc atccgagtta
     2761 actgcgcaaa ctaatgctgt attaggtgta actacagcat tagatcatgt aattcattcg
     2821 gaagggaccc aaaattggaa agtatggtct aaaacagatt atcaaacgac agagcatcgc
     2881 tctgccggat atggatttaa ccaagatgcg aacgttatcc atctaggatt agagaaagcc
     2941 ttagataatc aggtcacact tggtatgata ttatctcaat caaaagcgag aaataatttt
     3001 gaccattatt atagcggtaa aggtcgctta acaatgctat caatgtatgc gaagaaaaca
     3061 tggcaaaatg gtgtttttgt tgcgatagat accggttttg ggaaagcaag caatcgctta
     3121 acttatcaag caaatacagt aaaattagat cgttcagtat ttgtaacagg gcttagtatc
     3181 ggtaaagcat gggaatctgc aaacgtgaat ataatcccat catttagcgc ccgttatcat
     3241 catttatctt cagcaggtaa tcaacttgta gatgcaaaaa tcgaaacaaa cgctgttgat
     3301 cttctcgctc ttcaagctgg tctgtcaatt aataaaacgc ttgaactaaa tggcctgcaa
     3361 ataaaaccgg aaataggtag ctattttgtt gatgcaagcc atgggaaatt aagaacacgt
     3421 ttcaataatt tacaaataga gcagcaaatg gggcgttatt ttaaacaaga agcaggtata
     3481 tccgctaatt atcgcaatat aaacgcagga attcaggcag gtttcttaac ggggaatacg
     3541 ctaaataaac agcgttatat ctcgttcaaa gttacatatg aatggtaaat attgagatta
     3601 agggctatcc attactaaat ggcatggccc tttatttact cctcaacaat gtaaattacc
     3661 catcaaaaca aactctgctg cccaagcaaa ttctccggca caggtttgat ttgaaatcct
     3721 ttttccgcca aaaagccttt tagggtttga atattataaa aggcgtggct tttagtggtg
     3781 ttttcaaagt agagatagag cctgtcaaat tccgttctgc ggctaaaaag caattctgcc
     3841 aagcctttta attcctcgtc tgaatagcgg taatcgtggc gttctgccgc actctgccct
     3901 ttccaccaat tcgggttacg accatgtaag cgtaaataag cagtacgttg gttggcaaaa
     3961 aagtgaaatg ccggtaagcc gatattttgt gggtaatcca cattacacca aatcagatta
     4021 gagcttttcg caaaggtatc aaacaccgcc ggaatatgcc agcttgggtg gcgaaattca
     4081 atcgctaacg gataatccgc aaaccattgg cacaactcgg caaggtaacg gcggttaagt
     4141 ggcatacgtt caaattgagt tgggaactga acaaataaat ttgccaataa cccttcagcg
     4201 gtgaacggag ctaacgcatt aagaaataat tgtgcttgat ctaaagtcgc cgtgcgttga
     4261 tggctgaaat cttgatgcag tttcaccgaa aaattcagcc gaccttccgc tttctgcacc
     4321 attccttcaa aggctttctg cccgatgggg gcgtggaatg tgctgttaat ttccagcgtg
     4381 tcgtaatgtt ggctatagac aaagagaaaa tcctcttttg cagtgccgaa tgggtaaagc
     4441 gtgccgatta aatctgtgtc ggcatagccg ccggtgccaa tataaatatg agggagcatt
     4501 gtgtttattc tttcaatttt ttgcaaattt taatggtttt ttaaccgctt gcaaactgag
     4561 aataaaagag taagatttgg ctatcttttc ttatttcatc atcattatgt ggatttggtt
     4621 tactctgctg gcagccgtgg ctcaagccgg tcgcaatgcc tttcaaaagc aattaagcgt
     4681 caatgtgcct gtattggggg taacgctcgc ccgctttttc tatgctgtgc cgttggcaag
     4741 cggttatctc tattttttat accaatatga cgataacctc aacattcccc attttccacc
     4801 gctgtttttt gtatatgcta tcggggctgg gttggctcaa attctggcaa cttcgctaat
     4861 ggtgcaactt tttcacttaa aaaattatgc aataggtgtc gggctggcga aaagcgaggc
     4921 agtatgggcg gctttactgg gcgtgttatt ttttggtgta accatcagtg gcattggctg
     4981 gcttggcgtg gtactaggtg gagtggcgat tttcttaatg accggcagcg gtaatctacg
     5041 ccaactttcg tggaaaacac tctttctcgg catagccagc ggtttatgtt tcgccctcac
     5101 atcactttgg gtgcgagagg caagcctgca actcaacagc cactatttgc tttcagcggc
     5161 gtgggtactt tttagcgtga ttagctttga ggcagtgata ttggttatat acctagctct
     5221 tctccaaaaa gagacactga ttaaattctt tcgttttcca aaattaggta tgttgaccag
     5281 cctgttttca tttctcggct cattcggttg gttcaatgca atgagcctga accacgttgc
     5341 ctttgtaaaa acgcttggac aagtggaaat tttctttatt ctcggtattt cctattttgt
     5401 gtttaaagaa cggcttaaaa ttcaagattt tatagggctg attttagtag tgattgccgc
     5461 aatcttggtg gtgctgggct agatcggatt tttacgtttt ttatctagct ttgtagggtg
     5521 ggcgtaagcc cacgcaaaac caataaatca tttatccgtg ggcttacgcc caccctacga
     5581 tacctaaaaa aattaaattt cacatcttag taataaaatg aactataaaa atcctcatag
     5641 tatccttgtg gtgatttatg ctaaaaatac ccaacgagta ttgatgctac aacgcaagga
     5701 cgatcctgat ttttggcaat cggtgaccgg ttcgatcaat attggagaaa caccgctgga
     5761 agcagcagaa cgggaagtga gcgaagaaac cggtttgcaa acttttgagc aaaaacaacc
     5821 gcttgttgat tgccaaaagc agatagaatt tgaaattttc ccgcattttc ggtataaata
     5881 cgcacctaat atcacacatt gtgtcgaaca ttggtttttg ctgccacttg atagtgagca
     5941 agagcctatt ttaaccgaac atttggcata tcgttgggtt tcagtggaag atgcggttcg
     6001 actgactaaa tctcccaaca atgcccaagc aatacaagaa tatttaacat caaaataagg
     6061 aaacaacaga atggcaggcc atagtaagtg ggcaaatatt aaacaccgta aagcggcaca
     6121 agatgcacaa cgcggtaaaa tttttactaa attaattcgt gaattggtga ctgccgccaa
     6181 actcggcggt ggtgatacct cttccaaccc tcgtttgcgt gcggcggtgg ataaagcgtt
     6241 atccagcaat atgacccgtg ataccatcaa ccgtgcaatc gagcgtggtg taggcggtgg
     6301 cgatgatacc aatatggaaa ccaaaatcta cgaaggttac ggcccgggtg gtacagcagt
     6361 gatggtggaa tgtttaagtg ataacgctaa ccgtacgatt tcccaagttc gtccaagttt
     6421 cacaaaatgt ggcggtaacc taggtactga gggttcggta ggttatttat ttagcaaaaa
     6481 aggcttaatt ttagtggcaa atgccgatga agatgcctta actgaagctg ctattgaggc
     6541 cggtgcggac gatattcaac cacaagaaga tggtagcttt gaaatttata ccgcttggga
     6601 agatttaggc tcagtgaaag acggcattga ggctgcaggc tttaaaattg agaatgcaga
     6661 agtaacaatg attccatcaa ctaccgttga acttgacgca gaaactgcac caaaacttct
     6721 tgatttaatc aaccgccttg aagattgtga tgatgtacaa aacgtttatc acaatggtga
     6781 aatcagtgac gaagtcgctg cattactgta ataaaaaaat cacgcaaaat aagcataatt
     6841 taggttatgc ttatttttta tgaacttttt tcctatatta ctgactaacc taatgtagtt
     6901 tatatgctac tactttacta taacatttta aggagagtct atgaaattag tgaaatttgt
     6961 ccctgcccta gcagcaactt tagtattagc cgcttgctct aatgcaaaca cacaatctgc
     7021 tcctcagcaa gctcaggacg ctgtgactaa agtggctgaa caagcaacac agcaagtgaa
     7081 tgaaattgca ggtaatgcac ctcgtgcaag tggtgcagta aaagtagaaa aagcaactga
     7141 tggtgcaaaa tcaattgtat atcgttgcca aagtggtaaa cgtgtaactg cgaattatgt
     7201 cttccaagga gaagaggcaa aagcagtaaa tctattagtc caaagcggcg gtaaaacaca
     7261 aaagatccca acattaactc gtgatgcctc aaaccaagat tctacttcat tcaaaacgga
     7321 taaatattct tgggatttag acacaggctt taccttatca tctaatggcc agtcaggtat
     7381 gctaaccaag tatggtgcta aaacagatac catcgttgct aaattatgtg atgtagataa
     7441 agcattaacc tcaaaattaa ataaataatc tttcttgatt ttactactca taagcgagaa
     7501 gataatatct tctcgcttat tttattgcac aaagatggct attattttag gaattgaccc
     7561 cggctcaagg gtaacaggtt acggtgtgat tcgccaaaac gggcgacagc tggaatattt
     7621 aggaagtggg gctattcgaa ccacggctga agatctgcct acccgcttaa aacggattta
     7681 tgcaggcgtg agtgaaatca tcactcaatt tcaaccaaat atgttcgcca tagagcaggt
     7741 atttatggca aaaaaccctg attctgcctt aaagctcggg caggctcgag gaacagcgat
     7801 tgtagcagcg gttaatcacg atttacctgt gtttgaatat gccgcccgat tagtcaaaca
     7861 aaccgttacg ggaattggtt ctgctgataa agtacaagtg caagatatgg taacccgtat
     7921 gcttaaactc tccgccaaac cacaagccga tgcggctgat gcattagcca ttgcgattac
     7981 ccacgctcat tcaatccaac attcactgat tgttgctaag caaagccagc agaatgtgag
     8041 tagtgagaaa gagcaaattt tagcactaat gaaaacccgt tatagccggg gaaggtttag
     8101 gttaaaaggc taactcaata taaaatgacc gcttggaact aatgtttcaa gcggtcattt
     8161 tttgagaaaa ttttacaatt actcgccttc aaaaggagct gagaaacgtt caattctcgc
     8221 cccaatctga cgtaattttt cttcgatgtg ttcatagcca cggtctatgt ggtaaattct
     8281 atccacaatc gtttcacccg ttgcaataca gcctgccaac actaagctga tggaagcacg
     8341 caagtcagtt gccattactt ctgctgattt taactgctct acaccatagc aaattgcaat
     8401 attaccttca atttccgctt tggcacccat acgaatcagc tcaggaatat gcataaaacg
     8461 gttttcaaaa atcgtttctg taatacggct tgtgccttct gcaactgtat ttaataaggt
     8521 aaattgagct tgcatatcag ttgggaaacc tgggtgtggc atagtgcgaa tgttcactgc
     8581 tttcgggcga cgacctagag aatcaagcgt gatagtattt tccgtcacat caacctgcat
     8641 tccagcttca cgtaattttt cgatcactgc atcaagagtg tctgctttgg tgttacggca
     8701 agtaattcga ccaccggaaa tagccgctgc cactaaaaat gtaccggttt caatacgatc
     8761 cggcactacg ctgtgttcgc aaccgcctaa atgctcaacc ccttcaatgg taatcatatc
     8821 ggtacctgca ccagaaattt tagctcccat cgcatttaag aaatcggcag tatctacaat
     8881 ttcaggctca cgagcagcat tttcaataac agtagtacct tttgctagag tacctgccat
     8941 catcaccgat aaagttgctc ctacgctcac tttatccata tagattcttg caccgtttaa
     9001 acgaccgttt gaagttgctt tgacatagcc ttcatcaagc tcgattttcg cccccatttt
     9061 ttcaagaccg gaaatgtgca tatctaccgg tcttgccccg atagtacaac cgcccggtaa
     9121 agaaacttgc ccaagttgga accgggcaac taatggagct aacgcccaaa ttgaagcacg
     9181 cattgttttc actaattcgt aaggtgcaac gtaattattg atcttactcg catcaatatg
     9241 taccacgcct ttatcgctac ctttttcaac cgttacccct aattggcgta agattttaaa
     9301 agtggtgtcc acatctttta aatcaggcac attttttaac gtaactgttt tttcagccaa
     9361 aatagcggca aataaaatag ggagtgcggc atttttcgca cctgaaatat cgacagtacc
     9421 atttaaagaa aatggaccat acacacgaaa tttttccatt tgggagatcc taaaaaataa
     9481 taatttgtag gggcgaaaaa tttttcgccc aattttccaa cgtttacaaa agagtttggg
     9541 cgaatagtga ttcgccccta catttcatct atccaaccat atttagcaaa cgctcagttt
     9601 tccatttttc cacgctgaat actttaatgg ttaaagcgtg aatcgcatta gtagtgaaat
     9661 actcagctaa aggggcataa acagcttgct gttgttttac ttttgaaaga gaagcaatgc
     9721 tgtcacttac tacaataacg ccaaagtggg cattctcgcc ttgagcgtgg acttctgttg
     9781 catcagataa tgcttgtttt aaaatttctt caatttgtga tggattcatt ctgacttcct
     9841 aaaatatgat tggtaactca ctcaaataat aaattgctca aaccaaccgt ctaaatcgta
     9901 taatgcagcc aaagttctga cagaatctgg cgtattaatc aaactgtttg gtatgatttt
     9961 atggtaatga ttcagtaatt cagcaagtaa ggtaaaaccg gcagaatcaa tccgagtgat
    10021 ttcttttaaa tcccaatata ggctttgttt ccctgttgga gataaaaaag aagcacgttg
    10081 cttccataaa gggagcaacg tgttacgagt taattcgcct gatagtttca caaaaagact
    10141 ttcgttattt tgctgaatgt cccattgtaa tgttttttga ggcataacta aactacttat
    10201 tttaaagtga taggctgttt tgcagattgt gccacttgtg caattaaggc atcaatccct
    10261 ttttgacgaa tcacacccgc ccattcgttt tgcttggttg caaccatact tactccttca
    10321 gcggccatat cgtatgcttg ccattcacct gttttgctgt ttttacgcca tttaaaatct
    10381 aatttgatcg gctgtgcagc acctttacct gacacgttta cacgaatgct tacgatagat
    10441 ttaccatcca ccgatttcgg gctttcaatt tgcacacttt gatcttgata ctgggttaac
    10501 acctgagcat aagactgctc aacaaattga ccaaaagcat taaagaatgc ctctttttgt
    10561 gcatcagtcg cagccgataa gtttttccct aacactaatt ggcctgcata tttcacgtga
    10621 acgtgtggca ttaaatcgtt acgcacaatg gtacgcaaat attcagggtt tgatttaatt
    10681 ttcgcttgat ttgctttaat atcgccaaat aatttatctg cggtttgttg cattaataca
    10741 taagggctag tttcagcaaa tgcggtggtt gaaaataatg cagaaactgc cactaagcct
    10801 gttacgataa tttttttaat gttttttaac attattgatg ctctccaaaa ctctaaatta
    10861 gaggttgttg tacttaatta ctctgctttt ggttcagcag aatcacttgc tttttcatct
    10921 tcagttttat ctgacttttt atcaccatat aagaactgac cgattaaatc ttctaacacc
    10981 attgcagaat tggtatctac aaaagtatca ccttctttca tcattgcagt ttcaccttcg
    11041 attacgaagc caacatttaa cgcaacgtat tgctcgccta ataagcctga ggttttaatt
    11101 gagagcgagc tggtatcggg aatttgatta aaactttcat ttaccgctaa tgccactttc
    11161 ggggtgtagg ttttgttatc aagtgaaata tcagccactc ggccaactac cacaccgcca
    11221 actttaatag gcgcacgaac ctttagtcca ccaatattat caaaagttgc atacagggtg
    11281 taagttttct catttgagaa gccctgcaca tttgctactc ttaagcctaa aaagacaaga
    11341 gctgcaagcc caagtagtac aaataagcct acccaaaatt catatttaat tgattgacgc
    11401 attgtctgtt cctttcaaaa aatcaaccgc cgaacattat cgcagttaaa ataaaatcca
    11461 atcctaaaat caccagtgaa gcatttacca ccgttcttgt ggtcgcttgg ctgattcctt
    11521 ctgaagtcgg tacgcaatcg tagccgttaa ataaggcaat ccagaccacc gcaaaggcaa
    11581 aaatcacact tttaataaag ccgttaatta aatcgctggt atttaccgag ttttgcatta
    11641 ccgaccaaaa actgccacca tcaacgcctt tccaatctac cccgactaat gagccgcccc
    11701 aaattccgat agcggtaaaa atagcagcta acaccggcat tgaaatcacg cctgcccaaa
    11761 agcgaggagc gatgatacgt ctaagcggat caaccgccat catttcaaga ctggaaagtt
    11821 gctctgtggc tttcatcagc ccgatttctg cggtcaatgc cgaaccggct cgccctgcaa
    11881 ataataatgc agtaactaca ggaccaagtt ctcgtaaaag cgagagtgaa accaaagttc
    11941 ccaagctact ttcggcggca aaatcgacca ataccacata gccttgtaag cctaacacca
    12001 ttccgataaa taagcccgac agcataataa ttaagagcga ttgcactcct aacacataaa
    12061 gctgtttaat cagtaacggg gtatgttttc taaattcagg tttaccgatt aatgctcccc
    12121 ataacataaa agcggaacgc cctaatgtac ggataaaatt aatcaccacc gccccgatag
    12181 agctaataaa attaaccatt aaatagctcc tccgtataat cttttgctgg ataatggaac
    12241 cgcaccggac catcagcttt accggctaag aattgtacca cttgcggatc ttcgcttgcc
    12301 tgtaaaattt ccggtgtacc ttcagcaatc actcgtttat ctgccacaat ataagcataa
    12361 tcggcaatac ttaatacttc tttcacatcg tgagacacca caatggaggt caaattcaat
    12421 gcctgattta actctttaat cagctcgaca atcacaccca tactaatcgg atcttgcccg
    12481 gtaaacggct catcatacat aatcagatcc ggatctaacg caatcgctcg agcaagggcg
    12541 gcacgtcttg ccataccgcc ggaaagttcg gacggcatta aatttgccgc acctcgcaac
    12601 ccaaccgcct cgagcttcaa taacaccaat ttgcgaatta gctcttcggg taaacgggta
    12661 tgctcccgaa tcgggaaagc cacattatcg aaggtagaaa tatcggtaaa taacgccccc
    12721 gattgaaaca acatccccat tcgttggcga atttcataca actctttgtt attggctttg
    12781 caaatatctc tgccatcaaa taaaatttcg cccgattcag gtaaaatctg cccaccgatt
    12841 agcctcaaca gggtggtttt accaatccca gaaggcccca taatggcagt cactttacct
    12901 ttctgcactt gcagattcag gttatcgtaa atcactcgct cccctcgctt gaaggtcaag
    12961 ttttttactt caaccaaatt ttccgttttt gtcatcaaat aggactcaaa ttaataaaag
    13021 tgatatttat ggtctatcaa atttgccaga atgtcaaaaa acttttaata atctgacaaa
    13081 aatctgcctt tacaagcggt cagatttgct aaattttttg caaaccggct gaactgaaaa
    13141 agaaaggtct tgtcttagcc aatacgagcg ttttcactcg tagattataa aaacatagga
    13201 tatgaggaac attcacaata tgaacaaaac aatgaaaaaa tcatttttaa ctgcattcat
    13261 tttaggctca accattgccg caatgccggc gtatgcagaa gcaacattac ccacagccgt
    13321 aaatgggcaa gctgtgccaa gccttgcacc aatgctggaa aaagttcgcc cggcggtggt
    13381 gagtattgca gtagaaggta aaaccaaagg cgatagccgc cgcagtcgtg aaattccgga
    13441 agaatttgaa tttttcttcg gtcctcacgc cgatttattc ggcaaccgct catcagctcc
    13501 acgcaatttc cgtggcgttg gatcaggtgc agtcatcaat gccgaaaaag gttatgtgat
    13561 taccaataac cacgtgatcg acaatgccga taaaattacc gtaaaacttg aagacggacg
    13621 tgaatttaaa gctaaattag ttggtgctga tcccctttca gatgtggcgt taattcaagt
    13681 tgaagatcca aaaaacttaa ctgaaattaa attcgccgat tccgataaat tacaagtggg
    13741 cgattttaca gttgcaatcg gtaacccgtt tggcttagga caaactgtta cttcaggcat
    13801 catctcggca cttggtcgtt caaccggtca atccgatgaa ggctatgaaa actatattca
    13861 aaccgatgcg gcagttaacc aaggtaactc tggcggcccg ttaattaact taaacggcga
    13921 attaatcgga attaacaccg ctattatttc tccaagtggt ggcaatgccg gtatcgcctt
    13981 tgcgattcca agtaatatgg caaacagctt ggtgactcaa attattgagt ttggtgaagt
    14041 aaaacgtgga atgttaggca ttaaaggcgg tgaattgaat gctgaccttg ctaaagagtt
    14101 caatatttcc acccaacaag gggcatttgt aagcgaagtc ttaccggatt ctgctgctgc
    14161 taaagccggc tttaaagcag gtgatgtgat tactgaaatc aacggtcaaa aaatccgtag
    14221 tttcagcgaa ttacgagcaa aagtagctac ttcaggtgta ggtaaagaga ttgaacttac
    14281 ttacctgcgt gacggcaaag aagccaaagc aaaagtgacc ttacaatcgg attctgaagc
    14341 caaagttact gcttcaaacc tcattccggc attaaaaggg gcagatttta acaactacaa
    14401 tgccaaaggc attaaagggg ttgaaatttc taacgtagaa aaaggctcga ttgctgaaat
    14461 gcgaagcctc aaaaaaggcg atattatcat cggcgtgaac cgccactcgg tagaaaacat
    14521 tgccgattta cgcaaaatat tagaaaccaa gccatctgtg gttgcactca atattgtgcg
    14581 tgacggtgca aatttctatg tgattttgca ataaaccttt tgatccactc aaacaaaagc
    14641 cgatgacaaa aatcatcggc ttttgttatt gctgggaatt taacatctgt cgtgccattt
    14701 ccatactttg gataatcgct ctgcggttga tagaatcatt attgctatct aacactttac
    14761 gccaattatc gagagcttgt tgaaaattgt tatttaaaaa gctgtcggag gctagcagga
    14821 gtaaactggc attttcattt ttatccaact gtagggcttg ctcgataatg gcttgaattt
    14881 caacggtcat tttctgcccg ttatcgtaat aacgagcggt ggcaatcgcc cccaaaatag
    14941 ccgctcgttt tccgagtagc ttctcggcat tatcgtagca aaccagtgcc gaatcaaaat
    15001 cattgcttaa cgcataagcc tgccctagtt cgtaccataa atcaccgtta ttcgggtttt
    15061 ctcgaagctg gttttgcaga ctcaaaatat agcgttcatt tttcgatgtg ccgtgtgcat
    15121 cgctcatctg ttgttgaaaa tcttgatgtt gttgcaaacc tgattgcacc acttgataac
    15181 gtccggaaag cccatagtaa gtcattgcta acaacaaaat cgccacgcaa ctcaggcttg
    15241 cgattttagc aagcggtcga ttttgagcat tattttgcaa aacgctctgt tcaaattgcg
    15301 ttcgttcaaa ttggtaacgt tgctctgcct cacgctcaaa ctcttgtctg acgtcatctg
    15361 caaaatgttg ggcaaattta accgcttgtt ggtagttttc ttggcttaat tgctcacgcg
    15421 ttttcatttt tgttgccttt atttttgcga gttcgccaca aaatagctag aaataacagg
    15481 ctaaacaagc caaccggcaa gccccataat acccatgtct gtggcgtgaa tggtggatcg
    15541 taattcacaa aactgccgaa acgctcggtc ataatgcgga taatttcctc attacttttc
    15601 ccttgattca ccatttcata cacttcaatt cgcatattgt aagccgccgt cgcattggat
    15661 tcgaccaaat tttggttctg acattgcaaa catcgcaacg aacgagccag tgaaatcgcc
    15721 cgtacccgat ccgcctcatt ttgaaattga aaggtgtcca ccatttcagc ttgaaccgtg
    15781 ccgacaaata gcaacaagcc aaatacaagc ggtaatattt tgcggatttt ttgcaaaaag
    15841 ccgatggaaa ttatgctatt tctcatttct gagagcctct aatttgggta ggaaatcctg
    15901 tgcaaaatca gggttgtaac ccttttgttg gtaacgcact acaccgtgtt tatcaatcaa
    15961 ataactggaa ggtgcagaag agactttcag ggtttggatc aaaaagcctt tttcgtaatc
    16021 atcaataatt aaactaaacg gatttcccca gtttttcaat gcgttgaggg catcatttgg
    16081 gcggtcgcta taagttaagc cgacaatcgg cacgcctttt tgttttagtt ccaacaaaat
    16141 cgggaactct ttaatgcacc aagtacacca gctcacccac acattgagaa tataaggctc
    16201 tttcggcaag ctgttgttat ttaaatgcgc gttactatca agtaagttct tgcctacaaa
    16261 ctctggaaac ggcttgccct gccaatcttc agtgggagca agggcatctt tattcattaa
    16321 cggcacagtc aaaaagccaa caataactac aagtaacagg agcggaataa gtaacaggat
    16381 ttttttcatt ttttgttttc tctacgataa ccgaataatg ccaacagggc ggccattacc
    16441 atcatcatac cacctaacca taaggcttgc acataaggct tatagtgcaa acggaaggca
    16501 tattctaaat tgccgaactt atcccccatc acaatataaa tatcgtctaa attgtggtgg
    16561 aaaagcccta cttctgccat tgtcatcgtt cttacatcat aatagcgtct ttccggtgtg
    16621 acggttgcca gcaactgttc atctcggctg atagaaaaaa cggcttgctc ggcggtgtag
    16681 ttcggaccga tgagatcgtg ataatcttca tatttaaagg tataaccggc aagttccgct
    16741 gcttgattcg gctttaaccg cacgccgatt tcatcgccgt aataactgtt catcattgcc
    16801 ccaatcacgc aaaccgcaaa gccgatatgg gctaaccgca tcgcaagcgg tcgaatttgc
    16861 cacatttttt gcgaataggg caaatgagtg agaataatcc agatcgcaag gctgataaat
    16921 atggtgggta acggctgcaa agcaaaatgc tctctttgcg agatggaggc ataaatcaac
    16981 cctaacgcta aaccgactgc aatcggcagc aaccaaagtt ttaccaatat ctgcttattt
    17041 gaaatctgtt tccagcccag caccaccgca aagcccatta ctatcattaa cagtaacgct
    17101 agtggcgtga atacgctatt gaaatagggg gcccccactg aaatcgatcc ccaattcatc
    17161 actgtgaaga tcatcgggta gaaagtcccc agcaatacca cagaagcagc cacactaaat
    17221 aagccgttaa tcaataaaaa tgccgtttct ttagaaagta agttgaaacg cactttgcct
    17281 tgccagagat tcgctcggaa tgcaaacaga gcaagggcaa tgaaacttaa gccgaagaat
    17341 aagatcagca gtgccattcc tctgtcggga tcgaccgcaa aggcatgaac cgaggtcagt
    17401 acacccgaac gaacaataaa cgtgcctaat aggcttaaag caaaggcgaa aatggcaagt
    17461 agaatcgtcc aataatagaa aatgccacgc tgttggctca caattaaact atgcaccaat
    17521 gcggtgccaa gtagccaagg cattagggag gcattttcca ccggatccca aaaccaccag
    17581 ccaccccagc cgagttcgta atatgcccac cacgccccta aaataatgcc ggcggtgaga
    17641 aatccccacg aaatcatcgt ccacggacga agccaacgca taatcgcagc gtccattccg
    17701 cctgaaacga gggcggcgac aatcattgca aagctcaccg caaagccgac atagcccaag
    17761 tagagcaaag gcgggtgaaa gatgagccca atatcttgca acattgggtt gagatctcgc
    17821 ccttcaggtg gtggtggaaa gccacgttca aatgggctgg aaaccaatag aatgaaaagt
    17881 agaaaaccta gtgcaattag ccctaacatc gctaaggttc ggttggcaaa caagcggtca
    17941 attttttgcg aaaatttgca aaataccgca gaccaaatca caagagcggt gagccaaaac
    18001 agcattgagc cttcgtgtcc gccccaagtg gcggcaaatt taaaaaaatc ggggagctgg
    18061 ctgttggaat gagcggcaac gtagataacc gaaaaatcat cggttagaaa agcataagct
    18121 aaggtagaaa aggaaaatgt ggtaaaagca gcttgcaaat aagtgaaaag cggagccaat
    18181 gccagccaat gatattgctt gcgaacttcg cctagaagtg caaaaccaac ttgaaaaatg
    18241 gcactaattg cagccaataa aagtgaaaaa tagccgagtt ccggtagcat aaaaaatcca
    18301 aaaaatgacc gcttgtgaat gtaaaaaaag ccctctccac ttgtgggaga gggacagatt
    18361 tttcttcgtt cagaagaaaa atcagggaga ggggaattaa ataattttgc taaaaataac
    18421 aatactccct ctctctgaaa aatatttctg aacgaaatat ttttcggtct caatactcgc
    18481 tacgctcgct ccttcggagc cgttggcaaa gccaacgttc aaatgtaaac atttgtccca
    18541 caaggggaga gagtatatcc taacttgcaa ccgttagttg ccctgcataa aggataaagt
    18601 aacgcaagca gagtacaccg attaagtcga aaacggaaat taagataata aatttcacgt
    18661 tatgtttcaa gcggtggcta ccaaaaatat tggcaacaag cggaatcgca ataccgatta
    18721 acattacgcc tatccagaac acattccccc agaagccgtt aagtgcatgg gttaaagcga
    18781 gcgatttatc tgctccaccg aagtgtaagc ccacaaagaa cgctacaatt aagcctaatt
    18841 cggttaccat aatcggcact tcaaatttgt gcataaagtg gacttcgtgg ctttcaccgg
    18901 ataacttgcc tgcgagtaaa atcactagga aagttgctgc aatacctgac gatgcccctg
    18961 atgccaagaa caatgccggt aacacagggt tattcagcat tggataactc actaacgccg
    19021 agagtaagaa accggtgtaa gcaccaagta cagcagccaa tacgaataag ataaattcaa
    19081 ttggttttaa cagcttcgct tcggcaaaat cgatcaaacc agagaccaca ggtagatacc
    19141 gaacaatcca atctttaaac attatggcga tccaaaccac caatactgcc atataaagtt
    19201 ggaataacat tacccccatc gacattactg aggtaaagtt atagttgaac attaatttcc
    19261 agaatgtcca aggtttggtt aagtggaaaa tcagtaacag taagccgata atggttggta
    19321 atgtgccaag aatagccgca ctacgaataa tccagttttg gcttggtttt tccattttga
    19381 caccgctatt acggtaagca atcgctaact gaaccgcacc tgatgaaata ccaagtagga
    19441 ataagtaaat agcgatagtg ccatcccaaa caaggtttgg ggtttggaaa ggtacatatt
    19501 cattcattat ctatgttctc ctttaccaaa tggaatgtga tataaattcg gctccgtgcc
    19561 taatgccgtt ttggtgcgat aaaccggatt atttttcact ttatggaaaa tatcgctact
    19621 tggatcattc atatcaccaa aggttaaagc tttagtcgga caagcctcta cacaagcagg
    19681 ctgtttgcct tctgcaagat tggtatctcg gcaaaagtta catttatccg ccgatttttt
    19741 ctcagggtga ataaaacgta cacgatacgg gcaaaccgca atacagtatt ggcaaccgac
    19801 acacaaatct gagtgtacat caataatccc ggtttcagga tcgataaatg aagcaccggt
    19861 cgggcaaaca ctcacacaag gtgcattggt acagtgttgg caagattggc ggaaaaactc
    19921 atattgtacg ttcggaaact caccgaaagg ctcactacgg ataatttcta aacgagaaac
    19981 cccttccggc actttgttgg tggtgcgaca agcgtccata caagccgtac agccgataca
    20041 ggcagtttca tcatgaacca tcgcatagcg gattttcttt tgttctttct cagtagcaag
    20101 agttatggag gtggcaagcc ctgtacttgc cacaactgcg atagcacctg cccctgagac
    20161 gaaatctcta cgggtgcaag tcattatttt gttccttttg cttctgtggc tttcatttca
    20221 ggatttttaa attcgcctga atgaattttg gtatgacaat ccgtacaaag tttaatgcga
    20281 tctttttcag gaatgtcttt catcggatct ttttccgggt gaatttcatg acagttggta
    20341 caagcaattt tagttgcgtg cgtgtcgtga gcccagaatt tttcacgcaa tttctctgcc
    20401 gtatggcaag caaaacagac ttgattttgc tcatttaccg aacgttcaag tgatgggtta
    20461 cttgctttac cgtgtgggtt aaaacgcatt acgtcttttg cccctttgcg gtggctttca
    20521 gaaatattac cgtggcaact tatacaagtg agtggctctc cattattcgg gcttttcaca
    20581 tctttttgga aatgtttgcc tgcgtgatgg aaaggcttac ctgttgcgtt tgccgattcg
    20641 tgacattgag tacaatattt atttggatca cggcgtgcat cttgagctac ttttgcatca
    20701 tcagccgttt ctgattgcca aagaggtttt ggctgctcag gcattaacgc attcgcactg
    20761 gaaattgcaa aaaaacctgc aaatacgacc gcttgtatga gggcgactgc tcgtcctgct
    20821 tttgagatta attttttcat agttcacctc aagctacatt attttgcttc tgcttttggt
    20881 gctgctaccg gtttgtctgc ttcttctgcg ggtaataaac ctttagcacg agcttctttt
    20941 tcccattgag gaaccacagt ttttaagaac tcatcttttg ctgcttgctc tttaggaata
    21001 tctaaaccaa tagcaagttg tgctttctct ttagttgaga tgtccggaat cgccactggc
    21061 gttgttacac cgtgtttcgc taacactaca cctaatttag cacgggcatc tgctgcacgg
    21121 tcgatacctg ttgcgatggt acgtaacatt acatcaggtg cgtggaagtg gttaccgtga
    21181 cctgccgcag agtaatccca acgccattga gcgtgacgaa ttgccattaa gatctctttc
    21241 atctcttctt gagttgctcc agcttcccaa gcagctttcg cttcaaagtg agctttcact
    21301 aattgatctt ctaagcgaat cattgcctct tttacttcgt gtttatactc ttttacacgt
    21361 ttttccaatg tttctttgct ttgttcatga caagttttac aagtcgcttc aaattggtca
    21421 aacggattac cgattttgtg gtcagtataa actttgccgt ctttgtcttt cacttttggc
    21481 atatggcaat caatacaggt tacaccattt ttcccatgtg taccttgtga ccaaacttca
    21541 aaatctgggt gctgcgtttt tagcatcgga gctttcgata aagcatgagt ccagtctgta
    21601 aaattgattt catcgtagta tttttcaatg ctatctacat ctacaccttt atcccaaggg
    21661 aaagttacat ctgttttatt tttgaaatag tactccacat ggcagttagc gcacacagca
    21721 gggcgtttac catgtttatc taaatcctca aacttccaac caaccgtatt caatgcacgt
    21781 aatacgtgag gacgtgcaac acgtagtgca ggtttacctt gtttaaactc ttctgatgtc
    21841 gtgtcatggc agtctgcaca acctattgag tttacaattt cagcaccata tttcgcccat
    21901 ttaggatcaa aatatcctcg ctcacctttc tcctcaatta agcgtggaac atcagggcct
    21961 ttacatgtcc aacaagccat aggttgtgga ccatcatttt catctttagg cgcgccggtg
    22021 cgcaaaatat cacgcacatc ggtaactgca taaaagtgac ctcgtggttt attataatct
    22081 ttcgcaaaag catagcctgc ccacaaaata acataacgag ggtcagcctc taacgcactt
    22141 cctcgatctg tggattttgc agttgacttc caagaatcgt attgtagcgg atatttttct
    22201 gcaaataggt ggtttgcaga ctcaattttc acgcctaatt tttcatgctt aactgcttta
    22261 tctgttaatg attcagtttt cgcctcttca gctaaagcag tttgtaaaca ccccaatatt
    22321 gaaattgttg ccacagctag gctttttatt aaaaatttca ttttggctct cccaatcagg
    22381 taaaaataat tagagaaaaa taagaatttt tcctattaaa attaataaga taatccctga
    22441 tattcagttg cgagaatatg aaatttaaac caagccgact atatcaaaat gaagatttat
    22501 tgaattaaat caataaaatt tgccaaaata cctcttaagt agtaattcct ttctctacct
    22561 aaataaaaac gacttttatt tgtccaaata aatgatggaa tcctatttat ttttact
//
LOCUS       DANMCL010000042        22510 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.042, whole genome shotgun sequence.
ACCESSION   DANMCL010000042 DANMCL010000000
VERSION     DANMCL010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22510
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.042"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(106..2295)
                     /gene="yccS"
                     /locus_tag="PXF40_001393"
     CDS             complement(106..2295)
                     /gene="yccS"
                     /locus_tag="PXF40_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HDL5802727.1"
                     /translation="MNKFLRYLQHSWLSENVIKTLPMFISLNIAAVSIWQLGISDFAM
                     PLMLGIIAGGLVDLDNSLIGRAKNLIISLVAFSLSSIGASVSLHLGWLFVPVAVVCTF
                     LLVMLGAIGQRYSTIAFGTLIVAVYNSLAYTPEVLWYHNVVMILLGTLLYGLVGILVY
                     LIFPNRTVQENLASAYLALSHYLLAKSAYFDPDDDDLAAKQLALAKANSEVMAAFDKT
                     RVALFYRLSRQHKQQRTQRMLRYYFTAQDILERASSSHYQYHELFQQLSNSDLMFRFQ
                     RVLELQAAACQKIAMSLRHREVYEHGVRGEKALQGLLNSLNYHQERGLKSAYRWRAIA
                     ENLGNIERQLAQIEQGSSSGEHIEPLSKNFTKSHRLIAENITGLSNISQAIKAHLTFE
                     SQLFRHAVRLSIVVLLCSAIVPILGFDSKGYWILLTAIFVCQPNYTATKTRLIQRVIG
                     TIFGVLVGGSFELFNVALSLEAQLGLIVLTGSLYTFFRLVHYGFSTFYITVLVMISLD
                     IAGVSLESGILMRMLDTLLGTAIAWLAVAFLWPDWKYLNLQRNLHNGLKASGQYLRHI
                     IAQLQFGYNEQLPYRIARRDVHNHLSALSNAITNMYSEPQKYANDLTFAPKLLGIAYT
                     LLGYISTLGAYRIASREINQQVDFSAMFFSHAREVANIIGQIASESRSFAKLSEKLTA
                     IDQDLTQFEQENQQKQNDLALVLIQQLRLIVQLLPQLNSILQLKSVR"
     gene            complement(2339..2797)
                     /locus_tag="PXF40_001394"
     CDS             complement(2339..2797)
                     /locus_tag="PXF40_001394"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HDL5802728.1"
                     /translation="MKTTVRTIAKQKQIALVAHDSCKQDLIRWTQTHQAQLASHKLYA
                     TGTTGHLLARETGLEITSLLSGPMGGDQQLGGLIAEKKIDLLVFFWDPMNAAPHDPDV
                     KALMRIATVWNIPVAINETTANFLLNADLFNQAISVNVPDYDGYLAERLG"
     gene            2923..4197
                     /gene="thrC"
                     /locus_tag="PXF40_001395"
     CDS             2923..4197
                     /gene="thrC"
                     /locus_tag="PXF40_001395"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HDL5802729.1"
                     /translation="MNLYNIKHPEEQVNFAQAVRQGLGKNQGLFFPEVLPKLDSIDEL
                     LDLPLVKRSQKILSALIGEELPQETLNAMVKNAFTFPAPLAKVNDDIYALELFHGPTL
                     AFKDFGGRFMAQALANVRGDGKITILTATSGDTGAAVAHAFYGLENINVVILYPKGKI
                     SPLQEKLFCTLGGNIRTVAIESDFDACQALVKQAFDDAELRQAIGLNSANSINISRLL
                     AQICYYFEAVAQLPKEKRDNVVVSVPSGNFGNLTAGLIAKTLGLPIKRFIASTNANDT
                     VPRYLQSGKWEPNATVATLSNAMDVSRPNNWPRVEELFKRNGWSLSELGSAALNDAET
                     EAALKAQYAEGYLCEPHGAIAYQSLKDQLQQGETGIFLCTAHPAKFKESVEHILAIEL
                     PLPEALDKHNKLPLLSDEMAADFATLRAYLLK"
     gene            complement(4276..5010)
                     /locus_tag="PXF40_001396"
     CDS             complement(4276..5010)
                     /locus_tag="PXF40_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HDL5802730.1"
                     /translation="MSFKDMTGQKVPSVTFRTRQNDAWVDVTTDELFNNKTVVVFSLP
                     GAFTPTCSSTHLPRYNELACEFKALGVDDIICMSVNDTFVMNAWKADQESENITVIPD
                     GNGEFTEGMGLLVDKNDLGFGKRSWRYSMLVKNGIVEKMFIEPQEPGDPFKVSDADTM
                     IKYLSPNWTAKESVSIITKPGCLFCAKAKALLKEQGYTFEEIVLGRDASTISVRAITG
                     KTSVPQVFIGGKYIGGSDELAAYFAK"
     gene            5125..6009
                     /gene="oxyR"
                     /locus_tag="PXF40_001397"
     CDS             5125..6009
                     /gene="oxyR"
                     /locus_tag="PXF40_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HDL5802731.1"
                     /translation="MNIRDLEYLIALAEHKHFRRAAESCNVSQPTLSGQIRKLEGELG
                     TILLERTSRKVLFTQAGLTLVEQAKVVLREVKILKEMASNQGKEMSGPLHVGVIPTLG
                     PYISPIIVPALKAEFADLELYIYELQTNQLLDQLESGQLDCGIISFVKESESFIEVPI
                     FNEEMYLVVPEQHEWAALKKFDMNLLKNRELLFLDSGHCLRTNTLDYCLSIGAKENPH
                     FKATNLETLRNMVAANVGLALIPKLAAKPIKGVHYIPLENPKPFRAVGMVYRPGSPLR
                     ARYERLAQAITKIMQSEA"
     gene            6012..6644
                     /gene="fabR"
                     /locus_tag="PXF40_001398"
     CDS             6012..6644
                     /gene="fabR"
                     /locus_tag="PXF40_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HDL5802732.1"
                     /translation="MANGMSVRAIQKEKTRRALVEAAFNQLSSEKNFSNLSLREVARE
                     AGVAPTSFYRHFKDMDELGLAMVDESGLLLRQLMRQARKRIANGGSVVVVSVETFFEL
                     IADRPNVFQLLLRESSGTSQAFRTAASREIQHFVAELADYIMSKDNHSNRELAYIQSE
                     GLVTLVFTAGSHALDMNNQEREKLKQRVIMQLRMLIRGSTYYANKQASST"
     gene            complement(6671..6970)
                     /locus_tag="PXF40_001399"
     CDS             complement(6671..6970)
                     /locus_tag="PXF40_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HDL5802733.1"
                     /translation="MKKADIQKMQDCYNQWVELLPELEKGIEQWKRASALLEPLSRFY
                     ASPEWRELHDSFDEQLDTKGNYSILSEDALWSALSEHHQLALEWLKLSTAYITKE"
     gene            complement(7059..10874)
                     /locus_tag="PXF40_001400"
     CDS             complement(7059..10874)
                     /locus_tag="PXF40_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HDL5802734.1"
                     /translation="MKGSGLATVGAPETGDNGQTIYTVDVAKAGAPTVTRGNVADAIN
                     NSEKTSSVVAGSKAVTVKAGKEDDKGNTEYTVDVATDKSIGRDNDGNMTVNTDNVTIV
                     KDPTTGEVKANTTTLNNSPEGKVTEPTGDDAKKLVTAGDIANAINNSGFNVTAGDGVD
                     GGETKGKKTQLIKPSETVTFDAGKNMTLTQADGKFTYTTKDNVAFNSIDMSNGKPDTT
                     GSITNLKSGVGGTFADKAAPTDAERKAIADNINNATGDTLNNAVNVGDVQAAMKAATT
                     KVEGDKGVTVTSKTNDDGSTTYTVEAKTDGTTIKVNDKGEITANTSELTNNPDGKVEE
                     PTEPNALVTAKTVADAINNAGFNIKANGDEKSLVKTGDTVQFLNGKNIEITRDGNNIT
                     VSTAKNVNFDSVQFGNEGPKITNNGGNINVGDKDGNAVKVTNVAAGDVNADSKDAVNG
                     SQLYTFAMASREEVKSTDKSVTVNTTKNADGANVFDLSVNTDDVTIVKDPTTGAIKAN
                     TTALNDANNDGRIDEPTADDAKKLVTAGDITNAINNSGFTLKTSAVEGGEKLSGGDEL
                     INPGKAVEMVAGKNLTVKQEADGKVIYATKDDVKFSSVTSNTVTVPTDEADPANNPIT
                     INKDGINAGNKAISNVASNLIPVTADDKVQPADNNPTNLADKLSNAATLGDVLNAGWN
                     LQGNGKAVDTVVHNDTVDFINGKGTTVTVENKDGKNTIKVDSPIEFVNQDPTDSSTPS
                     NTAKFTGEAPVQLGNVASSVRNEDGSTPEGKDRAEAIKNAEGDKLNNVVNLGDLQAAT
                     NAATTKVGGNRGVTITPSTNADGSTTYNVEAKTDGTTIKVDNEGNITANTSELGNNED
                     GTVKAPTQPNALLIAQTVADAVNNAGFNIKSAGNKAAGDQAATKLVKTGEEVVFEAGD
                     NLTVKRDGNQFTFATAKDVSFNSVQFSENGPKITNDGDNIKVGDKDGKPTKITNVADG
                     DISPVSTDVINGKQLNNYAKVNGNNIGTDEDGSINIVNGNGTTITSDKAGEVKVNVNI
                     TDLTVADNGKINVQDPNGTGSRFVNATTVANAVNNVSWNVDSKAVGTGAVEGDKAPAK
                     VKAGSTVSVNAGNNIKVTRKGSDVTVAVSDTPEFTSKTGDTLVNNNGVTINNGSAGKA
                     VSLTKDGLNNGGNRITNVKAGEADTDAVNVGQLKGAVNHLNNKIHRNNREARAGIAGS
                     NAAAALPQVYIPGKSMVAAAGGTFKGENALAVGYSRSSDNGKLILKLQGNANSRGDFG
                     GGVGVGYQW"
     gene            complement(10837..11322)
                     /locus_tag="PXF40_001401"
     CDS             complement(10837..11322)
                     /locus_tag="PXF40_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802735.1"
                     /translation="MDTGSITVDNTTGAVTTPAEEDKVATTKTVSEAIQKAGWNAKSG
                     GNKADGDQEAAELINPGEKVIFAAGDNLKVKRVGTIFTYETAKDVKFDSVTFGDNGPK
                     ITNKDGNVNIAGNDGNPTKITGVKAGEADTDAVNVSQLKQAAASQNRSERFRFSNCWC
                     T"
     gene            complement(11331..13490)
                     /locus_tag="PXF40_001402"
     CDS             complement(11331..13490)
                     /locus_tag="PXF40_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5802736.1"
                     /translation="MGARATSANAIALGTDTAATGNRATAFGAGALATGNRSTVMGWR
                     SAASGTRSFAMGSGAMGDKSVANATYSLALGSSANANATSTATRGTAIGYNATVSGVN
                     ATALGVSAVSSNQSTVAIGDSAKASAGFAIALGSGANVALNNSVALGSNSTVSNAVAV
                     PSATVNGITYSGFAANTTAAGNVVSVGSNTIKRQIQNVAAGQISATSTDAINSSQLYM
                     AMNATGNLANSTKNILGGNATVKPDGSVTYTNIGGTNKNTIEEALKAVKTEVVAGSNV
                     NITNATGANGQTIYTVNAYNTTANSSSPDYITVTGKAATAANTTNYEIGLTKKAIDDF
                     TKDTQATVVSNDGTVTVKSTERNANGTVIYDLSVNIPAQASQIQYFSVNSTVPENQAN
                     DGAKSRNSIAIGPNATATGGEQAAVALGTNSNANGNGALSLGVATVSKGIQATAVGHS
                     ANATANGTTALGRQTNATAGDATAVGSNANATAEKASAFGVAANASANASLAVGANSI
                     ASAQSAVAVGTRANATAQFATALGMGAQATLNSSVALGSESVVRAATPTENATVGGIT
                     YNGFAGVNKDTNYVVSVGSAGKERQIQNVAAGQISATSTDAINGSQLYMAMNATSNLA
                     NSTANNFGGGSVVNPDGSVTQPKYNVTNAAGTQYGNTATNVGDAITNLNNYVNQGFNI
                     KDNAGETKGTVTPNESVQFVNGKGTVSNVTQEADGVK"
     gene            complement(13719..13919)
                     /locus_tag="PXF40_001403"
     CDS             complement(13719..13919)
                     /locus_tag="PXF40_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR domain-containing protein"
                     /protein_id="HDL5802737.1"
                     /translation="MNQIFKVIWNQATQSWVAVSELQRAKGKTKSVSSASKATLALLA
                     GASAVLGANDAVAVVSYRFNNK"
     gene            14283..15437
                     /locus_tag="PXF40_001404"
     CDS             14283..15437
                     /locus_tag="PXF40_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HDL5802738.1"
                     /translation="MNQFFPLIFSLTLFSGVTLALEKAPRTMPTEGINKPLLGQILFF
                     DNMLSHNGSQNCSSCHNPDYAFIDNRTTPAKGVVSQGDTPTKFGKRNSPTMLYAKYSP
                     EFHFDEQSQEYIGGQFWDGRAKNLAEQAGMPPIDPNEMGMPNKLEVAKRLYNVPMYQR
                     FLGQFYGEKVWESYESVYAAMEDAIATFQQENKLLAPFDSKYDLFLKGEVQLTALEEK
                     GRALFFNKAQTNCSSCHQLQSAANHQEETFSNYHYYNVGVPGNPDLIAVNGFAPDFVD
                     LGLFENPNVKGDETQKGKFKTPTLRNVAVTALYMHNGVFKELKTVLLFLDSYNNPERK
                     INPETGTAWQQAEFEPTIAHQKLKAKPLSDEEIDALEAFLKTLTDERYRK"
     gene            complement(15485..16474)
                     /locus_tag="PXF40_001405"
     CDS             complement(15485..16474)
                     /locus_tag="PXF40_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5802739.1"
                     /translation="MNDLIIYNTEDGKSNVALLVVENEAWLTQNQLAELFDTSVQNIS
                     EHIKNILKDKELDENSVIKDYLITAQDGKNYQVKHYSLEMILAIGFRVRSPRAVQFRK
                     WANSTLRTYLEKGFLIDSERLKNPQGRLDYFDELLEQIREIRASELRFYQKVRELFKL
                     SSDYDKTDKNTQMFFAETQNKLIYAITKHTAAELICQRADATKMNMGLTSWKGKVVRK
                     GDIVIAKNYLDNNELDSLNRLVMIFLESAELRVKNNQDLTLGFWRRNVDMLIEFNGFS
                     VLGNGGTITHKQMESFVREQYEKFDIQRKCLKQKEADWEDLQALEKLESELTR"
     gene            complement(16634..17998)
                     /gene="mpl"
                     /locus_tag="PXF40_001406"
     CDS             complement(16634..17998)
                     /gene="mpl"
                     /locus_tag="PXF40_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HDL5802740.1"
                     /translation="MKKHIHILGICGTFMGGVAMIARELGYKVTGSDTNVYPPMSTFL
                     AAHGIEIIPNYDVAQLQPAPDLVVIGNAMSRGNPCVEYVLDNQLNYTSGPQWLHDHLL
                     KDKWVLAVSGTHGKTTTTGMLAWILDQNGIDTGFLIGGVAGNFGISARAGNSPFFVIE
                     ADEYDSAFFDKRSKFVHYTPKTLIINNMEFDHADIFDDLKAIQRQFHHLVRTMPQSGC
                     ILSAIADQNVQDTLKMGSYSQLQFIGEQNEWFAKPLNADCSQFEVFHLGVKQGEVHWS
                     IIGKHNMHNALMAIAAAHHAGVEVQGACEALGKFVNANRRLEVKGEVNGITVYDDFAH
                     HPTAIEATIDALRGKVGKNQRILAVLEPRSNTMKMGVHKDEIAPSLHDAEAVFVYQPD
                     IIAWSVSEITNVLSQPAYWSANIDDLVDLVVKEAKPTDHILVMSNGAFGGIHQKLLAK
                     LADK"
     gene            complement(18294..19049)
                     /locus_tag="PXF40_001407"
     CDS             complement(18294..19049)
                     /locus_tag="PXF40_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HDL5802741.1"
                     /translation="MKLKSFKPMFMLLSVAFLTACSSSINPETGVRDDPLEGFNRAMW
                     KVNYDYLDPYVLKPVAKGWKEYVPSPVKTGLINVANNLDEPVSFVNRLIEGEGKKAMV
                     HFNRFWINTVFGLGGLIDWASLDEGLRLNNGQRGLGESLGAHGVPSGSYIMMPAYGAT
                     TPRQGIGSAVETGYSVLTYVGSPWSIAKFVVQGVDTRSKLLEQDALLEQAQDPYVTFR
                     EAYFQNLEFKVKDGNVEQSQQEQLSEEELKNID"
     gene            19204..19521
                     /gene="metJ"
                     /locus_tag="PXF40_001408"
     CDS             19204..19521
                     /gene="metJ"
                     /locus_tag="PXF40_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HDL5802742.1"
                     /translation="MADWNGEYISPYAEHGKKSEQVKKVTVSIPIKVLEILTNERTRR
                     QIKNLRHATNSELLCEAFLHAFTGQPLPNDEDLMKDRADEIPEAAKQKMCELGIDPDE
                     WQY"
     gene            19569..19799
                     /locus_tag="PXF40_001409"
     CDS             19569..19799
                     /locus_tag="PXF40_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF997 family protein"
                     /protein_id="HDL5802743.1"
                     /translation="MYQQLTTEARWAVLLTLIYLLGWVGFAYFSPQGRGIFGFPIWFE
                     LSCIFLPVLFSLVATIVVKKVYKNIDLEVNNE"
     gene            19792..21216
                     /gene="panF"
                     /locus_tag="PXF40_001410"
     CDS             19792..21216
                     /gene="panF"
                     /locus_tag="PXF40_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HDL5802744.1"
                     /translation="MNSEMILPLIAYLIFVFGVAFYAYRKRQGGSFISEYYIGGRSMS
                     GFVLAMTTAATYVGASSFIGGPGAAYKYGLGWVLLAMIQVPAVLLSLGALGKKFALLA
                     RKHNSVTINDMLLARYQNKFVVWIAGLALLLSFFAMMTVQFIGAGRLLETTLGIPYQT
                     AVMIFAITVGLYTFIGGFRAVVLTDTIQGLVMIVGTSILLAGVIYATGGVENAMHTLE
                     AINPQLTTPYGIDERPLDFTFMTSFWVLVCFGLIGLPHIAVRSMACKNSQALHRAMII
                     GTVVIAILMFGMHLSGVLGRAVVPDLKVPDQVIPTLMVQVLPPVVAGIFLAAPMAAIM
                     SSIDSMLIQSSSTLIKDLYLAIKPNAINNEKKIKLFSTITTLTFTVLLVFAALTPPEM
                     LIWLNLLSLGGLEATFLWVIVLGLYWEKANATGAIYSMLAGLSCYVLMTTFKIAIFSF
                     HAIVPSLLIGLIAFLIGNRFAPKV"
     gene            complement(21293..22483)
                     /gene="nhaA"
                     /locus_tag="PXF40_001411"
     CDS             complement(21293..22483)
                     /gene="nhaA"
                     /locus_tag="PXF40_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HDL5802745.1"
                     /translation="MEKLKEFLKSEASGGVLLLVFAFAAIVCANTSLSDFYFEFLQTI
                     VSVQFGEFALNKPLLLWVNDGLMAVFFTLVGLEVKKELFEGSLSSYKKAIFPAIAAVG
                     GMIVPAIIYWAINQNHPEYHNGWAIPMATDIAFAVGIVALLGTRVPLALKAFLLALAI
                     IDDLGAIVVIAIFYSQEISVQALTIAAIAIIGLVLLNRFKVTSLCAYLVVGLVLWTSV
                     LKSGVHATLAGVIIGFCVPLKGKHGERPAEELEHILAPWCAYMILPIFAFANAGVYLL
                     EMGMEQLSSPLPLGIALGLIIGKTLGVFGFSYLAVLFRLASLPQGVNFKQIFAIAVLC
                     GIGFTMSMFLASLAFDVSEAGESITALARLGILLGSAVSAILGYTLLRMATKQNNPEN
                     NATY"
BASE COUNT         6422 a         5087 c         4248 g         6753 t
ORIGIN      
        1 atgtccttca aaaaaaacaa aacatcaaca aaaaattaac aaaaccataa tatttttatt
       61 gattttgtga agcatgtcac attttatgat ttaattatag gctcactacc ttacactctt
      121 gagctgtaat atactattta actgcggtaa taactgcacg atcagtctga gttgttgtat
      181 caacactaag gcgaggtcat tttgcttttg ctgattttct tgctcaaatt gggtgaggtc
      241 ttggtcgata gcggtcaatt tttccgataa ttttgcaaat gaacggctct ctgaggcaat
      301 ttgcccgatg atgtttgcca cctctctggc gtgtgagaag aacattgcgg aaaaatccac
      361 ttgttgatta atctctcggc tagcaatacg gtaagcccct aaggtggaaa tataacccag
      421 caaggtgtaa gcaataccta acaattttgg ggcgaaggtt aaatcgttcg catatttttg
      481 tggttcgctg tacatattgg taatcgcatt actcagtgcc gataaatggt tatgcacatc
      541 acggcgggca atacggtaag gcagttgctc gttataacca aactgcaact gggcgataat
      601 atggcgtaaa tattgcccac tggctttcaa gccgttatgt aagttacgtt gtaaatttaa
      661 atacttccaa tccggccata agaatgccac tgccagccac gcaatcgctg tacctagtaa
      721 ggtatcaagc attcgcatta agatgccgct ttcaaggctc acgcctgcaa tatcaaggct
      781 tatcattacc aacacagtga tataaaaggt tgaaaagcca taatgtacca agcggaaaaa
      841 ggtataaagc gaaccggtca gtacgattag cccaagctgg gcttcgaggc tgagcgccac
      901 gttaaacagt tcaaaagagc caccaaccag cacgccgaaa attgtgccga tcacacgctg
      961 aatcagtcgg gtcttagtag cagtgtaatt cggttggcag acaaaaatgg ctgtgagtaa
     1021 aatccagtag cctttgctat caaagcctaa aatcggcaca atcgcactgc acaacagcac
     1081 cactatcgac aaccgaacgg cgtgtcgaaa cagttgggat tcaaaggtta aatgggcttt
     1141 aattgcttgg ctgatattgc ttaagccggt aatattttcg gcgatcaagc ggtgagattt
     1201 tgtgaaattt ttacttaacg gttcaatatg ctcaccactg cttgagcctt gttcaatctg
     1261 ggctagttgc cgctcaatat tgcctaaatt ttctgcaata gcacgccagc gataagcact
     1321 tttcaagccc cgttcttgat gataattcaa tgaattaagc aagccctgca aggctttttc
     1381 gccacgaacg ccgtgttcat atacttctct atggcgtaac gacattgcaa ttttttgaca
     1441 cgccgcagcc tgtaattcca gcacccgttg aaagcggaac attaaatcac tgttacttaa
     1501 ttgttggaac agttcgtgat attgataatg gctggaactt gcccgctcta aaatatcttg
     1561 agcggtgaaa tagtaacgca acattcgctg tgtccgttgc tgcttgtgct ggcggcttag
     1621 gcggtagaat agggcaactc tggttttatc aaaggcagcc atcacctcac tattggcttt
     1681 cgccaaggct agttgtttgg cagctaaatc gtcatcatca gggtcaaaat aggcagattt
     1741 cgccagtaaa taatggctca acgcaaggta ggcggacgct aaattctcct gcacggttcg
     1801 attcgggaaa atcaggtaca ccaaaatacc gaccaaacca tagagtaagg tgccaagtaa
     1861 gatcatcacc acattgtgat accacaatac ttcgggcgta taagccaggc tgttataaac
     1921 cgccacaatc agcgtgccaa aagcaatggt actatagcgt tgcccgattg cccctaacat
     1981 taccagcaaa aaggtgcaaa ccaccgccac cggcacaaac agccagccca aatggagcga
     2041 cacactcgcc ccaatcgagg aaagcgagaa cgccactagg ctgataatca gatttttcgc
     2101 tcgtccgatt aggctgttgt ctaaatccac caaaccgccg gcgataatgc ctaacatcaa
     2161 cggcatcgca aaatcagaaa taccgagctg ccaaatgctg accgccgcaa tgtttagcga
     2221 aataaacatc ggcagggttt taattacatt ttccgaaagc caactgtgtt gtagatatct
     2281 taaaaattta ttcatatttg ctcatttcgg gcaggcacag gacctgcccc tacctacact
     2341 accccaaacg ttctgccaaa tagccatcat aatccggcac attcacgctg attgcttgat
     2401 tgaacaaatc cgcatttaac agaaaattag cggtggtttc gttaatcgcc accggaatat
     2461 tccaaacggt cgcaatccgc atcagggctt tcacatcagg atcgtgcgga gcggcattca
     2521 tcggatccca aaagaacacc agcagatcaa ttttcttttc tgcgatcagc ccgcctaatt
     2581 gctgatcgcc ccccatcggg ccgcttaaca atgaagtaat ttcaagccct gtttctctgg
     2641 cgagcaaatg cccggtagtg ccggtggcat atagcttatg cgaggcaagt tgggcttgat
     2701 gagtttgtgt ccaacgaatt aaatcttgtt tacagctatc gtgagccact aaggcaatct
     2761 gtttttgttt tgcgatggtt ctgacggtgg ttttcatttt tagctccttt gcaaaatttt
     2821 tcacaaatca taccgcttat ttttcgcttt tgcattgact aatcacggct tatggctaaa
     2881 atcaggtaaa aattcgcatt ttaaaacaaa ggattaaccg caatgaactt atacaacatc
     2941 aaacaccctg aagaacaagt caatttcgcc caagcggtac gccaaggctt aggcaaaaat
     3001 caagggctat ttttccctga agtgttacct aaattagata gcattgatga attattggat
     3061 ttacctttgg ttaaacgcag ccaaaaaatt ctttcagcct taatcggcga agagttaccg
     3121 caagaaacct taaatgcaat ggtaaaaaat gcgttcactt tcccggcacc gcttgccaaa
     3181 gtcaatgatg atatttatgc gttagaatta tttcacggtc cgactttagc cttcaaagat
     3241 tttggtgggc gctttatggc tcaagcctta gccaatgtac gaggagacgg caaaattact
     3301 attttaaccg ctacctcagg tgacaccggt gcggcggtgg ctcatgcttt ctatggtttg
     3361 gaaaatatca acgtggtcat tctttacccg aaaggcaaaa tcagcccatt acaagaaaaa
     3421 ttattctgta ccttaggcgg taatattcgc actgttgcga ttgaatccga ctttgatgct
     3481 tgccaagcct tagtgaaaca agcctttgat gatgccgagc tacgccaagc gattggttta
     3541 aattccgcaa attccatcaa cattagccgt ttactggctc aaatttgcta ctactttgaa
     3601 gcagttgctc agttaccaaa agaaaaacga gataacgtag tggtttcagt accaagcggt
     3661 aatttcggta acttaaccgc cggcttaatt gccaaaacat taggtttacc gattaaacgt
     3721 tttattgcct caaccaatgc caatgacacc gtgccacgct atttacaatc aggcaaatgg
     3781 gaaccaaacg caaccgttgc aaccctttct aatgcaatgg acgtaagccg cccgaacaac
     3841 tggccacgag ttgaagaatt atttaaacgc aatggctgga gtttgtctga attgggttct
     3901 gccgcattaa acgatgccga aaccgaagcg gctttgaaag ctcaatatgc agaaggttat
     3961 ctgtgtgagc ctcacggtgc tattgcttac caaagcttga aagatcagct acaacaaggc
     4021 gaaaccggta ttttcttatg caccgctcac ccggcaaaat tcaaagagtc ggtggaacac
     4081 attttagcga ttgaattgcc gttaccggaa gcattagata agcacaacaa actgccactg
     4141 ttatccgatg aaatggcagc agattttgca acattgcgtg catatttgtt gaaataaata
     4201 ttcaataata gaaaagggat taagtattaa acttaatccc tctttttatg cattacaagc
     4261 ggttatattt gcctattatt ttgcaaaata agcagctaac tcatcactac cgccaatata
     4321 tttaccgccg ataaatactt gtggcacaga ggttttacct gtaattgctc gtacagaaat
     4381 tgtgcttgca tcacgaccta acacaatctc ctcaaaagta tagccttgct cttttaataa
     4441 tgcttttgct tttgcacaga acaggcaacc cggtttagtg ataatcgaaa cagactcttt
     4501 agctgtccaa tttggactta aatatttaat cattgtatcg gcatctgata ctttaaacgg
     4561 atcgcccggt tcttgtggct caataaacat tttttccaca ataccgtttt tcaccagcat
     4621 cgaataacgc caagaacgtt taccaaaccc aaggtcattt ttatcaacta atagccccat
     4681 accttctgtg aactcaccat taccatcagg aataacagta atattttcag attcttgatc
     4741 tgctttccaa gcgttcatta caaaggtatc attaactgac atacagatga tatcatctac
     4801 ccctaatgcc ttaaattcac aagctaattc attatagcga ggcaaatgtg ttgatgaaca
     4861 agtcggtgta aatgctccgg gtaatgaaaa cacaaccacc gttttgttat taaataactc
     4921 atcggttgtg acatcaaccc aagcatcgtt ttgacgtgta cgaaatgtta cactgggtac
     4981 tttctgaccc gtcatatctt taaaagacat attaatgttc tcctatagaa ttatatatta
     5041 caaaaatctt aggcattata ctcacaaata tggcataatt cagcctatca gaacaatagg
     5101 aaaaatttaa attggaggaa tcaagtgaat attcgagatt tagaatacct tattgcactt
     5161 gcagaacata agcatttccg tcgtgcagca gaatcttgta atgttagcca acctacttta
     5221 agcgggcaaa ttcgcaaatt agaaggcgaa ctaggcacta ttctgcttga aagaaccagt
     5281 cgcaaagtcc tctttacgca agcaggctta acattagttg aacaagccaa ggtagtttta
     5341 cgtgaagtaa aaattctaaa agaaatggca agcaaccaag gtaaagagat gtctggcccg
     5401 cttcatgttg gtgtaatccc aaccttgggg ccttacattt cgccaattat tgtgcctgca
     5461 ttaaaagcag aatttgcaga tttagagctg tatatttacg aattacaaac caaccaatta
     5521 ttagatcaac ttgaatccgg ccagcttgat tgtggcatta tctcatttgt aaaagagagt
     5581 gaatctttta ttgaagtgcc tatctttaat gaagaaatgt acttggtagt tccagaacaa
     5641 cacgaatggg cagcgcttaa aaaattcgat atgaatttat taaaaaaccg tgagttgctc
     5701 tttttagaca gtggccattg tttacgcact aatacgctag actattgtct atccattgga
     5761 gcaaaagaaa atccacactt taaagctacc aaccttgaaa ccttacgcaa tatggtagca
     5821 gcaaatgttg gcctagcatt gattcctaaa ttagccgcta aaccgattaa aggagtacat
     5881 tatattccac ttgaaaaccc gaaaccgttt cgagctgtgg gaatggtgta tcgaccaggt
     5941 tcaccattac gcgcccgcta tgagcgttta gctcaagcca ttactaaaat tatgcaatcc
     6001 gaggcgtaaa aatggcaaac ggtatgagtg tgcgcgcaat tcagaaagaa aaaacacgca
     6061 gagcattagt agaagccgcc tttaatcaat taagctcaga aaaaaatttc tctaatctca
     6121 gtttgcgtga agttgcacgt gaagctggag tcgcaccgac ttcgttttac cgccacttta
     6181 aagatatgga cgaactaggc ttagcaatgg tggacgaatc cgggctacta ttacgccaat
     6241 taatgaggca agctcgaaaa cgaattgcaa atggcggaag tgttgtcgtg gtttcagtgg
     6301 aaacattctt cgaactgatt gccgaccgcc ctaacgtttt ccagctatta ctacgcgaaa
     6361 gctccggtac atcgcaagcg tttagaaccg cagcatcacg cgaaattcaa cattttgtag
     6421 ctgaattggc ggactatatt atgagcaaag ataatcacag taaccgagaa cttgcttata
     6481 ttcaatcgga aggtttagtc acgctagtat ttactgccgg ttctcatgct ttggatatga
     6541 acaatcaaga acgggaaaaa ctaaagcaac gtgtcattat gcagctaaga atgctgattc
     6601 gtggctccac ctattatgcc aataaacaag cttcatcaac ataaaaaaac agacgcctaa
     6661 gcgtctgttt ttattctttc gtaatatatg cagtcgatag ctttaaccat tctagtgcta
     6721 attgatgatg ttcagataac gcactccata acgcatcttc tgacaagata ctataattgc
     6781 ctttagtatc taactgttca tcaaaactat catgtaattc acgccattcc gggctagcat
     6841 aaaaccgact taagggttcc aaaagtgcag aagctcgttt ccattgctca atcccctttt
     6901 ccaattctgg taatagctct acccattggt tataacaatc ctgcattttc tgaatatctg
     6961 cttttttcat tctttaccgc ttacaccata aattttagcc tcaatataac ataaaaatcc
     7021 ccttccgaag aaggggattt caactcaatt aggctaaatt accactggta tccaacgcct
     7081 acaccgccac caaagtcgcc tcggctattc gcattacctt gtaatttcaa gataagctta
     7141 ccgttatcac ttgaacgtga ataacctact gcaagcgcgt tttcaccttt aaatgtacca
     7201 cctgctgcag ccaccataga tttacctgga atgtaaacct gcggtaacgc tgctgctgca
     7261 tttgaaccgg caataccagc acgggcttca cggttattac gatggatctt gttatttaag
     7321 tgattaacag caccttttaa ctgaccaaca ttaacagcat cggtatctgc ctcacctgct
     7381 ttaacattag taatacggtt accaccatta tttaagccat ctttcgttaa gcttaccgct
     7441 tttcctgcag agccattatt aatggttacg ccattattgt tcaccaatgt atcaccagtc
     7501 ttgctagtaa attcaggggt atctgaaacg gctacagtta catcagaacc tttacgtgtc
     7561 actttgatat tattacctgc attcacgctc actgtactac ctgcttttac tttcgcaggg
     7621 gctttatccc cttcaaccgc acctgtacca actgctttag aatctacgtt ccagcttacg
     7681 ttgtttacgg catttgctac tgttgttgca ttcacaaagc gtgaaccggt accgttagga
     7741 tcttgaacat tgattttgcc gttatcagca acggttaaat ctgtgatgtt tacgttcact
     7801 ttcacctcac cagccttatc actggtaata gttgtaccat taccatttac gatattgata
     7861 gaaccatctt catcagtacc aatgttatta ccattcactt tcgcatagtt gttcagctgt
     7921 ttaccgttga taacatctgt gcttactggg ctaatatcgc catctgctac attagtgatc
     7981 ttagttggtt taccgtcttt atcaccgact ttgatgttat caccatcatt agtgattttc
     8041 ggaccattct cactgaactg tacgctattg aagctcacat cttttgctgt cgcaaaagta
     8101 aattgattac catcacgttt aacagttaag ttatcacctg cttcaaacac aacttcttcg
     8161 cccgttttca ctagcttagt cgcagcttgg tcaccggcag ccttattacc tgcagattta
     8221 atattaaagc ctgcattatt cactgcatct gcaacagttt gagcaatcaa taacgcattt
     8281 ggctgagttg gtgctttcac cgtaccatct tcgttgttac ctaactcact ggtatttgca
     8341 gtgatgttac cttcattatc tactttaata gtagtaccgt cagttttcgc ttcaacgtta
     8401 taagtagttg aaccatcagc attcgtgcta ggtgtgatag ttacacctcg gttaccgccc
     8461 actttcgtag tagctgcatt agttgccgct tgtaaatcac ctaagttcac tacgttgttt
     8521 agcttgtcgc cttcagcatt tttaatcgct tctgcacggt ctttaccctc tggggttgag
     8581 ccatcttcgt tacgaacact acttgccaca ttgcctaatt gaacaggggc ttcacctgtg
     8641 aatttagccg tattgcttgg cgttgagcta tcagtaggat cttggtttac aaactcaatc
     8701 gggctatcta ctttaatcgt attcttaccg tctttgtttt caaccgtgac cgttgtacct
     8761 ttaccgttaa taaaatcaac cgtgtcatta tgtaccacag tatcaaccgc tttgccgtta
     8821 ccttgtaaat tccagcctgc atttaataca tcacctaatg ttgctgcatt acttaactta
     8881 tcagctaagt tggttggatt attgtctgct ggttgaacct tatcatctgc agtcacaggt
     8941 atcagattag acgcaacatt gctaatcgct ttattacctg cattgatacc atctttattg
     9001 atagtaattg gattatttgc aggatctgct tcatcagttg gtacagttac agtgttagag
     9061 gttacgctgc taaacttaac atcatcttta gtcgcataaa tgactttacc atcagcttct
     9121 tgcttcacag ttaagttttt acctgcaacc atttcaactg ctttacccgg attaatcagt
     9181 tcatcaccac ctgaaagctt ctctccacct tctacagccg acgttttcaa cgtaaagcct
     9241 gagttattga tggcgttggt aatatcacct gctgtcacta atttcttagc atcatcagcg
     9301 gttggttcat caattctacc gtcattattt gcatcattta atgccgtagt gttagccttg
     9361 atcgcaccgg ttgtaggatc ttttacaatt gttacatcgt ccgtattcac agaaagatcg
     9421 aacacattcg cgccatcagc attttttgtc gtgttaaccg taactgattt atcagtcgac
     9481 ttcacttctt cacgagatgc catagcgaaa gtataaagct gactaccatt tactgcatct
     9541 ttactatctg catttacgtc accggcagct acattagtta ctttgactgc attaccgtct
     9601 ttgtcaccaa cattgatatt accaccattg ttagtaatct taggaccttc atttccgaac
     9661 tgtacactat caaaattcac attttttgca gttgaaacag taatgttatt cccatcacgg
     9721 gtaatctcaa tgtttttacc atttaagaac tgaaccgtat cacctgtttt caccaggctc
     9781 ttctcgtcac cgtttgcttt aatgttaaaa cctgcattgt taattgcatc tgcaacggtt
     9841 ttagctgtta ctaatgcatt tggttctgta ggctcttcca ctttaccatc agggttattt
     9901 gttaactcgc tggtgtttgc cgtgatttcg cccttatcgt ttaccttaat ggttgtacca
     9961 tccgtttttg cttcaacggt ataagtggtt gagccgtcat cgttagtttt agatgttaca
    10021 gtaacacctt tatcaccttc cactttggtg gttgctgctt tcattgctgc ttgtacatca
    10081 cccacattca cagcattatt caacgtatca cctgttgcgt tgttaatatt atccgcaatc
    10141 gctttacgct ctgcatctgt tggtgctgct ttatctgcaa atgtaccacc cacgccgctc
    10201 ttcagattag tgattgagcc tgttgtatct ggtttaccat tgctcatatc aatgctgttg
    10261 aatgcaacat tatctttcgt tgtgtaagtg aatttaccgt cagcttgggt aagtgtcata
    10321 tttttacccg catcaaaggt aactgtttca cttggcttga ttagctgtgt tttcttacct
    10381 ttggtttcac caccatcaac accatcacct gctgttacat taaagcctga attattgatt
    10441 gcattagcaa tatcacctgc cgtcactaat ttcttagcat cgtcacctgt aggctcagta
    10501 actttacctt caggagaatt atttaatgtt gtggtattcg ctttaacttc gcctgttgtc
    10561 ggatctttca cgatagtaac gttgtcagta ttcactgtca tattaccgtc attatcacga
    10621 ccgatagatt tatccgttgc aacatctacc gtatattcag tattgccttt atcatcttcc
    10681 tttccggctt taacagttac ggctttagaa ccagctacta cagatgaggt tttctctgaa
    10741 ttattaattg catcagccac attaccacga gttactgtag gagcacctgc tttcgctaca
    10801 tctaccgtat agattgtttg accattatca cctgtttcag gtgcaccaac agttgctaaa
    10861 cctgaacctt tcacttcggt tttgtgacgc tgctgcttgt tttaactgac ttacattcac
    10921 cgcatcagta tcagcttcac ctgctttcac gcctgtaatt ttggttggat taccatcatt
    10981 acctgcaata ttaacattac catctttatt cgtgattttc gggccattat caccaaatgt
    11041 tacgctatca aatttcacat ctttcgctgt ttcgtacgtg aatatagtgc caacacgttt
    11101 aacttttaag ttatcgcctg ctgcaaaaat cactttttcg cccggattaa tcaactctgc
    11161 tgcttcttga tcaccatcag ctttattgcc accagatttt gcattccaac ctgctttttg
    11221 aatcgcttca gaaactgttt ttgtagttgc aactttatct tcttctgcag gtgtagttac
    11281 tgcacctgtt gtgttatcaa ccgtgataga accggtatcc acatcaaagg ttactttacg
    11341 ccatcagctt cttgtgtaac atttgaaact gtacctttac cgtttacaaa ttgtacagat
    11401 tcatttgggg tcactgtgcc tttggtttca cccgcattat ctttaatatt gaaaccttgg
    11461 tttacatagt tatttaagtt cgtaattgca tcgccaacgt ttgttgcagt attaccatac
    11521 tgagttccag ctgcattcgt tacattatat ttaggctgag tcacagagcc atccggattc
    11581 acaacagaac cgccaccaaa attatttgca gttgaatttg caaggttact ggttgcattc
    11641 attgccatat aaagttgtga accattaatc gcatcggttg atgtagcaga aatctgaccc
    11701 gctgccacat tttggatttg acgctcttta cctgcagagc ctacagaaac aacatagtta
    11761 gtatctttat ttaccccggc aaagccatta taagtaatac cccctaccgt tgcattttca
    11821 gttggtgttg ctgcccttac gactgattcg ctacccaaag caacagaact attcagagta
    11881 gcttgagctc ccatacctaa tgctgtagca aattgagctg ttgcattagc acgtgtacca
    11941 acagccactg ctgattgtgc tgaggcaatt gaatttgcac ctacggctaa agaggcattt
    12001 gcactcgcat ttgctgcaac accaaaggca gaagcttttt cagccgttgc attagcatta
    12061 gaacctaccg ctgtagcatc acctgctgtc gcatttgttt ggcgaccaag tgcggttgta
    12121 ccattagccg ttgcatttgc tgaatgacca actgccgtag cttgaatacc ttttgaaacc
    12181 gtagcaacac ctaaagataa cgctccgtta ccatttgcat ttgagtttgt gcctaatgct
    12241 actgccgctt gctctccacc tgttgccgtt gcattcgggc cgatcgcaat tgagtttctg
    12301 ctcttcgcgc catcattagc ttgattctca ggtacggttg aattcacaga gaaatattga
    12361 atttggcttg cttgcgcagg aatattgaca gaaagatcat aaataaccgt gccatttgca
    12421 tttctctctg tactttttac agttactgta ccatcgtttg aaacaacagt agcttgggta
    12481 tctttcgtaa agtcatcaat ggctttctta gttaaaccaa tttcatagtt agttgtattc
    12541 gcagcagttg cagctttacc tgttacagta atgtaatcag ggctagaaga atttgccgtg
    12601 gtgttatacg catttactgt ataaatagtt tgcccatttg caccggttgc atttgtaata
    12661 ttaacattgc tacctgcaac aacttctgtt tttaccgctt ttaatgcttc ttcaatcgta
    12721 tttttatttg ttccaccaat attagtatag gtaacagaac catcaggctt tactgtagca
    12781 ttaccaccta aaatattttt agttgaatta gcaaggttac ctgttgcgtt cattgccata
    12841 taaagctgtg aactattaat tgcatcggtt gatgtagcag aaatctgacc cgctgccaca
    12901 ttttggattt ggcgtttgat cgtgtttgag ccaacagaaa caacattccc tgctgccgta
    12961 gtattagccg caaagccgga ataagtaata ccatttaccg tcgcagaagg aactgccaca
    13021 gcgttggaaa cggttgaatt actccctaaa gcaaccgaat tatttagcgc tacattagca
    13081 cctgagccta aggcaatagc aaaaccggca cttgctttag cactatcacc aattgcaacc
    13141 gtagattggt tggaagatac tgcacttacc cctaaagctg tcgcattaac acctgaaact
    13201 gtcgcattat aaccaatcgc tgtacctcta gttgcagtag aagttgcatt agcattagca
    13261 cttgaaccta aagctaaaga ataagtagca tttgcaacag acttatcccc cattgcacct
    13321 gaacccattg caaatgaacg agtgccacta gcggcagatc tccatcccat tactgttgaa
    13381 cggttaccag tagctagagc tcctgcacca aaagctgttg cacggttacc tgttgcagca
    13441 gtatccgtac ctaatgcaat agcatttgct gaagtcgctc tagcccccat accaatagca
    13501 atagaaggaa ctaatgccca attctgacca gtgttattga gactctctac accaatatta
    13561 tagtaatgta agaagtatct tctggatcca ctaaatttgt tctatgcgtt gcattcgtat
    13621 ctgtaccaat tgcaatagta gatctgccag ttgagattga atccgcacca atagcaattg
    13681 cgttctccga tgatgcagtt gcttgtgttg aaatataatt acttgttgtt gaacctataa
    13741 gatacaacag ccacagcatc attagctccc aacacggcac tagctccagc caataaagcc
    13801 aatgttgcct tacttgcaga actaacagat ttcgttttac ctttcgctcg ttgtaattca
    13861 gatactgcaa cccaactttg tgttgcctga ttccaaataa ctttaaaaat ttgattcata
    13921 atcgacccta tataaaaata aaaaagatta cgtagaacct atgttcaaca taatcttcac
    13981 caatataaaa aaccgccacc tatttaagtg aaataactta cttatagact cagaaattta
    14041 agtgcgcgta ttttacgcta tttgtaatat aattcatctt ctggagtgta aatttattgt
    14101 aaataatacg aggaatctaa ccgcttgtta taacgcaaaa caccttgact taaatcaagc
    14161 cactacctca ttttgagggg agatttatac gcagtgaaat tttaaaataa gctaaggttt
    14221 acggataatc gttcaacact attgaattat cactgtagtt atcgttaaaa aggtatgctt
    14281 ttatgaacca attcttccct ctaatcttta gcttaactct attttccggc gtaactttgg
    14341 cactagaaaa agcacctcga actatgccga cagaaggaat aaataagccc ctacttggac
    14401 aaattctatt ctttgacaat atgctgtcac acaacggttc acaaaactgc tccagctgcc
    14461 ataatccgga ttatgccttt attgataacc gcactactcc ggcaaaaggg gtggtttcac
    14521 aaggagatac tccaaccaaa ttcggcaaac gcaactcccc gaccatgctt tatgcgaaat
    14581 actcgcctga gttccacttt gatgagcaaa gtcaagaata tatcggcggg cagttctggg
    14641 acggacgagc caaaaatctc gccgagcaag ccggtatgcc gcctatcgac ccaaatgaaa
    14701 tgggaatgcc taacaaatta gaagtagcca aaagattata taatgtgccg atgtatcagc
    14761 gatttttagg gcaattttac ggtgaaaagg tatgggaaag ttatgaaagc gtttatgcgg
    14821 caatggaaga tgcgattgcg acattccaac aagaaaacaa acttctcgct ccatttgatt
    14881 caaaatatga tctattttta aaaggcgagg tacaattaac tgcattggaa gaaaaaggca
    14941 gagctttatt tttcaataaa gctcaaacta attgtagtag ttgccaccaa ttacagagtg
    15001 ctgcaaacca ccaagaagaa acctttagca actatcacta ttacaatgta ggcgtacccg
    15061 gtaacccaga cttgatagcg gttaacggct tcgcaccaga cttcgtcgat ttaggcttat
    15121 ttgaaaaccc aaatgttaaa ggtgatgaaa cacaaaaagg caaattcaaa accccaacat
    15181 tgcgtaatgt tgccgtgact gcactttata tgcacaacgg tgtgtttaaa gaattaaaga
    15241 ctgttttgct gtttttagac agctacaata acccggagcg aaaaatcaac cctgaaaccg
    15301 gcacggcgtg gcaacaagca gaatttgaac ccactatcgc ccaccaaaaa ctcaaagcca
    15361 aacccttaag cgatgaagaa attgatgccc tcgaagcatt tttaaaaacc ttgacggatg
    15421 agcggtatag aaaataaggc tacaagcggt aaaattttgg ggaaatttta ccgcttgcgt
    15481 ttaactaccg tgttagctca ctttctaact tttccaatgc ctgcaaatct tcccaatctg
    15541 cctctttctg ttttaaacat ttacgctgaa tatcaaattt ttcgtattgc tctctgacaa
    15601 agctttccat ttgtttatgc gtgattgttc caccatttcc taatacagaa aagccgttaa
    15661 actcaatcaa catatctaca tttcttcgcc agaaacctaa cgtaagatct tggttgttct
    15721 tcacacgtaa ttcggcactt tcaagaaaga tcattaccaa gcgatttaaa gaatccagct
    15781 cattattatc taaatagttt ttcgcaatca caatatcgcc tttacgcacg acttttcctt
    15841 tccagctagt taatcccata ttcatcttag tcgcatcagc acgttgacaa atcaactcag
    15901 cggcagtgtg tttggttatt gcataaatga gcttattttg cgtttctgca aaaaacattt
    15961 gcgtattttt atctgttttg tcgtaatcgc tagagagttt gaaaagctct cgtacttttt
    16021 gatagaaacg caattcactt gcccgaatct cacgaatctg ttcaagtaat tcatcgaaat
    16081 aatctaaacg accctgcgga tttttcaaac gctcgctatc aattaaaaaa cctttttcga
    16141 gataagtgcg taatgtgctg tttgcccatt ttctaaactg tactgctctt gggctacgaa
    16201 ctcgaaaccc tatcgccaga atcatttcaa gtgaataatg ttttacttga taattcttgc
    16261 catcttgagc agttatcaag taatccttga taactgaatt ctcatctaac tctttgtctt
    16321 ttaagatatt tttaatgtgt tcggatatat tttgcacaga ggtgtcaaaa agttctgcaa
    16381 gttgattttg tgtcagccaa gcttcatttt caaccactaa caaggctaca ttgcttttgc
    16441 cgtcttccgt attataaata attaaatcgt tcatatttta ttctgtttat tggtagagat
    16501 attagtcgct attttcaata aaacatgtat aaatatccag aattgatttt gaatttttcg
    16561 atgcagatca caaaaataga gagttataca aacaagcggt aaaattttgt aaaaaattta
    16621 ccgcttgtaa aggttactta tcagctaatt tggcaagtag tttttgatga ataccgccaa
    16681 aggctccgtt gctcatcact aagatgtgat cggtgggttt ggcttctttg acgactagat
    16741 cgactaaatc atcaatattt gccgaccaat acgccggttg cgataacaca ttggtaatct
    16801 cgctcacact ccacgcaata atatcaggct ggtaaacaaa cactgcttcg gcatcgtgta
    16861 ggcttggggc tatttcatct ttatggacac ccattttcat tgtatttgaa cgaggctcta
    16921 acactgccaa aatgcgttga tttttgccga ctttaccacg cagagcatca atagtcgctt
    16981 ctatcgcagt tgggtggtga gcgaaatcat cataaacggt aatgccgttt acctcgcctt
    17041 tcacttccaa acggcggtta gcattcacaa acttgcctaa tgcctcgcaa gccccttgca
    17101 cttcaacccc tgcgtgatga gcggcggcaa tcgccatcag agcattatgc atattgtgct
    17161 tgccgataat cgaccaatgc acctcgcctt gtttaacgcc taagtgaaac acctcaaact
    17221 gtgagcaatc ggcatttaac ggtttagcaa accattcgtt ctgttcgcca ataaattgaa
    17281 gctggctgta actgcccatt tttagtgtat cttgcacgtt ttgatcagcg attgccgaca
    17341 aaatacagcc actttgtggc atcgtgcgaa caaggtggtg gaactggcgt tgaatcgctt
    17401 ttaaatcatc aaaaatatcg gcgtggtcaa attccatatt attgataatc agcgttttcg
    17461 gggtgtaatg cacaaattta gaacgcttat caaagaacgc agaatcgtac tcgtccgcct
    17521 caatcacgaa gaatggactg ttaccggcac gagccgaaat gccgaaatta ccggcaacac
    17581 cgccaattaa aaagccggta tcaatcccat tttggtctaa aatccacgct aacattcctg
    17641 ttgtggtagt tttgccgtgc gtgccggaaa ccgccagcac ccatttgtct ttaagcaaat
    17701 gatcgtgcaa ccattgcggg ccggaggtgt aattgagttg gttgtccaac acatattcca
    17761 cgcacggatt accacggctc atcgcattac caatcaccac taaatcagga gccggttgca
    17821 gttgagcaac atcgtaattc gggataattt caataccgtg agcagctaaa aaggtactca
    17881 tcggtgggta aacattagtg tctgagccgg tcactttata gccaagctca cgggcaatca
    17941 ttgccacacc gcccataaag gtgccgcaaa tgcctaaaat atggatatgt tttttcatct
    18001 ttttatattt aaaatgttag aatcatcccc tctccccttg tgggagaggg atagattttt
    18061 tcttcgtgca gaagaaaaaa tcagggagag gggtaagcgg tcatttttag gcttaatatt
    18121 gtaagctccc tctctctgaa aaatatttct gaacgaaata tttttcggtc tcaatactcg
    18181 ctacgctcgc tcctgtggag ccgttggcaa agccaacgtt caaatgtaaa catttgtccc
    18241 acaaggggag aggtgcgctt tagatgaggc gtaccatccc tcgttcacat caattaatca
    18301 atattcttca actcttcttc cgaaagctgc tcttgttggc tttgctcaac attgccatct
    18361 ttcactttaa attcaaggtt ttggaaataa gcttcacgga aggtaacata agggtcttga
    18421 gcttgctcta acaacgcatc ttgttctaat aatttagaac gggtatctac cccttgtacc
    18481 acaaatttag cgatagacca aggtgaccca acataagtca gcaccgaata accggtttcc
    18541 accgcactac caataccttg acgaggtgtg gttgctccat aagccggcat cataatatag
    18601 gagccggaag gcacgccgtg agcgcctaaa ctctcaccta aaccacgttg tccgttattt
    18661 aaacgtaacc cctcatctaa actcgcccag tcaattaacc cacctaaacc aaacacagtg
    18721 ttgatccaga agcggttgaa gtgaaccatc gcttttttac cttctccttc aattaagcgg
    18781 tttacaaagc tcaccggctc atcaaggtta ttagcaacat taattaagcc tgttttaacc
    18841 gggcttggta catactcttt ccaaccttta gctaccggtt ttaacacata agggtctaaa
    18901 tagtcgtaat tgactttcca catcgcacgg ttaaacccct caagtgggtc gtctcgcacg
    18961 ccggtttctg ggttaatgct tgatgaacaa gcggttaaaa atgccacact gagtagcata
    19021 aacatcggtt tgaacgactt gagtttcata aattgaacct tttgcagaga aatttgtcca
    19081 ttgtagcgaa gttgataaaa aatacaaaac aaaaagccgt tttgcctcta gaaatctaga
    19141 cgtctagatt gagatatagt tcgcttttga ttacaataca ggcaacattt aaggagcaaa
    19201 caaatggcag actggaacgg cgaatatatt agcccttatg ccgaacacgg caaaaaaagt
    19261 gaacaagtca aaaaagtgac ggtatccatt ccaattaaag tattggaaat tttaactaat
    19321 gagcgaaccc gtcgccaaat caaaaatctt cgtcacgcaa ccaacagcga attattgtgc
    19381 gaggcttttt tgcacgcctt taccggtcag cctttgccga atgatgaaga cttgatgaaa
    19441 gacagggcag atgaaatccc tgaagcggca aaacaaaaaa tgtgtgagct gggaatagac
    19501 ccggacgaat ggcaatatta gacacacctt gcaactgcga ggttcttttt atgttttaag
    19561 gagactttat gtatcaacaa ttaacaacag aagcacgttg ggctgtgttg cttacgctga
    19621 tttatctgct cggctgggta ggttttgctt acttttcacc gcaaggcaga ggcattttcg
    19681 gctttccgat ttggtttgaa ctttcttgca ttttcttacc cgtactattt agcttagttg
    19741 ccaccattgt cgtcaaaaaa gtgtataaaa atatcgatct tgaggtgaat aatgaatagt
    19801 gaaatgattt tacccctgat tgcttattta atttttgtgt ttggcgtagc gttttatgct
    19861 taccgtaaac gccaaggcgg aagctttatt tcggaatact atatcggtgg gcgttcaatg
    19921 tcgggctttg tgttagcaat gacaaccgcc gccacttatg tgggggcaag ttcctttatc
    19981 ggtgggccgg gtgctgccta taaatacggt ttaggctggg tgttactggc aatgattcaa
    20041 gtgcccgcag tgctactctc tcttggagca ttaggcaaaa aatttgcctt acttgcccgc
    20101 aagcataata gtgtcaccat taacgatatg ttattagccc gttaccaaaa caaatttgtg
    20161 gtttggattg caggactagc cttattactt tcgttttttg cgatgatgac ggtgcaattt
    20221 atcggtgccg gtcgcttact tgaaaccaca ctcggaatcc cttaccaaac agcggtaatg
    20281 atttttgcca tcacagtcgg gctttatacc tttatcggcg gttttagagc ggtggtgcta
    20341 accgatacta ttcaaggttt agtaatgata gtcggcacaa gcattttact cgctggtgtg
    20401 atttatgcca caggcggagt ggaaaatgca atgcacaccc ttgaagccat taacccacaa
    20461 cttaccaccc cttacggcat tgacgaacgc ccgcttgatt tcacctttat gacttcattt
    20521 tgggtattgg tttgctttgg tttaatcggc ttaccgcata ttgcggtcag aagtatggca
    20581 tgcaaaaaca gccaagcctt gcaccgagca atgattatcg gcacggtagt cattgcaatt
    20641 ctaatgtttg gaatgcacct ttcaggcgta ttaggcagag cggttgtgcc tgatctcaaa
    20701 gtgccggatc aagtcattcc aacactaatg gtacaagtgc taccaccggt ggttgccggt
    20761 attttccttg ccgccccaat ggcagcgatt atgtcttcga ttgactcaat gttgattcag
    20821 tcgtcttcaa ccttaattaa agatctctat ctggcaatta agccgaatgc cattaataac
    20881 gagaaaaaaa tcaaattgtt ctccactatt actactctta cttttacggt attactcgtg
    20941 tttgccgccc taaccccgcc tgagatgtta atttggctga acctactctc tttaggtggt
    21001 ttagaagcga ctttcctatg ggtaattgta ctagggttgt attgggaaaa ggcaaatgcc
    21061 accggtgcta tttactcaat gctggcaggc ttaagttgtt atgtattaat gactaccttt
    21121 aagattgcta tttttagctt ccacgccatt gtgccttcac tgctaattgg tttgattgct
    21181 ttcttaatcg gcaaccgatt tgctcctaag gtgtaaaata aaataggcat agtggtatgg
    21241 aagttcacta tgcctatttt gcaaaatttc cgctcaattc aaccgcttgt agttaataag
    21301 tggcattatt ttctggatta ttctgcttag tcgccattct aagtaacgta taacctaaaa
    21361 tcgctgaaac cgcagagccg agtaaaatac ctaatcgagc tagagcggta atactttccc
    21421 cagcctcact tacatcaaag gcaagacttg ctaagaacat cgacattgta aaaccgatac
    21481 cgcatagcac cgcaatggca aaaatttgct taaaattaac cccttgcggc aggctggcaa
    21541 ggcggaataa tactgctaaa taactaaaac cgaatacacc taaggttttg ccgataatta
    21601 agccgagcgc aatacctaac ggcaatggtg atgagagttg ctccattccc atttctaata
    21661 agtaaacgcc ggcattagcg aaggcgaaga tcggtaaaat catataagca caccaagggg
    21721 caagaatatg ttctagctcc tctgccggtc gttccccatg tttacctttc agcggtacgc
    21781 agaagccgat gatcacgccg gcaagggtag cgtgaacccc tgattttaaa acggaagtcc
    21841 atagcactaa gcctactacc aaataagcac agagtgaggt cactttaaag cggttaagta
    21901 gcactaagcc gataatcgca atcgcggcaa tagttaaggc ttgcacactg atttcttgcg
    21961 aatagaaaat ggcgattacc acaatcgctc ctagatcatc aataatcgct aatgccaaca
    22021 aaaatgcctt taaagccaat ggcacacgag tgcctaataa cgccacaatg cccaccgcaa
    22081 aggcaatatc agttgccatt ggaattgccc aaccattatg atattcaggg tggttttgat
    22141 taatcgccca ataaataatc gctggaacaa tcataccacc tactgctgct atcgcaggaa
    22201 aaatagcttt cttataactt gaaagcgaac cttcaaacaa ctcttttttt acttccagcc
    22261 ccaccaacgt aaaaaacact gccattaagc catcgttaac ccagagtaat agcggtttat
    22321 tcaaggcaaa ttcaccaaac tgtacactaa caatcgtttg taaaaactca aaatagaaat
    22381 cacttaagga ggtgttggcg cacacaattg ctgcaaaagc aaaaaccaga agcaatacgc
    22441 ctcctgaggc ttcagatttt aaaaattctt ttaatttttc cacttaactt tctcctatta
    22501 atatttgttt
//
LOCUS       DANMCL010000043        22398 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.043, whole genome shotgun sequence.
ACCESSION   DANMCL010000043 DANMCL010000000
VERSION     DANMCL010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 22398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22398
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.043"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            196..1743
                     /gene="sbcB"
                     /locus_tag="PXF40_001412"
     CDS             196..1743
                     /gene="sbcB"
                     /locus_tag="PXF40_001412"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HDL5802746.1"
                     /translation="MSDKFSFFFYDYESFGVSPALDRPAQFAGIRTDADFNIIGEPVM
                     FFCKQTPDYLPSPEAVMVTGITPQQCNAEGVSEPEFAARIHAEFSRANTCTIGYNNIR
                     YDDEMTRYTFFRNFYDPYEYSWKNGNSRWDLLDLVRACYALRPDGIEWPTDETGMPSF
                     KLENLTKANGIAHENAHDAMSDVYATIAMAKLIKQKQPKLFDFFFNLRSKKEVEKLID
                     TGEMTPLVHVSGMLGNYRGNTAWVVPLAWHSTNQNAVIVCDLSGDMNGLLTENAEVLR
                     QRLYTKRDELAENELPVPLKLVHINKCPILAPAKTLLPENAERLGIDRALCLENLKTL
                     KAQKSLIREKVIEIFNEERTFEPSTNVETTLYDGFFSPADKNNMAILRTLPPEDLANH
                     GLKFEDPRVEALLFHYRARHYPQTLSRAEQIKWQKHCNQQIEAKAAQFAQSIDDLFQQ
                     HHDNPEKVKLLENLTAYAEQISQQQAVIYRQNVAKDEKLLSELNRVAEQPLDKTEKLK
                     MLKELIK"
     gene            1740..2339
                     /locus_tag="PXF40_001413"
     CDS             1740..2339
                     /locus_tag="PXF40_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HDL5802747.1"
                     /translation="MTMDNLPLEQHPFDPILPEQATVVMVGTFPPTSEKRCMEFHYPN
                     FQNDMWRIMGNIFYADPNYFRVGEEKRFDPIRIEAFLREKGVALCSSAKTAIRLKGNA
                     SDKDLKIVDPIDMDELLLKLPKLKWLFTTGGLATDTLLGLLPEKHKAPKTNEWVVYPY
                     SATRELYLYRLPSTSRAYPLSLANKTEAYRQFFRTAGLI"
     gene            2351..3169
                     /locus_tag="PXF40_001414"
     CDS             2351..3169
                     /locus_tag="PXF40_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HDL5802748.1"
                     /translation="MKYDLHAHSTASDGVLSPTELVQRAVEQGVTMLALTDHDTISGI
                     QEAKNFAQNQPLELISGVEISILWQEKSIHLAALNIDENNEELVKFLDNQAQLREERA
                     VEIGEKLAKVGIANAYEGAKALATGEVTRAHYGRFLYEQGYVRNIEHAFKRYLGMGKP
                     AYVKPRWSSLEDAVNVTHTSGGVISIAHPLRYKMTARWIRRLIADFKQAGGDGIEVSG
                     CGQTPDQRQLLARWAKEFDLYGSVGSDFHYPTGWIELGKSLELPQECKPIWTLF"
     gene            complement(3205..3824)
                     /locus_tag="PXF40_001415"
                     /pseudo
     CDS             complement(3205..3824)
                     /locus_tag="PXF40_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596976.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+/Pb2+ permease"
     gene            complement(3835..5031)
                     /gene="efeB"
                     /locus_tag="PXF40_001416"
     CDS             complement(3835..5031)
                     /gene="efeB"
                     /locus_tag="PXF40_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HDL5802749.1"
                     /translation="MMAETTSRRDFLKHTALVGAGLLSAPAFALESRQISEKSQNQYD
                     FYGKHQAGIVSPAQKHIYFLVLDLDTTDIAKVKTLFQNWTEYSRNLTLGKNVKPYSAN
                     AYVPPADTGEADSLSAQNLTLTFGVSANFFTKLGIEKHKPKELNDLPHFPRDQLQAEY
                     TGGDICIQACADDPQVAFHAVRNLVRVARGEIKMKWSQMGFNSFANQDTPRNLFGFKD
                     GTANAESLKDQENTVWVQQEGWLKGGSYLAVRRVKMFLETWDRTHLQSQEETFGRHRD
                     SGAGIGHQHEFDKLDLAKKDEKGNAVIPEVSHAHLANKTGLKILRRSFSYSSGIDDKG
                     QFDSGLLFVSFQQSPEQFIKIQNALGNVDKMNEYITHIGSGLFACFAGVKDENDYLGK
                     ALFDLI"
     gene            complement(5042..5887)
                     /locus_tag="PXF40_001417"
     CDS             complement(5042..5887)
                     /locus_tag="PXF40_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005823485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EfeM/EfeO family lipoprotein"
                     /protein_id="HDL5802750.1"
                     /translation="MFLLKGNFYAFNQTCFCTFALSGFFVATQAAALDLTKETEAYKQ
                     FVVEQIDQLVTDTEKFVGYLNKGDVQKAKKIYPLARMYFERSEPIAESFGDLDPRIDA
                     RLADLAEEGKTEKDWSGFHKIEKVLWQKNTTKGTKATAEQLLKDVKELRAKIPTAEVT
                     PEPMITGAVDLLNEVSTTKVTGEEEIFSKTDLYDFKANIEGAEKIYEIFKTQLEQIDA
                     KLSTEIGSRFAAVNALLAKHNKSKTGYDYVPYNKLSKADIKALAEAVNQLGEPLAQLG
                     VLLNK"
     gene            6050..6286
                     /locus_tag="PXF40_001418"
     CDS             6050..6286
                     /locus_tag="PXF40_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5802751.1"
                     /translation="MSRTTSVTLAEPLSQFVNQMVESGRYGSTNEVISAALKILEAQE
                     QQLIQLRALIDEGLESGVSEETVQSIISKAKRNV"
     gene            6525..8543
                     /gene="uvrB"
                     /locus_tag="PXF40_001419"
     CDS             6525..8543
                     /gene="uvrB"
                     /locus_tag="PXF40_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HDL5802752.1"
                     /translation="MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVT
                     GSGKTFTIANVIAKLNRPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPE
                     AYVPASDTFIEKDASINEQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQM
                     MLHLQVGAMIGQREILSRLAELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVE
                     LFDDEIENLSLFDPLTGHSLGKVPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTY
                     FIKENKLLEEQRIAQRTQFDIEMMNELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPA
                     DGILVIDESHVTVPQIGGMYRGDRARKETLVQYGFRLPSALDNRPLRFEEFERLSPQT
                     IYVSATPGAYELEKNPDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIHKRVAVDER
                     VLVTTLTKKMAEDLTDYLDEHGVRVRYLHSDIDTVERVEIIHDLRMGMFDVLVGINLL
                     REGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYGDRITNSMQKA
                     ITETERRREKQMKYNEEHGITPQALNKKVGELLDIGQSDKPKRGKQAVKKAENSATDY
                     KPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRDKLQHLKAYLLEV"
     gene            8546..8956
                     /locus_tag="PXF40_001420"
     CDS             8546..8956
                     /locus_tag="PXF40_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802753.1"
                     /translation="MISRSLFSKLILFAKIVIFSQLVFMVVIWIAHHIMREYSNPFER
                     FGTLFNNVFLTFIIPMMVSSAVIVYKGYTQKNEDKVFWIYMGFFLIWILGFIYFEPAV
                     YDKSLKISGAGFGAMLSIIICSKLLPKETNKEQL"
     gene            complement(9177..10265)
                     /gene="purK"
                     /locus_tag="PXF40_001421"
     CDS             complement(9177..10265)
                     /gene="purK"
                     /locus_tag="PXF40_001421"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HDL5802754.1"
                     /translation="MQKSAIYPPVYVLGNGQLGRMLRYAGAPLDIEVKPLAFDAPVFD
                     IEPNSIITAEIERWADTPLTQLLGNHPNFVNLNVFGKLADRFTQKSLLDELHLATSKW
                     QLLENAEHWQDIFQHIGEKVVVKRRTGGYDGRGQWIVTQDSIHQITPELFGEVIAEKF
                     IPFEGEISIVGARFRDGSTRFYPISHNLQQNGILRYSVSDVNLPNQALYQQQAEQMLA
                     TVMQKLEYVGVMAMECFVVGDKLLINELAPRVHNSGHWTQLGCAISQFELHLRALLDL
                     PTPALDQIAPSVMVNLIGIEHNKQWLSLPFSQLHWYGKEVRAGRKVGHINLTHTDKNG
                     LIELLEQLRPSLTEDFHSGLDWAINKLK"
     gene            complement(10284..11249)
                     /locus_tag="PXF40_001422"
     CDS             complement(10284..11249)
                     /locus_tag="PXF40_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HDL5802755.1"
                     /translation="MSKKLLILHTGGTISMKEGEDGKVSPSNENPLLAALERLNHPAK
                     LAQESLFNIPSPHINIEHWQQLKMRIEKAVNEENVDGVVITHGTDTLEETSYFLDLAL
                     SVNIPVVITGAMRSSNELGADGLINLQSAILVALNEESRDKGVLVVMNDEIHNAKFVT
                     KTHTTNVATFQTPTFGPCGLVTKESVIFFQKLTTYERYPIQQVTKANVQLLKAYAGMD
                     SFLLEQLAKSKCDGVVIEALGAGNLPPSCLAGIEALVNANIPIVIVSRAFNGITQDVY
                     DYVGGGKQLKQKGIIFTKGLSGQKARIKLMVLLSQTLDKPLSDYF"
     gene            complement(11264..11761)
                     /gene="purE"
                     /locus_tag="PXF40_001423"
     CDS             complement(11264..11761)
                     /gene="purE"
                     /locus_tag="PXF40_001423"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HDL5802756.1"
                     /translation="MPNKAEIAIVMGSKSDWATMSEATQILDQFGLSYHVEVVSAHRT
                     PDKLFSFAETAETNGYKVIIAGAGGAAHLPGMIAAKTIVPVLGVPVKSSMLSGVDSLY
                     SIVQMPKGIPVGTLAIGPAGAANAGLLAAQILAAFNPDIAEKLRIFRQTQTQMVLDNP
                     DPRVE"
     gene            11935..12579
                     /gene="sspA"
                     /locus_tag="PXF40_001424"
     CDS             11935..12579
                     /gene="sspA"
                     /locus_tag="PXF40_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HDL5802757.1"
                     /translation="MTSSINKRSVMTLFSDKNDIYSHQVRIVLAEKGVPYEIENVMLG
                     SISEDLLELNPYGNIPTLVDRELVLFNPRIIMEYLDERFPHPPLMPVYPVSRGQCRLN
                     MYRIEQDWYSQIDIVNKDPESAEGKKALAQLKEDVLALAPIFAAKPYFMSDDFSLVDC
                     YIAPLLWRMQILGVKFSGATAKPINAYMTRVFQRDSFIQSVGGEAPKHLMDDKD"
     gene            12579..12986
                     /locus_tag="PXF40_001425"
     CDS             12579..12986
                     /locus_tag="PXF40_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HDL5802758.1"
                     /translation="MKPLRPYLYNAYYNWIIDSDNTPYLLVNAEFPDVDVPVEFVKEG
                     KIILNISPRSIGQYIVADEYISFSARFQGMLRDIYIPFGAMVAIYAQETGDGIMFQEE
                     AYYTEEAYQARVRAVEQPKKIKAKKTSTLKLVK"
     gene            13183..14142
                     /locus_tag="PXF40_001426"
     CDS             13183..14142
                     /locus_tag="PXF40_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802759.1"
                     /translation="MKFHKTLLVTLLSSLSVAALAQDKIQNVAITAIVEHPALDSIRK
                     GVIEELAREGFVDGKNIKIDYQSAQGSTATAAQIARKFVGDKADIIIPITTPSAQPVV
                     AATRSIPIVFSGVTDPVAAKLVKSWEPSGTNVTGISDHKAMAPQVKLIQTLVPDLKAV
                     GYVYSAGEVNSAIVLEELKQEAQKQGFTIVPVAVQRSADIGTAARSLNGKVQAIYISE
                     DNAVVSAYEALHKAALEAKIPVIAADRDTVQRGAVAAYAVNQYDIGVATGKVAARVLK
                     GEKAGTIPIQEVSKLELSINTKTAKELGITIPEVLIKEAKQTF"
     gene            14222..14482
                     /locus_tag="PXF40_001427"
     CDS             14222..14482
                     /locus_tag="PXF40_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HDL5802760.1"
                     /translation="MGWIAAIIVGAIIGWIASAVMKSEGGLCKNIIIGILGSSLGRWV
                     FGDVLGIGSAYSAGDFNIVGIFFGVLGAALLIFILRKLSIIN"
     gene            complement(14532..15422)
                     /locus_tag="PXF40_001428"
     CDS             complement(14532..15422)
                     /locus_tag="PXF40_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802761.1"
                     /translation="MDKLNAISLFCKVIETQSFTQAAQQAQISLPMASKLVAQLEEHL
                     NVRLLQRTTRKITPTEAGLLYYQQCLPILNELKEADASVSNINSTLQGKITMSVPMDF
                     GSRFIAPYLGKFMEDYPNLALHIEFSDRRVDVIAEGFDLVLRIGSLADSSIVAKKIAD
                     SHLVLVASPDYLARFGEPKGLEALVERDCLLYEYHPQWQFSQQGQKMQIKPQGKIYSN
                     NGYALVQMAKAGLGIINIPKFLIKHELKNGELIPIMPFLTQEPLQISLLYPNRRYLSP
                     KVRILIDFFTQLMQEQKEYI"
     gene            15552..18158
                     /gene="topA"
                     /locus_tag="PXF40_001429"
     CDS             15552..18158
                     /gene="topA"
                     /locus_tag="PXF40_001429"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HDL5802762.1"
                     /translation="MGKSLVIVESPAKAKKINQYLGSNYVVKSSVGHIRDLPKSGSDE
                     KTEKAKPISTKGLTAAEKAKIKAEKERVALVKRMGIDPYNGWKANYQILPDKEKVVSE
                     LKSLAKKADHIYLATDLDREGEAIAWHLREIIGGDDSRFSRVVFNEITKDAIKKAFDD
                     PQPLNIDRVNSQQTRRFLDRVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREI
                     KAFQSEEFWTILANTQINRKKLPLELTTYKGKKFSASNEAEANVAVRALEQSDFIVSN
                     IEAKETSSRAAAPFITSSLQRAASTRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLS
                     REALAMARGYIQDNFGANYLPEKANVYRSKDNAQEAHEAIRPSDVNVKMADLKGMDKD
                     AERLYDLIWRRFLACQMLPARYDSTAVTVSAGDYELKANGRVLRFDGWTKVLPVQGKN
                     PEDQELPAVELHQKLTLDEIVPSQHFTKPPARFNEASLVAELEERKIGRPSTYASIIS
                     TIQERGYVRTENKRFYVEKIGEVVTDRLNESFKDLMNYDFTANMEEVLDQIAEGSKNW
                     KEELNTFFKHFSEELSQAELDELEGGMKPNSLVPTDIDCPTCGRKMAIRTASTGVFLG
                     CTGYALPPKERCKTTMNLIPEAEFFNVLDSDSETKALMARKRCPKCDSAMDSYVIDAE
                     RKLHVCGNNPNCDGHIIEQGSFKIKGYDGPVVECDKCGSDMHLKLGRFGKYMGCTSCD
                     NTRKILKNGEVAPPKEDPIAFPELKCEKADAYFVLRDGASGVFMSAHNFPKVRESRAP
                     KVVELAQYRERLPEKLQYLADAPQQDPEGNEAIIRFSRKEKRQYVTSEKNGKATKWIV
                     DYLDGKWVERKK"
     gene            complement(18208..19146)
                     /gene="yvcK"
                     /locus_tag="PXF40_001430"
     CDS             complement(18208..19146)
                     /gene="yvcK"
                     /locus_tag="PXF40_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HDL5802763.1"
                     /translation="MENTDIIPFKPTRHHYLNQLNAVVALGGGHGLGRLLSALSFLKE
                     RLTGIVATTDNGGSTGRIRSQQGVIAWGDLRNCLNQIIVKPTIASRLFEYRFAGTGEL
                     AGHNLGNLILTALENMQIRPLEGINLVRELLHVRSQLIPMSEIPVHLIAQLHSGESVF
                     GEVQIDSLAETPQHLALDTMVVATPEAISAIQSAELILLGPGSFFTSIMPNLLVAGIA
                     NSIAQSKARVVFIDNIGQEHGPAGQLSLNQRIEWMENCIGQARINAVITTDDAGSELP
                     EHIQILRKNLSANDVYYRHDRNKLSKAIDELLAQNI"
     gene            complement(19160..20236)
                     /locus_tag="PXF40_001431"
     CDS             complement(19160..20236)
                     /locus_tag="PXF40_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5802764.1"
                     /translation="MFQMLQDWYRKKFTDPQIVVLFSILLIGFGIIYFFSDLLMPLLV
                     ALVFAYLLEWPIRFLSSKLKLPRTLSVILVLGGFIALLSFLGVVLLPSLWNQAVTFIQ
                     DLPSMFNLLNAWLQALPEHYPELVDYATLDSIVNTAKSNILSMGESLLTLSINSIISL
                     VGLGIYTFLVPLMVFFLLKDKIVLMRSFSKVLPQNRRLATRVWFEMQQQIANYIRGKF
                     LEILIVGVVTYIIFLFFDLRYPLLLSVAVGISVLVPYIGAVLVSIPVMLIALFQFGLS
                     PDFYYLMLAFIISQLLDGNLLVPFLFSEAVNLHPLTIIIAVLIFGGLWGFWGVFFAIP
                     LATLVKAVLQALPSAQSDAIILEK"
     gene            complement(20267..21022)
                     /locus_tag="PXF40_001432"
     CDS             complement(20267..21022)
                     /locus_tag="PXF40_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5802765.1"
                     /translation="MKKEEVGHHFLARLGKTRLRPGGKLATDWLIANGDFDKNKKVLE
                     VACNMGTTAIQLAQQFECQIVGIDLDEDALEKARKNIKENHVEHLIQVQRANATKLPF
                     DDESFDIVINEAMLTMLPLEAKEKAIREYFRVLKPNGFLLTHDIVIQDKDSDTLLAEL
                     RDAINITVSPLAKADWKSLFQRCGFRNVDTFSGEMSLLSPKGLIHDEGVLGAMKIIGN
                     ALKPENRETFNKMYKLFNDPDKKLGFIAVCSQK"
     gene            21174..21383
                     /locus_tag="PXF40_001433"
     CDS             21174..21383
                     /locus_tag="PXF40_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HDL5802766.1"
                     /translation="MSKQKNDYLHQRGQIKESAVKALVTDPLFRQRVERNRKGKGSYR
                     RQEKHKKTIYGQKETPFKNIRLESF"
     gene            complement(21432..22154)
                     /gene="bioD"
                     /locus_tag="PXF40_001434"
     CDS             complement(21432..22154)
                     /gene="bioD"
                     /locus_tag="PXF40_001434"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HDL5802767.1"
                     /translation="MPSLFITGTDTNVGKTVVTRAIIQTLTKHSFPVIGYKPIACGGD
                     DSLPTEPTQYDYATEDNSDVLTILDSCPTNVSYRDINSYTFIHSSTPVFAALDAVHHI
                     QLEKLNTDLKRLENAYPNVVVEGTYGWLTPINKDYYFADWVMQNNMPVVLVVGIKEGC
                     VNHALLTANEILQRGVKLVSWVANRVNPGLRHYHELIELLTQKINAPLLGQIPYMGHP
                     EHKELSSYIQNPEPLLAYFSKP"
BASE COUNT         6641 a         4336 c         4804 g         6617 t
ORIGIN      
        1 aaaacatctt aactaattga tttataaaaa taatattatc attaggtaag acctccgccc
       61 cttttcgctt ttttgattag gggctttttt tattttagca tttgcaaatt tctaacggaa
      121 attgaccgct tgtattccct cctttctgcc ttactgtgct acaatcagcc caattttttc
      181 taacaaattg aacgaatgag cgataaattc tcttttttct tttacgatta tgaaagtttc
      241 ggcgtgagtc cggcgttaga tcgtccggca caatttgccg gtattcgaac cgatgcggat
      301 tttaatatta tcggtgaacc ggtaatgttt ttttgtaagc aaacgccgga ttatttaccc
      361 agccccgaag cggtgatggt taccgggatt acaccgcaac aatgtaacgc tgaaggtgta
      421 tctgagccgg aatttgcagc ccgaattcac gctgaattta gccgagcgaa tacttgtact
      481 atcggttata acaatattcg ttatgatgat gagatgaccc gttatacctt cttccgcaat
      541 ttttacgatc cttacgaata tagctggaaa aacggaaatt ctcgttggga cttgttagat
      601 ttagtccgtg cctgttatgc gttaagacct gatggtattg aatggccaac agatgaaacc
      661 ggtatgccaa gttttaaatt ggaaaacctc accaaagcca atggcattgc ccatgaaaat
      721 gcacacgatg cgatgtctga tgtgtatgcc accatcgcaa tggcaaaatt aattaagcaa
      781 aaacagccaa agttgttcga ttttttcttt aatttacgca gtaaaaaaga agtagagaag
      841 ttaattgaca ctggtgaaat gacaccgctt gtgcacgttt ccggtatgct gggcaactat
      901 cgaggaaata ccgcttgggt tgtgccactg gcttggcact caactaatca aaatgccgta
      961 attgtgtgtg atttatcggg cgatatgaat ggcttattga ctgaaaatgc agaggtttta
     1021 cgtcagcgtt tatacaccaa acgagatgaa ttagccgaaa atgagttacc tgtgccgtta
     1081 aaattagtgc atattaataa atgcccgatt ttagcaccgg caaaaacctt actgcctgaa
     1141 aatgcagaac gtttaggcat agacagagct ttatgtttgg aaaatttgaa aactttaaaa
     1201 gcacagaaat cgctgattcg ggaaaaagtg attgaaattt ttaatgaaga acgcacgttt
     1261 gagccttcga ccaatgtaga aaccactttg tatgacggct ttttctcgcc tgcggataaa
     1321 aataatatgg cgattttacg cacgctaccg cctgaagatt tagccaacca cggcttgaaa
     1381 tttgaagacc ctcgagtaga ggcgttacta ttccattacc gagcaaggca ctatccacaa
     1441 acactcagtc gagccgagca gatcaaatgg cagaaacatt gcaaccagca aattgaggca
     1501 aaagcagcgc agttcgccca atcgattgac gacttgttcc aacaacatca cgacaacccg
     1561 gaaaaggtaa aattattaga aaatttgacc gcttacgccg agcagatttc gcaacaacaa
     1621 gcggtcattt atcgtcaaaa tgttgcaaaa gatgaaaaat tgctgagcga gcttaacaga
     1681 gtagcggaac agcccctaga taaaaccgaa aagctcaaga tgttaaaaga gttgattaaa
     1741 tgacaatgga taatttaccg ctagaacagc acccgtttga ccctatttta cctgaacaag
     1801 caacggtggt aatggtcggc acttttccac ctacatcgga aaagcgttgt atggaatttc
     1861 attacccgaa ttttcaaaat gatatgtggc gaattatggg caatattttt tatgctgacc
     1921 ctaactattt tcgagttggt gaagaaaaac gctttgatcc gattcggatt gaggcgtttt
     1981 tgcgagaaaa gggcgttgcg ctctgttctt cggcaaaaac agcgattcgt ttaaaaggaa
     2041 acgcttcaga taaagattta aaaattgttg atcctatcga tatggacgaa ctgttgctca
     2101 aattacccaa actgaaatgg ctatttacca caggtggttt ggcaaccgat acgttgctcg
     2161 gtttattgcc ggaaaaacac aaagctccga aaaccaacga atgggtggtc tatccttatt
     2221 ccgccacaag agaactttat ttatatcgcc tgccttcgac gtcgagggct tatccactca
     2281 gcttagccaa caaaaccgaa gcctatcgcc aatttttcag gactgccggc ttaatttaag
     2341 gataaataaa atgaaatatg atttacacgc ccacagtacc gcctctgatg gcgtactttc
     2401 tcccactgaa ttggtacaac gtgcggtaga gcaaggggta acaatgctag ctttaactga
     2461 tcacgatacg atttcgggca ttcaagaagc gaaaaatttt gcccaaaatc aaccgcttga
     2521 gcttatctct ggggtggaaa tttcgatttt atggcaagaa aaaagtattc atcttgcggc
     2581 gttgaatatt gatgaaaaca acgaggagct ggtgaagttt ttggataacc aagcccaatt
     2641 aagggaagag agagcggtcg aaattggtga aaaattagca aaagtcggga ttgcaaatgc
     2701 ctatgagggg gcaaaagcgt tggcaacagg ggaagtaact cgggcacatt atgggcgttt
     2761 tttgtatgaa caaggctatg tccgcaatat tgaacacgcc tttaagcgtt atctgggaat
     2821 ggggaaacct gcctatgtga aaccgagatg gagtagttta gaagacgcgg tgaatgttac
     2881 ccacacctca ggcggtgtga tttcgattgc tcacccgcta cgctataaaa tgactgctcg
     2941 ttggattcgc cgtttaatcg cagatttcaa acaagccgga ggcgatggca ttgaagtatc
     3001 aggctgcgga caaacacctg atcaacggca attacttgcc cgttgggcaa aagagtttga
     3061 tttatatggc tcggtcggtt ctgatttcca ctacccaact ggctggattg agctcggtaa
     3121 aagtttggaa ttaccccaag aatgtaaacc gatttggacg ttattttagt gttatcgggg
     3181 caaataattt gccccgattt tttactattt cactttaact tgcttaaagt ctgccattac
     3241 cacacctagt tcggaaacca gttcactgat ttttgccata tccggctttt cagcgttcag
     3301 attaattcgc attaaaccaa gaatacgctc aaatttgcca taatggggaa gactgatttc
     3361 ccgtactgct ttttcctgtt ttacccaatt cttaccaaac tgataagccg cccatttgat
     3421 tttggcgatt tcttgagttg gcacggtttg agcaagttct gcataaagcg gcgtcatttt
     3481 tgccacaaaa tcctgatgtt tttcagcata accgctaggg ttttgttctt tttcaaacgc
     3541 atagagtttt tagaaaggct ctctaagttt tcagcattgg gtgtttcaat cgcttttttc
     3601 agagcggtct gtacttcaac tccggcgagg gaatcgtgct ggctaatctg ctcaaaatcg
     3661 tgctgtaaag cggtcaaatt ttggctggat tttgcaaatt cccctttttt actctctgcc
     3721 attgcatcgg aaagctgaac aaataagggg ctgacattca ctttggcaag caatcctgta
     3781 ctcgaaaaga gtaacggaat tagcactaat gcttttaatt tcatttcctt ttccctaaat
     3841 taaatcaaac aacgctttgc caaggtagtc attttcatct ttcacaccgg caaaacaggc
     3901 aaataaacca ctgccgatat gagtgatgta ttcattcatt ttatccacat tgccgagagc
     3961 gttctggatt ttgataaatt gctccggact ttgttggaaa gagacaaaca acaaccctga
     4021 atcaaattgc cctttatcat caataccgct tgaataggag aatgaacggc gtaggatttt
     4081 cagccccgtt ttattggcaa gatgagcgtg tgaaacttcc ggaattactg cattgccttt
     4141 ttcgtctttt ttggctaaat ctaatttatc aaattcgtgc tgatgcccga ttccggctcc
     4201 ggaatcacgg tgacgaccga aggtttcttc ttgggattgg agatgggtgc gatcccaagt
     4261 ttccaagaac attttaacac ggcgaacggc taaataagaa ccgcctttga gccagccctc
     4321 ttgttgcacc cataccgtat tttcctgatc ttttaaactt tctgcgttgg cagtgccgtc
     4381 tttaaaaccg aataagttac gaggtgtgtc ttgattggca aaggagttaa accccatttg
     4441 cgaccatttc attttgattt caccacgggc aacacgcacc aaattacgca cagcgtggaa
     4501 agccacttgc ggatcgtctg cacaggcttg aatgcaaata tcgccaccgg tgtattctgc
     4561 ttgtagttga tcacgaggga aatgcggtaa atcattcagt tctttcggct tatgtttttc
     4621 aatgccgagc tttgtaaaga aattggcact gacgccaaaa gtaagagtga gattctgtgc
     4681 cgaaaggcta tctgcctcac cggtatccgc cggtggaaca taagcattag cactataagg
     4741 tttcacattt ttgccaagcg tgaggttacg gctatattcc gtccagtttt gaaacaatgt
     4801 ttttactttg gcaatgtcag tggtgtctaa atccagcact aaaaagtaga tatgtttttg
     4861 tgcagggcta acaataccag cttgatgttt gccgtaaaag tcgtattgat tttgagattt
     4921 ttcagatatt tgtcgtgatt ccaaagcgaa agcaggagca gacaataagc ctgctcctac
     4981 taatgcggta tgttttaaaa aatcacggcg agaagtggtt tctgccatca tttttgctcc
     5041 actatttatt taaaagtacg ccaagttgag ctaacggctc gcctaattgg tttacagcct
     5101 ctgctaacgc tttaatatcc gcttttgaca gtttgttata aggcacataa tcataaccgg
     5161 ttttagattt attgtgtttt gctaacagcg cattgacagc cgcaaaacga gagccgattt
     5221 ctgttgagag tttggcatca atttgctcta attgcgtttt aaaaatctca tagatttttt
     5281 ctgcaccttc aatattggct ttaaaatcgt aaaggtcggt tttagagaaa atttcttctt
     5341 caccggttac tttagtagta gaaacttcgt ttaataaatc taccgcaccg gtaatcatcg
     5401 gctcaggggt aacttctgca gtgggaattt tcgcacgcag ctcttttaca tcttttaata
     5461 attgttctgc cgttgctttt gtgcctttag tggtgttttt ctgccacaat actttctcga
     5521 ttttatggaa acctgaccaa tctttctcgg ttttaccttc ttcggctaaa tctgccagac
     5581 gggcatcaat acgagggtct aaatcgccaa aactttctgc aatcggttca gaacgttcaa
     5641 aatacattct tgcaagcggg taaattttct tcgctttttg cacatcgcct ttgtttaagt
     5701 agccgacaaa tttttccgta tcggtaacca gttggtcaat ctgttctacc acaaattgtt
     5761 tataagcctc ggtttcctta gttaagtcta aagctgccgc ttgagtagcc acaaaaaagc
     5821 cagaaagtgc aaaagtgcaa aagcaagttt ggttaaacgc atagaaattt ccttttaata
     5881 aaaatattgc gacataatat ccttattgcg aattattcgc aaaaaataat gctgattttg
     5941 tgatgtaaat cacattttgt tttgcaaatt attgctaaaa atagaccgct tgcttatcta
     6001 aattagagcc attacaatct gctcaataat caataagata ggaatagtaa tgagtagaac
     6061 aaccagcgta actttagctg agccattaag ccaatttgtg aaccaaatgg ttgaaagtgg
     6121 gcgttatggt tcgaccaacg aggtcatcag tgccgcatta aaaatattgg aagcacaaga
     6181 acagcaacta attcagctaa gagccttaat tgatgaaggc ttagaaagcg gtgtttctga
     6241 ggaaaccgtt caatctatta tcagcaaggc aaaacgtaat gtataaactt tctgttaggg
     6301 cagagcgaga tttagcgtta ctttattcgc cctttgttac gctgtcatta ccaccgctca
     6361 cattctattt attataaacc aatcccaaaa ggtatcttta ttgttagggt gttagatcca
     6421 agaatggatc aatataagca gttacaataa atttgcaaaa atcccgataa aaacgaccgc
     6481 ttgcttgtgc taaaataaac cgatttttta agacaggatt ttctatgagc aagcaaggca
     6541 aaccctttat cctccattct cctttcaagc cctccggcga ccaaccaagt gcgattgcca
     6601 aattgaccga aggcttaaat gacggcttgg cacatcaaac cttacttggc gtaaccggct
     6661 cggggaaaac ctttaccatt gctaatgtga ttgccaagct caatcgcccg gcgatggtgc
     6721 ttgccccgaa taaaaccctt gccgcccagc tttatgccga gatgaaagcg ttctttccgg
     6781 aaaatgcggt ggagtatttc gtctcttact atgattacta ccagcccgaa gcctatgtgc
     6841 cggcaagcga tacctttatc gagaaagatg cctctatcaa tgagcagatc gagcaaatgc
     6901 gactttccgc aaccaaatcc tttttggaac gccgagatac gattgtagtg gcgtccgttt
     6961 ctgccattta cggcttgggt gatgtggacg cttatatgca gatgatgttg catttgcaag
     7021 tgggggcgat gattgggcag cgtgaaattc tctctcgcct tgccgaattg caatatactc
     7081 gcaacgatca ggcgttccaa cgttcgactt tccgagtgcg gggcgatgtg attgatattt
     7141 accctgccga aagcgatgaa gtagcgttaa gggtagagct gtttgacgat gaaatcgaaa
     7201 atctgtcgct gtttgatccg cttacagggc atagcttggg caaggtgcct cgctatacca
     7261 tttacccgaa aactcactat gtgacccctc gggaacggat tttggaggca atcgagcaaa
     7321 ttaaggtcga gcttgccgac cgtcgcacct atttcatcaa agagaataaa ttgctggaag
     7381 agcagcggat cgcccaacgt acgcagtttg atattgagat gatgaacgag ctgggctact
     7441 gttcgggcat tgaaaactac tcacgctatc tctcgggcag aaaagagggc gaagcccctc
     7501 cgaccctgtt tgattatatg ccggcggacg gtattttggt gattgatgaa agccacgtta
     7561 ctgtgccaca aattggcgga atgtatcgag gcgaccgagc gagaaaagaa acattggtgc
     7621 aatacggttt ccgtctgccg tctgcactgg ataaccgccc gttgagattt gaagagtttg
     7681 aacgtctttc accacagacg atttacgttt ctgccacacc gggggcgtat gaattggaga
     7741 aaaatcccga tgtggtggat caagtagttc gtccaaccgg cttgctcgat ccgattatcg
     7801 aagttcgccc cgttgctacg caggtggacg atttactgtc tgaaattcac aaacgagtgg
     7861 cggtggacga acgggtgctg gtgacaacac tcaccaaaaa aatggcggaa gatctcaccg
     7921 attatttgga cgaacatggc gtacgagttc gttatctaca tagcgacatt gacacggtgg
     7981 aacgggtcga aattatccac gatttacgaa tgggaatgtt tgatgtgctg gtggggatca
     8041 acttattgcg tgagggctta gatatgcccg aagtgtcgct ggttgccatt cttgatgcgg
     8101 ataaagaggg atttttacgt tccgaacgct cgttaattca gaccatcgga cgtgccgccc
     8161 gaaacctcaa cggaaaagcg attttatacg gcgaccgcat taccaactca atgcaaaaag
     8221 caattactga gaccgaacgc cgccgtgaaa agcagatgaa atacaacgaa gaacacggca
     8281 tcacgccaca agcgttgaac aaaaaagtgg gtgaattgct cgacatcgga caatccgaca
     8341 agccaaaacg gggcaaacaa gcggtcaaaa aagccgaaaa ttctgcaacc gactacaagc
     8401 cgaaatcccg taaagaactg gaaaaagagc ttaaaacgct ggaacaacaa atgcgtgatt
     8461 ttgcgaaaga tctggaattt gaaaaagcgg ctgcggtaag ggataagttg cagcatttaa
     8521 aggcgtattt gttggaggtt taaatatgat ttctcgttca ttattttcaa aattaatctt
     8581 atttgccaaa attgttattt tctctcaact tgtttttatg gtggttatct ggattgccca
     8641 ccatattatg cgggagtaca gtaatccgtt tgaacgattt ggtaccctgt tcaataatgt
     8701 gtttttgact tttattattc cgatgatggt aagtagtgcg gttattgttt ataaaggtta
     8761 tacccagaaa aatgaagata aagtgttttg gatttatatg gggttctttt taatttggat
     8821 tttgggattt atttattttg agccggcagt ttatgataaa tcactgaaga tttcaggtgc
     8881 aggatttggg gctatgctct ctattatcat ttgctcgaag ttattgccta aggaaacaaa
     8941 taaagagcag ctctaagatt cttgtgaaga aatctgtttt ctcggaggaa gaaaatgctt
     9001 tttgatagcc atatccaccc tgaggggttt tcagatcaag atgatgaccg gaagtagcca
     9061 ttatgttgaa ttattttgca aattttagca ctaagtcgac cgcttgtttg gtacgagcga
     9121 ggaagctcgc accatcgggt aaacagattt gcaaaaaagt tacaaaatcc gaccgcttac
     9181 ttgagcttat tgattgccca atctaatccc gaatggaaat cttccgttag gctcggtctg
     9241 agttgttcca gtagttcaat taagccgttt ttatcggtgt gagtgaggtt gatatgccca
     9301 acttttctac cagctcggac ttctttgcca taccaatgta gttggctaaa tgggaggctt
     9361 agccactgct tgttatgttc aatgcctatt aaattaacca tcacgcttgg ggcaatttgg
     9421 tcgagtgctg gcgtaggtag atctaataat gcccgtaaat gtaactcaaa ttggctaatg
     9481 gcacagccga gttgtgtcca gtgtccgctg ttatgcactc gaggggcaag ctcgttgatg
     9541 agtagcttgt cgcccacaac aaagcattcc attgccatta cgccgacata ctctaatttt
     9601 tgcattaccg tagcgagcat ctgttcggct tgctgctggt agagggcttg gttcggtaaa
     9661 ttcacatcgg agacggagta acgtagaatg ccgttttgtt gtaaattgtg agaaataggg
     9721 tagaaacggg ttgagccgtc acggaatctc gccccaacaa tggaaatttc cccctcaaac
     9781 gggataaatt tttcggcaat cacttcgcca aataattcag gtgtaatttg atgaatcgag
     9841 tcttgcgtta caatccattg cccacgtccg tcatatcctc cggttcggcg tttaaccact
     9901 actttttcgc caatatgctg aaaaatatct tgccaatgtt cggcattttc tagcagttgc
     9961 cattttgaag tcgcaagatg gagttcatca agtagtgatt tttgcgtaaa acgatcggct
    10021 aacttcccaa aaacattcag gttcacaaaa ttcgggtggt taccgagtaa ttgcgttaaa
    10081 ggcgtatctg cccaacgttc gatttctgcg gtaataatgc tgtttggctc aatatcaaac
    10141 acaggggcat cgaaagccag cggtttgact tcaatatcaa gtggtgctcc ggcgtagcgt
    10201 agcattctcc cgagctggcc gttgcctaat acatacacag gtgggtagat tgcacttttt
    10261 tgcatcgtgg tattctcaat gggttagaaa tagtctgata gtggtttgtc taaggtttgg
    10321 ctgagtaaga ccataagttt aatgcgagct ttttgcccac ttaagccttt ggtaaaaata
    10381 atgccttttt gctttaactg ttttccaccg cctacataat catagacatc ttgggtaata
    10441 ccattgaatg cccgagaaac aattacaatt ggaatattgg cattcactaa agcctcaata
    10501 ccagccagac aactaggggg taaattacct gcacccaatg cctcaatcac aacaccatcg
    10561 catttgcttt tcgctaattg ttccagcaga aaactatcca ttccggcgta tgctttcagt
    10621 agttgcacgt tagctttagt tacttgttga attggataac gttcgtaagt ggtcaatttt
    10681 tggaaaaaaa tgacagattc tttcgttact aagccacaag gcccaaaggt tggggtttgg
    10741 aaagtcgcca cattagtggt gtgggttttg gtcacaaatt tagcattgtg gatttcatca
    10801 ttcatcacca ctaacacgcc tttatctcgg ctttcttcat ttaacgccac taaaatcgca
    10861 ctttgtagat tgattaagcc atcagcaccc agttcgttac tggaacgcat tgctccggta
    10921 attactaccg gtatatttac gctgagggct aaatccagaa aataggaggt ttcttccaag
    10981 gtatctgtgc cgtgggtgat tactacgcca tcgacattct cctcattcac tgccttttca
    11041 atccgcattt ttaactgttg ccaatgctcg atattgatat gcggagaggg aatattaaat
    11101 aacgattctt gcgccaattt tgctgggtgg tttaaacgtt ctaaggcagc caagagagga
    11161 ttttcattgg aaggggagac cttaccgtct tccccttctt tcattgaaat agtaccacca
    11221 gtgtggagga ttaataattt tttagacatc ttttatacaa tagttattca acacgaggat
    11281 caggattatc taataccatc tgagtttggg tttgacggaa aatacgcagt ttctctgcaa
    11341 tatcagggtt aaaggctgct aaaatttgag cggctaataa gcctgcattt gctgcacctg
    11401 ccggcccgat tgcgagcgta ccgaccggaa tacctttcgg catttgcaca atcgaataga
    11461 ggctatctac accacttaac attgagcttt ttaccggcac acctaacacc ggcacaatgg
    11521 ttttagcagc gatcattccg ggcaagtgag ctgcaccgcc ggctccggca ataatcactt
    11581 tatagccgtt agtctctgca gtttcagcaa aagaaaagag tttgtccggt gtgcggtgtg
    11641 ctgagacgac ttcaacgtga tagctcaaac cgaactggtc taatatttgg gttgcttcag
    11701 acattgtagc ccaatcactc ttagatccca ttacgatcgc aatttcagct ttatttggca
    11761 ttttaaatcc ttatgatact aatgtaaaac agtgtaatca tagcatacaa agcaaacgtt
    11821 tgcgtagcta tttaagaagt gaaaagcaat ttttagggct gttatctgct ggttaaaata
    11881 tgatataatc gacaaccatt ttatttttta taaatttaat catcggagat ataaatgacg
    11941 agtagtataa acaaacgttc ggtaatgact cttttttcgg ataaaaatga tatttacagc
    12001 caccaagtgc gtattgtgtt agcagaaaaa ggggtgcctt atgaaataga gaacgttatg
    12061 ctaggcagta tttctgaaga tttattagaa ttgaatcctt acggtaatat tcctacattg
    12121 gttgatcgtg aattagtgct gtttaaccct cgtattatta tggaatattt agatgagcgt
    12181 ttccctcacc caccattaat gccggtttac cctgtttctc gtggtcagtg ccgtttaaat
    12241 atgtatcgta ttgaacaaga ttggtattcg caaattgata ttgtgaataa agatcctgaa
    12301 tcagcggaag gcaagaaagc gttagcacag cttaaagaag atgtattggc attagcgcct
    12361 atttttgccg ctaaacctta ttttatgagc gatgatttca gcttggttga ttgctatatt
    12421 gcaccgttat tatggcgtat gcaaatctta ggcgttaaat tcagcggtgc aacggcaaaa
    12481 ccaattaatg cgtatatgac ccgtgtattc caacgtgata gttttatcca gtctgttggc
    12541 ggcgaagcgc caaaacattt aatggacgat aaagactaat gaaaccatta agaccttatc
    12601 tttataatgc ctactataac tggattattg atagcgataa cacgccttac ttattagtga
    12661 atgcagaatt tccagacgta gatgtgccgg tagagtttgt caaagaaggg aagattattt
    12721 taaatatttc gcctcgttcc atcgggcagt atattgtggc tgatgaatac attagcttta
    12781 gcgctcgttt tcagggaatg ttaagagata tttatattcc ttttggggca atggtggcga
    12841 tttatgcgca agaaaccggt gatggtatta tgttccaaga agaagcctac tacactgaag
    12901 aggcttatca agctcgagtt agagcagtag agcagcctaa aaaaatcaag gcgaagaaaa
    12961 catctacctt aaagttggtg aaataagaga tctatttcat caaaacacat tacaagcggt
    13021 taaatttttc tgattatttg caaatatcag tcaaaattta accgcttgtt tgttttgtga
    13081 cggaaataat caaattccac ttgcactccg actaaaaatt gcttatcttt gttttgtgtt
    13141 tgtactgttg tgatagtaca gtaatgatct taaggagaga aaatgaaatt ccataaaacc
    13201 ttattagtga ctttgttaag ttcactttct gtagcggcat tagctcaaga taaaattcaa
    13261 aatgtagcaa ttacagcgat tgtggaacac cctgcattag attcaattcg taaaggtgtg
    13321 attgaagaat tagcccgaga agggtttgtt gatggtaaaa acattaaaat cgactatcag
    13381 tctgcacagg gtagtactgc aacagcagca caaattgcgc gtaaatttgt tggggataaa
    13441 gcagatatta ttatcccgat caccacacct tcggcacaac ctgttgttgc tgcaacacgt
    13501 tctatcccaa ttgtgttttc aggcgtgaca gacccggttg ctgcaaaatt agtaaaatcg
    13561 tgggagccaa gtggcactaa cgtgacgggg atttcagacc acaaagcgat ggctccacaa
    13621 gtgaaattaa ttcaaacatt agtaccggat ttgaaagctg ttggttatgt gtatagtgca
    13681 ggtgaagtta attctgcgat tgtgttagaa gagttaaaac aagaggctca aaaacagggc
    13741 tttactatag tgccggttgc tgttcaacgc agtgccgata ttggcactgc tgctcgcagc
    13801 ctaaacggaa aagtgcaggc tatttatatt tctgaagata atgcagttgt ttcggcttat
    13861 gaagccttac ataaagcggc tttagaagca aaaattccgg tgattgctgc tgaccgtgat
    13921 acagtacaac gtggtgcagt ggcagcttat gcggttaatc aatatgatat tggtgtggca
    13981 accggtaaag ttgctgctcg tgtattaaaa ggggaaaaag caggtacaat tccaatccaa
    14041 gaagtcagca aattagagct ttcaattaat actaaaacgg caaaagaatt gggcattact
    14101 ataccagagg tattaatcaa agaagctaaa caaacttttt agtgtaaaaa ataaaaattt
    14161 gttttatttg tcataatctt gtagagtaaa aattcatttc aactcagcta aggagaatat
    14221 tatgggatgg attgctgcaa ttattgttgg cgctataatt ggttggatag cttcggctgt
    14281 aatgaaaagt gaaggcggac tttgcaaaaa tattattatt ggtattttgg gttcgtcact
    14341 tggacgctgg gtatttggtg atgtattagg tattggttcc gcttatagtg ccggagactt
    14401 taatatagtc ggtatctttt ttggtgtatt aggggcagct cttttgattt tcattttgag
    14461 aaaattaagc ataattaact aatttcgtat ttcagaaagg aagcagttgt tttataactg
    14521 cttctttttt gttaaatata ctctttttgc tcttgcatca gttgtgtgaa aaaatcaatt
    14581 aggattcgca ctttaggaga gagataacga cggtttggat agagtaagct gatttgtaaa
    14641 ggttcctgtg tcaaaaaagg cataatagga atcaactctc cgttttttag ctcgtgtttt
    14701 attaaaaact ttggaatgtt aatgatgccc aaaccagctt ttgccatttg tactaacgca
    14761 taaccattgt tactgtaaat tttaccttgt ggtttaattt gcattttttg tccttgttga
    14821 gaaaattgcc attgaggatg gtattcatag agtaggcagt ctcgttccac taatgcttct
    14881 aagcctttag gttcgccaaa tcgagctaaa taatctggag aagcaactaa aaccaaatgg
    14941 gaatctgcaa tttttttcgc tacaatggaa ctatctgcaa ggctaccaat acgcagcacc
    15001 aaatcaaagc cttctgcaat cacatctacc cgacggtcac taaattcaat atgaagggct
    15061 aaattagggt aatcttccat aaatttccca aggtaagggg caatgaagcg agagccaaaa
    15121 tccattggta cagacattgt tattttccct tgtagcgttg agttaatatt acttacgctg
    15181 gcatcggcct cttttagttc atttaaaata ggcaagcatt gctgatagta gagcaaccct
    15241 gcctcagttg gcgtaatttt tcgagtggtt cgttgtagta aacgcacatt gagatgttct
    15301 tctaactgag ccaccaattt acttgccatg ggtaacgaaa tttgagcttg ttgtgctgct
    15361 tgagtgaaac tttgggtttc aattacttta caaaataaac tgattgcgtt tagtttatcc
    15421 attttctctc ttctttatat tgtaatttgt gttaaggctt gctatcgtaa aaatagtgtc
    15481 taaaaaaatc aacttaaaaa gaaataattt caaacaattt aaaataatta ttaaaaatta
    15541 ggtaataaat tatgggaaaa tcactagtta ttgtggagtc tccggctaag gcaaaaaaaa
    15601 ttaaccaata tcttggtagt aattatgtgg tgaaatcgag tgtggggcat attcgtgatt
    15661 taccgaaaag tggtagtgat gaaaaaacgg aaaaagcgaa accgatttca accaaagggc
    15721 tgaccgctgc cgaaaaagct aaaatcaaag cagaaaaaga gcgtgttgca ttggttaaac
    15781 gtatgggtat cgacccctat aatggctgga aagctaacta tcagattttg ccggataaag
    15841 agaaagtggt ttccgagcta aaatcgttgg caaagaaagc agatcatatc tatctggcaa
    15901 ccgacttgga tagagaaggg gaggcgattg cgtggcattt gcgtgaaatc attggtggtg
    15961 atgacagccg ttttagccga gtggtattta atgaaatcac caaagatgcg atcaaaaagg
    16021 cttttgacga tccgcaaccg ctcaatattg accgtgtaaa ttcccagcaa acccgccgct
    16081 ttttagaccg tgtagtgggc tttatggtgt cgccattatt atggaaaaaa gtagctcgtg
    16141 gtttatcggc agggcgtgtg caatcggttg ccgtaaaatt actggttgag cgtgagcgtg
    16201 aaatcaaggc gttccaaagc gaggagtttt ggactattct tgccaatacg caaattaatc
    16261 gtaaaaaatt accgcttgaa ttaactactt ataaaggtaa aaaattctcg gcaagcaatg
    16321 aggctgaagc aaatgttgca gtgcgtgctt tggagcagag cgattttatt gtttctaata
    16381 ttgaagccaa agaaaccagc tctcgagctg ctgcaccatt tattacctca tcgttacaac
    16441 gtgccgctag cactcgttta ggttttgggg ttaaaaagac gatgatgtta gcccaacggt
    16501 tatatgaagc gggttacatc acctatatgc gtactgattc aaccaacctt agccgtgaag
    16561 cattagcaat ggctcgaggt tatattcagg ataatttcgg ggcgaattat ttgccggaaa
    16621 aagcaaatgt gtatcgcagt aaagataatg cccaagaagc tcacgaagcc attcgcccgt
    16681 cggatgtgaa tgtcaaaatg gcggatttaa aaggaatgga taaagatgcc gagcgtttat
    16741 acgatttaat ttggcgtcgt ttcttggcgt gtcaaatgtt gcctgctcgt tatgattcta
    16801 ccgcagtcac agtgtctgcc ggagactatg aactcaaagc aaacgggcgt gtactgcgtt
    16861 ttgacggctg gacgaaagta ctgccggtgc aaggcaaaaa tccggaagat caggaattac
    16921 cggcggttga actgcatcaa aaattaacgc ttgatgaaat tgtgccaagt cagcatttta
    16981 ctaaaccgcc tgcacgtttt aatgaggcgt ctttggttgc tgagttagaa gagcgaaaaa
    17041 ttggccgccc ttcaacctat gcttcaatta tttcgacgat tcaagaacgt ggctatgttc
    17101 gcaccgaaaa caagcgtttt tatgtggaaa aaatcggtga agtagtgacg gatcgcctca
    17161 acgaatcatt caaagattta atgaattatg atttcactgc caatatggaa gaggtgctcg
    17221 accaaattgc agaggggtct aaaaattgga aagaagagtt gaatactttc tttaaacatt
    17281 tctctgaaga gttgagccaa gcagaattag atgaacttga aggcggaatg aaaccaaaca
    17341 gccttgtgcc aaccgatatt gattgcccga cttgtggacg aaaaatggca attcgcaccg
    17401 cttccacagg ggtattttta ggttgcaccg gctatgcttt accgccaaaa gagcgttgca
    17461 aaacgacaat gaatttaatt ccagaggcgg aatttttcaa tgtgttagat tcggattctg
    17521 aaaccaaagc cctaatggct cgcaagcgtt gcccgaaatg cgattcggca atggatagtt
    17581 atgtgattga tgctgaacgt aaattacacg tttgtggtaa taatccaaat tgtgatggtc
    17641 atattattga gcaaggttcc ttcaaaatta aaggctatga cggacctgta gtggaatgcg
    17701 ataaatgcgg ttcagatatg cacttaaaac tgggtcgttt cggcaaatat atgggctgca
    17761 caagctgcga taacacccgt aaaattctga aaaacgggga agttgctccg ccaaaagaag
    17821 atcctattgc ttttcctgaa ttaaaatgtg aaaaagccga tgcctatttt gtattaagag
    17881 acggagcaag tggggtgttt atgtcagctc ataacttccc gaaagtgcgt gaaagccgtg
    17941 caccaaaagt ggtagagtta gctcaatatc gtgaacgttt gccggagaaa ttgcagtatc
    18001 ttgccgatgc tccgcagcaa gatccggaag gaaacgaggc aattatccgt tttagtcgta
    18061 aagagaaacg ccaatatgtg acttctgaga aaaacggcaa agccaccaaa tggattgttg
    18121 attatctaga cggtaaatgg gttgagcgta agaaataaag cttaaaagac aagcggtaaa
    18181 attttctaaa aattttaccg cttgctttta gatgttctga gcgagtagtt catcaattgc
    18241 tttacttaat ttattgcgat cgtgtcggta ataaacgtca ttcgcagata agttttttcg
    18301 caagatttga atatgttcgg gaagttcaga accggcatca tcagtcgtaa ttaccgcatt
    18361 aattctagcc tgtccgatac agttctccat ccattcaatt cgctgattaa gtgatagttg
    18421 cccagctggg ccatgttctt gtccgatatt gtcaataaat actactcggg ctttgctttg
    18481 agcaatagag tttgctatgc ctgccaccag caaattcggc ataatactgg taaaaaagct
    18541 acctgggcct agcagtatta actcagcact ttgaatagct gaaatggctt ctggtgtagc
    18601 aacaaccata gtatctaacg ctaaatgttg tggtgtttct gctaaagaat caatttgcac
    18661 ttcaccaaat actgattcgc ctgaatgcaa ctgtgcaatt aaatgcaccg gtatttcaga
    18721 cattgggata agttgcgatc ttacgtgcaa taattctcgc accaaattaa tcccttctag
    18781 cggtcggatt tgcatatttt caagggcggt gagaattaaa ttgcctagat tatgtccagc
    18841 gagttcgcct gtgccagcaa aacgatactc aaacaaccga gaagctatcg ttggtttaac
    18901 gataatttga tttaaacagt tgcgtaaatc tccccaagca atcacccctt gttgtgaacg
    18961 tattctaccg gttgagcctc cattatcggt agtggcaaca atgccggtaa gccgttcctt
    19021 taaaaaagag agcgcggaga gcaatcgacc taagccgtgg cccccaccta gtgcaacaac
    19081 tgcattgagt tggtttaaat agtgatgtcg ggtaggttta aaaggaataa tatctgtatt
    19141 ttccatcttg ggatttcgtt tatttttcta aaataatggc atctgactgg gctgaaggca
    19201 atgcttgtaa tacagcttta accaaagtcg ctaaaggaat cgcaaaaaac actccccaaa
    19261 agccccataa accaccaaag atgagtacgg caataataat tgtcagaggg tgtagattta
    19321 ctgcttcaga aaataaaaag ggtacgagta aatttccgtc tagcaactga ctaataataa
    19381 atgcgagcat taaatagtag aaatccggcg ataacccgaa ctggaataga gcaattaaca
    19441 ttaccggaat gctgactaaa accgcaccga tgtagggaac taacactgaa atccctaccg
    19501 ctacagaaag tagtaacgga tagcgtaaat caaaaaagag gaaaataata taagtgacaa
    19561 ccccaacaat tagaatttct aaaaatttac ctcgaatata gttggcaatt tgttgttgca
    19621 tttcaaacca tactcgtgtt gcaagtcgac ggttttgcgg taatacttta ctaaaagaac
    19681 gcattaaaac gattttatct ttcagtaaga aaaagaccat gagtgggact aagaaggtgt
    19741 aaatgcctaa gccaactaag ctgatgatag agttaatcga gagtgttaga agtgattctc
    19801 ccatactcaa aatattactt ttagcggtat tcacaatgga atctagggtc gcataatcta
    19861 ctaattcagg gtaatgctcc ggtagggctt gtaaccaagc attgagcaga ttaaacatcg
    19921 aaggtaaatc ttgaataaag gtaactgctt gattccaaag gctgggtagt agtactacgc
    19981 ctaaaaaaga taataaagcg atgaaacctc ctagtactag aatgacactc aaagttcgag
    20041 gtaatttgag tttgctcgac aaaaaacgga ttggccattc caataaatag gcaaacacaa
    20101 gtgcaaccag aaggggcata agcagatcgc taaaaaaata gataataccg aaaccgatca
    20161 atagaatact aaacagcaca actatttgcg ggtcggtaaa tttttttcga taccaatctt
    20221 gcaacatttg aaacatatgg attgccttta aattatgcga tgaaaattat ttctggctac
    20281 agactgcaat gaaccctagc tttttgtccg ggtcattaaa tagtttgtac attttattaa
    20341 aggtttcgcg attttctggt tttaatgcat tgccgataat tttcatggcg cctaaaacac
    20401 cttcatcatg aatcagacct ttaggggaaa gtagagacat ttctccggaa aaggtatcaa
    20461 cattacggaa accacaacgt tggaataatg atttccagtc tgctttagca agtggagaga
    20521 cagtgatatt gattgcatca cgcaactcgg ctaataaagt atcggagtct ttatcttgga
    20581 taacaatatc gtgcgttaat aaaaagccat ttggttttaa tacacgaaaa tattcacgta
    20641 ttgccttttc tttcgcttct agaggaagca ttgtcagcat ggcttcatta attacaatat
    20701 caaaactttc gtcgtcaaat ggcagttttg ttgcgttggc gcgctgtact tgaattaaat
    20761 gctcaacatg gttttctttg atatttttac gtgctttttc aagcgcatct tcgtctaaat
    20821 caataccaac aatttggcat tcaaattgtt gagctaattg gattgcagta gtccccatgt
    20881 tacaggcaac ttcgagcact tttttatttt tatcaaaatc cccgtttgca attaaccaat
    20941 cagttgctaa tttccccccg gggcgtaaac gagttttgcc taaacgagct aaaaaatgat
    21001 gaccaacttc ttcttttttc ataaaaacct ctggatttgc aaaatacgtt aaatatatga
    21061 ccgcttgtat tgtgatctat gttcgttatt atactcaatt ttttcatttt cttatataca
    21121 acatcaacag attttgccag aatacaacct cattttgata tgaggaaaat agaatgagta
    21181 agcaaaagaa tgattacctc caccagcgag gtcaaattaa agaaagtgca gtaaaagcat
    21241 tagtgactga tccacttttt agacaacgtg tagaaagaaa tcgtaaaggg aaagggagct
    21301 atcgcagaca agaaaaacac aaaaaaacta tctatgggca aaaagaaacc ccatttaaaa
    21361 atattcggtt agagtctttt taaatggggt tttatttgta gcttattgta gttttataag
    21421 cctgataaac actatggttt actgaaatag gccaacaacg gttctggatt ttgaatataa
    21481 gaagaaagtt ctttatgctc tgggtgaccc atatagggaa tttgcccaag taaaggcgca
    21541 ttaatttttt gtgtcagtag ttcaattaat tcgtgataat gccgtagccc tggatttact
    21601 ctgtttgcga cccaacttac taattttaca ccacgctgca aaatttcatt cgcagtaagt
    21661 agtgcatggt taacacaacc ttccttaatt cccaccacta aaacaaccgg catattgttt
    21721 tgcattaccc aatcagcaaa atagtaatcc ttgttaatag gagttagcca gccataggtt
    21781 ccttctacga caacatttgg ataggcattt tctagtcgtt ttaaatctgt gtttaatttt
    21841 tccagttgaa tatgatgaac tgcatctaaa gctgcaaata caggggtact ggaatgaata
    21901 aaagtatagc tattaatatc acgatagcta acattagttg gacagctatc tagtatggtt
    21961 aatacgtctg aattatcttc agtagcataa tcatattgag taggttctgt gggtaatgaa
    22021 tcatcaccgc cacaagcaat gggtttatag ccaattacag gaaaactatg ttttgtaagt
    22081 gtctgtatga tggctcgggt aaccacagtt ttccctacgt tggtgtctgt tccggtaata
    22141 aataatgagg gcataaatgg ctcctttcga aaatatggct ggtagtttaa ccaaaaatag
    22201 atcaatttat tctgtctttg atcaaatttc cgtcataaat tccttgtttt attgctgaac
    22261 aggcaattaa tggactattc caatcgtatt ggctggtaac taaatcgatt tttaggtttg
    22321 tttgtaacaa atttttatgc aatttttctg aaatttgcgt aaataacggc tcttttattt
    22381 tgatcaatgg cgagttta
//
LOCUS       DANMCL010000044        21096 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.044, whole genome shotgun sequence.
ACCESSION   DANMCL010000044 DANMCL010000000
VERSION     DANMCL010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21096
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.044"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..288
                     /locus_tag="PXF40_001435"
     CDS             <1..288
                     /locus_tag="PXF40_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5802768.1"
                     /translation="ANTIQLKTKTKFISSMSELLKNMVLNHQGIAWLPEYSISEELHN
                     KKVIILDKNELVIPIKSYIYRMNTRLNNAAERFWNNLQNIQFINEDILNKP"
     gene            complement(373..1722)
                     /locus_tag="PXF40_001436"
     CDS             complement(373..1722)
                     /locus_tag="PXF40_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5802769.1"
                     /translation="MLLFIMFAAIILLLVLIMKFKVHAFVALIIVSLLTALAAGIPVD
                     KILPTLLNGFGSTLASVALLVGLGAMIGRLLEITGGAKVLADTLINKFGKERAPFALG
                     VASLLFGFPIFFDAGLVVMLPIIFSVAKQFGGSVLRYAFPSAGAFAVMHAFLPPHPGP
                     VASGDLLGVNMGLLVLVGLVCAIPTWYIGTYLFSQFISKRIHVDLPKAFLNGLSANEM
                     AVQNPPSFGKVLTVLVLPIILILFDTGLNTLSVAKVIDGSEMWVQSLRLIGKTPVALL
                     ITLIVAIMLLRDNRSFDQIEKICNNALGPICSIVLVTGAGGMFGGVLRASGIGDVLSE
                     MMKDTGMPIVVAAFIIATVFRVAQGSATVALTTTAALIAPTVAAATDLSQFDLCFIVI
                     AIASGATVLSHVNDSGFWLMSRFLEMDEKTTLKTWTMLETAIGLTGFACALIGSWLL"
     gene            1909..2424
                     /locus_tag="PXF40_001437"
     CDS             1909..2424
                     /locus_tag="PXF40_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HDL5802770.1"
                     /translation="MANGKAFILMGVSSTGKTSVGTAVAQRLGIKLIDGDDLHPRANI
                     LKMASGTPLNDADRTPWLERINDAVFSFEQKSEKGIIVCSALKKKYRDQIRQGNADVT
                     FLFLHGSFELVLARMQQRKGHFMKPEMLQSQFNTLEIPQADEPDVIFIDIDGSFDEVV
                     ERCVKAVEPLL"
     gene            complement(2478..3477)
                     /gene="gntR"
                     /locus_tag="PXF40_001438"
                     /pseudo
     CDS             complement(2478..3477)
                     /gene="gntR"
                     /locus_tag="PXF40_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674159.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
     gene            complement(3570..4730)
                     /locus_tag="PXF40_001439"
     CDS             complement(3570..4730)
                     /locus_tag="PXF40_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HDL5802771.1"
                     /translation="MIEQSYKIALLFNANKIYDRGVMQGIGQFIQASQCTWDIFVEDD
                     FVYHKNSIESLSIDGIIADFDDLETVELLKDIDVPIVAVGGSYQNPDYYPDLPYVATD
                     NYALVEAAFLHLKQKGINQFAFYGYPAETEKHWAIERKNAFIQLMEKYEHHPNCYIGD
                     QFHSDNWVELQAKLGEWLQTLPAHTGIIAVTDARARHLLQTCEHLKIAVPEQLCVIGI
                     DNEELIQYLSRVSLSSVTQGTSQIGYHAVKLLYRKLNNLPVSTKPILIPPVKVEERRS
                     TDYRSLQDPMVIQAMHFIRHRACQGIKVEQVLDHLKISRSNLEQRFKQEMNKTIHQVI
                     HEEKLARATYMLKFTEISTQEIANVCGYPSLQYFYAVFKKEFGKTPKEFRQE"
     gene            complement(4853..5239)
                     /gene="rplQ"
                     /locus_tag="PXF40_001440"
     CDS             complement(4853..5239)
                     /gene="rplQ"
                     /locus_tag="PXF40_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HDL5802772.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMASALVEHEIIKTTLPKAKEL
                     RRVVEPLITLAKADSVANRRLAFARTRNVDTVAKLFNELGPRFAQRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRPEVATEAAAE"
     gene            complement(5275..6264)
                     /gene="rpoA"
                     /locus_tag="PXF40_001441"
     CDS             complement(5275..6264)
                     /gene="rpoA"
                     /locus_tag="PXF40_001441"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HDL5802773.1"
                     /translation="MQGSVTEFLKPHLVNIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDIILTL
                     NKSGIGPVTAADITHDGDVEIVNPDHVICHLTDKNASINMRIRVQRGRGYVPASARLH
                     TQNDDRPIGRLLVDARFSPVDRIAYNVEAARVEQRTDLDKLVIEMETNGTLDPEEAIR
                     RAATILAEQLAAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIAED"
     gene            complement(6295..6921)
                     /gene="rpsD"
                     /locus_tag="PXF40_001442"
     CDS             complement(6295..6921)
                     /gene="rpsD"
                     /locus_tag="PXF40_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HDL5802774.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIESKCRNRLDVAPGQHG
                     ARKPRLSDYGSQLREKQKVRRIYGILERQFRNYYTEANRLKGNTGENLLVLLEGRLDN
                     VVYRMGFAATRAEARQLVSHKSIVVNGRVVNIPSFQVSVDDVVAVREKSKKQARIKAS
                     LELATQREKPTWLEVDATKMEGVFKRRPERSDLSADINEHLIVELYSK"
     gene            complement(6950..7339)
                     /gene="rpsK"
                     /locus_tag="PXF40_001443"
     CDS             complement(6950..7339)
                     /gene="rpsK"
                     /locus_tag="PXF40_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HDL5802775.1"
                     /translation="MAKTPVRARKRVKKQIADGVAHIHASFNNTIVTITDRQGNALAW
                     ATAGGSGFRGSRKSTPFAAQVAAERCAEMVKEFGLKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            complement(7356..7712)
                     /gene="rpsM"
                     /locus_tag="PXF40_001444"
     CDS             complement(7356..7712)
                     /gene="rpsM"
                     /locus_tag="PXF40_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019935869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HDL5802776.1"
                     /translation="MARIAGINIPDQKHTVIALTAIYGIGKTRAKAICAATGIAEDVK
                     IRELSEEQIEKLREEVGKFTVEGDLRREVTLSIKRLLDLGCYRGLRHRRSLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            complement(7850..7963)
                     /gene="rpmJ"
                     /locus_tag="PXF40_001445"
     CDS             complement(7850..7963)
                     /gene="rpmJ"
                     /locus_tag="PXF40_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HDL5802777.1"
                     /translation="MKVRASVKRMCRNCKVIKREGVVRVICSDPKHKQRQG"
     gene            complement(7988..9307)
                     /gene="secY"
                     /locus_tag="PXF40_001446"
     CDS             complement(7988..9307)
                     /gene="secY"
                     /locus_tag="PXF40_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HDL5802778.1"
                     /translation="MAKQPGYQGSTQKGTGELKSRLLFVLGALIVFRIGSFIPVPGID
                     ASVLSELIRQQQGTIIDMFNMFSGGALSRASIFALGIMPYISASIIIQLLTAIHPPLA
                     ELKKEGEAGRRKISKYTRYGTLLLAFIQSIGISLALPNMVHGLVPNPSILFYVTSVVS
                     LVTGTMFLMWLGEQITERGIGNGISLIIFTGIVADLPATIGQTIEQARQGELSFIVLL
                     LVAIIAFAVTYFVVFVERGQRRIVVNYASRQQGRMMAPARTSHLPLKVNMAGVIPAIF
                     ASSIILFPASITQWFGQSEGFEWLFNLSQLLQPGQPLYVVLFTMAVIFFAFFYTGMQY
                     NPRDTADNLKKSGAFVPGYRPGEQTSRYIDKVMTRLTLIGALYIAFVCLVPYIITSLW
                     KVPFQLGGTSLLIVVVVIMDFIAQVQSHLMSQQYDSVLKKANLKGLN"
     gene            complement(9310..9744)
                     /gene="rplO"
                     /locus_tag="PXF40_001447"
     CDS             complement(9310..9744)
                     /gene="rplO"
                     /locus_tag="PXF40_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HDL5802779.1"
                     /translation="MRLNSLSPAEGAKHSAKRLGRGIGSGLGKTGGRGHKGQKSRTGG
                     GVRRGFEGGQMPLYRRLPKFGFTSLKSFHVAEIRLNDLAKVDGNEVTLETLKAANIIT
                     KDILSAKVILAGKIERAVVVKGLRVTKGAKAAIEAAGGSIEE"
     gene            complement(9749..9925)
                     /gene="rpmD"
                     /locus_tag="PXF40_001448"
     CDS             complement(9749..9925)
                     /gene="rpmD"
                     /locus_tag="PXF40_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HDL5802780.1"
                     /translation="MAKIKVTQTRSSIARLPKHKATLKGLGLRHIRHTVELEDTPAVR
                     GMINQVSYMVKVEE"
     gene            complement(9932..10432)
                     /gene="rpsE"
                     /locus_tag="PXF40_001449"
     CDS             complement(9932..10432)
                     /gene="rpsE"
                     /locus_tag="PXF40_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HDL5802781.1"
                     /translation="MSNIEKQAGELQEKLIAVNRVSKTVKGGRIMSFTALTVVGDGNG
                     RVGFGHGKAREVPAAIQKAMEKARRNMINVALNEGTLQHPVKGSHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALENMKSPEMVAAKRGKT
                     VEEILG"
     gene            complement(10447..10800)
                     /gene="rplR"
                     /locus_tag="PXF40_001450"
     CDS             complement(10447..10800)
                     /gene="rplR"
                     /locus_tag="PXF40_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HDL5802782.1"
                     /translation="MDKKVARIRRASRARHLMREQGATRLVVHRTPRHIYAQVIAPNG
                     SEVLAAASTVEKVIKEQVKYTGNKEAAAVVGKIVAERAIAKGIKAVAFDRSGFKYHGR
                     VQSLADAAREAGLQF"
     gene            complement(10815..11348)
                     /gene="rplF"
                     /locus_tag="PXF40_001451"
     CDS             complement(10815..11348)
                     /gene="rplF"
                     /locus_tag="PXF40_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HDL5802783.1"
                     /translation="MSRVAKAPVNIPAGVEVKLNGQLLTVKGKNGELSREIHNAVEVK
                     QEADALTFAPREGIANADAQAGTARALVNNMVIGVTEGFTKKLQLVGVGYRAQMKGNA
                     VALSLGFSHPVEHTLPAGVTGECPSQTEIILKSADKQLIGQVAADIRAYRKPEPYKGK
                     GVRYSDEVVRTKEAKKK"
     gene            complement(11365..11757)
                     /gene="rpsH"
                     /locus_tag="PXF40_001452"
     CDS             complement(11365..11757)
                     /gene="rpsH"
                     /locus_tag="PXF40_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HDL5802784.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKVAISMPSSKLKVAIANVLAEEG
                     YIESVKVVEGVKPELEITLKYFQNKPVVESIQRVSRPGLRIYKRKDELPKVMGGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            complement(11794..12099)
                     /gene="rpsN"
                     /locus_tag="PXF40_001453"
     CDS             complement(11794..12099)
                     /gene="rpsN"
                     /locus_tag="PXF40_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HDL5802785.1"
                     /translation="MAKQSMIARDVKRAKLADKFYAKREELKKIISDVNASDEDRWAA
                     VLKLQTLPRDSSPIRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            complement(12111..12650)
                     /gene="rplE"
                     /locus_tag="PXF40_001454"
     CDS             complement(12111..12650)
                     /gene="rplE"
                     /locus_tag="PXF40_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HDL5802786.1"
                     /translation="MAKLHDYYRDTVVNELKAKFNYSSVMQVPRIEKITLNMGVGEAL
                     TDKKLLDNAVADLAAISGQKPLVTKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLNAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTSA
                     KTDEEGQALLAAFNFPFRK"
     gene            complement(12668..12979)
                     /gene="rplX"
                     /locus_tag="PXF40_001455"
     CDS             complement(12668..12979)
                     /gene="rplX"
                     /locus_tag="PXF40_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HDL5802787.1"
                     /translation="MAAKIRQNDEVIVLTGKDKGKRGKVTKVLPNGKVFVEGINIITK
                     HEKPVPALGKAGGLVKKEAAIDVSNVAIFNPETNKADRVGFRFEDGKKVRFFKSNEKT
                     I"
     gene            complement(12990..13361)
                     /gene="rplN"
                     /locus_tag="PXF40_001456"
     CDS             complement(12990..13361)
                     /gene="rplN"
                     /locus_tag="PXF40_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HDL5802788.1"
                     /translation="MIQEQTMLDVADNSGARSVMCIKVLGGSHRRYAAIGDIIKVTVK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGAVIRFDGNACVILNNNTEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            complement(13584..15419)
                     /gene="glmS"
                     /locus_tag="PXF40_001457"
     CDS             complement(13584..15419)
                     /gene="glmS"
                     /locus_tag="PXF40_001457"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HDL5802789.1"
                     /translation="MCGIVGAVAQRDIAEILVDGLHRLEYRGYDSAGVAVLNADDKTM
                     QIVRRVGKVKALDEALDTKPLLGGTGIAHTRWATHGEPSETNAHPHRSGKIAVVHNGI
                     IENYEELKIVLQERGYVFQSQTDTEVIAHLVEWELRSASSLLEAVQKTVVQLRGAYGT
                     VVLNEEEPEHLIVARSGSPLVIGYGVGENFLASDPLALLSVTRRFAYLEEGDVAEITR
                     RTVDIYDREGNKAEREIHEGNFEADAADKGQYRHYMQKEIFEQPVAIMNTLDGRIKDG
                     KVDISAIAPNAAEILSKVEHVQIVACGTSYNAGMVSRYWFESIAGVSCDVEIASEFRY
                     RKFVTRPNSLLITLSQSGETADTLAALRLAKESGYMAAMTVCNVASSSLVRESDFAFL
                     TKAGVEIGVASTKAFTTQLTCLLLLNVAIGRLQGRMSEEQEHHIVQSLQRLPAQIESA
                     LVFDKQIEKLSEDFADKHHTLFLGRGEYYPVAMESALKLKEISYIHAEAYAAGELKHG
                     PLALIDSDMPVVVVAPENDLLEKVKSNIEEVRARGGQLYVFADHDAGFEEAEGFKTIV
                     MPKVDEVTAPIFYTVPLQLLSYHIALIKGTDVDQPRNLAKAVTVE"
     gene            complement(15467..16228)
                     /locus_tag="PXF40_001458"
     CDS             complement(15467..16228)
                     /locus_tag="PXF40_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR family transcriptional regulator"
                     /protein_id="HDL5802790.1"
                     /translation="MSKRNTQQRRHLIVQMVQEKNEVSVDELAHFFETSEVTIRKDLT
                     ALEESGFLLRKYGGAVKIPSEMMEEAFIEQLSIQKKMIAQAARDCIRDHNRIIIDSGS
                     TTGALVKALNQTGLVVMTNSLNLATELTSLECEPTVLMTGGTWDSRSESFQGKVAEQV
                     LRSYDFDQLFIGADGLDLARGTTTFNELVGLSQVMAEVSREVIVLIESQKIGRKMPNI
                     ELKWQNITKIITDSQLSFETKEQIEKMGVEVVIAK"
     gene            complement(16385..16585)
                     /locus_tag="PXF40_001459"
     CDS             complement(16385..16585)
                     /locus_tag="PXF40_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HDL5802791.1"
                     /translation="MKSILKVVGAMVLMVAVSGCNNMTKTQRNTAIGAAIGGVAGHAI
                     GESTGATLGGAALGGVIGSQIK"
     gene            16810..17844
                     /locus_tag="PXF40_001460"
     CDS             16810..17844
                     /locus_tag="PXF40_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802792.1"
                     /translation="MKLKKLSLALSTLLLGSAFANSALAEGRLTVYCSATNELCEQEV
                     QAFGKKYNVKVAFVRNGSGSTLAKIEAEKNNPQADVWYGGTLDPHSQAAEMGLLEPYK
                     SPNLEQIIEKFRDPAKLKGNYSSAVYMGILGYGVNLDRIKKLGIEKVPSTWEDLLDPR
                     LAGEIQIADPQSSGTAYTAIATFVQLLGEEKAFDYFRKLHKNISQYTKSGITPARNTA
                     RGETAIGIGFLHDYAIEKKNGANIEMTAPTDGTGYELGGVSILKGARNLDNAKLFVDW
                     SLSKEAQELSWQKGNAFQVLTNTTAESSPYALDPKNLNLINYDFEKYGSSEERKRLID
                     KWVNEVKLAK"
     gene            17912..19842
                     /locus_tag="PXF40_001461"
                     /pseudo
     CDS             17912..19842
                     /locus_tag="PXF40_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016534092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
     gene            19940..20989
                     /gene="fbpC"
                     /locus_tag="PXF40_001462"
     CDS             19940..20989
                     /gene="fbpC"
                     /locus_tag="PXF40_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric ABC transporter ATP-binding protein"
                     /protein_id="HDL5802793.1"
                     /translation="MNNDFLVLKNVTKSFGKVTVIDNLNLSIPQGKMVTLLGPSGCGK
                     TTVLRLVAGLENPTSGQIFIDGEDVTQSSIQHRDICIVFQSYALFPHMSIGDNVGYGL
                     KMQGVPKEERLQRVKEALELVDLGGFEDRFVDQISGGQQQRVALARALILKPKVLLFD
                     EPLSNLDANLRRSMREKIRELQQRLNITSLYVTHDQSEAFAVSDEVIVMNKGKIMQKA
                     PAKELYLRPNSLFLANFMGESSIFEGTIAGNQININGYQFTLANAEQFELPDGEYLVG
                     IRPEAIHLAEQGNISQLCKIKNAVYMGNHWEIIAEWEGKDLLVNTKPENFYPHIKQAY
                     VHFIEQGVFLLKKEL"
BASE COUNT         6005 a         4694 c         4161 g         6236 t
ORIGIN      
        1 gctaatacga ttcaattaaa aacaaaaaca aaatttattt catcaatgtc tgaattatta
       61 aaaaatatgg tactaaatca tcaaggcatt gcatggctcc ctgaatattc tattagtgaa
      121 gaattacaca ataaaaaagt aatcatacta gacaaaaatg aattagttat tccaataaaa
      181 agttatattt acagaatgaa tacgagacta aataatgcag cagaaaggtt ttggaataat
      241 ttacaaaata ttcagtttat aaatgaagat atattaaata aaccctaaca ttctataata
      301 agaaaaagcg gtcgattctc tgccaaattt tgcaaatttt agaagaaaac agaccgcttg
      361 tcagggttgg aattagagta accagctgcc aatcaatgca caggcaaaac cggttaaacc
      421 gatggcagtt tcaagcattg tccacgtttt gagggtagtt ttttcgtcca tttcaaggaa
      481 acggctcatc agccagaaac cggagtcatt gacgtgggaa agcaccgtcg caccggaggc
      541 gatagcaatc acgataaaac agaggtcgaa ctggcttaaa tcagtcgctg ccgccacagt
      601 tggcgcaatc aacgctgctg tggtggttaa agcaacggtt gccgagcctt gtgcgacacg
      661 gaataccgta gcaataataa aggcggcaac cacaatcggc attccggtgt ctttcatcat
      721 ttccgataat acatcgccaa tcccgctggc acgcaacacg ccaccaaaca ttccgcctgc
      781 accggttact aagacaatcg agcagattgg gccaagggca ttgttacaga ttttttcgat
      841 ttggtcgaaa ctgcgattat cccgcaacag cataatcgcc acaattaagg taatcagtaa
      901 agcaacaggg gttttgccga ttaagcgaag gctctgcacc cacatttcac tgccatcaat
      961 cactttagca acggagaggg tattcaagcc ggtatcaaac aaaatcagga taatcggcag
     1021 caccaacacc gtgagtacct tgccaaaact tggcgggttt tgtactgcca tttcgtttgc
     1081 cgataagccg tttaaaaacg ctttcggcaa atcaacgtga atgcgtttgc tgataaattg
     1141 gctgaacagg taagtgccga tataccacgt tgggattgca caaaccaagc ccaccaagac
     1201 taacagcccc atattcacac caagcagatc gccggaggca accgggccgg ggtgcggagg
     1261 tagaaaggcg tgcattaccg caaacgcacc ggcagacgga aacgcatagc gcaacaccga
     1321 accgccgaac tgttttgcca cgctaaaaat aatcggtaac atcaccacca agccggcatc
     1381 aaagaaaatc gggaagccga ataacagcga ggcaacgccc aacgcaaaag gcgcacgttc
     1441 tttgccgaat ttattgataa gcgtatccgc aagcactttc gccccgccgg tgatttcaag
     1501 caagcgacca atcatcgccc caagccccac cagtaacgcc actgatgcca gcgtactacc
     1561 aaaaccattc aacaatgttg gcaggatttt atctaccgga ataccggcag ctaatgcagt
     1621 gagcaggctc acaataatca atgccacaaa agcgtggact ttaaatttca taatcagcac
     1681 cagcaataaa atgatggcag caaacataat gaacagtaac ataggatctc ctaaggttga
     1741 attgttatcg gtaacataac caaaaagcag tttagagtaa acggttgcag ggcttttatt
     1801 ttaaaaatgt gatctacttc aagttttctg gaaatagcag atgatttttc agcataacct
     1861 gttacattaa cggctaagtt aacgttacca gtaacacaag gaaattcaat ggcaaacggc
     1921 aaagcattta ttttgatggg cgtgtccagc accggcaaaa ccagcgtggg aacggcagtc
     1981 gcacagcggt tgggaataaa attgattgat ggggacgact tacaccctcg tgccaatata
     2041 ctgaaaatgg caagtggcac gccactcaat gatgcagatc gcacaccgtg gttggagcgg
     2101 attaacgatg cagtgttcag ttttgaacaa aaaagcgaaa aagggattat cgtctgctca
     2161 gcattgaaga aaaagtaccg agaccagatc cgacaaggca atgccgatgt gacttttcta
     2221 ttcttgcacg gctcgtttga actggtgctg gctcgaatgc aacaacgcaa agggcatttt
     2281 atgaaaccgg aaatgcttca aagccaattt aatacgctgg aaattccgca ggcagacgaa
     2341 ccagatgtga tatttattga tattgacggc agttttgacg aggtggtgga gcgttgcgtg
     2401 aaagcagttg agccgttgct ttaatcacaa gtggtggatt ttgcggattt ttttgcaaat
     2461 ttaaccgctt gtccgggcta cacactttcc cccaaatgga tctgatagcc caagttaatt
     2521 atggagcttt gttgtggtac gccgtgaata cggttgagca gctcttgggc ggcaactctg
     2581 cctatttcaa ggcgaggtgt gatgacgctg gcaagctgtg gcgtgaggga ttgcccgaca
     2641 tcgtgtccgt gaaagccggc gattttaatc tgctgcggca catgaatgcc taaccgttgg
     2701 cactcaaata atgccccgat tgccaaatcg tcattggtgc aaaaaatgcc gtctagctgc
     2761 ggaatgtgtt gcagggcttg ttttagctgg cttgcgccaa gcgtgaaaga agaatgctct
     2821 gcagtagtaa tgctgtgtgg gcttaagccg tgtttgagca ttgcctgttc gtagccctgc
     2881 attttcagct gagagcgttt atccattctc gccccgaaat acaccacctg tcggcagcct
     2941 cgatgaatca ttgtctcgac cattgcttga gccgcagaaa tattgtcaat atccgaccgc
     3001 ttgttgaatg ccacattcgc cgctttccat tatctcaatc accggaatat tcgccacttc
     3061 cagcattttc aaggtgcggg gcgagtggtg attttccgat aagataatgc cgtcaatatt
     3121 gtacgaaagc agcgactcaa tccgctgctc ttccttttgt tcgctgtaac catagtgggc
     3181 gagcatggtt tgatagctgg cttggtcggt aatctgctca atgcctttaa tcacatcggc
     3241 aaacacttga ttggtaagcg aaggaaccag cacgccaatt gcacggcttt tggcattcga
     3301 gagaatatcc ggtgcacggt ttgggatata gccaaacagc tcaatcgctt gtgcaatccg
     3361 ctcgccggtc tccttggcaa cggtgtttgg atcccgcaaa aagcgactga ccgtcatttt
     3421 ggtaatgccg agatgggtag cgatgtcttg caaagttggg cgtttcggtt ttctcattgg
     3481 aatagataac gaaaaaattt aatttcgctg attataactg aagataaggc aataattgca
     3541 aaatattcgg tgaaattgac cgcttgttac tactcttgcc tgaactcttt cggggtttta
     3601 ccaaactctt ttttaaacac ggcatagaaa tattgtaaag agggataacc gcacacattg
     3661 gcaatttctt gggtcgaaat ctcggtaaat ttgagcatat atgttgctct tgctaatttt
     3721 tcctcgtgaa tcacctggtg aattgtctta ttcatttcct gcttaaaacg ctgttcaagg
     3781 ttagagcggg aaattttaag atgatccagt acttgctcta ctttaatgcc ttggcaagct
     3841 cggtgacgaa taaagtgcat agcttggatt accattgggt cttgcaaaga acgataatcg
     3901 gtcgaacggc gttcttccac ttttaccggc gggattaaaa tcggcttggt tgaaaccggt
     3961 agattattta attttcgata taataacttc acagcgtgat agccgatttg tgatgttcct
     4021 tgtgtgactg aagaaagaga aacccgagag aggtattgaa tcaactcttc gttatcaatg
     4081 ccgatcacgc aaagttgttc aggtacagcg atttttaaat gctcacaggt ttgaagcagg
     4141 tgtcttgccc ttgcgtcagt aacggcaata atgcccgtgt gggctggtaa ggtttgtaac
     4201 cactcgccta atttggcttg taattcaacc caattatctg aatgaaattg atcaccaata
     4261 taacaatttg ggtgatgttc atatttttcc atcaactgaa taaaggcatt ttttcgctct
     4321 atcgcccaat gtttttccgt ttctgcagga tagccgtaaa acgcaaattg gttgattcct
     4381 ttttgtttta ggtgtaaaaa tgctgcctca actaaggcgt aattgtcggt agcaacataa
     4441 ggaaggtcag ggtaatagtc agggttttgg taagaaccgc ctactgctac aatggggacg
     4501 tcaatatctt taagtagctc aactgtttcc aaatcgtcaa aatcggcaat aatgccgtca
     4561 atcgacaggc tttcgatact atttttatga tagacaaaat catcttccac aaaaatatcc
     4621 caagtacatt gtgatgcttg aataaactgc ccaatgccct gcattactcc tctgtcataa
     4681 attttgttag cattaaaaag taaggcaatt ttataagatt gttctatcat tacttcctcc
     4741 agtacccact ttcaaaagta actataaaat aaaattattt tttgatcaaa acgaataaaa
     4801 gaataaaacc ccggtatttc taccagggtt ttaagctcaa ttttgattaa gattattccg
     4861 cagctgcttc agttgcaact tctgggcgat ccactaactc aatgtaagcc attggagcat
     4921 tatcacctgc acggaaacca cattttaaaa tgcgagtgta accacccgca cgttgtgcaa
     4981 aacgtggacc taattcattg aataatttag caactgtatc aacgttgcgt gtacgggcaa
     5041 aagctaaacg gcgatttgca acgctgtctg ctttagctaa agtaattaac ggctcaacta
     5101 cacggcgtaa ctctttcgct tttggtaaag ttgtcttgat gatttcgtgt tcaacaagcg
     5161 cacttgccat attacggaac atcgcttggc gatggctgct gttacggttt aattgacgtc
     5221 cactcttacg atggcgcata acctattcct tcttagaaaa tctataccga aaaactagtc
     5281 ttctgcaata cttgcaggtg gccagttttc aaggcgcata ccgagtgata aaccacgaga
     5341 agcaagaaca tccttaatct ctgtaagaga ttttttaccc aagttcgggg ttttaagaag
     5401 ttcaacttct gtacgttgta ctaaatcacc gatatagtga attgtctctg ctttcaaaca
     5461 gttagcagaa cgaactgtca gctctaggtc atctactgga cgaagaagaa taggatcaaa
     5521 ttccggtttt tcttctttca cttcaggttg acgaacatca cgcaaatcaa cgaatgcagc
     5581 aagttgttct gctaaaatcg ttgcagcacg acggatagct tcttcaggat ctaacgttcc
     5641 gttagtttcc atctcaataa caagtttatc taagtctgta cgttgttcaa cacgagcagc
     5701 ttcgacattg taagcaatgc gatctacagg tgaaaaacgt gcatctacta ataaacgacc
     5761 gatagggcgg tcatcgtttt gagtatgaag acgtgctgat gcaggaacat aacctcgacc
     5821 acgttgaaca cgaatgcgca tattaattga tgcattctta tctgttaaat gacagattac
     5881 gtgatcagga ttcacaattt ctacatcgcc atcgtgtgtg atgtcggctg cagttacagg
     5941 gccaattcca gatttattta gtgtcaaaat aatatcatct ttattttgca cttttaccgc
     6001 tagaccttta aggtttaata atacctcaag aatatcttcc tgaacgcctt ctttgctgct
     6061 gtactcatgc agtacaccat caatttcaac ttcagtaact gcacaacccg gcatagatga
     6121 aagtaaaatg cggcgaagtg cgttacctaa tgtatggcca aaaccacgct ctaacggctc
     6181 taatgtcact ttagcatgag ttgaactaac ttgttcaata tttactaagt gcggctttaa
     6241 aaattctgtc acagaaccct gcattttttc ctctctttgc ggttaagcta actattattt
     6301 agagtaaagc tcaacgatca gatgttcatt aatatctgct gatagatcag aacgctctgg
     6361 acgacgttta aatacgcctt ccattttagt tgcatcaact tctaaccaag ttggtttttc
     6421 acgttgagtt gctaattcta atgatgcttt aatacgtgct tgttttttcg atttttcacg
     6481 aacagcaaca acatcatcaa cagaaacttg gaatgaagga atgtttacta cacgaccgtt
     6541 tactacgatt gatttatggc taacaagctg acgtgcttct gcacgtgttg ctgcaaaacc
     6601 catacgataa actacgttat ctaaacgacc ttccaataat actagtaagt tttcaccggt
     6661 attacctttt aagcggttcg cttctgtata ataattacgg aattgacgct ctaagatacc
     6721 ataaatacgg cgaacttttt gtttttcacg taattgacta ccatagtcag ataaacgtgg
     6781 cttgcgagca ccatgttgac caggcgctac atcaagtcta tttctacatt ttgattcaat
     6841 cgcacgaacg cctgatttta agaataaatc agtaccttca cgacggctta gcttgagctt
     6901 aggacccaaa tatcttgcca ttttctttct ccaattcttt taacgtcaat taaacacgac
     6961 gttttttcgg tggacgacaa ccgttatgtg gaatcggagt cacatcagta atattcgtga
     7021 tacggaaacc tgctgcattt aatgcacgga ttgttgactc acgacctgga cccggtcctt
     7081 taaccataac ttccaaattc tttaaaccaa actctttaac catttctgca caacgctctg
     7141 cagcaacttg agcagcgaat ggagtcgatt tacgagaacc acggaaacct gaaccacctg
     7201 cagttgccca agctagagca ttaccttgac ggtcagtaat agtaacgatt gtgttattga
     7261 aagatgcgtg gatatgagct acgccatctg caatctgttt ttttacgcgc ttacgtgcgc
     7321 gaactggtgt tttagccatt atttatctac tccgactatt ttttgatcgg tttgcgtgga
     7381 cctttacggg tacgcgcatt agtcttagta cgttgaccac gtaccggtaa actacgacga
     7441 tgacgtaaac cacggtagca acctaagtct aaaagacgtt tgatgcttaa agttacttca
     7501 cgacgtaaat ccccttcgac agtaaattta ccaacttctt cacgcagttt ttcaatctgc
     7561 tcttcagaca attctctgat ctttacatct tcagcaatac ccgttgcagc acagatggct
     7621 tttgcacgag ttttaccgat accgtaaatt gcagttaatg cgattacagt gtgtttttga
     7681 tcaggaatgt taatgcctgc aatacgggcc actatgcact cctattattt aagtttattg
     7741 atatactgat cttgaaaagc ccgtttcagg atactcaaac agtatatcag gacgaatgag
     7801 ctgagcagta taactgctca gcgggttctt tgcaagaaat atgcgtaaat taaccttgac
     7861 gttgtttgtg tttaggatcg ctacaaatta cacgaaccac accttcacgt ttgattactt
     7921 tacaattacg gcacattctt tttactgaag cacgaacttt cattgcttat cctttattaa
     7981 cggcctatta atttagacct tttaagttag ctttcttcaa cacagaatca tattgttgag
     8041 acattaaatg actctgaacc tgtgcgatga aatccataat aacaaccact acaatcaata
     8101 atgatgtacc acctaattgg aatggcacct tccataacga cgtaatgatg taaggaacca
     8161 aacaaacaaa agcaatatat aacgcaccaa ttaaggttaa acgtgtcatt actttatcga
     8221 tataacgaga tgtttgttcg cctggtcggt aacctggtac aaacgcacct gatttcttaa
     8281 gattatccgc tgtatcacga ggattatact gcattcctgt ataaaagaaa gcaaagaaaa
     8341 tcactgccat tgtgaataat acaacataca gtggttgacc tggctgtaat agttgtgaaa
     8401 ggttaaataa ccactcaaat ccttcgcttt gaccaaacca ttgagtaatg cttgccggga
     8461 ataaaataat acttgaagca aaaattgccg gtattacccc tgccatattc acttttaatg
     8521 gtaagtgaga agttcttgca ggcgccatca ttcgaccttg ttggcgactt gcatagttta
     8581 caactattct tctttgtcca cgttcaacaa aaacaacaaa ataagttact gcaaatgcaa
     8641 ttattgcaac tagtagtaag acgataaatg ataactcgcc ttgacgggct tgttctattg
     8701 tctgccctat cgttgctgga agatctgcaa caatacctgt aaaaataatc aatgagatac
     8761 cgtttccgat accacgctca gtgatttgtt cgcctagcca cattaggaac attgttcctg
     8821 tcactaagct tactacagag gttacataga ataatatact tggattagga actaatccat
     8881 gtaccatatt cggtagggct agtgaaatac caatagattg aataaatgct aataacagtg
     8941 tgccatagcg tgtatattta ctgattttcc gacgacctgc ttcaccttct ttctttaatt
     9001 cagctagagg tgggtgaatc gctgtcaata attggataat aattgacgct gaaatataag
     9061 gcataatacc tagtgcaaat atagatgcac ggcttaaagc accaccagag aacatattaa
     9121 acatatcaat gatggtgcct tgctgttgtc gaattaattc ggataataca gaagcatcaa
     9181 tgccaggaac aggtataaaa gaaccgatac ggaaaacgat taacgcacct aaaacaaaca
     9241 atagtcttga tttaagctcg ccagtccctt tttgtgtact accttggtac cctggttgct
     9301 ttgccatctt tattcctcga tagaaccgcc agcagcttca atagcagctt tagcgccttt
     9361 agttacacgt aagcctttaa caactactgc tctttcaatt ttgcctgcta aaattacttt
     9421 agcagataaa atatctttag taatgatgtt tgctgctttt aatgtctcta aagttacttc
     9481 gttgccatct actttagcta agtcgtttaa acgaatttca gccacatgga atgattttaa
     9541 tgaagtaaaa ccaaattttg gcaaacgacg atataaaggc atttgaccac cctcgaaacc
     9601 acgacgaaca ccgccgcctg tacgagattt ttgaccttta tgaccgcgcc caccagtttt
     9661 acctaaacca gaaccaatac cacgacctag acgttttgca ctgtgcttag caccttcagc
     9721 tggagaaaga gaatttaaac gcattctatt actcctctac tttaaccata taagacactt
     9781 gattgatcat accacgcact gctggtgtat cttcaagttc tacagtatga cgaatatgac
     9841 gaagacctaa gccttttaac gttgctttat gtttcggtaa acgagcgata gagctacgag
     9901 tttgagttac tttaattttt gccatatcca attaccccaa aatttcttca actgttttgc
     9961 cacgttttgc agcaaccatt tcaggtgatt tcatgttctc aagtgcatcg attgttgcac
    10021 gaacaacgtt aattgggtta gttgaaccat acgctttaga aagaacgtta cgaacacccg
    10081 caacttctaa tactgcacgc attgcaccac cagcgatgat acctgtacct tcacttgctg
    10141 gttgcataaa tacgcgtgaa cctgtatgtg aacctttaac tggatgttgt aatgtacctt
    10201 catttaaagc tacattaatc atattgcgac gagctttttc catcgctttt tggattgctg
    10261 ctggaacttc acgtgcttta ccgtgaccaa aacctacacg accgttacca tcgcccacta
    10321 ctgttaaagc agtgaaactc ataatacgac caccttttac ggtttttgaa acacggttaa
    10381 ccgcgattag cttttcctgc agttcaccag cttgtttttc gatgtttgac atctcaaatt
    10441 cctctattag aactgtagac cagcttcacg agcagcatct gctaatgatt gcacacgacc
    10501 gtggtattta aaaccagaac ggtcaaaagc aaccgcttta atacctttgg caattgcacg
    10561 ctcagcaacg attttaccca ctactgctgc ggcttcttta ttgccggtat atttaacttg
    10621 ctctttaatt actttttcaa cagttgaagc tgctgctagt acttctgagc cattaggtgc
    10681 aatcacctgc gcatagatat ggcgaggtgt gcgatgcaca actaaacgtg ttgcaccttg
    10741 ctctctcatt aaatgacgtg cacggcttgc acgacggata cgagctactt tcttatccat
    10801 agtgttacct tactttactt tttcttcgct tcttttgtac gcactacttc atcagagtaa
    10861 cgtacacctt tacctttata aggttcaggt ttgcgatatg cacgaatatc tgctgccact
    10921 tgaccaatta actgtttgtc agcacttttc agaataattt ctgtttgtga tggacattca
    10981 ccagttacgc ctgctggcaa cgtgtgttct actgggtgag agaaacctaa acttaaagca
    11041 acagcattgc ctttcatttg tgctctataa ccaacaccca ctaattgcaa tttcttagta
    11101 aagccttcag taaccccgat taccatatta tttactagtg cacgagcagt acctgcttga
    11161 gcatctgcat tagcgatacc ttcacgtgga gcgaaagtta atgcatctgc ttcttgtttt
    11221 acttcaactg cattgtgaat ttcacgagat aactcgccgt ttttaccttt aactgttaat
    11281 agctgaccgt taagttttac ctcaacaccg gcaggaatat taacaggtgc ttttgcaaca
    11341 cgagacattt ttcctacctc tctattatgc tacgtaacag ataatttcac cgccgaggcc
    11401 cgcttgacgc gcagcacggt cggtcattac acctttagat gtagaaacaa ctgcgatacc
    11461 taaaccaccc attacttttg gtaattcgtc tttgcgttta taaatacgca gacccggacg
    11521 gctcacacgt tggatacttt ctacaaccgg tttgttttgg aaatatttta aagtaatttc
    11581 cagttcaggt ttaacacctt caacaacttt aacgctttcg atataacctt cttcagctaa
    11641 aacatttgca atagcaactt ttaacttaga tgaaggcata ctgattgcaa ctttgttcgc
    11701 agcttgaccg ttacgaatac gggtcagcat atctgcgatt ggatcttgca tgctcatgta
    11761 tttactccca tgattccaaa ttaaaagagg ttattaccag cttgccttct taagacccgg
    11821 aatttcaccg cgcatagcag cttcacgaac cttaatacgg cttaaaccaa acttacgaag
    11881 tacgccatgt ggacgaccag tttggcggca acgattacgc tgacggattg ggctagaatc
    11941 acgaggaagt gtttgtaatt ttaacactgc tgcccaacgg tcttcatcag atgcattcac
    12001 atcagagatg attttcttta attcttcacg ttttgcgtag aatttatcag ctaatttagc
    12061 acgttttaca tcgcgtgcga tcattgattg ttttgccacg ataacctacc ttatttacgg
    12121 aatgggaaat tgaaagcagc taataaagct tgaccttctt catcagtttt cgctgaggtg
    12181 gtgatagtaa tatctaaacc acgaacacga tctactttat cgtagtcgat ttcagggaaa
    12241 atgatttgtt cacgaacacc catactgtaa ttaccacgac catcgaatga cttagcgttt
    12301 aaaccgcgga agtcacgaat acgtggaaca gcgatagtaa tcaatctttc aaagaattcc
    12361 cacatacgtt caccacgtag ggttactttg caaccgattg gatacccttg acggatttta
    12421 aagcctgcaa cagatttgcg agctttagtt actaaaggtt tttgaccgct gattgctgct
    12481 aaatccgcta ctgcgttatc taacagtttt ttgtcggtca atgcttcacc cacacccatg
    12541 ttaagggtaa tcttttcgat tcgtgggact tgcatgacag atgagtagtt gaattttgct
    12601 tttaattcat taactactgt atctctgtag taatcatgca gtttcgccat cacattactc
    12661 cagttaatta aattgttttc tcgttagatt tgaagaaacg cacttttttg ccatcttcga
    12721 atctaaatcc tacacggtca gctttgttgg tttcagggtt gaagatcgca acgtttgaaa
    12781 catcgattgc agcttctttc ttcactaaac caccagcttt gcctaatgca ggaactggtt
    12841 tttcgtgttt agtgatgatg ttgataccct caacaaaaac tttaccattt ggtaacactt
    12901 tagttacctt accacgtttg cccttatctt taccggtaag aacaattact tcatcgtttt
    12961 gacggatttt tgcagccatt acattctcct tatagtactt ctggagctaa agagatgatt
    13021 ttcataaact tctcagaacg aagttcacga gtcaccggtc caaaaatacg agtaccgatt
    13081 ggttgctcag tgttattgtt taaaattaca caagcattgc catcgaaacg aataactgcg
    13141 ccatctgggc gacgaacacc cttcttggtg cgcacaacaa ctgcttttaa cacatcacct
    13201 tttttcactt taccgcgtgg aattgcttct tttacagtaa ctttaatgat atcgccaata
    13261 gcagcgtaac gacggtgcga tccacctaga accttgatac acattacgct acgagcccct
    13321 gagttatcag caacatccag catagtctgt tcttggatca tattagtgct ccgttaaaat
    13381 aaaaaaacac cctttcggga cgaacctatt tatacaaata taaatagggt gcaaaatata
    13441 ctacaaaaac cactagttaa tcaagtgaat ttttaagcta atttaatagt ttaagtaagc
    13501 ttatttataa attgtttcaa ctatcaataa actgtcctat aactcatata aaaaccccaa
    13561 gatatcttgg ggtttaacta acattactct acagtcaccg cttttgcaag gttacgaggt
    13621 tggtcaacgt ccgttccttt gattaaggca atgtgatatg aaagtagttg taacggcacg
    13681 gtgtagaaaa tcggtgcggt tacttcatca actttcggca ttacaatcgt tttgaagcct
    13741 tctgcttctt caaaacctgc atcgtgatcg gcaaacacat ataactgacc gcctcttgca
    13801 cgcacttctt caatattgga tttcactttc tcaagcaagt cattttccgg tgctaccacc
    13861 actaccggca tatcgctatc aattaatgct aacgggccgt gttttaactc gcctgcggca
    13921 taagcttctg cgtgaatata tgaaatctct tttaatttca atgcagattc catcgcaacc
    13981 gggtaatatt ctccacgacc taagaacaat gtgtggtgtt tatccgcaaa atcttccgat
    14041 aatttttcga tttgtttatc gaacactaac gcactttcaa tttgtgctgg taagcgttgt
    14101 aaagattgca cgatatggtg ttcttgctct tcactcattc tgccttgtaa gcgtccaatc
    14161 gccacattta ataacaataa gcaagttaat tgagtagtga atgctttggt tgatgctaca
    14221 ccaatttcaa caccagcttt ggttaagaat gcaaaatcgg attcacgcac taatgaagaa
    14281 cttgccacat tacacaccgt cattgccgcc atatagccag attctttcgc taaacgcagt
    14341 gcagctaacg tatctgcggt ttcacctgat tgtgaaagcg tgattaataa gctgttcggg
    14401 cgagtaacga atttacggta acggaattcg gaggcaattt ccacatcaca gctcacgcct
    14461 gcaatggatt caaaccaata acgtgaaacc ataccagcat tgtaagaggt tccacaagcc
    14521 acaatttgca cgtgttctac tttcgataaa atctctgccg cattcggtgc aatggctgaa
    14581 atatctactt taccgtcttt gatacgacca tctaaggtat tcataatcgc aaccggctgc
    14641 tcaaaaatct ctttttgcat atagtgacga tattgtcctt tatctgccgc gtctgcctca
    14701 aaattgcctt cgtgaatttc acgctctgcc ttgttgcctt cacggtcata aatatccact
    14761 gtgcgacggg taatttcggc tacatcacct tcttctagat aagcaaaacg gcgagttacg
    14821 cttaataatg caagtgggtc tgaagcaagg aagttctcgc ctacaccgta accaatcact
    14881 aacgggctac ctgagcgagc cacaattaaa tgctccggct cttcttcatt taataccact
    14941 gtgccgtaag caccacgcag ttgcaccacg gttttttgta ccgcttccaa taatgaagaa
    15001 gcagaacgca attcccattc aactaaatga gcaatgactt cggtatcggt ttgagattgg
    15061 aacacataac cacgctcttg taacactatt tttaactctt cgtagttttc gataatcccg
    15121 ttatgaacta ctgcaatttt gccactgcgg tgtgggtgag cattagtttc tgacggctcg
    15181 ccgtgcgttg cccagcgagt gtgtgcgatc ccagtgccgc ctaatagtgg cttagtgtct
    15241 aacgcctcat ctaaggcttt gactttaccg acacggcgta caatttgcat tgttttatca
    15301 tctgcattta atactgctac accagcagag tcatatccac ggtattctaa gcgatgtaaa
    15361 ccatcaacca agatttctgc gatatcacgt tgtgctactg cacctacaat tccacacata
    15421 aatttgcttt cctatgttta agtttaaaaa ttcatttgag ctactgctat tttgcaataa
    15481 ccacttcgac acccattttt tcgatttgtt ctttcgtttc aaaacttaat tgactgtcgg
    15541 taataatttt ggtaatattt tgccatttca attcaatatt cggcattttc cgaccgattt
    15601 tttgcgattc aattaacaca atcacttcac ggctcacttc tgccatcacc tgacttaagc
    15661 caactaattc attaaaggta gtcgtgcctc gagccaaatc taaaccgtcc gcaccaataa
    15721 aaagctgatc gaaatcatat gaacgcaata cctgttctgc tactttgcct tgaaaggact
    15781 cagaacggct atcccaagtg ccgccggtca tcaacactgt tggttcgcat tcgagggaag
    15841 tcaattccgt cgctaaattc agcgaatttg tcatcaccac caagccggtt tggttcaatg
    15901 cttttaccaa agctccggtc gtgctgccgc tgtcaataat gatgcgatta tgatcacgaa
    15961 tacaatcacg tgcggcttga gcaatcattt tcttttgaat cgaaagttgc tcaataaacg
    16021 cttcttccat catttccgat ggaattttta ccgccccacc atacttacgc aataaaaaac
    16081 cactttcttc caaagcggtt aaatcttttc taatcgtaac ttcagacgtc tcaaagaaat
    16141 gagcgagttc atctacactc acttcatttt tctcttgtac catttgaaca attaaatggc
    16201 ggcgttgttg cgtgttacgt tttgacatta taatcttcac ttaaatttcg tttcaaaact
    16261 tttgcattat aaagaaagct cgcgaaaaga aaagcagaaa atgcaaaatt tacaaaatct
    16321 atacaaaata aaaccgcttg taatattgat ttacaagcgg ttgatttctt gaaatttttt
    16381 gcaattattt gatttggcta ccaatcacgc caccaagtgc ggcaccacct aaagttgcac
    16441 cggtagattc accaatcgcg tgaccagcca caccgccaat tgctgcaccg attgcagtat
    16501 tacgttgcgt ttttgtcata ttgttacagc cagacacagc aaccattaat accattgcac
    16561 caacaacttt caaaatagat ttcataataa tccctcataa ttaatcaatt tcaaataagc
    16621 caatattctt ggctatgcta taagatttaa tttatttaga aaggttcaac tactaccacc
    16681 tatgaattgc aaattttttc acaatttagg ccgcttgttg attgaactgt gagcttgctc
    16741 acagaatttt atggtatttc ttgctatatt gtatagcaat ctatgcgata actcattaag
    16801 gaaataaaaa tgaaattaaa aaaattatct ttagcactct cgactttatt actcggttca
    16861 gcctttgcca actctgcttt agcggaaggt cgtttaaccg tttattgtag tgccactaat
    16921 gaactttgtg agcaagaagt gcaagcattc ggcaaaaaat ataatgttaa agtagcattt
    16981 gtgcgtaatg gttcaggcag tacattggcg aaaattgaag cggagaaaaa caatcctcaa
    17041 gctgatgtat ggtatggcgg tactttagat ccacattcac aagctgcaga aatgggttta
    17101 ctcgagccgt ataaatcacc gaatctcgaa caaattatcg aaaaattccg tgatccggca
    17161 aaattaaaag gcaactactc ttcggctgtg tatatgggga ttttaggtta tggtgtgaat
    17221 ttagaccgaa tcaaaaaact cggcattgaa aaagtgccta gcacttggga agacttgctc
    17281 gacccacgcc tagccggtga aatccaaatt gccgacccac aaagctccgg cacggcttat
    17341 actgcgattg cgaccttcgt acaactttta ggagaagaaa aagccttcga ctatttccgc
    17401 aaattacaca aaaacatttc acaatatacc aaatccggca tcacaccggc acgcaatacc
    17461 gcccgtggtg aaaccgctat cggtatcggt ttcttacacg actatgcgat tgagaagaaa
    17521 aacggggcta acattgaaat gaccgcacca acagacggca caggctacga attaggtggt
    17581 gtgagtatcc tcaaaggtgc aagaaatctt gataatgcaa aactgttcgt ggattggtcg
    17641 ctttctaaag aagctcaaga actctcttgg caaaaaggca atgcgttcca agtattaacc
    17701 aacaccaccg cagaatcttc cccttatgct ctagatccga aaaacttaaa cttaatcaac
    17761 tatgatttcg agaaatacgg ctcgagcgaa gagcgtaaac gcttgattga taagtgggta
    17821 aatgaagtaa aattagcgaa atagtgttaa tctttccact gaggggataa gcaattatcc
    17881 cctctctaat tataagaatc tgtgaggtgt tatgcagaat ttttcctttt cccgaccgct
    17941 tgtttgggtg cttatcgggt tactcggttt tctcttgtta ccgtctaaag ccttagatta
    18001 tgggctgttt gactcaacct ctgatgaact gctcgccgca atgggctggg cgtgctgttc
    18061 gcctttattt tcctgtcagc gattgtgctg aaaatcagcc tcggttatgc ggtgttgccg
    18121 ttgattattg ccattatggg gcttgcgacc ccaaatttag caacgctcaa agtaatgcag
    18181 ggtgaccgct ttattatcgg ctcgttactg agcattattc tgctgatttt cttttttatt
    18241 gtgtatccga ccatcgccat ttttgtgtcg atgttctaca acggctcgga atttgtgcca
    18301 agccaagtgc tgacaatttt gcaacaacct tatgtcgttc gagtcatcgg taactcgctc
    18361 tcggttgccg gcacggtggg cgttctctcc accctattcg gcttagcctt tgctctctac
    18421 accactcgga ttgctaaacg ctcggcgttt atcgggcgga ttttctcgat tttacctatc
    18481 gtcaccccgc cgtttgtggt cggtttaggc gtaaccctga tgcttgggcg ttccggctat
    18541 gttactgaat ttttagtgga ttactttggc tttgccaaca attggctgta cggtttcacc
    18601 ggtattgtga tagcccatac cctcgcgctc acgccaatgt cgtttatgat tttggaaggg
    18661 gcattgaaat ccattcaccc atcggtggaa gaagcagctt acaccctgcg ttccaaccgc
    18721 tatcaagcct tttttaacat tattttccca ttgttaaaac cggcattggc aaactccttt
    18781 ttagtggtgg caattcaatc cctcgccgat ttcagtacgc cgttagtatt gggcggtagc
    18841 tttgatgtga ttgcaaccca aatctacttc tacattgccg gttctcaact ggattatgcc
    18901 tctgctagca cgcttggggc aattttgttg gtgttctcct tagccatttt cgtgatccaa
    18961 tacctctgga tcggcaatcg ctcttatgtg acggtgtccg gcaaatccta tcggggtgat
    19021 gtccaagact taccaagcgg tatgaaatgg ctgattattt gcaccttatt gttctgggga
    19081 accttcaact tagtgctgta cggcagtatt ttctacggca gtttcaccgt gaactggggt
    19141 gtggattata ccttaaccct tgataactac atcaagctat tcgggcaagg gtttagcgat
    19201 ggcggtttcc cttcgttaat tcaaaccgtg attttcgctg ccgctgccgc cccgattact
    19261 gcactattcg gcttgctgat cgcctatgtg acagttcggc gtgatttcaa aggcaagaaa
    19321 accctggaat ttttaaccct gctctgcttt gccgtaccgg gaacggtggc aggtgtttct
    19381 tacattctcg cctttaacga tgccccgatt tacctaaccg gcaccggtat gatcatcatt
    19441 ctctcaatgg taatgcggaa tatgcctgtg ggtatgcgag cggcaattgc cggcttaggg
    19501 cagttggata aatcgctgga cgaagcctcg ctctcgctga aagccggttc gttcaaaacg
    19561 atgctgtttg tggtgttacc gctactcaaa ccggcactgc tctccgccct cgtcaccagc
    19621 tttgtgcggg caatgacgac tgtcagtgcg attgtattct tagtcaccgc cgacactcgt
    19681 gtggcaacct cctacattct caaccgtgtg gaagacggtg aatacggcat tgcgattgcc
    19741 tacggctcaa ttttaattgt ggtgatgatg gcgattatcc tgatttttga ctggattgtc
    19801 ggcgacaccc gtatcgcccg ttctaaggcg aaaaaaatgt aaaaagacat ctactctctc
    19861 cctttatggg agagagacag aaaaatactt cgttcagaag tatttttcag agagagggat
    19921 ataattaaaa ggacaatata tgaacaacga tttcttagta ttaaaaaacg tcaccaaatc
    19981 tttcggcaag gtgacggtca ttgataatct caacctcagt attccgcaag gtaaaatggt
    20041 gacattactc gggccgtccg gctgtggtaa aaccaccgta ctgcgtttag tggcagggct
    20101 ggaaaacccg acttcggggc aaatttttat tgatggcgaa gatgttaccc aaagttcgat
    20161 ccaacaccgt gatatttgca ttgtgttcca atcttatgcg ttatttccgc atatgtcgat
    20221 tggcgataat gtcggctacg gcttgaaaat gcagggcgta ccgaaagaag aacggctgca
    20281 acgagtgaaa gaggcgttgg aattggtgga tttaggcggc tttgaagatc gctttgtcga
    20341 tcaaatctct ggcggacaac aacaacgtgt cgccctcgcc cgtgccttaa ttctgaaacc
    20401 gaaagtgcta ctgttcgatg aaccgctgag taaccttgac gctaacttac gccgttcaat
    20461 gcgggagaaa atccgtgaat tacagcaacg tttaaacatt acttcccttt atgtgactca
    20521 cgatcagtcc gaagcctttg cggtttcaga tgaagtaatt gtgatgaaca agggaaaaat
    20581 tatgcaaaaa gctccagcca aagagttata ccttcgccct aattctttat tcttagcaaa
    20641 ttttatgggt gaaagcagca tttttgaagg cacgatagct ggcaaccaaa ttaatataaa
    20701 tggatatcaa tttacgttag caaatgctga acaatttgag ttacccgatg gggaatactt
    20761 agttggcatt cgtccagaag ctattcattt agctgaacaa ggaaatataa gtcaactctg
    20821 taaaattaaa aatgcagttt atatgggaaa tcattgggaa attatagctg aatgggaagg
    20881 gaaagattta ttagtcaata ctaaacctga aaatttttac cctcatatca aacaggccta
    20941 tgtacatttt atcgaacaag gtgtttttct tttaaagaaa gagctataac gaatttatac
    21001 taaattaaga ggaaggtagt tataactatt tagcaatttt gagaaaaata ggccgcatgc
    21061 aaaatctctt gatgacaagc ggtcttttct cgccga
//
LOCUS       DANMCL010000045        21020 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.045, whole genome shotgun sequence.
ACCESSION   DANMCL010000045 DANMCL010000000
VERSION     DANMCL010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 21020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21020
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.045"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            92..1855
                     /locus_tag="PXF40_001463"
     CDS             92..1855
                     /locus_tag="PXF40_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HDL5802794.1"
                     /translation="MIRYFFSLVLSLLMINSSHANLFSQPKFLKSEEAFVFSIQNENE
                     TLQLNWDIADNYYLYKKEIRVTPQNIEIGDITFPAAEQYNDEFFGQVEIYRNHLGLKV
                     PFKEIKDNASIVVEYQGCTKGFCYPPERVELKLDSILSATPEELAQLEAQAVEKSENF
                     AKTDNMAPPENVAKAEQDQLAENLANNRFSIFWFFVLGVGLAFTPCVLPMLPLLSAIV
                     IGNKQRPSTAKALLLSIAYVQGMAVTYTLLGLIVAAIGLPFQIALQSPPVLIGLSIVF
                     ILLACSMFGLYEIQLPNSWQQKLNAMSQKQQGGALGSVFLMGMIAGLIASPCTSAPLS
                     GALLYVAQSGDLVTGGLALYLLALGMGLPLILITLFGNKILPKSGEWLLKVKAAFGFV
                     MLALPVFLLSRVLPSHYEPFLWSALAVAFLIWLVDAIPSNSITKKIIKVLLLLALAIA
                     AKPWADLAWNGSTTQQQTTPHLALEKIQSLADLETKLTASKGKKVMLDLYADWCVACK
                     EFEKYTFSDQNVQNKLNEMVVLQIDMTKNSAENIELMKHFNVLGLPTILFFDENGNEM
                     SQSRVTGFLDAEQFLAWLNKL"
     gene            1865..2434
                     /locus_tag="PXF40_001464"
     CDS             1865..2434
                     /locus_tag="PXF40_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005821628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HDL5802795.1"
                     /translation="MNQENHKIEDIIRIFNQCFSDEYNTRLERGGNYPIYLPEFMDED
                     GVPSERPYNVILFAHGYYSSALHEIAHWLVAGEARRKLEDFGYWYEPDGRSAERQREF
                     ESAEIKPQAIEWVLATAAGFRYFASADNLSGNPGDNSAFKQAVYDQVKLYAERGYLPK
                     RAETLRKALCAFYGTPDVIDLAQFDIERI"
     gene            2660..4438
                     /locus_tag="PXF40_001465"
     CDS             2660..4438
                     /locus_tag="PXF40_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HDL5802796.1"
                     /translation="MSTLDFHFIHRFHQQVQALSHHPALRFMQDEKWSEISWLELQKQ
                     VNNLSYALLANGLAVQEKIAIFAQNMPRWTITDIAAMQIRAVAVPIYATSTTKQLEYI
                     LNDGDIKILFVGDQEQYDQAIEIANNCSLLIKIVAMKDSIDLRDFPIAQHWQDFIKVN
                     QDEAELTKRLNDKCLEDLFTLIYTSGTTGEPKGVMLDYANLAHQLQAHNKALPHIDEN
                     DISLSFLPLSHIFERAWVTYVLYRGAVNCYLEDPQQVRQALSTVRPTLMCAVPRFYEK
                     IYTAVWDKVQQAPIHRRALFKWAIRTAEDNLFGKKSAFFHRLQYIMADKLVLGKLRAL
                     LGGRIRMMPCGGAKLDPSIGLFFQSIGINVKLGYGMTETTATISCWQEKGFNINSTGT
                     LMPDVEVKISEENEILVRGGLVMKGYYKKPEATAQAFTAEGFLKTGDAGELDSEGNLY
                     ITDRIKELMKTSNGKYIAPQYIEGKIGKDKFIEQIAVIADAKKYVSALIVPCFDSLEE
                     YAKKLNIRYQDRLELIKHYEVVRMFEQRINELQKDLASFEQIKKFTLLSQAFSTKMEE
                     ITPTLKLRRKVILERYKQQIEKMYES"
     gene            complement(4471..4815)
                     /locus_tag="PXF40_001466"
     CDS             complement(4471..4815)
                     /locus_tag="PXF40_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5802797.1"
                     /translation="MIQRFEVGSRFSEMAIHNGVAYLAGQVPLDDTADAYTQTQQVLA
                     EIDKWLAKANSDKSKILMATVYLKEMADYAEMNRAWDEWVAPNNAPPRAAVEAKLANP
                     NWKVEIVVTAAV"
     gene            complement(4824..5372)
                     /locus_tag="PXF40_001467"
     CDS             complement(4824..5372)
                     /locus_tag="PXF40_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HDL5802798.1"
                     /translation="MAKLFANSTACLYLENMKKLIFLGLSALALAGCSSTISNPNQLI
                     GQWQCTIEYDDFNIRTVDNLRFSTNGTMTNQGGIYYPIQKSIFEYSLQQNGRWSVKNG
                     AIVYRIVSESVQRSHRSQIWSELQRDAELQQFEENLFSSLSDSDNNKTVELIITDFDE
                     KEMDIKQEIKGHKAYKGQCIKQ"
     gene            complement(5399..6436)
                     /locus_tag="PXF40_001468"
     CDS             complement(5399..6436)
                     /locus_tag="PXF40_001468"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HDL5802799.1"
                     /translation="MALKELDWANLGFSYIKTDYRFIAHWKDGKWNEGELTQDNTLHI
                     HEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDQNAERMQRTADRLLMPRVPTELFIR
                     ACKKVVKANQDWLGPYGSGATLYLRPFLIGVGENIGVKAAPEFIFSVFCCPVGAYFKG
                     GLAPSNFITTDYDRAAPMGTGGVKVGGNYAASLLPHELAVEQSSTTRKFADAIYLDPK
                     THTKIEEVGAANFFGITKDNKFITPISESILPSITKYSLLHLAQERLGMEAIEGDVYI
                     DQLDQFAEAGACGTAAVITPVGGIQHKDKFHVFYSETEVGPVTRRLYAELTGIQFGDV
                     EAPQGWIVKVE"
     gene            complement(6578..6904)
                     /gene="grxD"
                     /locus_tag="PXF40_001469"
     CDS             complement(6578..6904)
                     /gene="grxD"
                     /locus_tag="PXF40_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005705415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HDL5802800.1"
                     /translation="METIDKIKQQISENPILLYMKGSPKFPSCGFSARAVEAVINCQV
                     PFGYVDILTNPDIRAELPKFANWPTFPQLWVEGELVGGCDIVLEMLQKGELQTLLKET
                     AAKHAA"
     gene            complement(6976..7581)
                     /gene="recR"
                     /locus_tag="PXF40_001470"
     CDS             complement(6976..7581)
                     /gene="recR"
                     /locus_tag="PXF40_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HDL5802801.1"
                     /translation="MQTSPLLENLMEALRALPGVGPKSAQRMAYHLLQRNRSGGVALS
                     KALNEAMSHIGHCKSCRTFTEEEECTICKNPRRQMSGQLCVVEMPEDIQAIEQTGQFS
                     GRYFVLMGHLSPIDGIGPREIGLDLLQQRLEQESFHEVILATNPTIEGDATANYIAEM
                     CRMYNVKATRIAHGVPVGGSLEMVDGTTLSHSFAGRRDIDI"
     gene            complement(7589..7918)
                     /locus_tag="PXF40_001471"
     CDS             complement(7589..7918)
                     /locus_tag="PXF40_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HDL5802802.1"
                     /translation="MFGKGGLGGLMKQAQQMQERMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRIEIDPSLMEDDKEMVEDLVAAAFNDAVRRAEEMQKEKMASVTAGMQLP
                     PGMKFPF"
     gene            8058..9143
                     /gene="recF"
                     /locus_tag="PXF40_001472"
     CDS             8058..9143
                     /gene="recF"
                     /locus_tag="PXF40_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HDL5802803.1"
                     /translation="MALTRLLINHFRNIQHTDLAFSPHFNFLVGANGSGKTSLLESIF
                     YLGHGRSFKSHISNRIIHYDKDDFVLHGKIDEAKHSWSVGIQKFRSGETTLKINGEDG
                     NKIADLAHLLPMQVITPEGLTLLNGGPSFRRAFLDWGLFHQHPDFYAHWNNLRRLLKQ
                     RNSALQQVRSYQELKAWDIELVKTTYAVSEMRAEYAEALRPEIEKTCQFFLPEIEIGL
                     SFHQGWEKGADYAEILAQGFERDKALGYTMIGAQKADFRFKANGLPVEDVLSRGQLKL
                     LMCALRLAQGEHLVAQKQRQCLFLIDDFASELDPTKRELLAHRLRESGSQVFVTAITQ
                     DQLNQMQWQDRSDDCLFTVKNGEIQPQ"
     gene            complement(9334..10455)
                     /gene="tyrA"
                     /locus_tag="PXF40_001473"
     CDS             complement(9334..10455)
                     /gene="tyrA"
                     /locus_tag="PXF40_001473"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HDL5802804.1"
                     /translation="MNPLAPLREQIDQVDQQLIALLSERLALVAEVGKVKSEHGIPVY
                     APERETAMISARRSEAEKQGIPADLIEDVLRRIMRESYANENKHGFKRVNSDIQKIVI
                     VGGKGKLGGLFGNYLTLSGYNVEALGRDDWDNAEQILANADVVIVCVPIANTLATIER
                     LQSYLTENMILADLTSVKHQPLQKMLEVHNGAVVGLHPMFGPDIASQAKQVVACCHGR
                     FPERYQWLLEQIKIWGAKIEEIEAAAHDNAMTYIQALRHFSTFAFGLHLSRQPVQLSQ
                     LLALSSPIYRLELAMIGRLFAQDGSLYADIIADKPENLATIETLKESFEQGLDFFKRN
                     DKAGFIKAFEEVHHWFGDYSEQFLKESRVLLQQAHDSRK"
     gene            complement(10510..11568)
                     /locus_tag="PXF40_001474"
     CDS             complement(10510..11568)
                     /locus_tag="PXF40_001474"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HDL5802805.1"
                     /translation="MNTVFNQDSVHNVNIQDEKVLLTPQELKQEFPLPEHLRNQIERS
                     RKTISDIIHRRDKRQLIVIGPCSIHDPVAALEYGKKLKALSEQVSDKLYIVMRVYFEK
                     PRTTVGWKGLINDPKMDGSFDVETGLRIARKLCLDLAELGLPLATEALDPMTPQYLAD
                     LFSWSAIGARTTESQTHRELASGLSMAVGFKNGTDGDLAVALNAMQSSAQSHSFIGIN
                     QQGQVTLLKTKGNADGHIILRGGKTPNYEKQYVDDCEWVLKQANLPTAIMIDCSHGNS
                     NKDYRRQPLVAENVLEQLLAGNTSIIGLMIESNLHAGNQSSELPFEQMKYGVSITDAC
                     IDWQTTEELLTHFAEKLR"
     gene            complement(11608..12645)
                     /locus_tag="PXF40_001475"
     CDS             complement(11608..12645)
                     /locus_tag="PXF40_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5802806.1"
                     /translation="MHNKLLSICILRLSAIGDVCHTLAVIQAIQRKYPSAEITWIIGK
                     TEAYLMKDIPNVHLIPYDKKIGWKGIFTLWQKLSHKRFDFLLNLQTAFRASILSLGIK
                     AKKKIGFNQDRAREMQWLFTNQKVEMTDSPHVLDGQMMFAKAIGIMDLSAQWNLPVSD
                     EDLAYGKQFIDFTRKNILIAPCSSKKEKDWLPERYAEIANWLSKQNINVLIAGSPSQY
                     EMETAAKIQQLAPNCTSIAGKTTLKQLAGVIRQVDLVISSDSGPAHIATTQNTPVIGL
                     YAIHNPRRTGPYNDLDKVVSVYDEAILQSYGKPWQQLAWATKAKGKNWMEKITVESVK
                     QKVVETLKITL"
     gene            complement(12741..14180)
                     /gene="pyk"
                     /locus_tag="PXF40_001476"
     CDS             complement(12741..14180)
                     /gene="pyk"
                     /locus_tag="PXF40_001476"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5802807.1"
                     /translation="MSRKLRRTKIVCTMGPATDRGNTLEKIIAAGANMVRMNFSHGIP
                     EDHIERANKVREIAARLGRHVAILGDLQGPKIRVSTFKDGKIFLNIGDKFTLDADLPR
                     GEGHQEAVGLDYKNLPNDVVPGDILLLDDGNVQLKVLEVEGVKVHTEVTVGGPLSNNK
                     GINKLGGGLSAPALTDKDKEDIKLAAKIGVDYLAVSFPQSSADLHYARELAKEAGLEA
                     KIVAKVERAETVATEEAMDDIILGADVVMVARGDLGVEIGDAALVGVQKRLIRRARKL
                     NRVVITATQMMESMIKKPMPTRAEVMDVANAVLDGTDAVMLSGETANGDYPVETVKSM
                     AEVCLGAETMPSINISRHRMEGTFKSIEEAVAMSAMYTANHLEGVSAIISLTHSGETA
                     KLTSRISSGLPIYAMSRNQKALNLCALYRGVTPVYYNEDSRTMEGAKKAIAQLKEQGY
                     LLTGELVLLTHGDELKAGGTNTCRILRVE"
     gene            14307..14795
                     /gene="sixA"
                     /locus_tag="PXF40_001477"
     CDS             14307..14795
                     /gene="sixA"
                     /locus_tag="PXF40_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HDL5802808.1"
                     /translation="MNIWIMRHGEAGFNASSDAARCLTDNGIKNTISQGKWLGEHLAN
                     QQIQLDKILVSPYLRAQQTLENVLIGMQAVNFPQHFTNLIESWDEVTPDGNPHTVESY
                     LHFLREEGAKNILLISHLPLVFDLVQILTNNQSNVQFPTSTIAEINWVKTKAELIRVK
                     HT"
     gene            15019..16008
                     /gene="dusB"
                     /locus_tag="PXF40_001478"
     CDS             15019..16008
                     /gene="dusB"
                     /locus_tag="PXF40_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HDL5802809.1"
                     /translation="MQIGQYAIKNRIFLAPMAGITDQPFRRLCSQLGAGLTFSEMMST
                     NPDVWHTEKSRLRLAHHDEIGLNAVQIAGSDPVEMAKAAKINVEYGADIIDINMGCPA
                     KKVNKNMAGSALLRNPKLVAQILDSVVNAVDVPVTLKIRTGWDQENRNCLQIAKIAEQ
                     AGIKALTIHGRTRSCLFNGEAEYESIKAVKEAISIPVIANGDIDSAEKAKFVLDYTKA
                     DAIMIGRASFGNPWIFKEINDFFETGLSSPLSIDKKYQLMFKHIEDLHQFYGEEKGYR
                     IARKHVGWYTEKLNPESNFKRTFNTLSSTKEQLYALEDFVKSIHLESQLRKVG"
     gene            16013..16309
                     /gene="fis"
                     /locus_tag="PXF40_001479"
     CDS             16013..16309
                     /gene="fis"
                     /locus_tag="PXF40_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HDL5802810.1"
                     /translation="MLEQQPTQNPLTVTMLNAQAQQVNKPLRDNVKAALKNYLSQLNG
                     EDPTELYELVLSEIEHPMLDMVMQYTRGNQTRAATMLGINRGTLRKKLKKYGMG"
     gene            complement(16414..19200)
                     /locus_tag="PXF40_001480"
     CDS             complement(16414..19200)
                     /locus_tag="PXF40_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin family TonB-dependent
                     receptor"
                     /protein_id="HDL5802811.1"
                     /translation="MKYHHFRYSPVALTVLFALSHSYGAATENKKIEENNDLAVLDEV
                     IVTESHYAHERQNEVTGLGKVVKNYHEMSKNQILGIRDLTRYDPGISVVEQGRGASSG
                     YAIRGVDKNRVSLLVDGLPQAQHYHTLGSDANGGAINEIEYENIRSIELSKGASSAEY
                     GSGALGGAIGFRTKDAQDIIKEGQHWGLDSKTSYASKNSHFLQSIAAAGEAGGFEALV
                     IATHRHGKETKIHSEANKLKHNIRRITGFENRYDLYPNSAQNAPGGSFFIVEDTCPTL
                     DCTPRARVKLNRDNFPVRTFPEYTPEERKQLEQIPYRTEQLSAQEYTGKDRIAPNPLD
                     YKSNSVFMKFGYHFNSSHYLGAILEDTKQRYDIRDMQTPAYYTKDDINLSLRNYVYEG
                     DNILDGLVFKPRIPYGLRYSHVKFFDERHHKRRLGFTYKYKPENNRWLDSIKLSADKQ
                     DIELYSRLHRLHCSDYPVVDKNCRPTLDKSWSMYRTERNNYQEKHRVIHLEFDKALNA
                     GQGVFKQTHKLNLGLGFDRFNSLMDHGDMTAQYTKGGYTSYRGRGRLDNPYIYRRDPR
                     SIETVSLCNNTRGDILNCEPRKIKGDSHFVSFRDLVISEYVDLGLGVRFDQHRFKSDD
                     PWTLSRTYRNWSWNGGITLKPTEFVSLSYRISNGFRVPAFYELYGKRDHIGLKDNEYV
                     QRAQRSHQLEPEKSTNHEIGVSFKGQFGYLDVSYFRNNYKNMIATACKRIIQKSHCFY
                     NYHNIQDVALNGINLVAKFDLHGILSMLPDGFYSSVAYNRVKVKERKLTDSRLDSVND
                     PILDAIQPARYVLGFGYDHPEEKWGIGITTTYSKAKNADEVAGTRHHGIHRVDLGGKL
                     TGSWYTHDITGYINYKNYTLRGGIYNVTNRKYSTWESVRQSGVNAVNQDRGSNYTRFA
                     APGRNFSLAFEMKF"
     gene            complement(19294..>21020)
                     /locus_tag="PXF40_001481"
     CDS             complement(19294..>21020)
                     /locus_tag="PXF40_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HDL5802812.1"
                     /translation="LLNAALLAACSSNGGSFDVQSAKVESQTQTTPKKPSLQDDNSNA
                     RRTVSASETEALLQPGFGFSAKIPRRNLFPQGKEDVAPIGDIKEITGDLTKIPYEEEV
                     KAYGSSADGFSHTHDRNHKLYTRDFNFVRSGYVLHSGAKPEIKPKEILRTGAHGYVYY
                     LGIEPAKAIPTQKATYKGYWDFTTDARKGRDSKYFSNSAGINIGATPENSYDINVDDS
                     EKPMGHTGEFTADFANKTLTGTLVRNGYVSRSKEQKITTIYDIDAKIKGNRFSGKANA
                     KNTDDPYFGKSSTTLEGGFFGGKAQELAGKFLADDKSVFVVFAGKRDAKKDDSESAFD
                     AFKIKLKDLNKSEMDTFGNATHLIINNKQIPLIAEGKKSFAEMKFDDLVTRTIDDKTY
                     RVSVCCNNLDYVKFGTYSEGNNSDTAHQYLVGERTAVADLPTGTVKYRGTWDGVMYSK
                     SGSAGAESPSNSESGTRSLFDVDFVNKKINGKLIANDGVEERPMLTLEGNLKGNGFAG
                     TAKTGNSGFNLDPKSTNGGTVVHINTQFEGGFYGPKATELGGIVHSAETDKDRVSITF
                     GGKRQIEK"
BASE COUNT         6186 a         4496 c         3948 g         6390 t
ORIGIN      
        1 tctaacatcg ttaaatggcg taatttattt ggaatatgaa tactgattac gctataattt
       61 tcgccgagac aattaaaaat aggatttcaa tatgattaga tacttttttt cactcgtctt
      121 gagtttattg atgataaact catctcacgc aaatcttttc tctcaaccca aattcctaaa
      181 atcggaagaa gcctttgttt tttcaatcca aaatgaaaat gaaacattac agttaaattg
      241 ggatattgca gacaattatt atctttataa aaaagaaatc cgtgtcacgc cacagaatat
      301 tgagataggc gacatcactt ttcccgctgc cgagcaatat aacgatgaat ttttcgggca
      361 ggtggaaatc tatcgcaacc acttagggct aaaggtaccg tttaaagaaa ttaaagacaa
      421 cgcctcaatc gtagtggaat atcaagggtg taccaaaggc ttttgctatc caccggaacg
      481 ggttgagctt aaattagaca gtattctctc tgctacacct gaagaactgg cgcaactgga
      541 agcacaagcg gtcgaaaaga gcgaaaattt tgcaaaaacc gacaatatgg cgccccctga
      601 aaatgtggca aaagcagagc aagatcaact ggctgaaaat ttagctaaca atcgtttttc
      661 cattttttgg ttttttgtat taggcgttgg attagcattc actccttgcg tactgccgat
      721 gctaccactt ctctctgcga ttgtaattgg aaataagcaa cgcccttcta ccgctaaagc
      781 attgctgtta agtattgcct atgtgcaagg aatggcagtt acttacacct tacttggctt
      841 aattgtagcg gctatcggct tgcctttcca aatcgcctta caaagcccac cggtgttgat
      901 tggtttatct atcgtcttta ttctgcttgc ctgctcaatg tttggcttat acgaaatcca
      961 gctaccaaat agctggcaac aaaaactcaa tgcaatgagc caaaaacagc aaggtggtgc
     1021 gttgggtagc gtgtttttaa tggggatgat cgcaggctta attgcttccc cttgtacttc
     1081 tgccccactt tccggtgcgt tgctttatgt ggcacaaagt ggcgatttag tcaccggtgg
     1141 cttagccctc tatctactcg cactgggaat gggcttaccg ctgattttga ttaccttatt
     1201 cggcaacaaa attctgccaa aatccggcga atggctgtta aaagtgaaag ctgcattcgg
     1261 ttttgttatg cttgccttac cggtgttctt attaagccgt gtgctgccaa gccactatga
     1321 accgttttta tggtcggccc ttgcggttgc atttttgatc tggttggtgg atgcgattcc
     1381 atctaattca atcacgaaaa agatcatcaa agtcttatta ttgctcgctt tagccattgc
     1441 cgctaaacct tgggcagatt tagcttggaa cggctcaacc actcaacagc aaactacacc
     1501 gcacttagcg ttagaaaaaa ttcaatcact tgccgattta gagacaaaat tgaccgcttc
     1561 caaaggtaaa aaagtgatgc tcgatctcta tgccgactgg tgtgtcgcct gcaaagagtt
     1621 tgaaaaatac acctttagtg accaaaatgt tcagaacaaa ctgaatgaaa tggtagtgtt
     1681 gcaaatcgat atgacgaaaa actcggctga aaatatcgag ctgatgaaac actttaatgt
     1741 attaggtttg ccaacgattc tgttttttga tgaaaacggc aatgaaatga gccaatctcg
     1801 tgttactggc tttttggatg ccgagcaatt tttagcttgg ctgaataagt tataaagaaa
     1861 agaaatgaat caagaaaatc ataaaattga agacattatt cgcattttta atcaatgctt
     1921 ttctgatgaa tataacactc gcctagagcg ggggggtaat tatccgattt acttgcccga
     1981 atttatggac gaagatggtg tgccgagcga acgcccttac aatgtgattt tatttgctca
     2041 cggctattac agcagtgcct tgcacgaaat tgcccattgg ctcgttgctg gagaagctcg
     2101 gcgtaaactt gaagattttg gctattggta cgagccggac ggacgctctg ccgaacgcca
     2161 acgtgaattt gaaagtgcgg aaatcaaacc gcaagcgatt gaatgggtgt tagcaactgc
     2221 tgccggtttt cgttattttg ctagtgccga caatctctcg ggcaatcccg gcgataattc
     2281 agcctttaaa caagcagtgt acgaccaagt caagctctat gcagaacgtg gctaccttcc
     2341 caaacgagct gaaaccttgc gtaaagccct ctgtgctttt tacggtacac ctgatgtgat
     2401 tgatttagct caatttgata ttgaacgaat ttagttgcaa aatttttaac aaaacagacc
     2461 gcttgttgca tatacaagcg gtctcatttt tgaaaaatat tgcatttgta ctaaacgata
     2521 ccctacttat ctatttctat tgccttgatt acttcctatc caaaaccctt tgtttcagag
     2581 tacaactgtt tctttttttc atattttcta ttatattagc gtacaactgt tcactgaaat
     2641 agaaagtaaa aataagatta tgagcacttt agattttcac tttatccacc gtttccacca
     2701 gcaagttcag gctcttagcc accacccagc tttacgtttt atgcaagatg aaaaatggtc
     2761 agaaataagt tggttagaat tacaaaaaca ggtcaataat ctttcttatg ccttgctggc
     2821 aaacggtctt gccgttcaag agaaaatcgc tatttttgca caaaatatgc ctcgttggac
     2881 aattaccgat attgctgcaa tgcaaattcg tgcggtagca gtgccgattt atgcaaccag
     2941 taccaccaaa caacttgaat atatcctgaa tgacggggat ataaaaatcc tctttgttgg
     3001 cgatcaggaa caatatgatc aagccataga aatagcgaac aactgttcgc tattaataaa
     3061 aattgtcgcg atgaaagact caatagatct gcgtgatttc cctatcgctc aacattggca
     3121 agatttcatt aaggttaatc aagatgaagc tgaattaacc aaacgtttaa atgataaatg
     3181 cttagaggat ttattcactt taatttatac ctcgggaaca accggtgagc ctaaaggtgt
     3241 tatgttagat tatgctaatt tagctcatca acttcaggca cataataaag cactccctca
     3301 tattgacgaa aatgatatat ccctttcatt tttaccttta tcgcatatct ttgaacgtgc
     3361 ttgggtcact tatgtgctat acagaggggc agtaaattgc tatctggaag atcctcaaca
     3421 ggtacgtcaa gcactctcaa cggtacgacc tacattaatg tgtgccgtac caaggttcta
     3481 tgaaaaaatc tatactgcgg tgtgggataa agtccaacaa gcaccgatac atcgccgagc
     3541 gttatttaaa tgggcaatcc gtaccgccga agacaatctg tttggtaaaa aatcagcctt
     3601 tttccaccgc ttgcagtaca ttatggcaga taaattggtg ctaggaaaat tacgagcctt
     3661 actaggcggt cgtattcgta tgatgccgtg tggaggagct aaattagatc cgtctatcgg
     3721 gctatttttc caaagtatag gcatcaatgt aaaacttgga tacggaatga ccgaaactac
     3781 tgccactatt tcatgctggc aggaaaaagg ctttaatatc aactcaaccg gtaccttaat
     3841 gcctgatgtt gaggtcaaaa ttagtgaaga aaatgaaatt ttagtgcgtg gaggcttggt
     3901 tatgaaaggt tactacaaaa aaccggaagc cactgctcaa gcctttactg ctgaaggttt
     3961 tctaaaaacg ggagatgccg gtgaactgga ttcggaaggc aatctttata ttaccgatcg
     4021 tattaaagaa ttaatgaaaa cttcaaacgg taaatatatt gccccacaat acattgaagg
     4081 aaaaataggt aaagataagt ttattgagca aattgcggtg attgctgatg ccaaaaaata
     4141 tgtttctgcg ttgatagttc cttgctttga tagcctcgaa gagtatgcaa aaaagctcaa
     4201 tattcgctat caagacagat tagaactcat taaacattat gaggttgtca gaatgtttga
     4261 acaacgcatt aacgaattac aaaaagacct tgcaagtttt gaacagatca aaaagtttac
     4321 actactttcg caagcattta gcaccaaaat ggaagaaatt acgcctacat taaaattaag
     4381 acgaaaggtc attctagaac gctataagca acaaatcgaa aaaatgtacg aatcataatg
     4441 aaaaacagag atcgtctttc tgcttttcat ttataccgca gcggtaacca caatttcgac
     4501 tttccaattt ggattggcta atttagcctc caccgccgct cttggtggag cgttatttgg
     4561 ggcaacccat tcgtcccacg cacggttcat ttccgcataa tctgccatct cttttaaata
     4621 aaccgtagcc attagaattt tacttttatc gctgttggct tttgccagcc atttatcaat
     4681 ttctgcaagc acttgctggg tttgggtgta agcatcggcg gtgtcatcta acggcacttg
     4741 ccctgccaag taagccacac cgttatgtat tgccatttcc gaaaaacggc tacctacttc
     4801 aaaacgttga atcattttta cctctactgt tttatacatt gccctttata agctttatgc
     4861 ccttttattt cttgcttgat atccatttct ttttcatcaa aatcagtgat gattagttcc
     4921 actgttttat tattatcact atcagaaagt gagctaaata aattctcttc aaattgttgt
     4981 agctccgcat cacgttgtaa ttcagaccat atttgtgaac gatggctacg ctgtacagat
     5041 tctgagacga tacgataaac aatagccccg tttttcacac tccagcgccc attctgttgt
     5101 aatgaatact caaaaatcga cttttgaata gggtaatata taccaccttg attggtcata
     5161 gtcccatttg tggaaaatcg taaattatcc accgtacgaa tattaaaatc atcgtactca
     5221 atagtgcatt gccattgccc aatcagttga ttaggattag aaattgttga ggaacaacca
     5281 gctaatgcaa gtgctgataa acctaaaaaa attaactttt tcatattctc taaataaaga
     5341 caagcggttg aatttgcaaa aagttttgcc aattcgaccg cttgttactt gtgtaaaatt
     5401 actctacttt tacaatccag ccttgcggtg cttcaacatc gccaaattga ataccggtta
     5461 attctgcgta taaacggcgg gtgacaggcc ccacttcggt ttctgaatag aagacgtgga
     5521 atttgtcttt atgttgaata ccaccaaccg gcgtaatcac cgcagccgta ccacaagcac
     5581 cggcttcggc aaattggtct aactggtcga tatacacatc tccctcaatc gcttccatac
     5641 ctaaacgctc ttgagcaagg tgtagcaatg agtatttggt aatacttggc aaaatcgact
     5701 ctgaaatcgg ggtgatgaat ttgttgtctt tggtaatccc aaagaagttc gccgccccca
     5761 cttcttcaat tttggtatgg gttttcggat ctaaataaat cgcatcggca aatttacggg
     5821 tagttgaact ttgctcaacc gccaattcgt gcggtaataa actcgcagcg tagttaccgc
     5881 ctactttcac accacctgtt cccattgggg ctgcacggtc atagtcggtt gtaatgaagt
     5941 ttgagggtgc taagccacct ttgaaatatg cccccaccgg acagcagaat acggaaaaaa
     6001 taaattcagg tgcagctttc accccaatat tttcgcccac gccgattaaa aacggacgta
     6061 aataaagggt tgcccccgaa ccgtaaggcc ctaaccaatc ttgattggct tttaccactt
     6121 ttttacaggc acgaataaac agctcggttg gcacacgtgg cattaataaa cgatctgcgg
     6181 tgcgttgcat acgctcggca ttttgatccg ggcggaataa gttaattgag ccatctttac
     6241 agcgataggc ttttaacccc tcaaaacatt gttgcccata gtgcagggca gttgagcctt
     6301 cgtgaatatg cagtgtattg tcttgagtta attcgccttc attccatttt ccgtctttcc
     6361 aatgtgcaat gaaacggtaa tcggttttga tataagaaaa gcctaaattt gcccaatcta
     6421 actcttttaa tgccatgttg tgtcctttta tttttatgtt acgaaataat tttgacattc
     6481 taaaacaaaa tagctcttga ggtaagaagt ttaagcctaa atcgcaagaa aaaattaagg
     6541 ctcttaaaca taagagcctt aacatactgg tttgaaatta tgctgcgtgt tttgctgcgg
     6601 tttcttttaa taaggtttga agttcgcctt tttggagcat ttctaatacg atgtcacaac
     6661 cgccaactaa ttcaccttct acccataatt gtgggaaagt cggccagttt gcaaattttg
     6721 gcaattccgc acgaatatcc ggattggtta aaatatccac ataaccgaaa ggcacttggc
     6781 agttaattac cgcttccacc gcacgagcgg agaaaccaca agatgggaat ttcggtgaac
     6841 ctttcatata aagtagaatc ggattttcgc tgatttgttg tttgattttg tcaatagttt
     6901 ccatttttag cctcaaaata ataatttaaa atagttgagt aattatatca gaattaagtt
     6961 agcacagaaa tagctttaaa tatcaatatc acgccgtcct gcaaaagagt gagaaagcgt
     7021 tgtgccatca accatttcta atgaaccacc gaccggcaca ccgtgagcaa tacgagtagc
     7081 tttcacgtta tacattctgc acatttcagc aatgtagttt gcggtagcat caccttcaat
     7141 ggtcggatta gtcgccaaaa tcacttcgtg gaaagattcc tgttccaagc gttgttgcaa
     7201 taaatctaag ccgatttcac gagggcctat accatcaatc ggcgacaaat gccccatcag
     7261 cacaaaataa cgccctgaaa attgcccggt ttgctcaatc gcttgaatgt cttccggcat
     7321 ttctaccaca caaagttgcc cgctcatctg acggcgagga tttttacaaa tcgtacactc
     7381 ttcctcttcg gtaaaagtac ggcacgattt gcaatgtccg atatggctca ttgcctcatt
     7441 taaggctttt gacaacgcca caccgccgga acgattacgt tgcaacagat ggtaagccat
     7501 tcgctgtgcc gatttcggtc cgacaccggg caatgcacgc aaggcttcca tcaaattttc
     7561 aagtaaagga ctggtttgca tacttaaatt agaatgggaa tttcataccc ggcggcagtt
     7621 gcataccggc agtcacactt gccattttct ctttttgcat ttcttctgca cggcgaaccg
     7681 catcgttaaa ggcagcggca actaaatctt ccaccatctc tttatcatct tccattaatg
     7741 atggatcaat ttcaattcgg cggcaattgt gagccccgtt aatagtgact tttaccaaac
     7801 ccgcaccaga ctcgcctgtt acttctaatt gggcgatctc ttcttgcatt ttttgcatac
     7861 gctcttgcat ttgctgagcc tgtttcatta agccgcctaa gccacctttt ccaaacataa
     7921 tttttcctct taattttcaa taaaaaataa acggcttatt ctactgaacc actttctaat
     7981 ccgcaagcgg ttaatttttc ccaaaatttt gcaaatttgc taaaatggct actcttttta
     8041 ttcctcgcac tttaactatg gctttaaccc gtttattaat caaccatttt agaaatatcc
     8101 aacataccga tttagcattt agcccgcatt ttaatttttt agtcggggcg aacggaagtg
     8161 gcaaaaccag tttgttggaa tcaattttct atcttggaca cgggcgttca ttcaaaagcc
     8221 atatcagcaa ccgcattatc cattacgata aagacgattt cgtactacac ggtaaaattg
     8281 acgaggcaaa gcacagttgg tcggtcggca ttcagaaatt tcgcagtggc gagacgacac
     8341 ttaaaatcaa cggtgaagac ggcaacaaaa ttgccgattt agcccattta ttgccgatgc
     8401 aagtgatcac ccccgaaggc ttaaccttac ttaacggtgg tccgagcttt cgccgtgctt
     8461 ttttggactg gggcttattt caccagcacc ctgatttcta cgctcattgg aacaatcttc
     8521 gccgtttatt aaagcaacgt aattcggctt tgcaacaagt ccgctcttat caagaactca
     8581 aagcgtggga tatcgaattg gtgaaaacca cttatgccgt gagcgaaatg cgagccgaat
     8641 acgccgaagc gttacgcccc gaaattgaga aaacctgcca atttttcctg ccggaaatcg
     8701 aaatcggctt gagctttcat caaggctggg aaaaaggggc ggattatgcc gagattctgg
     8761 cacaaggttt tgagcgggat aaagctcttg gctatacgat gattggagct caaaaagccg
     8821 atttccgttt taaagcgaac ggcttaccgg tggaagatgt gctttcccgt gggcaattaa
     8881 agctattgat gtgtgcgtta agactggctc aaggcgaaca tttggtcgcc caaaaacaac
     8941 gccaatgcct atttttaatt gacgattttg cctccgaact cgacccaacc aaacgtgagc
     9001 ttttagcaca tcgtttaaga gaaagtggct cacaagtatt cgttaccgcc attactcaag
     9061 atcagctcaa tcaaatgcaa tggcaagaca gaagcgatga ttgtttgttt acggtaaaaa
     9121 atggagaaat tcagccacag taagcggtca gatttggggg caattttaca aaaatgtttc
     9181 ttccgatggc gcgagcgtcc acgctcgtgc caaaacaagc ggataatttt gcataaaaat
     9241 ttgcaaaaaa cagctcttta ttaaccgctt gtagaatatt aaatagcact agcgtggacg
     9301 ctagtgctat cagagcaaaa cctcaaccta cctttacttt cttgaatcgt gagcctgttg
     9361 gagcaatact ctactctctt tcaagaactg ctcggaataa tcgccaaacc agtgatgcac
     9421 ttcctcaaaa gccttgataa aaccggcttt gtcgttgcgt ttaaagaaat ctagcccttg
     9481 ttcaaaactc tcttttaagg tttcgatggt ggctaaattt tccggtttat cggcaataat
     9541 atcggcatat aagctgccgt cttgggcaaa taaacgccca atcattgcca actctaagcg
     9601 gtaaatcggc gaagatagtg ccaataattg agagagttgc accggctggc gagaaagatg
     9661 tagcccgaat gcaaaagtgg aaaagtggcg tagggcttga atgtaggtca ttgcattatc
     9721 gtgtgctgct gcctcaatct cttcaatttt tgccccccaa attttgattt gctcaagcaa
     9781 ccattgataa cgttcaggga aacgcccgtg gcagcaagcg accacttgct ttgcctgact
     9841 tgcaatatcc ggtccgaaca tcgggtgtaa accgactacc gctccattat gcacttccag
     9901 cattttttgc aacggctgat gtttgacgga ggttaaatcc gccaaaatca tattttcggt
     9961 taaataagat tgtaaacgct cgatggttgc tagggtgttg gcaatcggca cacacacaat
    10021 aaccacatct gcattggcta aaatctgctc ggcattgtcc caatcatcac gtcctaatgc
    10081 ctcaacatta tagccggata gggttaaata attgccaaac agcccaccta atttcccttt
    10141 accaccaaca atcacgattt tttgaatgtc cgaattaact cttttgaagc cgtgtttgtt
    10201 ttcattggca taagattcac gcattatacg gcgtagcaca tcttcaatga gatccgccgg
    10261 aataccttgt ttttccgctt cagagcggcg ggcggaaatc attgcggttt ctcgctccgg
    10321 agcataaaca ggaatgccgt gttctgattt gactttccca acttctgcca caagagctaa
    10381 gcgttcagaa agtaaggcga taagttgttg atcaacttga tcaatttgtt ctcgtaatgg
    10441 ggctaatggg ttcatatttg ttaccaattt acaagcggtc gtttttatgc aattttttgc
    10501 aaattatctt taacgcaact tttcagcaaa gtgagttaaa agctcttctg tagtttgcca
    10561 gtcaatacaa gcatccgtaa tagaaacacc gtatttcatc tgctcgaacg gcaattctga
    10621 tgattgatta cctgcgtgta aattgctttc aatcattaaa ccgataatcg aagtattgcc
    10681 agcaagtagc tgctctaata cattttctgc caccagcggt tggcggcggt aatctttatt
    10741 ggaattgccg tggctgcaat caatcataat cgctgtaggt aagtttgctt gttttagcac
    10801 ccattcacaa tcatcaacat attgcttttc ataatttggg gttttaccgc cacgtaaaat
    10861 aatatgtccg tctgcattac cttttgtttt gagtaaagta acttgcccct gttggttaat
    10921 gccgataaag ctatggcttt gagcggaaga ttgcatcgca ttaagtgcaa cggctaaatc
    10981 accatctgta ccatttttaa agcctaccgc cattgacaaa cctgaggcta attcacggtg
    11041 agtttgagac tcagttgttc ttgctccaat tgccgaccag ctgaacaaat ccgctaaata
    11101 ttgtggtgtc atcggatcta aggcttcggt cgctaacggc aagccaagtt cggctaaatc
    11161 caaacagagt tttcgtgcga tacgtaagcc ggtttcgaca tcaaaagagc cgtccatttt
    11221 cggatcgtta atcagccctt tccaacctac agtagtgcgg ggcttttcaa aataaacccg
    11281 catcacaata tacaacttat cactcacttg ctccgaaaga gcttttaatt ttttaccata
    11341 ttcaagggca gcaactgggt cgtgaatcga acaaggtcca atcacaatca gttggcgttt
    11401 atctcgtctg tgaataatat cggaaatcgt tttgcgtgaa cgttcaattt gattgcgtaa
    11461 atgttccggc aacggaaatt cttgttttaa ctcttgtggg gtcagtaata ccttttcatc
    11521 ttggatattt acgttatgca cgctatcttg attaaacact gtgttcattt taatttcctt
    11581 ttgtgtaaat cttttaatac acaaacttta caacgtaatt tttaaagttt caactacttt
    11641 ttgtttcaca ctctccaccg tgattttttc catccaattt ttgcctttag ctttagttgc
    11701 ccaagctaat tgctgccaag gtttaccata agattgcaaa atcgcttcat catataccga
    11761 aaccactttg tctaagtcat tgtaagggcc tgtccgtctt ggattatgaa tcgcatacaa
    11821 cccaatcacc ggcgtatttt gcgtagtggc gatatgggca ggacctgaat ctgaagagat
    11881 caccaaatca acctgacgaa taacacctgc aagctgtttt agcgtggttt taccggcaat
    11941 actcgtacaa ttcggggcaa gttgttgaat tttggctgcg gtttccattt catattgcga
    12001 tggagaacct gcaattaata cattgatatt ttgcttactt agccagttag caatttctgc
    12061 atagcgttcc ggcaaccaat ctttctcttt cttgcttgaa caaggagcaa tgagtatatt
    12121 tttccttgta aaatcaataa attgtttgcc ataagctaaa tcttcatcac tcacaggtaa
    12181 attccattgt gccgataaat ccattatccc aatggctttg gcaaacatca tttgcccgtc
    12241 aagcacgtga ggagagtctg tcatttctac tttctggttg gtaaacaacc attgcatttc
    12301 ccttgctctg tcttgattaa agccgatttt tttctttgct ttaatcccaa gcgatagaat
    12361 tgaagctcgg aatgccgttt gtaaatttaa taaaaaatca aaccgcttgt gagaaagttt
    12421 ttgccaaagt gtaaagatac ctttccaccc tattttttta tcataaggaa ttaagtgaac
    12481 attcggaata tctttcatta aatacgcttc cgttttgccg ataatccaag taatttcagc
    12541 actaggatat tttcgttgaa tagcttgaat aaccgctaag gtatggcaaa cgtcgccaat
    12601 ggcagaaagg cggagaatac agatagaaag aagtttattg tgcataataa tatcaatagt
    12661 tcagattaca ttaagctata ttaagacaga aaaaaagcca cataaagtgt tttatgtggc
    12721 ttttgcgtta atcgtttaga ttattcaact cttaagatac gacaagtatt tgtaccgcca
    12781 gcttttaatt catctccgtg agttaaaagc actaattcgc cggttaataa atagccttgt
    12841 tcttttaatt gagcaatggc ttttttcgcc ccttccattg tgcggctgtc ttcattgtaa
    12901 tataccggtg ttacaccacg atataacgca caaaggttta atgctttttg gttacgagac
    12961 atcgcataaa tcggtaaacc tgagctgata cggctggtta atttagccgt ttcgcctgaa
    13021 tgagttaatg aaataattgc cgatacacct tctaaatggt ttgcggtgta cattgcagac
    13081 attgccacag cttcttcgat agatttaaac gtaccttcca tacggtggcg agaaatgtta
    13141 atgcttggca ttgtttcagc acctaagcac acttctgcca ttgattttac cgtttcaaca
    13201 gggtagtcac cgtttgcagt ttcgccggaa agcattaccg catcagtacc atctaacaca
    13261 gcatttgcaa catccatcac ttcagcacgg gtcggcattg gttttttaat catcgattcc
    13321 atcatttggg ttgcggtaat taccacacga tttagcttac gagcacggcg gattaaacgt
    13381 ttttgcacac ccactaaagc cgcatcacca atttcaaccc ctaagtcacc acgagcaacc
    13441 atcacaacgt ccgcacctaa aatgatgtcg tccattgctt cttcagtcgc aacagtttcg
    13501 gcacgttcaa ccttcgctac aattttcgct tctaagcctg cttcttttgc taattcacgt
    13561 gcataatgta aatctgcact tgattgaggg aatgaaaccg ctaggtaatc cacaccgatt
    13621 ttcgccgcta atttaatgtc ttctttatct ttgtcggtta atgcaggagc tgataaacca
    13681 ccacctaatt tgttaatccc tttattgttt gataacgggc caccaactgt cacttcagta
    13741 tgaactttaa cgccttccac ttccaacact ttcagttgaa cattaccgtc atctaacaat
    13801 agaatatcac caggtactac atcatttggt aagtttttgt aatctaaacc tacagcttct
    13861 tgatggcctt ctccacgcgg taaatctgcg tctaaggtga atttatcacc aatatttaag
    13921 aaaattttac cgtctttaaa tgtcgaaaca cgaattttag gaccttgcaa atcgcctaaa
    13981 atcgcaacgt ggcgacctaa tcttgcagca atttcacgca ctttattcgc acgttcgatg
    14041 tgatcttcag gaataccgtg agagaaattc atacgaacca tatttgcacc ggcagcaatg
    14101 attttttcca acgtattgcc acgatctgtt gcaggtccca ttgtacaaac gatcttcgtt
    14161 cttctgagtt ttctagacat tatttgactc catcaataaa tttaaaaatt aagttaaaat
    14221 ctttctaagc atcttgatta tgcgttaaac gagggtcatt atacgcctaa atcaagagag
    14281 tttaaataca actaaaggag aatgttatga atatttggat tatgcgccat ggggaagcag
    14341 gctttaatgc ttcgagtgat gctgctcgct gtttaaccga caatggtata aaaaacacca
    14401 tttcacaggg aaaatggtta ggagaacatt tagccaacca acaaattcaa ttagataaaa
    14461 ttctcgtcag cccatacctt agggcgcaac aaacgcttga aaatgtgctt attggtatgc
    14521 aagcggtcaa ttttccccaa cattttacca acctcattga aagttgggac gaggttacgc
    14581 ctgacggaaa cccgcataca gtagaaagct atctacattt tttaagagag gaaggcgcaa
    14641 aaaatattct tctgatttca catctcccac ttgtgttcga tctcgtccaa attttaacga
    14701 ataaccaaag caatgtacaa tttccaactt caaccatagc agaaattaat tgggtaaaga
    14761 caaaagctga gctaattcga gtaaagcata cttaattctt tcatttttag aatgtcaata
    14821 taaaaatttt caattttttt ataaattgtc gaatttatag acttccaaaa tacctaaaaa
    14881 atgcgtatca taccagccct caaatcagta ctaaactgat ccataagcta ttataagaaa
    14941 gtacggtatt taccgtactt tttatttgga tatccctctg gttaaaatta cttcaaattt
    15001 gttaataaaa ggttaaaaat gcaaatagga caatatgcaa tcaaaaatcg tattttcctt
    15061 gcacctatgg ctggaatcac agatcagcct tttcgccgct tatgtagcca acttggagca
    15121 ggtttaacat tttcagagat gatgtctacc aatcctgatg tatggcatac tgagaaatca
    15181 cgattgcggt tagcacacca cgatgaaata ggcttaaatg ccgtacaaat tgcaggttct
    15241 gatcctgttg aaatggcaaa ggctgcaaag ataaatgttg agtatggtgc cgatattatt
    15301 gatattaata tgggttgccc ggcaaaaaag gtgaataaaa atatggcagg ctctgctctt
    15361 ttacgtaacc ccaaattagt cgctcaaata ttagattctg tagtcaatgc cgttgatgtc
    15421 cctgtgacac taaaaattag aacaggttgg gatcaggaaa atagaaattg tctgcaaatt
    15481 gcgaaaattg cagaacaagc cggcataaaa gctctcacta ttcacgggcg tactcgaagc
    15541 tgtttattta atggcgaagc tgaatatgaa agtattaagg cagtaaaaga agcaatttct
    15601 atcccagtga tagcaaacgg agacattgac tctgcggaaa aagcaaagtt tgttctcgac
    15661 tataccaaag ccgatgcaat catgattggg cgcgctagct ttggaaatcc ttggatattt
    15721 aaggaaatta atgatttttt tgaaactgga ttatcttcac cattatcaat tgataaaaaa
    15781 taccaattaa tgtttaaaca tattgaggat ttgcaccaat tttatggtga agaaaaaggt
    15841 tatcgtattg cacgaaaaca tgttggttgg tataccgaaa aattaaatcc ggaatcaaat
    15901 tttaaacgca cttttaatac actaagttcc acaaaagagc aactttatgc attagaagat
    15961 tttgttaaat cgattcattt agaatctcaa ttaagaaaag ttggataaaa aaatgttaga
    16021 gcaacaacct acacaaaacc cattaacagt aacaatgtta aatgcacaag cgcagcaggt
    16081 taataaacca cttcgcgata atgtgaaagc agcattaaaa aactatttat ctcaattaaa
    16141 tggtgaagat ccaacagaat tatacgaatt agtattatct gaaatcgaac acccaatgtt
    16201 agatatggtg atgcaatata ctcgcggcaa tcaaactcgt gcagcaacaa tgctaggcat
    16261 taaccgtggc acattacgca aaaaattaaa aaaatacggt atgggttaat ctaaccgacc
    16321 gttaaaacac gattttaatt cgtatgtaat tagttagagc caacaaaaaa cgctgaatat
    16381 actattcagc gtttttctat tttattttgc cgtctaaaac ttcatttcaa atgctaaact
    16441 gaaatttctc cccggagcgg caaatcgagt gtaattgcta ccccggtctt ggtttactgc
    16501 attcacaccg gattggcgca ctgattccca agtggaatat ttacgattag tcacattata
    16561 aattcctcca cgtaaggtgt agtttttata attgatgtaa ccggtaatat catgggtgta
    16621 ccaagaaccg gtcagtttgc cacctaaatc aacgcgatgt atgccgtgat gacgtgtgcc
    16681 tgccacctca tcggcgtttt tggctttaga ataggtggta gtaatgccaa ttccccattt
    16741 ttcttctggg tgatcgtagc cgaatccaag cacatagcgt gctggctgaa tcgcatctag
    16801 aataggatcg tttacgctat cgagtcttga gtcggttagt ttccgctctt ttacttttac
    16861 acggttataa gcaactgatg aataaaaacc atctggcagc atagataaaa taccgtgtaa
    16921 gtcaaattta gcgactaaat ttatcccgtt tagtgctaca tcttgaatat tatggtagtt
    16981 atagaaacag tgtgattttt gtattattct tttacatgct gtcgcaatca tatttttata
    17041 gttattacgg aaatagctca catcaaggta accaaattga cctttaaagc taactccaat
    17101 ctcatgatta gtcgattttt ctggctctaa ctggtggcta cgttgcgcgc gttgcacata
    17161 ttcgttatct ttaagcccaa tatgatcacg tttaccataa agttcataga atgcaggcac
    17221 tctaaaaccg tttgaaatgc gataagaaag cgatacaaac tctgttggtt taagcgtaat
    17281 cccaccattc caagaccaat ttcgataagt tcggctaagt gtccacggat catcagattt
    17341 aaatcgatgt tgatcaaaac gcacccctaa tcccaaatcc acatactcgc ttatcactag
    17401 atcgcggaag ctaacaaaat ggctatcgcc tttaatttta cgcggttcac agtttaagat
    17461 gtcgccgcgt gtattattac acaaagatac cgtttcaata ctgcgtggat cgcggcgata
    17521 aatatatgga ttatctaaac gccctctacc gcggtagctg gtataaccgc ctttggtata
    17581 ttgggcagtc atatccccat gatccataag cgaattaaat cgatcaaagc ccaaccctaa
    17641 attcagtttg tgggtttgct taaatacgcc ttgaccagca tttagcgctt tatcaaattc
    17701 taaatgaatg acacgatgct tttcttggta attattacgc tcagttcgat acatagacca
    17761 agatttatcc aaagtcgggc ggcaattttt atctaccaca ggataatcgc tacaatgcaa
    17821 gcgatgtagc cggctatata gttcaatatc ttgtttatcc gcactgagtt taatgctatc
    17881 caaccagcga ttattctctg gtttatattt ataggtgaat cctaaacgac gtttgtggtg
    17941 acgttcatca aaaaacttca catggctata gcgcaaccca taagggatcc ttggcttgaa
    18001 cactaagcca tctaaaatat tatccccttc ataaacatag ttcctaagtg ataagttaat
    18061 atcgtctttt gtatagtaag ctggcgtttg catatcacgg atatcgtagc gttgttttgt
    18121 atcttctaag attgcgccaa gataatgaga cgagttaaag tgatagccaa acttcataaa
    18181 aacagaatta ctcttgtaat ctaaagggtt tggtgcaatg cgatctttac cggtatattc
    18241 ttgggctgag agctgctcag tgcgataagg aatctgctca agctgtttgc gctcttcagg
    18301 cgtatattcc ggaaatgttc tcactgggaa attatcgcgg ttcaacttaa cccttgcacg
    18361 aggagtacaa tctaatgttg ggcaagtatc ttccacaata aaaaaagatc ctccaggagc
    18421 attctgtgcg gaatttgggt aaagatcgta gcgattttca aagccggtta tacgccgaat
    18481 attatgtttt aatttatttg cctcggaatg aattttggtc tctttaccgt gtcggtgagt
    18541 tgcaataaca agtgcttcaa aaccacccgc ctcaccagcc gctgcgatag actgtaaaaa
    18601 atggctattt ttgctggcat aagaggtctt actatctaag ccccaatgct gcccctcttt
    18661 aataatatcc tgcgcatctt tagtacgaaa accaatagca ccacctagcg caccagagcc
    18721 atattccgca gaacttgctc ctttgcttaa ctcaattgaa cgaatgtttt catactcaat
    18781 ctcattaatt gcaccaccat tagcatctga acctagcgta tgataatgct gcgcttgtgg
    18841 tagcccatca acaagtaagc tgacacggtt tttatctaca cctcgaatgg catagccact
    18901 acttgcaccg cgaccttgtt ccaccaccga aataccaggg tcatagcgag ttaaatcacg
    18961 aataccaaga atttgatttt tactcatttc gtgataattt ttcactactt tccccaagcc
    19021 agttacttcg ttttgacgtt cgtgagcata atggctctct gtcacaataa cttcatccag
    19081 aacagctaga tcgttatttt cttctatttt tttattttca gtcgcagcac cgtatgaatg
    19141 agaaagagca aataacactg ttaaggcaac aggtgaatag cgaaaatgat gatatttcat
    19201 tatcattaga tagggtctcc tttatttaaa ttttgcaaat ttttataaaa aattgcccgc
    19261 ttgctatcta caaccagcaa aggggaatta tgattatttt tctatttgac gttttccgcc
    19321 gaatgtaata ctgactctat ctttatccgt ttctgcacta tgtacaatac cacctaattc
    19381 cgtcgcctta gggccataaa agcccccttc aaattgagta tttatatgca ctaccgtgcc
    19441 accattcgta cttttcggat caagattaaa accagaattg cccgttttgg ctgtgcctgc
    19501 aaaaccattc cctttcagat tgccttcaag tgtcagcatt gggcgttctt caacaccatc
    19561 attagcaatc agcttgccat taattttttt attgacaaaa tctacatcga atagtgaacg
    19621 agtaccactt tcgctgttac ttggcgattc agcccctgcc gagccagatt tactgtacat
    19681 taccccgtcc caagtacctc gatattttac tgtccctgtt ggcaaatctg ccacagctgt
    19741 acgttctcct actaaatatt ggtgagcagt atcactatta tttccctcgc tataagtccc
    19801 aaatttgaca taatctaaat tattacagca gactgaaact cgatacgttt tatcatcaat
    19861 agtacgggta accaaatcat caaatttcat ctcggcaaag ctttttttgc cttccgcaat
    19921 aagtggaatc tgcttattgt taataatcaa atgtgtcgca ttcccgaaag tatccatctc
    19981 agatttattt aaatctttaa gtttaatttt gaaagcatca aaggcagatt cactatcatc
    20041 ttttttagca tctcgtttgc cagcaaaaac aacaaatacc gacttatcat cagctaagaa
    20101 tttaccggca agttcttgag ccttcccacc aaaaaatcca ccttcaagtg tcgtagagct
    20161 tttaccaaaa taaggatcat cggtattttt tgcgtttgct ttaccagaaa agcgattacc
    20221 tttaattttt gcatcaatat cgtaaattgt tgtaattttt tgctctttgc tacgactaac
    20281 atacccatta cgaaccaatg ttccagttaa agttttatta gcaaaatcag ccgtaaattc
    20341 tcctgtatgc cccattggtt tttcagaatc atcaacatta atatcgtaac tattttccgg
    20401 tgtggcgcca atattgatgc ctgcggaatt agaaaaatat ttactatctc tcccttttct
    20461 cgcatcggta gtaaaatccc aatatccttt ataagtagct ttttgagtag gtattgcttt
    20521 tgccggctct atacctaaat agtaaacata cccatgtgca cctgttctca aaatttcttt
    20581 aggctttatt tcaggttttg caccagaatg cagaacatag ccagaacgaa caaaattaaa
    20641 atctctagta tacaacttat gatttctatc atgagtatgg ctaaatccat cagcactact
    20701 accgtacgct ttaacctctt cttcatacgg aatttttgtc agatctccag taatctcttt
    20761 tatatcacca ataggggcta catcttcctt cccctgcgga aagagattac gacgcggaat
    20821 tttggctgaa aaaccaaacc ccggctgcaa taaagcttca gtttcagaag cgcttactgt
    20881 acgtcttgcg ttactattat catcttgtaa acttggcttt ttgggggtag tttgcgtttg
    20941 agattcaact ttggcagatt gaacatcaaa gcttccacca tttgaggaac aagcagcaag
    21001 tagcgccgca ttaagcagta
//
LOCUS       DANMCL010000046        20678 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.046, whole genome shotgun sequence.
ACCESSION   DANMCL010000046 DANMCL010000000
VERSION     DANMCL010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20678
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.046"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..701
                     /locus_tag="PXF40_001482"
     CDS             <1..701
                     /locus_tag="PXF40_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ribonuclease"
                     /protein_id="HDL5802813.1"
                     /translation="LVSLIVVIVLAIISQIFSFFDKKEPSKAQEKSTQSSQSHQVSTS
                     SLGNYDVQMKNDRLKQHIVDTDYYTLALSWSPAFCQKQKRNNHGKIPSHLEYQCGGSA
                     DFGWVIHGLWPQSGKARSVDEHPRYCQGDLPMVAEQTIKQYLPESPGATLLQGEWEKH
                     GACAFNQADDYFAKQKELFNQLKLPDTEMSKLALFNWMRANNPHLQNVYLGGSKDELY
                     ICYDKAFQPMDCPR"
     gene            701..1195
                     /locus_tag="PXF40_001483"
     CDS             701..1195
                     /locus_tag="PXF40_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HDL5802814.1"
                     /translation="MADLRQLKMQVQRQLKRDLERANHYFNTTFTPPSISYAVRGVKA
                     GVAYLERNEVRFNPVLLQENEQAFIRQVVPHELAHILVYQHFGRVQSHGKEWKMMMET
                     VLGVPAEIYHCFDTQSVQQQFSYQCACQTHQLSIRRHNAVMRDKKSYICRLCKTQLHF
                     VEKS"
     gene            1300..2580
                     /locus_tag="PXF40_001484"
     CDS             1300..2580
                     /locus_tag="PXF40_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005693148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HDL5802815.1"
                     /translation="METIVIVGGGAGGLELATYLGNKLGRKQKAKVVLIDRNATHLWK
                     PLLHEVATGTIDEGTDALSYRAHAKNHSFEFQQGTLVAVDREKKTVSLAPIYNDQNQL
                     LVKERHISYDKLVIAIGSKSNDFGTKGVAENCIFLDGSEQAKDFQKRMMELFLRFSHS
                     ENKDVKIAIVGGGATGIELSAELYHVVKNLNSYGFGKLNRASLKVTLIEAGPRLIPAL
                     PEKVSVSAFHELKKAGVSVRLGTMITEARPDGLMTRLGEKIEADIMVWAAGVKAPEIT
                     REFGFETNRLNQIEIKDTLQTTVDESVFVIGDCASLIQDGKPIPPRAQAAHQMATRCG
                     KNIVALIEGKEMKPFRFNDKGSLLSFSKFGTVGNLMGNLVSGDMFIEGKIARLAYLSL
                     YRMHQVALHGCVKTGLIVLVGQINRFLRPTMKLH"
     gene            complement(2667..3704)
                     /locus_tag="PXF40_001485"
     CDS             complement(2667..3704)
                     /locus_tag="PXF40_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5802816.1"
                     /translation="MNVLKLISLKSILIASGIFLSAQAAQAEGRLTVYCSVQNNVCEE
                     MTKQFSHKYNVETKFIHGGTGTIFGKVKAEASNPQADIWYGGTIEPHFQAGELGLLEA
                     YRSPKQAEILPQFKSLVESEQGKFTSIVYMLVLGLGVNTEKLAKLGIEAPKKWEDLSD
                     PRLKGEVQLPDPRSSGTTYTFMTTLSTLWGEEKTFDYLKKLNNNVSQYVKSTLVTSNL
                     ARGESAVTVGFVHSYATEKEKGAPIEAIIPEGKVGYALGGVSIIKNARNLDNAKLFMD
                     WVLSKEAQEIPWKKHGVYQTPTNINAEVAPQSTKAEALDFVEIDYQKAGSSEEGKRLI
                     DKWLAEIKLAN"
     gene            3926..4624
                     /locus_tag="PXF40_001486"
     CDS             3926..4624
                     /locus_tag="PXF40_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HDL5802817.1"
                     /translation="MENSWKYAFKLITPIFMGYFAAGVAYGMLATNAGMPAWFTIVMS
                     FTVVSGTAQYAAIPFFVSGVGAVSVFLSTLLMSLRFSFYTLNMMEHKPISKAKSLVAI
                     AGLTDEGFAVLSSLPKEQKQALFFKIAVLCVAYWTFSTIVGVLLGDSVANYIPHLDFA
                     LPCLFAILAYEQYKNQKQWKPIVIALIGFLLARQITETSVLLVAILVAIVIVALLPQS
                     SSIKLEKGVENEHK"
     gene            4635..4937
                     /locus_tag="PXF40_001487"
     CDS             4635..4937
                     /locus_tag="PXF40_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HDL5802818.1"
                     /translation="MFAALVLGSQICRFLPEFLPKKVLSSPILQKLNKMLPLVIMLLL
                     LLTSLNFPKNGEGFNLILAQILALIGVLGSYVWLKNTFLSVALGIFGVNVFLSLLG"
     gene            complement(5058..6359)
                     /locus_tag="PXF40_001488"
     CDS             complement(5058..6359)
                     /locus_tag="PXF40_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HDL5802819.1"
                     /translation="MSLFKFEERGSNARQEIIAGLTTFLAMVYSVIVVPGMLSQAGFP
                     AESVFIATCLVSGLGSILIGLWANAPMAIGCAISLTAFTAFSLVLGQQVSIPVALGAI
                     FLMGVVFTLISATGIRTWILRNLPSSIAHGAGIGIGLFLLIIAATNVKLVVNSGMDIP
                     VKLGDFTSFPVLVSLIGLAAIIGLEKLKVKGSILWVIIAITIVGLIFDPNVKYTGFFK
                     MPSFGENSQFLNLDIMGALNTAILPVVFALVMTAIFDATGTIRAVAGQAGLLDKDGQI
                     INGDKALTSDSFGSILSGLFGTAPAAVYIESAAGTAVGGKTGLTAVVVGIGFLFMLFF
                     QPLAFLVPSYATAPALMYVGLLMLSNVSKLDFSDFVGAMSGLVCAVFIVLTANIVTGI
                     MLGFATLVIGRLISGEANKLNLGTVIIAIILVAFYAFDLAI"
     gene            complement(6492..7466)
                     /gene="secF"
                     /locus_tag="PXF40_001489"
     CDS             complement(6492..7466)
                     /gene="secF"
                     /locus_tag="PXF40_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HDL5802820.1"
                     /translation="MAIENVQQDVAEIKLPYKLIPFMKYRYVGFIFSLIVTALCIFTI
                     ATKGFNWGLDFTGGTVIETQFSQPADLAKLRTELENSGYGNALVQTTGSQKDLMIRLA
                     ASAGDMSVGNKVMEMIHQKLDPNATIKSIEFVGPNVGEELTQGAIYATLATLAMLLIY
                     VGTRFEWRLAVGGIVALFHDVLVTIGIFSFLQIEIDLTFVAAILSVVGYSLNDSIVVF
                     DRVRENFSKVRRSSSIEIIDISLSQTLSRTLMTSVTTLFVVLALFYLGGPTLHSFSLA
                     LLIGIGFGTYSSIYIAIGVALQLGLKREHMVQPKVEKEGADQDAFIDY"
     gene            complement(7476..9317)
                     /gene="secD"
                     /locus_tag="PXF40_001490"
     CDS             complement(7476..9317)
                     /gene="secD"
                     /locus_tag="PXF40_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HDL5802821.1"
                     /translation="MLNRFPLWKNLMVIFVIAIGALYALPNLYGDDPSVQISGTRGQQ
                     ATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKISEALGNNYSVA
                     LNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRK
                     EKLQYQAVKKGENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQAL
                     SESRTMAIEQNLSILRKRVEELGVSEPTIQRQGADRIVVELPGVQDTARAKELLGATA
                     TLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSGTDE
                     RGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVI
                     NVATIQTRLGNQFQITGINSPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVK
                     QGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIGLMSLIGATLTMPGIAGI
                     VLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLY
                     GVGTGPVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI"
     gene            complement(9357..9650)
                     /gene="yajC"
                     /locus_tag="PXF40_001491"
     CDS             complement(9357..9650)
                     /gene="yajC"
                     /locus_tag="PXF40_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005713354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5802822.1"
                     /translation="MQQGGGMEMIFILIIFGAIFYFMIYRPQAKRQKQQRDLLASLTK
                     GDEVLTSGGLIGKITKVTADNDNIVIALNDTTEVTIKRDFVVAVLPKGSLKSL"
     gene            9851..10408
                     /locus_tag="PXF40_001492"
     CDS             9851..10408
                     /locus_tag="PXF40_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HDL5802823.1"
                     /translation="MKKLFAQAVIFGAFFASSAFAHNVQLNQALPAVSVAKDGELAVA
                     GGKVSYKNWHSSSLAGKVRVIHHFAGRSSVKEKNEDLMTAIKNAGFDRSKYQTVTIVN
                     ADDAIVGTGVFVKNSVENGKLDNPHSQVVLDQQGSVKKAWGLKEKESFIAVLDKSGKV
                     QFTSEGKLSAKQIQEVIGLVKTLTQ"
     gene            complement(10449..11417)
                     /locus_tag="PXF40_001493"
     CDS             complement(10449..11417)
                     /locus_tag="PXF40_001493"
                     /EC_number="5.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HDL5802824.1"
                     /translation="MKLFTLENAFLRITLSDVGASWLSCIVKMPNEEREVLVTTSAKN
                     WQKQTAFFGATIGRYANRIANAEYRLNGKTYQLAKNNGEHNLHGGELGADKIVWQLES
                     QSEQAVKFSYFFADGEEGFGGEVKAFVEYRLTENELQISFDAVANQDTPLCLTNHAYF
                     NLQGSETILDHELIINADGYLPVDASGIPNAPLKKVESTSFDFRNAKKIGQDLLADDD
                     QKAVKGYDHSFHLAKNSENPTACLAVEDLKMELRTSMPALQLYTGNWLKGQPNLTKGE
                     YEDYAGVALEPEFFPNSLNQPELLQFGGITKAGEEYHHTISYRFII"
     gene            complement(11543..12706)
                     /gene="galK"
                     /locus_tag="PXF40_001494"
     CDS             complement(11543..12706)
                     /gene="galK"
                     /locus_tag="PXF40_001494"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HDL5802825.1"
                     /translation="MKPQEIALQQFEQHFGYKAERTVFAPGRVNIIGEHTDYNDGFVM
                     PCAINYGTAVSFAKRSDNKWRVFAIDLNQQDEFDLSQAIEPSEQKWANYVRGVVKFIQ
                     AKHPEFKQGADLAITSDVPMSSGLSSSAALEVSIGKTAQLLGDLPLSLPQIALIGQEA
                     ENKFVGCNCGNMDQLTSALGQQDHLVMIDCRSLEITPTPVPQGYSIAIINSNVKHDLV
                     TGEYNSRREQCEFAAHFFGKAKLRDVTAEQFIERASELSEENELAYKRAKHIISENQR
                     VLEAVEALKANDMVKLGELMAQSHDSMRDDFEITCPEVDCLAEIAQQAIGKNGGARMT
                     GGGFGGCVVCLVPNDKVEDLRQAVANNYEKQTGIKETFHVCTASDGVRECPAR"
     gene            complement(12716..13762)
                     /gene="galT"
                     /locus_tag="PXF40_001495"
     CDS             complement(12716..13762)
                     /gene="galT"
                     /locus_tag="PXF40_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HDL5802826.1"
                     /translation="MSEFVLNDHPHRRFNPLKNQWILVSPHRAKRPWQGQQEEIVQDE
                     KPSYDPSCYLCPGNKRITGEQNPNYTKPFVFKNDFSALLPDTPAPIPNDDPLFQISHT
                     QGESRVICFSPDHSKTLPQLSIEEITDVVTVWQEQANELKEHYQWVQIFENKGSMMGC
                     SNPHPHGQIWASNFLPNEIAIEDECQAKYFAQYGSPLLLDYAQRELDKQERIVAETED
                     WIAVVPYWAAWPFETLLLPKAKQFKSITDLNEAEKADLALALKKLTTRYDNLFNISFP
                     YSMGFHFAPFNGKENAHWQLHAHFYPPLLRSATVRKFMVGYEMMAESQRDLTPEQAAE
                     RLNAVSDTKHYKDK"
     gene            13975..14826
                     /locus_tag="PXF40_001496"
     CDS             13975..14826
                     /locus_tag="PXF40_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HDL5802827.1"
                     /translation="MERLNKFDAWLMNHKPNARLSGASRLLTEFWFFGLKEARACLFA
                     GLFFIAMFSVPKTGLWGLPRYDILLIFAIVVQIAMVKLGLETWDELKAISLFHLVGFV
                     LEVFKTSSNIQSWAYPDFAYTKLFNVPLFTGFMYAAVGSYIIQAWRLFDLKIKSHLPY
                     WLATLTALMIYLNFFTHHYIGDYRWYIAAFALGLYARTFVFFTPYDITRKMPLLLSFF
                     LIGFFIWLAENIGTFAGIWRYPNQFGAWSMVHMSKWSAWALLVMMTFTIIVHLKHIKQ
                     TVRVSSD"
     gene            complement(14912..15997)
                     /locus_tag="PXF40_001497"
     CDS             complement(14912..15997)
                     /locus_tag="PXF40_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5802828.1"
                     /translation="MEYRYYITTALVIAVLQLFLFNFAKTVSWLFNLSSKNRKTVGIL
                     TFLVANGLVILHLTRTFALFRIMAFILVLLLFAFFISFFTACIYKIFNGNTTVNRWLK
                     IAYPFAFFGLLGLGYYNAYTPTVVHYSVKLDKPLEKPLRIGMASDLHLGKLFGTKQLD
                     QLAEIFNQQKVDLILLPGDIMDDNTEVYVADKMQPHLAKLKAPLGVYATLGNHDFFGA
                     QETIAKEITDAGITVLWDQTAEINGKFTLIGRNDDLVKNRPSAEQLLQNVNTKLPVIL
                     LDHRPTEIEQHAKLPIDIQVSGHAHKGQVFPASIITKLIYRLHYGYEKIGFGHYFVTS
                     GYGFWGVPMRLGSQSEVMIIDVEGENP"
     gene            complement(16019..16999)
                     /locus_tag="PXF40_001498"
     CDS             complement(16019..16999)
                     /locus_tag="PXF40_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5802829.1"
                     /translation="MLFDSIQFSIGVTLPTILLMLFGIFPRRRKFIDDTFCNMASKVV
                     FNFTLPPMIFLNMLKSPLDFSSQINLISTGVGGSILIYLWAEWWAARHIENRRYRCIF
                     TQGTFRTNAAILGIALILNAYGDKALAAASVYISCLVITFNVLAVITLTSSLSEKKVN
                     FGRLILSILRNPLILAVIAGLTFNYFELSHQIPTPLESAGKLMASLTLPLALICTGAS
                     INFKQLKQFNQGVESTINKIVLFSASIRLIFAPIFLLLLGKFVFQLPPMELGIVFVAA
                     SAPVASATYAMTRNYGGDGEAAANLIGITTLGSMFSASIGLFLLRQIGWV"
     gene            complement(17102..18200)
                     /gene="prfB"
                     /locus_tag="PXF40_001499"
     CDS             complement(join(17102..18124,18126..18200))
                     /gene="prfB"
                     /locus_tag="PXF40_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550889.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HDL5802830.1"
                     /translation="MFELNPIKNQLTDLSERTAVIRGYLDFEHKVERLEEVNAELEQP
                     DVWNKPEKAQALGKERAMLEQIVNTIKALEQGIEDVEGLIELAVEAEDQDTFNEAQVE
                     ADELEKKLADLEFKRMFSGPHDSADCYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKG
                     FKAELMEASDGDVAGIKSATVKISGDYAYGWFRTETGIHRLVRKSPFDANNGRHTSFS
                     AAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPSGIVVQCQN
                     GRSQHQNKDQAMKQLKAKLYELEMSKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DHRTGVEHRTTQQVLDGDLDKFVEASLKAGL"
     gene            18456..19364
                     /locus_tag="PXF40_001500"
     CDS             18456..19364
                     /locus_tag="PXF40_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HDL5802831.1"
                     /translation="MAKRPSDIDATLLQLEILRRIPKLPAKIDAKSLHQQLLDAGFER
                     DIRTVQRSLKMLCEHFDIECDERSKPFGYSWKIRSEGLALPILNEQQSLLLKLAEQQL
                     KYLLPANLMASMKPFFEQADRMVSGAKDKPEYQWLNKVCSTPTSLPLIPAKIKEEIFN
                     SVSQALFQNKLLKIEYQNQHGKKHQATIMPLAISQQGASIYLVCRYEGFDDNRLLALH
                     RIRKAEISTFSFERPKDFNLQAYQDAGHLGFGNGEKASLTFSISRDAGFHLTETPLAK
                     DQKILEESETHYRIQAIVADNDMLTW"
     gene            19665..20306
                     /locus_tag="PXF40_001501"
     CDS             19665..20306
                     /locus_tag="PXF40_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase 2C domain-containing
                     protein"
                     /protein_id="HDL5802832.1"
                     /translation="MPFQLTFCQQAGNQHQKNQDALFNGKAVYQWQLKNAESYLLDND
                     KVIFGVADGVSSHPRNHLASHYLMALLSQCQSLDSQWLRQAHGDFCEKLAKDYFGASC
                     TFVACELHHNGRGRMVNVGDSRAYKITANGEWQQLSFDHTILAEMKQKGLVKEGSNYA
                     SMYNGLTDCIVADFDADDFRIHIAEFQLEKGESILLCSDGLHEQLAPEAIQAI"
     gene            20473..>20678
                     /locus_tag="PXF40_001502"
     CDS             20473..>20678
                     /locus_tag="PXF40_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005637830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HDL5802833.1"
                     /translation="MKNDFHYAAELIRNADGILITAGAGMSVDSGLPDFRSVGGLWNS
                     YPPLKKFNLQFMQIATPLAYQERP"
BASE COUNT         5922 a         4264 c         4433 g         6059 t
ORIGIN      
        1 aattagtttc tttgattgtc gttattgtgt tggcaatcat ttctcaaatt tttagctttt
       61 ttgataaaaa agagccttca aaagcacaag aaaaatcgac ccagagtagt cagtctcatc
      121 aagtttcaac ttcatcacta gggaactatg atgtgcagat gaaaaacgac cgtttgaaac
      181 agcatattgt agataccgat tattacacct tagcgttgtc gtggtcgccg gcgttttgcc
      241 aaaaacaaaa gcgaaataat cacggtaaaa ttccgtctca tttggaatat caatgtggtg
      301 gctcagcgga ttttggttgg gttattcacg gcttatggcc gcaaagtggc aaggcaagaa
      361 gtgttgatga acaccctcgt tattgccaag gcgatttgcc gatggtggca gagcagacga
      421 ttaagcaata tttacctgaa tcgccggggg caactttgtt gcaaggcgaa tgggaaaaac
      481 acggtgcttg tgcctttaac caagcggatg attacttcgc caaacaaaaa gagctattta
      541 atcagctcaa attaccggat accgaaatgt ctaaattagc actgtttaac tggatgcgag
      601 ccaataaccc tcatttgcaa aatgtctatt tagggggtag caaagatgag ctgtatattt
      661 gctatgataa agcatttcaa ccaatggatt gcccacgcta atggcagatc ttcgccaact
      721 gaaaatgcag gttcagcgcc aattaaagcg tgatcttgaa cgtgcaaatc actattttaa
      781 taccactttt acgccaccaa gtattagcta tgcggtgcgt ggcgtaaaag ccggtgtggc
      841 ttatcttgaa cgcaacgaag tacggtttaa tcctgtgtta ttgcaagaaa atgaacaggc
      901 atttatccgc caagttgtgc cgcacgaact ggctcatatc ttggtttatc aacattttgg
      961 gcgggtacaa tctcatggta aagagtggaa aatgatgatg gaaaccgtac tgggtgtgcc
     1021 ggcggaaatt taccattgtt ttgataccca aagtgtgcaa cagcaattta gttaccaatg
     1081 tgcctgccag actcaccagc tttcgattcg ccgacacaat gccgtgatgc gagataaaaa
     1141 aagctatatt tgccgtttat gtaaaactca actccatttt gtagaaaaaa gttaatgtgg
     1201 agaaaagtta agagaatgtt acgatttagc tagacattcc tgtttaaacg cctacaattt
     1261 gccgtagttt ttatttttaa ttttatttcc ggagtattta tggaaacaat tgtaattgta
     1321 ggtggcggtg caggcggttt ggagcttgca acctatctag gcaacaaatt agggcgtaaa
     1381 caaaaggcaa aagtggtgct gattgaccgc aatgcaacgc atttatggaa accactgttg
     1441 cacgaggtgg caaccggtac tattgatgag ggaactgatg cgttaagcta tcgggctcac
     1501 gctaaaaatc atagttttga atttcagcaa ggtacgctgg tggcggtaga tagagagaag
     1561 aaaacggttt cactcgcccc gatttataat gatcaaaacc aacttctcgt taaagaacgc
     1621 catatcagtt atgacaaatt agtgatcgcg atcggcagta aatccaatga ttttggcacc
     1681 aaaggggttg cagaaaattg cattttctta gatggctcag agcaagcaaa agatttccaa
     1741 aaacgaatga tggagctgtt tttacgtttt tcacatagtg aaaataaaga tgtaaaaatt
     1801 gcgattgtgg gggggggagc aacaggtatt gagctttcag cggagcttta ccacgtggtg
     1861 aaaaatttaa attcttacgg ctttggtaaa ttaaaccgtg ccagcttgaa agtcacttta
     1921 attgaggcag gccctcgttt gattccggca ttaccggaga aagtgtcggt ttctgctttc
     1981 cacgaattga aaaaagcggg tgtttcggtg cgtttaggta cgatgattac cgaagctcgt
     2041 ccagatgggc taatgacccg tttaggtgag aaaattgagg cggatattat ggtttgggcg
     2101 gctggcgtga aagcccctga aattacccgt gaatttggtt ttgaaactaa ccgcttgaac
     2161 caaattgaga ttaaagacac gctacaaacc accgttgatg agtcagtgtt tgtcattggc
     2221 gattgtgcat cattaattca agatggcaag ccaattccac ccagagcaca agcagcccac
     2281 caaatggcaa cccgatgtgg taaaaatatt gtggcattga tagaaggaaa agagatgaag
     2341 ccgtttcgat ttaacgataa aggctcactg ctttccttct caaaattcgg cacggtgggt
     2401 aatttaatgg ggaatttagt gagcggtgat atgtttattg aaggtaaaat tgcccgcttg
     2461 gcttacctct cgctttatcg aatgcaccaa gtggcattac acggctgtgt caaaaccggc
     2521 ttgattgtgt tggtagggca aattaaccgt ttcttaagac caacaatgaa actacattaa
     2581 acaaaaatcc gcatcaaatg atgcggattt tttatggcaa aataacaagc ggttattttc
     2641 ttgcctattt ttgcaaatac tcacgcctag tttgctaatt taatttccgc caaccattta
     2701 tcaattaagc gtttgccctc ttcgctggaa cctgcttttt ggtaatcaat ttccacaaag
     2761 tctaacgctt cggctttggt tgattgtgga gcaacttcgg cgttgatgtt tgttggggtt
     2821 tggtaaacac cgtgtttttt ccaaggaatt tcctgtgctt cttttgaaag cacccaatcc
     2881 ataaagagtt tggcgttatc taaattacgg gcatttttga taatgctgac accgcctaac
     2941 gcatagccca ctttaccttc cggaataatg gcttcaatag gcgcaccttt ttctttttca
     3001 gtggcataac tatgtacaaa gcctaccgta accgcacttt caccacgagc aagattgctg
     3061 gtgactaggg tgcttttcac atattgcgaa acgttattgt tgagtttttt cagataatca
     3121 aaggttttct cttcgcccca taaggttgaa agagtggtca taaacgtata agtcgtgccg
     3181 gagctacgag gatcaggcag ttgtacttca ccttttaagc gaggatctga taaatcttcc
     3241 cattttttcg gtgcctcaat gcctagtttg gcgagttttt cggtattcac gcctaaccct
     3301 aatacaagca tataaacgat agaggtaaat ttaccttgtt cactttcaac taaggattta
     3361 aattgtggca gaatttcagc ttgttttggt gaacggtagg cttccagtaa gcctaattcg
     3421 cctgcttgaa agtgaggttc aatcgtgccg ccataccaaa tatctgcctg agggttcgat
     3481 gcttccgctt ttacttttcc gaaaattgta ccggttccgc cgtgaatgaa tttagtttcg
     3541 acattatatt tgtgtgaaaa ttgcttggtc atttcttcac aaacattatt ttgtaccgag
     3601 caataaacag ttaaacgacc ttctgcttgt gctgcttgag ctgataagaa aatgccagag
     3661 gcgattaaga tcgattttaa tgagattaat ttgagtacgt tcatcacttt cctgaaaaca
     3721 taaaataaaa ggtagtgaag tctagcattt caaagcgctg gttgaaaata gttaattgca
     3781 atgaagtagg gcaattgtgc ctattacttt aatatttacc aactatttgc aagttttagc
     3841 aaaaaataac cgcttgtagt agctcttgct attttgtcaa aattcagaat aataaatgcc
     3901 tttagtctaa tgttaaattt tagttatgga aaatagttgg aaatatgctt ttaaattaat
     3961 cacgccgatt tttatgggct attttgcggc aggggttgct tacggaatgc ttgccaccaa
     4021 tgccggaatg cctgcgtggt ttacgattgt aatgagtttt accgtggtat cggggacggc
     4081 acaatatgca gcgattccat tttttgtctc cggtgttggg gcggtgtcgg tctttctcag
     4141 tacgctttta atgagtctac gttttagttt ttacacctta aatatgatgg agcataagcc
     4201 gatatccaaa gcgaaaagtc tggtcgctat tgcaggttta actgatgaag gctttgcggt
     4261 gttatcttca ttaccgaaag agcaaaagca agcattattc tttaaaatcg ctgtgctatg
     4321 tgtggcttat tggacatttt ccacgattgt cggtgtgttg ttaggcgatt cagtggcgaa
     4381 ctatattccg catttggatt ttgctctgcc ttgtttgttt gcaattttag cctatgagca
     4441 atacaaaaac caaaaacaat ggaaaccgat tgtgattgcg ttaatcggat ttttacttgc
     4501 tcgtcagatt accgaaacca gcgtgttatt ggtggcaatt ttagtagcga ttgtcattgt
     4561 ggctttatta cctcaatctt cttcaatcaa actagagaaa ggagtagaaa atgagcacaa
     4621 atgatacttt gataatgttt gcagcattag tgctcggctc gcaaatttgt cgttttttgc
     4681 cggaattttt accgaaaaag gtgttatctt cgcccatttt gcaaaaatta aacaaaatgt
     4741 taccgcttgt gattatgctt ttattgcttt taacgagcct aaactttcct aaaaacgggg
     4801 aaggctttaa cttaatattg gcacaaattc tggctttaat aggcgtatta ggtagctatg
     4861 tttggcttaa aaataccttt ttaagcgtag cgttggggat tttcggtgtg aatgtatttt
     4921 tatccctgtt aggataaata ccaaaggtca ttttatagga gcgaaacacc ttcgctcaat
     4981 cattaacaga tgtggggcga aaaatttttc gccccttatt tatcacaagc ggtctttttc
     5041 tttcaatttt ttgcaaatta aatcgctaaa tcaaacgcat agaaggcaac taaaataatc
     5101 gcaataatta ctgtacctag gtttaattta ttggcttcgc ctgaaattaa gcgaccaatc
     5161 acaagggtgg cgaaacctag cataatgcct gtcacaatgt tggcggttaa tacgatgaac
     5221 accgcacaga ctaaacctga cattgcacct acaaaatcgc tgaaatctaa tttagagaca
     5281 ttacttagca ttaataagcc cacatacatt aatgccggtg cggtggcata gcttggtact
     5341 aagaatgcaa gaggttggaa gaacagcata aataagaaac cgataccaac cactacagcg
     5401 gttaaacctg ttttaccgcc aacggctgta cctgctgccg attcaatata cactgccgct
     5461 ggtgctgtac caaataagcc cgataaaatt gatccgaatg agtcagaagt tagggcttta
     5521 tcgccattga taatttgtcc gtctttatct aataaaccgg cttgccctgc aaccgcacgg
     5581 atagtacctg ttgcatcaaa aatagcggtc attactaacg caaacactac cggtaaaatg
     5641 gcggtattta atgctcccat aatatcaaga tttaggaatt gcgaattttc accaaaactc
     5701 ggcattttga aaaagcctgt gtattttacg ttagggtcaa aaattaaacc tacgatggta
     5761 atagcaataa tgacccataa aatactgcct tttactttca gcttttctaa cccgataatg
     5821 gcggctagac cgattaatga cactaaaacc ggaaatgaag tgaagtcccc taatttaacc
     5881 ggaatatcca taccgctatt gaccactaat ttaacgttag tggcggcaat aatcagtaag
     5941 aataaaccaa taccaattcc agcaccgtgg gcaatgctgc ttggcaaatt acgtaaaatc
     6001 caagtacgaa taccggtagc agaaatcaag gtaaatacta cgcccattaa gaaaatcgcc
     6061 ccgagtgcaa caggaataga aacttgttgc cctaatacta agctaaaggc agtaaaagca
     6121 gtaagtgaaa tcgcacaacc gattgccatt ggggcatttg cccataaacc gattaagata
     6181 gagccgagac ctgaaactaa acaggtggca ataaataccg attcggcagg aaagcctgct
     6241 tggcttagca ttcccggcac aacgatgacg gaataaacca tggctaaaaa ggtagttaaa
     6301 ccggcgatga tttcttgacg agcgtttgaa ccacgctcct caaatttaaa taacgacata
     6361 agaacctcaa aagaagaaaa tgaaagggga aattttagga tgcggaattt tacagaaatt
     6421 taaaataatt agcaaacgtt tgcgtaaaaa gtgaaagaaa agcaggaata aatcctgctt
     6481 ttgtttgatg gttagtaatc gatgaaagcg tcttgatctg ccccttcctt ttcaacttta
     6541 ggctgaacca tatgttcacg ttttagccca agttgtagtg ccacaccaat tgcaatgtag
     6601 atggatgaat aagtaccgaa accgataccg atcaataatg caagtgagaa actatgaagc
     6661 gttggaccac ctagatagaa taaggctagt accacaaaga gggtggttac tgatgtcatt
     6721 aaagtacgcg aaagtgtttg gctcaaggaa atatcgataa tttcaattga gctggagcga
     6781 cgaactttag aaaagttttc acgtacacgg tcaaacacca caattgagtc atttaacgag
     6841 taaccgacaa cagataaaat cgctgctaca aaggtcaagt caatttcaat ctgtaagaaa
     6901 gagaagattc cgatcgtcac taatacatcg tgaaataaag ccacaatacc gcctaccgct
     6961 aaacgccact caaaacgtgt tcccacgtaa ataagtagca tagcaagtgt tgccaaagtg
     7021 gcataaatag ccccttgggt tagctcttcc cccacgtttg ggccaacgaa ttcaatgctc
     7081 ttgatagtcg cattcggatc taatttttga tggatcatct ccatcacttt attcccaaca
     7141 gacatatcac cggcactggc ggcaagtcgg atcattaaat ctttttgact gcctgtggtt
     7201 tgcactaagg cattgccgta gccgctattt tcaagctccg tacgcagttt tgctaaatca
     7261 gcaggttgtg aaaattgagt ttcgattact gtcccgccgg taaaatctaa cccccagtta
     7321 aagccttttg tcgcaatagt aaaaatgcat aaagcagtta caatcagcga aaaaatgaat
     7381 ccgacatagc ggtatttcat aaaggggatt aatttataag gcagtttaat ttctgctaca
     7441 tcttgttgta cattttcaat agccattttt ccaccttaaa tccaaagttt cttcacgcgt
     7501 ttgccaccgt aaacccagtt tacaagcatt cgagtacctg taattgcggt aaacatagaa
     7561 ataattaccc ctaatgcaag cgttaccgca aagcctttta ccggacctgt acctacacca
     7621 taaagcacaa gagaagtcaa aatagtggtg aggttggagt caaaaatact tgagaatgcg
     7681 ccattataac cttcgtggat tgcttgttga attgggcgac cgttacgaat ctcttctttg
     7741 atccgctcgt agattagtac gttggcatca actgacatac ccacagcaag tacgataccg
     7801 gcaattcccg gcatagtaag ggttgcaccg attaatgaca ttaaaccaat cgttaagatc
     7861 atattcacaa tcaaggcaag agaggcaaat ataccaaata ctttataaaa ggctagacag
     7921 aacaggatcg ttaagcctaa gcctaaaata ctagcttcca taccttgttt aacattatct
     7981 gccccaagag aagcaccgat agtacgctct tccacaatca cgattggagc aatcaacgca
     8041 cctgaacgta ataataccgc aaggttttga gcttccgctg gtgaattaat ccctgtaatc
     8101 tggaattgat tacctaaacg ggtttgaatg gttgcaacgt taattacctc ttggtgtttt
     8161 tctaaaatga ctttaccgtt agcatcttta cgacctgaat ctttaaattc ggtataaagt
     8221 gttgccatcg gtttttggat tgccatttta gtaatttcac ccatcatctc gccgccttcg
     8281 gtatcgagtc ggatactcac ttgcggcaag ccacgctcat cagtgcctga ggttgcatca
     8341 ataatatgtt caccccctaa cgaaggttta cggcgtaata caactggctc gccatcacgg
     8401 gtgttttgca gtcctgaatc agccggcaca atgcctttcg ccgcagaggc cacattggct
     8461 tcggtattga ctaaccggaa ctcaagggtt gcagttgccc ctaaaagctc tttggcacga
     8521 gcggtatctt gcacacccgg taattcaact acgatacgat ctgcaccttg acgctgaatg
     8581 gtcggctcag aaacgcccaa ttcctcaaca cgtttacgca aaatagaaag gttttgttcg
     8641 attgccatcg tgcgagattc agaaagagct tgtgctgatg gcgttaaggt gactttatta
     8701 tcatttacca aaatatcaag cgttgggtga gagagacgca ctaaacgcac tgctttttcg
     8761 gcggtatcgt tatcggcaaa ttcaacctca gttgcaaaat tttcgccttt tttgaccgct
     8821 tgatattgca atttttcttt acggaaatca ctacgcaggc tgtcttgcaa agtgtcttgt
     8881 tgttttgcaa gcgccgtgtt catatccact tccattaaga aacgaacacc gccaagcaag
     8941 tccaagcctc gcttcatcgg gctaccgcca atgtcagaca accactgtgg cgttgctggt
     9001 gcaaggttta aggcaacaga gtagttattc cccaatgctt ctgagatttt ttctttggca
     9061 ggcaattgct gttcgctgct ttcgagacga accaaaatcg agccattttc taacacggca
     9121 gatttcggct gaatattcat tgctgaaagt gtggattgca cttgagacag tgtctcaggt
     9181 gtggcttgtt gcccacgagt accggaaatt tgtaccgaag gatcatcgcc atataaattt
     9241 ggaagggcat ataaagcacc aatggcgatc acgaagatca ccattaaatt cttccataga
     9301 gggaaacggt ttaacacaat aactccccga atgttaaagt tggataagag ggttgattaa
     9361 agtgatttta atgaaccttt tggtaacacc gcaacaacga aatcacgttt gatggtcact
     9421 tcagttgtgt catttaatgc aatcacgatg ttatcgttat cagcggtcac tttggtaatt
     9481 ttaccgatta aaccaccgct ggttaatact tcatcgcctt ttgtcaagct tgccagtaaa
     9541 tcacgttgtt gtttttggcg ttttgcctga ggacgataaa tcataaaata gaaaattgca
     9601 ccgaaaataa tcaggataaa gatcatttcc attccgccac cttgttgcat aaaaactcct
     9661 taaatgtttg agtggtataa aaataagtgt tataaaaaac gcctgttaaa ataccataaa
     9721 ttcaatgaat taacgagtag aaaaattcat cgaatgcttt tcttttaaac aaaaatttga
     9781 gtagaatcag cacttttagt ttaggattag gttcttggcg tgttcttgcg ctgacacaat
     9841 aggagaaaaa atgaaaaaat tattcgctca agcggttatt tttggggctt tttttgcaag
     9901 ttccgctttt gctcacaatg tgcaattaaa tcaagcatta cctgctgttt cggttgcaaa
     9961 agacggggaa ttggcagtgg caggtggaaa ggttagctat aaaaattggc attcatcatc
    10021 tctggcaggt aaagtccgtg ttattcatca ttttgccggt agaagttcgg tgaaagaaaa
    10081 aaatgaagat ttgatgacag caattaaaaa tgccggtttt gatcgctcga aataccaaac
    10141 ggtgacgatt gtaaatgctg atgatgcgat tgtcggcaca ggggtatttg tgaaaaatag
    10201 tgtggaaaac ggcaaacttg acaatcctca cagccaagta gtgttagacc agcaaggcag
    10261 tgtgaaaaaa gcgtggggct taaaagagaa agagagcttt attgcagtgc tggataaatc
    10321 gggtaaggta caatttacct ctgagggcaa actctctgca aaacagattc aagaagtgat
    10381 tgggttggtg aaaacattaa cgcaataacc agtgttttta tgggcggatt ttgtatccgc
    10441 ccatcattct agataataaa tcgataactt atcgtgtgat gatactcttc tcctgctttt
    10501 gttatcccgc caaattggag taattcaggc tggtttagtg aatttgggaa aaactcaggc
    10561 tctaatgcta caccagcgta atcttcatat tcgcctttag tcaaattagg ttgtcctttt
    10621 agccagttgc cggtgtaaag ttgtaatgct ggcatggagg tgcggagttc catttttaag
    10681 tcttccacgg ctaaacaagc ggtcggattt tcactatttt ttgcaagatg aaaggagtga
    10741 tcgtaacctt ttaccgcttt ttggtcgtca tcagccaata aatcttgccc aattttttta
    10801 gcattgcgga agtcaaaact ggtactctcc acttttttca gtggagcatt aggaataccg
    10861 ctggcatcaa ccggtaagta tccgtctgca ttaattatca gctcgtgatc taaaatcgtc
    10921 tctgaacctt gcaaattaaa ataggcgtga ttagttaagc aaagcggtgt atcttggtta
    10981 gcaacggcat caaagctgat ttgaagctca ttctctgtta agcgatactc cacaaaagct
    11041 ttcacttcgc cgccaaatcc ttcctcgcca tctgcaaaaa aataactaaa tttgaccgct
    11101 tgttcgcttt ggctttcaag ttgccacact attttatctg ccccaagctc gccaccgtgg
    11161 agattatgtt caccgttatt tttagcgagc tggtaggttt tgccgtttaa gcgatattcg
    11221 gcattggcaa tgcggttagc gtaacgccca atggtcgctc caaagaaagc ggtctgtttt
    11281 tgccaatttt ttgcagacgt ggtgactaat acttcccgtt cctcgttcgg cattttgaca
    11341 atgcacgaaa gccaagaagc cccaacatca gaaagggtaa tgcgtaaaaa cgcattttca
    11401 agggtgaata atttcatcgg ttgaccttaa ttacctagca cggcatagcc gtactaggtt
    11461 aagcataatt cagccctgct agggctgagg ttatttattt tagagtagcg gagctacttc
    11521 cttatgctta acccggtacg ctttagcgtg ccgggcattc tcgcacccca tcggaggcag
    11581 tacaaacgtg gaaggtttct ttaatgccgg tttgcttttc gtaattgtta gcaacggctt
    11641 ggcggagatc ttccactttg tcatttggca ctaggcacac gacacaaccg ccaaagccgc
    11701 cgccagtcat tctggctccg ccgtttttac cgatagcttg ttgggcgatt tcggctaagc
    11761 aatccacttc agggcaggtg atttcaaaat catcacgcat tgagtcgtga gattgagcca
    11821 tcaactcccc gagtttgacc atatcattcg cttttaaggc ctctactgct tccagaactc
    11881 gttgattttc gctgatgata tgttttgctc gtttatacgc cagctcattc tcttcactaa
    11941 gttctgaggc tcgttcaata aattgttccg ctgtgacatc acgcaatttt gctttgccga
    12001 agaagtgggc ggcaaattcg cactgttcac ggcgactgtt gtattcgccg gtaaccaagt
    12061 cgtgttttac gttggagtta ataatcgcaa tcgaatagcc ttgtggcaca ggggttgggg
    12121 tgatttctaa actacggcag tcgatcatca ctaaatgatc ttgttgcccg agagcggagg
    12181 tgagctgatc catattgccg cagttgcagc cgacaaattt attctcagcc tcttgcccga
    12241 ttaatgcgat ttgcggtaaa gaaagcggta aatcgccgag taattgagcg gttttaccaa
    12301 tcgacacttc caatgcggcg gaagaactta aacctgatga catcggcaca tcgctggtaa
    12361 tggctaaatc tgctccttgt ttgaattcgg ggtgtttggc ttgaataaat ttcaccacgc
    12421 cacgcacata attcgcccat ttttgctcgc ttggctcaat cgcctggctt aaatcaaatt
    12481 catcttgttg gttgagatca atggcgaaca cccgccattt gttgtcacta cgtttggcaa
    12541 agctaaccgc tgtgccgtaa ttgatggcac aaggcattac aaacccatcg ttgtaatcag
    12601 tatgttcgcc gataatattc actctgcccg gggcaaatac cgtgcgttct gctttataac
    12661 caaaatgttg ttcaaattgt tgcaaagcga tttcttgtgg tttcatttca attccttatt
    12721 tatctttata gtgtttggta tcacttactg catttaaacg ttcggcagct tgttccgggg
    12781 ttaaatcacg ttggctttct gccatcattt cataaccgac cataaattta cgcactgttg
    12841 ccgaacgcaa gagcggcgga tagaagtgag cgtgtaattg ccagtgagca ttttccttgc
    12901 cgttaaacgg agcgaagtga aagcccattg aataaggaaa gctgatgtta aacagattgt
    12961 cgtaacgggt ggtgagcttt ttcaatgcaa gggctaaatc cgctttttcc gcttcgttta
    13021 aatcggtaat ggatttgaac tgcttggctt tcggcaacag caaggtttca aacggccaag
    13081 ccgcccagta aggcacaacc gcaatccaat cttcggtttc tgccacaatt cgctcttgtt
    13141 tgtctaattc acgttgtgcg tagtcaagca acagtggcga gccatattga gcaaaatatt
    13201 tcgcttggca ttcgtcttca atcgcaattt cattaggtag aaaattactt gcccaaattt
    13261 gcccgtgtgg gtgagggtta gaacacccca tcattgagcc tttgttctca aaaatttgca
    13321 cccactgata atgctctttc agctcattcg cttgctcttg ccaaactgtt accacatcag
    13381 taatttcctc gatggaaagt tgcggtaagg ttttactatg atcaggcgaa aaacagatca
    13441 cacggctttc gccttgtgta tgagaaatct gaaacagcgg atcatcattc ggtattggtg
    13501 ccggtgtgtc tggtagcagg gcagagaagt cgtttttaaa cacaaacggc ttggtgtaat
    13561 tcgggttttg ttcgccggta atccgcttat tgccggggca gaggtaacaa cttgggtcgt
    13621 agctcggttt ttcatcttgc acgatttctt cttgttgccc ttgccacggg cgttttgccc
    13681 gatgcggaga gactaaaatc cattgatttt ttaatggatt aaaacgacga tgtgggtgat
    13741 cgttgaggac aaattcgctc atataaaact cctcgaaatt agttatgtaa agagtatagc
    13801 gaaagtcaga caaaatgact gtgacatagc tcacaaaata atgatgtcaa gcggtcaaat
    13861 ttcagaaaaa ttttgcaagt tttcctccat tttgcgattt aaggtagctt acgtggaatt
    13921 gaatgtggct tttggtagaa tagatgaata tgcaagatat taagacaaaa atagatggaa
    13981 agactgaata aatttgatgc ttggttaatg aatcataaac ctaatgctag gttaagcgga
    14041 gcgagtcgtt tgttgacaga gttttggttc tttgggttaa aagaagctag agcctgttta
    14101 tttgcgggat tattttttat tgcgatgttt tcggtaccaa aaacgggatt atggggctta
    14161 cctcgttatg atattttgct gatttttgcc atagtggtgc aaattgcaat ggtgaaactg
    14221 gggctggaaa cgtgggacga gctaaaagca ataagcctat ttcatttggt tggttttgtg
    14281 ttagaagtct ttaaaacatc gagtaatatt caatcttggg catatccgga ttttgcctat
    14341 actaaattgt tcaatgtgcc attatttact ggttttatgt atgcagcagt tggttcttac
    14401 attatccaag cgtggcggtt gtttgatttg aaaattaaaa gccacctgcc ctattggtta
    14461 gccactttaa cggcactgat gatttacctg aatttcttta cgcatcatta cattggggat
    14521 taccgttggt atattgccgc ttttgcatta gggctgtatg cacgtacttt tgtatttttc
    14581 accccttatg acattacacg aaaaatgcca ctgctgcttt ctttcttcct gataggtttt
    14641 ttcatttggt tggcggaaaa tatcggtacg tttgccggaa tttggcgcta cccgaatcag
    14701 tttggggctt ggtctatggt gcatatgagc aagtggagtg cttgggcgtt attggtgatg
    14761 atgactttta ccatcattgt gcatttaaag catatcaagc aaacagtcag agtctcgagc
    14821 gattaacaag ctgtgggttt tggcgaaaat tttactcatc agttattttc agtggaatta
    14881 ggggcaaata ataatttgcc cctatatcaa attatggatt ttccccttcc acatcaataa
    14941 tcatcacttc cgactgtgag cctaaccgca tcggcacgcc ccagaatccg tagccggagg
    15001 tgacaaaata atgcccgaag ccgatttttt catagccgta atgtaatcga tagatcagtt
    15061 tggtaataat acttgcaggg aacacttgcc ctttgtgagc gtgtcctgaa acttgaatat
    15121 caatcggcaa tttagcatgt tgctcaattt cagtcgggcg gtggtcaagc aaaattaccg
    15181 gtagtttagt gttcacgttt tgtaaaagct gttcggcaga aggtcgattt ttgactaaat
    15241 catcattacg cccaataagg gtaaattttc cgttaatttc ggccgtttga tcccataaaa
    15301 cagtaatacc ggcgtcggta atttcttttg caatcgtttc ttgagcccca aaaaagtcgt
    15361 gattgccaag ggtagcatac acgccaagag gagcttttaa tttggctaaa tgaggctgca
    15421 ttttatcggc aacataaact tcggtattgt cgtccataat atcgcccggc aataaaatca
    15481 gatcgacttt ttgctggttg aaaatctctg ccagttggtc aagttgcttg gttccgaaca
    15541 gttttcctaa atgcagatcg cttgccatac caatgcgaag cggtttctct aatggtttat
    15601 ccaatttcac cgaataatgt actactgttg gggtataagc gttgtaatag ccaagcccaa
    15661 gtaagccaaa gaatgcaaat gggtaggcga ttttcagcca gcgattgacg gtagtattgc
    15721 cgttgaatat tttgtaaata caagcggtga aaaaactgat aaaaaatgca aaaagtaaca
    15781 ataccaatat gaatgccatt attctaaata gcgcaaaagt acgagtaaga tgcaaaatca
    15841 ctaatccgtt tgcgactaag aaagtgagaa taccaactgt tttacggttt ttacttgata
    15901 aattaaataa ccagctgaca gtctttgcaa agttgaataa aaagagttgt aacaccgcaa
    15961 tcacaagggc ggtggtaatg tagtaacgat attccatatt tttccttcaa taaattggct
    16021 aaacccagcc gatttgtctt aataaaaata agccgatgct ggcactaaac attgagccga
    16081 gagtcgtaat gccgatcaga tttgcggctg cctcgccgtc tccgccatag ttgcgtgtca
    16141 ttgcgtaggt ggctgaagca acgggagcag aagcagccac aaagacaatg cctagttcca
    16201 tcggcggaag ttgaaacaca aatttcccga gtagtagcaa gaaaattgga gcaaaaatca
    16261 gccgaatcga ggcagaaaac agcacaattt tattgatggt gctttccact ccttgattaa
    16321 attgtttcaa ctgtttgaaa ttaatgcttg ctccggtgca gataagtgct aatggtagtg
    16381 tcaggctcgc cattaattta ccagcagact caagcggggt tggaatttgg tggcttaatt
    16441 caaaatagtt aaaagttaag cctgcaatga cggctagaat cagcggattt ctcaatatcg
    16501 acaatattaa tctgccaaaa ttcacttttt tctcgcttaa cgatgaagtg agggtaatca
    16561 ctgcaagcac attaaaggta atcaccaagc acgaaatata aactgaagcg gcagcgagag
    16621 ctttatcgcc ataagcattg agaattaagg caatgcctaa aatcgccgca ttggtacgga
    16681 aagtgccttg agtgaaaata caacgataac ggcggttttc aatatgtcga gccgcccacc
    16741 attccgccca taaatagatc aaaatcgaac cgccgactcc ggtcgagatc aggttgattt
    16801 ggctggagaa atctaacggg ctttttagca tattcaagaa aatcatcggt ggcagggtaa
    16861 aattaaatac cacctttgat gccatattgc aaaaggtatc gtcaataaat tttcgtctgc
    16921 gtggaaaaat accgaacagc attaacaaaa tggttggtaa ggtaacgcca atgctaaatt
    16981 ggatagagtc gaaaagcata atgtttgcct taaatgatgg cacgagtgtc ttttgcttgt
    17041 accgtagatt atcaataaag taccagcgtg gacgctggta ctatcatcaa tggaaatgaa
    17101 attacaatcc tgcctttaag cttgcttcga caaatttatc caaatcaccg tccagcactt
    17161 gttgggtggt gcgatgttcc acaccggtac ggtggtcttt aatccgtgaa tcgtctagca
    17221 cataagagcg gatctggctg ccccagccga tgtcggattt gttgtcttcc atcgcctgtt
    17281 tttccgcatt tttcttgctc atttccagct catatagctt cgctttaagc tgtttcatcg
    17341 cctgatcttt attttgatgt tgtgaacgac cgttctggca ctgcaccaca atgccgctcg
    17401 gtatatgggt aattcgcacc gccgattcgg ttttattgac gtgctgacca cccgcccctg
    17461 aggcacgata cacatcaatc cgcaaatccg cagggttgat ttcaatatca atatcgtcat
    17521 cgacttccgg ataaacgaaa gccgccgaga acgaggtatg acgaccgtta ttggcatcaa
    17581 acgggctttt acgcaccaag cggtgaatac ccgtttcggt tctgaaccag ccgtaagcat
    17641 agtcgccgga aattttcacg gtggcggatt taatccctgc cacatcaccg tctgaggctt
    17701 ccattagttc ggctttaaac cctttgctct ctgcccaacg caaatacata cgcagtaaca
    17761 tttctgtcca gtcctgagct tccgttccac ccgaaccggc ttgcaaatcc aaatagcaat
    17821 cggcactgtc gtgtgggccg ctgaacatcc gcttaaattc taaatcggca agttttttct
    17881 ctaattcgtc tgcttccact tgggcttcat tgaaggtatc ctgatcttct gcttccaccg
    17941 ccagctcaat caacccttca acatcttcaa tcccttgctc taaggcttta atcgtattga
    18001 cgatctgctc caacattgcc cgctctttac caagcgcttg tgctttttcc ggcttgttcc
    18061 atacatcggg ttgttccagc tcggcattga cctcttctaa gcgttcgact ttatgctcaa
    18121 agtcaaagat accccctgat caccgcggtg cgctcgctta aatcagttag ttggttttta
    18181 attgggttta attcaaacat tgtcgttcct gtttttgctt attttaaaaa gatgaattat
    18241 agctgaagtt aagcaagcgg tcgaattttg caagaaatgg agcaatgatc gtttctagta
    18301 atgagatttg gttcataaaa gttgcaactg tttctgctat ttggctttga tagctaaaaa
    18361 tctttaaaaa aacaagcggt cgttttaccc cattttttgc aaaacgaccg tagcttcttg
    18421 ctataatcgc tgaaaaaatg ctgcaaggag attttatggc aaagcgccca agtgatattg
    18481 atgcaaccct attgcaactg gaaatcctac gccgtatccc caaattaccc gctaaaattg
    18541 atgctaaaag tttgcaccaa cagctattag atgccggctt tgaacgggat attcgcactg
    18601 ttcagcgttc gctcaaaatg ttatgcgagc attttgatat tgaatgcgat gagcggagca
    18661 aaccctttgg ttatagctgg aaaatccgct cagaggggct ggcattgccg attctcaacg
    18721 aacaacaatc attactgcta aaacttgccg agcaacagct gaaatatctg ttacccgcaa
    18781 atttaatggc atcaatgaaa cccttttttg agcaggcaga cagaatggtt tccggggcga
    18841 aagacaagcc cgaataccaa tggctaaata aagtttgctc cacgccaacc agcctaccgc
    18901 tgatccctgc aaaaattaaa gaagagattt ttaattccgt aagccaagcc ttatttcaaa
    18961 ataagttgtt aaagatcgaa tatcagaacc agcacggcaa aaaacaccaa gcgacaatta
    19021 tgccgttggc gatttcacaa caaggtgcga gcatttattt ggtctgccgt tacgaagggt
    19081 ttgacgacaa ccgcctgttg gctcttcacc gcattcgtaa agcggagatt tctactttta
    19141 gttttgaacg cccgaaagat tttaatttgc aagcctacca agatgccgga cacctcggtt
    19201 ttggcaatgg cgaaaaagct agccttacct tttcgattag cagagacgcc ggtttccatt
    19261 taaccgaaac accgcttgcc aaagatcaaa aaattctcga ggagagtgaa actcactacc
    19321 gtattcaagc catagtcgct gataatgata tgctaacctg gtagctacgc aaatttggcg
    19381 aagatatttg ggatatcgag aaagaagcgc taaaataagc taaacaagcg gtcggttttg
    19441 tgggaatttt tgctaaatag tatcgaccgc tcctccctaa acagaccttt atcataaata
    19501 caactctttc aatcagatat tcttactgtc tattgatgaa cgattcgaat ttttctagtg
    19561 gttgaaattt aaactaattt tcttgctttt tggcattttt cagactttta attctctcca
    19621 ttagcctgtt tttttacgct ctttttcata aacaggaata accaatgcct tttcaactta
    19681 ctttctgcca acaagccggc aatcagcacc agaaaaatca agatgcactg tttaacggca
    19741 aagcggtgta ccaatggcaa cttaaaaatg ccgagagtta tctgctggat aacgacaaag
    19801 taatttttgg ggttgcggac ggcgtttcca gccaccctcg aaatcatctt gcctcacatt
    19861 atttaatggc gttactcagc caatgccaat cccttgatag ccaatggttg cgacaggctc
    19921 acggcgattt ttgcgaaaaa ttagcgaaag attattttgg tgcttcttgc acttttgttg
    19981 cttgtgaatt acaccataac ggcagagggc gtatggttaa tgtgggcgac agtcgagcct
    20041 ataaaattac ggcaaacggg gagtggcaac aactgagttt tgatcacacc atactggctg
    20101 aaatgaaaca gaaaggcttg gttaaggaag ggagcaacta tgcctcaatg tataacggct
    20161 taaccgattg tattgttgcc gattttgacg ccgatgattt ccgcattcat atagccgaat
    20221 ttcaactgga aaaaggcgag agcattttgc tctgttctga cggtttgcac gaacaactcg
    20281 ccccagaagc tattcaggcg atttaggacg gatacgaaag cccgtctcat cgtctgcaaa
    20341 tttgcagaaa aatggtaaaa atgcaccgct tgtatgacga tttttctgcg gtgatttgtg
    20401 aaattgtgta attaaaacga cattatttgt cgcattggtg cttaaaatcc gcataaaaca
    20461 gaggagaaaa aaatgaaaaa cgatttccat tatgccgctg aattaatccg caatgcagac
    20521 ggcattttaa ttaccgcagg ggctggaatg tcggtggaca gtggcttgcc cgatttccgt
    20581 agcgtgggag ggttatggaa ttcctaccca ccgctcaaaa aatttaattt gcaatttatg
    20641 cagattgcca caccgcttgc ctatcaggaa cgccctga
//
LOCUS       DANMCL010000047        20532 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.047, whole genome shotgun sequence.
ACCESSION   DANMCL010000047 DANMCL010000000
VERSION     DANMCL010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20532
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.047"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..924)
                     /locus_tag="PXF40_001503"
     CDS             complement(<1..924)
                     /locus_tag="PXF40_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HDL5802834.1"
                     /translation="MFSDNKALHLGKIYHLIEQFELISRTDLAKLSGLAPASVTNLTK
                     ILIDNHFILERTVQTTLSRGRPSVGLAVSNFFWQLLCVTVSSHKIEISLCKLNGAEIY
                     KQDYTISAENYPRLNDFILNFITNFRQLYCVNTSQLLAVSISVIGKINAEKDSITQLG
                     NKNIFCNITSKLSPLFHCPILLSEHFQLWLLAESTVGSLINQDNAIFLQLDDTVNLSV
                     LLSGSLLSKQSKMNVDNMLMPRFSHLSDEIFPELDEIHRYKLVNQVTFPAIVRLIDRY
                     LPNNLKSQEQKISWLCQKIDENQPLALAILSH"
     gene            1058..2176
                     /gene="rnd"
                     /locus_tag="PXF40_001504"
     CDS             1058..2176
                     /gene="rnd"
                     /locus_tag="PXF40_001504"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HDL5802835.1"
                     /translation="MESLIHYQWVETNEQLEAVCEQARKTKVVALDTEFIRTRTYYPI
                     LGLIQLFDGQQVSLIDPNTISDFSPFVSLLADKNIIKVLHACSEDLEVFEYQFKQLPE
                     PMLDTQVMAAFAGIGISMGFAKLVSHYLNIELDKGASRTDWLARPLSAEQLQYAAADV
                     WYLLPVYEKLAQALTKSTWQSAVAEECVALLKKAKQPINKEKAYKNIANAWRLNREEL
                     AILQVLAKWRIEEAQKRNLALNFVVKEASLVQIAKSCPKHTSSLLEFMHPNEVRIHGK
                     KILWLVEQGKAIESNDYPELIQRLVDEKGYKYYMQAMLQKLLEIQPLDIVPELVASKR
                     QLNQLFKWYIDGKPSEKIPELLIGWRKPFGEQLLSVLS"
     gene            2233..2715
                     /gene="lrp"
                     /locus_tag="PXF40_001505"
     CDS             2233..2715
                     /gene="lrp"
                     /locus_tag="PXF40_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005695827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HDL5802836.1"
                     /translation="MENKKPPKALDAIDLKILNELQRNGKISNIELSKRVGLSPTPCL
                     ERVKRLEKNNVIMGYKALLNPELLDAPLLVIVEITLVRGKPDVFEEFNKAIQQLDEIQ
                     ECHLVSGDFDYLLKTRVADMVSYRKLLGTTLLRLPGVNDTRTYVVMEEVKQTNYLLLK
                     "
     gene            2726..5386
                     /locus_tag="PXF40_001506"
     CDS             2726..5386
                     /locus_tag="PXF40_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HDL5802837.1"
                     /translation="MIEQLKPHLKGKENLIKLMLLLTGFLGVYLLIAWASYSPLDNAW
                     SVASSITQTTLNKTGHFGAWSIDMLYAMFGKVAVLVPIALIIFSIYSLGMGLSVDMKW
                     KTVFIRLASFLLLMVGLAGLFSVLFSNSAYYLSGGFVGGVWETILSDTIGQFGALLIA
                     MLFTIAGLYFCSVQSLLPILTQFYEWIMAKSEESKTAESLQHLQNTEQKQPLVTENEA
                     VEVVDDHKPQFTDISAFKRPNISGLRHSENVEIDNREMYEIERDLELPTINILIQPDM
                     VNQVAEQATSGYELPNEESNVLQMPTIRLNTAIENEVDTIENSSSLEDLKIAESMLPQ
                     IQLDNDIEDTEEAIDDVREITPEFMVTPPKAMKDVSEQPAYPKGYGDTLIHPLLQRKV
                     ITEKPTTPLPTLDLLDKAPIQSQQITEQEIRETSVRLEAELANFGVKATVEDVLVGPV
                     VTRYEIQPAAGVKASKITNLASDIARGLMFKAIRITEVIPNKPYMGIETPNKHRETVW
                     LRDVLDSDEFRNTTATLPMALGKDISGEPVVVDMAKMPHLLVAGQTGGGKSVGVNTMI
                     LSLLFKLTPEQVRFIMIDPKVVELSIYNDIPHLLTPVVTDMKKAANALRWAVEEMERR
                     YLLVSHLQVRNIEGYNAKIDQAAAMNLPIPDPTWRPGDSMDSLPPPLQKLSYIVLIVD
                     EFADLMMSAGKEVEEYIMRIAQKARAVGIHLILATQRPSTDVITGVIKANIPSRIAFT
                     VASQIDSRTILDSGGAEALLGRGDMLYSGAGSPDIIRIHGAFMKDEEVQRVADNWRAR
                     GKPNYLESIVESRSEEADGKNDGGTGDLDPLFDEVVEYITETGSVSISNIQRRFSLGF
                     NRAARIVDQMEAQGIVSEPLKGGKREVLAR"
     gene            5538..6377
                     /locus_tag="PXF40_001507"
     CDS             5538..6377
                     /locus_tag="PXF40_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HDL5802838.1"
                     /translation="MRLDDIKESKNVEDRRFNNVGRTKVGRGKGGILTFIIVLVGAYY
                     GVDLTGLMGGGVEYEEQTSALNESEEKQLRTLSAKVLTTTENIWTSYFQQNGLTYKEP
                     SLVLYRGAIQTACGTGQSAMGPFYCPVDQKVYLDLSFYDDMRKKLRASGDFAFSYVIA
                     HEVGHHVQNLLGITSKTQRAQMKASSKAEANQISVNVELQADCFAGVWGHQLAKANRL
                     EEGDVEEAFNAAQAVGDDRLQQQSRGYVVPDSFTHGSSAQRLAWFRKGLTTGNPAVCN
                     TFN"
     gene            6466..7548
                     /gene="aroG"
                     /locus_tag="PXF40_001508"
     CDS             6466..7548
                     /gene="aroG"
                     /locus_tag="PXF40_001508"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HDL5802839.1"
                     /translation="MSYIKNDDVRITSIEELLPPIALLEAYPASDVAAETVAKTRQSI
                     HKILHGADDRLLVVIGPCSIHDPKAALEYAQKIKAMRADPKINQNLEVVMRVYFEKPR
                     TTVGWKGLINDPYLNETFALNDGLRIARKVLSDINDLSVPTAGEFLDMITPQYVADFM
                     SWGAIGARTTESQVHRELASGLSCAVGFKNGTNGSVKIALDAISSAKSPHHFLSVTKF
                     GHSAIVSTAGNPDCHIILRGGDSATNYDADSVAAACAAIEKSGGRPHVMIDFSHANSQ
                     KQFKRQMDVCADVCNQIAGGSDFISGVMIESHLVEGRQDLIEGKGLEALVYGQSITDG
                     CIGWEDSEKALFALAEAVEKRRNFAK"
     gene            7635..8327
                     /gene="tsaB"
                     /locus_tag="PXF40_001509"
     CDS             7635..8327
                     /gene="tsaB"
                     /locus_tag="PXF40_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HDL5802840.1"
                     /translation="MKPSILALDTATEACSVALQYNGNITFLDEISPRSHTQRILPMV
                     DELLNQANIELKEVNYLVFGRGPGSFTGVRVGVSVAQGLAMGANLPVVAVSNLKAMAE
                     EAYQKLGATKVIALIDARMNEVYFAQFERKGEEWNEVVAEQVCSPEVAISQFQMSEET
                     VVVGTGWAAYSQFSEQNLPLVISDITLPSSRYMLSIAETEIQKGNIQSAFEIEPVYLR
                     NEVTWEKLPHKQ"
     gene            complement(8344..9153)
                     /locus_tag="PXF40_001510"
     CDS             complement(8344..9153)
                     /locus_tag="PXF40_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5802841.1"
                     /translation="MTMTVIIILIICGIIVNITSALFGIGGGVLMMPILHSLFPELPL
                     QVISACSLTIVIGSATINLCLFHHQQIKINRKNVLIWSLAMMLGVQIGFELSFLFSDN
                     SIIAIFILTLLTLSFKTLFHKPRVKAIVPPKPKEAVSNATMCSLGGLIAGITGIGGGS
                     IMAPIVTQIRSVSPKQVAVYTNYMMVIGGIGNLYGYLSRPFVLNSTLATWQIGYVNFA
                     IVGTVVISSLFTVYFSMKLRNILSPELTTKLLGVILFTIACYMGFLQYLFT"
     gene            9252..9803
                     /locus_tag="PXF40_001511"
     CDS             9252..9803
                     /locus_tag="PXF40_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HDL5802842.1"
                     /translation="MNNMPTPEQLMSCQLSVMSDLEKGVVIYSQGYHAREFYFLKSGL
                     IGLYHMLENGKESLVRVYKANDYFGFRTFFGDNRYHCSARVLQPAELIRITPLNFIEF
                     WSNNSALIISLLKQLSTELQDAEHRLSMVSYQKTQERVMNSIHYLHQRYPNYHWTNRE
                     IAEFAGCETETAIRLRRELKKIS"
     gene            9947..11644
                     /locus_tag="PXF40_001512"
     CDS             9947..11644
                     /locus_tag="PXF40_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="solute:sodium symporter family transporter"
                     /protein_id="HDL5802843.1"
                     /translation="MLLTIITFLVVTGLVGYISWLKTRNDDLSTSKGYFLAGRGLSAT
                     VIGCSMVLTSLSTEQLIGVNANSYAGNFSIIAWTVPAVIPLCFLALYLLPKYIRNGYT
                     TIPEFFENRFDRQTRLIMSGLFLVFYLFIVIPTALYTGAIAFNKIFNLETAFGLSYGA
                     AITYTVIAIGIVGAIYAIFGGLKAVAVSDTWNAVLLVIGALLVPVFALIYLGNGSMAE
                     GVKIITTTHVEKWNAVGSATDAVPWPTIFTGIMVVHFFYWTTNQAIVQRALGARDLKA
                     GQKGILIAALFLLLLPLILNLPGLLSFHILGEGLKPIDVSYPELVNKTFPTVLQGFFI
                     AALFGAILSTFNSFLNSAATIYCKDLLPSISKKQFTDAELISYAKKVSAVMAVITMIF
                     GPLLMFGTDGIFLLTKRFAGFVNIPIVALFVIGLFNKTVSGKAARIALLAHVILYFCI
                     VWVFDVKINFVYVQAGLFVFDVALMLILGIFLKRATPYEDNKINHANVDLTSWEYAPL
                     AVASIVLGLFTLYAFLSPLGLASPDGNPAMVLAVYAVLQAVVCVVFFAKCKGKKAVN"
     gene            11791..13239
                     /locus_tag="PXF40_001513"
     CDS             11791..13239
                     /locus_tag="PXF40_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HDL5802844.1"
                     /translation="MNNIIYILLDQVRKDMLGTYGHQVVKTPNLDRLAKDGIRFNNAF
                     TPASVCGPARTSLFTGLMPSSHGIIKNGEKGGTGEIPQQNPNIAGVEGYNSFVIGKWH
                     VGTKSVPEDYGIAGHNFDGYGYPGSQVYKNLVFNQPPTHSNRYREWLAEKGYDAPEVS
                     RAYFGDNPHLRVQELCGLLSGSREQTIEWFIIDEAKKYIQASLDEKKPFFAWINFWGP
                     HTPCVVPEPYYSMYDPSQVVLDESFFKPLEGKPNHFRTISQMWGMWEASEDRWKEVIS
                     KFWGYITLIDDAIGELFRFLEENNLYENTFLVATADHGDAMGAHKMIEKGEFMFETTY
                     NIPLIIKDPHSTRVNEVDDNLVYLHDLTSTVYDVANQPIPTAFQGESILPITRQSQNN
                     DRKGLLCQLAGHFVYFEQRMWRRKDYKLVFNATDRCELYDVRKDPEEMHNLFYDEAYQ
                     AVKKEMLEEMRQEMKRLNDPLENWVYRIIDEI"
     gene            13329..14447
                     /locus_tag="PXF40_001514"
     CDS             13329..14447
                     /locus_tag="PXF40_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HDL5802845.1"
                     /translation="MTTTYFHLMAKPSSFHCNIQCEYCFYLSKEQTIPPEKSQFMNDE
                     TLQNYIRHYIEANQSQRVDFVWQGGEPTLLGLDFYKQAVKYQQKFANGKQITNAIQTN
                     GIALNRQWASFFKENHFLVGLSIDGLSDIHDRYRISTNGKPTFERVKSAVDLLKEVGV
                     EFNTLTVVNDRNWQRGRETYQALKALGSRYMQFIPVVESHKGELQPFSVPPQGYGQFL
                     VDVFHEWLPDRGQIFVIEFDNLLGQWLGYPSNNCVFRPTCGSSLVVEACGDVYSCDHF
                     VYPDYHIGNLNQQQLAEIVSSAAQRQFGQNKQAKLSQACLNCKFRILCHGGCPKHRIV
                     PQANSENHNYLCPSYQQFFAETSSVMRQMSEQIRFAGK"
     gene            complement(14538..15119)
                     /locus_tag="PXF40_001515"
     CDS             complement(14538..15119)
                     /locus_tag="PXF40_001515"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014064645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HDL5802846.1"
                     /translation="MAKLYFYYSSMNAGKSTTLLQSSYNYQERGMNTLVYTAAIDDRF
                     GVGKVNSRIGISQEANLFTADTNLFAEIKALHSNKALHCILIDEAQFLTKTQVYQLSD
                     VVDKLKIPVLCYGLRTDFQAELFEGSKYLLAWADELEELKTICDCGKKAHFVVRLNEK
                     GEAIKDGEQIQIGGNDRYLSVCRYHYKQKLGKL"
     gene            complement(15175..15393)
                     /gene="zapB"
                     /locus_tag="PXF40_001516"
     CDS             complement(15175..15393)
                     /gene="zapB"
                     /locus_tag="PXF40_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011201404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapB"
                     /protein_id="HDL5802847.1"
                     /translation="MSLSVLDQLEEKIKQAVETIQLLQLEVEELKGKNDAAKQENDTL
                     RSEYEQLKVEQQNFQDRLRSLLGQIDNV"
     gene            15590..16608
                     /gene="glpX"
                     /locus_tag="PXF40_001517"
                     /pseudo
     CDS             15590..16608
                     /gene="glpX"
                     /locus_tag="PXF40_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484632.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
     gene            complement(16685..17008)
                     /locus_tag="PXF40_001518"
     CDS             complement(16685..17008)
                     /locus_tag="PXF40_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5802848.1"
                     /translation="MKLSSELQNQINQLNQLRKQALKQEQDEQKLFEKNKIEDLPHFG
                     TQLNAQRKLLGIELTTLEMQTGISSSTLKRLFKDPSQVKFQTICIVAETLGFNLCAIN
                     THKQE"
     gene            17224..18546
                     /gene="pepP"
                     /locus_tag="PXF40_001519"
     CDS             17224..18546
                     /gene="pepP"
                     /locus_tag="PXF40_001519"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HDL5802849.1"
                     /translation="MDLAYLAKMPQEEFTARRERVLEQMQDNSALLVFTESEKRRNSD
                     SEYLFRPDSYFWYLTGLAEPKSAVLLVKSEGKTESIIFVRKKDPLMETWNGRRLGIEE
                     APKTLQLNAAFDIDDIETVLAKKLENLTACYCALGIQEWGDNILFATFEKMKVNRQKV
                     PTTLIDWQPMLSEMRLIKSEFEIALIQQACHISSMAHIRAMKQARPNRYEWEIEGEIQ
                     HEFSRFGARFPAYNSIVAGGENACILHYNENDQVLKGGDLLLIDAGAEFAYYAGDITR
                     TFPINGKFSEPQKELYELTLTMQKEAINLLVPNSSIKAANDKAVQILTQGLVRLGILN
                     GDVESLIEQKAYRQFYMHGLGHWLGLDVHDVGDYGTERDRPLQIGMVLTVEPGIYIPK
                     DADVPEQYKGIGIRIEDNLLITEYGNKNLSSGCPKEIADVEQLMQSLN"
     gene            18662..18847
                     /locus_tag="PXF40_001520"
     CDS             18662..18847
                     /locus_tag="PXF40_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1508 domain-containing protein"
                     /protein_id="HDL5802850.1"
                     /translation="MYFEIYKDAKEEFRWRLKAGNHEVIATNQAYTTKQGCQKGIEAV
                     KKVTPETEVKDLTKAEA"
     gene            18976..20292
                     /gene="argA"
                     /locus_tag="PXF40_001521"
     CDS             18976..20292
                     /gene="argA"
                     /locus_tag="PXF40_001521"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HDL5802851.1"
                     /translation="MQNTELALAQWFRQSTPYVNMHRGKTFVIMLDGDVIESPNFVNI
                     INDISLLHSLNIKLVIVFGARPQINQLLKQNHIEPEYYHNIRVTNPQSLEYVKQAVGK
                     VHYDFFARLSLRLPHSEVINVVSGNMILAQPIGVVDGVDYTLSGKIRRINIESIKQQL
                     AQNSIVLLGPIAPSVTGEMFNLPFEDIATQVAIKLRADKLIGFCEEQGILDENGKPIP
                     DYLPQDGETLLQQLIERGEYHTPKARFLQAAITVCREGVKRSHLLSYKEDGSLLQELF
                     SRDGIGTQFSMESSEQVRIANSSDIPGLLDLIRPLEQQGILVKRSREQLEMEITNYTI
                     IERDGVVIACAALNPYPEEKMAEMACVAVHPDYRDSSRGDILLENIQKRAVQLGMEKL
                     FVLTTRTTQWFQERGFRLAGAQDLPRYKRENYNYQRRSKVLILPLW"
BASE COUNT         6239 a         3904 c         4516 g         5873 t
ORIGIN      
        1 atgcgataaa atagctaatg caagcggttg attttcatca attttttgac aaagccagct
       61 gattttctgt tcctgacttt ttaaattatt aggcaaataa cgatcaatga gtctcacaat
      121 agctgggaac gtcacctgat tgactaattt atagcgatga atttcatcta gttcagggaa
      181 tatttcatca ctgagatggc taaatctagg cataagcata ttatcaacat tcatctttga
      241 ttgtttagac agtaaactac cactaagcaa tacacttaga ttcacagtat catctaattg
      301 tagaaaaata gcattatctt ggttaattaa tgagccaacc gtagattctg caagcaacca
      361 cagctgaaaa tgttcactta ataaaatagg acaatgaaac agcggcgaga gtttagatgt
      421 aatgttacag aatatatttt tgtttcccaa ttgagtaata ctgtcttttt ctgcattaat
      481 tttaccgatc acactaatag atacagccag gagctgacta gtattaacac aatatagttg
      541 gcggaaattt gtaataaagt taagaataaa atcatttagc ctaggataat tttctgctga
      601 gattgtataa tcttgcttat aaatttctgc accattgagt ttacaaagtg aaatttcaat
      661 tttatgagat gaaacagtaa cacaaagtag ttgccaaaaa aaattagaaa cagctaatcc
      721 aacggagggg cgacctctgg ataaagtagt ctgaaccgta cgttctaaaa tgaagtggtt
      781 atctattagt attttagtca gatttgttac tgaagctggg gctaaccccg atagtttagc
      841 taaatctgtt cttgaaatga gttcaaattg ctcaattaaa tggtatattt tacccaaatg
      901 aagggctttg ttgtcagaaa acatttaaaa tccttatgtt agaattttta gatgacaatt
      961 attttttgat atgaaaaaaa taacaatctt tttttgttta taatgagaga cagatcacat
     1021 aattattttt tacgtttaaa tatttcagga aaagtatatg gagtctttga ttcactacca
     1081 atgggttgaa acaaatgagc aattagaggc cgtatgtgaa caggccagaa aaacaaaagt
     1141 agttgcctta gatacagagt ttatccgtac acgtacctat tatccgatat tgggtttaat
     1201 tcaactcttt gatggccaac aggttagcct tattgatcca aatacgattt ctgacttctc
     1261 gccttttgtg tcattattag ccgataaaaa tatcataaaa gtattacatg cctgtagtga
     1321 ggatttagaa gtttttgagt atcaatttaa gcaattgcca gagccgatgt tggatactca
     1381 ggtgatggca gcctttgccg gcattggtat ttcgatgggg tttgcaaaat tggtttccca
     1441 ctacttaaat attgaactag acaaaggcgc ttcccgaacc gattggcttg ccagaccgct
     1501 aagcgctgaa caattacaat atgcggcagc tgatgtttgg tatttattgc cagtttatga
     1561 gaaattggca caagcattaa caaaaagcac ttggcaaagt gctgtagcag aggagtgtgt
     1621 cgctttgttg aagaaagcga aacagcctat caataaggaa aaagcctata aaaatattgc
     1681 caatgcttgg cgattgaatc gggaagagtt agccatatta caagtattag cgaaatggcg
     1741 gattgaagaa gcacaaaagc gcaatcttgc cttaaatttt gtcgtgaagg aggcaagttt
     1801 agttcaaatc gcaaaaagct gtcctaaaca cacttcttcg ctgttagaat ttatgcaccc
     1861 aaatgaagtc agaattcacg gaaaaaaaat actatggttg gttgagcaag gaaaagcaat
     1921 agaatcgaat gattatcctg aactcattca gcgcttggtg gatgaaaagg gttataaata
     1981 ttatatgcaa gcgatgttgc aaaaattatt agaaattcaa ccgcttgata tcgtaccgga
     2041 gttggttgca agtaaacgtc aattaaatca gctatttaaa tggtatattg atggaaaacc
     2101 atcagaaaaa attcctgaat tattaatcgg ttggcgaaaa ccttttggtg aacagctgct
     2161 atcggtttta tcttaaattt cattcgggtt acatagacta tgtacagtat aattgcctaa
     2221 aaaggagttt atatggaaaa taaaaaacca ccaaaagcat tagatgcgat tgatttaaaa
     2281 atcttaaacg agctacaacg taacgggaaa atttctaata ttgaattatc aaagcgagtt
     2341 gggctttctc caacgccctg cttagaacgg gtaaaacggc tagaaaaaaa taacgtaatt
     2401 atgggctata aagctttact taaccctgaa ttacttgatg cccctttact ggtgattgtt
     2461 gaaattactt tggtgcgtgg taagcctgat gtatttgaag aatttaataa agcgattcaa
     2521 caacttgatg aaattcaaga atgccacctg gtatcggggg attttgatta tctgttaaaa
     2581 acccgtgtgg cggatatggt atcgtaccgt aagttattag gcacaacatt gcttcgtttg
     2641 cccggcgtaa atgacactcg aacctatgtg gtgatggaag aagtaaaaca aaccaactat
     2701 ttgttgttaa agtaaggaga attgggtgat tgaacaactt aaaccacacc taaaaggcaa
     2761 agagaacttg atcaaactta tgcttttgtt gaccggcttt ttgggcgttt atttgctaat
     2821 tgcttgggca agttatagtc cattagataa tgcttggtct gttgcaagca gcattacaca
     2881 aacaaccttg aataaaacag gtcactttgg tgcttggagt attgatatgc tctatgcaat
     2941 gtttggtaag gttgcagttt tagtacctat tgcattaatt attttctcaa tttatagctt
     3001 gggaatgggt ttaagtgtcg atatgaaatg gaaaactgtc ttcattcgcc tagccagttt
     3061 cttattattg atggtcggtc ttgccgggtt atttagcgtg cttttttcaa actcagctta
     3121 ttatctgtcg ggtggctttg tcggtggagt ttgggagaca atattatctg atactatcgg
     3181 acaatttggt gccttattga ttgcaatgct ttttactata gctggcttat atttttgctc
     3241 tgttcaatca ttattgccaa tattaacgca attttatgag tggataatgg caaaatcaga
     3301 agagagcaaa acagctgaat ctcttcagca tttgcaaaat actgagcaaa aacaaccgct
     3361 tgtaactgaa aatgaagcgg tggaagttgt agatgaccat aaaccgcaat ttaccgatat
     3421 ctccgccttt aaacgcccaa acattagtgg tttaagacac tcggaaaatg tagagataga
     3481 taaccgagaa atgtatgaaa ttgaaagaga tcttgagcta ccgactatta atattttaat
     3541 acagcctgat atggttaacc aagttgcgga acaagctaca tcgggctatg agttaccaaa
     3601 cgaagaatcc aatgtattgc aaatgccgac cattcgctta aataccgcta tcgaaaacga
     3661 ggtggataca atcgaaaaca gttcatcatt ggaagacctg aaaatagcag aatctatgtt
     3721 acctcaaatt cagcttgata atgatattga agatactgaa gaagctattg acgatgtgcg
     3781 tgaaattaca ccggaattta tggtaacgcc gcccaaggcg atgaaagatg tgtctgagca
     3841 gccagcctat ccaaaaggct atggtgatac gttaattcac ccgttgttac aacgaaaagt
     3901 gataaccgaa aaaccgacaa caccattgcc aacgctagat ttgttggata aagcaccgat
     3961 tcaaagccag caaattaccg aacaggaaat acgagaaacc tctgtgcggc tagaagcaga
     4021 attagcaaac tttggcgtaa aagctaccgt tgaagatgta ttggtcggtc cggtagtgac
     4081 ccgttatgaa atccaaccgg ctgccggggt aaaagcctcc aaaattacca atttagcgag
     4141 cgatatagct cgtggcttaa tgtttaaagc gattaggatt actgaagtta tcccaaacaa
     4201 accttatatg ggtattgaaa ctccgaataa acaccgtgaa acagtgtggt tgcgtgatgt
     4261 gctagacagc gatgaattcc gcaataccac tgcaacattg ccaatggcac taggtaaaga
     4321 catcagtggt gagcctgtgg tggtcgatat ggcgaaaatg ccacacttac tggtggcagg
     4381 gcagaccggt gggggtaaat cggttggggt gaatacgatg attttaagtc tattgttcaa
     4441 acttacacca gaacaagtcc gctttattat gattgaccct aaagtggtgg agctttccat
     4501 ttataacgat attcctcact tattaacgcc ggtagtaacc gatatgaaaa aagccgccaa
     4561 cgcactacgc tgggcggtgg aggaaatgga acgccgttat ttgctggtaa gccatttaca
     4621 ggtgcgtaat attgaaggct ataatgcgaa aatcgaccaa gcggcagcga tgaatttgcc
     4681 gattccagat ccaacgtggc gaccgggcga ttcaatggat agccttccgc ctccgctaca
     4741 aaaattaagc tatattgtgc tgattgtcga tgagtttgcg gatttaatga tgtctgccgg
     4801 taaagaagtg gaagagtaca ttatgcgaat tgctcaaaaa gcccgagcgg tgggaattca
     4861 cttaattctt gctacccaac gtccgtcaac cgatgtgatt accggcgtga ttaaagccaa
     4921 tattccaagc cggattgcgt ttacagtagc gagccaaatt gactcaagaa ctattttaga
     4981 ttcaggtgga gcagaggcat tattagggcg aggcgatatg ctctattcag gagctggcag
     5041 cccggatatt attcggatac acggtgcgtt tatgaaagac gaagaagtgc aacgcgtggc
     5101 ggataattgg cgggcaagag gaaaaccaaa ctacttggaa agcattgtgg aatcccgctc
     5161 ggaagaggct gatggcaaaa acgatggcgg aacgggcgat ttagatccgc tatttgacga
     5221 ggttgttgaa tatatcacgg aaaccggttc ggtctctatc agtaatattc aacgccgctt
     5281 ctcgcttggt tttaaccgtg cggctagaat tgtggatcaa atggaagctc aaggcattgt
     5341 ttctgagcca cttaaaggtg gcaaacgaga agtgctggcg aggtaaaaca catacaagcg
     5401 gttagatttc tgtgaaattt tgcaaatttt gacaaaaatc taaccgattg tatttatcta
     5461 atgctaaata agcatagtat aaggctagtc tttgggctaa aattaacgca atttttacat
     5521 cttttaaggt tgaatatatg cgattagatg atattaaaga aagtaaaaat gttgaagaca
     5581 gaagattcaa caatgtgggt agaactaagg ttggtagagg gaaaggtgga atattaacct
     5641 ttattatcgt gcttgttgga gcttattatg gtgttgactt aacaggttta atgggcggtg
     5701 gcgtagaata tgaggagcag acatcagcat taaatgaaag tgaagaaaaa cagctaagaa
     5761 ccttatccgc taaagtatta acgaccacag aaaatatttg gacttcctac ttccagcaaa
     5821 atggtctaac ttataaagag ccgtctttgg tgctttaccg tggggcaatt caaactgcct
     5881 gtggcaccgg tcaatctgca atgggtcctt tctattgccc tgtcgatcaa aaggtttatt
     5941 tagatttatc attctatgat gatatgcgta aaaaattaag agcatcgggc gattttgcct
     6001 tctcttacgt gattgcacac gaggttggcc accacgtcca aaatttattg ggcataacaa
     6061 gcaaaaccca acgggctcaa atgaaagcct catctaaagc cgaagcaaac caaatttcag
     6121 tcaatgtaga attgcaagct gactgttttg ccggcgtttg gggacaccaa ctcgcaaaag
     6181 ccaaccgatt agaggaaggc gatgtggaag aagcctttaa tgctgcccaa gcagttggag
     6241 atgaccgatt acagcaacaa agtcgtggct atgtcgtgcc ggatagcttc acccacggct
     6301 catctgcaca gcgtttggct tggtttagaa aaggtttaac cacaggaaat cctgcagttt
     6361 gtaatacatt taattaaaaa ataattaaat tatttgaaat ctttttatta tcgtactact
     6421 atgatagtac gattttattt tcattttatt tagagagtga acacaatgtc ttatatcaaa
     6481 aatgacgatg tcagaattac cagtattgaa gaattactac cacctattgc attactggaa
     6541 gcctatccgg caagtgatgt tgcagcggaa accgttgcta aaacccgtca atcaatccac
     6601 aaaattttac acggtgcgga tgatcgctta ttagtggtga ttggaccttg ctccattcac
     6661 gacccgaaag cggcattaga atatgcacaa aaaattaaag caatgcgtgc tgatccgaaa
     6721 attaaccaaa acttagaagt ggtgatgcgt gtctattttg aaaaaccccg tacaaccgtt
     6781 ggttggaaag gcttaattaa cgacccttat ttgaacgaaa cctttgcctt aaacgatggt
     6841 ttacgcattg cccgtaaagt attatctgat attaatgatt taagcgtgcc gactgccggc
     6901 gagtttttgg atatgattac accacaatat gtggctgact ttatgagctg gggagcaatt
     6961 ggggcgagaa cgactgaatc tcaagtccac cgtgaattag cctctggttt atcctgtgcg
     7021 gtaggtttta aaaacggcac gaatggtagt gtgaaaattg cattagatgc aatttcttcc
     7081 gcaaaatcgc cacaccattt cttatcggtc actaaattcg ggcattctgc gattgtttca
     7141 acagcaggaa atcctgactg tcacattatt ttgcgtggtg gcgatagcgc aaccaactac
     7201 gatgctgact ccgttgcagc ggcttgtgct gcgattgaga aatccggcgg acgtccacac
     7261 gtgatgatcg atttcagcca cgctaacagc cagaagcagt tcaaacgcca aatggacgtt
     7321 tgtgctgatg tgtgcaacca aattgcaggt ggatcagact ttatttcagg tgtgatgatt
     7381 gaaagccact tggtagaagg tcgccaagac ttaattgaag gcaaaggttt agaggcgtta
     7441 gtttacggac aaagtattac agacggctgc attggctggg aagatagtga aaaagcgtta
     7501 ttcgcacttg ctgaagcggt tgaaaagcgc agaaattttg caaaataatc ttttcttgaa
     7561 ccgagggcga atataattcg ccctttattt gtttaacctt aaagcaaatt taatttattc
     7621 aaactaaaca tatgatgaaa cccagcattc ttgctttaga tactgcaaca gaggcttgct
     7681 ctgtagcgtt acagtataac ggaaatatca cgttcttaga tgaaatcagc cctcgttccc
     7741 atactcaacg tattttgccg atggtagatg aattacttaa tcaagccaat atcgaactca
     7801 aagaagtaaa ttatttagta ttcggacgtg ggccgggcag ttttaccggt gtgagggtcg
     7861 gtgtaagtgt ggcacaaggg ttggcaatgg gagcgaattt gccggtggta gctgtttcta
     7921 acttaaaagc aatggcagaa gaagcatacc aaaaattagg tgcaacaaag gtaattgcct
     7981 taattgatgc ccgaatgaat gaagtttact ttgctcaatt tgaacgaaag ggtgaagaat
     8041 ggaatgaagt ggtggctgaa caagtctgtt cgccagaagt cgcaataagt caattccaaa
     8101 tgagtgaaga gactgtggtg gttggcacag gttgggcggc atattcgcaa ttttctgagc
     8161 aaaatctacc gcttgttatc agtgatatta ccttgccttc cagccgatat atgctttcga
     8221 ttgctgaaac tgagattcaa aaaggcaata tccaatctgc ttttgaaata gaaccggtgt
     8281 atttgcgtaa tgaagttact tgggaaaaac tacctcataa gcaataatct attgaactta
     8341 tggttaagtg aataaatatt gcaaaaagcc catataacag gcaatagtga ataggattac
     8401 accaagtaat ttagtagtta attcgggact caagatattg cgtaatttca ttgaaaaata
     8461 gacagtaaag agagaactta tcactacggt gccgacaatt gcaaaattca catagccgat
     8521 ttgccaagtt gctaaggttg aattcaacac aaaagggcgg gataagtagc catataaatt
     8581 gccgattccg ccaatcacca tcatatagtt agtataaact gcaacctgtt tcggtgaaac
     8641 cgagcgtatt tgcgtgacaa tcggagccat aatcgaaccg ccgccaatgc cggtaatacc
     8701 tgcaattaaa ccgcctaaac tgcacattgt ggcattagat actgcttctt ttggtttagg
     8761 tggtactatt gctttaactc ttggtttgtg aaatagggtt ttaaatgaaa gtgtcagcag
     8821 ggttagaata aagatagcga taatgctgtt atcagagaaa agaaaactga gttcaaaccc
     8881 aatttgtacg cctaacatca tcgcaagtga ccaaatcaac acattttttc gattgatttt
     8941 tatctgttga tggtggaata agcataaatt gatagtggct gaaccaatca caatggtaag
     9001 agagcaggcg gaaatcactt ggagaggcag ttcaggaaac agtgaatgta aaatcggcat
     9061 cattaaaaca cccccgccaa tcccaaatag tgcagaagtg atattgacta taatgccaca
     9121 aatgatcaaa ataattatca cggtcattgt cataatccat ctcctaaagt gtgataagta
     9181 tgcaaaattt tctaaataaa ggattatgat cgcaatcata tatggaaaaa ataaaataat
     9241 aaggataatc aatgaacaat atgccaaccc ccgaacaatt gatgtcttgc caattaagtg
     9301 taatgtctga tctagaaaaa ggagtcgtca tttattctca gggttatcac gccagagaat
     9361 tttatttttt aaaaagcgga ttaatagggc tgtaccatat gcttgaaaat ggtaaagaga
     9421 gcttggtgag ggtatataaa gccaacgatt attttgggtt tagaaccttt tttggcgata
     9481 atcgctacca ttgctcggct cgggtgttac agccggcaga attgatacgt attaccccct
     9541 taaatttcat tgagttttgg tcgaataatt ccgccttaat tatctctctg ttaaaacagc
     9601 tctcgacaga attacaagac gcagagcatc gtttatcaat ggtttcctat caaaaaacgc
     9661 aagagcgggt aatgaacagt attcattatt tacaccaacg ttatcccaat tatcactgga
     9721 ctaaccgtga aatcgccgaa tttgcaggtt gtgaaaccga aacagccatt cgattaaggc
     9781 gagaattaaa gaaaatcagt taaattgtca taaattattc atagttgtga tcaccatcac
     9841 atatctatta tgacaaacat catattctat cgttaaaaat aagatttatg ctattgccgt
     9901 ctctaatggg atatatcatt tatatagtca tattgaggtg aagaatatgt tattaacaat
     9961 aattaccttt ctggttgtaa ctggattagt cgggtatatc tcttggctaa aaaccagaaa
    10021 cgacgatctt tcgacatcta aaggttattt cttggcaggg cgtggcttga gtgctacggt
    10081 tatcggctgt tcgatggtct taacctccct ttctaccgag caacttatcg gcgtgaatgc
    10141 caactcttat gccggtaatt tctcaattat tgcgtggact gtgccggcgg taattccgct
    10201 ttgcttcttg gcactttatc tgttgccgaa atatatccgc aacggttata ccaccattcc
    10261 ggagttcttt gaaaaccgtt tcgaccgcca aacccgtttg attatgtcgg gcttgttttt
    10321 ggtgttctat cttttcatcg tcattccgac tgcactttac accggtgcga ttgccttcaa
    10381 taaaatcttc aaccttgaaa ctgccttcgg cttaagctat ggggcagcga ttacctatac
    10441 ggtgattgcg attggtattg ttggggcgat ttatgccatt ttcggtggct taaaagcggt
    10501 ggcggtgtca gacacttgga atgcggtctt gttagtcatt ggggcattat tagtgccggt
    10561 gtttgcactt atctatttag gtaatggcag tatggcagaa ggggtgaaaa tcatcaccac
    10621 tactcacgtt gaaaaatgga atgcggtggg tagtgccacc gatgcagtgc cttggccgac
    10681 cattttcacc ggtattatgg tggtgcattt cttctactgg acgaccaacc aagccattgt
    10741 gcaacgtgcc ttgggggcga gagacttaaa agccggtcaa aaagggatct taattgcggc
    10801 actgttctta ttattgctac cgcttatctt aaacttaccg ggcttactca gtttccatat
    10861 tttaggtgag ggcttgaaac cgattgatgt gtcttaccct gaattagtga ataaaacttt
    10921 cccaaccgtg ctacaaggct tctttattgc cgcactgttc ggggcgattt tgagtacctt
    10981 caactcgttc ttaaactcag cggcaaccat ttactgtaaa gacttactgc cgtctatcag
    11041 caaaaaacag ttcacagatg cggaactgat aagttatgcg aaaaaagtct ctgcggtaat
    11101 ggcggtgatt acgatgatct ttgggccgtt actgatgttc ggcacagacg gtattttctt
    11161 gctgaccaaa cgtttcgccg gttttgtgaa cattccgatt gtggcactgt ttgtcatcgg
    11221 cttattcaac aaaaccgtct caggcaaagc cgcacgcatt gccttactcg cacacgttat
    11281 tctctacttc tgcatcgttt gggtgtttga tgtaaaaatc aacttcgtgt atgtgcaagc
    11341 tggcttgttc gtgttcgatg tggcgttaat gctgatttta ggaattttcc taaaacgtgc
    11401 gactccatac gaagacaaca aaatcaacca cgccaatgtg gacttaacca gctgggaata
    11461 tgccccactg gcagtggctt ctatcgtgtt gggcttattc acgctatacg ctttcctctc
    11521 tccgctcggt ttagcctcac cagacggcaa tccggcaatg gtgctggcgg tgtatgctgt
    11581 gctacaagcg gtggtttgtg tcgtgttttt tgcaaaatgt aaaggcaaaa aggcggtgaa
    11641 ttaaatgaat gtgagccttc tcctcattag tataaaaata ccaagaacgg aaaaggctcg
    11701 agatcaaaaa tcccctcttt gctaaagagg ggaacagatc tccgaaactt gataatttat
    11761 cggttattaa caagccttaa agaggtcatt atgaataaca tcatctatat tttgttagat
    11821 caagtgcgta aagatatgct cggcacttac gggcatcagg tggtaaaaac cccgaatttg
    11881 gatcgcttgg cgaaagacgg cattcggttt aacaacgcct ttacgccggc ttcggtctgc
    11941 gggccggctc gcacctcgct gtttaccggc ttaatgccgt ccagccacgg gattatcaaa
    12001 aacggcgaaa aaggcggcac aggcgaaatt ccacaacaaa accctaatat tgccggcgtg
    12061 gagggctata actcctttgt gatcggcaaa tggcacgttg gtacaaaatc cgttcccgaa
    12121 gattatggca tcgccggtca taactttgac ggctatggct acccgggcag ccaagtgtat
    12181 aaaaacctcg tgtttaatca gccgccaaca cactccaacc gttatcgtga atggctggcg
    12241 gaaaagggct atgacgcacc cgaagtcagt cgagcctatt ttggcgacaa tccacacctg
    12301 cgtgtgcagg aactctgtgg tttgctttcc ggcagtcgcg agcagacaat agagtggttt
    12361 atcattgacg aggcgaaaaa atacattcaa gcctcccttg atgagaaaaa accgttcttt
    12421 gcgtggatca acttctgggg gccgcacact ccgtgtgtag tgccggagcc gtattattca
    12481 atgtatgacc caagccaagt ggtattggac gagagtttct tcaaaccgct tgagggcaaa
    12541 ccgaaccact tccgcaccat ttcacaaatg tggggaatgt gggaggcgag cgaagatcgt
    12601 tggaaagagg tgatttctaa attctggggc tacatcacgc tgattgacga tgccattggc
    12661 gagctgttcc gtttcttgga agagaacaat ctctatgaaa ataccttcct cgttgctacc
    12721 gccgaccacg gcgatgcgat gggggcgcat aagatgatcg aaaaaggcga gtttatgttt
    12781 gaaaccacct acaacattcc gctgattatt aaagatccgc actctacaag ggtgaacgaa
    12841 gtcgatgaca acctcgttta tttgcacgat ctcacttcca ccgtgtatga tgtggcaaat
    12901 caaccgatcc cgaccgcttt ccaaggcgag agtattctgc cgataaccag acaaagccaa
    12961 aacaacgacc gcaaaggctt gttgtgccaa ctggcagggc attttgtcta ttttgaacag
    13021 cgaatgtggc ggcgtaagga ttacaaattg gtcttcaacg ccaccgaccg ctgcgaactc
    13081 tacgatgtca gaaaagaccc cgaagagatg cacaacctct tttatgacga agcctaccaa
    13141 gccgtgaaaa aagagatgtt ggaagaaatg cgacaggaaa tgaaacgcct caacgaccca
    13201 ctggaaaatt gggtgtatcg gattattgat gagatataat tgtttgtaga ggcgggtttt
    13261 atacccgccc gaaaattaat gtaaacaatg ggcgaacata aagtccgccc ctacaattta
    13321 gagatacaat gaccaccacc tacttccacc taatggcaaa acccagcagt tttcactgta
    13381 atattcagtg cgagtactgt ttttatctga gcaaggaaca gaccattccg ccagaaaaat
    13441 cgcagtttat gaacgatgaa acgctgcaaa actacattcg tcattacatt gaagccaacc
    13501 aaagccaacg ggtggatttt gtgtggcagg ggggcgagcc gaccctgctg ggcttagatt
    13561 tctacaaaca agcggtcaaa tatcaacaaa aatttgcaaa cggcaagcag atcaccaacg
    13621 caatccaaac caacggcatt gccctaaacc gccagtgggc gagctttttc aaagagaatc
    13681 attttctggt gggcttatcc attgacggac tgagcgacat tcacgaccgc taccgcattt
    13741 ccaccaacgg taaaccgacc tttgaacggg tgaaaagtgc ggtcgattta ttgaaagagg
    13801 ttggcgtgga atttaacacc ctcacggtgg tgaacgaccg caactggcaa cggggcagag
    13861 aaacctatca agccctcaaa gccctcggta gccgttatat gcagttcatt ccggtggtgg
    13921 aaagccacaa gggggaatta caaccctttt ccgttccgcc ccaaggctac gggcaatttt
    13981 tagtggatgt ttttcacgaa tggctgcctg accgtgggca gatttttgtg atcgagtttg
    14041 ataacctgct cgggcaatgg cttggctatc cctccaacaa ctgtgtattc cgcccgacct
    14101 gtggcagctc gctggtggtg gaagcctgtg gcgatgtgta cagttgcgac catttcgtct
    14161 atcccgatta ccacatcggc aacctcaacc aacagcagct ggcagagatc gtctcatcag
    14221 ccgcccaacg ccaattcggg cagaataaac aggcaaaact ctcgcaagcc tgcctaaact
    14281 gcaaattccg catactttgc cacggcggct gccccaaaca ccgcatcgtc ccccaagcaa
    14341 acagcgaaaa ccacaactac ctttgcccct cttaccaaca gttttttgcc gagacttcga
    14401 gtgtgatgag acaaatgagt gagcaaattc ggtttgcagg aaagtaaaga gaggtaaata
    14461 acacaaacaa gcggttaaat ttcgctgaaa atttgcaaaa attcccgaaa atttaaccgc
    14521 ttgctgcttc ttgtagctta tagcttacct aacttttgtt tgtaatgata acggcaaaca
    14581 gagagatatc tatcattgcc gccgatttgt atttgttcac cgtctttaat ggcttcgcct
    14641 ttttcattta atcgaacgac aaaatgggct tttttgccac aatcacagat ggttttgagt
    14701 tcttccagct catctgccca agccaacaaa tatttgctac cttcaaataa ttcagcttgg
    14761 aaatcggtgc gtagcccgta gcaaagcacc ggaattttga gtttatcgac cacatcactt
    14821 aattgataaa cctgtgtttt agttaaaaac tgagcctcat caatcaagat acagtgtaac
    14881 gctttgtttg agtgtaatgc cttaatttcc gcaaatagat tggtatcagc ggtaaataaa
    14941 ttggcttctt gtgaaatacc gatacgagag ttgactttcc ccacaccgaa acggtcatca
    15001 atagcggcgg tataaactaa agtgttcatt ccacgttctt ggtaattata agaagattga
    15061 agcagagtag tagatttgcc tgcattcatt gaggagtagt aaaaatagag ttttgccata
    15121 gctgtaacaa ataaaaaacg gctaaaaatt tagccgtttg tgctgaaaat agaattaaac
    15181 gttgtcgatt tgacctaaaa gtgaacgtaa acgatcttgg aagttttgtt gttccacttt
    15241 taattgttca tattcgctgc gcaaggtgtc gttttcttgt ttcgctgcat cgtttttacc
    15301 ttttaattct tcaacttcta attgaagtaa ttgaatagtt tcaacagctt gtttaatttt
    15361 ttcttctaat tggtctaaaa ccgataatga catagtaaat tccctctaaa ataatataaa
    15421 aacttgtaaa gattatactc taaatctgac tttattttta taaaaaagtt tggctatttg
    15481 tgaattttta ttcaaacgct gattttttag taacgtagct tgcaggttac tgataaaata
    15541 taatctctct tcttttaaag tttttctttc aagaaactaa ggaacaaaaa tgaaacgaac
    15601 tctttctttt gaattttctc gtgttacgga agcagcggct ctagcagctt actcttggct
    15661 aggccgtggg gataaaaatg ccgctgatga agctgcggtg aaagcaatgc ggtttatgct
    15721 gaaccaaatg gaaatccgtg gcgaagtggt aattggtgag ggcgaaattg acgaagcacc
    15781 gatgctttat attggcgaga aaatcggtct atcccgccta gaagatgagg aaatcagtat
    15841 tgcggttgac ccgattgacg gtactcgtat gactgcaatg gggcaggcaa atgcgttgtc
    15901 ggtattagca gcaggcggca aagaaacctt tttaaaagcc cctgatatgt atatggaaaa
    15961 attagtggtg gggcaggaat gcaaaggaat gattgattta aatcttccgc ttgaacaaaa
    16021 tcttcgccgt gtcgcctcga aaaagggcaa attactttcc caattaacca ttgctatctt
    16081 gctaagcctc gccacgaaaa aataattgcc gatgtgcaaa aattaggggt aagagtgatt
    16141 gcgattcctg atggcgatgt tgcggctgcg gtgcaatgct gtttgccaga gagcgaattg
    16201 gatctgcttt atggtatcgg cggagcacct gaaggggtag tggcgggggc tgcggttcgt
    16261 gcattgggtg gcgatatgca agcacgttta attcctcgca accaagtgaa ggggaatagc
    16321 ccggaaaatt taactgctac cgaaaaagag cttttacgct gtaatgaaat gaatgtaccg
    16381 gtgaatacgg tgttgaaatt agaagatttg gtgcgtgatg acaatatcgt ctttgttgca
    16441 accggcatta cttcaggtga attgttaaaa gggattaaac gtagaggcaa tattgccagc
    16501 actgaaacct tacttattcg tggcaaatct agaaccattc gtaaaattca atccgaccat
    16561 tatgtcgatc gtaaagataa cgaactcctt tctttattgg atttatagct tttctctgat
    16621 aaatcgggct tttagcccga ttttttgtct tcccaaagta atcaaaatca ctacattgtc
    16681 acgcttactc ttgtttgtga gtattaattg cacataaatt aaagccgagt gtttctgcca
    16741 caatacaaat tgtctgaaat ttcacttggc ttgggtcttt aaataagcgt tttagggtag
    16801 agcttgaaat gccggtttgc atttcaaggg tggttaattc tatgcctaat agtttcctct
    16861 gagcattaag ctgcgtgcca aaatgtggca aatcttcaat tttatttttt tcaaacaatt
    16921 tctgctcgtc ttgctcttgt ttgagtgcct gttttcgtaa ctgatttagt tggtttatct
    16981 gattttgtag ttcgcttgat agtttcattt tatttttgag ctaaaagtag attatttatg
    17041 tgttcatagg ttaaatataa cctgtttaga tatgtaaagg ttatatttaa tcttaatctg
    17101 ttttgttttt gcaatcaaga tctcaaatat aatctttcat ctgttttggt taggctgaat
    17161 ttatgctgcg tttgtgctaa aataaggcag gtttcgatat agatataata aaaaggagaa
    17221 ataatggatc tcgcttattt ggctaaaatg ccacaagaag aatttaccgc acgccgtgag
    17281 cgtgtgcttg agcaaatgca ggataattct gcgttattgg tttttaccga atcggaaaaa
    17341 cgccgtaata gtgactctga atacttgttt agacctgata gttacttttg gtatttaacc
    17401 ggtttggcag aacctaaatc agccgtattg ctggtaaaaa gcgaaggtaa aacggaaagt
    17461 attatttttg tgcgtaaaaa agacccttta atggaaacct ggaatggcag acgtttaggg
    17521 attgaggaag ctccaaaaac gttacagctt aacgcagctt ttgatattga tgacattgaa
    17581 accgttcttg caaaaaaatt agaaaatctg accgcttgtt attgtgcgtt agggatacaa
    17641 gagtggggcg ataatatttt gtttgcaaca tttgaaaaaa tgaaagtcaa tcggcaaaaa
    17701 gtgccgacaa ccttgattga ttggcagcca atgttatcgg aaatgcggtt gattaaatca
    17761 gaatttgaaa ttgccttaat tcagcaggcg tgtcatattt cttcaatggc acatattcga
    17821 gcgatgaaac aagctcgccc gaatcgttat gagtgggaaa ttgaggggga aattcaacac
    17881 gaatttagcc gttttggagc aaggtttccg gcatataatt caatcgttgc cggcggtgag
    17941 aatgcctgta ttcttcacta caatgaaaat gatcaggtgc ttaaaggcgg cgatttatta
    18001 ctgattgatg caggggcgga atttgcgtat tacgccggcg atattacccg aaccttccct
    18061 attaatggga aattctccga accgcaaaaa gagctgtacg aattaacctt aactatgcaa
    18121 aaagaggcga ttaatcttct tgtgccaaac agctcgatta aagcggcaaa cgataaggct
    18181 gtacagattc tcacgcaggg cttggttcgc ttaggaattt taaacggtga tgtggaaagc
    18241 ctgattgagc aaaaagccta tcgccaattt tatatgcacg gattagggca ttggctaggg
    18301 ctagatgttc acgatgtggg ggattacggc acggagcggg atcgtccttt gcagattggt
    18361 atggtgttaa ctgttgaacc cggtatctat attcctaaag atgcggatgt accggagcaa
    18421 tataaaggta ttgggattcg gattgaagat aatttgctga ttaccgaata cggcaacaaa
    18481 aacttaagca gcggttgccc taaagaaatt gcggatgttg agcagttgat gcaatcgtta
    18541 aattaattcg caaatttttg taaaaaaatg accgcttgct ttgatatttt ggggaattta
    18601 gcttaagcta acccgacaca aacacagtgt ttgggcaatc acaacacgaa ggagtgttta
    18661 tatgtatttt gaaatttaca aagatgcaaa agaagaattt cgttggcgtt taaaagcggg
    18721 taaccacgaa gttattgcaa ccaaccaagc ttatacgact aagcaaggtt gtcaaaaagg
    18781 cattgaagca gttaaaaaag ttacacctga aacagaagta aaagatttaa ccaaagctga
    18841 agcataatct ataaagccct gatattattt cagggctttg ttatttatgc aaatataatg
    18901 cttaattatt caatttaagg cttgcggatt tttctaaaaa agataatatg cgtttatatt
    18961 ataaagagga aatatatgca aaacacagaa ctcgcattag ctcaatggtt taggcaatct
    19021 acaccttatg ttaatatgca cagaggcaaa acctttgtga ttatgcttga tggcgatgtt
    19081 atcgaaagcc cgaattttgt caatattatc aatgacatca gtctcctgca cagcctgaat
    19141 atcaaattag tgattgtatt tggggcaaga ccgcaaatta accaattgtt aaaacaaaat
    19201 catattgagc cggagtatta ccacaatatc cgtgtgacta atccacaatc gctagaatat
    19261 gtgaaacaag cggtagggaa agttcattat gatttctttg cccgcctttc tttgcgttta
    19321 ccccattctg aagtgattaa tgtagtcagt ggtaatatga ttttagctca gccgattggc
    19381 gtggtggatg gggtagatta tacactaagc ggtaaaatcc gtcgtattaa tattgagagc
    19441 attaagcagc aactggcaca aaattcgatt gtattacttg gtccgattgc cccgtctgtt
    19501 accggtgaaa tgtttaatct gccgtttgaa gatattgcca cacaggttgc aattaaactt
    19561 cgtgccgata aattaatcgg tttttgtgaa gagcagggga ttttagatga aaacggcaag
    19621 ccaattccag attatcttcc gcaagatggc gaaaccttgt tacagcagtt aatcgagcgt
    19681 ggcgaatatc acaccccgaa agctcggttt ttgcaggcgg cgatcacggt atgccgagag
    19741 ggagtgaaac gctcgcattt attaagctat aaagaagatg gctcattgct tcaagagtta
    19801 ttctctcgtg atggtattgg cacacagttc tcaatggaaa gctcggaaca ggtacgtatt
    19861 gctaattcca gtgatattcc gggattattg gatttaatcc gcccacttga acagcagggc
    19921 attttagtca aacgctctcg agaacaatta gaaatggaaa tcacaaacta caccattatt
    19981 gagcgtgatg gtgtggtgat tgcttgtgcg gcacttaacc cgtatccgga agaaaaaatg
    20041 gcggaaatgg cgtgtgtggc ggttcaccct gattatcgtg attcctcaag aggggatatt
    20101 ctactggaaa atattcaaaa acgggcagtg caactgggaa tggagaaact ctttgtgctg
    20161 actacaagaa ccacacaatg gttccaagag cgaggattta ggctggcagg tgcccaagat
    20221 ttacctcgct ataaacggga aaattacaat tatcaacgtc gttctaaagt attaatttta
    20281 ccactttggt aaaatattca atgtttttga ccgcttgtta ccaagagaac tataaaagga
    20341 gaactatgaa aaaacatcaa cccatcaaag gggctatggc aattattact gctgtagaag
    20401 atcagacttg atctgacaat tcactctaaa aagtgagagt ttcccgttta gaatatgagt
    20461 gtcaaaaatc aatctaaaca aaaaggaaac tctcatgttt tattctaaca accctctcat
    20521 taaacacaag ac
//
LOCUS       DANMCL010000048        20448 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.048, whole genome shotgun sequence.
ACCESSION   DANMCL010000048 DANMCL010000000
VERSION     DANMCL010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20448)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20448)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20448
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.048"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            83..3154
                     /gene="fdnG"
                     /locus_tag="PXF40_001522"
     CDS             83..3154
                     /gene="fdnG"
                     /locus_tag="PXF40_001522"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014550636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:668..670,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HDL5802852.1"
                     /translation="MQISRRKFFKVCAGGMAGTSAAMLGFAPATALAAPREYKLLRAK
                     ETRQTCTYCAVGCGMIMYSLGGEAMNSKGKLIHIEGDSDHPVSRGALCPKGAGALDYV
                     NSDRRVHYPEVREAGSSEWKRISWHEAIERIARHMKNDRDENFVTHNEAGLEVNRWMT
                     AGFLAGSACSNETGIVTQKFIRSLGMIFTDNQASIUHGPTVASLAPSFGRGAMTNHWV
                     DIKNSDLVIVMGGNAAEAHPVGFRWAVEAKKQNGAKLMVVDPRFNRSAAVADIYIPLR
                     PGTDIAFLLGAVNYLLKNDKIQHEYVKHYTNATFLLNEGFKFEDGLFTGYDEATRTYK
                     DKSTWAYQLDEQGQPKRDMTMQDPRCVINMLKDHVSRYTPEMVERITGTPQKDFLIFC
                     EEIAKTSAPDKAATFLYALGWTQHTVGAQNIRSMAIIQLLCGNIGVSGGGVNALRGHS
                     NVQGITDLGLFPHMLPGYIRLPTEADATLESYLNAIAPKTLVAGQVNYGQNNPKFAVS
                     MLKTFYGDKATKENEFGYHYLPKYPKGGTDHFRFIEQMYQGKVNGYFCQGMNPIASYP
                     NSQKLIKALSNLKYLVIFDPLITDTSEFWKNHGEFNNVNPSEIQTEVFRLPTTCFAEE
                     DGSIANSGRWLQWHWKAADAPHEAKPDVDILSEIRAELIHLYHKEGGKAPLEPLEAMT
                     WNYMNPLEPKPEEIAKENNRYALEDLKDADGNIIVKKGELLSSFTQMRDDGTTSGGCW
                     IYCGQWTPKGNQMANRDNSDPSGLGNTLGWAFSWPVNRRILYNRASADLSGKPWNPKR
                     QLVKWNGKNWNYVDVADYGTAPPNSPVTPFIMQPEGVSGLFVRERMQDGPFPEHYEPF
                     ETPIGTNPLHPNVISSPVARILPSDKEDLGTSDEFPYVGTTYRLTEHFHYWTKNALIN
                     VIAQPEQFVEIGEKLAEEKGIKNGDKVRVWSKRGEIKAVAVVTKRIRSLVSDGKPIHT
                     IGVPIHWGFAATTGAKKGYFANNLTVRTGEPNSNTPESKCMLLNIEKIVGA"
     gene            3157..4071
                     /gene="fdxH"
                     /locus_tag="PXF40_001523"
     CDS             3157..4071
                     /gene="fdxH"
                     /locus_tag="PXF40_001523"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HDL5802853.1"
                     /translation="MSTVQTQNIIKISATSALTPAPQARSHQVEVAKLIDVTTCIGCK
                     ACQVGCSEWNDIRSDVNANCVGVYDNPADLNAKAWTVMRFNEVEENDRLEWLIRKDGC
                     MHCAEPGCLKSCPSPGAIIQYANGIVDFQSDKCIGCGYCIAGCPFNIPRMNPDDNRVY
                     KCTLCVDRVNVGQEPACVKTCPTGAIRFGSKEEMKFYAEQRIADLKSRGYENAGLYDP
                     EGVGGTHVMYVLHHADKPELYSGLPKDPKIDTTVTLWKDVLKPVAAVALGGLALAEVA
                     HYITVGPNVEEDLEEHHHSENAEGGKHE"
     gene            4064..4741
                     /locus_tag="PXF40_001524"
     CDS             4064..4741
                     /locus_tag="PXF40_001524"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HDL5802854.1"
                     /translation="MSKKFEITNDTKIVRHKPLARVSHWFLVISFFMTMFTGVAFFFP
                     DFAWLTEILGTPQIARAVHPFTGIIMFIAFIIMALIYWHHNIPEKNDIRWAKGIVEVL
                     KGNEHKVSDNGKYNLGQKLLFWTLILAMFTLLATGIIMWRQFFSHYFSIPMLRIAILL
                     HSASAFMLFTGILVHMYMAFWVKGSIRGMVEGWVTVRWAKKHHPRWYREEVLPELERQ
                     VAEQNNK"
     gene            4797..5714
                     /gene="fdhE"
                     /locus_tag="PXF40_001525"
     CDS             4797..5714
                     /gene="fdhE"
                     /locus_tag="PXF40_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HDL5802855.1"
                     /translation="MSIKILPQDDIKQAASSFQQPELLFANPKNLYLRRAKRLRELAK
                     QNPFGEYMEFSANLVDIQLALLESQPIADYSQKITACVERTQGETPLNAQNFQRTDEW
                     RTLLLAIIEKFKPYANDTVLATIEVLEKAAKSELDTLADNLLNERYELVGADKAVFIW
                     AALSLYWVQLAQQLPRNSRAEIGHKHLCPVCNSAPVSSVIHFGEAQGLRYLHCSLCES
                     EWHVVRTKCTNCDETGKLDYWSLDTVEAAVKAESCGDCHSYLKVLYQDKDVNVEPVAD
                     DLATLFLDSEMEQKGLSRSGINPFLFQVE"
     gene            complement(5784..6170)
                     /locus_tag="PXF40_001526"
     CDS             complement(5784..6170)
                     /locus_tag="PXF40_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802856.1"
                     /translation="MLRNFMIMLHFIYGFAMKNAFSFFVISLFLTMNSISYASNPIPS
                     NKEKLNGVKKQQDKPKFRISERKVLKNKEKDEEVSNFSMEELRVGAQRPLDDSVIQYF
                     KSQCRYAFMSDREIIANRCEVKKIAD"
     gene            complement(6181..7551)
                     /gene="gorA"
                     /locus_tag="PXF40_001527"
     CDS             complement(6181..7551)
                     /gene="gorA"
                     /locus_tag="PXF40_001527"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009499791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HDL5802857.1"
                     /translation="MAKHYDYIAIGGGSGGIASINRAASYGQKCAIIEAKHLGGTCVN
                     VGCVPKKVMFYGAQVAEAINHYAPDYGFDITVNNFDYAKLVESRQAYIGRIHTSYGNV
                     LAKNNVDVLNGFARFKDAKTLEVSYADGSVEEVTADHILIATGGRPTVPNVKGAEYGI
                     TSDGVFALDALPKSVAIVGAGYIAVELAGVFNSLGVNTHLFVRQHAPMRNQDPLIVDT
                     LLEVLAQDGIELHTQATPQEVVKNADGSLTLKLQDGRETSVESLVWAIGREPATDKIN
                     LEAAGVETNERGFIKVDKFQNTNVPNIYAVGDIIEGGIELTPVAVAAGRRLSERLFNN
                     KPNEHLDYSLVPTVVFSHPPIGTVGLSEPKAIEQYGAENVKVYKSSFTAMYTAVTQHR
                     QPCRMKLVCVGEGEKVVGLHGIGFGVDEMIQGFAVAIKMGATKADFDNTVAIHPTGSE
                     EFVTMR"
     gene            complement(7628..8152)
                     /locus_tag="PXF40_001528"
     CDS             complement(7628..8152)
                     /locus_tag="PXF40_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HDL5802858.1"
                     /translation="MHSELNTRANILGKIIFASRWLQLPIYLGLIVVQGIYAYKFIKS
                     LYHLVINLNEMDSNTVMLAVLNLIDVVMIANLLVMVIVGGYETFVSRLKVDDHPDQPE
                     WLDHVNATILKVKLSMAIISISSIHLLQTFINASNLDEKQMMWQVVIHLAFIVSALAM
                     AYIDKMLNSGHMKH"
     gene            complement(8247..8885)
                     /locus_tag="PXF40_001529"
     CDS             complement(8247..8885)
                     /locus_tag="PXF40_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5802859.1"
                     /translation="MELKHTIEQRKTIKAFNSTIKISRTELEEMVALSQLAPSKANLQ
                     PWRFVIIDVEILKAALSKNVAFNGPPCETASAIVVILADLQYEKLLGAIVDQSVETGC
                     LHKEFRERKFDFLLNLHNQATQAEIRDQVLIDTSLAAMQLMLIAKDKGYDTHAIGVFE
                     RPAVLKLLNIDAERYLPVMLLAIGKAANPALPSCRLPLEYTVSWNDGQGFKI"
     gene            complement(9027..9821)
                     /locus_tag="PXF40_001530"
     CDS             complement(9027..9821)
                     /locus_tag="PXF40_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5802860.1"
                     /translation="MALLEVNHLNKRFVERSSLFHKQDFYAVKEVSFTLNRKETLAII
                     GENGAGKSTLAKMVAGMVGPTSGELIFRGTPLSFGDYKYRAKHIRMMFQDPNDAFDPN
                     YNIGQILDAPLRLATDLNEEERNERIFNTLKLVGMYPEQALVPISEASSGQKQRIAFA
                     RALILEPEIIIADDTINSLDFSVKTQLINLMLSVQQRQGIAYIYVGQNLGLIKHIADK
                     IMVMQSGEVVEYGLTKEVLLNPQHQITKRLIESHFGKHLSSYAWAS"
     gene            complement(9922..10998)
                     /gene="fbaA"
                     /locus_tag="PXF40_001531"
     CDS             complement(9922..10998)
                     /gene="fbaA"
                     /locus_tag="PXF40_001531"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014990940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HDL5802861.1"
                     /translation="MSLLNIVKPGVVTGDDVQKVFAYAKEHNFAIPAVNCVGSDSVNA
                     VLETAARVKSPVIVQFSNGGAQFYAGKGIKPASGARADVLGAIAGAKHVHQLAEEYGV
                     PVILHTDHAAKNLLPWIDGLLEAGEKHFAETGRPLFSSHMIDLSEEPIEENMEICREY
                     LARMDKIGMTLEIEIGVTGGEEDGVDNSDVDESKLYTQPSEVLYVYDQLSPISPRFTI
                     AAAFGNVHGVYKPGNVKLKPSILGASQEYVSKERGLPAKSLDFVFHGGSGSSREEIRE
                     AISYGAIKMNIDTDTQWAAWDGILQFYKANEAYLQGQLGNPTGPDAPNKKYYDPRVWL
                     RKMEESMSKRLEQSFEDLNCVNVL"
     gene            complement(11095..12270)
                     /locus_tag="PXF40_001532"
     CDS             complement(11095..12270)
                     /locus_tag="PXF40_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012072290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HDL5802862.1"
                     /translation="MSVIKMTDLDLAGKRLFIRADLNVPVKDGKVTSDARIVATIPTL
                     KLALQKGAKVMVTSHLGRPTEGVFEEENSLQPVVDYLNASDLGVPVRLVRDYLDGVEV
                     NENEIVVLENVRINKGEKKNDPELAKKYASLCDVFVMDAFGTAHRAEGSTYGVAEYAP
                     VACAGPLLATELDALGKALKEPQRPMLAIVGGSKVSTKLTVLDSLSKIADQLIVGGGI
                     ANTFIAAEGHAVGKSLYEEDLIPEAKRLAQVTNIPVPVDVRVGTEFSETAPATEKAVS
                     EVRADESIFDIGEKSSEQLAEIIRNSKTILWNGPVGVFEFPNFRKGTEVISNAIAEAT
                     ANGAFSIAGGGDTLAAIDLFGIKDKISYISTGGGAFLEFVEGKVLPAVEILEKRANG"
     gene            complement(12525..13883)
                     /locus_tag="PXF40_001533"
     CDS             complement(12525..13883)
                     /locus_tag="PXF40_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HDL5802863.1"
                     /translation="MANQQQERQSWSNRLAYIMTVAGATVGFGATWRFPYLVGEHGGG
                     AYVFLFCIAMIVIGIPMILVENVIGRRMRVNAIDAFAGFANGKKIASGWKILGYMGLL
                     GAFGILAYYMVLGGWVLNYIGSLLTGTLDLSQPVTVGTTQQFFQQSIFNSPMTIIAYT
                     ALFVLVNYFILVKGIVDGIERSVKYLMPILFIFLIVMVVRNITLPGAAEGIAFYLMPD
                     FSKITPKLFVFVLGQVFFALSLGFGVLITLSSYLDKSENLVKTATITGVMNTLIAVLA
                     GFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSNMWGGTVFAVIFFSLLVVAALTTSLTI
                     YEVIITALQEKAKISRQKAIFITLATIFLLGNIPSALSDNILQDVQVMGKSIFDAFDY
                     ISGNILFILTALGSAIFVGFVLKEEAKEELGAGKMFTTIWFNYVRFVIPVIILVIFFN
                     SL"
     gene            complement(13953..14780)
                     /locus_tag="PXF40_001534"
     CDS             complement(13953..14780)
                     /locus_tag="PXF40_001534"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HDL5802864.1"
                     /translation="MNHPKHRAFLKWAGGKYRLIPDIQTHLPKKACLVEPFVGAGSVF
                     LNTDFERYILADINPDLINLFNVVKADVEEYIAQTKQLFLHPQANTEAFYKARRAEFN
                     RSKDIFRRSVIFLYLNRFGYNGLCRYNQKKGYNVPFGRYKTHYFPEKELRFFAEKAQK
                     ATFVCADFEQVFELAKNQLTDYVIYCDPPYAPLAQETNFTQYAGGGFSLEQQGRLATL
                     ALEMKGLGVPVLISNHDTDFTRRIYQSADITQIQVQRSIGQKVGSRVKVGELFALFI"
     gene            complement(14794..15882)
                     /gene="aroB"
                     /locus_tag="PXF40_001535"
     CDS             complement(14794..15882)
                     /gene="aroB"
                     /locus_tag="PXF40_001535"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HDL5802865.1"
                     /translation="MLQVNVELKERRYPIIIGAGLLNQPASYSPLKSGDKVMIVSNPT
                     VATHYLSVVTNALKELGCHVDSVLIPDGEEYKTLESLNLIFTALLEKNHNRDTTLIAL
                     GGGVIGDVAGYAAASYQRGIRFIQIPTTLLAQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     VSVIVDTNTLHTLSKREVSAGLAEVIKYGAIFDVTFFEWLEKHIDDLVSLKQDELEYC
                     IQRCCQLKADVVARDETEKGDRALLNLGHTFGHAIEARMGYGVWLHGEAVSVGMLEAA
                     ELSRILGDLSPQEVARLEKLLARANLPTISPDGMEPAEYLPYMWRDKKVLAGQLRLIL
                     LKSLGEAYVSSQATESQVLASIERFTQR"
     gene            complement(15906..16427)
                     /gene="aroK"
                     /locus_tag="PXF40_001536"
     CDS             complement(15906..16427)
                     /gene="aroK"
                     /locus_tag="PXF40_001536"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HDL5802866.1"
                     /translation="MAEKRNIFLIGPMGAGKSTIGRQLAQTLGMEFMDSDSVIEERAG
                     ADIDWIFDVEGEEGFRKREERILNELTQNYGIVLSTGGGSILSKDNRNVLSARGIVIY
                     LETTVDKQFERTQRDKKRPLLQTEDPRKTLEELAKIRNPLYEEIADITIHTDEQSAKV
                     VANQIIDMIDNLQ"
     gene            complement(16664..19228)
                     /locus_tag="PXF40_001537"
     CDS             complement(16664..19228)
                     /locus_tag="PXF40_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HDL5802867.1"
                     /translation="MRIAKIIFSALLSLLVLGGVIGGLLYMHFKSDLPDVATLKNVEL
                     QQPMQIFTLDGKLIGEVGEERRIPVKLDDIPPMLVKAILATEDARFYEHKGIDPKGIM
                     RAIWRTSQGDTQGASTITQQLAKNFFLTPERSLERKAKEAILALEIEQVLSKNEILEL
                     YLNKIYLGYRSHGVAAAAKTYFNKSLKDLTLSEIAIIAGLPKAPSTMNPLYSVKRAED
                     RRNVVLGRMLETGDITKEEYEKAKAEPVVANYYGATLEFRADYVTEMVRQEIVKRYGE
                     NIAYNKGLKVYATVLSADQKAAQDALRENLIDYDRRHGWRGAEKLWTGSSAWDDEKII
                     DHLSKLPKSEPFTPAVVMQADKSKYTILLANGDISVLKRTNASFAPKGLKAGEQIWVR
                     QNKNREWALGQIPEVNSALVSINSENGAIESIVGGFSFEQSRFNRATQSLVQVGSAIK
                     PFIYTAAMNKGLSLSTTISDSPIVIKKKGQKEWRPKNADGVYGGPLRTRVALGKSKNM
                     VAIRILQMAGIDYVADYLQRFGFNRNQYVATESLALGAASFTPLEMARAYAVFNNGGY
                     LIEPYIIDRIIDAQGYELYQANPVVACNSCDSPVVYPEPKYFESVKIHDEAQVGVQTI
                     ANSSNNDDDDVVEDVGDSEPELQANNSEKNAPSLMAESSHHIKGLRYAPHVISDELAF
                     LMRSALATAITGEPEYGWRGTSYKMLNTIKRADVGGKTGTTNNAKATWYAGFGANIST
                     VVYVGFDDNKRVLGRGASGSSTALPAWTNYMKVALSDKPVEKSTLPKNIIEVNIDPNS
                     GFLGNGRKEYFIKGTEPTKRYIVERAYTEKAPQKTESAPLRLGLPPPGVLKSGELF"
     gene            19352..20050
                     /locus_tag="PXF40_001538"
     CDS             19352..20050
                     /locus_tag="PXF40_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComA"
                     /protein_id="HDL5802868.1"
                     /translation="MKLLKAHSKTPSNRIILGLSEDEQRYCLVKNKAEKFTVFWQAKP
                     ASIEELIGNLTPQEQAMMTLVRPIPYQYIWRKTVFMANTLNEAQLHRKVIHILKNEQP
                     LALDLLNIDYQRFPSSNDNLDKVVIYAVRKSYTENLSQFNSILDCELHCYARAIIHLT
                     QSQNNQPAPCFSFKQKYFQFTETELLILQTEPEDCIHLSDLKIDHLEIECEQEKQLYC
                     LALGASLWNGKVLI"
     gene            20026..>20448
                     /locus_tag="PXF40_001539"
     CDS             20026..>20448
                     /locus_tag="PXF40_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802869.1"
                     /translation="MEWQGIDLSANRKNNWFAGSDKGIKNVIYTLLLSALISLALIFL
                     YLQKNQEIQPLAQQLELVKTDILNIENKIISLNSNHTNTLPFAEPKKIAQLLAIIDNL
                     PLKNGGIETIQIYLETDLYLKIIGNLDNQSDFQSLESYL"
BASE COUNT         6306 a         4465 c         3741 g         5936 t
ORIGIN      
        1 gatacacctc ttagatcaat ttattaaatt aattttgatc aaattttgtt ttatttctca
       61 cattatgtga tttggagtga ttatgcagat ctcaagacgt aagttcttca aggtctgtgc
      121 aggtggtatg gcgggaactt ctgctgcaat gttgggtttt gctccagcaa cagcattagc
      181 tgcaccgcgt gagtataagc tcttaagagc aaaagaaact cgacaaacct gtacttactg
      241 cgcggtaggc tgtggcatga ttatgtacag cttaggcggc gaagcaatga acagcaaagg
      301 aaagttaatt catattgagg gtgattctga ccatccagta agccgtgggg cgttatgtcc
      361 gaaaggtgca ggggcgttgg actatgttaa tagtgaccgc cgtgtgcatt atccggaagt
      421 gcgtgaagcc ggttcaagtg agtggaaacg catttcttgg cacgaggcaa ttgaacgtat
      481 tgcccgccat atgaaaaatg accgtgatga gaacttcgtc acccacaatg aagcagggct
      541 ggaagtaaac cgttggatga cggcaggttt cttggcaggc tcggcgtgta gtaacgaaac
      601 cggtatcgtc acccagaagt ttatccgctc tctcggtatg atttttaccg acaaccaagc
      661 gagtatctga cacggaccaa cggtagcaag tcttgctcca tcatttggtc gcggtgcgat
      721 gaccaaccac tgggttgata ttaaaaactc cgatttagtg atcgttatgg gcggtaacgc
      781 agccgaagct caccctgtgg gtttccgttg ggcagttgaa gcgaaaaaac agaacggtgc
      841 gaagttaatg gtggtagatc cacgctttaa ccgtagtgct gcggtggcgg atatttatat
      901 accattgcgt ccgggtacgg acattgcgtt cttgttaggt gcggtaaact acctgcttaa
      961 aaacgacaaa attcaacacg agtatgtgaa gcattacacc aatgccacat tcttactcaa
     1021 cgaagggttt aaattcgaag acgggctttt caccggctac gatgaagcca ctcgtaccta
     1081 taaagacaaa tccacttggg cttatcagtt agatgaacag ggtcagccga aacgggatat
     1141 gacaatgcaa gatccacgtt gtgtgatcaa tatgctcaaa gaccacgttt cccgctatac
     1201 gcctgaaatg gtagaacgca ttaccggtac gccacaaaaa gatttcctga ttttctgtga
     1261 agagattgcg aaaacctcag cgccggataa agccgccacc ttcctctatg ccttaggttg
     1321 gacacaacac accgtgggcg cacaaaacat tcgctcaatg gcgatcattc agttgctgtg
     1381 cggtaacatt ggtgtctccg gcggtggggt aaacgcactg cgtggtcact ctaatgtaca
     1441 agggattacc gacctaggct tgttcccaca tatgttgccg ggctatatcc gcctgccaac
     1501 cgaagcggac gcaaccttag aaagctactt aaatgcgatt gcaccgaaaa ccttagtggc
     1561 agggcaagta aactacgggc aaaacaaccc gaaattcgct gtgagtatgc tcaaaacctt
     1621 ctacggcgat aaggcaacca aagagaacga gttcggctat cactatttac cgaaataccc
     1681 gaaaggcggt acagatcact tccgctttat cgaacagatg tatcaaggca aagtgaacgg
     1741 ctatttctgc caaggtatga acccgattgc ctcttaccct aactcgcaga agttaattaa
     1801 agcgttgagc aatttgaaat atttagtcat ttttgacccg cttattaccg atacttccga
     1861 gttctggaaa aatcacggtg agttcaacaa tgtgaacccg tctgaaattc aaaccgaagt
     1921 gttccgcttg ccgaccactt gctttgcgga agaagatggt tcaattgcga actccggtcg
     1981 ctggttacaa tggcactgga aagcagcaga cgcaccacac gaggcaaaac cggacgtgga
     2041 tattctgtct gaaatccgtg ccgaactgat ccacctttat cataaagaag gcggaaaagc
     2101 accgcttgaa ccgttagaag cgatgacgtg gaactatatg aacccgttag aaccgaagcc
     2161 ggaagagatc gccaaagaga acaaccgtta tgcattggaa gatctgaaag atgcagacgg
     2221 caacatcatc gtgaaaaaag gcgaactatt atccagcttt acacaaatgc gtgatgacgg
     2281 tacaacctcc ggtggttgtt ggatctactg cggtcaatgg actccgaaag gtaaccaaat
     2341 ggcgaaccgt gataactccg acccatcagg cttaggtaac accttaggct gggcattctc
     2401 gtggccggta aaccgccgta ttctatacaa ccgtgcatcg gcagatttaa gcggtaaacc
     2461 gtggaacccg aaacgccagc tagttaaatg gaacggtaaa aactggaact atgtggacgt
     2521 tgccgattac ggtacagcac caccaaatag ccctgtgaca ccatttatta tgcaaccgga
     2581 aggggtatcc ggcttgttcg tgcgtgaacg tatgcaagac ggtccattcc ctgagcatta
     2641 tgaaccgttt gaaacgccaa tcggcacgaa cccgttacac ccgaatgtaa tcagcagtcc
     2701 ggtggcacgc attctgccga gcgataaaga ggatttaggc accagcgatg agttcccata
     2761 tgtcggtaca acttaccgct taaccgaaca cttccactac tggacgaaaa atgccctgat
     2821 taacgtcatt gctcaaccgg agcaattcgt ggaaatcggc gagaaacttg ccgaagagaa
     2881 aggcattaaa aatggcgaca aagtacgtgt ttggtctaaa cgtggcgaaa ttaaagccgt
     2941 tgccgtggtg actaaacgta tccgttcatt ggtctctgac ggcaaaccaa tccacactat
     3001 cggtgtgccg atccactggg gctttgcggc tacaaccggt gcgaaaaaag gctattttgc
     3061 caataactta accgtgcgaa caggtgaacc aaactcaaat acacctgaat cgaaatgtat
     3121 gttattaaac attgagaaaa ttgtgggggc ttaacaatga gtacagttca aactcaaaac
     3181 attattaaaa tctccgcaac ctcggcgctg acaccggcgc cgcaggctcg ttcgcaccaa
     3241 gtggaagtag cgaaactgat cgatgtcacc acttgtatcg gctgtaaagc ctgtcaagtg
     3301 ggctgttcag aatggaatga cattcgctcc gatgtaaatg caaactgtgt cggcgtgtac
     3361 gacaaccctg cggatctaaa tgcgaaagcg tggacagtaa tgcgctttaa cgaagtagaa
     3421 gaaaacgacc gtttagaatg gttgatccgt aaagacggct gtatgcactg tgccgagccg
     3481 ggttgcttga aatcttgccc gtcaccgggt gcgattatcc aatacgccaa cggtattgtt
     3541 gatttccaat ccgacaaatg tatcggttgt ggctactgta tcgcaggttg tccgttcaac
     3601 attcctcgta tgaatccgga cgataaccgt gtttacaaat gcaccctgtg tgtggatcgt
     3661 gtcaatgttg gtcaagaacc ggcttgcgtg aaaacctgcc cgaccggtgc aatccgcttc
     3721 ggtagcaaag aagagatgaa gttctatgca gaacaacgca ttgctgatct gaaatctcgt
     3781 ggctatgaaa atgccggctt gtacgaccct gaaggcgttg gcggtacgca cgtaatgtat
     3841 gtattacatc atgccgacaa accggagctt tattcaggct taccgaaaga tccgaagatt
     3901 gataccacag taaccttatg gaaagacgtt ttaaaacctg tggcggcagt agcgttgggt
     3961 ggtttagctt tagcagaagt tgcacactat attaccgttg ggccaaacgt tgaggaagat
     4021 cttgaagaac accaccatag cgaaaatgca gaaggaggca aacatgagta agaaatttga
     4081 aatcacgaac gataccaaaa tcgttcgtca taagccctta gctcgtgtta gccactggtt
     4141 cttagtaatc tcttttttta tgacgatgtt taccggtgtt gccttcttct tccctgactt
     4201 tgcttggctt accgagattt taggtactcc acagattgcc cgtgcagtcc acccatttac
     4261 cgggattata atgtttattg catttattat tatggcgtta atatattggc accataatat
     4321 ccctgagaaa aatgatattc gttgggcaaa aggcattgtt gaagtactaa aaggtaatga
     4381 gcataaggtt tccgataatg gaaaatacaa tttgggtcaa aaattactct tttggactct
     4441 tattcttgcg atgttcactc ttttagccac agggattatt atgtggagac aatttttctc
     4501 tcactacttc tcgattccta tgctaagaat tgcaatttta cttcattcag caagtgcatt
     4561 tatgctattt accggaattt tagtacatat gtatatggca ttctgggtaa aaggctcaat
     4621 cagaggtatg gttgagggtt gggttaccgt tcgctgggca aaaaaacacc acccaagatg
     4681 gtaccgtgaa gaagtgctac ctgaattaga aagacaagta gctgagcaaa ataataaata
     4741 acctcaagtg cggtattatt accgcacttt tattttattg gtttaaaaag aatattatga
     4801 gtatcaaaat actacctcaa gatgatatca aacaagcagc tagttcattt cagcaacccg
     4861 agctcttatt tgctaatccc aaaaatctgt atttacgccg cgctaagcgg ctacgtgaat
     4921 tagccaagca aaacccattc ggtgaatata tggagttttc tgctaacctc gtggacattc
     4981 aattagcatt acttgaaagc cagccaattg cagattattc tcaaaaaata accgcttgtg
     5041 tagagcgcac gcaaggagaa acaccgctaa atgcacagaa ttttcagcgt actgatgaat
     5101 ggcggacact actcttagcc attattgaga aattcaagcc ttatgcaaat gatactgttc
     5161 ttgcaacaat tgaagtattg gaaaaggcag ctaagtcaga gctagacaca cttgctgata
     5221 atttgctaaa tgaacgatac gaacttgtgg gcgcagataa agctgtcttt atttgggctg
     5281 ctctctcact ttactgggta caattagctc aacaattacc acgtaattct cgtgcagaaa
     5341 taggccataa acatttatgt ccggtatgta actcagcacc tgtaagcagt gtgattcatt
     5401 tcggtgaagc tcaagggtta cgttatctac actgttcttt atgtgaaagt gaatggcatg
     5461 tagtacgtac aaagtgtaca aactgtgatg aaaccggcaa actggattat tggagcttag
     5521 atacagtaga agcagcagtt aaagctgaaa gttgtggcga ctgccattcc tacttaaaag
     5581 tactctatca agataaagac gtgaatgtgg aacctgttgc tgatgattta gcaactctat
     5641 tcttagattc cgagatggaa caaaaaggtc tttcaagaag tgggataaat ccatttttat
     5701 ttcaagtaga gtaactcatt tacaacaaaa acggagcata acgctccgtt ttttattaca
     5761 tttaactcat acactatact tttttaatca gctatttttt taacttcaca gcggttagca
     5821 ataatctccc gatctgacat aaatgcgtat cggcattgag atttaaaata ttgaatcaca
     5881 gaatcatcaa gaggtcgttg tgctccaaca cgtaattcct ccatagaaaa attactaacc
     5941 tcttcatctt tctctttatt tttcaatacc ttacgttcag atattctaaa cttaggcttg
     6001 tcttgctgtt tttttactcc gtttaatttt tctttattac taggaatagg attacttgca
     6061 taactaatac tattcatcgt aagaaaaaga gaaataacaa aaaagctaaa agcgtttttc
     6121 atagcaaacc cataaataaa atgtagcata atcataaaat tacgtaacat tttattacat
     6181 ttagcgcatg gttacaaatt cttcagatcc tgtcgggtga atagccactg tgttgtcaaa
     6241 atcagctttc gttgcgccca ttttaattgc aacagcaaaa ccttgaatca tttcatcaac
     6301 accaaaacca ataccatgta acccaaccac tttttcccct tccccaacac aaactaattt
     6361 cattcggcaa ggttgacgat gttgtgtaac cgcagtatac attgcagtaa atgaagattt
     6421 atacactttc acattttctg ccccatattg ctcaatcgct tttggctcac ttaaaccaac
     6481 agtacctatt ggtgggtggc taaaaacgac tgtcggtact aagctataat ccaaatgttc
     6541 atttggttta ttattgaaca accgttccga tagcctgcga ccagctgcaa ctgcaacagg
     6601 agttaattca ataccacctt caataatatc accaacagca tagatatttg gcacattagt
     6661 attttggaat ttatccactt tgataaaacc acgctcgttg gtttcaacac cagcagcctc
     6721 taaattaatc ttatctgtcg ctggctcacg accaatagcc cacaccaagc tttcaacaga
     6781 ggtttcacga ccatcttgca attttaatgt caatgaacca tctgcatttt taactacttc
     6841 ttgaggagtc gcttgtgtat gtaattcgat cccatcttga gctaatactt caagcaatgt
     6901 atccactatt aatgggtctt gattacgcat tggagcatgt tgacgaacaa aaagatgggt
     6961 atttactcct aaactattaa atactccagc taattcaact gcaatatacc ctgcccccac
     7021 aattgctacg gacttcggta aagcatctag tgcaaataca ccatcagaag tgataccgta
     7081 ttcagcccct ttcacattgg gtacagttgg acgaccacct gttgcaatca gaatatggtc
     7141 tgctgtgacc tcctcaacgg aaccatcagc ataactcact tctaatgttt tagcatcttt
     7201 aaagcgagca aaaccattta aaacatcaac attatttttt gccagcacat taccatatga
     7261 ggtatgaatg cgcccaatat aggcctggcg actctcaact aatttggcat aatcaaaatt
     7321 atttaccgta atgtcaaaac cataatcagg ggcgtaatgg ttaatcgctt ctgcaacttg
     7381 tgcaccatag aacatcactt ttttgggtac acatcccacg ttcacacaag tgccacctaa
     7441 atgttttgct tcaataatgg cacatttttg cccatagctt gctgctcgat taattgaagc
     7501 aataccacca ctaccaccgc cgatagcaat ataatcataa tgtttagcca taagctattc
     7561 ctcgatctat aaaaacaaaa gcaacttatt cgttaagcgc tttatcaaat taaatttgca
     7621 tagaagacta atgtttcata tgccctgaat tcaacatttt atcaatatac gccatcgcta
     7681 atgctgaaac aataaaggct aagtgaataa ctacttgcca catcatttgc ttttcatcaa
     7741 gatttgaagc attgataaat gtttgtaata aatgaataga agaaatactg ataattgcca
     7801 ttgaaagttt tactttcaaa atagtcgcat taacgtgatc caaccattct ggctgatcag
     7861 ggtgatcatc tacttttaat ctagagacaa aagtttcata tcctccaaca ataaccataa
     7921 ccaaaagatt tgcaatcatc accacatcta ttaaatttaa taccgctaac ataacagtat
     7981 ttgaatccat ttcatttaaa ttgataacta gatgatacaa tgatttaata aacttatacg
     8041 catatatccc ctgtacaaca atcaacccta aataaatagg taattgtaac caacgacttg
     8101 cgaaaataat tttacctaaa atatttgccc tagtatttaa ttccgaatgc atatatctcc
     8161 tataaatagc aatacaaaaa taaattacaa cgctcaaatt ttaacaattt tttgccaaaa
     8221 aattaagata tttaaccgct tgcaccttat attttaaaac cttgtccatc gttccaagaa
     8281 accgtatatt ctagaggtaa acggcaactt ggcaacgctg ggtttgctgc tttaccgata
     8341 gctagtagca taacaggcaa ataacgttct gcatctatat tcaataattt taatacagca
     8401 gggcgctcaa acacgcctat cgcatgagta tcatagccct tatctttggc aattagcatt
     8461 aattgcattg ccgccaaact agtatcaatt aatacctgat ctctaatttc tgcttgagtt
     8521 gcttggttat gaagatttag taaaaaatca aatttacgtt cacgaaactc tttatgcaaa
     8581 cacccagttt ctaccgattg atcaacaatt gcgcctaata atttttcata ttgcaaatct
     8641 gccaatatca ccacaatagc agacgctgtt tcacaaggtg ggccattaaa ggcaacattt
     8701 tttgataatg ctgctttaag aatttcaaca tcaataatga caaaacgcca aggttgcaga
     8761 tttgcttttg agggagcaag ctgggataaa gcgaccattt cttctaattc agttctacta
     8821 atcttaattg ttgaattaaa agctttgata gttttacgct gttcaatcgt atgtttcaat
     8881 tccatctctt ttctcctatc tctcaaacaa ttgagatagt ctataattta aagattagga
     8941 atgtaataat tgaaaagagt tattctgcat atttattgaa ataggtcaaa attatcaagt
     9001 aatcatatta gagcaggagt aaagatttag cttgcccaag cataggaact aaggtgcttt
     9061 ccaaaatgac tttcaattaa acgtttcgta atttgatgtt gcggattcag taaaacctct
     9121 ttcgtcaagc catactctac tacttcgcca ctttgcatca ccattatttt atcggcaata
     9181 tgtttgatca gacctaaatt ttgccccaca taaatataag caatcccttg tcgctgctgg
     9241 acacttaaca ttaaattaat taattgtgtt ttgactgaaa aatccagtga attaatcgta
     9301 tcatccgcaa taataatttc cggttctaaa attaaagcac gagcaaacgc aatacgctgc
     9361 ttttgcccac tggaagcctc tgaaatagga acgagcgctt gctcaggata cattcctacc
     9421 aattttagcg tattaaaaat acgctcattt ctttcctctt catttaaatc tgtcgccaag
     9481 cggagcggag catctaaaat ttgtcctata ttataattag gatcaaaggc atcgttaggg
     9541 tcctgaaaca tcatacgaat atgcttagct cggtatttat aatcgccaaa tgaaagcggt
     9601 gttcctctaa aaatcagttc tccagatgtt ggcccaacca taccagcaac cattttagcc
     9661 aaggtagatt tcccagctcc gttttcacca ataatcgcta aagtttcctt gcgatttagg
     9721 gtaaaagaaa cttcttttac cgcataaaaa tcttgtttat gaaataggct actacgttca
     9781 acaaaacgct tattcagatg attaacttca agtaatgcca taataaattg gtgcttggaa
     9841 ataaagtgat agtttaccgc aaaaaataaa taaaaaaaga ccgcttatac aagcggcctg
     9901 atttatggaa ttttttgcaa attataaaac gttcacacag tttaagtctt cgaaagattg
     9961 ctctaagcgt ttagacatag actcttccat tttacgtaac caaacacgtg gatcgtagta
    10021 ttttttgttt ggtgcatcag ggcctgtcgg gttacctaat tgaccttgta aatatgcttc
    10081 gtttgctttg tagaattgaa gaataccgtc ccacgcagcc cattgggtgt cagtgtcaat
    10141 gttcattttg attgcaccgt agctgattgc ttcacgaatc tcttcacgtg aagaaccaga
    10201 accgccgtgg aaaacgaagt ctaatgactt tgccggtaaa ccacgctctt tagatacata
    10261 ctcttgtgaa gcacctaaga ttgatggttt taattttaca ttacccggct tgtaaacacc
    10321 gtgtacgtta ccaaatgctg ccgcaatcgt gaaacgtggg ctgattgggc ttaattggtc
    10381 gtaaacatat aaaacttcag aaggttgggt gtaaagttta gattcatcta catcagaatt
    10441 atctacgcca tcttcttcac caccggttac gccgatttcg atttcaaggg tcataccgat
    10501 tttgtccata cgggctaaat attcacggca gatttccata ttttcttcga ttggctcttc
    10561 agataaatcg atcatatgtg aagagaataa cggacgaccg gtttctgcga agtgtttttc
    10621 gcctgcttca agtaagccat cgatccaagg taataagttt ttcgcagcgt ggtcggtgtg
    10681 aagaatcaca ggcacaccat attcttctgc taattgatga acgtgttttg cacccgcaat
    10741 cgcccctaat acatctgcac gagcgcctga agccggctta atgcctttac ccgcatagaa
    10801 ctgcgcacca ccatttgaga attgcacgat taccggtgat tttacacgag cggctgtttc
    10861 taatacggca ttaactgaat ctgaacccac gcagtttact gccggaatag cgaagttgtg
    10921 ttctttagca taagcgaaaa ctttttgtac gtcgtcgcct gttactacac ccggttttac
    10981 gatgtttaat aatgacattt ttttcttcct ttgtatgaaa tgtgcaaaag cacattgtta
    11041 aaatatacgg ccaaatcttg caaaattttc acaaaatttg accgcttgta actgttagcc
    11101 gttagctcgt ttttctaaga tttccactgc cggtaatact ttaccttcca cgaattctaa
    11161 gaacgcaccg ccaccggttg aaatgtaaga aattttgtct ttgataccga ataaatcaat
    11221 cgcagctaag gtatcgccac caccggcaat tgagaatgca ccgtttgccg ttgcttctgc
    11281 aatcgcattt gaaatcactt ctgttccttt acggaagtta gggaactcaa acacgccgac
    11341 cggaccattc caaaggatgg tttttgaatt acggataatt tcagctaatt gctctgacga
    11401 tttttcacca atatcgaaaa ttgattcatc agctcgtact tcactcaccg ctttttccgt
    11461 tgccggtgca gtttcagaga attcagtacc tacacgcaca tcaaccggaa caggaatatt
    11521 ggttacttgt gctaaacgtt ttgcttcagg gattaaatct tcttcgtata atgatttacc
    11581 cacagcgtga ccttctgcgg caataaaggt attggcaata ccaccgccca cgattaattg
    11641 gtcggcaatt tttgaaagcg aatcaagcac agttaattta gtagatactt tagaaccacc
    11701 cacaatcgct aacattggac gttgtggctc ttttaatgct ttgcctaatg catctaattc
    11761 agtggctaat aacggacctg cacacgcaac aggggcatat tctgccacac cgtaagttga
    11821 accttccgca cggtgagctg taccgaatgc gtccattaca aacacatcac aaagtgatgc
    11881 atattttttt gctaactcag ggtcgttttt cttctcacct ttgttaatac gcacgttttc
    11941 aagcaccacg atttcattct cgtttacttc aacaccgtct aagtaatcac gcactaaacg
    12001 aacaggaaca cctaaatctg atgcatttaa gtaatcaact acaggttgta aagagttttc
    12061 ctcttcaaat acgccttctg tcggacgacc taaatgcgaa gttaccatta ctttagcacc
    12121 tttttgtaac gctaatttta aggttggaat ggtagcaaca atacgggcat ctgatgttac
    12181 tttgccatct tttaccggta cgttaaggtc agcacgaata aataaacgtt tacccgctaa
    12241 atcaaggtca gtcattttaa taacagacat agtttgttcc tctttagatt aaaatttaaa
    12301 agtgataacg gtcggattat atcagtttct aatcattttg ggctaaccta gatcaaataa
    12361 atgattaatt ttttatcatt ttagaatgct attatcctga ctgttcttat tcccccccaa
    12421 tatgcttggt taattaagca agaattgcaa attccccaca aaatttaacc gcttgtcact
    12481 aaaaataaag ctgtttgaaa atccattcaa acagcttata gaatttagag tgaattaaag
    12541 aaaatcacca agataatcac cggaatcaca aagcgaacat agttaaacca aatagtggta
    12601 aacattttac ccgcacctaa ttcctccttc gcctcttctt ttagaacaaa gccaacgaaa
    12661 atcgcgctac ctaaggcggt taaaataaac agaatattgc cactaatata atcgaaggca
    12721 tcaaaaatgc tcttgcccat aacctgcaca tcttgcaata tattgtcact taatgctgat
    12781 ggaatattac ccaacagaaa aatagtagcc aaagtaataa aaatagcttt ttgacggcta
    12841 atctttgcct tctcttgcaa tgcagtgata ataacttcat aaatagttaa cgaggttgtt
    12901 aatgccgcca ccactaatag actaaaaaag ataaccgcaa aaactgttcc cccccacata
    12961 tttgagaaca caatcggcaa actttggaat actaaagtcg gacctgaatt tggagcaacg
    13021 ccaaagctaa ataatgacgg aaaaatcata aaaccggcaa gtaccgcaat taaggtgttc
    13081 atcaccccag taattgttgc tgtttttact aaattctcgc tcttatcaag gtagcttgaa
    13141 agggttatca acacaccaaa accaaggctt aatgcaaaaa atacttgacc cagcacaaac
    13201 acaaacaatt ttggtgtgat ttttgaaaaa tcgggcatca gataaaaggc aatgccttca
    13261 gcagcccccg gtaaggtaat atttcgaacc accatcacaa tcaggaaaat aaacagaatc
    13321 ggcatcaaat atttcactga acgctcaata ccgtccacaa tgccttttac caaaataaaa
    13381 taattcacca atacaaaaag tgccgtataa gcaataattg tcattgggct attaaaaata
    13441 ctttgttgga agaattgttg ggtcgtgcca acggtaacag gttgagacag atctagtgtc
    13501 cccgtgagta agctaccgat ataatttaat acccaaccac caagtaccat atagtaggca
    13561 agaataccaa atgctccaag caagcccata tagccaagaa ttttccaacc tgaggcaatt
    13621 tttttaccat tagcaaaacc ggcaaaagca tcaatagcat tcactctcat tcggcgacca
    13681 attacattct ccactaatat catagggata ccaattacga tcatcgcaat acaaaataaa
    13741 aacacataag caccgcctcc gtgttccccc acaagataag ggaaacgcca agttgcacca
    13801 aaaccgactg ttgcaccagc aacggtcata atatacgcca atcggttaga ccaagattgg
    13861 cgttcttgtt gttgatttgc catttaatac tccatcggct aacaataccg cttcaaccaa
    13921 caagcggtca gatttttaga aaatattaca aattaaatga agagtgcgaa taactcgcca
    13981 actttaaccc ttgagcccac cttctgccct attgaacgct gtacctgaat ttgggtaata
    14041 tcggcagatt gataaatcct acgggtaaaa tcagtatcgt gatttgaaat taatacggga
    14101 acgcctaatc ctttcatttc taaagccagt gttgccaaac gcccttgttg ctctaggcta
    14161 aaaccaccgc cagcatattg cgtaaaattc gtttcttgtg ctaaaggagc gtaaggtggg
    14221 tcgcagtaaa tcacataatc cgttaattga ttttttgcca actcaaagac ctgttcaaaa
    14281 tccgcacaca caaaagttgc cttttgtgct ttttcagcaa aaaaacgtag ttctttttct
    14341 ggaaaataat gggttttata acgcccaaag ggaacattgt accctttttt ctggttataa
    14401 cggcaaagtc cgttatagcc aaatcgattt aaatacaaaa aaatcaccga gcgacgaaaa
    14461 atatcttttg agcgattaaa ctccgcacgg cgtgctttat aaaaggcttc tgtattcgct
    14521 tgtgggtgaa gaaacagttg ctttgtttgc gcaatatatt cctcaacatc tgctttcacc
    14581 acgttgaaaa gattaatcaa gtcaggatta atatcagcaa gaatataacg ttcaaaatct
    14641 gtattcagaa agaccgaacc tgcaccaaca aaaggctcga ctaaacaagc cttttttggc
    14701 aaatgggttt gaatatctgg aattaagcga tatttaccgc cagcccattt taaaaaggct
    14761 cgatgcttag ggtgattcat ttcattttaa acattaacgt tgggtaaaac gctcaataga
    14821 ggctaatact tgagattctg tggcttgcga tgaaacgtaa gcttcaccaa gtgatttcaa
    14881 taaaattagg cgtaattgac ctgccagtac ttttttatct cgccacatat aaggtagata
    14941 ttctgccggt tccattccat caggtgaaat tgttggcaaa ttggctcggg ccaataattt
    15001 ttccaagcga gcaacctctt gaggacttaa atcccccaga atacgagata attccgcagc
    15061 ctctagcata ccaaccgaaa cagcctctcc gtgtaaccat acaccatagc ccatacgtgc
    15121 ttcaatggcg tgaccaaagg tatgtcctaa gtttagtaat gcacgatctc ctttttccgt
    15181 ttcatctcga gcaaccacgt cagcttttag ctggcaacaa cgctgaatac aatattccag
    15241 ctcatcttgc ttgagactga ccaaatcatc aatatgcttt tcaagccatt caaaaaaagt
    15301 aacatcaaag attgcaccgt atttgatgac ttccgccaaa ccagcactga cttctctttt
    15361 ggataaggta tggagcgtat tggtatcaac aatcacagaa acaggctgat aaaaagcccc
    15421 aatcatattt ttaccgagtg ggtggtttac tgccgttttc ccgcctactg aagaatcaac
    15481 ttgagccagt aaagtggtcg gaatttgtat aaaacgaata ccacgttggt aagaggcagc
    15541 tgcatagcct gcaacatcac cgattacacc accgcctaaa gcaattaaag tggtatcgcg
    15601 attatgattt ttttctaata atgcggtaaa aatcaaattt aatgattcta gcgttttata
    15661 ttcttcaccg tcgggaatca ataccgaatc aacgtggcaa cccagctcct ttaacgcatt
    15721 tgttaccaca ctaagataat gtgtcgccac cgttggattt gagacaatca tcaccttatc
    15781 tccagatttt aatgggctat aactagcagg ctgatttaat aaccctgcac caattataat
    15841 cgggtaacga cgctctttta attccacatt gacttgtaac atatcttagc tcctttctta
    15901 cctggctact gtaaattatc aatcatatca ataatttgat ttgccactac tttagcgctc
    15961 tgctcgtccg tatgaatagt aatatctgca atttcttcat acaatgggtt acggattttc
    16021 gctaactctt ccaacgtttt acgggggtct tctgtttgca ataaagggcg ttttttatct
    16081 cgctgagtac gttcaaactg tttatccact gtcgtttcta aataaataac gataccacga
    16141 gccgataaca cattacggtt atctttagat aaaatcgaac caccgccagt tgaaagcacg
    16201 ataccataat tttgcgtcag ttcatttaga atacgttctt cacgcttacg gaaaccctct
    16261 tcaccttcaa catcgaagat ccaatcaata tccgcacctg ctcgttcttc gatcacactg
    16321 tcggaatcca taaattccat acctaatgtt tgagcaagct gacgaccaat cgtactttta
    16381 cctgctccca tcggcccaat caaaaaaata ttacgttttt cagccattat ttcttcttca
    16441 ttttaaaatt tactaaacat ttgatctgtg aaattaaaag aaaaaatgac cgcttgttct
    16501 acaagcggtc tgatttcttt aaaaaattgc aataaaactc atttattgac taaggaatat
    16561 ccaaatataa ctcacaaatc gcccaaaata aaattggcac ttattatcgc aagaaatccc
    16621 cctatttttc aacttttaag agcattatcc ttgtaataaa ttattagaat aattcaccgc
    16681 tttttagcac ccctggtgga ggtaatccta aacgtaacgg cgcagattct gttttttgag
    16741 gcgctttttc agtataagct ctctctacaa tataacgttt tgtaggctca gtacccttaa
    16801 taaaatactc tttacgtcca tttcctaaga aaccactatt agggtcaata ttaacctcaa
    16861 taatattttt tggaagggta cttttttcga caggcttatc tgacaatgca actttcatat
    16921 aatttgtcca agctggtaaa gcagtactag aacctgaagc acctctacct aatactcttt
    16981 tattatcatc aaagccaacg tacacaacag tagaaatatt agcaccaaat cccgcatacc
    17041 aagttgcctt ggcattattg gttgtaccag tcttcccgcc cacatccgct cgttttatcg
    17101 tattgagcat tttatagctt gttcctcgcc agccatattc aggctcacca gtaattgctg
    17161 tagctaaagc actacgcatt aaaaaagcga gttcatcact aataacatga ggagcgtaac
    17221 gtaacccttt gatatgatga gaagattctg ccattaagct cggcgcattt ttctcgctat
    17281 tgttcgcttg taattcaggt tctgaatcgc caacatcttc cacaacatcg tcgtcatcat
    17341 tattcgagga attcgctata gtttgtacac cgacttgagc ttcatcatga attttgactg
    17401 attcaaaata tttaggctca gggtaaacaa ctgggctatc gcaactatta caagctacta
    17461 caggatttgc ttgatataac tcgtagcctt gggcatcaat aatacggtca atgatatatg
    17521 gttcaatcaa ataacctcca ttattaaata ctgcataagc tcgagccatt tctaatggcg
    17581 taaaagatgc agcacccaat gcaagagatt ctgttgcaac atactgattt cggttaaagc
    17641 caaaacgttg taagtagtct gcaacataat caatccctgc catttgtaat atacgaatag
    17701 ccaccatatt tttcgattta cctaatgcaa cacgagttct caacgggccg ccataaaccc
    17761 catcggcatt tttaggtcgc cactcttttt gccctttctt tttaatgaca ataggagaat
    17821 cgctaattgt tgttgaaaga cttagccctt tattcattgc cgctgtgtaa ataaacggtt
    17881 taatcgcaga gcctacctga actaatgact gagtcgcacg attgaaacgg ctttgttcaa
    17941 agctaaagcc tccaacgata gattcaatgg caccgttttc actattaatt gacactaggg
    18001 ctgaatttac ctccggaatt tgtcctaaag cccactccct atttttattt tgacgtaccc
    18061 aaatttgttc acctgctttt aaccctttag gtgcaaaaga agcatttgta cgttttaaaa
    18121 cagagatatc accatttgcc aataaaattg tatattttga tttatctgct tgcattacaa
    18181 cagctggtgt aaacggctct gattttggca gcttacttaa atgatcgata attttctcat
    18241 cgtcccaagc agaactacct gtccataatt tttcagcgcc tcgccaacca tgacggcggt
    18301 cataatcaat caaattttca cgtaacgcat cttgtgctgc tttttggtct gctgaaagta
    18361 ccgtggcgta cacttttaag cctttgttat aagcaatatt ttctccatag cgtttcacaa
    18421 tttcttgacg aaccatttct gtcacataat ccgctcgaaa ttctaatgtc gcaccatagt
    18481 agttagctac tactggctct gctttagctt tctcatattc ctcttttgta atatctccgg
    18541 tttctagcat tctcccaagc actacattac gacggtcttc cgcccgtttt actgaataaa
    18601 gtggattcat cgttgaaggc gcttttggaa gccctgcaat aattgctatt tcagaaaggg
    18661 ttaaatcttt caaagattta ttaaaataag ttttagccgc agcggcaaca ccgtgagaac
    18721 gataccctag gtaaattttg tttaaataca gctccagaat ctcattttta ctgagaacct
    18781 gttcaatttc taaagctaaa attgcctctt tggccttacg ctctaaacta cgttcaggtg
    18841 ttaagaaaaa gtttttcgcc agctgctggg tgattgtact tgcgccttga gtatctccct
    18901 ggctagtgcg ccatattgca cgcataatac ctttaggatc gatcccttta tgctcgtaaa
    18961 aacgtgcatc ttcggtagca agaatcgctt ttactaacat cggtggaata tcatcaagct
    19021 tgaccggaat acggcgttct tctcctactt caccaattaa tttaccatct aaggtaaaaa
    19081 tctgcatagg ctgctgtaac tctacatttt tcagcgttgc cacatcaggc aaatcagatt
    19141 tgaaatgcat gtacagtaaa ccaccaatta ccccacctaa aaccaagagt gaaagtaaag
    19201 cactaaatat tatttttgcg atccgcatcg aaaaaatctc ttttggttaa tgacgaaaca
    19261 taaatttaaa gccaatatta ggtcactaag tataagctaa aaacgcttac ttcgcataac
    19321 taattgcaaa actttcctta ctatacttac tatgaaatta cttaaagcac attcaaaaac
    19381 accttcaaac cgtatcatct taggcttaag tgaagatgaa caacgttact gcttagtcaa
    19441 aaataaagca gaaaaattca ccgttttttg gcaagccaag cctgcgagca tcgaagagct
    19501 tatcggtaat ctcaccccac aagaacaagc aatgatgacg ctggttcgcc cgatccctta
    19561 ccaatacatt tggcgaaaaa ccgtttttat ggctaacacc ctcaatgaag ctcaattaca
    19621 ccgtaaggta attcacattt taaaaaatga gcagccactt gcattggatc tactcaatat
    19681 tgactatcag cgatttccaa gcagcaacga taatctggat aaagtggtta tctacgccgt
    19741 gcgaaaaagt tataccgaga atttgagcca atttaacagc atcttagatt gtgagctgca
    19801 ttgctatgca cgggctataa ttcatttaac acaatcccaa aataatcagc ctgcgccctg
    19861 tttttcattt aaacagaagt acttccaatt taccgagacg gaattactga tattgcaaac
    19921 agaacctgag gattgtattc atctatctga tctcaaaatt gaccatcttg aaatcgagtg
    19981 tgagcaagag aaacagctat attgcctcgc cttaggagca agtttatgga atggcaaggt
    20041 attgatttaa gtgctaatcg aaaaaataac tggtttgccg gcagtgataa aggcatcaaa
    20101 aacgtgattt atacactttt attatctgcc ctcattagct tggctctgat ttttctctat
    20161 ttgcaaaaaa atcaagaaat tcaaccgctt gcacagcaat tagagctggt aaaaaccgat
    20221 atattaaata ttgaaaataa aattatcagc ttgaatagta atcatacaaa caccttgccc
    20281 tttgccgagc ctaaaaaaat agcacaacta ctggcaataa tagataactt accgctcaaa
    20341 aatgggggaa ttgaaacgat acaaatttat cttgaaaccg atctctattt aaaaataatc
    20401 ggtaatttag ataatcaatc tgattttcaa agtctagaat cttattta
//
LOCUS       DANMCL010000049        20363 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.049, whole genome shotgun sequence.
ACCESSION   DANMCL010000049 DANMCL010000000
VERSION     DANMCL010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20363
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.049"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            178..1623
                     /gene="aldA"
                     /locus_tag="PXF40_001540"
     CDS             178..1623
                     /gene="aldA"
                     /locus_tag="PXF40_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HDL5802870.1"
                     /translation="MVKQHKMYINGEFVPALDGRTLAVYNPATEKAISEVPRGGADDA
                     KIAIDAAEAAQEAWERLPAIERGKYLRQIAVGIRERADEIARTISEEMGKTLSLATVE
                     VHFTADYLDYMAEWARRYEGEIIQSDRPNEHIFLYKKAIGVTTGILPWNFPFFLIARK
                     AAPALVTGNTIVIKPSEDAPNNAILFSEIVHQVGLPKGVFNVVTGYGNEVGPELSGNE
                     KIGMVSFTGSQFAGQKVMEAASKNIIKVNLELGGKAPAIVLDDADLELAATAVVNSRI
                     INSGQVCNCAERIYVQSSIKEQFVQKLVEKMQAVKYGNPLEQQDIDMGPMVNEKGLHK
                     VQEMVTHALHQGGNLVLGGNVVEGTGYYFEPTIIDNVDNSMDIMRHEIFGPVIPVATF
                     DTIDEAIRLANDCEYGLTSSVYTQNINKAMKVISRLKFGETYVNRENFEAMQGYHAGW
                     RKSGIGGADGKHGLEEYLQTQVVYLQFDDKV"
     gene            1879..2526
                     /locus_tag="PXF40_001541"
     CDS             1879..2526
                     /locus_tag="PXF40_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HDL5802871.1"
                     /translation="MSIFQQTNPNRRRYGLAVFIGIIAGIISAFVKWGAEHPFPPRSP
                     IDLFTAACPQPVLDAMNAAADQVAAKTIALQECSRAFLNPPHVFLRDYIGIDPTEAAF
                     TFADHAFNWIGVTHMIFSLVFAIGYCIVAEIFPKIKFWQGIGAGIIANICVHYITFPA
                     LGLTPPVAEWPLYEHISELVGHIFWFWTIEVIRRDLRNRITREPDAEVPLDQPFR"
     gene            complement(2659..4035)
                     /gene="trkA"
                     /locus_tag="PXF40_001542"
     CDS             complement(2659..4035)
                     /gene="trkA"
                     /locus_tag="PXF40_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HDL5802872.1"
                     /translation="MKVIILGAGQVGSTLAENLVSEDNDIVLVDNDPTRLDKLKDKHD
                     LQVIRGEYASPQTLRDAGAGDADLLVAVTNSDEVNMIACQIAYTLFNVPTKIARIRSA
                     DYVRERERLFNDDVLPIDHIIAPEILVKEDILRLIHYPGALQITHFADELVSIVNVKA
                     YYGGPLVGYPISALRDHLPHIDARVVAIFRQDKAIVPQGSTIIEAGDEVFFICATQHI
                     RAVMSELQRLDRPHKRIMIVGGGSIGSSLARDLEDQYRVKIIERNPVRAEKLAEKLSK
                     TMVLTGDASDEELLFEEHIENIDLFLAVTSDDEANIMSALLAKRLGAKKVIILVQRPA
                     YLHLIQGGTIDIAISPQQATISALASYVRKGDILQVSSLKLGVAGAVEIIAHGDATTS
                     KVVGRQIRELKLPQGAIVGAVVRGEEVIIAHKSTMIAENDRVIIFVNDKKQIDEIEKL
                     FQLGVFFL"
     gene            complement(4035..5366)
                     /gene="rsmB"
                     /locus_tag="PXF40_001543"
     CDS             complement(4035..5366)
                     /gene="rsmB"
                     /locus_tag="PXF40_001543"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HDL5802873.1"
                     /translation="MKKQSFKALSSRAISATIILQVLDQGKSLSTLIPDAQKQLEPKD
                     LPLVQEITFGVCRVLPRLESIIKLLVEKPLKGKTRLVHCLLLVGLYQLLYMRVPAHAA
                     VDEVVNATKTLKLDSFRALTNGVLRRFLREQEEILAKVDKHWQTLHPEWLVNKLKKAY
                     PNWREIVEANNQRPPMWIRVNQQHIKTNDYAALISELVEPEFAKNSENPTACVPKCAL
                     LLERAVNVNQLPHFEQGWATVQDAHAQWSAELLGAENGETVLDACAAPGGKTTHILEK
                     APKAKVMALDIEESRLSRVRENLVRLGQIAQVICGDASKPEEWLEEGVLFDRILLDAP
                     CSATGVIRRHPDIKWLRKEGDIAELATLQGEILKALWQRLKPNGILLYATCSVLPQEN
                     SEQIQRFLQDTPNAKQLEIDFNGEKVLEKQFFPQPNGGDGFFYAKLQKVAE"
     gene            complement(5418..5843)
                     /locus_tag="PXF40_001544"
     CDS             complement(5418..5843)
                     /locus_tag="PXF40_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HDL5802874.1"
                     /translation="MYNKLLIAIDLADLKSAKYVVDTALQMTAKNPNAVYRVVSIIEP
                     VDNSLISAFLPKNFDKEVVAEANQKLHEFTKNHFPEGSKVQHIVAYGTIYEEICRIAD
                     EKSVDLIMMLASSKPNAKGLSSNTVKVARNTTKPILVLR"
     gene            complement(5936..8584)
                     /locus_tag="PXF40_001545"
     CDS             complement(5936..8584)
                     /locus_tag="PXF40_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter permease"
                     /protein_id="HDL5802875.1"
                     /translation="MSVESKVDYDDLQDMVASNDSGGRTPSGLAKKAIVYVAILWSVF
                     QIYYASPLPFVFQEWLTHAGINLNVVVDDTKARSIHLAFAMFLAFLSYPAFASSPKHH
                     IPKIDWVFAIVGAGLALYYIFFYEGLVKRFGAPNTQDIIAGCLGILLVLEATRRSLGL
                     PLVIIAIVFLIYNFFGQYFPADWIVSHRSGSLSQIINQQWITTEGVFGVALGVSTKYV
                     FLFVLFGALLDKAGAGNYFIKTAFAYLGHLRGGPAKAAVVSSALTGLISGSSIANVVT
                     TGTFTIPMMKRVGFTKEKAGAVEVASSVNGQIMPPVMGAAAFLMIEYVNMPYSQLITH
                     AFLPALISYIALVYIVHLEACKMNLQGLPRAEEPSPILVFLLRTVASILVIVGLAIGV
                     YYGLGWIRDVAEDYAFMIVCAFLGLWYLLAIRRVASYPDLEADDPNSEIVSLPKRKPT
                     VNAGLHYLIPVVVLLWCLMVEMLSPGLSAFWGTITLIFIQLTQRPLLNFFRKESVTKE
                     IIKQGVRDVVDSLEAGGRNMTGIALATATAGIIVGVVALTGFGVQLSSVIELLSMGNI
                     VLMLILVAVFSLILGMGLPTTANYIVVSSLMATVIMEVGRQNGLIVPLIAVHLFVFYF
                     GIMADVTPPVGLASFAAAAISGGSPINTGMVAFKYSLRTVILPFLFIFNTDLLLIDLR
                     YPGHGWVVFITATVGVLAFTSATMQYIVTKNKWWETALLVVAAFALFRPGFFMDRIYP
                     SERHIEPVQFEEQLLASKVGQNVTLKVEGLNPYGKEIEFYAQLPVPEGATGEERLKNL
                     GLTLIQTDEKIKVDGVETPKVVIDMVEMDSPAAKAGLNWDQTIHYIAVPQDAPSKDWI
                     FIPALLLVFGIVANQRRRVKKQCVIA"
     gene            complement(8786..9748)
                     /locus_tag="PXF40_001546"
     CDS             complement(8786..9748)
                     /locus_tag="PXF40_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TAXI family TRAP transporter solute-binding
                     subunit"
                     /protein_id="HDL5802876.1"
                     /translation="MKKLVKLSFLASLVMGTASVQAAETFVTIGTGGQTGVYYVVGQS
                     ICQLVNRDSAKTGLKCNAPSTGASVANLNAIAAKEMDMGIAQSDWQYHAYNGSSSFEG
                     KKNDKIRAIFSLHPEPFTVMARTDSGIKSFDDLKAKRVNVGDPGSGTRATMNVILAAK
                     GWTDKDFKVASELKPAEMASVMCDNNLDAITYNVGHPNGALKEAAASCDAKLVPVTGP
                     EIDKLVADHSYYAKATIPGGLYKGSDEPTETFGVYATLVTSADVDADKVYNVTKAVFD
                     NFDRFKRLHPAFEHLKQEEMIKNALSAPLHEGAIRYYKEKGWIK"
     gene            complement(9932..11779)
                     /gene="selB"
                     /locus_tag="PXF40_001547"
     CDS             complement(9932..11779)
                     /gene="selB"
                     /locus_tag="PXF40_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HDL5802877.1"
                     /translation="MIICTAGHVDHGKTSLLQALTGTNTAHLPEEQKRGLTIDLGYAY
                     LPIENDILGFIDVPGHQRFLSNMLAGLGGIQHALLVISAEEGIKPQTEEHLDILHLLN
                     FQHIMIVITKADRAEETQISHLIEQVKTSYPFLAEAKTFVTSAKTQQGIEELKAHLIQ
                     LNQQHTQTHKPFRYAIDRVFNVKGAGLVVTGTTVAGKVSVGSELFLSNGKKVRVKAIH
                     AQNTPSETGVAGQRLALNIANVEKEEIKRGDWITELEPKFATDRITVQLTANQAFKEN
                     SIVHLYHFASHITGKLNLLEGQQAVKNQQFFAEVILDEPLHIAVGDKLIIRSGDDSLT
                     LAGAEVLEIHSPKRHKRTEARLALVKNLAKTTACNDFATRLDLYLQNRAMDLSLLLWA
                     EQCFAEDIAKLGFDVSSKWLFNSDFKAQAQQRVLEKMAEYHLQHQDQIGVTKARLYRI
                     ALLDLPENLANQFIEDLVEQKALVNSRGWLHLPEHRIELNADELQIWQQIRPLFEATN
                     QALWVRDIASQLSIDETQMRNLLYKVGKLGYLIPIVKDRFLLSEQIGQFATLIKDFIA
                     QNGSISVNQLRDELQYGRKLTVQLIEYFDRSGFLRRKGDVHLLRDSETF"
     gene            complement(11789..12085)
                     /locus_tag="PXF40_001548"
     CDS             complement(11789..12085)
                     /locus_tag="PXF40_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5802878.1"
                     /translation="MMKFDYNIVWLQKAEIKLFYQADYILQQSQNPIIAEQFYDAIKS
                     EVDKLSFTADVYRLRKKKEIPILNGKYQVKFLIGQENVYIVDFKSARQNSYSFL"
     gene            complement(12082..12258)
                     /locus_tag="PXF40_001549"
     CDS             complement(12082..12258)
                     /locus_tag="PXF40_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802879.1"
                     /translation="MELILAQDLAKLRTDKPQSFYTNDELDLLHQLENGLIETKSHAQ
                     VMEDLRKKLGITEK"
     gene            complement(12327..12959)
                     /gene="pdxH"
                     /locus_tag="PXF40_001550"
     CDS             complement(12327..12959)
                     /gene="pdxH"
                     /locus_tag="PXF40_001550"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005575912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HDL5802880.1"
                     /translation="MDLHHIREDYTKKVLSIRDCHSNPITQFEQWLSEAINAKVNEPT
                     AMNIATVAANGRPSSRMVLLKEVNSQGFVFFTNYQSRKGWEIADNPFGCLTFFWAELQ
                     RQVRIEGKIAKIPEAESDAYFDSRPYTSRLGAWASEQSQPIENYKALLLKSAQFALKY
                     PLSVPRPPHWGGYILIPDSIELWQGRSSRLHDRIHYWLENNEWKKERLSP"
     gene            complement(13017..14399)
                     /locus_tag="PXF40_001551"
     CDS             complement(13017..14399)
                     /locus_tag="PXF40_001551"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HDL5802881.1"
                     /translation="MQQLFRQIPSLDLLLKKPQAVELCQKFAYSSVAEQARSLLTQAR
                     QFISQQQALPDFIADENLFFIRLEQKVQALSEVKIRSVFNLTGTVLHTNLGRGLWSEK
                     AIQAATNAMRNNVALEFDIEAGKRSHRDNYISELLQILTGAEAACIVNNNAAAVLLML
                     ATFAQGKEVIVSRGELVEIGGAFRIPDIMAQAGCKLVEVGTTNRTHLKDYRNAITENT
                     AFLMKVHTSNYHIEGFTSSVSEEELVALGKEFNLPVITDLGSGSLTDMQALNLPAEPK
                     VQQKVAAGVDLVSFSGDKLLGGPQAGIIVGSQAMISQLQQHPLKRVLRCDKVILSALE
                     ATLRHYLFPEQLTDNLPTLHLLTQPLETLQHKAERLKQALHKRLNSAYILQIELSLAQ
                     IGSGALPTETLPSVAVTISAEKQSDLIALEQQFKTYPSPIIGRFAQQKFWLDLRSVAE
                     FDKLIEMLEY"
     gene            14467..14561
                     /locus_tag="PXF40_001552"
     tRNA            14467..14561
                     /locus_tag="PXF40_001552"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14501..14503,aa:Sec,seq:tca)
     gene            14768..15457
                     /locus_tag="PXF40_001553"
     CDS             14768..15457
                     /locus_tag="PXF40_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HDL5802882.1"
                     /translation="MSTLSRDSILSQIQNGLIASCQPVDDGPMDKPEIVAAMAAASVI
                     GGAKGIRIEGVDNLKAARAAVNVPIIGIVKRDLPDSPVRITPFLEDIDALAEAGADII
                     AVDGTFRTRPVSIEEAVKRIHEKGCLAMADCSTLEEGLHCQQLGFDIVGSTMSGYTGG
                     EMPDEPDYQLVKDLKAAGCNVMAEGRYNTPELAKTAIEIGADYVTVGSALTRLEHIVS
                     WFADSVKSAQK"
     gene            15467..16369
                     /locus_tag="PXF40_001554"
     CDS             15467..16369
                     /locus_tag="PXF40_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HDL5802883.1"
                     /translation="MRCLAIDIGGTKIATAIVQHNQVSQRQQIQTPTDKPQADQAGSL
                     HQAIGEIMQHYQGQFDFVAVASTGIINKGVLTALNPKNLGGLAEFPLKQSIEKHTDKP
                     IALLNDVQAAVCAEYLNEDQQAVKNFVFITVSTGVGGGIILNGELQIGSNGIAGHIGH
                     TLADPNGPLCGCGRVGCVEAVAAGRAIEAVSSQWEKPCSPKEVFERFRQGNPQAVELV
                     QKSAKAIANLIADLKISLDIQKVVLGGSVGLAEGYLPQVSNYLAEMPSVYHCVLENAL
                     SGQDAGLIGAAWWAENQLNQGFTL"
     gene            16394..17272
                     /gene="nanA"
                     /locus_tag="PXF40_001555"
     CDS             16394..17272
                     /gene="nanA"
                     /locus_tag="PXF40_001555"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005718701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HDL5802884.1"
                     /translation="MKNLKGIFSALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYV
                     GGSTGENFMLSTEEKKEIFRIAKDEAKDEIALIAQVGSVNLKEAVELGKYATELGYDS
                     LSAVTPFYYKFSFPEIKNFYETIIRETGNKMIVYSIPFLTGVNIGVSQFAELFENEKI
                     IGVKFTAGDFYLLERLRKAFPNHLIYAGFDEMMLPATVLGVDGAIGSTFNVNGIRARQ
                     IFELAQQGKIKEAFEIQNVTNDLIEGILGNGLYQTIKGLLELEGVQAGYCREPMTKEQ
                     TPAQKEVTKQLKAKFL"
     gene            complement(17333..17539)
                     /locus_tag="PXF40_001556"
     CDS             complement(17333..17539)
                     /locus_tag="PXF40_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802885.1"
                     /translation="MDNKQTNGFNDIIVKADITQNIWSTGFYDIGRELKSENTRQEKV
                     RLKYNGDTLHRGRKSRMASLIASR"
     gene            complement(17497..18135)
                     /locus_tag="PXF40_001557"
     CDS             complement(17497..18135)
                     /locus_tag="PXF40_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802886.1"
                     /translation="MKKILLLVLLLTLATQADEGNNTQVCAEQQHQIIAHYFKISQEK
                     LSARTLASACKTAPNNSTETLVSYAVIEPKYSKENYQNDENTPKWTLFVARVNDNAIL
                     QSWEQDMEIDASIDVNADSLKIDTARYILNDKVRAFGVRFNNAARGPSAPEYSANDHL
                     MLFVPEKEKLKLVFDYPMTFWSILDDKETKTETQTWYCKWITNRPTASMILL"
     gene            complement(18377..19096)
                     /locus_tag="PXF40_001558"
     CDS             complement(18377..19096)
                     /locus_tag="PXF40_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5802887.1"
                     /translation="MSKPNIYDESFSERMKWIAKNSFKDNYSEFARAVGVAQASLSRW
                     VKGEADPSRSNLVKIAEVSNVSLEWLATGKESKPQSENTSIVAREFERLEKMADDIVS
                     MINSFRTINVSAGFGSFNEGVTKPDGQEPYADSLLQSLGVKAHNCGVFWANGTSMHPT
                     IADSDQMLVDFSKREPRGDDKIYLVQNGESVWVKRIRKEWDYIELISDNESYRPIQIT
                     AEEAQNLQIIGQVVHIGHSLV"
     gene            19273..19551
                     /locus_tag="PXF40_001559"
     CDS             19273..19551
                     /locus_tag="PXF40_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5802888.1"
                     /translation="MSVLNDVKKTAQRDWHKADILAELRKKGWSLRSLAKAGNVSHNT
                     LKSVLDKPYPKMERLVANAIGVAPEVIWAGRTAERIERNRRPTLTNKF"
     gene            19596..>20363
                     /locus_tag="PXF40_001560"
     CDS             19596..>20363
                     /locus_tag="PXF40_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5802889.1"
                     /translation="MSELSLKTHYSVAELLSFKLSSLPSAHKNVLEKAIRENWQSQKR
                     KGRGGGVEYELISLPTEVQQEIRTKLLKLLPAEISKGELSVVRQNIDLEQITDKQLST
                     ADARIMVVRWFLMQEVQLGLSRTKTLDQVIAAVASSEIPAEICKAIMAGNSKAGGKLK
                     LSKRTLHSWVLAYEAGENSAERLKQMIPLKTQKRAVPERCGWLQAFLPFYQTFSNVAL
                     TQAYAQFAMQYEGEDLPTESQVRYALKQLPDYVVQQGR"
BASE COUNT         5875 a         4442 c         4171 g         5875 t
ORIGIN      
        1 tttctcatat ttatggaaaa atcgggcatt ttcgttgctt ttttatcgcc aagaaatgtg
       61 attttgttca catttatatc tataaattaa caaaaataaa acaatttgtt tgcaaaggcg
      121 gttcagttac cgaatgatag tcatcaactt ccactgtgga taaaaaagga gcaactcatg
      181 gtgaaacaac ataaaatgta tattaatggt gaatttgtgc ctgcgttaga tggtcgcact
      241 ttagcagtct ataaccctgc caccgaaaaa gctatctccg aagtccctcg tggcggagct
      301 gatgatgcca aaatcgctat cgatgctgct gaagccgccc aagaagcttg ggaacgttta
      361 ccagcgattg aacgaggaaa atatttacgt caaattgctg tggggattcg tgagcgtgcc
      421 gatgaaattg ctcgcactat ttccgaagaa atgggtaaaa ctctgtcctt agcaaccgtt
      481 gaggtacatt ttaccgctga ctacttagac tatatggcag aatgggcgag acgttatgaa
      541 ggggaaatta tccaaagtga tcgcccaaat gaacatattt tcctatacaa aaaagcgatt
      601 ggcgtcacca ccggcatttt accttggaac ttcccgttct tcctcattgc ccgtaaagcg
      661 gctccggcat tagtaacagg taatactatt gtgattaaac cgagtgaaga tgcacctaat
      721 aatgcgattc tcttttcgga aatcgtgcat caagtcggtt tacctaaggg ggtatttaat
      781 gtcgtcaccg gctatggcaa tgaagtcggg ccggaacttt caggcaatga aaaaatcggt
      841 atggtttcct ttaccggtag ccagtttgcc ggacaaaaag tgatggaagc cgccagcaag
      901 aatatcatta aagtcaattt ggaattgggc ggaaaagcac cggctatcgt attagacgat
      961 gcagatcttg agcttgctgc taccgctgta gtaaattctc gaatcatcaa ttcaggacag
     1021 gtttgtaact gtgcagaacg catttatgta cagagttcaa ttaaagagca atttgtccaa
     1081 aaattggtag agaaaatgca agcggtgaaa tatggtaatc cattagaaca acaagacatt
     1141 gatatggggc cgatggtaaa tgaaaaaggc ttgcataaag tgcaggaaat ggtgacacac
     1201 gcactgcatc aaggaggtaa tctggtatta ggtggtaacg tggttgaagg aacaggctac
     1261 tactttgagc caactattat cgacaatgta gataactcta tggatattat gcgtcacgaa
     1321 atttttggtc cggtcattcc ggttgcgaca tttgatacca ttgatgaagc gattcgctta
     1381 gccaatgatt gtgaatatgg cttaacctct tcggtttaca cgcaaaatat caataaagcg
     1441 atgaaagtaa tttcccgctt aaaattcgga gaaacttatg taaaccgtga aaactttgaa
     1501 gcaatgcaag gctaccacgc cggttggcgt aaatcgggta ttggcggtgc tgacggtaag
     1561 cacggcttag aggaatacct acaaactcag gtggtttatc tgcaatttga tgataaagta
     1621 tagattcttc taaaaactcc cacttatcaa aataagcggg agttttcttt taggttaacc
     1681 ttgtatcaaa attgcaaaca aaaatattct aatgttaagt aaatgtttaa taattattta
     1741 tggttaactc tttttggcta attaatttgc aatttaaatt aattgagtgc agaatgccat
     1801 tagccttttt tgaaatcaca ttccataaaa tggcttgatt aacacaacac aattatcact
     1861 caaattagga ttttcattat gagtattttc caacaaacca atccaaaccg ccgtcgttat
     1921 gggctagctg tatttatcgg gattattgcc ggtattattt cagcattcgt aaaatggggg
     1981 gcagaacatc ctttcccacc tcgtagccct atcgatctgt ttaccgctgc ttgcccgcaa
     2041 cctgtgttag atgcaatgaa tgccgcagca gaccaagtgg ctgccaaaac catcgcatta
     2101 caagaatgtt cacgtgcatt tttaaaccca ccacacgttt tcttacgtga ttatattggt
     2161 atcgatccaa ctgaagcagc atttaccttt gctgaccacg cgttcaactg gattggtgtc
     2221 acccatatga ttttctcgtt agtctttgcg attggttact gcattgtggc ggaaatcttc
     2281 ccaaaaatta aattctggca aggtatcggt gccggtatca tcgctaatat ttgtgttcac
     2341 tacatcacct tcccggcatt aggtttaaca ccaccggttg ctgaatggcc gttatatgaa
     2401 cacatttctg aattagttgg tcatattttc tggttctgga ccattgaggt gattcgtcgc
     2461 gatttacgta accgtattac gcgtgaacct gatgccgaag tgccgttaga tcaaccgttc
     2521 cgttaattta aaattagctc gatttataca aaagccgcaa tcacgttgcg gctttcttat
     2581 tttacaagcg gtcaaatttt catgaaaatt taccaaacaa aaagcacatt gtttcatgta
     2641 gcaatgcgga gcttggcttt ataagaaaaa tacaccaagt tggaacagtt tttcaatttc
     2701 atcgatctgt ttcttatcgt tcacaaaaat aatcacacgg tcattttctg caatcatggt
     2761 ggatttgtgg gcgataataa cttcttcgcc tcgcaccacc gccccaacaa ttgccccttg
     2821 cggtagtttt aattcacgga tttgtcgtcc aaccactttt gaagtggttg catcgccgtg
     2881 agcgataatt tctaccgctc ctgcaacccc aagtttgagt gaagaaactt gtaaaatatc
     2941 gccttttcta acgtaactag cgagagcaga aatagtagct tgttgtgggg aaatggcaat
     3001 atcaatagtg ccaccttgaa tcaggtgtaa ataggcaggg cgttgcacta aaataatcac
     3061 ttttttcgcc ccaagccgtt ttgccagcag ggcggacata atattcgctt catcatcact
     3121 ggtgacggca aggaataaat caatattctc aatatgctcc tcaaacagca actcttcatc
     3181 ggaggcatca ccggtaagca ccatcgtttt agatagtttt tctgctaatt tttcggctcg
     3241 aaccggattg cgttcgataa tttttacccg atactgatct tctaaatccc gagctaacga
     3301 agagccgatg ctccctccac cgacaatcat aatccgctta tgtgggcgat caagccgttg
     3361 tagttcactc attactgctc gaatatgttg ggttgcacag atgaaaaaga cttcatcacc
     3421 tgcctcaata atagttgaac cttgtggcac aatcgctttg tcttggcgga aaattgccac
     3481 gacccgagca tcaatatgcg gtaaatgatc acgcagggct gaaatcgggt aaccgaccaa
     3541 aggcccaccg taataggctt ttacattcac gatactgact aactcatcag caaaatgagt
     3601 aatttgcaac gcccccggat agtgaataag gcgtaaaata tcttctttga ctaaaatttc
     3661 aggggcaata atatggtcaa taggcaatac atcatcatta aacaaccgct ctcgttctct
     3721 cacataatca gcactgcgaa tacgggcaat tttggtcggc acattaaata aagtgtaagc
     3781 aatttggcaa gcgatcatat tcacttcatc actattagtt acagcaacta atagatcagc
     3841 atcacctgca ccggcatcac gcaaggtttg aggtgaagca tattcgcccc gaatcacctg
     3901 taaatcgtgt ttatctttga gcttgtctaa acgagttggg tcattatcca ccaagacaat
     3961 atcattgtct tcactcacca aattttctgc cagcgtagaa ccaacttgtc ctgcccctaa
     4021 aataattact ttcattactc tgctactttt tgtagttttg cgtagaagaa accatcacca
     4081 ccgtttggtt gtgggaagaa ctgtttttct aacacttttt cgccgttaaa atcgatttca
     4141 agttgttttg cattcggtgt atcttgtaaa aaccgttgaa tttgctcgct attttcttgc
     4201 ggtaacaccg agcaagtggc atataacaaa atgccgtttg gctttaacct ttgccataac
     4261 gccttgagaa tctcaccctg taatgtggct aattctgcaa tatcaccctc tttacgcaac
     4321 catttaatat cagggtggcg gcgaatgact ccggttgcgg aacaaggggc atcaagtaaa
     4381 atgcggtcaa acagcacacc ctcttcaagc cattcctcag gtttggaagc atcgccacaa
     4441 attacctgtg caatctgccc cagtcggact aagttttcac gcactcggct taaacggctc
     4501 tcttcaatat ccaacgccat aacctttgct ttcggtgctt tttctaaaat atgggtagtt
     4561 ttgccacccg gtgcggcaca ggcatctaaa acggtttcac cattttctgc cccgagcaac
     4621 tccgctgacc attgtgcgtg agcatcttgc acggttgccc aaccttgctc gaaatgtggc
     4681 agttggttca catttaccgc tctctccagc aataaagcac actttggcac gcaagcggtc
     4741 ggattttctg aattttttgc aaattcaggc tcaaccagct cgctaatcaa cgccgcataa
     4801 tcattggtct tgatatgttg ttgattgact cgaatccaca ttggtgggcg ttggttgttt
     4861 gcttcaacaa tttctcgcca gttcggatag gcttttttaa gtttattgac caaccattca
     4921 gggtggagcg tttgccaatg tttatctacc ttcgctaaga tttcttcttg ctctcgcaga
     4981 aaacggcgta gcacaccgtt agtcaaggct cggaagctat ccagttttag cgttttagtt
     5041 gcattcacta cctcatcaac cgcagcgtgt gccggcactc gcatataaag cagttggtat
     5101 aaacccacta acagtaagca atgcaccaaa cgggttttgc ctttcagcgg tttttcaact
     5161 aataatttga tgatcgattc caagcgaggc agcacacggc acactccgaa ggtgatttct
     5221 tgcactaagg gtaaatcttt tggttcaagc tgtttttgag cgtcaggaat caaggtggaa
     5281 agtgatttac cttgatctaa cacctgtaaa ataatggttg cacttattgc tctagaagaa
     5341 agtgctttga acgattgttt tttcataaat aaaaatgcca ttccgacaga atggcactat
     5401 tgtaactgaa tgcgggatta tcttaaaact aaaattggct tggtggtgtt gcgagccact
     5461 ttaaccgtat tagagcttaa gcccttcgca tttggtttgc tgcttgccag catcataatt
     5521 aaatccaccg acttttcatc ggcaatacgg caaatttctt cataaatcgt accatacgcc
     5581 acaatgtgct gcacttttga accttcagga aaatggtttt tggtaaattc gtgcaatttt
     5641 tggtttgctt cagccaccac ttctttatcg aaatttttcg gcaagaatgc agaaattaag
     5701 ctgttatcca ccggctcaat aatagacaca acccgataaa ccgcattcgg attttttgcc
     5761 gtcatttgta atgccgtatc taccacatat ttagcacttt ttaggtcggc taaatcaatc
     5821 gcaataagta atttgttata catatttatt ccgtaggggc aggtcctgtg cctgcccgaa
     5881 tattaactaa aatagcggac gggcacagga cccgtcccta catagcatat aaatactatg
     5941 caataacaca ctgttttttc actctacggc gttggtttgc cacaatacca aataccaaca
     6001 atagagcagg aatgaagatc caatctttag aaggagcatc ttgcggtacg gcaatgtagt
     6061 gaatggtttg atcccagttt aagcctgctt tagctgccgg agaatccatt tctaccatat
     6121 caatcaccac ttttggtgtt tctacgccat caactttgat tttttcatcg gtttgaatta
     6181 gcgttaagcc taagtttttc aaacgctctt cgccggttgc tccttccggt acaggtaatt
     6241 gagcgtagaa ctcaatttct ttaccgtaag ggtttaatcc ctctactttt aaagtaacat
     6301 tttgacctac tttgcttgca agcaactgtt cttcaaactg caccggctcg atatgacgtt
     6361 cagacggata aattctgtcc ataaagaagc ccggacggaa caaggcgaaa gcggctacaa
     6421 ccagcaacgc cgtttcccac catttgtttt tagtcacaat atattgcatt gtagcagagg
     6481 taaaggcgag aaccccaaca gttgcggtaa taaacacaac ccagccgtgc cccggataac
     6541 gcagatcaat taataataaa tcggtattaa aaataaataa gaacggtaaa atgacggttc
     6601 ttaaactata tttaaatgcc accataccgg tattaatcgg gctaccgcct gaaattgctg
     6661 ccgcagcgaa cgaggctaaa ccaacaggtg gagtcacatc tgccataatc ccaaaataga
     6721 atacgaataa atgcaccgca atcaacggca cgattaaccc gttttgacga ccgacttcca
     6781 tgataaccgt tgccattaat gatgacacca caatgtagtt tgcagttgtc ggtaagccca
     6841 ttcccaaaat taagctgaat acggctacca agatcaacat tagcacaatg ttgcccattg
     6901 ataggagttc aatcacactt gaaagctgaa ccccaaagcc cgttagtgcc acaacgccga
     6961 caataatccc tgctgttgcg gtagcgaggg cgataccggt catattacga ccgccagcct
     7021 caaggctatc taccacatct cgaacacctt gtttgataat ctctttggtt acgctctctt
     7081 tacggaagaa attcagtaac gggcgttggg ttaattgaat aaaaattaag gtaatggttc
     7141 cccagaatgc ggataagccc ggcgaaagca tttccaccat taagcaccaa agtagcacaa
     7201 ccacaggaat aaggtaatgt aaacctgcat ttacggttgg ttttcttttt ggtagagaaa
     7261 caatttctga gtttggatcg tccgcttcta aatcagggta gcttgccaca cggcgaatag
     7321 ccagtagata ccataagcct aagaaagcac agacaatcat aaacgcataa tcttctgcca
     7381 catcacgaat ccaacctaag ccgtagtaaa cgccaatcgc taatcctacg atcactaaaa
     7441 ttgaagctac ggttcttagc aagaagacta aaatcgggct tggctcttcg gctcttggta
     7501 agccttgtaa attcatctta caagcttcta aatgcacgat atacaccaac gcaatatacg
     7561 aaattaacgc aggtaagaag gcgtgagtaa tcagctggct atacggcata ttcacatatt
     7621 cgatcatcaa gaacgctgca gcccccatta ccggtggcat aatttgaccg tttactgatg
     7681 aggcaacttc caccgcaccg gctttttctt tggtaaagcc gacccgtttc atcattggaa
     7741 tagtgaatgt acctgtcgtc acgacgtttg caatcgaaga gcctgaaatc aagccggtta
     7801 aagcggaaga aaccaccgcc gcttttgccg gaccaccacg caaatgccct aaataggcaa
     7861 aggcggtttt aataaagtag ttacctgctc ctgctttatc gagcaacgcc ccaaataata
     7921 cgaacaggaa cacatatttg gtcgaaaccc caagggctac accaaacacg ccttcagtgg
     7981 taatccattg ttggttgata atttgagaaa gcgaacctga gcggtggctt acaatccaat
     8041 ctgccgggaa atattgcccg aagaagttat agatcaggaa tacaatcgca ataatcacaa
     8101 gcggtaagcc aagactacgg cgggtcgctt ccagcaccaa taaaatccct aaacagccgg
     8161 cgataatatc ttgcgtattt ggcgctccaa aacgtttcac caaaccttca tagaagaaaa
     8221 tataatacaa cgctaaccca gctcctacga tggcaaacac ccaatctatt ttaggaatat
     8281 gatgtttagg cgagctggca aaagcagggt aagataggaa cgccaagaac attgcaaagg
     8341 ctaagtggat agaacgggct ttggtgtcgt ccaccaccac attcaaatta atgcctgcgt
     8401 gagtaagcca ttcttggaat acaaacggca atggagaagc ataataaatt tggaacacag
     8461 accaaagaat ggcgacatac acaatggctt ttttcgcaag accggacggg gttcgccccc
     8521 cactgtcatt ggaggcaacc atatcttgta ggtcatcgta atcaacctta gattcaactg
     8581 acataaagac tcctcaaaac gcaagcggtc attttcttat taaattttac aaatttcctc
     8641 aaaaaacaac cgcttgctcg tgaaaacact gttgataagt tatcaattaa aggtgaaaat
     8701 cgataactta tcaacagttt caaaaaagca aaaaaccagc acgctaaaaa acgtgctgat
     8761 tgaatcaaat tacagaaagg aaatattact taatccaacc tttctcttta tagtaacgaa
     8821 ttgcaccttc gtgtaacgga gcagaaaggg cgtttttgat catctcttct tgttttaagt
     8881 gttcaaacgc cggatgtaaa cgtttgaaac ggtcgaagtt atcaaatacc gctttggtta
     8941 cattgtacac tttatctgca tccacatcgg cagaagtcac taacgttgca tatacaccga
     9001 aggtttctgt cggctcatcc gaacctttat ataaaccgcc cggaatcgta gctttggcat
     9061 aatatgagtg atctgccact aatttatcaa tttcagggcc ggttaccggc actaatttcg
     9121 catcgcaaga agcggctgct tcttttaacg caccattcgg gtgacctacg ttataagtga
     9181 tggcatctaa gttgttatca cacattacag atgccatttc tgccggtttc aattcagaag
     9241 ccactttgaa atctttatcc gtccagcctt ttgccgctaa aatcacgttc attgttgcac
     9301 gagtaccgga acccgggtcg cccacgttta cacgttttgc ttttaaatca tcgaacgatt
     9361 taatgcctga atcggtacga gccattactg taaacggttc cgggtgaagc gagaaaatgg
     9421 cacgaatttt atcgtttttc ttaccttcaa atgagcttga gccgttatag gcgtggtatt
     9481 gccagtctga ttgtgcaatc cccatatcca tttcttttgc tgcaatcgca tttaagtttg
     9541 caaccgatgc ccctgttgaa ggagcgttac attttaaacc tgtttttgct gaatcacggt
     9601 ttactaattg gcaaatagat tgacccacaa cataataaac accggtttga ccgcctgttc
     9661 cgatagtcac aaatgtttca gccgcttgaa cagatgctgt tcccatcaca aggcttgcaa
     9721 ggaaagaaag tttgactaat tttttcattt ttaactccta aaattaagga tcagaaaaca
     9781 aagatttatt gttttgagcc actgctcaca ctacaagaga tacaaaactt ctttgagttg
     9841 catttgcctc ttagagcttg tttttagcat agattttata attagtaaat ttattttttc
     9901 gcataaaaaa atctatgcct aatgccacaa gctaaaatgt ttcactatct cttaacaaat
     9961 gcacatcgcc ttttcgtctt aaaaaaccgc tacgatcaaa atattcaatt aattgtaccg
    10021 tcaattttcg cccatactgc aactcatctc gcaactggtt caccgaaatg ctgccgtttt
    10081 gggcgataaa atctttaatt aacgttgcaa attgcccgat ttgttcgctt aataaaaatc
    10141 tatctttgac gattgggatt aaatagccca atttcccgac tttatacagc aaattccgca
    10201 tttgggtttc atcaatcgag agctggcttg caatatccct cacccaaaga gcttgattgg
    10261 ttgcctcaaa cagcggtcga atttgttgcc aaatttgcaa ttcatcggcg ttcaattcga
    10321 ttcgatgttc cggcaaatgt aaccaaccac gactattgac caaggctttt tgctccacca
    10381 aatcctcaat aaattgattt gccaagtttt caggcaaatc caataacgct atgcgatata
    10441 aacgagcttt ggtcacgccg atttgatctt gatgttgcag gtggtattct gccatttttt
    10501 ccaacacccg ttgctgggct tgagctttaa aatccgaatt aaataaccat ttagacgaga
    10561 catcaaaccc cagttttgca atatcctctg caaaacattg ctccgcccat aacagcaagg
    10621 ataaatccat cgctctgttt tgcagataga gatcaaggcg tgtcgcaaag tcattacaag
    10681 cggtggtttt tgctaaattt tttaccaaag ctaaacgggc ttcggtacgt ttatgccgtt
    10741 ttggtgagtg aatttccagc acctccgctc cggctaacgt taggctgtca tcaccgctgc
    10801 ggatgatcaa cttatcacca acggcaatat gaagtggttc atctaaaatc acttctgcaa
    10861 aaaattgctg atttttgacc gcttgttgcc cctcaagcaa attcaatttg ccggtaatgt
    10921 gcgaagcaaa atggtaaaga tgcacaatgc tgttttcttt gaaggcttga ttggcagtga
    10981 gttgaaccgt aatgcgatcg gtggcaaatt tcggctcaag ctcggtaatc caatcgcctc
    11041 gcttgatttc ctctttttcc acgttagcga tatttaacgc caaacgttgc cctgccactc
    11101 ccgtttccga aggcgtattt tgggcgtgaa tcgctttgac ccgcactttt ttaccattcg
    11161 acaaaaataa ctcagagcca acgctcactt ttcccgccac cgttgtgccg gtaacgacca
    11221 accctgctcc tttcacatta aacacacggt caatcgcata acggaacggt ttatgggttt
    11281 gggtatgttg ttgatttaat tgaattaaat gtgcttttaa ttcttcaatc ccttgttgcg
    11341 tttttgccga agtaacaaag gtttttgctt ccgctaaaaa cggatagctt gttttcactt
    11401 gctcaattaa gtggctgatt tgagtttctt ccgcccgatc tgccttagta atcacaatca
    11461 taatatgctg gaaattcagc aggtggagaa tatccaaatg ctcttcggtt tgtggcttaa
    11521 tcccttcttc ggcagaaatc accaacaggg cgtgttgaat gccgccaagc cctgccagca
    11581 tattagataa aaaacgctga tgacccggca catcaataaa ccctaaaata tcgttctcaa
    11641 tcggtaaata ggcatagccc aaatcaatgg ttagcccacg tttttgttct tcgggcaaat
    11701 gggcggtgtt agtgccggtt aaggcttgta aaagcgatgt tttgccgtgg tcaacgtgac
    11761 cggcggtgca gatgatcatt gatagtcctt ataaaaatga gtaactattc tggcgagcag
    11821 atttaaaatc tacaatatag acattttcct gaccaatcag gaactttact tggtacttac
    11881 cgtttaaaat gggaatttct tttttcttgc gaagtcgata aacatcggca gtaaaggaaa
    11941 gtttatccac ttcacttttt attgcatcat aaaattgttc tgcaataatc gggttttggg
    12001 attgttgtaa tatataatct gcttgataaa acaattttat ttctgctttc tgtagccaaa
    12061 caatattgta atcaaacttc atcatttttc cgtgattccc aattttttgc gtaaatcttc
    12121 catcacctga gcgtgggatt tagtttcaat taagccattt tctaattgat gtaataaatc
    12181 aagttcatca ttagtataaa aactttgtgg cttatctgtg cgtaattttg ctaaatcttg
    12241 tgcgagtatg agttccatat ttccccctta caaacttaga ttattcaata ttgtaacctg
    12301 ataaaactaa agttcaagga gtgtatttaa ggcgataacc gctctttttt ccactcatta
    12361 ttttccaacc aataatgaat gcggtcgtgt agccggctac ttctgccttg ccagagttca
    12421 atactgtcgg gaatcagaat atagccaccc caatgcggtg ggcgaggcac tgaaagtgga
    12481 tatttcaatg caaattgagc tgattttagc aacaaagcct tgtagttttc gataggctga
    12541 ctctgctcgc tcgcccaagc ccccaaacgg ctggtgtaag gacgagagtc aaaataggca
    12601 tcggattctg cctctggaat ttttgctatt ttcccttcaa tccgcacttg acgttgtaat
    12661 tctgcccaaa agaaggttaa acatccaaaa ggattatcgg caatttccca ccctttacgg
    12721 ctttgataat tggtaaagaa cacaaagcct tgtgaattta cctctttcaa cagcaccatt
    12781 cggctacttg gtcgcccgtt tgctgcaacg gtagcaatat tcattgctgt cggctcattc
    12841 actttggcat tgattgcctc actcaaccat tgttcaaatt gggtgattgg gtttgagtga
    12901 caatctcgga ttgaaagcac ttttttggtg taatcttctc gaatgtggtg cagatccata
    12961 aggattcctt tatcttattc taaataatcg gacaggcaca gtctgcccta ccaaaattaa
    13021 tattccaaca tctcaatcaa cttatcaaac tccgcgaccg agcgtaaatc taaccaaaat
    13081 ttctgctgag caaaacgccc gataatcggg cttgggtagg ttttaaattg ttgttccaat
    13141 gcaattaaat cgctctgttt ttcagcggaa atagtcactg ccaccgaagg taaggtttct
    13201 gtgggtaacg caccgctgcc gatttgagcg aggcttagct caatttgcaa aatataagca
    13261 gaatttaacc gcttgtgtag tgcctgtttt aatcgctctg ctttgtgttg caaggtttca
    13321 agcggttgag tgagtaaatg aagagtcggc aagttatcgg ttaattgctc cggaaataag
    13381 tagtggcgta gcgttgcctc aagtgccgat aaaatcactt tatcgcaacg tagcacccgt
    13441 tttagcgggt gttgttgcag ttggctaatc atcgcttggc taccgacaat aatgccggct
    13501 tgcggcccgc ctaataattt atcgccagag aaggaaacca aatctacccc agccgctact
    13561 ttttgctgaa cctttggctc agcaggcaaa ttaagagctt gcatatcagt tagcgaacca
    13621 ctgcctaagt cggtaatcac aggcaggtta aactctttac cgagagccac caattcctct
    13681 tccgacaccg aactggtgaa cccctcaatg tggtagttac tggtgtgaac tttcattaaa
    13741 aaggcggtat tttcggtgat cgcgttgcga taatccttta aatgagtgcg attagtcgta
    13801 ccaacttcca ccaatttgca accggcttga gccataatat ccggaatgcg gaatgccccg
    13861 ccaatttcca ccagctcgcc acgggaaacg atgacttcct tgccttgtgc gaaggttgct
    13921 aacatcaaca acaccgctgc cgcattatta ttcacaatgc aagcggcctc cgctccggta
    13981 agtatttgca acaactcgga aatgtagtta tctcggtgcg agcgcttgcc tgcttcaata
    14041 tcaaattcca acgccacatt gtttcgcatt gcgttggttg ctgcctgtat cgccttttcc
    14101 gaccacaacc cacgccctaa gttggtgtgt aacaccgtac cggttaagtt gaacacggaa
    14161 cggattttca cctcactcaa cgcttgcact ttttgttcca gccttataaa aaacaggttt
    14221 tcatcggcaa taaaatccgg caaggcttgc tgttgggaaa taaattgacg tgcttgagta
    14281 agcaaactcc tagcttgttc agccacgctg gaatatgcaa atttttggca taattcgacc
    14341 gcttgtggct ttttcaacaa gaggtcgagc gagggaattt ggcgaaatag ttgttgcata
    14401 atgtgaatga ttgagagaat attttggaca attctaataa ataaagtaca atattgccaa
    14461 tttttcggaa gtgcgtcatc tccggtgagg tggcaggact tcaaatcctg ttgaggacgc
    14521 cagcgttctc gggtgggttc aactcccatg cacttccgcc acatttcaaa agccgttaat
    14581 ctttaacggc tttttgcatt tctgccacat tctctctttc cgttttgata aaaaatgaga
    14641 cttagctcac atttttttat ttttctgttt gtagtaaaaa tttattaaat tataattatt
    14701 tggagtattt tttcacaaac aaaatctagt ccattgacta ccttttgaac ataaaaaagg
    14761 aactgttatg tcaacactat ctcgtgattc tattttaagt caaattcaaa acgggctgat
    14821 tgcctcctgc caaccggttg atgacggccc catggataaa cctgaaattg tcgccgcaat
    14881 ggcagcagcc tctgtgattg gtggtgctaa aggcattcgc attgaaggtg tcgataattt
    14941 aaaagccgct cgtgcggcag tgaatgtgcc gattatcggc attgtaaaac gtgatttgcc
    15001 agattcccct gtgcgtatta cgccattttt agaagatatt gatgccttag ccgaagccgg
    15061 tgccgatatt attgcggtgg acggcacatt ccgcacccgc ccggtcagca ttgaagaggc
    15121 ggtaaaacgc attcacgaaa aaggttgctt ggcaatggcg gattgctcca cccttgaaga
    15181 aggtttacat tgccaacaat taggctttga tattgtgggt agtacaatgt ctggctacac
    15241 cggtggcgaa atgcctgatg agccggacta tcaattagtg aaagatttaa aagctgccgg
    15301 ctgtaatgtt atggcggaag gtcgctacaa cacgcctgaa ctggcaaaaa cggcgattga
    15361 aatcggggcg gattacgtta ccgttggatc ggcattgacc cgcttagagc atattgtgag
    15421 ctggtttgcc gactctgtaa aatcggctca aaaataggag ctgcttatgc gttgtttagc
    15481 aatagacatc ggtggcacga aaattgccac ggcaattgtg caacacaatc aagtgtcaca
    15541 acgccaacaa attcagaccc cgactgataa accacaagct gatcaggcag gcagtttgca
    15601 tcaagcgatt ggtgagataa tgcaacatta tcaagggcaa tttgattttg tggcagttgc
    15661 ctcaacaggc attatcaata aaggggtgct taccgcatta aatcctaaaa atttaggcgg
    15721 attggcagaa tttccgttga aacaaagcat tgaaaaacat accgataagc cgattgcatt
    15781 attaaatgac gtgcaagcgg cggtgtgtgc cgaatattta aatgaagacc aacaagcggt
    15841 caaaaatttt gtatttatta ccgtttccac cggcgtaggc ggcggcatta ttttaaacgg
    15901 cgaactgcaa atcggcagta acggcattgc aggacatatc gggcatactc tagccgatcc
    15961 gaacgggcct ctctgtggtt gtggacgagt cggctgtgtc gaagcagtcg cagcagggcg
    16021 tgcaatagag gcagtttcca gccaatggga aaagccttgt tcaccgaaag aggtgttcga
    16081 gcgattccgc caaggcaacc cacaagcggt cgaattagta caaaaatctg caaaagcgat
    16141 tgctaattta attgcagatt taaaaatcag tttagatata caaaaagtgg tgttaggtgg
    16201 cagtgtgggc ttagcggaag ggtatttacc gcaggtgtcc aactatttag ctgaaatgcc
    16261 gagcgtatat cattgcgtat tggaaaatgc tctatccggg caagatgccg gcttaatcgg
    16321 tgcggcttgg tgggcggaaa accaacttaa tcaaggtttt actctttaac aaattctaac
    16381 tccggagatc caaatgaaaa acttaaaagg tatttttagt gcgttactcg tctctttcaa
    16441 cgaagacggc accatcaacg aaaaaggctt acgccaaatt atccgccaca acatcgacaa
    16501 aatgaaagtg gacggtttat atgtcggcgg ttcaaccggt gaaaacttta tgctttctac
    16561 cgaagagaaa aaagaaattt tccgcattgc caaagacgaa gcgaaagatg aaatcgccct
    16621 tatcgcccaa gtcggtagcg taaacttaaa agaggcggta gaactgggta aatatgccac
    16681 agaattaggc tacgacagct tatctgcggt cacaccgttc tactacaaat tcagcttccc
    16741 ggaaatcaaa aatttctacg aaaccattat tcgtgaaacc ggcaacaaaa tgattgttta
    16801 ctccattccg ttcttaaccg gcgtaaacat cggtgtgagc caattcgctg aattatttga
    16861 aaacgaaaaa atcatcggtg taaaattcac tgccggcgat ttctacctgt tagagcgttt
    16921 acgcaaagcg ttcccgaacc acttaatcta cgcaggtttc gatgaaatga tgctaccggc
    16981 aacggtatta ggtgtggacg gtgcaatcgg ctcaaccttc aacgtaaacg gtattcgtgc
    17041 aagacaaatc tttgaattag cccaacaagg caaaatcaaa gaagcatttg aaatccaaaa
    17101 tgtaaccaac gatttaatcg aaggcatttt aggcaacggt ttataccaaa ccatcaaagg
    17161 cttattggag ttagaaggtg tgcaagcagg ttactgccgt gagccgatga cgaaagaaca
    17221 aactccggca caaaaagaag tgaccaaaca gttaaaagct aaattcttgt aatttaagtt
    17281 gcaaaaggct aaacgaaaat caccgcttgt agtaacaagc ggtgattttt tctcaacgac
    17341 ttgcaattaa tgaagccatt ctgctttttc taccacggtg taacgtgtca ccattatatt
    17401 ttaatcgcac tttttcttgg cgagtatttt ctgatttcaa ctctctacct atatcataaa
    17461 accctgtact ccagatattt tgagtaatat ccgcttttac aataatatca ttgaagccgt
    17521 tggtctgttt gttatccatt tgcaatacca agtttgtgtt tccgttttgg tttctttatc
    17581 atctaaaata gaccaaaaag tcatcgggta atcaaaaaca agttttaact tttctttttc
    17641 cggcacaaat aacatcaaat gatcatttgc agaatactca ggagcacttg gaccacgagc
    17701 agcattatta aacctcacgc cgaaagctct tactttgtcg tttagaatat aacgggcggt
    17761 atcaatttta agactatctg cattcacatc gatagaggca tcgatctcca tatcctgctc
    17821 ccacgattgc aatatcgcat tatcattcac acgagcaaca aaaagcgtcc acttaggtgt
    17881 gttttcgtcg ttttgataat tttctttgct gtatttaggc tctattaccg cataactcac
    17941 taaggtttcc gttgaattgt taggagctgt tttacaggca gaagctaaag tacgagcaga
    18001 aagtttctct tgagaaatct taaagtaatg agcaataatt tgatgttgtt gctcagcaca
    18061 aacctgtgtg ttattacctt catctgcttg agttgcaagc gtaagtaaaa gaactaagag
    18121 gagtatcttt ttcatataga tttatccgta tagaaagata actcattcta tggggtactg
    18181 actctttttg catagagaga aagaaaaaaa tttggtcgga aaaataacgg cgagcctagc
    18241 gaaaacaagg gttcgccgta attttatggg ggaagctatg taaaaaacaa aatgagcagg
    18301 attagaaaaa aatgagcagt ttttgcgata ttttttgcat aggtttgatc ggttttaaaa
    18361 ctattttaaa tctgttttaa actaaagagt gtccgatgtg gactacctgc ccgatgattt
    18421 ggaggttttg agcttcttcg gcggtaatct gtattgggcg gtaggactcg ttatcgctaa
    18481 ttaattcaat atagtcccat tcttttctaa tccgtttaac ccatacgctt tccccattct
    18541 gcacaagata aatcttatca tcaccacgag gctctcgttt gctgaaatct accagcattt
    18601 ggtcactgtc tgcaatggta gggtgcattg atgttccatt tgcccaaaac acgccgcagt
    18661 tgtgggcttt tacgccgagg ctttgcagca ggctgtcggc gtaaggttct tgcccgtctg
    18721 gcttcgttac gccctcgtta aagctgccaa agcctgctga aacgttgatt gttctgaagc
    18781 tgttaatcat tgaaacaata tcatcagcca ttttttctag tcgctcaaac tctcttgcca
    18841 caatactggt attctctgat tgtggtttgc tttccttacc tgttgccagc cattcaaggc
    18901 tcacatttga cacctctgct atttttacaa gatttgaacg agatggatct gcctctcctt
    18961 ttacccacct agatagtgat gcttgggcta cccccactgc tcttgcaaac tcactgtaat
    19021 tgtccttaaa gctatttttt gcaatccatt tcattctttc tgagaagctc tcatcgtaaa
    19081 tgtttggttt actcatcttt tacgtttcca ttaataaagt tttactcgta aaacatactc
    19141 ataaaccatt gatttttaag ttatttatga ataaagcaaa aatattttag atgtttttat
    19201 gttttacggt tgatttgttt aaagttttac ggttaaatac acgcatcaaa tagataaaaa
    19261 gaggtgtatc gaatgagtgt attaaacgat gttaaaaaaa ccgcacagag agattggcat
    19321 aaagccgata ttcttgcgga acttcgtaaa aaaggttggt cacttcgttc tttggctaaa
    19381 gcaggcaatg ttagccataa cacgctgaag tctgttttag acaagcctta ccccaaaatg
    19441 gaacgcttag ttgcaaatgc cataggggtt gcccctgaag tgatttgggc tgggcgaaca
    19501 gcagaacgca ttgaacgtaa tcggcgacca actttaacta ataagtttta atcataaatg
    19561 atctttaacg taaaagatat aggagaagaa catttatgag cgaattaagt ttaaaaacgc
    19621 actattcagt ggctgaattg ttaagtttta agttatctag cctaccaagt gctcataaaa
    19681 atgtgcttga gaaagcaata agggaaaact ggcaatctca aaaacgcaaa ggcagaggcg
    19741 gcggggttga atatgaatta atcagtttac ccaccgaagt ccaacaggaa atccgcacca
    19801 agttactcaa acttcttcct gctgaaatca gcaaaggcga attgagtgta gtgcgacaaa
    19861 acattgattt ggagcagata accgataaac aactttctac ggcagatgct cgcattatgg
    19921 tggtgcggtg gttcttgatg caggaagtgc agttggggct aagccgcaca aaaacgctag
    19981 accaagtcat tgcagcggtg gcaagcagtg aaattcctgc tgaaatttgc aaagcgatta
    20041 tggcgggcaa tagtaaagcc ggtggaaagt taaagctatc taaacgcacc ttgcatagtt
    20101 gggtgctggc gtatgaggca ggcgaaaatt cagcggaacg gttaaaacag atgataccgc
    20161 tgaaaacaca aaaacgtgcc gtgcccgagc ggtgtggttg gttgcaagcc tttctgccgt
    20221 tttatcaaac ctttagcaat gtggcactca cacaggctta tgctcaattt gcaatgcagt
    20281 atgagggcga agatttacct acagagagcc aagttcggta tgccttgaag cagttgcccg
    20341 attatgtggt gcaacaaggg cgg
//
LOCUS       DANMCL010000050        20031 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.050, whole genome shotgun sequence.
ACCESSION   DANMCL010000050 DANMCL010000000
VERSION     DANMCL010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 20031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20031
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.050"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            141..389
                     /gene="rpsP"
                     /locus_tag="PXF40_001561"
     CDS             141..389
                     /gene="rpsP"
                     /locus_tag="PXF40_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HDL5802890.1"
                     /translation="MVTIRLTRGGAKKRPFYQIVVVDSRSPRDGRFIERIGFFNPLAA
                     GQAERLRLDVAKVDAWVAKGADLSDRVASLVKEARKAA"
     gene            422..949
                     /gene="rimM"
                     /locus_tag="PXF40_001562"
     CDS             422..949
                     /gene="rimM"
                     /locus_tag="PXF40_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005626427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HDL5802891.1"
                     /translation="MSEQKIEVVGKLGSTYGIRGWLRLYSSTEQTESIFDYQPWFLKI
                     KGQWQQVELESWRYHSNDLIVKLKGTEDREAAQLLTNAEIGVDLSVFPELEEGDYYWH
                     DLIGCSVVNLEGYTMGTVAEMMETGSNDVLVVRNNGKDAFGKQERLIPFLYEQVVKRV
                     DLATKTITVEWDAGF"
     gene            994..1749
                     /gene="trmD"
                     /locus_tag="PXF40_001563"
     CDS             994..1749
                     /gene="trmD"
                     /locus_tag="PXF40_001563"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HDL5802892.1"
                     /translation="MWIGIISLFPEMFKAITDFGVTGRAVKQNLLQVECWNPRDFTFD
                     KHKTVDDRPYGGGPGMLMMVQPLRDAIHAAKKAALAVEGGEAKVIYLSPQGRKLDQNG
                     VQTLASNQKLILICGRYEGVDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFV
                     PGVLGKQASALEDSFAEGLLDCPHYTRPEVLDGMPVPEVLMSGHHEQIRKWRLEQSLE
                     RTWLRRPELLDSLALTDEQRVLLAKIKKQHKIS"
     gene            1776..2126
                     /gene="rplS"
                     /locus_tag="PXF40_001564"
     CDS             1776..2126
                     /gene="rplS"
                     /locus_tag="PXF40_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HDL5802893.1"
                     /translation="MSNIIKQLEQEQLKQDLPSFRPGDTLEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTLRKVSNGVGVERVFQTHSPVIDSISVKRKGAVRKAKLYYLRE
                     RSGKSARIKERLGD"
     gene            2282..2638
                     /locus_tag="PXF40_001565"
     CDS             2282..2638
                     /locus_tag="PXF40_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802894.1"
                     /translation="MKQLSIRLPDDEFTFIKTFASAHKLTLQNFVMSAIQAKVAEMSA
                     KNKISEESNIHQPLSKDEKIMLNEAKVFYSARSHLKAENVILPSDFMEQIKSGCGAEK
                     MAEMMGYTKEDWESMK"
     gene            2640..2963
                     /locus_tag="PXF40_001566"
     CDS             2640..2963
                     /locus_tag="PXF40_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802895.1"
                     /translation="MGQITFSNIFTKVIFENVLSASTKEKIKQMLFQSVVALPPLHSE
                     RKMILQLKKQKITIFYQVIEEQSVQILAYQFGGTDKLTGVSKAHFKTLDAIFQMTDEE
                     KEGKF"
     gene            complement(2973..3305)
                     /locus_tag="PXF40_001567"
     CDS             complement(2973..3305)
                     /locus_tag="PXF40_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL5802896.1"
                     /translation="MQIEQYQQWVRQFYQQQGWYERSPFMRVTYLAEEIGEVACAVRA
                     IEIGRERPDETEASQQQKRDNLIEELGDVMDNLFVLADKYGISMTEVLERHQAKFEKR
                     YLQKNMEK"
     gene            complement(3398..4594)
                     /locus_tag="PXF40_001568"
     CDS             complement(3398..4594)
                     /locus_tag="PXF40_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HDL5802897.1"
                     /translation="MNIPFCLPENISPETFLREYWQKRPLLIRNGLPQIVGLFEPEDI
                     LELALEEEVTARLIQCENEKWSVKSSPLVEEDLEELPVQWSVMVQNLEQWSPELGELW
                     QAFGFIPQWQRDDIMVSCSPLNGTVGKHYDEYDVFLVQGYGQRRWQLGKWCDPSTEFK
                     PNQPIRIFDDMGELVMDEVMNPGDVLYVPSRMAHYGVSESEQGLTFSFGLRYPNATDL
                     LENLCKTIEQQADNINSSEFHLPFRLTPNEQPNALLDPKMVKMFKHQLIDLLQNSEQF
                     DELLTHSVATAASSRRYELLQTDNEYYPDEVQEILEAGGWLQQDANVKILYTENPQRV
                     YVNGEWIDELNEAEMALLIRIANGDSISWNKLASKVQDQAELELMLDTICDWLDSGWI
                     ILSEAE"
     gene            complement(4743..6086)
                     /gene="accC"
                     /locus_tag="PXF40_001569"
     CDS             complement(4743..6086)
                     /gene="accC"
                     /locus_tag="PXF40_001569"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HDL5802898.1"
                     /translation="MLEKVVIANRGEIALRILRACKELGIKTVAVHSTADRELKHVKL
                     ADETICIGPAPSVKSYLNIPMIIAAAEVTNADAIHPGYGFLSENANFAEQVEKSGFIF
                     IGPTADVIRLMGDKVSAINAMKKAGVPCVPGSDGPVGNDPKKNKEIAKRIGYPVIIKA
                     SGGGGGRGMRVVHHEKDLEESIAMTKAEAKAAFNNDMVYMEKYLENPRHIEIQVLADT
                     HGNAVYLAERDCSMQRRHQKVVEEAPAQGITPELRQFIGERCANACREIGYRGAGTFE
                     FLYENGEFYFIEMNTRLQVEHPVTEMITGVDLVKEQLRVAAGLPLSITQDDIKVKGHA
                     IECRINAEDPNTFLPSPGKITRLHVPGGLGVRWDSHIYSGYSVPPHYDSMIGKLITFA
                     ENRDIAIRRMENALSETIVEGIKTNIPLHTQILADKEFRKGGTNIHYLEKKLGLK"
     gene            complement(6158..6625)
                     /locus_tag="PXF40_001570"
     CDS             complement(6158..6625)
                     /locus_tag="PXF40_001570"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HDL5802899.1"
                     /translation="MDIRKIKKLIELVEESGITELEVSEEEGTVRISRAAPAVAPAAV
                     QYAAAPVVAPAAPQVASTVPVAAPAEAPKAAETSGHAVLSPMVGTFYRSPSPDAKPFV
                     EVGQTVKIGDTLCIVEAMKMMNRIESDKAGVVKEILVNDGEPVEFDQKLFIIE"
     gene            complement(6878..7660)
                     /locus_tag="PXF40_001571"
     CDS             complement(6878..7660)
                     /locus_tag="PXF40_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HDL5802900.1"
                     /translation="MAVKNEQFIVICNGVFRLFGNIVKILSYPFHALFPKKRFTIPEY
                     SPAKIQSSIPSKITKTIWQTNYSNKVTLPMYANYLFNRLMSLSYDYRYVSTEEREAYI
                     KANADERTFNAYSKLTDGAAQADFWRIFTLLREGGIYIDIDGHLVYPLSKIIGENDSE
                     VLIKRRDKYTNFFLASEAGNWILKDTLELIISNIENRRIEGGVFVMTGPDTLNNAIGD
                     KEVNFRRDKVTCAQGTFTNEYFQYIDKPGSKWNYKKNEDLLK"
     gene            complement(7670..8107)
                     /gene="aroQ"
                     /locus_tag="PXF40_001572"
     CDS             complement(7670..8107)
                     /gene="aroQ"
                     /locus_tag="PXF40_001572"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HDL5802901.1"
                     /translation="MKKILLLNGPNLNMLGKREPQIYGSQTLADIENHLKKLAAAQDV
                     ELESFQANGEEPIINRIHQAFQHTDFIIINPGAFTHTSVAIRDALLSVSIPFVEVHLS
                     NVHSREPFRHHSYLSDIAKGVICGLGAKGYEYALDFAISHLKA"
     gene            complement(8193..8561)
                     /locus_tag="PXF40_001573"
     CDS             complement(8193..8561)
                     /locus_tag="PXF40_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5802902.1"
                     /translation="MAFTIRKMVEQDTHQVFPLMQKLAVFEHYIDSFAITPEVVMESG
                     FRKSPPDFYCLVAENASNIIGILVYYFLPYTAQNRPAIYMKELYVDETARNQKVGEAL
                     MQALKNEAKAHHCKTIKSLE"
     gene            complement(8621..9445)
                     /gene="dapD"
                     /locus_tag="PXF40_001574"
     CDS             complement(8621..9445)
                     /gene="dapD"
                     /locus_tag="PXF40_001574"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HDL5802903.1"
                     /translation="MSLQAIIEAAFERRAEITPKTVDAETKAAVEEVIAGLDNGSLRV
                     AEKKDGEWVVNQWVKKAVLLSFRIADNEIIDGAETKFYDKVPTKYGNYTEEQFKADGI
                     RAVPGAVVRKGSHIEKNVVLMPSFVNIGAYVGEGTMVDTWVTVGSCAQIGKNVHLSGG
                     VGIGGVLEPLQANPTIIGDNCFIGARSEIVEGVIVEDNCVISMGVFIGQSTKIYDRET
                     GEVHYGRVPAGSVVVSGSLPSKDGSHNLYCAVIVKKVDEKTLSKVGLNDLLRSIDE"
     gene            9593..10255
                     /locus_tag="PXF40_001575"
     CDS             9593..10255
                     /locus_tag="PXF40_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HDL5802904.1"
                     /translation="MENFANLLTGKTREHLVPLPNALSDKHYLQPQVVEAFLTLQHAA
                     KQAGFNLQPASTFRDFERQKGIWNAKFRGERKVHDDNGVAIDMAALSDLEKCKAMLRW
                     SAVPGASRHHWGTEIDIFDPDLLPENTPLLLEPWEYLEGGYFADLTKWLHVNAETFGF
                     YFPFDGKHSRVGFEPWHISYRPISNEYEQRFNDEILKAAWQDEEVAGKECLLEHFEEL
                     LK"
     gene            10252..11004
                     /locus_tag="PXF40_001576"
     CDS             10252..11004
                     /locus_tag="PXF40_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5802905.1"
                     /translation="MIQLINETQQHDKFRQICDKWQLVEDKSSPLALVLTEERLELRK
                     LDEPKLGAIAVNFVDGTMAHRRKFGGGRGEAVAKAVGIKGDYLPTVIDATAGLGRDAF
                     VLAAVGCKVLLVERNPIVAALLEDGLNRAYQDVEIGSFMQERMILADVRDISQLDPQS
                     QMAEVVYLDPMYPHKQKSALVKKEMRVFQHLVGADLDSDSFFLPAKGLAKKRVVVKRP
                     DYAPFLAEQKPDFSHTTKNHRFDVYLSHLKND"
     gene            11095..11931
                     /gene="ftsN"
                     /locus_tag="PXF40_001577"
     CDS             11095..11931
                     /gene="ftsN"
                     /locus_tag="PXF40_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HDL5802906.1"
                     /translation="MPQRDYVARSNEKKSKKNQKESNVKKILMRIIGVILFFGIGLWF
                     LKSSAPVPTVPSAPQPANSQTKSELPSRPEETWSYIRDLETRTVITDNSQTSQERLAQ
                     LTAEQKQQIEERRKQEEARLAAEQAQQKPATDVSATELAPKTEEVKSLTEEELAAKKA
                     QEQALAQKQAEEKRRQAELKKQQEAKKEQPAKIVASAATLADKAANQAGKFGLQCGAF
                     KNKAQAENMQARLAMAGFNARIASSADWNRVFVGPIGDRAATSRAQSNARSVAECVIV
                     AM"
     gene            complement(11973..13154)
                     /locus_tag="PXF40_001578"
     CDS             complement(11973..13154)
                     /locus_tag="PXF40_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HDL5802907.1"
                     /translation="MKTELDMIVIGGGMIGAATALGLAKQGLRLALLEKNPLPTFNPD
                     SDYDLRISAISMGSIQLLEKLGVWEQIVAMRSTPYTQLETWEIDGFNTLFSAADLGLE
                     KLGDMVENNVIQIALWEQLKQYPNCLQAVGFEQIFANKAGEYWEVTVDGNTFAAPLLI
                     AADGANSQVRQWAGIGLTAWQYRQHCLLATVTTEKPAPSGTWQQFYPTGPRAFLPLSG
                     NHGCVVWYDSPQKIAELKMLPAEKLGVAIEQHFPSRLNAELGNIQVQASGAFPLTRQH
                     AQHYVQNGVVLVGDAAHTINPLAGQGVNLGFKDVKTLLEVIEQAVKKGKNFASEQVLQ
                     RYEQKRKPDNLLMQTGMDVFYKAFKTDLLPLKIARNVGLVLADKVSPIKKQALKYAIG
                     I"
     gene            13261..13599
                     /locus_tag="PXF40_001579"
     CDS             13261..13599
                     /locus_tag="PXF40_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802908.1"
                     /translation="MSCKTHANHEHEHGEGCGHTAIKHNDHIDYLHDGHLHHNKHGDH
                     YDEHVLEVNETNPADCNAAHCCGDHVHGEVCGHEAVPHGDHIDYIVNGRLHHQHGDHC
                     DDHGPVEIVK"
     gene            13731..14600
                     /locus_tag="PXF40_001580"
     CDS             13731..14600
                     /locus_tag="PXF40_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HDL5802909.1"
                     /translation="MTLAIVYSRASIGVEAPLVTIEVHISNGQPKLTIVGLPEATVKE
                     AGDRVRSALLNANFIYPPQRITINLAPADLPKEGGRFDLPIAIGILAASGQIDSDLLT
                     QFEFLGELALTGHLRGVHGTIPAVISADKAKRQMILAKQNANEASLVSNATTYFAGSL
                     LEVVNMLNKRDKLPICQHISQHSAEIRPLVSRDLTDIIGQQHAKRALMIAAAGQHNLL
                     FLGPPGTGKTMLASRLADLLPEMTDEEAIETASVTSLVQNELNFQNWKQRPFRSPHHS
                     ASMVALVGGGCEN"
     gene            14692..16503
                     /locus_tag="PXF40_001581"
     CDS             14692..16503
                     /locus_tag="PXF40_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802910.1"
                     /translation="MFYLNNDNFKREPYRGYCPSHLEKLFTKPHLDIRGNGYYYPDNE
                     YVVAWYESDFIFKSRKAQAHAKVKLVNLTCPKYTGKNSAEYLSVLYISVPLNYLHYFT
                     IGSIWKGGVAKEQFALEEFYITVEAENQDGKRENLSIVSFGESEENGLEKPFDYTIYT
                     IPTEYHNYGDDLNRLLSISYQNQKFIIHPLHIFMMHYGYSTDIKRILATYPLDEVRER
                     LFIDKVVENFDVERYVVLPKYFVKKDAIFLYHFKYDEETTGTRVKKLVSQFRLNIHNQ
                     THPIEIDFWHTQKVELKIRGVRLGNAVLCAEIIGLNQPEGEDITLVLSQSKREKSGNK
                     TEEQNNEVNNVPITRVYTREPELDELPLTDNSPDNRTVEYNKRQFELLGRQRQIRALK
                     KAREESNQKMKALTPDEIDSLGVGESDGRNGKVGLAFCFLDDTPVGKSSKLYKLWQHA
                     KAVAEWNHGEAHWYTPNLGFRNDDELLPVSLETNKCFDYPEIAIIIRLQIYGETFFLI
                     DFSMKQRDISIRGLGYKPDPNEDFLYESDMSKSELSELLSAVHHHEHLPKEYIEKKNK
                     EKTKLTTFNHSEAESSNWAYNAVQKLTSRAITKPTYF"
     gene            16512..19292
                     /locus_tag="PXF40_001582"
     CDS             16512..19292
                     /locus_tag="PXF40_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HDL5802911.1"
                     /translation="MNAEQRVIVTPTFWGKFFGKIKSVELQQNKVIVTDKKNNITEHD
                     LGKTFDFPAIQKSFFGTKLFFKDDSTEVVLSKLAKKQTDSLLLEIEKVVASNIKVKVK
                     EGFQHFANLAENQYLRDSDIPTLNDRVRLSVLSYGDNKEHFQKYFDESLVKKIQYISS
                     LFPVNAINAQTIRREYEQHVLNHRKHFFDVIESNPLTEQQRLSVIRNNDINMVLAAAG
                     TGKTSVMVAKALDLIDSGACKSEDILILAYNRDAATELSERLQERAREANLDLENSPS
                     ISTFHALGRRIIKECGKSVHLSKFAEDPMKLDRWFNKWLEDYIKEDPDNLAKFIQLAY
                     QPIDPFQFKTKDEYDRYVNDNDYRTLQGERVRGYQELLIANWLFSHSVEYEYEPRYVS
                     KRRIEIGFDYKPDFSLGDGVYLEHFGIDRQGRTRADINAQEYNANIQRKRELHAEHNT
                     TLLETYHYNWVENTLYKRLEQLMNEQFIPLKPKSQQEILDALNESGIFKENKNRYLKC
                     LQAIRTERLDYQQILKRLTDAKIVYAKEYATLLMRIHDAYVKELRSANEIDFDDMILL
                     ATQLVKTGEFKPKWKHILVDEFQDISMARLELLKEIYTKGPRPIWTVVGDDWQSIYRF
                     SGGKLEVTTRFNDMVGSHTLSKLEKTYRYNNSIADTAGQFIMQNPEQYQKNVVTHTKV
                     ADSCVHLYDSHVVKDEKSEANISLKASAILKLIRQKAPEATVAILARYRYLLEDAKSV
                     IKDKNVKFWTFHGSKGLEADYCILLGFFQGKVGFPNQNKEEAVVEALLPMLDSFPHSE
                     ERRLFYVALTRAKKESYLIADANAPSEFINELLSPKYKIDIVSKRFQERYRTIFKCNE
                     CSTGYFVMKQGKFGQFYSCTSGEVCRSSPRICEKCGRPMKLREGKFGQFWGCSGYGIK
                     GDQCTNTRKYFM"
     gene            19314..>20031
                     /locus_tag="PXF40_001583"
     CDS             19314..>20031
                     /locus_tag="PXF40_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5802912.1"
                     /translation="MDLFESKKQLIELIKKYDSDKEIYSSSSYNESQLRTDFLDPFFG
                     LLGWDITNSKNKLTSEREVIVEEPLKEKVSENVKKPDYTFRFNSQRKFFVEAKKPSVK
                     IKTDPLPAHQVRRYGFTAKLSISVLSNFEYLAIYDCSEIVDVQQDALYARVRLYHYTE
                     YVKFFDEIMNLLGRESVYSGHFDNEWREISQKIENSKQTVDELFFEQINKWRHVLGSE
                     LLKINPCISNNELNDAVQDYI"
BASE COUNT         6069 a         4011 c         4239 g         5712 t
ORIGIN      
        1 agtcatatca atgaatctcc cttgtctttc cgcaaaaaat ctgtataatt tgaccgcttg
       61 ttttctcttt tgaaacaagt tcgttaccct cacctcgaac gagggtttat tttttactat
      121 caacatttag aggaaaggtt atggtaacca ttcgtttaac tcgtggcgga gctaaaaaac
      181 gcccatttta ccaaatcgtg gtagtggaca gccgttcacc tcgtgatggt cgctttatcg
      241 agcgtatcgg tttcttcaac ccattagcag caggtcaagc tgagcgttta cgcttagatg
      301 tggctaaagt agatgcttgg gttgctaaag gtgctgattt atcagaccgt gttgcttctt
      361 tagtaaaaga agctcgcaaa gcagcttaat ttttaagcca aaattaaata agtaggtgag
      421 tatgagcgaa caaaagatcg aagttgtcgg aaaattaggt tcaacctatg gtatccgtgg
      481 ttggttgcgt ctctattcat cgacagaaca aactgagagc attttcgact accagccgtg
      541 gtttttaaaa attaaaggtc agtggcagca ggtcgaatta gaaagctggc gttatcatag
      601 caatgatttg attgttaaat tgaaaggcac tgaagaccgt gaagccgcac agttattaac
      661 caacgctgaa attggcgtgg atttgtctgt gtttcctgaa ttggaagagg gagattacta
      721 ttggcacgat ttgatcggct gttcggtagt aaacttagag ggctacacaa tgggaacagt
      781 tgccgaaatg atggaaacag gttcaaatga tgtgcttgtg gtgcgtaata acggcaaaga
      841 tgctttcggt aaacaagaac gattaattcc gtttttgtat gaacaagtag ttaaaagagt
      901 agatctcgcc accaaaacca ttacggtgga gtgggacgct ggtttctaac ctcaggtatg
      961 cggtgagctt tggaaaacat ttaaggcgtt aaaatgtgga ttggtattat ttcactgttt
     1021 cctgaaatgt ttaaagcaat taccgatttc ggggtgacag gacgtgcagt taaacaaaat
     1081 ctactgcaag ttgaatgttg gaatcctcgt gattttacat tcgataaaca taaaactgta
     1141 gatgatcgcc cttatggcgg tggtccggga atgttgatga tggtgcaacc tttgcgtgat
     1201 gcgattcacg cagcgaaaaa ggcggcatta gcagtagaag gcggtgaagc taaagtgatt
     1261 tatctttcgc cgcaaggacg taaactcgat caaaacggtg tgcaaacact ggcttcaaat
     1321 cagaaactga ttttaatttg tggacgatat gaaggcgtgg acgagcgatt gattcaaaca
     1381 gaagttgatg aagaatggtc aatcggtgat tacgttctca caggggggga attacctgca
     1441 atgacattaa ttgatgcagt tgcaaggttt gttcccgggg tattaggcaa acaggcttcc
     1501 gcgttagagg attctttcgc agagggatta ttagattgcc cacattatac ccgccctgaa
     1561 gtattagacg gtatgcctgt tccggaagtg ctgatgtctg gacaccatga acaaattcgt
     1621 aaatggcggt tggaacaatc gctggaacga acgtggttaa gacgccctga gctattggat
     1681 agcctagctc tgactgacga acagcgtgtg ttgttagcta aaattaaaaa acagcacaaa
     1741 atcagttaat tctaggatta tagaaggttt ttaaaatgag taacatcatc aaacaacttg
     1801 aacaagaaca gttaaaacaa gacttaccta gcttccgtcc gggtgacaca ttagaagtta
     1861 aggtatgggt agtagaaggt agtaaaaaac gtttgcaagc gttcgaaggc gtggttattg
     1921 caattcgtaa ccgtggcttg cactctgcat tcactctacg taaagtttca aatggcgtag
     1981 gcgttgagcg tgtattccaa actcactcac ctgtaattga cagcatttct gttaaacgta
     2041 aaggtgcggt acgtaaagct aaactttact acttacgtga gcgttctggt aaatctgcac
     2101 gtatcaaaga gcgtcttggc gactaattgc tacaaaacag tgaaatgcac aaaagccttg
     2161 aggaaactca aggcttttgc tttttgtact tacaagcagt tatttttcct caatgattta
     2221 caaatcttgc tttctttttt gttataatgt taacaagata acattaatga taggtgtcga
     2281 tatgaaacaa ttaagtatta gattgccaga cgatgaattt acttttatta aaacatttgc
     2341 ttctgctcat aaactgactt tacaaaattt tgtgatgtcc gcaatccaag ctaaagttgc
     2401 agaaatgtct gctaaaaata aaatatctga agaaagtaac attcatcaac ctctttctaa
     2461 agatgaaaaa ataatgctaa atgaggcaaa agtattttat tctgctcgtt cgcatttaaa
     2521 ggcagaaaat gtgattcttc cgagtgattt tatggagcaa attaaatcag gctgtggagc
     2581 agaaaaaatg gcagaaatga tgggatatac caaagaagat tgggagtcaa tgaagtaata
     2641 tggggcagat tacatttagt aatattttca caaaagtgat ttttgagaat gtgctttctg
     2701 cttcaactaa agagaaaata aaacaaatgc tttttcagtc tgtggttgca ttacctcctc
     2761 tccattcaga aagaaaaatg attttacagt tgaaaaagca aaaaattacc attttttatc
     2821 aagttattga ggaacaatct gtgcaaatcc tcgcttatca atttggtgga actgataaat
     2881 tgacaggtgt gtctaaagct cactttaaaa cactagatgc catttttcaa atgacggatg
     2941 aagagaaaga aggaaaattc taatgtaagc ggttattttt ccatattttt ttgcaaataa
     3001 cgtttctcaa attttgcttg atggcgttca agcacttccg tcatcgaaat gccatattta
     3061 tcggctaata caaaaagatt atccatcaca tcgcctaact cttcgattaa gttatctcgt
     3121 ttttgctgtt gtgaagcttc ggtttcgtcc ggtcgttcac gcccgatttc aatcgctctt
     3181 actgcacaag ccacttcgcc gatttcttct gctagataag tcacccgcat aaaagggctt
     3241 cgttcatacc aaccttgttg ttggtaaaac tggcgaaccc attgttgata ttgttcaatt
     3301 tgcattttat ttctgattca aaaagtaggg acgaaaaatt tttcgccctt ttataagaaa
     3361 atgtatcagg gcaaatgatg atttgcccct aggagtgtta ctctgcctca gagagaataa
     3421 tccagccact atccagccag tcgcaaatgg tgtctagcat tagctccagc tccgcttggt
     3481 cttgcacttt ggaggcaagt ttgttccacg aaatcgaatc tccattggcg atacgaatca
     3541 gtaatgccat ttctgcttcg tttaactcat caatccactc gccatttaca taaacccgtt
     3601 gagggttctc ggtgtagagg atttttacat ttgcatcttg ctgtaaccag ccgccggctt
     3661 cgagaatttc ttgcacttcg tcagggtaat attcattgtc agtttgcaat aattcataac
     3721 ggcgggagct tgccgcagtg gcaacactgt gagtgagtaa ctcatcgaac tgttcggaat
     3781 tttggagcaa gtcgattaac tgatgtttaa acattttcac cattttcgga tcaagcaacg
     3841 cattcggctg ttcattcggc gttaagcgga acggaagatg aaattccgat gaattaatgt
     3901 tgtcggcttg ttgttcgatg gttttgcaga gattttccag taaatcggtc gcatttggat
     3961 aacgtaaacc aaaagagaaa gttaaacctt gctcgctttc ggaaacacca tagtgagcca
     4021 ttcgagacgg cacataaagc acatcacccg ggttcattac ctcgtccatt accagttcgc
     4081 ccatatcatc aaaaatgcgg atcggttggt ttggtttgaa ttcggtgctt ggatcgcacc
     4141 atttgcctaa ttgccaacga cgttgcccat agccttgcac caagaacaca tcgtactcat
     4201 cataatgttt gccgacagtg ccgttgagcg gtgagcaaga aaccataatg tcatcacgtt
     4261 gccattgcgg gataaaacca aaagcctgcc aaagctcgcc tagctcagga gaccattgct
     4321 cgaggttttg caccattaca gaccattgta caggtaactc ttccaaatct tcctcaacaa
     4381 gcgggctgga tttaacagac catttctcgt tttcgcattg aatcaggcgt gcagtgactt
     4441 cttcctctaa tgccagttct aaaatatctt ccggctcaaa caatccgaca atttggggta
     4501 agccgttacg aattaatagc ggtcgttttt gccaatattc tcgcaaaaag gtttcagggc
     4561 tgatattttc aggtaagcag aatggaatgt tcataatggc tccttgctac gtgcttcttt
     4621 gagattactg atattctacc cgagaaatca ggaaaaacgg gaaatttttt atgatttagc
     4681 gacatcattc acattttgaa gaggaaataa tgaaaaaggc gaacattgtt cgcctttgaa
     4741 atttatttta aaccgagttt tttctcgaga tagtggatat tggtgccacc tttgcggaat
     4801 tctttatccg caagaatttg agtatgtaaa ggaatattgg ttttaatgcc ttccacaatg
     4861 gtttcggaaa gggcattttc catccggcga atcgcaatat cacgattttc agcaaaggta
     4921 atcaatttac caatcattga atcgtaatgt ggcggcacgc tatagcctga gtaaatatgt
     4981 gaatcccaac gcacacctaa accacccgga acgtgtaaac gggtaatttt acccggcgat
     5041 ggcaagaagg tgtttggatc ttctgcgttg atacggcact caatggcgtg acctttcact
     5101 ttaatatcat cttgtgtgat cgaaagtggt aagccggctg ccacacgcag ttgctctttt
     5161 accaagtcca caccggtaat catttcggtt acagggtgtt ctacctgtaa gcgggtgttc
     5221 atttcaatga agtaaaactc gccgttttca tataagaact caaaagtacc tgcaccacgg
     5281 tagccaattt cacggcaggc attggcacaa cgctccccaa taaattgacg caattcaggt
     5341 gtaataccct gagcaggtgc ttcttccacc actttttggt ggcgacgttg cattgaacag
     5401 tcacgctctg ctaaataaac cgcattaccg tgagtatcgg caagtacttg gatttcaata
     5461 tggcgtggat tttctaaata tttctccata tacaccatat cgttattaaa tgccgctttc
     5521 gcttcggctt tcgtcattgc gatagattct tccaaatctt tctcgtgatg aaccacacgc
     5581 ataccacgac cgccaccacc acctgatgct ttgatgatca ccgggtagcc gatacgttta
     5641 gcgatttctt tatttttctt cggatcgtta ccaaccggac cgtcagaacc cggtacgcaa
     5701 ggcacgccgg cttttttcat tgcattgata gcagagactt tatcgcccat taagcgaatc
     5761 acatcagccg ttggaccaat aaagataaag cctgatttct caacttgttc ggcaaagttt
     5821 gcgttttcag ataagaaacc gtagcccgga tgaatagcat cggcattcgt tacttcggca
     5881 gcggcaataa tcatcgggat atttaaatag ctttttaccg atggagcagg accgatacaa
     5941 atggtttcat cggctaattt aacgtgtttt aattcacggt cggcagttga atgcactgca
     6001 accgttttaa tgcccaattc tttacaagca cgcaaaatac gcagggcaat ttcaccacgg
     6061 tttgcgataa caactttttc taacataggg aaattccttg tgttctagaa aatgtagggc
     6121 gtgttgcaca cgcccgttgg ataatttaag gaagagctta ttcaatgatg aataattttt
     6181 ggtcgaattc taccggttcg ccatcattaa ctaagatttc ttttaccaca ccggctttgt
     6241 ctgactcgat acggttcatc attttcattg cttctacaat acataacgta tcaccgattt
     6301 tcacggtttg acccacttca acgaacggtt ttgcatctgg gcttgggcta cggtagaaag
     6361 tccccaccat tggtgaaagc actgcgtggc cactcgtttc tgcggctttt ggtgcttcag
     6421 ccggagctgc aacaggtact gtcgaagcta cttgaggtgc cgctggtgca acaacaggag
     6481 ctgctgcata ttgaactgca gctggtgcaa cagctggagc agcacggcta atacgcaccg
     6541 taccttcttc ttcagacact tctaactcgg taatgccaga ttcttcaact aattcaataa
     6601 gttttttgat tttgcgaata tccataataa gattccgtat gtgattaaat aaaataaaaa
     6661 agagaactcc acatttgggg tataaattca aatgtagagt taaaaaatgc tgggcgtaga
     6721 atacctgaat ttcgctaatt ttgcgaataa aatctgataa ttttggcgaa aatggacgat
     6781 tttagcattc atcgtaccag ttaggatttt tggaaaatgg tgactcacaa gcgattgaaa
     6841 attgccaatt ttttgtaaaa aacaaccgct tgtcagatta tttcaataaa tcttcatttt
     6901 tcttgtaatt ccacttgcta ccgggcttgt cgatatactg aaaatattcg ttggtaaaag
     6961 taccttgagc acaagttact ttgtctcggc ggaaatttac ttctttatca ccaatggcat
     7021 tatttagggt gtcaggaccg gtcataacaa acacgccacc ttcaatccga cgattctcaa
     7081 tattgctgat aatcagctca agggtgtctt ttagaatcca atttccagct tccgaagcca
     7141 agaaaaagtt ggtgtattta tcacggcgtt taattaacac ttcgctatca ttttcgccaa
     7201 taattttaga gagtgggtaa accaaatgcc cgtcaatatc aatataaatg ccaccttctc
     7261 ggagcaaagt aaaaattcgc caaaaatcag cttgtgccgc accatcggtt aatttgctat
     7321 aggcgttaaa ggtgcgttca tcggcgttgg ccttgatgta tgcctctcgt tcttctgtgc
     7381 taacgtagcg ataatcgtag ctcaatgaca ttaggcggtt aaacagataa ttcgcataca
     7441 ttggcaaggt gactttgtta gaataattcg tttgccaaat ggttttggta attttgctcg
     7501 gaatgcttga ttggattttt gccgggctat attccggaat ggtgaaacgt tttttcggaa
     7561 aaagtgcatg gaacggataa ctcaatattt tgacgatatt accgaataaa cggaagactc
     7621 cgttacagat cacaataaat tgttcatttt taacagccat tttattacct tatgctttta
     7681 agtgtgaaat tgcaaaatcc aacgcatatt catagccttt tgcccctaaa ccgcaaataa
     7741 cgccttttgc aatatcactt agataggagt gatggcgaaa aggttcacgg ctatgaacgt
     7801 tagacaaatg cacctcaaca aacggaatcg acacactcaa taacgcatca cgaattgcca
     7861 cgctggtgtg agtaaatgcc ccggggttaa taataataaa atcggtatgc tgaaaggctt
     7921 ggtgaatacg gttgataatc ggctcttcac cgttggcttg aaagctctcc agctcaacat
     7981 cttgggccgc agccaatttt tttaagtggt tttcaatatc cgccaaagtt tgcgaaccgt
     8041 aaatttgtgg ctcacgtttg cccaacatat ttaaattcgg gccgttaagg agaaggattt
     8101 ttttcatatt tacttattca acttgtaatt cataattaag ccattcacgg ttttctttcg
     8161 cccccaagcg ttgataaaaa cgaataccac cgtcattcca aggattttat tgtcttacaa
     8221 tgatgtgcct tcgcctcatt tttcaaggct tgcattaacg cctctcccac tttctgattc
     8281 cgagcagttt catcaacata aagctctttc atataaatag cggggcggtt ttgggcagtg
     8341 taaggaagaa aataataaac caatatgccg ataatgttag acgcattttc agccactaaa
     8401 cagtaaaaat cgggtgggct tttgcgaaag ccggattcca ttacaacttc aggagtaatc
     8461 gcaaaagaat cgatatagtg ctcaaacaca gccagttttt gcatcagagg gaacacttgg
     8521 tgggtatctt gttcgaccat tttgcggatt gtaaatgcca taaaattcct tacaagcggt
     8581 aaaaaaatcc ctcacttttg caaagcgagg gaggttttaa ttattcgtca atagaacgta
     8641 ataagtcgtt taagcccact ttgcttaagg ttttctcatc cacttttttc acaatcaccg
     8701 cacagtagag gttgtgtgaa ccatcttttg atggaagcga gcctgaaacc acaacagagc
     8761 ctgccggcac acggccgtaa tgtacttcgc cggtttcacg gtcgtaaatt ttggtagatt
     8821 gaccgataaa cacgcccatt gagatcacgc agttatcttc gacaatcacg ccttctacga
     8881 tttcagaacg tgcaccgata aagcagttgt cgccgatgat ggttgggttc gcttgtaatg
     8941 gctctaacac accaccgatg cccacgccac cagaaaggtg aacattttta ccgatttgcg
     9001 cacaagaacc cactgttacc caagtgtcca ccattgtgcc ttcgccaacg tatgcaccga
     9061 tgttcacgaa agatggcatt aacaccacgt ttttctcgat atgtgaacct ttacgcacca
     9121 ccgcacccgg cacggcacga atgccatctg ctttgaattg ctcttcggtg tagttgccgt
     9181 atttggttgg cactttgtcg tagaatttgg tttctgcacc gtcgatgatt tcattgtcgg
     9241 caatacggaa tgaaagtaat accgcttttt tcacccattg gtttactacc cactcgccat
     9301 cttttttctc ggcaacacgc agtgaaccgt tgtctaatcc tgcgatcacc tcttctactg
     9361 ctgctttggt ttcagcatca acggttttcg gagtaatttc cgcacggcgt tcaaatgccg
     9421 cttcaataat agcttgtaaa gacattgttg tgttccttca atatataaat taaaacagaa
     9481 aattcggctc actttttaac atagaaaggc gtttatttcc acaagaaaaa acatatcgca
     9541 gaaatttagt ttataattcc aagccactta tttgatacaa gcggtgattt ttgtggaaaa
     9601 ttttgcaaat ctgcttaccg gtaaaacgcg tgagcattta gtgccgttgc cgaacgctct
     9661 ttcggataaa cattaccttc agcctcaggt ggttgaggct tttttgacgt tgcagcatgc
     9721 tgcaaaacaa gccggcttta atttacagcc tgccagtact tttcgtgatt ttgaacgcca
     9781 aaaagggatt tggaatgcga agtttagggg tgagcgtaag gttcacgatg ataacggggt
     9841 tgcgattgat atggcggcgt tatcggatct tgaaaagtgc aaagcaatgt tgagatggtc
     9901 tgcggtgccg ggggcaagtc ggcatcattg gggaacggaa attgatattt ttgaccctga
     9961 tttattgccg gaaaatacgc ctttattgct tgagccgtgg gaatatttgg aaggtggcta
    10021 ttttgccgat ttaaccaagt ggttacacgt taatgcggaa acatttggct tttatttccc
    10081 gtttgacggt aaacattctc gagtgggctt tgagccgtgg cacattagct atcgcccgat
    10141 ttcaaatgaa tatgagcaac gctttaacga tgaaatctta aaagctgcgt ggcaagatga
    10201 agaagtggcg ggtaaggaat gcttacttga acattttgaa gaattactaa aatgatccaa
    10261 ttaattaacg aaacccaaca acacgacaaa ttccgccaaa tttgcgacaa atggcagctg
    10321 gttgaagata aatccagccc gttagcctta gtgctaacgg aggaacgatt ggaactacgc
    10381 aaattagacg aacccaagct cggggcgatt gcagtgaatt ttgtggacgg tacgatggca
    10441 catcggcgta aattcggtgg tgggcgaggt gaagccgttg cgaaagcggt cggcattaaa
    10501 ggggattatt tgccaactgt gattgatgcg acagccggtt tagggcgaga tgcttttgta
    10561 ttagcagcgg ttggttgtaa agtgctgtta gtggaacgca atccaattgt cgctgccttg
    10621 ttggaagatg gtttaaaccg agcttatcaa gatgtggaaa tcggcagttt tatgcaagaa
    10681 agaatgatct tagccgatgt tcgagacatt tctcagctag atccacaatc ccaaatggct
    10741 gaggtagtgt atttagatcc gatgtatccg cacaaacaaa aaagtgcgtt ggtgaaaaaa
    10801 gaaatgcggg tgtttcaaca tttagttggg gcagatttag attcggacag ctttttctta
    10861 ccggcaaaag gattggcaaa aaaacgtgtg gtagtgaagc gtccggacta tgccccgttt
    10921 ttagcggagc aaaagcctga tttttcacac accaccaaaa atcaccgttt tgatgtttat
    10981 ctttctcacc tgaaaaatga ttaaaggtgg gtcatgcgat aggcaagcgg ttatttttac
    11041 agtaaaattt acaaattatg ttatcgttta tttatattta aaaaggcggt tatcgtgcca
    11101 caacgtgatt atgtcgctcg ttccaacgag aaaaaaagta aaaaaaatca aaaagaaagt
    11161 aatgttaaaa agattttaat gcggattatc ggggtaattt tattcttcgg tattggttta
    11221 tggtttttga aatccagtgc acctgtacca acagttccgt cagcaccgca gcctgctaat
    11281 tcacagacta aaagcgaatt accaagtcga ccggaagaga cgtggagcta tattcgtgat
    11341 ttagaaaccc gtacggtaat taccgataat agccaaactt cacaagaacg tttggcacaa
    11401 ttaacggcgg aacaaaagca gcaaattgaa gaaagacgca aacaagaaga agcacgctta
    11461 gccgctgagc aagctcaaca aaagcctgcg accgatgtat ctgctacaga attggctccg
    11521 aaaacagagg aagttaagtc gttaacggaa gaagaattag cagcaaaaaa agcacaggag
    11581 caagctttag cacaaaagca agcggaagag aaacgcagac aagcagagct taaaaaacag
    11641 caggaagcga aaaaagagca gccggctaaa attgtagcaa gtgctgcaac actggcagat
    11701 aaagctgcaa atcaggcggg taaatttggg ttacagtgcg gtgcatttaa aaataaagcc
    11761 caagccgaaa atatgcaagc aagattggca atggcaggtt ttaacgcccg tatcgcaagc
    11821 agtgccgatt ggaaccgtgt ttttgtcggc ccgataggtg acagagcggc aacttccaga
    11881 gctcaatcca atgcacgcag tgtagcggaa tgtgtgattg tggcgatgta aaattgattg
    11941 aaatattgaa gagagctata ggctctcttt ttttatatcc caatcgcata tttcaaggct
    12001 tgctttttga tgggtgacac tttatcagcc aatactaaac cgacattgcg ggcaattttg
    12061 agcggtaata aatcggtctt aaacgcttta taaaacacgt ccatgcctgt ttgcatcagt
    12121 aaattatccg gtttacgttt ttgctcatag cgttgaagca cctgctcact tgcaaaattt
    12181 ttgccttttt tgaccgcttg ttcgatcacc tcaagcaagg ttttaacatc tttaaagcct
    12241 aaatttacac cttgtccggc aagcggatta atggtgtgag ccgcatcgcc gactaatacc
    12301 accccgtttt gcacatagtg ctgagcgtgc tggcgggtta gcgggaaagc ccctgaagcc
    12361 tgcacctgaa tgttgcctaa ttctgcgttg agccggcttg ggaaatgttg ctcaatcgca
    12421 actcccagct tttctgctgg aagcattttc agttcggcaa ttttttgtgg tgaatcgtac
    12481 caaacaacgc agccgtgatt gccggaaagc ggtaaaaagg ctcgagggcc ggttggatag
    12541 aattgttgcc aagtgccgct tggagcaggt ttttcggtgg taacggtggc gagtaaacag
    12601 tgttggcgat attgccaagc ggttaaacca atgcccgccc attggcgaac ctgtgaattt
    12661 gcaccgtctg cggcaatcag cagtggggca gcaaaggtgt tgccatcaac cgtcacttcc
    12721 caatactcgc ccgctttatt tgcaaaaatt tgctcaaatc cgaccgcttg taggcagttt
    12781 ggatattgct ttaattgctc ccataacgca atttgaataa cgttgttttc gaccatatcg
    12841 ccgagctttt ccaaacccaa atcagctgcc gaaaaaagag tgttgaatcc atcaatttcc
    12901 caggtttcga gctgggtata aggggtgctt ctcattgcaa caatttgctc ccacacgccc
    12961 aatttttcta acagttgaat cgagcccata ctaatggcgg aaattcgcaa atcgtagtct
    13021 gaatcaggat taaaggtcgg cagagggttt ttctccaaca aggctaaacg cagcccctgt
    13081 tttgctaagc ctagagctgt tgctgcccca atcataccgc caccgattac aatcatatct
    13141 aattcagttt tcattttttc ttccttttta gttaggcaaa atactgctaa aacgccttga
    13201 attgtagtgc atttcagatt aggatcaaac cgatttatct atttatctaa ggagcgtttt
    13261 atgtcttgca aaactcatgc aaaccacgag cacgaacacg gcgaaggctg tggtcatact
    13321 gctattaaac ataacgacca tatcgactat ttacacgatg ggcatttaca ccacaacaaa
    13381 cacggcgatc actatgacga acacgtttta gaagtgaatg aaaccaaccc ggcagactgt
    13441 aatgccgccc attgctgcgg cgaccacgtt catggtgagg tttgcggaca cgaagctgtg
    13501 ccgcacggcg atcatatcga ctacatcgtg aatgggcgtt tgcaccacca acacggcgac
    13561 cactgcgatg accacgggcc ggttgaaatt gtgaaataag atttttgatg ggaggtttta
    13621 gcctcccatt attatttttg cgatctcgct cgaaaaattg aacattcctg ctacccctct
    13681 tccgattttc cttttatgct ctcggtattg atttctaata ccgaaatgtg atgaccttag
    13741 cgattgttta cagccgagcc tccattggcg ttgaagcccc gttggtgacg attgaagtgc
    13801 atattagcaa cggacaacca aaattaacca ttgtcggctt gcccgaagcc acagtgaaag
    13861 aggctggtga tcgtgtgcgg agtgcgttgc tgaacgctaa ttttatctat ccgccacaac
    13921 ggatcacgat taatcttgct ccggcagatt tacccaaaga aggcggacgt tttgacttgc
    13981 cgattgcgat tggcattctg gcagcctcag ggcaaattga ttctgattta ttaacgcagt
    14041 tcgagttttt gggcgagttg gcactgacag ggcatttgcg aggagtgcac ggcacgattc
    14101 cggcagtgat ttctgccgat aaagccaaac ggcagatgat cttagccaag caaaatgcga
    14161 atgaggcatc gcttgtttcc aatgccacca cctactttgc cggctcgttg ttggaggtgg
    14221 taaatatgct caacaaacgg gataaactgc cgatttgtca gcacatttcg caacattctg
    14281 ccgaaattcg accgcttgtc agccgagatc ttactgatat tatcgggcaa caacacgcca
    14341 agcgagcctt aatgattgcc gctgccgggc aacataattt gctgtttctc ggaccaccgg
    14401 gaacgggtaa aacaatgttg gcaagccggc tggcggattt actgccggaa atgaccgatg
    14461 aggaggcgat tgaaaccgcc tcggtgacca gccttgtgca aaatgagctg aattttcaga
    14521 actggaaaca acgcccgttt cgttcgcccc atcacagtgc atcaatggtg gcattagtgg
    14581 gaggtggctg tgaaaactag aaataaatgt caaaaacaag aaataaatgt cacaaatctt
    14641 tctctaattt cgctataatt cgatcatcaa aactttaagg ggaaatccgt tatgttctac
    14701 ctcaataacg acaatttcaa acgagaacct tatcgtggat attgtccgag tcaccttgaa
    14761 aagcttttta ctaaaccaca ccttgatatt agaggtaacg gttattatta ccctgacaat
    14821 gaatatgttg tagcttggta tgaatcggac ttcattttca aatcaagaaa agctcaagca
    14881 catgcaaaag taaagcttgt taatttaact tgccccaaat acactggcaa aaacagtgct
    14941 gaatatttaa gcgttttgta tatctccgtt ccccttaatt atctacatta tttcactatc
    15001 ggcagtatct ggaaaggcgg tgtcgccaaa gagcagtttg ctctcgaaga attttacatt
    15061 acggttgaag ctgaaaatca agatggtaaa cgagaaaacc tctcaatcgt ttcattcggt
    15121 gagagtgagg aaaacggttt agagaaacca tttgattaca caatctacac tatccccaca
    15181 gaatatcaca actacggtga tgacctaaac cgactacttt ccatctctta ccaaaatcaa
    15241 aaattcatta tccatccgct acatattttt atgatgcact acgggtactc tacggacatc
    15301 aagcgtatct tggcaacata cccacttgac gaggtaagag aacgcctatt tatagataag
    15361 gtcgttgaga attttgatgt agagcgttat gtcgttttac cgaaatactt tgtaaaaaaa
    15421 gatgcgattt tcctctatca cttcaaatat gacgaagaga ctacgggaac aagggtaaaa
    15481 aagcttgtaa gccagtttag gttaaatatt cacaatcaaa cacatccaat agaaatagat
    15541 ttttggcaca cgcaaaaggt tgaattgaaa atccgtggtg ttcgacttgg aaatgctgtg
    15601 ttatgcgcag aaattatcgg tcttaatcag cccgaaggcg aagatattac gctagtgcta
    15661 tctcaatcga aaagagaaaa atcgggtaat aaaaccgagg aacaaaataa cgaggtaaat
    15721 aacgttccta ttaccagagt ttatacacga gaacctgaat tggatgagtt accactcacc
    15781 gataactccc cagataatcg aacagtcgaa tacaacaagc gacaatttga actcttgggc
    15841 cgtcaacgcc aaatcagagc gctcaagaaa gcacgcgaag agagtaatca gaaaatgaaa
    15901 gccttgactc cagatgagat agactcactg ggtgtaggtg aatcagatgg ccgaaacggt
    15961 aaggttggac tcgctttctg tttccttgat gatacacctg ttggcaaaag ctccaaacta
    16021 tacaaattat ggcagcacgc gaaggctgtt gcggaatgga atcacggtga ggcgcactgg
    16081 tacacgccta atctcggttt tagaaatgac gatgaactcc ttcccgtttc cttagaaacc
    16141 aacaaatgtt tcgactaccc tgaaatcgcg ataattatcc gcctccaaat atacggagaa
    16201 acatttttcc tgattgattt ctcaatgaag caaagagata taagcattcg tggcttaggg
    16261 tataaacccg atccaaacga agattttctc tatgaaagtg atatgagcaa aagcgaatta
    16321 tccgaattat tgtccgcagt tcatcatcat gaacatctgc caaaagagta catagagaaa
    16381 aagaacaaag aaaaaaccaa actcactaca tttaaccata gcgaagccga aagtagtaac
    16441 tgggcttata acgcggtgca aaaattaact tcaagggcaa ttactaagcc gacatatttt
    16501 taattatttt tatgaatgca gaacaacgtg taattgttac tccgacattt tggggtaaat
    16561 tttttggaaa aattaaaagt gttgaacttc aacaaaacaa agttatcgta actgacaaaa
    16621 agaataatat aactgaacat gatttaggaa aaacttttga ctttccagct atccagaagt
    16681 ctttctttgg tactaaatta ttttttaaag acgatagcac agaagttgtt ttatcaaaac
    16741 ttgcgaaaaa acaaactgat agtctattac ttgaaatcga aaaagtagtt gcatctaata
    16801 ttaaagtgaa agtaaaagag ggttttcaac actttgcaaa tttagccgaa aatcaatatc
    16861 tcagagattc cgacattcct acattaaatg atcgtgtaag attgtcagtg ctttcctatg
    16921 gggataacaa agaacatttt caaaaatact ttgatgaaag tttggttaag aaaattcaat
    16981 atatctcttc actttttcct gtaaatgcca taaatgctca aacaattcga agagaatacg
    17041 agcaacatgt tttaaatcat cgcaagcatt tctttgatgt cattgaatct aatccgctta
    17101 ctgagcaaca aagattgtca gtcattcgga acaacgacat caatatggtt cttgctgccg
    17161 cggggacagg aaaaacgtct gtaatggtcg caaaagcatt ggacttaatt gattctggtg
    17221 cttgtaaaag cgaagatatt ttgattcttg catacaaccg cgatgcagca accgaactat
    17281 ccgaacgctt acaagaacgt gcacgagaag ccaatttaga tctggaaaat agccctagca
    17341 tctcgacttt ccatgcgctt ggccgaagaa ttattaaaga atgtggaaaa tcagtccact
    17401 tgtcaaaatt tgccgaagat ccgatgaaat tagatagatg gttcaacaaa tggctagagg
    17461 actacatcaa agaagatcct gataatcttg caaaattcat tcaacttgca taccaaccta
    17521 tcgatccatt ccaattcaaa acgaaagacg aatacgatag atatgtaaat gacaatgact
    17581 atcgaacctt acaaggcgaa cgcgttcgtg gttatcaaga gttattgatc gcgaactggc
    17641 tttttagcca cagcgtagaa tatgagtatg aaccaaggta tgtatcaaaa cgccgtatcg
    17701 agattggttt tgactacaaa cccgatttct ctttgggtga tggtgtttac cttgaacatt
    17761 tcggcattga ccgacaaggt agaactcgcg cagatattaa cgcgcaggaa tataatgcca
    17821 atatccaaag aaaacgtgag ttacacgccg aacataatac aacattactg gagacatacc
    17881 actacaactg ggtggaaaat acgttatata aacgactaga gcaattgatg aatgaacagt
    17941 tcattcctct gaagccaaaa tcacaacaag agattttaga tgcactcaat gaatcaggaa
    18001 tcttcaaaga aaacaaaaat cgctatttga agtgccttca agctattcgt acagagcgat
    18061 tagactatca acaaatctta aaacgtctaa ccgatgcgaa aattgtctat gctaaagaat
    18121 atgcgacatt gctcatgcgt attcatgatg cctacgttaa agaactacgt agcgcaaatg
    18181 aaatcgactt tgacgatatg attttgttgg ctactcaact ggtgaaaaca ggtgagttta
    18241 aacctaaatg gaaacatatt ttagtcgatg aatttcaaga tatttctatg gctcgattgg
    18301 agttattgaa agaaatttat actaaagggc ctcgaccgat ttggactgtt gttggagatg
    18361 actggcaatc aatctatcgt ttctctggcg gtaaactaga agttactacg cgatttaatg
    18421 atatggtcgg ctcacacacg ctaagtaaac tagaaaaaac ctaccgctat aacaatagta
    18481 ttgctgacac agcaggtcaa ttcattatgc aaaatcctga gcagtatcag aaaaatgttg
    18541 taacgcatac aaaggtcgct gattcttgtg ttcatttgta tgactctcat gtcgtaaagg
    18601 atgaaaaatc agaagccaat atcagtttaa aagcctcagc aatattaaaa ctgatacgtc
    18661 aaaaagcacc tgaagccact gtcgcaattt tggctagata ccgttacctt ttagaagatg
    18721 caaaaagtgt aatcaaagat aagaatgtta aattttggac gttccacggc tcaaaagggt
    18781 tggaagcaga ttactgcatt ttacttggtt tcttccaagg aaaagtcgga tttcccaacc
    18841 aaaataaaga agaagccgtt gtagaagcat tgcttcctat gctagacagt tttccacact
    18901 cagaagaacg taggttattt tatgtggcat taacgcgtgc gaaaaaagaa agttatttga
    18961 tcgcagatgc gaacgcgcca tcagaattta tcaatgaatt attatcaccg aaatacaaga
    19021 tagatattgt gtcaaaacga ttccaagaac gttatcggac aatctttaaa tgtaatgaat
    19081 gtagcactgg ctatttcgtg atgaaacaag gtaaatttgg tcagttctat tcttgtacat
    19141 caggggaagt atgccgctct tcgccacgga tttgtgaaaa atgtggccgt cctatgaagc
    19201 tgcgagaagg taaatttggt cagttttggg gatgctcagg atatggaatc aaaggcgatc
    19261 aatgtacgaa tactcgtaag tattttatgt aatatattat tttggaggat tttgtggatt
    19321 tatttgaatc aaaaaaacaa ttaatagagt taattaaaaa gtacgatagt gataaagaaa
    19381 tttattcttc atcctcatac aatgagtctc agttaagaac tgacttttta gaccctttct
    19441 ttggtttact tggatgggat ataactaact caaagaataa actcacatct gaaagagaag
    19501 tgattgttga agaaccacta aaagaaaaag tttcagaaaa tgtaaaaaaa ccagattata
    19561 catttagatt caattctcaa agaaagtttt ttgttgaagc taaaaagcca agtgtcaaaa
    19621 tcaagactga ccctttacct gctcatcagg taagacgata tggcttcaca gcaaaattaa
    19681 gtatttctgt tttatctaat tttgaatatc ttgctatata tgattgttca gaaatagttg
    19741 atgtacaaca agatgctcta tacgcaaggg tacgattata tcactataca gaatatgtga
    19801 aattttttga tgaaattatg aatctcttag gtagagaaag tgtttattca ggtcattttg
    19861 ataatgaatg gcgtgaaatc tctcaaaaaa tagaaaactc taagcaaaca gtggatgaac
    19921 tattttttga acaaattaat aagtggcggc atgttctggg tagtgaatta cttaaaatta
    19981 acccttgtat ttcaaacaat gaattaaatg atgcagttca agactatatt a
//
LOCUS       DANMCL010000051        19897 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.051, whole genome shotgun sequence.
ACCESSION   DANMCL010000051 DANMCL010000000
VERSION     DANMCL010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19897
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.051"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            185..397
                     /locus_tag="PXF40_001584"
     CDS             185..397
                     /locus_tag="PXF40_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HDL5802913.1"
                     /translation="MSAITGTVKWFNATKGFGFITPDQGGKDVFVHFSAIEANGGYRT
                     LEDGAKVQFEIQDSERGASAVNVKTI"
     gene            complement(457..1611)
                     /locus_tag="PXF40_001585"
     CDS             complement(457..1611)
                     /locus_tag="PXF40_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HDL5802914.1"
                     /translation="MMKVSPFQWAAFNYFGFFCAYGVLLPFLPVWLKHHGYSTEMIGL
                     FAAVGYLFRFAGSMLASQRVKTVSQLIPTARSLTWLNIAAAAALLFSGDFIWLLFPVL
                     MLFQMFNSGAMPIADSIASIWQHQIGLDYGRARLFGSMAFVVGSLSAGYLIGLLGENS
                     VVWIIIGFLVFLGIGQLATPKVGFEEQGNKANTSSVTYRQLLKEPETLKMLIAVSLIS
                     ASHAAYYTYSTIHWSNASISTAMTSLFWGLAVVAEILFFLVSKRLFKSWKISHLMILA
                     AVFAVIRWAIMGSTTEIVLIIVMQMLHSITFGAAHIAMIRYISMQSAERVTKLQGLYF
                     GLASCAFMAVFTFIAGMVYQHSPSLTFWLMAIFTLPAIFIVPKRFEVQIN"
     gene            complement(1608..2426)
                     /locus_tag="PXF40_001586"
     CDS             complement(1608..2426)
                     /locus_tag="PXF40_001586"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HDL5802915.1"
                     /translation="MNEKKLAFIGTGNMAYAIIQGLLKSGYSAEQIIACNKSNLARRE
                     ELQAVGIATNFANREAVEQADVIVLAVKPQMMAQVCAEFADVDFSNKWVISVAAGISV
                     QRLETLLPSAKNIIRTMPNTPSLISEGMTGLFAKKSVNPTACQFAEQLMSAVGKCYWV
                     ETEEQINHIIAITGSSPAYFFRFMEAMQQSAVQMGFSEQDARTLVQSVALGAAKLVEA
                     NPTTPLSTLRENVTSKGGTTAKALEVFEQHDLAKTVDDAMWAAIHRAREMEQSL"
     gene            2503..3411
                     /gene="rdgC"
                     /locus_tag="PXF40_001587"
     CDS             2503..3411
                     /gene="rdgC"
                     /locus_tag="PXF40_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HDL5802916.1"
                     /translation="MVWFKNVMIYKLTGELALESNSLNELQQETRFTPCSQHDMSKFG
                     WATPLTGSDLLHFSQANQFLLISHKEDKLLPANVVKAETEQRIAELEEKEARKLKKTE
                     KQAVKDQVVSALLPRAFSKHQFTALWLDLDNQLVYVDAASSKRAEDTLALLRKTLGSL
                     PVVPISFTLPPAEVMTNWIAKGHTPSWLNLLEEAELKSFDTDSIIRCKRQDLETEEIA
                     RHLQAGKFITKLAIEWEGHFNCVLNEDATLSRLKFADEVREKNDDILKEDVAQRFDAD
                     FLLMTEELKLFTEKMIAEFGGIKSRI"
     gene            3432..4037
                     /locus_tag="PXF40_001588"
     CDS             3432..4037
                     /locus_tag="PXF40_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase family hydrolase"
                     /protein_id="HDL5802917.1"
                     /translation="MLDQTIIDQYDALIFDMDGTLIDTMPSHAKAWEKVGEVLGYPIN
                     PKPMYELSGSTTFVIAREIMQRSNIPEHYFEQVVQLKREFGIEMVLANATLLPAFEII
                     KANVGKKPMAIGTGSHRAMVELLDQKFNLRQYVSVIVDSDDVSNHKPAPETFLKCAEK
                     LGIAPHRCLVFEDADLGVQAALNGNMNVFDVRTNTITHSTR"
     gene            4053..4844
                     /locus_tag="PXF40_001589"
     CDS             4053..4844
                     /locus_tag="PXF40_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HDL5802918.1"
                     /translation="MKTEWIKHLIQQLTTLSKAIENYFTSGSFGVKFYPFLMHPCFRK
                     SCAFLIFIIAMVSSFSGLFYLVAEHITILFSERSLTTYFHHSTLELMIPVGTMIDEKI
                     SELSPLSVVMRSMFVLQAVVFFFIYAIGITHIAHNKLRVIGLLLSLCFAIGCSLVAGI
                     QPSSRGEFGIYNLGASITFLIGNLTLIIAGFDLYHPSMQFFKRFSIGAGVIGAICILI
                     TIFLPTLFSPLIERAGIYTIMLWEILAGFAIIKRLLKLPSFRQQG"
     gene            4848..5990
                     /gene="argE"
                     /locus_tag="PXF40_001590"
     CDS             4848..5990
                     /gene="argE"
                     /locus_tag="PXF40_001590"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HDL5802919.1"
                     /translation="MKQIPFIQRYAQLIELPTISSLVAEEDLSNRRLIELLATWLADF
                     GFKTEILAVEGSRNKYNLLATYGEGEGGLLLAGHTDTVPFDEGKWRFNPFQLTEKAGK
                     LYGLGTADMKGFFAFVVEVVSQLDLTQIKKPIRILATADEETTMLGARTFAQHSHIRP
                     DCAIIGEPTSLKPIRAHKGHIGESVRITGRSGHSSDPAKGINAIELMHQSIGYLMKMR
                     DELREKYHNPLFQVTHPTMNFGNIHGGDAINRICACCELQFDMRPLPNMAVQDLYAMV
                     NEHLKPMLEQYGDLIEIRHLHDGIPGYECEHSAQIVQVVEKLLGEKCDAVNYCTEAPF
                     IQQLCPTLVLGPGSIEQAHQPDEFLEMKYIEPTKELLTKLIYHFCG"
     gene            complement(6137..6424)
                     /locus_tag="PXF40_001591"
     CDS             complement(6137..6424)
                     /locus_tag="PXF40_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5802920.1"
                     /translation="MPKSWELSLTARSNVIEILQSVEDYTGHWLSAVSLWEQLQNKLD
                     LIAFMPTIGRRREDGTLETFCRNYRIVYEIHLEKVYIITIIHSRRLYPRPS"
     gene            complement(6417..6608)
                     /locus_tag="PXF40_001592"
     CDS             complement(6417..6608)
                     /locus_tag="PXF40_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802921.1"
                     /translation="MLFKEQGYDEFLAEQIKAGQEAIARGETFTKEQINNELNHLFAD
                     MQKRQQLRENENLFEVNYA"
     gene            complement(6898..7488)
                     /gene="yraP"
                     /locus_tag="PXF40_001593"
     CDS             complement(6898..7488)
                     /gene="yraP"
                     /locus_tag="PXF40_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HDL5802922.1"
                     /translation="MNKLANKLLKGSLLVLGFISLQGCITTAVVTSAAVATKVATDPR
                     TTGTQVDDEILEEKVAYNINKDEQIKQEARINVVAYNGKVLLIGQAPSMDVVENAKNL
                     AAGAEGVTEIYNEIRQGEKIGFGQITQDSWITTQVKSKLLVNSEVKATEVKVVTENGE
                     VFLMGKVSQNQADAAAEAARNVGGVTKVVKVFSYAQ"
     gene            complement(7498..8082)
                     /locus_tag="PXF40_001594"
     CDS             complement(7498..8082)
                     /locus_tag="PXF40_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HDL5802923.1"
                     /translation="MLNKIQDRFTESIQTQISASELLPAKLSEAANRIVACLLRGDKV
                     IVCGHGRSYGNAELLVSHLLHRYELARPSFAAVQLQLSGVLAGVVAQDNELEAVYKKQ
                     LQAVAKEGDLFIVFSPVGNEECILQAIHTAKNQHLDLDIIALTGSNNDHTLGLLDESD
                     IEISAPSTNQLRVIESHHFYVNLLCELIDHLLFS"
     gene            complement(8088..8459)
                     /locus_tag="PXF40_001595"
     CDS             complement(8088..8459)
                     /locus_tag="PXF40_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HDL5802924.1"
                     /translation="MELFNKLINKREQGSFYEQKARVFLEQQGLRFVAANQAFKGGEL
                     DPIMQDGQTVVFVEVRQRKSNRFGSAVESIDYRKQQKWQNAANMWLLKQNQSLETANC
                     RFDVVAFEGNQTPVWIPNFLG"
     gene            complement(8434..10155)
                     /locus_tag="PXF40_001596"
     CDS             complement(8434..10155)
                     /locus_tag="PXF40_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HDL5802925.1"
                     /translation="MATILNHTMKKALVPTAIALFISACTSVNPVTESIKNEAYSSSE
                     FYINKADQTKEAEDKISYQLLAVRKLIDENKEYEAQNTFSEILTAEMNEVQKLEYALV
                     SAQLAALQGKNEQATSQLKAIQDPLLSSAQRLRYIQTQARIAANQKDVIGIVRARSQL
                     NNFYKMNRERQENNDIIWQTLRDANRGMLEKTVPEAGEMELAGWLALINIYNQNVTTP
                     AQMPQAINNWKAQYPSHSAVAVMPTELQGVSNFQQTQLNSVALLLPLSGDAKILGDII
                     KRGFNDAKADDSTAVQTFDTDSSDVNSLISQAKQQGANVIVGPLLKSRVDEMLLSPEI
                     QNVNILALNATENVRNIAQVCYYGLSPESEAQSGAEKIYQDGNSVAIVAAPQDDYGNR
                     SAEAFAKRWRQLTNSDADVRYYNQPLDAVAAIQNAGVSKAALYILGNAEQVLEIKQGI
                     DSSTLKDRLAIYTSSRSNSPNNGIDFYTSMEGVKFSEVPLLADQSSSEYKKAENLANS
                     DFSMMRLYAMGADAWSLATKFNEFRHIPGYKISGLTGELKAGQHCNIERSLSWMQYRN
                     GAIQQAY"
     gene            10229..11101
                     /gene="rsmI"
                     /locus_tag="PXF40_001597"
     CDS             10229..11101
                     /gene="rsmI"
                     /locus_tag="PXF40_001597"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HDL5802926.1"
                     /translation="MKNRQNSSGINPNYGILYIVATPIGNLGDITQRALDTLSSVDLV
                     AAEDTRHSGLLLSHYGIKKPFFALHDHNEQQKAVVLVEKLAKGENIALISDAGTPLIS
                     DPGFHLVRHCRQAGVKVVPIPGACAAVTALCASGIASDRFCFEGFLPAKTKSRCDKLT
                     ELENEPRTLIFYESTHRILDTLADMQTVFGEDRYVVMAREITKTWETIYGDQLGNLIE
                     WLNEDSNRIKGEIVLVVEGKPQSSEEAFSSQAIKLLTLLCQELPLKKAAAIVAETFGY
                     KKNALYQYGLEHFE"
     gene            complement(11346..12512)
                     /locus_tag="PXF40_001598"
     CDS             complement(11346..12512)
                     /locus_tag="PXF40_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5802927.1"
                     /translation="MTNLLLAIIYLSFISLGLPDAILGSAWPSMHQQLAVPLSYAGVV
                     SMIMSIGTITSSLMSDKLTYHLGTGKVMVISVALTALALWGFSISDAFWILCLWAIPY
                     GLGAGAVDAALNNYVAVHYASRHMSWLHCMWGVGASIGPHILGYALLQGRGWEAGYFT
                     ISMLQIGLTLMLFCSLPFWKLRKQITAEINHSAKPMSLKETLKIPGVKYGILAFFGYC
                     GVEQTAGLWASSYFVMVKDVGLEQAAAFGSIFFIGITVGRGVSGFLTLKFSNRQMIKL
                     GSALILVGIAILCLPLGKYVTLASLIIIGLGCAPIFPCLIHSTPAFFGEDKSQSVIGV
                     QMASAYIGVLLLPPIFGFIANAISIQLLPLYLLLMFAIMAYAYRNLVRETSPSP"
     gene            complement(12664..14178)
                     /gene="putP"
                     /locus_tag="PXF40_001599"
     CDS             complement(12664..14178)
                     /gene="putP"
                     /locus_tag="PXF40_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HDL5802928.1"
                     /translation="MFGLDPTTIMFVVYILGMIAIGFIAYRVTNNLSDYILGGRRLGS
                     FVTALSAGASDMSGWLLMGLPGAVYAGGLIEGWIAIGLTIGAYLNWKLVAGRLRSHTE
                     HSGDALTLPEYFHNRFGDKTRLIKILSAVIFLLFFAIYCASGVVAGARVFENLFGLPY
                     HQAIWYGAVATILYTFIGGFLAVSWTDTIQASLMVFALILTPFFVMYNLGGFDEMQAL
                     IDRAGEMAQKDYNDIFTGTSVLGIISLMAWGLGYFGQPHIVVRFMAAESVKSLENARR
                     ISMTWMIICLLGAIGIGYFGMAYFFGNPEQVGNISKNPEQIFIELAKLLFNPWVAGIL
                     LSAILAAVMSTLSAQLLICSSAITEDLYKGILRPQASDKELVWLSRLMVLAVAALAIY
                     IAQDPDSKVFGLVRNAWAGFGSAFGPVVLLSLFWKRMNGFGAIAGMLTGALIVHFWGD
                     ITLKLALPEIYSMIPGFIAATLMIIVVSLITPMPSKAVLDTFDRANKAYLAEVK"
     gene            complement(14272..15060)
                     /locus_tag="PXF40_001600"
     CDS             complement(14272..15060)
                     /locus_tag="PXF40_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HDL5802929.1"
                     /translation="MNAKKEKESSGNQSLIRGLTLLELLAKFPNGCPLAHLAELSGLN
                     KSTVHRLLQGLQQEGYVRPAPTAGSYRLTTKCLAIGQRALSSINILHIAAPHLEALNL
                     TLGETVNFAMRENDHAILINKLEATTGMMRTRAYIGQQMQLYCSGMGKLFLAYGSADY
                     IPQYWQTKSDIIQKLTVNTITTIDGMQTELETIRRQGFAMDNEENELGVSCIACPIFD
                     HQQKVHYAISVSLSTARLNQLGRENLLPAIQETAEKISAELGGR"
     gene            complement(15057..15635)
                     /locus_tag="PXF40_001601"
     CDS             complement(15057..15635)
                     /locus_tag="PXF40_001601"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HDL5802930.1"
                     /translation="MNQSSLTDLRSQLRQSMRLKRQSLTAGQQTQAAESIIPQALSLI
                     ESYQVSHIAFYLPFNGEISPIPLMEQLLQQGKKLYLPLLHPFTSGQLLFVNYNCKTIL
                     KFNRLGIQEPILDVRNILPLQELEMIFTPLVACDKAGNRLGMGGGFYDRTLAQAPHLI
                     SVGLAHECQQVEQLPIESWDMPLDHIILGAAK"
     gene            complement(15637..15828)
                     /gene="ssrS"
                     /locus_tag="PXF40_001602"
     ncRNA           complement(15637..15828)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="PXF40_001602"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(15933..16223)
                     /locus_tag="PXF40_001603"
     CDS             complement(15933..16223)
                     /locus_tag="PXF40_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HDL5802931.1"
                     /translation="MSANNIELQIFGQVLRLQCPVEQQEHLLASAQRLEERVVVLKEQ
                     SGIIQLEKVLAIVALNLNYELEQAQRQNAENKNVLVACIEQLDNSLGKFQSN"
     gene            16302..16859
                     /locus_tag="PXF40_001604"
     CDS             16302..16859
                     /locus_tag="PXF40_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HDL5802932.1"
                     /translation="MAITDSQQFKQLVSQLQIDDTPAEFHGFLCGLIAGGIQDESWKT
                     LTYQFTNDGHAFSIEPLNTLTDFYQQLSESFSEANTLFSLWLPQNEEDGFALADGISE
                     WTNSFLLGLGVAQPKLQQETDEVGEAIDDLDEIAKLGYSDDDNNEELLEAGEEVLEYL
                     RVLALFLHSHFALGVPKTEEKPPLH"
     gene            16957..18021
                     /gene="hemE"
                     /locus_tag="PXF40_001605"
     CDS             16957..18021
                     /gene="hemE"
                     /locus_tag="PXF40_001605"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HDL5802933.1"
                     /translation="MSELKNDRYLKALLREPVDMTPVWMMRQAGRYLPEYKATRAEAG
                     DFMSLCRNADLACEVTLQPLRRYELDAAILFSDILTVPDAMGLGLSFGAGEGPKFARP
                     VASLNDVNQLPIPDPEDELQYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTKIKKMLYAEPHILHKLLDKLADSVILYLNAQIKAGAQAVMVFDTWGGVLAHED
                     YKAFSLHYMHKIVDGLIRENEGRKVPVTLFTKGGGLWLEAIAETGCDAVGLDWTVDIA
                     DARRRIGDKVALQGNMDPSVLYASPERIEQEVKNILAGFGNGSGHVFNLGHGIHLDVP
                     VESPKVFVDAIHNYSKQYHK"
     gene            18168..18758
                     /locus_tag="PXF40_001606"
     CDS             18168..18758
                     /locus_tag="PXF40_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF416 family protein"
                     /protein_id="HDL5802934.1"
                     /translation="MRNPIHKRMERFEPWQNTTFMACLCERMYPNYQLFCEVTEQPEK
                     AKVFQNILNLVWEYLTIKGAKINFDNQLEKLEEIIPDVNEYAFFGVLPAQEACEALSE
                     LLHSIIAGSTLEQAIRISQISLGTVASYLEMQQDKELNEQELKNSEEIQEELDVQWQI
                     YRLLNECEKRDLDLIFELKDEIRSSGISNIGLNINQ"
     gene            18894..19166
                     /locus_tag="PXF40_001607"
     CDS             18894..19166
                     /locus_tag="PXF40_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HDL5802935.1"
                     /translation="MNKTELIDAIAAGANLTKKDAKAALEATLDAISASLKAGDAVQL
                     IGFGTFKVNERKARTGRNPKTGEEIKIAAAKVPAFVSGKALKDLVK"
     gene            complement(19255..19815)
                     /locus_tag="PXF40_001608"
     CDS             complement(19255..19815)
                     /locus_tag="PXF40_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802936.1"
                     /translation="MKKSFLSLLVLGTTMALAACDQAKEAAQSTTDKAVEVKEAVAEK
                     AAEVKSATEAKVEELKAAANDAAQATADKTEEAKKAVAEKATELKTTTEAKVEELKAA
                     ANDAAQATTDKTEEAKKAVAEKAAELKATTEAKVEELKAAASDATQATADKAEEAKKA
                     VAEKAAEVKVETETKVEEMKKAIESK"
BASE COUNT         5836 a         4410 c         4053 g         5598 t
ORIGIN      
        1 taaaagtata aaaatgattt gcttaaaaaa tgaataagtg gtgtaatggc tcaagctgtt
       61 cgtgcgttaa ttaaagttga atcttgttag ttattttcct caaggcaagt gattgataga
      121 tacgtctgta atatcccgtt tagctatctt ttatcacttt ttgtatttat ataaggaaaa
      181 ttttatgtca gcaattaccg gcacagtaaa atggttcaac gccaccaaag gttttggttt
      241 tatcacccct gatcaaggtg gcaaagatgt attcgtacac ttctctgcta tcgaagcaaa
      301 cggcggctac cgcacattag aagacggtgc taaagtacaa tttgaaatcc aagattcaga
      361 gcgtggagct tcagccgtaa acgtgaaaac aatctaattt cagcaaattc aatgaatttc
      421 gataaaaatg ccgacaactt gtcggcattt ttgctatcaa ttaatctgta cttcaaacct
      481 tttcggcaca ataaaaatgg caggtagggt aaaaattgcc atcaaccaaa atgtcaggct
      541 tggggaatgt tgatagacca ttccggcaat aaaggtaaat actgccataa aagcacagct
      601 tgccaagcca aaatagagac cttgtaattt cgtcacacgc tctgccgatt gcatcgaaat
      661 atagcgaatc atcgcaatat gagccgcccc gaaggtaata gaatgtagca tttgcattac
      721 aataatcagc acgatctctg tagtactacc cattattgcc caacgaatca ctgcaaaaac
      781 ggcagctaaa atcattaaat ggctgatttt ccacgattta aacaagcgtt tagagaccaa
      841 aaagaacaaa atttccgcca ccaccgccaa gccccaaaac aggctagtca ttgcggttga
      901 aatactggca tttgaccaat gaatggtgct gtaagtgtaa taagcggcgt gcgaggctga
      961 aattaacgac accgcgatca acatttttaa ggtttccggc tctttcaata attggcgata
     1021 agttacgctt gaagtattgg ctttattacc ttgttcttca aacccgactt tgggcgtagc
     1081 aagctgccct attcctaaaa aaaccaagaa accgatgata atccacacca ccgaattttc
     1141 accaagcaag ccgataagat agccggcaga aagtgagcct accacaaacg ccattgagcc
     1201 gaataacctt gctctgccgt aatccagccc gatctgatgt tgccaaattg aggcaatgct
     1261 atcggctatc ggcattgccc ccgaattgaa catttgaaac aacattaaca ccggaaaaag
     1321 tagccaaatg aaatcccctg aaaacagcaa cgccgccgca gccgcaatat tcagccaagt
     1381 taaactgcgg gcggtgggaa tgagttggct cacggttttt acccgttgtg aggcaagcat
     1441 actgccggca aagcggaaca aatagccaac ggcggcaaat aagccgatca tttcagtcga
     1501 atagccgtga tgtttaagcc acactggcaa aaacggcaac aacacgccat aggcacaaaa
     1561 aaagccaaag taattaaatg ccgcccattg gaacggggaa actttcatca taacgattgc
     1621 tccatttctc tggctcgatg aattgccgcc cacattgcat catcaacggt tttagcaaga
     1681 tcgtgctgct caaacacctc aagggctttc gccgttgtgc ctccctttga ggtcacattt
     1741 tcccgcaagg tcgaaagtgg cgtagtcggg ttcgcttcca ccaatttcgc cgcccccaat
     1801 gcgacagatt gtacaagcgt tcttgcgtcc tgctcggaaa agcccatttg caccgcactt
     1861 tgctgcattg cctccataaa acggaagaaa tacgccgggc ttgagccggt tatcgcaata
     1921 atgtggttga tttgctcctc ggtttccacc cagtaacatt taccaacggc tgacatcaac
     1981 tgttcggcaa attggcaagc ggtcggattt accgattttt ttgcaaataa tccggtcatt
     2041 ccttcgctga ttaaagacgg ggtgtttggc atcgtgcgaa tgatattttt cgcactcggc
     2101 aacagcgttt ccaagcgttg cacagaaata cctgctgcta ctgaaatcac ccatttgttg
     2161 gaaaaatcaa catcggcaaa ctcggcacac acttgtgcca tcatctgtgg ttttaccgcc
     2221 agcacgatca cgtcagcctg ctctaccgcc tcacgatttg caaaatttgt cgcaattccg
     2281 accgcttgta actcctctcg gcgagccaaa ttacttttat tgcacgcaat gatttgttcg
     2341 gcagaataac cgctttttaa taagccttga ataatcgcat acgccatatt tccggtgccg
     2401 ataaaggcaa gttttttctc gttcattcgc aaattctcta ctgtgttggg ttgaggtctg
     2461 ttaaaataac actattctac acccgataaa ggatatgcaa aaatggtttg gttcaaaaat
     2521 gtgatgatct ataaattaac cggcgagctg gcgttggaaa gcaatagcct taacgagtta
     2581 cagcaagaaa cccgctttac cccttgcagc cagcacgata tgagcaaatt cggctgggct
     2641 acgccactta ccggctcgga tttactgcat ttctcacaag cgaaccaatt tttgctgatt
     2701 tcacacaaag aagataaatt attacctgcc aatgtggtga aagccgaaac cgagcaacgc
     2761 attgcagaac tggaagaaaa agaggctcgt aagctgaaaa aaaccgaaaa acaagccgtg
     2821 aaagatcagg tcgtttctgc gttattgcct cgagcattca gcaaacatca attcaccgct
     2881 ctttggttgg atttagataa tcagttggtt tatgtggatg cagcctcgag caaacgggcg
     2941 gaagatacgc tggcgttact gcgaaaaaca cttggctcgt tgccggttgt gccgatttcc
     3001 tttaccctac cgccggcaga ggtaatgacg aattggatcg ccaaagggca tacgccaagt
     3061 tggttgaatt tgttggaaga ggcagaactg aaatctttcg ataccgacag cattattcgc
     3121 tgtaaacgcc aagatttaga gacggaagaa atcgcccggc acttgcaagc gggcaaattt
     3181 atcacaaaac ttgcgattga atgggaaggg catttcaatt gcgtgttaaa tgaagacgcc
     3241 acgctttcac gcctgaagtt tgccgatgaa gtgcgagaga aaaatgacga tattctcaaa
     3301 gaagatgtgg ctcaacgctt tgatgccgat ttcttattaa tgaccgaaga gctgaaactt
     3361 ttcaccgaaa aaatgattgc cgaatttggc ggaattaaat ccagaattta gaaaaaaatt
     3421 taaggaaagc aatgttagat caaaccatta tcgaccaata tgacgccttg atttttgata
     3481 tggacggcac attaattgac acgatgccaa gccacgccaa ggcgtgggaa aaggtgggcg
     3541 aagtgttagg ctacccaatc aatccaaagc caatgtacga actgagtggc tcaaccactt
     3601 ttgtgattgc ccgagaaata atgcaacgct ccaatatccc cgagcattat tttgagcaag
     3661 tggtacaact aaaacgggaa tttgggattg aaatggtgtt agccaatgcc actctgttgc
     3721 ctgcctttga gattattaaa gctaacgttg gcaaaaaacc aatggcaatc ggcacaggct
     3781 cacaccgtgc aatggtggaa ttattagacc aaaaatttaa cttacgtcaa tatgtttcgg
     3841 ttattgtaga ttctgatgat gtaagcaacc ataagccagc ccctgaaacc tttttaaaat
     3901 gtgcggaaaa acttggcatt gccccacacc gctgtttggt gtttgaagat gccgatttag
     3961 gcgtgcaagc cgccctcaac ggcaatatga acgtgtttga tgtacgtacg aatacgataa
     4021 ctcactcaac ccgttaaaaa tgataggttt atatgaaaac agaatggatt aaacatttaa
     4081 ttcaacaatt aaccacgctt tccaaagcca tcgaaaacta ctttaccagc ggttcatttg
     4141 gggtgaaatt ctaccctttt ctaatgcacc cttgttttcg taaaagctgt gcctttttga
     4201 tttttattat tgctatggtt tcaagtttta gcgggctatt ttatttggtg gcggaacaca
     4261 tcacgatttt atttagcgaa agatcgctca ccacttactt ccaccatagc acccttgaat
     4321 tgatgattcc agtcggcaca atgatagatg aaaaaatcag cgaattatca ccactttcgg
     4381 tggtaatgcg ttcaatgttt gtgctacaag cagtcgtttt tttctttatt tatgcaatcg
     4441 gcatcaccca cattgctcac aacaaattgc gggtcatcgg cttattgctt tcgctatgct
     4501 ttgcgattgg ctgctcacta gttgccggta ttcagccaag cagtcgtggc gaattcggca
     4561 tttacaattt aggggcaagc attacgtttt taatcggcaa tttaacgctg atcatcgcag
     4621 gcttcgatct ctaccaccct tcaatgcaat tttttaaacg ctttagcatt ggtgcgggcg
     4681 ttatcggggc aatctgtatt ttaatcacga ttttcctacc aaccctgttt agcccgttaa
     4741 ttgaacgagc aggtatttat accattatgc tgtgggaaat tttagccggt tttgccatca
     4801 ttaaacgcct gttgaaattg ccctcattca gacaacaagg ataaccaatg aaacagattc
     4861 cctttattca acgctatgct caactgattg agctaccgac catttccagc cttgttgccg
     4921 aagaagattt atcgaaccgc cgtttgattg aattgctcgc cacttggctg gcagatttcg
     4981 gctttaaaac cgagatttta gcggtagaag gcagccgtaa taaatacaat ttacttgcga
     5041 cctatggcga gggtgagggc ggcttattat tggcagggca taccgacacc gtgccgtttg
     5101 atgaaggaaa atggcgcttc aatccattcc aattaaccga aaaagcaggc aaactctacg
     5161 gcttaggcac ggcagatatg aaaggctttt tcgcctttgt ggtggaggtt gtgagccaac
     5221 tcgacctaac ccaaatcaaa aagccgattc gcattcttgc caccgctgat gaagaaacca
     5281 caatgctggg ggcaagaacc tttgctcagc acagccacat tcgccccgat tgtgcgatta
     5341 ttggcgagcc gacctcgctc aaaccgattc gagcccacaa agggcatatt ggcgaatcgg
     5401 ttcgcattac cggcagaagc ggacactcca gcgaccccgc caaaggcatt aatgcgattg
     5461 aattaatgca ccaatctatc ggttatttaa tgaaaatgcg tgatgaactg cgagagaaat
     5521 accacaatcc gctgttccaa gtcacccacc cgacaatgaa cttcggcaat attcacggcg
     5581 gcgatgccat taaccgcatt tgtgcctgtt gcgaattgca atttgatatg cgaccactac
     5641 cgaatatggc ggtgcaagat ttgtatgcaa tggtaaacga gcatttaaaa ccgatgctgg
     5701 aacaatatgg cgatttaatt gaaatccgcc atttacacga tggaattccg ggctacgaat
     5761 gcgaacactc ggcacaaatc gtgcaagtgg ttgaaaagct actgggcgaa aaatgcgatg
     5821 ccgtcaatta ctgcaccgaa gccccattca ttcaacaact ctgcccaacg ctggtactag
     5881 gccccggctc cattgaacaa gcccaccagc ccgatgagtt tttggaaatg aaatatatcg
     5941 aaccgacaaa agagttattg actaaattga tttatcattt ttgtggataa atcaacagaa
     6001 acaagcgctc attttcgcca tactttttgc aaaagaatcg gcaaaaatga ccgcttgata
     6061 tttagtattg agtgacctat aaacttccat acttcatcat tgatttaagg agattctgtt
     6121 agataggtat taatctctag ctaggtcttg gatacaaacg gcgagaatga attatagtaa
     6181 taatatatac tttttctagg tgtatctcat agacaatacg ataattgcgg cagaatgttt
     6241 ctaatgtgcc atcttctcta cgtcgcccta ttgtaggcat aaatgcaatg agatcgagtt
     6301 tattttgtaa ttgttcccaa agtgaaactg cgctcaacca atgccctgta taatcttcta
     6361 ccgactgtaa aatctcaatg acattagacc ttgcggtaag tgacagctcc caagatttag
     6421 gcataattaa cctcaaacaa attttcattt tctcgtaatt gctgacgttt ctgcatatcc
     6481 gcaaataaat gatttaattc gttattgatt tgttctttgg taaaggtttc tcctcgagct
     6541 attgcttctt gaccagcttt aatttgctct gcaagaaact catcatatcc ttgttctttg
     6601 aatagcatat tctgctcctt tgatttgtgt cttgattcca ctatgttcaa gacatagttt
     6661 aagtttaaat ctacgctcaa agcaatgaag agtcaaggga atccttatgt tgatagggtg
     6721 tgcatatttt tcgagtcaaa tgaattaaaa atcatcatta cgatcaccca ctcatagatt
     6781 ttatcttcct atctaaggtc atcttcttat atcaaacaag cggtctaaat ttgcaaaaaa
     6841 atgacaaatt tagaccgctt gtgagttaca aaaatataaa ctaattgagc ttatcaatta
     6901 ctgcgcataa ctaaatactt tcaccacttt ggttactcca cctacattgc gagcggcttc
     6961 ggcggcggca tcagcttggt tttggctgac tttgcccatt aaaaacactt cgccgttttc
     7021 ggtgacgact ttcacttcgg tggcttttac ctcgctattt actaacagtt tggatttcac
     7081 ttgggtggta atccagctgt cttgtgtaat ctgtccaaag ccgatttttt cgccttggcg
     7141 gatttcgttg taaatttccg tcacgccctc cgccccagca gcgaggtttt tcgcattttc
     7201 cactacgtcc atacttggtg cttgcccgat taataacact ttgccgttgt aagccaccac
     7261 gttaatgcgg gcttcttgtt tgatttgctc gtctttatta atgttgtaag cgactttttc
     7321 ttctaaaatt tcatcatcaa cttgcgtgcc ggtggtgcgt gggtctgtcg ccactttagt
     7381 tgcaaccgcc gcagaagtca ccaccgccgt ggtgatacaa ccttgtaaag agataaaacc
     7441 taatactaat aggctgccct ttaatagttt atttgctaat ttgttcataa tctctcctta
     7501 cgaaaatagt aaatggtcga taagttcaca taataaattc acataaaaat gatggctttc
     7561 aatcaccctc agttgattgg ttgaaggggc tgaaatttca atatcacttt catctaataa
     7621 gccgagtgtg tggtcgttat tactgcctgt taaagcaata atatctaaat ctaaatgttg
     7681 atttttcgcc gtatgaatag cttgcaatat acattcttca ttacccacag gcgaaaaaac
     7741 aatgaagaga tcaccctctt ttgcaaccgc ctgcaactgt tttttataaa cagcctctaa
     7801 ctcgttatct tgtgccacaa ctcctgccaa tacaccgctt aattgcagtt gtacggcagc
     7861 aaaactcggt cttgccagtt cataacggtg aagtaagtgg ctgaccaata attcggcatt
     7921 accgtaagag cgaccgtgtc cgcagacgat aactttatcg ccacgcaaca aacaggcaac
     7981 aatgcggttt gccgcttcac ttaatttagc cggcaatagc tcagaggcgg aaatttgggt
     8041 ttgaatactt tcggtaaatc tatcttggat tttatttaac attctttcta acctaaaaag
     8101 ttgggaatcc acacaggcgt ttggtttcct tcaaaagcaa ccacatcaaa acggcaattt
     8161 gcagtttcta aactttggtt ttgtttaagc aaccacatat tagcggcatt ttgccatttt
     8221 tgttgcttgc ggtaatcaat actctcaacg gctgaaccga agcggttgct tttacgctgg
     8281 cgaacttcta caaacacaac ggtttgtccg tcttgcataa tcggatccag ttcgccacct
     8341 ttaaatgctt ggttagcggc aacaaaacga agcccttgct gttctaaaaa cactcgggct
     8401 ttttgttcat aaaacgagcc ttgttcccgt ttattaataa gcttgttgaa tagctccatt
     8461 gcgatattgc atccaagata aactacgttc aatattacaa tgttgtccgg cttttaactc
     8521 accggttaaa cctgaaattt tgtagcccgg aatatggcgg aattcattga atttggttgc
     8581 caatgaccac gcatcagccc ccattgcgta taaacgcatc attgagaaat cgctattggc
     8641 taaattctcg gcttttttat attcactaga actttgatca gctaacagtg gcacttcact
     8701 aaattttacc ccttccattg aagtgtaaaa atcaatgccg ttatttggcg aattactgcg
     8761 agatgaggta tagatcgcta aacgatcttt taaggttgag ctatcaatac cttgtttaat
     8821 ttctaatact tgctcggcat tccccaaaat atataaagct gctttgctca cacctgcatt
     8881 ttgaatagcg gcaacggcat caagcggttg gttgtagtaa cgcacatcag catcgctatt
     8941 ggtaagctga cgccagcgtt tggcaaaggc ttctgccgag cggttgccgt agtcatcttg
     9001 aggggccgca acgatagcga cactattacc gtcttgataa attttttccg cccctgattg
     9061 tgcctcagat tcaggagata aaccgtagta acacacctga gcaatattac gcacattttc
     9121 agtggcattc agtgccaaaa tattcacgtt ttggatttct gggctaagta gcatttcatc
     9181 aacacgagat ttgagcaatg gcccgacaat cacatttgcc ccttgctgtt ttgcctgtga
     9241 aattaaggaa ttaacatcag atgaatcggt atcaaaagtt tgcactgcgg ttgagtcatc
     9301 agccttagca tcattaaaac cacgcttgat aatatcaccc aaaatttttg catcaccact
     9361 tagaggcaat agcaatgcga cactgtttaa ctgggtttgt tggaaattac tcaccccttg
     9421 taattccgtt ggcattacgg caaccgcact atggctcggg tattgggctt tccaattatt
     9481 aattgcttgt ggcatttgtg ccggtgtcgt cacattttga ttatagatat taattaatgc
     9541 caaccaacca gcaagctcca tctcacccgc ttcaggcaca gttttttcca gcattcctcg
     9601 atttgcatca cgcaaggttt gccaaataat atcgttattt tcttggcgtt cacggttcat
     9661 tttatagaaa ttgttaagtt gcgatcttgc acgcacaatg ccaatcacat ctttctgatt
     9721 ggcagcaata cgggcttggg tttgaatata acgcaaacgc tgtgccgaac ttaatagcgg
     9781 atcttgaatg gcttttaatt ggcttgttgc ttgctcgttt ttcccttgta aggcggcaag
     9841 ctgggcggaa accaaggcat actctaactt ttgcacctcg ttcatctctg cggtcagaat
     9901 ttcactaaag gtattttgag cctcatattc cttattttca tcaattaatt tgcgtacagc
     9961 taaaagttga tacgaaattt tatcttccgc ttctttggtt tgatctgctt tattaatata
    10021 gaattccgag cttgaatagg cttcattttt aatggattcg gtgacaggat ttaccgatgt
    10081 acaggcagaa atgaataatg caatcgccgt tggcaccaat gcctttttca ttgtatggtt
    10141 taaaatagtt gccattgtca gatcctcaat agaatataat gtgctaaatt taatgtgaaa
    10201 tcttacttat caaacgagct aaaagcaaat gaaaaacaga caaaattcat ctggaatcaa
    10261 cccaaattac ggaattttat atattgttgc cacgcctatc ggcaatttag gcgatattac
    10321 ccaacgggcg ttagacaccc tttcatctgt cgatttagtc gccgccgaag acactcgcca
    10381 cagcggttta ttgctgagcc actacggcat taaaaaaccg tttttcgcct tgcacgacca
    10441 taatgaacag cagaaagcgg tcgttttagt cgaaaaatta gcaaaagggg aaaacattgc
    10501 gttaatttcc gatgccggaa cgccactgat tagcgacccg ggctttcatc ttgtccgtca
    10561 ttgccgccaa gccggggtaa aagttgtgcc gatccccggg gcttgtgccg ctgttactgc
    10621 cttatgtgct tcaggcatag cttcagaccg tttttgtttt gaagggttct taccggcaaa
    10681 aacaaaatcc cgttgcgata aacttaccga gcttgaaaac gagcctcgca cactgatttt
    10741 ttatgaatcc acccaccgta ttttagacac tcttgccgat atgcagactg tttttggcga
    10801 agatcgctat gtggtaatgg cgcgtgaaat cacgaaaacg tgggaaacca tttatggaga
    10861 tcaactgggt aacttaattg aatggctaaa tgaggatagc aaccgaatta aaggcgaaat
    10921 tgttctggtg gttgaaggta aaccgcaaag tagtgaggaa gccttttcca gccaagcgat
    10981 caaattactg acattactct gccaagaact tccgcttaaa aaagccgctg ccattgtggc
    11041 agaaaccttc ggctataaga aaaatgccct gtatcaatat ggattggagc attttgagta
    11101 acagacaagc ggtcagattt tgtgagtttt ttgcagattg gcactcccct ctctctgaaa
    11161 aatgtttctg aacgaaacat ttcccggtct caatactcgc tacgctcgct ccttcggagc
    11221 cgttggcaaa gccaacgttc aaatgtaaac atttgtccca taaggggaga gagctaaatt
    11281 attcgcttgt cgacccctct ccactcgtgg gagagggaca gattcttctt cgttcagaag
    11341 aaaaatcagg gagaggggga agtttctcgc actaaattcc gataagcata tgccataatc
    11401 gcaaacatca acagcaagta aagcggtaat aattgaatgc tgatagcatt agcaataaag
    11461 ccgaaaatcg gtggcaataa caggacgccg atataggcac ttgccatttg cacgccgatc
    11521 accgattgag acttgtcctc gccgaaaaac gcaggggtcg aatgaattaa gcacgggaaa
    11581 atcggggcac aacctagccc gataataatt aaacttgcca gcgtaacata tttgcctaac
    11641 ggcaagcaca gtatcgcaat gccgactaag atcaaggctg aaccaagttt aatcatttgt
    11701 ctgttgctaa atttaagcgt caagaagcca cttacgcctc tgccaacggt aatgccgata
    11761 aagaaaatac tgccgaacgc agccgcttgt tctaagccga catctttaac cattacaaaa
    11821 tagctactcg cccacagtcc ggcggtttgt tctacgccac aatagccaaa aaaagctaaa
    11881 atgccatatt tcacgcccgg aatttttagc gtttctttta agctcatcgg ttttgccgaa
    11941 tggttgattt cagcggtaat ctgcttgcgt aatttccaaa aaggcagtga gcaaaacagc
    12001 attagcgtta gcccgatttg taacattgaa atggtgaaat agcctgcctc ccagcctcgc
    12061 ccttgcaata aggcgtagcc taaaatgtgc ggcccgatag aagctccaac gccccacata
    12121 caatgcagcc agctcatatg gcggcttgcg tagtgaactg ctacatagtt attcaacgcc
    12181 gcatcaaccg ctccagcccc taagccgtaa ggaattgccc ataaacataa gatccagaaa
    12241 gcatcactga ttgaaaagcc ccacaatgct aaagccgtta aggcaacgct gatgaccatt
    12301 actttgcctg tgccgagatg gtaggtcagt ttgtccgaca ttaagctaga ggtaatagtg
    12361 ccaatcgaca taatcatcga gaccacaccg gcataggaaa gcggaacagc aagctgttgg
    12421 tgcattgacg gccacgccga gcctaaaatt gcatcaggca acccaaggct gataaaagag
    12481 agataaataa tagcgagtag gaggttagtc atagcttaca atcggtcaca aaaagcatcg
    12541 ctttttgaac gttggctctg ccaacgggag cgaagctgtg aacaatcctt acaaggattg
    12601 tgaataattt ttgataaatt ttttgtaaaa aaatggctta aggagacctt aagccaaatt
    12661 ttattatttc acttctgcca aataggcctt attagcacgg tcaaaggtgt ctaatacggc
    12721 tttgcttggc attggcgtga taagtgatac cacaatgatc attagggtag cagcaataaa
    12781 gcccgggatc atcgagtaaa tttccggtaa ggcgagctta agtgtaatat cgccccaaaa
    12841 atgcacgatt aacgcaccgg tcagcattcc ggcaatcgcc ccaaaaccgt tcatacgttt
    12901 ccagaatagt gaaagcaata ccacaggccc aaatgccgag ccgaaacctg cccacgcatt
    12961 acgcactaag ccaaatactt tgctgtccgg gtcttgggca atataaatag ctaatgctgc
    13021 caccgcaagc accatcaagc ggcttaacca aaccagttct ttatcggagg cttgagggcg
    13081 taaaatgcct ttgtataaat cttcggtaat cgcacttgaa caaatcagta attgagcgga
    13141 aagggtactc attaccgcag caagaatggc agataataaa atgccggcta cccaagggtt
    13201 aaataacaat ttagctaatt caatgaaaat ttgttccgga tttttgctga tattgccgac
    13261 ttgctccggg ttgccaaaga aatatgccat accaaaataa ccaatgccta ttgcccccag
    13321 taagcagata atcatccaag tcatactgat acggcgtgca ttttcaagag acttcacact
    13381 ttctgccgcc ataaaacgca ccacaatatg cggttgtccg aaataaccca gcccccacgc
    13441 cattaagctg ataatgccta atacgctggt gccggtgaaa atgtcgttgt agtctttttg
    13501 tgccatctcg cctgcacggt cgattaaggc ttgcatttca tcaaaaccac ctaagttata
    13561 catcacaaaa aacggggtga gaatcagggc aaaaaccatt aatgaagctt gaatagtatc
    13621 cgtccaactt actgctaaga aaccaccaat aaaggtgtaa agaatggtag caacagcccc
    13681 ataccaaatt gcttggtggt aaggtaagcc aaataagttt tcaaataccc tcgcaccggc
    13741 cacaacgcct gatgcacagt aaattgcaaa aaagagtaaa aaaatgaccg ctgataaaat
    13801 cttaattaaa cgggttttat cgccaaaacg gttatgaaaa tattcgggta aggttaaggc
    13861 atcgccactg tgttctgtat gcgagcgtaa tctgcctgcg actaatttcc agtttagata
    13921 agcaccgata gttaaaccga ttgcgatcca gccttcgatc aaaccgcctg cataaacggc
    13981 tccgggtaat cccatcagca accagccgga catatctgat gcaccggcag aaagtgcggt
    14041 cacaaagcta cctaaacggc gaccgcctaa aatatagtct gaaaggttat tggtaacacg
    14101 ataggcaata aagccgatgg caatcattcc tagaatatag acaacaaaca taattgttgt
    14161 tggatcaaga ccaaacatta ttaatgaatc ctcaagattt cttattgtat aaagattaaa
    14221 gtgagtaaag ggtaaaagat tacctgaaat aatcaaaatg gcaacacaaa attaccgtcc
    14281 gcccagctca gctgaaattt tttctgctgt ttcttgaata gccggtagta gattttcccg
    14341 ccccagctga tttaaacgag cagttgaaag cgaaacagaa atcgcataat ggactttttg
    14401 ttggtgatca aaaatcgggc aagcaataca agaaacccct aattcatttt cttcgttatc
    14461 cattgcaaaa ccttgacggc gaatggtttc cagctcggtt tgcattccgt caatcgtggt
    14521 gatggtattg accgtcagtt tttgaatgat gtccgattta gtctgccaat attgtggaat
    14581 gtaatctgcc gaaccataag caagaaacag ttttcccatt cccgagcaat agagttgcat
    14641 ttgttgcccg atataggctc gggtacgcat cattccggtg gtagcttcta atttattgat
    14701 taaaatagcg tgatcgtttt cccgcatcgc aaaatttacc gtctcgccta aggttaaatt
    14761 tagggcttct aaatgtgggg cggcaatatg caaaatgtta atcgaactta aggctcgctg
    14821 cccgattgcc aaacatttgg tggttaaacg ataactgccc gcagtcggtg cagggcggac
    14881 gtagccctct tgttgtaagc cttgtagcag acggtgaacc gtgcttttgt tcagccccga
    14941 aagctcggct aaatgggcaa gcggacagcc gtttgggaat ttcgctaaca attccaatag
    15001 tgttaagcca cgaattaaac tttgatttcc actcgattcc ttttctttct ttgcattcat
    15061 ttggctgctc ccaaaataat atgatctaac ggcatatccc aactctcaat cggtaattgt
    15121 tcgacttgct gacattcgtg tgccaaaccg acactaatca gatgaggtgc ttgagcaagg
    15181 gttctatcat aaaagccacc tcccattccc agccgatttc cggctttatc acaagcaaca
    15241 agtggggtaa aaatcatctc taattcttgc aacggaagga tatttctaac atctaatatc
    15301 ggctcttgaa tccccaagcg gttaaatttt agaatagttt tgcaattgta atttacaaac
    15361 aataattgac cgcttgtaaa agggtgcaac agcggcagat acagcttttt gccctgttga
    15421 agtaattgtt ccattaaagg aataggagaa atttcaccgt taaaaggcaa ataaaaggca
    15481 atatgtgaga cttggtaaga ttcaatcaat gaaagagctt gaggaataat ggattcggct
    15541 gcttgagttt gctgaccggc agttaaactt tgccgtttaa gccgcattga ttgccgtaat
    15601 tggctacgaa gatcggttaa agatgattga ttcatataaa gacccgagat gccgctacca
    15661 gtaatggtcc ttgaaccagt cggttcaagg gagtcaaact taactgcttt taggcttctt
    15721 actcctaatt aaattagggt aagcttgctc accagcgtta gatgtccaac tcaaagtttc
    15781 aaattatcgg ctcagggacg taactcgtaa cgcacacccc aggcaagact tatagtaacg
    15841 gaatttgatg atttttccta gtatttaatc ccacaaaatg caaattctca atctttttgg
    15901 ctctattcct aatcaattcg attaaaaatt acctaattgg attgaaattt gccaagcgaa
    15961 ttatctaact gctcaataca agccaccaac acatttttat tttctgcatt ttggcgttgg
    16021 gcttgctcca gttcataatt taaattcagt gccacaatcg ctaacacttt ttcaagctga
    16081 ataatgccgg actgctcttt caataccacc acacgctctt ccaaacgctg tgctgaagcc
    16141 agtaaatgct cttgctgttc aacagggcat tgcaagcgta aaacctgccc aaaaatctgt
    16201 agttcgatat tatttgccga cataaatacg aaatcctcac ttaatcgcaa aatttttgct
    16261 atattatgcc attctttagc aaaatcacaa ataatcccat tatggctatc acagattccc
    16321 aacaatttaa acaactggta tcacaattac aaattgatga tacaccggca gagtttcacg
    16381 gttttttatg cggtttaatt gccggcggta ttcaagatga gtcttggaaa accctcacct
    16441 accaatttac caatgacgga cacgcatttt ccatcgagcc gttaaacact ttaaccgatt
    16501 tttatcagca attaagtgaa agcttttcag aagccaacac gctgtttagc ctttggttgc
    16561 cacaaaacga agaagatggt tttgccttag ctgatggtat ctccgaatgg acaaacagtt
    16621 tcttacttgg acttggcgtt gctcaaccta aattacaaca agaaaccgat gaggttggcg
    16681 aggcaatcga tgatttagat gaaatcgcca aactaggcta cagtgacgat gataataacg
    16741 aggaactact ggaggctggc gaagaagtgt tggaatatct gcgagtttta gccttattct
    16801 tgcacagcca ttttgcttta ggcgtgccga aaaccgaaga aaagccacca ttacactaat
    16861 gaataaatac aagcggttca atttcatctc tattttgcaa atatattatg cggggcgaaa
    16921 aatatttcgc ccctaccaaa atcaaaggaa aaaccaatgt cagaattaaa aaacgatcgc
    16981 tatttaaaag cgttattgcg tgaacctgtg gatatgaccc cggtctggat gatgcgtcaa
    17041 gccgggcgtt atttgccgga atataaagcc acccgagcag aagccggcga ttttatgtca
    17101 ctctgccgta acgctgattt agcgtgtgaa gtcaccttac aaccgctacg ccgttatgaa
    17161 ctcgatgcag ctatcctatt ttccgatatt ttaactgtgc ctgatgcaat gggattaggt
    17221 ttaagttttg gtgcaggtga aggccctaaa tttgcccgcc cggtggcaag cctcaatgat
    17281 gtcaatcagc taccgattcc tgatccggaa gacgagttgc aatatgtaat gaatgcggtg
    17341 cgtaccattc gccgagaatt gaaaggcgaa gtgccactaa ttggtttttc tggcagccct
    17401 tggacactcg ccacctatat ggtggaaggt ggttcaagca aagcatttac caaaatcaaa
    17461 aaaatgcttt acgctgagcc tcacattcta cacaaattgc tggacaagtt agctgacagt
    17521 gtcatcttat acttaaatgc ccaaatcaaa gccggtgctc aagcggtgat ggtattcgac
    17581 acttggggcg gtgtattggc tcacgaggat tacaaagcct tctcattaca ctatatgcac
    17641 aaaattgtgg acggcttaat tcgagaaaat gaaggacgta aagtgcctgt taccctattc
    17701 accaaaggcg gaggcttatg gttagaagcg attgcagaaa cgggctgcga tgccgttggg
    17761 ctagattgga cagtcgatat tgccgatgct cgccgccgta ttggcgacaa agttgcgttg
    17821 caaggcaata tggatccaag cgtgctgtat gcaagccctg aacgaatcga acaagaagta
    17881 aaaaacattc ttgccggctt cggcaacggc agcggacacg tctttaatct tggacacggc
    17941 attcatttag atgtgccggt ggaaagcccg aaagtgtttg ttgatgcgat tcacaactac
    18001 tcgaagcagt atcataaata atggataaaa tgccctctct ccttgtggga gagggacaga
    18061 tttttctttg ttcagaagaa aaatcaggga gaggggcaag cggtcatttt tatacagaat
    18121 tttgcaaaat cgttcccttc tctctgaaaa ataaagaagg aaatacaatg agaaacccga
    18181 ttcataaacg catggaacgt ttcgagcctt ggcaaaacac cacatttatg gcgtgcctat
    18241 gcgaaagaat gtaccccaac tatcagcttt tttgtgaagt aaccgaacag cctgaaaaag
    18301 ctaaggtatt ccaaaatatt ttaaatttag tctgggaata tttaaccata aaaggggcaa
    18361 aaattaattt cgataaccaa ctggaaaaat tagaagaaat cattcctgat gtgaacgaat
    18421 atgcgttttt tggtgtctta cctgcacagg aagcttgcga agccctttct gaacttcttc
    18481 acagtattat cgctggttca acccttgaac aagcaatccg catcagccaa atttcattag
    18541 gcacagttgc cagctatttg gaaatgcaac aagataaaga actgaacgag caagagctaa
    18601 agaattctga agaaattcaa gaagaactgg acgtacagtg gcaaatatac cgcttgctaa
    18661 acgaatgtga aaaacgtgat cttgatctca tttttgaact taaagatgaa atcagaagca
    18721 gcgggattag taatatcggg ttaaatatta accaatagca ttgatatttg caaaatcttg
    18781 cttaataata ctttgagaaa tcttaacttt gaattaagct atcgcaaggt ttcaataact
    18841 tctcagacgt tttacgtcat ttattaaaaa cacatatctt agaggataaa actatgaaca
    18901 aaactgagtt aatcgatgct atcgccgctg gtgcaaactt aaccaagaaa gatgctaaag
    18961 cagcattaga agcaactctt gatgcaatct ctgcaagctt aaaagcaggc gacgctgttc
    19021 aattaatcgg cttcggtact tttaaagtaa atgagcgtaa agcacgtact ggtcgtaacc
    19081 caaaaactgg tgaagagatc aaaattgcag cagctaaagt acctgcattc gtttcaggta
    19141 aagcattaaa agatttagta aaataattct ttaaagatat aaaaataaag cctggattat
    19201 aatccaggct ttatttttag cgtgtttcga tagctacaga gaaactaaaa agcactattt
    19261 gctttcaatc gcttttttca tttcttcaac ttttgtttct gtctcaactt tcacttctgc
    19321 tgccttctca gctactgcct ttttagcttc ttctgcttta tctgctgttg cttgagtcgc
    19381 atcacttgct gctgctttta gttcttccac tttagcttca gttgtggctt ttaactcagc
    19441 agctttctct gctactgcct tttttgcctc ttctgtttta tctgttgttg cttgagctgc
    19501 atcatttgct gctgctttta gttcttccac tttagcttca gttgtggttt ttaactcagt
    19561 ggctttctct gccactgcct tttttgcctc ttctgtttta tctgctgttg cttgagctgc
    19621 atcatttgct gccgctttca actcttcaac cttcgcttca gtagccgatt taacttctgc
    19681 agctttttca gctacagctt cttttacttc aaccgctttg tctgtagttg attgcgcggc
    19741 ttcttttgcc tgatcacaag cagcaagtgc catagttgta cctaacacta ataatgataa
    19801 aaatgatttt ttcataccga gttccttaaa taaactaaaa ataacgcact ttgtaataaa
    19861 gtgcgtttac ttaggcagaa aaattgatag aaagttc
//
LOCUS       DANMCL010000052        19820 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.052, whole genome shotgun sequence.
ACCESSION   DANMCL010000052 DANMCL010000000
VERSION     DANMCL010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19820
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.052"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1076)
                     /locus_tag="PXF40_001609"
     CDS             complement(<1..1076)
                     /locus_tag="PXF40_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HDL5802937.1"
                     /translation="MMSFLSEVFSSFKPTKAGVISSEPNENTGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDINPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAQNSAFSEEWLRVQAKHFKDIGKPEGLFIDDRVTNTAWSGRIRSTKMVIYRYVDKS
                     NDSNENLIIEQLNNACSRINGALTTAGLQLQRLDGEQIRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLP"
     gene            complement(1076..1474)
                     /locus_tag="PXF40_001610"
     CDS             complement(1076..1474)
                     /locus_tag="PXF40_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5802938.1"
                     /translation="MKHLFCIMISALLITGCTTSTEELLPTNGSTMRDIWDKGASNND
                     LHLYRSQQGRTLDPVDYIPNSEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            complement(1487..2941)
                     /locus_tag="PXF40_001611"
     CDS             complement(1487..2941)
                     /locus_tag="PXF40_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5802939.1"
                     /translation="MKANKALFVILGIVFILVGGIVYALFGRSESVPQPTQQEILDIS
                     IKDLTPEQVRTMGIQGDTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRI
                     NDAVNNETRKLQEQIADLKMQLFDMATLVNNKPTTQESTPQVEAQPNTVPNKGFGTAG
                     DKLPIGGATMSNVDTSGMYWVEPSDQISLDASGKPVSGNTVATKFGFPKDFNGGQSAG
                     NNEKKGLPFFPETDTVTSSQGTAGNARGKNQMTSVYTIPSNSTFLDSVAMTGLIGRIP
                     IDNRVSDAYPFKVLIGRENLIANGIELPDVDGAIVSGTATGDWTLSCVRGSVKSMTFV
                     FNDGRIVSTSNKGNGEEIGWLSDSSGIPCVPGERKTNAPEYLGTNFFLAAASAAAQGF
                     SQSQTTTVVDGSSVVGAVTGDQGKFILGQAIGGGLKESADWFRKRFAENFDAVYVPPG
                     HRVSIHIEKEIEIDYNAQGRKVKYGSKSTNSQLD"
     gene            complement(2953..3837)
                     /locus_tag="PXF40_001612"
     CDS             complement(2953..3837)
                     /locus_tag="PXF40_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03749 family integrating conjugative element
                     protein"
                     /protein_id="HDL5802940.1"
                     /translation="MKRLPILLVSLLIGFSGSSLADVLMKWERKPLPVALQVEKERII
                     FVDKNVKVGYPAELDGKLRIQSTGGAVYLKALETFPSTRIEFRDVTTGEIFLFDLTAA
                     SKVANPEEAIRVVFDGTVEKQSFSSNRDDESSDLPIANSRPQLPVPAALTRYAAQSLY
                     APLRTVEPLDGVRRVAHRLPKKITKLLPAYSIEATPLISWQLDEYVVTAIRLQNKGNT
                     QITLDPRELQGQFYAATFQHNWLGGYGENEDTTTLYLVTEGYANNALIPETRPVKLVS
                     KKVKRTTKVETKPAQSAK"
     gene            complement(3837..4481)
                     /locus_tag="PXF40_001613"
     CDS             complement(3837..4481)
                     /locus_tag="PXF40_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03746 family integrating conjugative element
                     protein"
                     /protein_id="HDL5802941.1"
                     /translation="MSQLKSQLHEKDKHIKTTRIFAFLFFIIILVLAGVIYTFPSRLT
                     IYNPPDLRAGSQRAWWEIPKPTIYAFSYQIFQQMNRWMTNGEEDYEKNITTLKPFLTP
                     HCEAFLRQDYKDRLRNNELRSRTRMVYEITGRGYSEDKVTIFSEDSWAVNLDLSVDEH
                     FQGQPVKRVYIRFPISIVRMDVDSAQNPWGLGFNCYHSIPKLLEGVEPKTEEKK"
     gene            complement(4485..4850)
                     /locus_tag="PXF40_001614"
     CDS             complement(4485..4850)
                     /locus_tag="PXF40_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03750 family conjugal transfer protein"
                     /protein_id="HDL5802942.1"
                     /translation="MSEQDTTIPFLPTRLNREATVYGGMTVSEFGISAGLGFMLGLIV
                     GLFLWILTDFWLLIPAMAMLLCIATVLIGKGIVAAVKRGKPEAYLNRLVEKKMDDLFN
                     GHKFIKREGFWSIRRYRRK"
     gene            complement(4873..5262)
                     /locus_tag="PXF40_001615"
     CDS             complement(4873..5262)
                     /locus_tag="PXF40_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2976 domain-containing protein"
                     /protein_id="HDL5802943.1"
                     /translation="MNRIKSLTKHLHSRYLAVMLFFWGSLQNAFAAGPDASKIPDFQI
                     PGVDSNTKDPMEIIWIVLKGLVTLGAVILAAVAILTVVKALIGIYNEATSENGKKGWG
                     HFILALIIGFIVIFFCLWLVKLAVGLF"
     gene            complement(5277..5510)
                     /locus_tag="PXF40_001616"
     CDS             complement(5277..5510)
                     /locus_tag="PXF40_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03758 family integrating conjugative element
                     protein"
                     /protein_id="HDL5802944.1"
                     /translation="MSYSPANAFSVASGIDPFRLKIMIAIIFLSLLLLAVAWALNSGY
                     KGFSFRDKSPFSLLVLFLKGVALLACVTYFFIY"
     gene            complement(5510..5836)
                     /locus_tag="PXF40_001617"
     CDS             complement(5510..5836)
                     /locus_tag="PXF40_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RAQPRD family integrative conjugative element
                     protein"
                     /protein_id="HDL5802945.1"
                     /translation="MSISTSLRKGIVVLVTLSCLPALASTEQEQLAQAIKQLEAAKLS
                     LQRAEKVAKASPKTREYFNYSAIHSDIETVKKGIQQYINPSRALPRDPNVLRTLSDDY
                     SKLRGQ"
     gene            6023..6406
                     /locus_tag="PXF40_001618"
     CDS             6023..6406
                     /locus_tag="PXF40_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802946.1"
                     /translation="MRYQMRYLALFLVVFPYVAHSLPSAQKVGNICHAENAQYNYGGL
                     WELSLRGKLICNYWQFLGDDERKKIELQLDEYGEFPIWNTSEQISEQIIEDDEYPQYW
                     EVEDWEDSDWDTESENEDTEATTEE"
     gene            complement(6438..7133)
                     /locus_tag="PXF40_001619"
     CDS             complement(6438..7133)
                     /locus_tag="PXF40_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03747 family integrating conjugative element
                     membrane protein"
                     /protein_id="HDL5802947.1"
                     /translation="MSEETKARRKSGLINLIFGKINMSLAAIAVSLIFSIILEWIGIA
                     FWWPQEGHLHSQTMMLNEMQWLSDDFSQSLFAKSSTAFATSIIENVYNWLFVYTGVKE
                     WLTSPGNGSMEQWVHHYGRAYIESVIYVVITFIIRLIIIVFTSPLFLLTALSGLTEGL
                     SLRDIRKFGAGRESAYLYHHARRYIMPMMVTAWVLYLSIPFSIHPNIILVPAACLFGL
                     SICITAASFKKFL"
     gene            complement(7130..7483)
                     /locus_tag="PXF40_001620"
     CDS             complement(7130..7483)
                     /locus_tag="PXF40_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5802948.1"
                     /translation="MSSAKMREEKRTNLLDLPNKYRNFNGEFSASCGLDNAEELLIHS
                     QSYFIEWFEQGYSFHQFAEKFADQGLSLWSADEVSMRHSDKSKDIFAFYLAFDNNPSG
                     YILVQCQLDREDSLQ"
     gene            complement(7476..9677)
                     /gene="traD"
                     /locus_tag="PXF40_001621"
     CDS             complement(7476..9677)
                     /gene="traD"
                     /locus_tag="PXF40_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HDL5802949.1"
                     /translation="MSAKHTLEAWLRPPVEFFPAAVHASCAFVSAAAPWSLALHPSIG
                     YSIAAGFGALSFYRAKQGWQIVRYHRNLKRLPNYSMTSKQIPVSNKYLFVGKGFEWKP
                     IHTQRLHDCFSDNGSKYLEPSKLFKMAREYEKRHENWLTHLTSKDSRWNLVRPLPPVE
                     GIPAIHGIEPDEVDVVQSVSSRVGHTVVFGTTRVGKTRLAEVFVTQDIHRGKTADERE
                     VVVFFDPKGDADMLKRMYAEAKRAGREDEFYVFHLGYPEISARYNPVGRFNRISEVAG
                     RISGQLSGAGNSAAFKEFAWRFVNIVARALVELGNRPNYVQISQFVQNIDSLFLDYAE
                     KFIRKTDPKIWENLATIAAGLDEKALPFGMKDRPLIFVINKYIAESAVFDPILQGLAS
                     AVRYDRTYFDKIVASLLPLLEKLTTGKISELLSPDYADILDERPIFDWESIIRKRGIV
                     YIGLDALSDATVAAAVGNSMFADLVSMAGHLYKFGTNDGLPGAFKEKSKPVKINLHCD
                     EFNELMGDEFIPLINKGGGAGIQVTAYTQTLSDIEARIGSKPKAGQTLGNFNTLYMLR
                     VKEPATAELLTKQLHEVTIKRSTVTSSTTDSSNPDDDKAFSSNTGQRISESTVPMLVP
                     ANITNLPKGQAFALMDGSKLWKIRMPLPAVDKDDMMHQSLRELTDYMRKNYHVVENWW
                     QPAFTEYTPSRDIAEAFEAMSEPQYKTQIDHQVDNFGIDEPYDIDEEENDE"
     gene            complement(9677..10183)
                     /locus_tag="PXF40_001622"
     CDS             complement(9677..10183)
                     /locus_tag="PXF40_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5802950.1"
                     /translation="MQNKVKVLLFSLYVSHFSWADLTVIADFGGESAVRFYESLQPEH
                     DENAPNYPNSISASVSEADILPIVSHKLSPGTIKEKPFDLTGMQAIFLIGADNTSAQW
                     LQQNREKLITLNATGLVVNVQTLSELNQLRDIVPELRILPTPGDDLAERIGIAHYPVL
                     ITESGVSQ"
     gene            complement(10186..10956)
                     /locus_tag="PXF40_001623"
     CDS             complement(10186..10956)
                     /locus_tag="PXF40_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HDL5802951.1"
                     /translation="MDITRVLVIVAVFLSNISISQAKPFNGFGSEIDSYIRMAAQRYQ
                     VSEAMLRGFVKMEDGWYGNISPTGATGVGQFTMGTWNWLSETERGKQLGMKLITAKNR
                     GSYADPRRDKYTNTLATALLARWHIEQFQLRNIPITDENLYMAHNIGLDGLHRAMMGK
                     ATKEDILNMRRNGMKSWMTVRDFLNYQKGRFLAHKQEANFMTVSKQGHIHTGVAAFVY
                     PTSQMGKSVKWVEPDNKMIWVEPKNAMVWVEPQNTLQR"
     gene            complement(10935..11708)
                     /locus_tag="PXF40_001624"
     CDS             complement(10935..11708)
                     /locus_tag="PXF40_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03759 family integrating conjugative element
                     protein"
                     /protein_id="HDL5802952.1"
                     /translation="MREISMKFNLCRKAIPLAVLPLLLSFALPTLAQNMQTETVSSSQ
                     STLQKQSQHQQSQLSDSLKQAKEWGLTVEEWSRYTELMKGERGMWSPNLDPLTALGIE
                     ARTAEEREKYARMLAKKYYERVSKELDFDKVYRQEFEKLYPNELPFEVEPHISQSVGR
                     VVYFTRFDNCDSCKSDLGKILSYANNQTPLDIYIVGQNISDNDIRKWAADNNIDPIKV
                     SKRLITLNHDKGYWLRYSLGKMPAAYQIKQDGEWTSLVY"
     gene            complement(11708..12337)
                     /locus_tag="PXF40_001625"
     CDS             complement(11708..12337)
                     /locus_tag="PXF40_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802953.1"
                     /translation="MKTKISLMTVFMLGLSGCVHQQDTAQNSDEITPMPDSLLTPQMQ
                     QLPPQDRIVSKDIYQEQTTSNTEVVRDGRYTLISIAPEEGQKYLLEQVVSVKVSNPKN
                     RFTANVQQGLRSTLTNTGLDLCYPPIGEQGNAVQTLFTRPLPKVHYQFGPMKLYEALQ
                     MIAGPAYELTLNDISRTICFKARESSFQNPHKPAVAVTTTTIKTEVIEE"
     gene            complement(12496..12756)
                     /locus_tag="PXF40_001626"
     CDS             complement(12496..12756)
                     /locus_tag="PXF40_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802954.1"
                     /translation="MTFELGRVCTTRAVAECFNQNALVELLNRYCYGDWGNLCEEDKL
                     ANQEAMKYGGRIVARYDVDDESLYIITEADRSCTTILFSYEY"
     gene            complement(12869..13231)
                     /locus_tag="PXF40_001627"
     CDS             complement(12869..13231)
                     /locus_tag="PXF40_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802955.1"
                     /translation="MEDSFFDFDDISCYLGQWEAILEEYSDIVSIEDFWLVAKEFETV
                     PHFGNLYQELVISRLIQRFCTELDIEQDSDLVEFDYYINAIDTHFYINRQRICDIDDW
                     NEMLDKIRKEMTPAKLAA"
     gene            complement(13311..13718)
                     /locus_tag="PXF40_001628"
     CDS             complement(13311..13718)
                     /locus_tag="PXF40_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5802956.1"
                     /translation="MNRQGIYINGKQVFDSKGKEINSVQIINSTVQTVVGINKGYISM
                     AAGNNVLIVDGQTIALEPSPTINIEVFGNVTNLNAGSENVRVTGDAKSVSTVSGDVTV
                     DGNVTSNVKTVSADIHCKSILGKINTVSGDIYR"
     gene            complement(13744..14424)
                     /locus_tag="PXF40_001629"
     CDS             complement(13744..14424)
                     /locus_tag="PXF40_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802957.1"
                     /translation="MNSLQQFVKTLSPTVLNGRHFDGIVGDVVFVQNGYGKWLDQGFT
                     IIGFDKSIEEKDWIYLDWDCYWFGKNPAQVIPEKSWAQRSWLARAYSISLERFNSLGL
                     EREYNIVSDWDNPIYGTDIQLIEHSKEFFRWTEADDRGIFLVHNEMAFHFFKKEIKAS
                     SEPEYYQPIETFWKDATVVLNIEDLDMLERVGLEQTNTPALAKLTTFVQAARNEISNG
                     NIVFYRAF"
     gene            complement(14530..14961)
                     /locus_tag="PXF40_001630"
     CDS             complement(14530..14961)
                     /locus_tag="PXF40_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5802958.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEHKKGNPFYACRVAAL
                     VGESDSPEYRYFDMNVVGKETETLIKKCQKAVSEEKKVLVSFVMADLWFDTFTYSSDS
                     KYHKKGDTGVSLKGRLIRIKMIKIDGEIVYQEKPKADEQSE"
     gene            15581..15718
                     /locus_tag="PXF40_001631"
     CDS             15581..15718
                     /locus_tag="PXF40_001631"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802959.1"
                     /translation="MTLQSRFRQLQQTNVAGIIHLMFSWHSHKVEFPLRMLGDILAGV
                     D"
     gene            complement(15779..17830)
                     /locus_tag="PXF40_001632"
     CDS             complement(15779..17830)
                     /locus_tag="PXF40_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HDL5802960.1"
                     /translation="MKLFICEKPSQARDLAGVLGATSKGEGLLATADKSIIVTWGFGH
                     LVEQYQPEDYDEAWKRWAFETLPIIPAQWKMTPKKESKKQYSVVIGLIKKATSVVIAT
                     DADREGEMIARELLDLAGYRGQIQRCWLSALDDASIRKALQTLKSGKETEALYYAGMG
                     RSRSDWLIGMNFSRLFTLMAQAKGYSGKPLSVGRVQSPTLTLVVNRDREIANFVPKSH
                     YALAVQLTTTSGETFVAGLAVPEQYLDESGLCLDSRVIQQAEAQIKQTGLAKVVTVET
                     KREKKSPPLLYALSDLQGECNRLFGFGAQQVLDIAQSLYEEHKITTYPRTDCGYLPES
                     QFSDVPNVIRSLVASDSGLQTLLPKLNLRQKSRAWDDKKITAHHGIIPTIKKADLSKL
                     SEEEMKVYDLIRRRYLAQFLPHLEMDKTVATLQSSGHTLVARGNVIVAQGWRILFGKN
                     VDEETGNDDEKQGLPVLTKNQQCNVTHSEVRTLQTKPPAHYTEGTLLDAMKNAARFVT
                     DPRLKQRLRETEGLGTEATRAGLIQGLIDKGFLLKKKKSLVASAEAVALIDSLPDLLK
                     NPGLTALWEQALNQIAEGSMTLDAFMQKQEAFVKQLIGSCMQQGMSLGNIEIRKCSEC
                     GKPMRKINHAKGTFWGCTGYPDCQHKEADKKVKSASNKSAKKSSNLNVLDQLNKLRSQ
                     L"
     gene            complement(17990..18508)
                     /locus_tag="PXF40_001633"
     CDS             complement(17990..18508)
                     /locus_tag="PXF40_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5802961.1"
                     /translation="MRYIKYSLFLVSTMLISGCAELSAINDKVGDWAGQMNQTLYGSK
                     DGSVEQHNGRQVYTKTRNGKYVYQDSGTLQLKRNIDDVFLKVRREFGFRPTNADSDSR
                     KVYHTVQGTFYHVSGYFESDVDTDGVHLGENYLEVIIEKGSKNQVNVEWKATGSARWL
                     DSAKQRLLNTLK"
     gene            18985..19695
                     /locus_tag="PXF40_001634"
     CDS             18985..19695
                     /locus_tag="PXF40_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802962.1"
                     /translation="MWKKIRIDFTDTVKCQFCSRMITSGKAIVVQNELGNISFSGPSC
                     AQNKNGQNVVNPKEKIVDITKGCLLHEPTTNDKTDKQVDVEQDNFTSIHDDEVHNYLD
                     NNAVNAYLTLRFEKLSHLTSIIKSQKLNEIYHNYELTGQISQKDESYIRVIMYGEAYP
                     LYTYQNLQAVYAAEYWLQSFIQHNPENDLNFIQDTLNQLRRKLTLTEKQIMGINNWFK
                     NSDGKMVKLKTNAFVRGK"
BASE COUNT         5894 a         4054 c         3764 g         6108 t
ORIGIN      
        1 ggcaataggt caaataacgc attaatatta cgcccacgag taatctcgcc ggtcattaag
       61 cccacttctg gttgttttct taaattattg actacaacaa cttcgtgcgg ttggtcatca
      121 aaataccaat agttgccttc atttttcggt tgagaataaa ataaatcttc actgaaatcg
      181 ttaaacgcta attctggaag cccgtcattt gaggtttgtt tgccaaaaag atggtaacaa
      241 tcattgttgc ttaatccctc aaaattaata gatggattag gattaaacca acgcaataac
      301 cattggcgaa tttgttcacc atctagccgc tgtaactgta atccagccgt tgttagagcc
      361 ccattgattc gggaacaagc attattaagc tgctcaataa taagattttc attggaatca
      421 ttggacttat ctacatatcg ataaatcacc attttggtac tccgaatacg tccagaccaa
      481 gctgtatttg tcactctgtc atcaataaaa agcccttctg gtttaccaat atccttgaaa
      541 tgcttggctt gtactcgtaa ccattcttcg ctaaatgcac tattttgggc aataggcgag
      601 atataattcc gtagctgttc aatataaggc tgtaaatcat cgctatcttg gcaataaaat
      661 tgcacgacgt aaggatttat atccagctca tcaaagctat cttgtaaggc atctttgaca
      721 agattacgta tccgacttaa aaattcaata ctacggccag cagtaccaat cggcttaata
      781 tcaaatactg ccccaacact acgggcatca tcaaggagta tcacaccgtg ctcattcaaa
      841 tattctcccc aaggtagatg atcgataaag gagggctctt gtgagtataa ccgacggtga
      901 tgctgtgact gggtgagttt tccactgcgt tttaattgtt gaacctcgtt atttacctca
      961 ctcattttat tttgaatgat gtcagactca ccggtatttt catttggttc acttgatata
     1021 acccctgctt tagtcggttt gaaagaggaa aatacctcac ttaaaaaaga catgattaaa
     1081 gccctcttgt tctatcaccc ggctgagcat attgaactcg tccatagaaa ggtagtactg
     1141 tagaatatcc tggaatactg agaggctctc cggaacgagt ttgatgtggg tacacataca
     1201 taatcagatc cggattaggt aaacgaggga acaagttatt aatttcattt tctgccgtac
     1261 gggtataggc tcgttgctca ctattaggaa tataatcgac agggtcaagt gttcgccctt
     1321 gttgtgaacg gtataagtgt agatcgttat tactcgctcc tttatcccaa atatcccgca
     1381 tcgtactgcc gttagtaggt aataattctt ctgttgatgt tgtgcaacct gttatcaata
     1441 aggcacttat cattatgcaa aataaatgtt tcatcgtttg ttccttctaa tccagttgtg
     1501 aattcgttga ttttgagcca tatttcactt tacgaccttg ggcgttgtaa tcgatttcaa
     1561 tctctttctc gatatgaata gagacacgat gacccggtgg cacatataca gcatcaaagt
     1621 tttcagcaaa acgttttcta aaccagtcag cagattcttt taagccgcct ccgatagctt
     1681 gtcctaagat gaacttaccc tgatcgccgg taacagctcc aacaacacta cttccatcaa
     1741 caacagtggt tgtttgtgac tgtgagaatc cttgggcagc agcacttgca gcagccaaaa
     1801 agaaattcgt tcccaaatat tctggggcat tggttttccg ctctcctgga acacaaggga
     1861 tacccgaact atctgataac cagccaatct cttcgccatt ccctttatta gaggtactca
     1921 caatacgtcc atcattgaac acaaaagtca tactttttac actgcctcta acacaggata
     1981 gtgtccagtc gccagtagca gtacctgata caattgctcc gtctacatca ggtaattcaa
     2041 taccattagc aatgagattt tctcgaccaa taagtacttt gaacggataa gcatccgata
     2101 ctcgattatc aatcgggata cgtccgatga gtcccgtcat tgcaactgaa tcaaggaatg
     2161 ttgaattact tggtatggta tatactgatg tcatctggtt tttaccacgt gcgtttccag
     2221 ccgttccttg tgagcttgtc acagtatctg tttccgggaa aaacggcaga cctttctttt
     2281 cgttatttcc tgcagattgt cctccattaa aatctttcgg aaagccaaat ttagttgcta
     2341 ctgtattgcc tgacacaggt tttccacttg catccaaact aatctgatcg cttggttcta
     2401 cccaatacat tccactggta tccacgttgg acatagttgc accaccgata ggtaatttat
     2461 ctcctgctgt tccaaatcct ttattcggta ccgtattagg ctgagcctct acctgagggg
     2521 tagactcttg tgttgttggt ttgttattaa cgagagtcgc catatcaaat aattgcattt
     2581 tcaaatctgc aatctgctct tgcagttttc gggtttcatt atttaccgca tcattgatac
     2641 gaccattcac taaatcttct ttctgtttga gttggcgatt ttcatcaatt aactcatcca
     2701 tacgacgctc attggattta acggttgtca caagggtacg cagcgtatca atcggcgtat
     2761 caccttgaat acccattgtt ctgacttgtt caggtgttaa atctttaatg gaaatatcta
     2821 aaatttcctg ttgtgtcggt tgtggaactg actcactacg tccaaataag gcatagacaa
     2881 ttccaccgac taagataaat acaatgccca gtatgacaaa taaggcttta ttcgctttca
     2941 ttgcctttcc tcctacttcg ccgattgagc cggtttagtt tcaacttttg ttgttctttt
     3001 cactttttta ctgactagtt tgactggacg ggtttccgga attaatgcgt tattagcata
     3061 gccttcggtc actaaataca gggttgtggt atcttcattt tctccgtacc ccccaagcca
     3121 attatgctgg aaagtcgctg cataaaattg tccttgaagc tctcgagggt caagcgtaat
     3181 ttgagtgtta cccttatttt gcaaacgaat agcggtaact acatattcgt ctaactgcca
     3241 gctaattaaa ggtgttgctt ctattgaata agccggtagc agcttggtaa tttttttagg
     3301 tagacgatgt gccacacgac gcacaccatc taaaggttca actgtacgta gtggagcata
     3361 aagtgattgt gctgcataac gggtcaatgc ggcaggtact ggaagctgag gacggctatt
     3421 cgcaataggc agatcagagc tttcatcatc tctattgctt gaaaaagatt gtttttctac
     3481 cgtaccgtca aaaaccactc gaattgcctc ttcaggatta gcgactttcg aagctgctgt
     3541 taaatcaaat agaaaaattt caccggttgt aacatcacgg aattctatgc gagtggaggg
     3601 aaatgtttct aatgctttta aatagacggc tccaccggta gattgaattc gtagcttacc
     3661 gtccagttct gccggataac caaccttgac atttttatcg acaaaaataa ttcgttcttt
     3721 ttccacttgt aacgcaacag gaagtggttt tctttcccat ttcatcaata catcagccaa
     3781 gctactccca gagaagccta taagcaaaga gacgagcaaa attggtagac gtttcattat
     3841 tttttctcct ctgtttttgg ctcaacacct tctaagagtt ttggaatgga gtgatagcaa
     3901 ttaaacccta atccccaagg gttttgagca gaatcgacat ccattctcac aatactgata
     3961 ggaaaacgaa tataaactcg ttttaccggc tgtccttgga aatgttcatc cacacttaaa
     4021 tcaagattga cagcccaact atcttcactg aatatggtaa ctttatcttc actatatcct
     4081 ctaccggtaa tttcatacac catacgggtt cggctgcgta gttcattgtt acgcagacga
     4141 tctttataat cttgtcgtaa aaatgcttca cagtgtggtg ttaaaaatgg tttgagggtg
     4201 gtgatatttt tctcataatc ctcttcgcca tttgtcatcc accgattcat ttgctggaaa
     4261 atttgatagg agaatgcata aattgttggt ttaggaattt cccaccaagc tcgttggctc
     4321 ccagcacgca gatctggtgg gttgtatatc gtaaggcgac ttgggaaagt atagattacg
     4381 cctgccagta ccaaaataat aatgaaaaac aggaaggcaa aaattcgagt cgttttgata
     4441 tgtttatctt tttcgtgtaa ttggcttttt aactggctca tttgttattt ccttctatat
     4501 cggcgaatag accaaaaccc ttctcgtttt ataaacttat gaccgttaaa gaggtcatcc
     4561 attttctttt caactaatct atttaaataa gcctctggtt ttcctcgttt aaccgcagcg
     4621 acaatacctt ttccgattaa gacagttgcg atgcagagca acattgccat tgccggaata
     4681 agaagccaaa aatcagttaa tatccacaag aagagaccaa caatcagacc taacataaat
     4741 cctaatccgg cagatatgcc gaactcacta actgtcatcc caccgtaaac ggtagcttca
     4801 cgattaaggc gggtgggaag aaaaggaatg gttgtatctt gttctgacat attggtctcc
     4861 tagacatttt aattagaaga gtccgactgc aagtttgact aaccacaagc agaagaaaat
     4921 cacaataaag ccgataatta aggcgagaat aaagtgtccc caaccttttt taccattttc
     4981 agatgtagct tcgttataga tgccaatcaa tgctttaaca actgtcaaaa tggctacggc
     5041 tgctaaaata acagctccga gagtgacaag acctttcaga acaatccaaa taatttccat
     5101 tggatctttg gtattactat ccacgcctgg aatttggaag tctgggattt tggaagcatc
     5161 aggaccggct gcaaatgcat tttggaggga accccagaag aagagcatta cagccaaata
     5221 acgactatgc agatgtttcg taagagattt aatgcggttc ataatagacc tcgaatctaa
     5281 tagataaaga aataagtaac acaagctaac agtgccactc ctttgagaaa taaaactaaa
     5341 agtgaaaaag gacttttatc tctaaatgaa aatcccttat aaccactatt caatgcccaa
     5401 gcgacggcta agagcagtaa tgaaagaaaa ataatggcga tcatgatttt caatctaaaa
     5461 gggtcgatac cgctggcaac agaaaacgca ttcgcagggg agtaagacat cactgccccc
     5521 gtaatttgct ataatcatca cttaatgtac gtagtacatt cggatcacga ggtaatgctc
     5581 ggcttggatt gatatattgt tgaattcctt ttttgacggt ttcaatatca ctgtgaatag
     5641 cagaatagtt aaagtattct cgtgttttag gcgaggcttt agctactttt tctgctcgtt
     5701 gaagtgataa ttttgccgct tccagttgct taattgcctg ggctaattgc tcttgttctg
     5761 ttgaagcaag tgctggcaag caagataagg taacaaggac aacaatacct ttccttaaag
     5821 atgttgaaat agacatagtg cacctctatt tttagtttta cttcaggtta agagtgccaa
     5881 aagcgatcct aaaatttaat ggaaaactct gttaccgttc agaagagaaa ttgcacaaaa
     5941 tagtaaatgg tgagaaagat attattctat gtttaagcta gtcaattaag tagtatcaac
     6001 accgaaatct tcacgcttta cgatgagata ccagatgaga tatctagcac tgttccttgt
     6061 agttttccca tatgttgccc attctcttcc ttcagcacag aaagtgggga atatttgcca
     6121 tgcagaaaat gctcaatata attacggagg tctttgggaa ttaagtttaa gaggaaagtt
     6181 aatctgtaat tattggcaat ttctaggcga tgatgagcga aaaaagatag agttacaatt
     6241 ggatgagtac ggggaatttc ctatttggaa tacctctgaa caaatttctg aacaaatcat
     6301 tgaagatgat gaatatccac aatattggga agtcgaagac tgggaggatt ctgattggga
     6361 tactgagtca gaaaatgaag atacagaggc aacaacagaa gaataagccc ccgcatattg
     6421 ctaagggctt atgaaattta caagaatttc ttgaaactcg ccgcagttat acagatggat
     6481 aaaccaaaca aacaggctgc tgggactaaa atgatgttcg gatgaattga aaacgggata
     6541 gataaataaa gcacccaagc tgtgaccatc attggcataa tataacgtct agcgtgatgg
     6601 tataggtagg ctgattcccg cccggcacca aattttcgta tatctcgtaa tgacagtcct
     6661 tcggttaaac cggaaagtgc agtcaataaa aagagtgggc tggtaaaaac aataataatg
     6721 aggcgaataa taaaggtgat caccacataa ataacagatt caatataggc tctgccgtag
     6781 tgatgtaccc actgttccat actaccatta cccggtgaag ttaaccactc cttaacaccc
     6841 gtataaacga ataaccagtt atacacgttt tcaataattg atgttgcaaa agcagtagaa
     6901 gacttggcaa acaggctttg agaaaagtca tccgatagcc attgcatctc attgagcatc
     6961 atcgtttggc tatgcaaatg cccttcttgc ggccaccaga aagcaatgcc tatccactct
     7021 aaaataatgc tgaatatgag agatactgca attgcagcaa gcgacatatt tatttttcca
     7081 aaaatcaggt tgattaaacc tgattttcgg cgagctttag tttcttcact cattgcaaac
     7141 tatcctctct atcgagctgg cactggacaa ggatatagcc ggaaggatta ttatcaaaag
     7201 caagataaaa agcgaaaata tctttggatt tatccgagtg acgcatagat acttcatcgg
     7261 cagaccataa cgaaagccct tgatctgcga atttttcggc aaactgatgg aaggaataac
     7321 cttgttcaaa ccattcaata aaataggatt gactatgaat caggagttct tctgcattat
     7381 ctaagccaca ggaagctgaa aactccccat taaaattacg gtatttattt ggtaaatcta
     7441 atagattggt tcttttttcc tctctcattt tggcactact catcattttc ctcttcatca
     7501 atatcgtaag gttcatctat gccgaaatta tctacttgat ggtctatctg tgttttatat
     7561 tgaggctccg acatcgcttc aaatgcttct gcaatgtctc gggacggcgt atattctgta
     7621 aatgccggtt gccaccaatt ttcaacaacg tgatagtttt tacgcatata atctgtcagc
     7681 tctcgtaaag attgatgcat catatcatct ttatcgacag caggtaacgg cattcgaatt
     7741 ttccataatt tactaccgtc cattaaagcg aatgcttgtc cttttggtaa attggtaatg
     7801 ttggccggaa ccaacatagg aacggtactt tcgctgatac gctgtccggt attggagcta
     7861 aacgccttat catcgtcagg attactggag tcagttgtac tggacgtgac cgtgctacgt
     7921 ttaatcgtca cttcgtgtaa ctgttttgtg agtaattctg ccgtagccgg ttcttttacc
     7981 ctcagcatat agagtgtatt gaagttacct aaggtttgtc ccgctttcgg tttactgccg
     8041 atacgagctt caatgtcgga gagtgtttgt gtataagcag ttacttgtat tccagcacca
     8101 ccgcctttgt tgatgagagg gataaattca tcacccatca attcattaaa ttcatcacaa
     8161 tgaagattaa ttttcactgg tttggatttt tctttgaatg ctcccggtaa tccgtcattt
     8221 gtcccaaatt tatataaatg acctgccatt gagactaagt cagcaaacat actgtttcct
     8281 acagcggccg caactgtcgc atcagagaga gcatctaaac caatataaac gattcctcgt
     8341 ttacgaataa tggattccca gtcaaaaatc ggacgttcat ccaaaatatc agcataatcc
     8401 ggggataaca gctcagaaat tttccctgtc gttaattttt ccaataacgg caacaatgag
     8461 gcaacaattt tatcgaaata ggtacggtca tagcgtacag cactggcaag tccttgtaga
     8521 attgggtcaa agactgcact ttcagcaatg tacttgttga tcacaaaaat cagcggacgg
     8581 tctttcattc cgaaaggaag tgctttttca tccagtccag cggcgatggt tgctaaattt
     8641 tcccaaattt ttggatcggt tttacgaatg aatttttccg cataatcaag gaataatgaa
     8701 tcaatatttt gtacaaactg ggaaatttga acatagtttg ggcgatttcc caattcaact
     8761 aatgcacgtg cgacgatatt gacaaatcgc caagcgaact ctttaaatgc cgccgagtta
     8821 cccgctccac ttagctgtcc tgaaatacgc ccagcgactt ccgaaatacg attaaagcgt
     8881 cctactgggt tataacgggc agaaatttcg ggataaccta gatggaaaac ataaaactca
     8941 tcttctcgcc ccgctcgttt tgcctccgca tacattcgtt tgagcatatc ggcatcgcct
     9001 ttcggatcaa agaagactac cacttcacgc tcatcagcag ttttacctcg gtggatatcc
     9061 tgggtaacaa agacctcagc taaacgagtt ttaccgacac gtgttgtacc gaatactacc
     9121 gtatgcccaa cccgagagct aacggattga acgacatcaa cctcatccgg ctcaattcca
     9181 tggatagcag gaataccctc aacaggtggc agaggtctaa ccagattcca ccggctatcc
     9241 tttgaggtaa gatgtgttag ccaattttcg tgtcgttttt catactcacg agccatttta
     9301 aatagcttag aaggctccag atattttgaa ccgttatccg aaaaacaatc gtgtaaccgt
     9361 tgagtgtgaa taggtttcca ttcaaatccc ttaccgacaa acagatactt attactgacc
     9421 ggaatttgct tgcttgtcat tgaataatta ggcaaacgtt tcaggttgcg atggtaacgc
     9481 acaatttgcc aaccttgttt tgcccgataa aagctcaatg ctccaaaacc agctgcaata
     9541 ctgtaaccga tacttggatg gagtgccaaa gaccaaggag ctgcagcact gacaaaggca
     9601 caagaagcgt gaaccgctgc cggaaaaaat tcaacaggag gtcgtaacca cgcctctaag
     9661 gtatgtttag cagacattat tgtgaaactc cgctttcagt gattaagaca gggtaatgtg
     9721 caataccaat tcgctctgca aggtcatctc cgggagttgg taatattctc agttccggta
     9781 caatgtctcg taattgatta agttcggaga gtgtttgtac attcactaca agccctgttg
     9841 cattcaacgt gatcaacttc tctcgatttt gttgtaacca ctgagctgag gtattatctg
     9901 ctccaattaa gaaaatggct tgcattccgg ttaaatcaaa tggtttttct ttaatagtcc
     9961 cgggagatag tttatgggaa acaatgggta aaatatcagc ctcactcact gaggctgaaa
    10021 tggaattcgg atagtttggt gcattttcat cgtgttccgg ttgcaaagat tcataaaaac
    10081 gtaccgcact ttcaccaccg aaatcagcaa tcacggttaa atcagcccaa gagaaatggg
    10141 acacatataa actaaacaat aatactttta ccttgttttg catttttacc tctgaagagt
    10201 attttggggt tctacccaaa ccattgcatt tttaggttca acccaaatca ttttattatc
    10261 cggctcaacc catttgaccg attttcccat ttggcttgtg ggataaacga aagctgcaac
    10321 tccggtatga atatgccctt gcttggagac agtcataaaa ttggcttctt gcttatgtgc
    10381 taaaaaacgt cctttttggt aattgagaaa gtctcttacc gtcatccaac ttttcattcc
    10441 attacgacgc atatttaaaa tgtcttcttt agtagctttc cccatcattg ctcgatgcag
    10501 cccatctaag ccgatattat gagccatata taaattctca tcagtaatag ggatattacg
    10561 gagttgaaat tgctcaatat gccaacgtgc caataatgcc gttgctaagg tattcgtata
    10621 tttatctcga cggggatcgg cgtaagaacc ccgatttttg gctgtaatca acttcatacc
    10681 aagttgcttt cccctctctg tttcagatag ccagttccag gttcccatag taaactgccc
    10741 aacaccggtt gctcctgttg gtgaaatgtt gccataccag ccatcttcca ttttgacaaa
    10801 acctcgtagc attgcttcac tcacctgata acgttgagca gccatacgaa tatagctgtc
    10861 aatttcagaa ccaaatccat tgaagggctt tgcctgagaa atgctaatgt tggaaagaaa
    10921 gactgcaaca atgactaata cacgagtgat gtccattcac catcctgttt gatttggtaa
    10981 gcagcgggca tttttcctaa cgaatatctc agccaatagc ctttatcgtg gttaagggta
    11041 atcaatcttt tactgacttt tattgggtca atattattgt cggcagccca tttacgaata
    11101 tcattatcgg agatgttttg cccaacaata taaatatcga gaggtgtttg attatttgcg
    11161 taagagagga ttttcccaag atcactttta caagaatcgc agttatcaaa acgggtaaaa
    11221 taaaccacac gacctaccga ttgagaaata tgtggttcaa cctcaaaagg tagctcattc
    11281 ggataaagtt tctcaaactc ctgacgataa actttgtcaa aatcaagttc ttttgacact
    11341 cgttcataat attttttcgc caacatacga gcatattttt ccctttcctc agcagttcgt
    11401 gcttcgatac ctaaagcagt taacggatct agatttggcg accacatacc tcgctcacct
    11461 ttcattaatt cggtataacg actccattct tcaacggtca atccccattc tttagcctgt
    11521 tttaggctat cacttaattg tgattgttga tgttggcttt gtttctgcaa agtcgattgt
    11581 gagctactta cggtctctgt ttgcatattt tgagccagag taggtaatgc aaaggacaat
    11641 aaaagaggta gtactgccaa cggtatagct ttacggcata aattaaactt cattgatatt
    11701 tccctcatta ttcctcaatg acctcggttt taattgttgt cgttgtaacg gcaacagcag
    11761 gtttatgagg gttttggaat gaactttccc gagctttaaa gcaaatcgta cgggatatat
    11821 cattaagagt tagttcataa gcgggacctg caatcatttg tagagcttca tataatttca
    11881 tcggaccgaa ttggtaatga acttttggaa gaggtcgggt aaaaagtgtt tgaaccgcat
    11941 taccttgttc tccgataggt ggataacaca aatctaaacc cgtattagtt aatgtagaac
    12001 gcaaaccttg ctggacattc gcagtaaaac gatttttagg attggagact ttgactgata
    12061 cgacttgttc aagcagatat ttttgacctt cctccggagc aatactgatt aaggtgtagc
    12121 gtccgtcacg taccacttcg gtattcgagg tagtctgttc ttggtaaata tctttggaca
    12181 cgatacggtc ttgtggaggt aattgttgca tttgaggtgt tagcaatgaa tcaggcatag
    12241 gtgtgatttc atcactattt tgagctgtat cctgttgatg aacacaacca cttaagccaa
    12301 gcataaaaac agtcattaag gatatttttg ttttcattta atctctccaa gtatgaaagg
    12361 aatctagacc aactatggcg aagtcattgc tgattttgaa tgatttattc tgttgttgat
    12421 tgagagaata aaaaaacgcc atcattagac ggcgtttgaa aacacaataa tgtgctgtgt
    12481 taatcggatt tctccttagt attcataaga aaataagatt gttgtacagc tacgatcagc
    12541 ttctgtgatg atataaagac tttcatcatc tacatcgtag cgagctacaa ttctccctcc
    12601 gtatttcatt gcttcctgat tcgctaattt atcttcctca cacaaattgc cccaatcacc
    12661 ataacagtaa cgattaagca attcaaccaa ggcattttga ttgaaacatt cagcaacagc
    12721 acgagttgta catactcgac caagttcaaa cgtcatacat ttctcctaaa taaaatacgg
    12781 ggaaatgtca cccattaggg gagtatttcc ccaagtgggt ggactaagac tgcggcaaga
    12841 gtcgttttta gtaaaaattt gcaaaaaatt aggcagctaa tttagccggc gtcatttctt
    12901 tacgaatctt gtctaacatt tcattccaat catctatatc acagattctt tggcgattaa
    12961 tgtaaaaatg cgtgtctatt gcattgatat agtagtcaaa ttcaactaaa tctgaatctt
    13021 gctcaatatc taattcagta cagaatcgtt gaattaagcg agagatgaca agctcctgat
    13081 acagattacc gaaatgtggt acagtttcaa attctttggc aacaagccaa aagtcttcaa
    13141 tactgacaat atcgctatat tcttctaaga tggcttccca ttgtcctaaa tagcaagaga
    13201 tatcatcaaa gtcaaaaaag gaatcttcca ttatgtttct ccaagtttta aataaaaagt
    13261 ggggaaacat acctaccgag aatgtttccc gatagggtgt atagtcaata ttagcgataa
    13321 atatcaccgc tcactgtgtt aattttacct aaaatagatt tacaatgaat gtcagcactc
    13381 acagttttca cattcgaggt tacattacca tccactgtga catcaccact gacagttgaa
    13441 acagatttgg catcgcctgt tacacgaaca ttttctgaac ctgcattgag gttggttaca
    13501 ttgccaaata cttcaatgtt gatagtcgga gagggttcta atgcaattgt ttgtccatca
    13561 acaattaata cattattgcc ggcagccatt gagatataac ctttatttat cccaacaact
    13621 gtttgcactg tactattaat gatttgaacg ctgttgatct ctttgccttt agagtcaaag
    13681 acttgtttac cgttgatata aataccttgt cgattcatat aataatcctc tttgtattag
    13741 atgttaaaat gctcgataga atacgatatt accattggaa atttcgttgc gagcagcctg
    13801 tacaaacgta gttaattttg ctaaagcagg tgtattagtt tgctctaatc ctactcgctc
    13861 taacatatct agatcttcta tgttcaatac caccgtagca tctttccaga atgtctcaat
    13921 aggttgatag tattccggtt ccgatgaggc tttaatttct tttttgaaga aatgaaaagc
    13981 catctcgttg tgaactaaga aaatccctct atcatcggct tcagtccaac ggaaaaactc
    14041 cttggaatgt tcaattaact gaatatctgt accataaatg gggttatccc aatcagacac
    14101 aatgttatat tcacgctcta agcctaacga attaaaacgt tcaagagaga ttgaatacgc
    14161 tctagcaagc caagaacgtt gagcccaaga tttttcaggg attacctgtg ccggattttt
    14221 tccgaaccaa tagcaatccc aatctaggta aatccaatcc ttttcctcta tgcttttgtc
    14281 aaaaccaata atagtaaagc cttgatcaag ccatttacca tagccgttct gaacaaagac
    14341 aacatcgcca acaataccat caaaatggcg accattaagg actgttggtg ataatgtttt
    14401 gacaaattgt tgaagtgagt tcatcgtgtt tctcctaaaa ttgtaaaata aaggaaaaca
    14461 caccgcaggg agtgtttccc tacgggacat aaagtaaagc ccaacataaa ttgtcgggct
    14521 tgggtaaaat tactcagatt gctcatctgc ttttggtttt tcttgataga cgatttcccc
    14581 atcaatttta atcattttga tgcggattaa gcgaccttta agagacactc cagtatcgcc
    14641 ttttttgtga tatttactgt cacttgaata agtgaaagta tcgaaccaca aatcagccat
    14701 tacaaatgat acaagcactt ttttctcttc agagaccgct ttttggcatt ttttgatgag
    14761 tgtttcggtt tctttaccga ctacattcat atcaaaatat ctgtactctg gtgagtcaga
    14821 ttcgccaaca agagctgcaa cacgacaagc ataaaaagga tttccttttt tatgctctac
    14881 taaacgaata tcgtttaaat agccaatgcc ggtagtatgt agattgaagt aatttttttg
    14941 agtagaagtt tgagttgtca tagtttgttt ctccaaatgt aaaaaagcgg agaaacatcc
    15001 ttacccaaca cgggaaaaat gttccccgca aggtggaagt aaaatggaat ctcaatgaat
    15061 attcactgaa atgataggga ttgagttggc attcctgcaa atttacagag ttccctttca
    15121 gaatgctggg agacattttg gcaataactc aactacctct aaggatagcc gtcgcttctc
    15181 aggagttatg cgacttatta agtgctgtta tatacagcgt cttaaattga ggataattta
    15241 gccatattga atcataaagt taattgagaa ttgaattttg attttagaga attggaaatg
    15301 acaacaccgt tgataaatca cttaccaacg gtgttgtact tttgaagaat aaatgaaatt
    15361 taagttagac caatataagt tactatattg aaaatagcag caccttcgtg acaatgttga
    15421 tattttcgtt cgtaatttac ccgattacct tgtggtcttt aatcggcata tctgtggcat
    15481 catcgaggac acaaacggca ccctttattc acctgtgggc tcaggctcag aatagttagc
    15541 agtaattgca acgtcataat ccccccaatc gggtaatatt atgacgttgc aatcacgatt
    15601 tagacaatta caacagacta atgtggctgg cattatccat ttaatgttta gttggcattc
    15661 ccacaaagtg gagttccctc tcagaatgct gggagacatt ttggctggtg tagattgata
    15721 accgacaatc tacaaaacgg gttctttgtt ccttgataat accataatct acttgaattt
    15781 ataactggct tcttaattta ttcagttgat cgagtacatt taaattacta cttttcttag
    15841 cagatttatt tgaagctgat tttacctttt tatcagcctc tttatgttgg caatctggat
    15901 aaccagtaca tccccagaat gttcccttag cgtgattgat ttttctcatt ggcttaccac
    15961 attctgaaca ttttcggatt tcaatattcc caagtgacat tccctgttgc atacaactgc
    16021 cgataagttg ttttacaaat gcttcttgct tttgcataaa tgcatcaagt gtcatactac
    16081 cttcggcaat ctgattgagg gcttgttccc ataatgccgt taaaccggga tttttcagta
    16141 agtccggcaa actatcaatt aaggcaacgg cttctgctga ggcaaccagt gattttttct
    16201 tcttaaggag aaatcctttg tcaattaggc cttgaattaa tccggcacgg gttgcttctg
    16261 tgcctaaacc ttccgtttca cgtaagcgtt gtttgagtct tgggtcagtc acaaagcgag
    16321 cggcattttt cattgcatcg agtaatgtcc cctctgtata gtgtgcggga ggtttagttt
    16381 gcaatgttcg gacttcagaa tgagtgacat tgcattgctg atttttagtc aatacaggta
    16441 atccttgttt ctcatcatca ttaccagttt cctcatccac atttttgcca aacaagatac
    16501 gccagccttg agcaacgatg acatttcccc gagcaaccag agtgtgccca ctagattgca
    16561 gagtggcaac ggttttatcc atttccaagt gcggtaagaa ttgagcaaga tatcggcggc
    16621 gaatgagatc atagaccttc atttcctcct cactcaattt acttaaatca gcttttttaa
    16681 tggttgggat aataccgtgg tgagcggtaa tttttttatc gtcccacgcc cgactttttt
    16741 gtcgcaaatt taatttaggc aagagagttt gtagccctga atcagaggca actaatgagc
    16801 ggattacgtt aggaacatca gaaaattgtg attctggcag ataaccacag tctgtacggg
    16861 gataagtcgt gattttatgc tcttcgtaaa gggattgtgc gatatccaac acctgctgag
    16921 ccccaaagcc aaacaagcgg ttacattcgc cttgtaaatc acttaatgcg tagagtaacg
    16981 gtggagattt tttctctcgt ttagtttcaa ccgtcaccac tttggctaag cctgtttgtt
    17041 taatttgagc ttcggcttgt tgtatgacac gactatcaag gcaaagtccg gactcatcca
    17101 aatactgttc aggtactgca agcccggcaa cgaaagtttc accagaggtt gttgtcagct
    17161 gaaccgctaa cgcataatga gatttaggca cgaaattagc aatttctcta tctcgattaa
    17221 ccacaagagt taatgttgga ctttgtactc gaccaacgct caatggctta ccggaatagc
    17281 cttttgcttg agccattaag gtaaataaac gggagaagtt cattccaatc aaccagtccg
    17341 agcggctacg tcccataccg gcgtagtaaa gagcctcggt ttctttacct gatttgagtg
    17401 tttgaagagc ctttcgaata ctggcatcat ccagagctga tagccagcaa cgttggattt
    17461 gacctcggta tccagctaaa tctaacagct cacgagcaat catctcacct tctcgatcag
    17521 catcggtcgc aatgaccacg gaggttgctt ttttgataag ccctattaca acagaatatt
    17581 gcttcttaga ctcttttttc ggtgtcattt tccactgagc aggaataatg ggtaatgttt
    17641 caaatgccca gcgtttccac gcttcatcat aatcttccgg ctgatattgc tcaacgagat
    17701 gcccgaaccc ccaagtgaca ataatagatt tatccgcagt cgccagcaag ccttcacctt
    17761 ttgaagtagc acccaatacg ccggcaagat ctcgagcttg agatggcttt tcacaaataa
    17821 ataatttcat attatttcct aaaatgaata cagataggca aatagtaatg tgctgattaa
    17881 atagcattca acgacttatt gtctcgtagg atgtaataat ttgagaaata aggacataaa
    17941 aaatcccagt gtttccactg ggaagaggtt ctaggagcaa tatgagttat tattttaatg
    18001 tattaagtaa acgctgtttt gcactatcga gccatctagc actaccagtt gctttccatt
    18061 caacattcac ctgattttta ctgccttttt caatgataac ttccaagtag ttttcaccta
    18121 agtgtacccc atcagtatct acatcagatt caaaatagcc ggaaacatgg taaaaagtac
    18181 cttgtaccgt atgataaact ttacgggagt cactatcagc attcgttggg cggaagccaa
    18241 attcccgacg aactttcagg aatacatcat caatattccg cttcaactgc aatgtgccgg
    18301 aatcttgata aacgtactta ccatttcggg ttttagtata aacttgtcgc ccattatgct
    18361 gttcaacaga gccgtcttta gagccataga gcgtctgatt catttgcccg gcccaatccc
    18421 caaccttatc gttaattgct gagagttcag cacagcctga aattagcatt gtagaaacaa
    18481 gaaataaact atatttgatg taacgcatag aattctcctt acaagcgggt tatctgcgtt
    18541 cattttttgc aaaagtgcgg ttaaaatcta cttaaaactc ttttacttac aaagagaaaa
    18601 aatattatag ctttctgtca cacagtagac catttagatc gggtctgctt agttgtgaga
    18661 ttgttaatat cgcagagata agttctaggc aacgttcaca gctatggaaa atatgagttt
    18721 gagatgacat atgggatata cgcacatttt cccagtcatc tgggtataca catccgtgaa
    18781 tttcagtcaa gtattgcttg atatgctctt ctgtggcttg ttcaacccag agctctagct
    18841 cagtttgata ctggtgtaat attttccatc gagttggagg gaaattcata tatttatcct
    18901 ctatcaaagt tatttttgca attatttcat caatgaagag agttaagaag tatttttatt
    18961 actcactata tggagagata tgttatgtgg aaaaaaatta ggattgattt tactgataca
    19021 gtgaaatgtc aattttgcag tagaatgatt acatcaggca aagctattgt tgttcaaaat
    19081 gaacttggca atatctcttt ttcaggaccg tcttgtgctc aaaataagaa cggtcagaat
    19141 gtagtcaatc ctaaagagaa aatagttgat atcacaaagg gatgtttact tcatgagcca
    19201 acaacaaatg ataaaacgga taagcaagta gatgttgagc aagataattt cacatccata
    19261 cacgatgacg aagtacataa ttatttggac aataatgctg ttaatgcata cctgacctta
    19321 agatttgaaa aactatcgca tttaacctcg attataaaat ctcaaaagtt aaatgaaatc
    19381 tatcataact atgaacttac agggcaaata tctcaaaaag atgaaagtta cataagagtg
    19441 attatgtatg gtgaggcata tcctttgtat acataccaaa acttacaagc tgtttatgct
    19501 gctgaatatt ggcttcaatc atttattcag cataatccag agaatgactt aaattttata
    19561 caagacacat taaatcagct cagaagaaag ctaacattaa ctgaaaaaca gattatgggc
    19621 ataaataatt ggtttaagaa ttctgatgga aaaatggtga aattaaagac aaatgctttt
    19681 gtaagaggga aatagttaac ataattgtgg tggccactta ttttgttacg taggcccgac
    19741 gtaagactgg ttttaaaaga ctctttccta ttatttgctt gcttattttg acaaattcaa
    19801 gttatatgta attcaaaacg
//
LOCUS       DANMCL010000053        19118 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.053, whole genome shotgun sequence.
ACCESSION   DANMCL010000053 DANMCL010000000
VERSION     DANMCL010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 19118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19118
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.053"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(102..1286)
                     /gene="tuf"
                     /locus_tag="PXF40_001635"
     CDS             complement(102..1286)
                     /gene="tuf"
                     /locus_tag="PXF40_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HDL5802963.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKHFGGAA
                     RAFDQIDNAPEEKARGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ
                     YDFPGDDTPIVRGSALQALNGVAEWEEKILELANHLDTYIPEPERAIDKPFLLPIEDV
                     FSISGRGTVVTGRVERGIIRTGDEVEIVGIKDTAKTTVTGVEMFRKLLDEGRAGENVG
                     ALLRGTKREEIERGQVLAKPGSITPHTDFESEVYVLSKEEGGRHTPFFKGYRPQFYFR
                     TTDVTGTIELPEGVEMVMPGDNIKMTVSLIHPIAMDEGLRFAIREGGRTVGAGVVAKI
                     IK"
     gene            complement(1346..3448)
                     /gene="fusA"
                     /locus_tag="PXF40_001636"
     CDS             complement(1346..3448)
                     /gene="fusA"
                     /locus_tag="PXF40_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HDL5802964.1"
                     /translation="MARTTPISLYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMSQQYPQHRINVIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRTGANFLRVVEQIKT
                     RLGGNSVALQLPIGAEDSFKGVVDLIKMKAINWNEADQGMTFTYEDIPADMLEACEEH
                     RAMLVEAAAEASEELMEKFFSGEELTEDEIKAALRQRVLAGEVIPVCCGSAFKNKGVQ
                     AMLDAVIDYLPAPTDIPAIKGINEDETEGERHASDDEPFASLAFKIATDPFVGNLTFF
                     RVYSGVINSGDTVYNSVKQKRERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVGTG
                     DTLCAIDAPIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAQEDPSFRVHTDEE
                     SGETIISGMGELHLDIIVDRMKREFKVEANIGKPQVSYRETIRTRVNDVEGKHAKQSG
                     GRGQYGHVVIDLYPLDAEGPGYEFVNEIKGGVIPGEYIPAVDKGIQEQLKSGPLAGYP
                     VVDLGVRLHFGSYHDVDSSELAFKLAASLAFKAAFAKASPVLLEPIMKVEVETPPDYV
                     GDVIGDLSRRRAMVNGQEANEFVVKINAEVPLSEMFGYATDLRSQTQGRASYSMEPLK
                     YAEAPKNVADAIIEARRK"
     gene            complement(3550..4020)
                     /gene="rpsG"
                     /locus_tag="PXF40_001637"
     CDS             complement(3550..4020)
                     /gene="rpsG"
                     /locus_tag="PXF40_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007526570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HDL5802965.1"
                     /translation="MPRRRSIEPRKILPDPKFGSELLAKFINVLMVDGKKSTAEKIVY
                     GALETLTQRSGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAADNKGSAVKKREDVHRMAEANKAFAHFRW"
     gene            complement(4151..4525)
                     /gene="rpsL"
                     /locus_tag="PXF40_001638"
     CDS             complement(4151..4525)
                     /gene="rpsL"
                     /locus_tag="PXF40_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HDL5802966.1"
                     /translation="MATINQLVRKPRVKKVVKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRIRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGAL
                     DCAGVKDRKQGRSKYGVKRPKA"
     gene            complement(4646..5605)
                     /gene="rfaC"
                     /locus_tag="PXF40_001639"
     CDS             complement(4646..5605)
                     /gene="rfaC"
                     /locus_tag="PXF40_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HDL5802967.1"
                     /translation="MKILIVKTSSMGDVLHTLPAITDMQNAIPDLKVDWVVEENFTEI
                     PAWHSAVNKVIPVAIRRWRKNLCQRQTWVECQQFLKQLKSEQYDAVIDAQGLIKSAVL
                     VTRQAKGKKFGYDKNSAREGLSSLFYDETFNIPYQQHAVERIRKLCAKSLGYALPTER
                     GDYCIAQHFAKNPQKTTAYIMLIHATTRADKHWQEAYWAELIQALDKHNLAVRLPWGN
                     QAEKERAERLASVANNAKVLPKMSLTDIATQLAGAAAVVSVDTGLSHLAAALDKPNVI
                     LYGATDPKLIGAYGQNQFYLKADKMENITSSQVLEKLLPLINK"
     gene            complement(5672..6709)
                     /gene="waaF"
                     /locus_tag="PXF40_001640"
     CDS             complement(5672..6709)
                     /gene="waaF"
                     /locus_tag="PXF40_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HDL5802968.1"
                     /translation="MNILVIGPSWVGDMMMSHALYQQLKIQYPNCQIDVMAPDWCCPL
                     LARMPEVRNAISMPIGHGSFRLCERYRLGKSLRNQYDMAIVLPNSLKSAFIPLFAKIA
                     RRRGWKGESRYFFLNDLRSNKNDYPMMVQRYVALAFEKATVPTAQQLPIAYPYLTTDS
                     EQIEQTKAKFEKQLAYAENRPAIGFCPGAEFGPAKRWPHYHYAILAKMLIEQGYSVRL
                     FGSKKDEAAGEQIRLALPENLQRYCLNLAGQTDLNQAVDLIADCNAVVSNDSGLMHIA
                     AALNKPLVALYGPTSPQYTPPLSQNAEIMRLIEGGLIKIRKGEGAEGYHQSLIDIQPE
                     MVMDKLAELLV"
     gene            complement(6820..7182)
                     /locus_tag="PXF40_001641"
     CDS             complement(6820..7182)
                     /locus_tag="PXF40_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HDL5802969.1"
                     /translation="MLVACSTVVTPVEQIHQVQKEKESVKKVTKLIAQAPKVSLYRCE
                     NDKKVEVERQGRTKKALKKEIVTVSYQGTTHQLSPSVTRDGKKYTNIRWTWHETRSGK
                     AFLYNNTKKTLAANCIKQ"
     gene            complement(7300..8619)
                     /locus_tag="PXF40_001642"
     CDS             complement(7300..8619)
                     /locus_tag="PXF40_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="opacity-associated protein A"
                     /protein_id="HDL5802970.1"
                     /translation="MTQNNFRKEPVFGESSVTSQDAEATKTDTAQAPYVSLRSTKAPG
                     HTFTPIMKRPDAKVEDHTADVFSAKQAKEFQFTPSSEATEAVEPDNTIHSVEESVSTA
                     SFNAVEAQENVEKEVVKPAPESFTTERIIPNAATAAAAATAAAAATKTKEIKAKMPPK
                     TRRLLLVALLALALLVLFFLLKPSTPETVEELQSQQGGSLPIEFRPVDEAEAKRAEEQ
                     ARAEQEAAEAAKAQEQAQAAQQESVTVAPAQTEQTMAKPSQDSQSQTQSQAVVEQPVA
                     VKPVENKPVVAQPAIKPKTENSVVFQPETTVKQQPKAPAKTEVKTERATLAAKETAKT
                     AAKPVEKAPTKTEAVKAAPAAESANAVATKTMTVPKGVSLMQVFRDNNLNISDVNAMS
                     KVNNVVSNLKVGERVTVRLDKNNRVVEMSIGSGGKFTRQANGSYTFK"
     gene            8912..9250
                     /locus_tag="PXF40_001643"
     CDS             8912..9250
                     /locus_tag="PXF40_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HDL5802971.1"
                     /translation="MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQI
                     TNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRTKNGNFKNIEQLAEVSGIGQATV
                     EKNRANIILE"
     gene            9415..10308
                     /gene="psd"
                     /locus_tag="PXF40_001644"
     CDS             9415..10308
                     /gene="psd"
                     /locus_tag="PXF40_001644"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251643.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5802972.1"
                     /translation="MQLKKYPVPTYFQRVKIALHYLLPQLAITRAAGWLAEQKWGVVT
                     HLIIKLFAKQYKVNLSEAKKTEPSDYATFNEFFIRELKENARPINQDPNTLCLPAEGK
                     VSESGEISDNRLLQAKGHHFTLETLLANDEEMAAKFKDGTFITTYLSPTDYHRVHMPC
                     DGTLRKMIYVPGELFSVNPFLAEHVPNLFARNERVICEFDTAFGPMLQILVGATVTAS
                     MSTVWAGVINPPRADEVVVWNYETEGEKAIKLQKGEEMGAFRLGSTVINLFPKGKVHL
                     NPALIAGMQTRMGEELGRIIN"
     gene            10380..12731
                     /locus_tag="PXF40_001645"
     CDS             10380..12731
                     /locus_tag="PXF40_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5802973.1"
                     /translation="MYTLQELKQMNEQEIRSRLISPAIRNAGWSDRQIGEEYTFKTNK
                     RFTDGQVVVDPKTTQTKRIEAKRVDYLLYTSANQKIAVVEAKDNHHSSRHGLQQAMTY
                     ARLLDVPFAYSSNGDEFVEHDFITGVQRTLPMSAFPTPDELHQRWAKQYTTEELKIIQ
                     QPYYTSSTDTFKEPRYYQEIAINRTVEAVAKGQQRILLVMATGTGKTYTAFQIIHRLK
                     TSGAKKKILFLADRNVLVDQPMMQDFKPFKDKMVKVSNKKLDSAYEVYLALYQQLDGE
                     TDNELFKQFQPSFFDLIVIDECHRGSAKEDSDWRAILKYFKDATHIGMTATPKETDDA
                     SNITYFGEPIYTYSLKQGIEDGFLAPYRVIRVDLDCDLKGWRPTKGLKDHQGNEIEDR
                     LYTVKDFDYNIVLNDRTRLVAERICEFLRKTDRLQKTIVFCANINHAERMVAELSRLN
                     ADMLKHNSKYVCQITGDQSGKGVDLEEFCDVANEGKDYPVIAVTSKLMTTGVDSKTCK
                     LVVLDANIQSMTEFKQIIGRGTRLRPDFGKEFFTILDFRGVTRLFADPAFDGEPVVIL
                     DVPENKPLVEQPLPKPSDKDIIKDPELKPYKIPVVVDFGTLKLRILDEKVQYLNEQGE
                     LVSEDIDLFSKREMQKEFGSYEQFQQQWTTSGEIFSKFYTDPKWLAALRQTRQFSHDV
                     EDFDVLSHISFGKKPLTKTERAEKVKQSGYVEQYSPENQQVLGLLLNEYVKSGNQDLT
                     KTEILKTPQFSRFGGLVSIIKNFGGKELYQKAVKGLEKMIYSE"
     gene            12779..14248
                     /locus_tag="PXF40_001646"
     CDS             12779..14248
                     /locus_tag="PXF40_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL5802974.1"
                     /translation="MSLNNIVKRLQDVMRNDAGINGDAQRIEQIVWILFLKIYDAKEQ
                     EWELENDEYHSILPNFLRWQNWAEDKKDGKAMTGDELLSFVNNELFPTLKNLPISADT
                     PMNQRIIRAAFEDNNNYMKNGVLLRQVINIIDEIDFAHYQERHAFGDIYENILKSLQS
                     AGNAGEFYTPRAVTDFMVQAIKPKLGERIADFACGTGGFLTSALKVLESQIQTLSDRT
                     LFNNSVYGIEKKALPHLLCITNLLLHDIDNPNVHHDNALEKSVKDYTENDKFDVILMN
                     PPYGGSEIEQIKKNFPTALQSSETADLFMSVIMYRLKQNGRAAVVLPDGFLFGTDNAK
                     VAIKKKLLEEFNLHTIIRLPHSVFAPYTSITTNILFFDKTEPTRETWVYRLDMPQGYK
                     NFSKTKPMKLEHFNEVVEWWGNRQVIEVEGFDKAKSFTLKEMSDRQYNLDLCGFPHEE
                     EEILPPDELIADYQRKRTAYNADIDKILAEITDILGIKL"
     gene            14261..15922
                     /locus_tag="PXF40_001647"
     CDS             14261..15922
                     /locus_tag="PXF40_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA binding domain-containing protein"
                     /protein_id="HDL5802975.1"
                     /translation="MLTWEHIEKMIAHQQFIREKAEIEYKEAKNSVPKDLWHTYSAFA
                     NSNGGFILLGIKENEQGHFPELLISGVNDPDKVIDELFSQSRSEKVSKSLLKDNDVKI
                     FQVENKSVIAIYVKAADILDRPIHLNGDYRLSYVRLNSGDHKLTSSELRSFISSYSQK
                     DADGRIVPYASIDDISLSTLDKYRNLLKAHNSTSKLLTLSDEKLLQEIGAYKKDLAQN
                     SEGITNAGLLMFGKHYAITSIFPHFFFEYYEEAGDVKRYTLRITDFDLEEGNLFEFYL
                     KIVPLIQELGKDKHFKLDNLTRTEENEITDGLREALINAITHADYFNNVRHLKVIKTK
                     DNKLIFENAGVMLVDIPTAIAGQRSECRNSIIHNLFHRLGLCERQGQGVRDIYSYWQS
                     RNFNSPLLESEIDYTKLTLTFQSGMIADFEEKFTACFGENFSELQPIQKDCLLFIAFN
                     QGKAMFAELAQKLPQYPRRNITLALARLKEKGLLTSSGSPRKQLYTLVNLEWIITEKS
                     QDDYFNPPFDQLDKASESKGAPPKKSKVKQVKQLPQNKANKLPPK"
     gene            16128..17648
                     /locus_tag="PXF40_001648"
     CDS             16128..17648
                     /locus_tag="PXF40_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5802976.1"
                     /translation="MKAQQLKNAILQLAIQGKLVPQDPNDEPASELLCKIQAEKDRLI
                     AEGKIKKNKKTADKAPYTIEPPFEIPESWVWVRLGDICLKITDGTHHSPPNIDKSDFL
                     YITAKNIKKDGLDLSKISYVTKEIHNEIFSRCNPEKGDILYIKDGATTGVSIINTLNE
                     PFSMLSSVALIKTSQEIDNEYLNYVMNSHYFYNISIGSMSGTGIPRITLTKLESYLVP
                     VPPLLEQQRIVQKIEELLPLVERYEQTEQQLTKLNNTFPEQLKKSVLHAAIQGKLTEQ
                     DPNDELASCLIERIKAEKNRLIAEKKLKKPKSVSEIVMRDNLPYEIKAGQERCIADEV
                     PFEIPQNWTWVRLGEVGDWSSGATPNRHNPEYYNGTIPWLKTGDLNNGIISSIPEFIT
                     DKALQECSVRLNPVGSVLIAMYGATIGKLGILKIAATTNQACCACIPFNGIYNKFLFY
                     YLMSQKAEFQKKSEGSGQPNISKEKIINYLFPLPPIHEQHRIVQKIEQLFAEIEKL"
     gene            17751..18554
                     /locus_tag="PXF40_001649"
     CDS             17751..18554
                     /locus_tag="PXF40_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5802977.1"
                     /translation="MIHLFEKHLNQSNLAENTQSAYLFAVKQYHKKFDQLSKINLQRY
                     KVFLIENYKPQTVNLRLRAINYYLEFIKKEKWKLSFVKVQQKPFLENVISEADYTYFK
                     KCLKKDNELYWYFVIRFMAATGSRVSELIQIKCEHIKIGYLDLYSKGGKLRRIYIPKS
                     LQKECSEWLRLNNKHNGFIFLNKYGDRITTRGIASQLKVFARRYKLDPKIVYPHSFRH
                     RFAKSFLERFNDIAFLADLMGHESIETTRIYLRKTSTEQQEIVNKIIDW"
     gene            complement(18600..>19118)
                     /locus_tag="PXF40_001650"
     CDS             complement(18600..>19118)
                     /locus_tag="PXF40_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5802978.1"
                     /translation="AGQERCIADEVPFEIPQNWIWVRLENYSLNHDRRRKPVSVAQRS
                     QQNKLYDYYGATGAIDKVASYIFDGKFILIGEDGGNFFTKKDVAFIVEGKFWANNHVH
                     VLSVDFNLEKYFCYYLNALNLPSMGLINGIAVPKLNQRNLNSILIAIPPISEQHRIVE
                     KIEKLFSEIEKF"
BASE COUNT         5809 a         3916 c         3660 g         5733 t
ORIGIN      
        1 gatatggcta gcttaatcgg cataaaagca aaagaggcat acctttcgat atgcctcttt
       61 ctagttttta tttagctttt caatttatca aacaatctta attatttgat gattttagct
      121 acaacgcccg cacctactgt acgaccacct tcacgaatcg caaaacgtaa accttcgtcc
      181 atcgcgattg ggtgaattag gctaacagtc attttgatgt tgtcgcccgg cattaccatc
      241 tctacacctt ccggtaattc gattgtacct gttacgtccg ttgtacggaa gtagaactgt
      301 ggacggtaac ctttgaagaa tggagtgtga cgaccacctt cttcttttga taatacgtaa
      361 acttctgatt cgaagtctgt gtgtggagtg attgaacccg gtttcgctaa tacttgacca
      421 cgttcgattt cttcacgttt agtaccacgt aataatgcac ctacgttctc acccgcacga
      481 ccttcgtcta ataatttacg gaacatctca acacctgtta cggttgtttt cgctgtatct
      541 ttgataccta cgatttcaac ttcatcacca gtgcggatga taccacgctc aacacgacct
      601 gttactactg taccacgacc tgaaattgag aatacgtctt cgattggtaa taagaatggt
      661 ttatcaatcg cacgctcagg ctctggaatg tatgtgtcta agtggtttgc taattcaagg
      721 attttctctt cccactctgc tacgccgttt aacgcttgta acgctgaacc acgtacgatt
      781 ggagtgtcat cacctgggaa gtcgtattgt gaaagaagtt cacgcacttc catctcaact
      841 aattctaata actcttcgtc atctaccatg tcgcatttgt ttaagaatac gatgatgtat
      901 ggtacaccta cttggcgacc taataagatg tgctcacgag tttgtggcat tggaccgtca
      961 gttgctgcta ctactaagat agcgccgtcc atttgtgccg caccggtaat catgttttta
     1021 acatagtccg cgtgtcccgg gcagtcaacg tgtgcgtagt gacgagttgc tgtatcgtac
     1081 tcaacgtgtg aagtgttgat ggtgatacca cgcgcttttt cttctggcgc gttatcgatt
     1141 tggtcaaatg cacgagctgc accaccgaag tgttttgcta atacggtagt gattgctgct
     1201 gttaaagttg ttttaccatg gtcaacgtgg ccgattgtac ccacattaac gtgcggtttt
     1261 gtacgttcaa atttttcttt agacacttta atatcttcct aaaaaatgag ccatagccct
     1321 attgctatgg ctcaggttaa acaaattatt ttctacgagc ttcaataatt gcatcagcaa
     1381 cgtttttcgg tgcttcagca tattttaaag gttccataga gtatgatgca cgaccttgag
     1441 tttgtgaacg taagtctgtt gcataaccaa acatttctga aagtggaact tcagcattga
     1501 tcttaacaac gaactcgttc gcttcttgac cgttaaccat tgcacgacga cggcttaagt
     1561 caccgattac atcacccacg taatccggtg gagtttcaac ttccactttc atgattggct
     1621 caagtaatac cgggcttgct tttgcgaacg ccgctttaaa tgctaatgat gcagcaagtt
     1681 taaacgcaag ttcagatgag tcaacatcgt ggtatgaacc gaagtgtaaa cgcacaccta
     1741 aatctactac cgggtaacct gctaacggac cagatttaag ctgttcttgg atacctttat
     1801 caaccgcagg aatgtattca ccagggatta caccaccttt gatctcgttt acaaactcat
     1861 aacccggacc ttcagcatct aatgggtata agtcgatcac aacgtgacca tattgaccac
     1921 gaccaccaga ttgttttgcg tgtttacctt caacatcatt aacacgagta cggatagttt
     1981 cacggtaaga tacttgtggt ttaccgatat ttgcttccac tttaaactca cgtttcatac
     2041 ggtcaacgat gatgtctaag tgtaactcac ccatacctga aatgatcgtt tcaccagatt
     2101 cttcatctgt gtgaacacgg aatgaagggt cttcttgtgc taaacgacct aaagctaagc
     2161 ccattttctc ttggtcagct ttggtttttg gttcaaccgc aacagagatt accggctcag
     2221 ggaattccat acgctcaaga atgattggtg catcgattgc acataatgtg tcacctgtac
     2281 caacatcttt taaaccgatt gctgcagcga tatcgcccgc acgaacttct ttgatctctt
     2341 cacgtttgtt tgcgtgcatc tgtacgatac gaccaaaacg ttcacgtttt tgttttactg
     2401 agttgtaaac tgtatcacca gagttaatta caccagagta aacacggaag aaggttaagt
     2461 tacctacgaa tgggtctgtt gcaattttga atgctaatga agcaaatggc tcatcgtcgc
     2521 ttgcgtgacg ctcaccttca gtttcatctt cattgatacc tttaattgca ggaatatcag
     2581 ttggtgccgg taagtaatcg attaccgcat caagcattgc ttgtacacct ttgtttttaa
     2641 atgcagaacc acagcaaaca gggattactt cacctgctaa tacacgttga cgtaatgctg
     2701 ctttgatttc atcttcagtt aattcttcac cagagaagaa tttttccatt aattcttcag
     2761 aagcttcagc tgctgcttca acaagcattg cacggtgttc ttcacaagct tcaagcatat
     2821 ctgccggaat atcttcataa gtgaaggtca taccttgatc agcttcgttc cagttgattg
     2881 ctttcatttt gattaaatca acaacacctt tgaagctgtc ttctgcaccg attggaagtt
     2941 gtaatgcaac tgagttacca cctaaacgcg ttttgatttg ctcaacaaca cgtaagaagt
     3001 ttgcacctgt acggtccatt ttgtttacga acgcgatacg tggcacttta tatttgttag
     3061 cttgacgcca tacagtttca gattgtggtt gaacaccacc aactgcacaa taaaccatca
     3121 ccgcaccatc aagtacacgc attgaacgtt ctacttcgat agtaaagtca acgtgtcccg
     3181 gagtatcaat aacgttgata cggtgttgtg gatattgttg tgacatacca gaccagaatg
     3241 ctgttgttgc agcagatgtg atcgtgatac cacgctcttg ttcttgttcc atccagtcca
     3301 ttgttgcagc accatcgtga acttcaccga ttttgtgact tacacctgta tagaacaaga
     3361 tacgctctgt agtagttgtt ttacccgcat cgatgtgcgc actgataccg atgttacggt
     3421 aaagtgaaat aggggttgta cgagccattt ttatttatta ccttgtttgg ggtttaaatt
     3481 aaaattctta ataagggtaa ggcttcaccg caaactgaga tgaagccttt gataagtttg
     3541 cttaaacgat taccaacgga agtgagcaaa cgctttgtta gcttcagcca tacggtgaac
     3601 gtcttcacgt ttcttcactg ctgaaccttt gttgtctgct gcatctgata attcgttagc
     3661 taaacgtaat gccattgatt tgtcaccacg tttacgagcg gcttctacga tccaacgcat
     3721 tgctaaagca ttacgacggg ttgggcgaac ttctacagga acttggtaag tagaaccacc
     3781 cacacggcga gatttaacct caacagttgg acgtacgttt tctaatgcga tttcgaaagc
     3841 ttctaacgct tctttaccag aacgttgtgt taaagtttct aatgcaccgt aaacgatttt
     3901 ttctgcagta gattttttac catctaccat taacacgtta ataaattttg caagtaattc
     3961 tgaaccgaac ttcggatctg gaagaatttt gcgtggttca atactacgac gacgtggcat
     4021 tggaaatttc tccgtatatt aaatcttcag gatatccaaa actcatctaa tctgccttaa
     4081 ggcatcttga ctggagttta tggtttaaat attaaaattt agacgtttgg ccttactcaa
     4141 cggagaacca ttaagcttta ggacgtttaa cgccgtattt agaacgacct tgtttacgat
     4201 ctttaacgcc tgcacagtca agtgcaccac gtacagtatg gtaacgaaca cccggtaagt
     4261 ctttaacacg accaccacgg attaatacaa cactgtgttc ttgaaggttg tgaccttcac
     4321 caccgatgta tgaagttact tcaaagccat ttgttaaacg aatacgacat actttacgta
     4381 atgctgagtt cggtttttta ggtgtagtag tgtatacacg agtacacacg ccacgtttct
     4441 gcgggcaagc ctctaatgca ggaacgttac tttttacaac ctttttcaca cgcggtttgc
     4501 gtactagctg gttgatagtt gccattaaaa aagctccagt taaaattatt aaaaataaaa
     4561 ttaaaaacat cctttcacac gaaaggacgg tgaattctaa attgaacgtg gataaaagtc
     4621 aagcacagta agagaacaac aatgatcatt tgttaatcaa tggaagtaat ttttctagca
     4681 cttgtgaaga ggtaatattt tccattttat ctgcttttag ataaaactga ttttgcccgt
     4741 aagccccgat aagttttgga tcggttgccc catataaaat cacatttggc ttatctaacg
     4801 cagccgccaa atggctcaag ccggtatcca ccgacaccac tgccgctgct cccgcaagtt
     4861 gagtagcaat atcggttaag ctcatttttg gcaatacctt agcattattc gccacactcg
     4921 ctaaacgctc cgcccgttct ttttcggctt ggtttcccca aggcaatctg actgccagat
     4981 tgtgcttatc caacgcttga atcaactccg cccaataggc ttcttgccaa tgtttatccg
     5041 ctcgggtagt ggcgtgaatc agcataatgt aagcggtcgt tttttgagga ttttttgcaa
     5101 aatgttgtgc aatgcaataa tcgccccgtt cggttggcaa agcataacct aatgattttg
     5161 cacataattt tctgatgcgt tctacagcgt gttgttggta ggggatatta aacgtttcat
     5221 cgtaaaacag actacttaac ccttctcggg cagagttttt atcatagcca aattttttgc
     5281 ctttggcttg gcgagttact aacaccgcac ttttaatcag cccttgagca tcaattaccg
     5341 catcatactg ctcacttttt agctgtttta aaaactgctg gcattctacc caagtctgtc
     5401 tttggcaaag gtttttccgc cagcggcgaa tagccaccgg aattacttta tttaccgctg
     5461 aatgccacgc aggaatttcg gtaaaattct cctccaccac ccaatctact tttaaatcgg
     5521 gaatagcatt ttgcatatcg gttatggctg gaagcgtatg taatacatct cccattgatg
     5581 aggttttaac gattaaaatt ttcatctttt ataaacaaac aagcggtctt tttttgcaaa
     5641 aaattggcaa attcaaccgc ttgttatcca tttaaactaa cagttcagct aatttgtcca
     5701 tcaccatttc aggctgaata tcaattaaac tttggtgata gccctctgcc ccttcgcctt
     5761 tgcggatttt aatcaaaccg ccttcaatta agcgcatgat ctcggcattt tgggataacg
     5821 gcggcgtata ttgtgggctg gtcggtccat ataaggcgac cagcggttta tttagtgctg
     5881 cggcaatgtg cattaagccg gagtcattgc tcacgactgc attacaatct gcaatcaaat
     5941 ctaccgcttg gtttaaatcg gtttgcccgg ctaaattcag gcaatagcgt tgtaaatttt
     6001 caggtaatgc caagcgaatt tgctcaccgg cggcttcatc ttttttcgag ccaaataacc
     6061 gtaccgaata gccttgctca atcaacattt ttgccaatat tgcataatga taatgcggcc
     6121 aacgttttgc cggtccaaat tcagcccctg gacaaaagcc gatggcagga cggttttccg
     6181 cataagccaa ctgtttttca aatttcgctt tggtctgctc aatttgttcg ctatcagttg
     6241 tgaggtatgg ataagcaatc ggcaactgtt gtgcggttgg aacagtagcc ttttcaaacg
     6301 ccaaggctac atagcgttgc accatcattg ggtagtcgtt tttattactg cgaagatcat
     6361 ttaagaaaaa atatctactt tcccctttcc aaccacgacg tctcgcaatt ttcgcaaaca
     6421 gtggaataaa ggcagacttt aatgaattag gcaatacaat cgccatatca tattgatttc
     6481 tcagggattt tccgagtcgg tagcgttcac acaaacgaaa tgaaccgtgt ccaatcggca
     6541 ttgaaatcgc attacgcacc tcaggcatac gggctaaaag cggacaacac caatcgggtg
     6601 ccattacatc aatttggcaa ttcggatact gtattttaag ctgttgataa agtgcgtgcg
     6661 acatcatcat atcacccacc caagacggtc ctataactaa aatattcatt tgcaaaattc
     6721 tcttaaaaat ttattcacaa tccttgtaag gattgttcac agcttcgctg ccgttggcaa
     6781 agccaacgtt caaaaagcga tactttttgt gtccgcttgt tactgcttta tgcaatttgc
     6841 cgctaacgtt tttttagtgt tgttatacaa aaatgcttta ccactacggg tttcatgcca
     6901 agtccaacgg atattagtgt attttttacc atctctcgtt acagaaggtg aaagctgatg
     6961 cgttgtccct tgataactca ctgtgactat ttcctttttt aacgcttttt ttgttcgtcc
     7021 ctggcgttca acttcaacct tcttatcatt ctcacaacga tataaactca ctttaggtgc
     7081 ttgtgctatc agtttagtca ctttctttac tgactctttt tccttttgta cttgatgaat
     7141 ttgctcaaca ggggtaacca ctgtactaca agcaactaac atcgctgagc ttagcgttaa
     7201 gtagataagt ttgtaagagg ggcaaaataa attcatcctt tatctccttt ttaaataaaa
     7261 gagcaacgtt tgtagcgttg ctctttttct tcattttatt tatttaaaag tatagctacc
     7321 gtttgcttga cgggtaaatt tgccgcctga gccaatgctc atttcaacca cacggttatt
     7381 tttatctaaa cgaacggtta ctcgctcgcc tacttttaaa ttactcacca cgttattgac
     7441 tttgctcatc gcattaacgt ctgagatatt taaattgtta tcacggaaca cttgcattag
     7501 tgatacacct tttggcacag tcattgtttt ggttgctacc gcatttgccg actcggcagc
     7561 cggtgctgct tttaccgctt cagtttttgt cggagctttc tcaactggtt tagctgctgt
     7621 ttttgccgtt tcttttgctg ccagtgtagc acgttcggtt ttcacttcag ttttagcagg
     7681 ggctttaggc tgttgtttta ccgttgtttc aggttggaac accacgctat tttccgtttt
     7741 aggcttaatc gccggttgtg caacaaccgg tttattttcc accggtttca ccgcaacagg
     7801 ttgctcaact actgcttgtg attgtgtttg cgactggcta tcttgtgacg gtttagccat
     7861 tgtttgctcg gtttgggctg gagcaactgt tacagactct tgttgagcgg cttgagcttg
     7921 ttcttgagct tttgcagctt cagcggcttc ttgttctgca cgagcttgtt cttccgcacg
     7981 tttcgcttca gcttcatcaa ccggtcggaa ttcaatcggc aagctaccac cttgctgaga
     8041 ttgtagctct tcgacagttt ccggcgtact tggttttaac aagaaaaaca gtaccaataa
     8101 tgctaacgcc aacaatgcca ctaataataa acggcgggtt ttaggtggca ttttagcttt
     8161 aatctctttg gttttagtgg ctgcagctgc cgcagtggct gctgcggcag ctgttgccgc
     8221 atttggaata atacgctcag tagtgaaact ctcgggtgca ggtttaacca cttctttttc
     8281 cacattttct tgtgcttcaa ccgcgttaaa agatgcggtt gatacacttt cttcaaccga
     8341 atgaatggta ttatccggct ctactgcttc tgtagcttct gaacttggag taaattggaa
     8401 ttcttttgcc tgcttagccg aaaagacatc agccgtatga tcttctactt tagcatcagg
     8461 tcttttcata attggggtaa acgtatgccc cggtgctttg gttgaacgca acgaaacata
     8521 aggggcttga gctgtatctg ttttggttgc ttcagcgtct tgagaggtaa ccgaagattc
     8581 accaaaaacc ggttctttgc gaaaattatt ttgtgtcata ttaattccaa ataatagcgt
     8641 tgttaatgag tataaaaatg gcgatattct aaagcaattc agccgctatt tgaatttatt
     8701 taactaaatt tacgcaacta gcggtcattt ttgcctaatt ttttgcaaat ctatttactt
     8761 tcattgaatt tcagaccaaa tgcacgtcta gaagtttagc cattttctat tttttcgatc
     8821 tgtgtcgaaa aatttatttt tgccggttga gttctatttt attccctctt aatcttcctt
     8881 tcgacctttc aacaactaat aaggaaatcc tatgaagaaa atcaaacaac ttggtctaac
     8941 attcttgttt ggcttaaatg caatggcttt tgcccaaaca ccgccaacta caatgcctgt
     9001 tgaacaaaat gcagtcactc aacccgtaca gcaaacacaa atcaccaacg ctaatgcggt
     9061 aaatatcaat actgctagtg ctgctgaatt gcaagacaag ctagtgggaa ttgggcagaa
     9121 aaaagctcaa gcgattgtcg attaccgtac taaaaacggc aattttaaaa acattgagca
     9181 acttgctgaa gtctccggaa ttgggcaagc aacggtagaa aaaaatcgag ccaatattat
     9241 tttagaataa gacaaccaaa ttgttgaagt ggaattccta caaagcccct atctgttttt
     9301 ttctttgtag ccacttcaac accttaaaga ttttttatct attttgcatt gtatttgcta
     9361 tacttcgccc ccaattaaac gcaaattctc gtttttaaat aaaaggaaaa cgcaatgcaa
     9421 ttaaaaaaat atccagttcc aacctatttc caacgtgtga aaatcgctct gcactattta
     9481 ctgccacaac tggcaattac ccgtgcggca ggttggttag cagagcaaaa atggggcgta
     9541 gttactcacc ttatcatcaa actgtttgca aaacagtata aagtcaattt atctgaagct
     9601 aaaaaaaccg agccgtcaga ttatgctact tttaatgaat tttttatccg tgaattaaaa
     9661 gaaaacgcac gcccgattaa tcaagatcca aatacacttt gcttaccggc agaaggtaaa
     9721 gtcagcgaat caggcgaaat ttcggataac cgtttattac aagcaaaagg gcatcatttt
     9781 acgctagaaa ccttattggc aaatgatgaa gaaatggcgg caaaatttaa agacggcaca
     9841 tttattacca cctacttatc gccaactgat taccatcgtg tacatatgcc gtgcgatgga
     9901 acattgcgta aaatgattta tgtgccgggc gaattgttct ccgtcaatcc gtttttagcc
     9961 gaacacgttc caaacttatt cgctcgcaat gagcgtgtga tttgtgaatt tgacaccgca
    10021 ttcggaccaa tgctacagat tttggtcggt gcaacggtta ccgcaagtat gagtacggtt
    10081 tgggctggcg taattaatcc gcctcgcgct gatgaagtgg tagtttggaa ttacgaaacc
    10141 gaaggcgaaa aagccatcaa actccaaaaa ggcgaagaaa tgggagcttt ccgtttaggc
    10201 tcaaccgtaa ttaacctctt cccgaaaggt aaagtacatc tcaaccctgc acttattgca
    10261 ggaatgcaaa cccgaatggg ggaagagttg ggtagaatta tcaattaaat cctgagttaa
    10321 ttttacctaa actgtttgct ataatcttcc gataagaaac tcttatcgga aggaaaaata
    10381 tgtacacact tcaagaatta aagcagatga acgagcaaga aattcgctct cgattaatct
    10441 ctcctgcaat tagaaatgca ggatggtcgg atagacaaat tggcgaagag tacacattta
    10501 aaaccaataa acgatttaca gatgggcaag tagttgttga tccaaaaacg acgcaaacta
    10561 aacgcatcga agcaaaacgg gttgattatc tgctctatac ttccgcaaat caaaaaattg
    10621 ccgtggtcga ggccaaagat aaccatcact cttcccgaca cggcttacag caagcaatga
    10681 catacgctcg attgcttgat gtcccttttg catatagctc aaatggtgat gagtttgtgg
    10741 aacacgattt tatcactggc gtacaacgaa cccttccgat gtcagcattt cctactcccg
    10801 acgaactcca ccaacgttgg gcgaaacaat ataccaccga agagctgaaa attattcaac
    10861 agccttatta caccagtagc actgacacct ttaaagagcc tcgttactac caagaaattg
    10921 cgattaaccg tactgttgaa gctgtagcaa aaggtcagca gaggatttta ttggtaatgg
    10981 caacaggcac gggtaaaacc tatacggctt tccaaattat ccatcgttta aaaaccagtg
    11041 gtgcgaaaaa gaaaatttta tttcttgccg atcgcaatgt actagtcgat cagccaatga
    11101 tgcaagactt caaaccgttt aaagacaaaa tggtgaaagt cagcaataaa aagctcgaca
    11161 gtgcttatga agtctatctt gcactttatc aacagcttga cggtgaaacc gataacgaac
    11221 tgtttaagca gttccaaccc tctttctttg atcttattgt gatcgatgaa tgtcatcgtg
    11281 gttcagcaaa agaagattct gactggcgtg ctattttgaa gtatttcaag gacgccaccc
    11341 atatcggtat gactgcaacc cccaaagaaa ccgatgatgc cagcaacatt acctattttg
    11401 gcgagccgat ttatacctat agcctcaaac aaggtattga agacggcttt cttgcccctt
    11461 atcgagtgat tcgtgttgat ctggactgtg atttaaaagg ctggcgacca accaaaggtt
    11521 taaaagatca tcaaggtaat gagattgaag atcgcctcta tacagtcaaa gatttcgatt
    11581 acaacattgt gctaaatgat cgcacccgct tggttgcgga gagaatttgc gaatttttac
    11641 gcaaaaccga ccgcttgcag aaaacaatag tcttctgtgc caacatcaac catgcagagc
    11701 gaatggtggc agagctttca cgcctcaatg ccgatatgtt gaaacacaat tccaaatatg
    11761 tctgccaaat tacaggcgac caatcaggca aaggcgttga tttagaagaa ttttgtgatg
    11821 tagcaaatga agggaaagat taccctgtga ttgccgtaac ctctaaattg atgacaacag
    11881 gtgtagatag caaaacctgt aagctggttg tacttgatgc aaacattcaa tcaatgacgg
    11941 aatttaaaca aattatcgga cgaggcactc gtcttcgccc tgatttcggc aaagaatttt
    12001 tcaccatttt agattttcga ggcgttactc gcctgtttgc tgatccggca tttgatggtg
    12061 agccggtggt gattttagat gtaccggaaa ataagccact tgtcgaacaa ccgcttccta
    12121 aacccagtga taaggacatc attaaagacc ccgagctaaa gccatataaa atcccggtag
    12181 ttgtcgattt cggcacactc aaattacgca ttttagacga gaaagtccaa tatctgaatg
    12241 agcagggcga gctggtttct gaagatattg atctgttctc aaaacgggaa atgcaaaaag
    12301 agttcggcag ttacgaacag ttccaacagc aatggacaac aagcggtgaa attttctcga
    12361 aattttacac cgatccaaaa tggctggcag cccttcgcca aacacgccaa ttcagccacg
    12421 atgttgaaga ctttgatgta ttaagccaca tctcctttgg caaaaaacca ctgactaaaa
    12481 ccgaacgagc agaaaaagtg aaacaaagtg gctatgtgga gcagtattcg cccgaaaacc
    12541 agcaagtttt agggttgctg cttaatgaat atgtcaaatc cggcaatcaa gatctgacta
    12601 aaaccgaaat tttaaagaca ccgcaattca gccgttttgg aggtctagtg tctattatta
    12661 aaaatttcgg cggtaaagaa ctctaccaga aagcggtaaa aggcttagaa aagatgattt
    12721 attcggaata acaagcggtt attttacaac aaaattttac agataaacaa ggatcacaat
    12781 gagcctcaac aacatagtaa aacgcctgca agatgtaatg cgtaacgatg cagggattaa
    12841 cggtgatgcc caacgcattg aacagatcgt ctggatctta ttcttgaaaa tttacgatgc
    12901 taaagaacaa gagtgggaac tggaaaacga tgaatatcac tcaattttgc cgaatttttt
    12961 acgctggcaa aattgggcgg aagataaaaa agacggcaaa gcgatgactg gtgatgaatt
    13021 actctctttc gtcaataacg aacttttccc gactttaaaa aatctgccta tttcagccga
    13081 tacgccgatg aaccaacgga ttatccgtgc tgcttttgaa gataataaca actatatgaa
    13141 aaatggggtg ttattacgtc aggttatcaa tatcattgat gaaattgatt ttgcccatta
    13201 ccaagaacga cacgcctttg gcgatattta tgaaaatatc ctcaaaagtt tacaaagtgc
    13261 aggtaatgca ggggaatttt atacccctcg cgctgtaacc gattttatgg tacaagcaat
    13321 caaaccgaaa cttggcgaac gcattgccga ttttgcctgt gggacgggtg gttttttaac
    13381 ttcggcgtta aaggtattgg aaagtcaaat tcaaaccctt tctgaccgca ctttattcaa
    13441 taattctgtg tatggcattg agaaaaaagc ccttcctcac ctgctttgta ttaccaattt
    13501 attgttgcac gatattgata atccgaatgt acatcacgat aatgctctag aaaaatcggt
    13561 caaagattac accgaaaatg ataaatttga tgtgattttg atgaatccac cttacggagg
    13621 ttcagaaatt gagcaaatta aaaagaattt ccctacggct ttacagagca gtgaaaccgc
    13681 tgatctgttt atgtcggtaa ttatgtaccg cctaaaacag aatggacggg ctgcggtggt
    13741 gctgcctgac ggatttttgt tcggcacaga taatgccaaa gttgcgatta agaaaaagct
    13801 attagaagag tttaatctgc atacgattat ccgcttaccg catagtgtct ttgcccctta
    13861 tacctcgatt acgactaata ttctgttttt tgataaaacc gagccaaccc gtgaaacttg
    13921 ggtttatcgc cttgatatgc cacagggtta taaaaatttc tccaaaacta aaccgatgaa
    13981 attggaacat ttcaacgaag ttgttgaatg gtggggaaat cgccaagtga ttgaagtcga
    14041 agggtttgac aaagcgaaaa gttttacatt aaaggaaatg tccgaccgtc aatacaacct
    14101 cgatttatgt ggctttcctc acgaagaaga ggaaatcctt ccgcctgatg aactaattgc
    14161 agattatcag cgaaaacgca ccgcttacaa tgctgatatt gataagattc tagcagaaat
    14221 taccgatatt ttaggcatta aactgtaata ggagcataaa atgctgactt gggaacatat
    14281 cgaaaaaatg attgcacatc agcaatttat ccgagaaaag gcagaaattg aatataaaga
    14341 ggcaaaaaat agtgtgccaa aagatctttg gcatacttat tcggcttttg caaacagcaa
    14401 tggtggcttt attttattag gaataaagga aaatgaacaa ggacattttc ctgaactgct
    14461 aatttctggt gttaatgatc ctgataaagt cattgatgaa ttattttccc aatctcgtag
    14521 tgaaaaagtc agtaaatcct tattaaagga taatgatgtg aaaatctttc aagttgaaaa
    14581 taaaagcgtg attgcaattt atgtgaaagc agctgatatt ttagaccgtc ctatccattt
    14641 aaatggtgat tatcgacttt cttatgttcg tttaaattca ggcgatcata aactcacctc
    14701 ctctgaactg cgttctttca tttcaagcta tagccaaaaa gatgctgatg ggagaattgt
    14761 gccttatgct tctattgatg atatcagttt aagcacattg gataaataca gaaatctgct
    14821 gaaagcccat aacagcacat caaaattact tacgttatcc gatgagaaat tgctgcaaga
    14881 aattggggct tataaaaaag atttagcaca gaatagcgag ggcattacca atgcaggctt
    14941 attgatgttt ggtaagcact atgccattac aagcatattt ccccacttct tttttgaata
    15001 ttacgaagaa gctggtgatg taaaacgcta tacattacgg attaccgatt ttgatcttga
    15061 agaaggcaat ctctttgaat tttacttgaa aattgtgcca cttattcaag agcttggtaa
    15121 agataaacat ttcaaattag ataatttaac ccgtactgag gaaaatgaaa ttactgacgg
    15181 gctacgggaa gctctaatca atgcaattac tcacgcagat tactttaaca atgttcgcca
    15241 tctaaaagtc attaaaacca aagataacaa actgattttt gaaaatgcag gagtaatgtt
    15301 ggttgatatt cccacggcta ttgcagggca aagatcggaa tgccgtaatt ctattattca
    15361 taacttattc caccgtttag ggctatgtga gcgacaagga caaggcgttc gggatattta
    15421 ttcatattgg caaagccgaa atttcaattc accgctttta gaaagtgaaa ttgattacac
    15481 taaactcacc ttaacttttc aatcaggtat gattgcagat tttgaggaaa aatttaccgc
    15541 ttgctttggc gaaaatttct ctgagttaca gcctattcaa aaagattgct tactctttat
    15601 cgccttcaat caaggtaaag caatgtttgc agaattagca caaaaactgc cccaatatcc
    15661 acgcagaaat attactttgg cactagcacg actgaaagaa aaaggcttac taaccagttc
    15721 ggggagtccg agaaaacaac tctataccct agtgaattta gaatggataa tcacagagaa
    15781 atcacaagat gattatttta atccaccttt cgaccaactt gataaagcta gtgagagtaa
    15841 gggcgccccc ccgaagaaaa gcaaagtgaa gcaagtcaaa caattacccc agaacaaagc
    15901 aaacaaatta cccccgaagt aaatcgctta ctttcagtgt tgcttgagcc gatgaagagc
    15961 aaagaaatta tgaaaaaact caggttaaaa gatgataagc atttccgtat gcagtattta
    16021 aaacctgcac taacgcttgg tgtgatcgaa atgcaattcc cagaaaaccc aaaacaccgt
    16081 aatcaaagat actttaagaa ataacaaccg attattgaga ataaaaaatg aaagcccaac
    16141 agctaaaaaa cgcaatccta caactagcaa tccaaggcaa gctcgttcca caagatccaa
    16201 atgatgaacc ggcaagcgaa ctcctttgca aaatccaagc agaaaaagac cgcttgattg
    16261 cagaaggaaa gatcaaaaaa aacaaaaaaa ctgccgataa agccccttat accattgaac
    16321 caccttttga gattcctgag agttgggtgt gggtgaggtt gggggatata tgcctaaaaa
    16381 ttacagatgg aactcatcat tctcccccaa atatcgataa gagtgatttt ctttatatta
    16441 cagctaaaaa tataaagaaa gatggattag atttatcaaa aattagctat gtaacaaaag
    16501 aaattcataa tgaaattttc agccgttgta atcctgaaaa gggagatatt ctatatatta
    16561 aagatggagc cacaactgga gtaagtatta taaatactct taatgagcca tttagtatgt
    16621 tatccagtgt tgccttaatt aagacctcac aagaaataga taatgagtac ttaaattatg
    16681 taatgaatag tcattatttt tataacattt ctattggaag tatgtctgga acaggtattc
    16741 caagaataac attaactaaa ttagaatctt atttagtccc agttccgcca ctcctagaac
    16801 aacagcgcat tgtgcaaaaa atcgaggaat tattaccgct tgttgaacgc tacgagcaaa
    16861 ccgaacagca actcactaaa ctcaacaata cattccccga acagctgaaa aaatcggtgt
    16921 tacacgcagc tattcagggt aaattaaccg agcaagatcc gaatgatgaa ctggcatctt
    16981 gcctgattga gcggataaaa gcggagaaaa atcgtcttat tgccgagaaa aaactcaaaa
    17041 aaccaaaaag tgtttcagag attgtaatgc gtgataattt accttatgag atcaaagcag
    17101 gtcaggaacg gtgtatcgcc gatgaagtgc catttgagat tcctcaaaat tggacttggg
    17161 tgaggttggg ggaagtaggt gattggagtt caggtgcaac tccaaaccga cacaatcctg
    17221 aatactataa tggtacgatc ccgtggctaa aaacaggaga cttaaacaac ggaataattt
    17281 catctatacc tgaatttatt acagataaag cattgcagga atgttctgta agattaaatc
    17341 ctgttggttc agttttgata gcaatgtatg gagcgacaat tggtaagctt gggatattaa
    17401 aaatagcagc aacaacaaat caggcttgct gtgcgtgtat tccttttaat ggaatttata
    17461 ataaattctt attttattat ttgatgtcgc agaaagcaga atttcagaaa aaaagtgagg
    17521 gaagtgggca accaaatata tcaaaggaaa aaattatcaa ttatttattt cctttaccac
    17581 caatccacga acaacatcgc attgttcaaa aaattgaaca attatttgca gagattgaaa
    17641 aattgtagga gtcatcatcg ctttcttggg cgtgttggat acgccctaca gtcactaaat
    17701 tattgatctt ttatcatatc ggttttcaac caacctaaaa ggaaacctat atgatccatc
    17761 tatttgaaaa gcaccttaat caatctaatc ttgctgaaaa tacccaatca gcttatcttt
    17821 ttgcggtaaa acaatatcac aaaaaatttg atcagttatc taaaatcaat ttacagcgat
    17881 ataaggtatt cttaattgaa aactataagc ctcagactgt taatttaagg ctaagagcca
    17941 taaattatta tctggaattt attaaaaaag aaaaatggaa attatccttt gttaaagttc
    18001 aacaaaaacc atttttggaa aatgtaatta gtgaagctga ttatacttat tttaaaaaat
    18061 gcctaaaaaa agataacgaa ctatactggt attttgtgat tcgttttatg gcagcaacag
    18121 gttcgagagt aagtgaatta atccagataa aatgtgaaca tattaaaata ggctatttag
    18181 acctctattc taaaggtgga aaattaagac gaatttacat cccaaaatct ctgcaaaaag
    18241 agtgttctga atggttgaga ttaaataata agcataatgg atttattttc ttaaataaat
    18301 atggtgatag aattactact cgtggcattg ccagccaatt aaaagtattt gctagacgct
    18361 ataaattaga tcctaaaatt gtttatccac attcatttcg ccatcgtttt gcaaaaagtt
    18421 ttttagaacg atttaatgat attgcttttc ttgctgattt aatggggcac gaaagcatag
    18481 aaaccacaag gatctattta cgaaaaacaa gcacagaaca gcaggaaatt gtgaataaaa
    18541 ttattgattg gtaattttta aggggcgtgt ttcacacgcc cttggacata taagtttttc
    18601 taaaatttct ctatttccga aaataatttt tcaatttttt caacgattct atgttgttca
    18661 gaaataggtg gaatagcaat taaaatagag tttaggtttc tttgatttaa tttgggtaca
    18721 gctattccgt taattaatcc catactaggt aaatttaatg catttaaata ataacaaaaa
    18781 tatttttcca aattaaaatc aactgataat acatgaacat gattatttgc ccaaaattta
    18841 ccttcaacaa taaaagcaac gtctttttta gtgaagaaat tacctccatc ttctccaatt
    18901 aaaataaact taccatcaaa aatatagctt gccactttat ctattgctcc agtcgctcca
    18961 taatagtcat acaatttatt ttgttggcta cgctgtgcaa ctgatactgg ttttcttctt
    19021 ctatcatgat ttaaagaata attttccaac ctcacccaaa tccaattttg aggaatctca
    19081 aatggcactt catcggcgat acaccgttcc tgacctgc
//
LOCUS       DANMCL010000054        18389 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.054, whole genome shotgun sequence.
ACCESSION   DANMCL010000054 DANMCL010000000
VERSION     DANMCL010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18389
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.054"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            12..242
                     /locus_tag="PXF40_001651"
     CDS             12..242
                     /locus_tag="PXF40_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802979.1"
                     /translation="MNAQATLNNHKDYILCGRKEKRTSDFINVFEVFENEATQEFVIE
                     RAMFRNGKLIDWNQSDKMNAEQAQQLWQAYIH"
     gene            624..860
                     /locus_tag="PXF40_001652"
     CDS             624..860
                     /locus_tag="PXF40_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802980.1"
                     /translation="MSNQEFVKLGSVEPSTIDELQKEDIRQAILKSVSITPYYVGLEI
                     AVCQAISAINKFSDGCITEELLDTKNGDKYRKNN"
     gene            1167..1242
                     /locus_tag="PXF40_001653"
     tRNA            1167..1242
                     /locus_tag="PXF40_001653"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1200..1202,aa:Arg,seq:tct)
     gene            1429..1935
                     /locus_tag="PXF40_001654"
     CDS             1429..1935
                     /locus_tag="PXF40_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802981.1"
                     /translation="MKTKYKIIIERAKQQGLTHIELTQKHCLYLATSVGKLCYGVANN
                     AEQHIKLAAGEIFTLLTIINHQIQFDEDLELHTWKASGTTPPEQRAIRMLHHTSQFAW
                     FAPWLVDSNEKEQNQNTIRINLFNKCSGILIELNGILKEYELTLDECLDEFLKNKHCL
                     NEFSIHKE"
     gene            1939..2298
                     /locus_tag="PXF40_001655"
     CDS             1939..2298
                     /locus_tag="PXF40_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802982.1"
                     /translation="MTTFSIYTSVWHDSSTKGFRHNIKHKRHDCWRADIRIKQKINDV
                     WVQISRIRKRFKCPEQAKSFVEQWKQIDSPAFMQHQINRQALREELSNLEQRKQKQDG
                     ILEVIEYRISQIKELLK"
     gene            2295..2774
                     /locus_tag="PXF40_001656"
     CDS             2295..2774
                     /locus_tag="PXF40_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802983.1"
                     /translation="MKRNKVESYTIRLLKNNHTKRYFGEVILNGIKEISTAEMMSEIN
                     AIKAVNKRIEALNKTKAVNLPNYPEIRGHQPIMYNYNFEQIEEDPEQVKPKPSKPKRK
                     PFIPYGLNGYFVDSNGNIRLHLDRRASAETITLETDFFNVLAEMVKRTQEANNAKHA"
     gene            2908..3120
                     /locus_tag="PXF40_001657"
     CDS             2908..3120
                     /locus_tag="PXF40_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802984.1"
                     /translation="MIGYEDYTDASLQPEEDPSEEAFILAEENIIELLENNGFETIAT
                     ILAGSDGWRNAINAYLAEQNKHRNEF"
     gene            3133..4083
                     /locus_tag="PXF40_001658"
     CDS             3133..4083
                     /locus_tag="PXF40_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802985.1"
                     /translation="MTTANQQFELILKTESRVVSTNLQTFEEQANQYLATLTTTFETD
                     DDFAKAKEEVKELESIEKKIRDAIKQTQTGEIAELVLTAEQIAERFRQERLTRDKLVK
                     SKETEIKKQIADKAIEEITDTRNKLVKVSDISLALEITMPKHGIANRIAEAQKNKRTI
                     DSLTKAVNAEKALIISEMSVEIGRLTERLEQLAAKSAYLFPDAVKLIATQDDLAPIIQ
                     QRLAEEAEREAAIKAKAEADKVQAEAKAITDKMERKQAVENPQNVAKMNIEEPAQTDG
                     PLGDFIITIRLNQTIQTNAVSIARELKAKFGDSVSLNKAK"
     gene            4124..4918
                     /gene="bet"
                     /locus_tag="PXF40_001659"
     CDS             4124..4918
                     /gene="bet"
                     /locus_tag="PXF40_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HDL5802986.1"
                     /translation="MTTALQTLTNKLAERFEMGDGSGLVETLKSSAFAGATVSDAQMI
                     ALLVIANQYQLNPWTKEIYAFPGGNGGLTPIVGVDGWVRIINREPQYDGMEFHFTDDY
                     SACTCTIYRKDRSKPIVVTEFMGECKKSSPAWNSHPKRMLRHKAMIQCARLAFGFTGI
                     YDQDEAERIAENEKPPKNITPQNNVVETTAVELISEEQLSQIRQLMQVTGTEEAKILA
                     YIGVQALNQIPKSQAEAVIKKLNLTLDKQNAEKADNGESVGEEIPL"
     gene            4915..5550
                     /locus_tag="PXF40_001660"
     CDS             4915..5550
                     /locus_tag="PXF40_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HDL5802987.1"
                     /translation="MTGDLIILDCEQGSEEWLNARLGIPTATGIENIVTPSGKKSSAW
                     NSYLAELVAESIEGAKDGFKSSDMARGNELEPLARMAYEFETDTEVVQVGGVYLNAEK
                     QLMVSPDGLIPNLKKGLEIKCPKMKTHIKYLLEGGVPNEYLIQVQSALWVTGYETWDF
                     VSYCPEYQKQPLYIYTAERDPVLMKAFDQYIPQFIKSLYALKGVTAPKGAF"
     gene            5563..5739
                     /locus_tag="PXF40_001661"
     CDS             5563..5739
                     /locus_tag="PXF40_001661"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802988.1"
                     /translation="MTTQKKYELLQNDTINHNGRTLYRIKAICHFRRTAEYSARATHA
                     TAAECYGGIACTST"
     gene            5760..6212
                     /locus_tag="PXF40_001662"
     CDS             5760..6212
                     /locus_tag="PXF40_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HDL5802989.1"
                     /translation="MKPFDLNKALAGEPVKLRNNDKAFVKYLISDDYIRDNKDHQVQG
                     YTVDEENVFLSEVSWAVSGSHFNDGTIAQYDIVGMWEEPRPAVTLTLPCPLKEPQENM
                     WFIDNDFTIVKSMFANAPFVKKFLPQGRCFASEEDAQEWLDAMRNSRR"
     gene            6290..6817
                     /locus_tag="PXF40_001663"
     CDS             6290..6817
                     /locus_tag="PXF40_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HDL5802990.1"
                     /translation="MNEEKYFSVDVSDETHVIRLHETLEQAKQSCLNGATEAYEFAGD
                     MDDHESYESYEAYDLPYAVYGVVLGRAKSDIRPLTDEERASELFGEAEQVIEPPTLLE
                     NNGWISIEDKLPPIETDVLGLCDISGMQLILIVSRELADNEWYFLSVNQYGLDDDVIA
                     VTHWQPLPEPPKEEK"
     gene            6814..7017
                     /locus_tag="PXF40_001664"
     CDS             6814..7017
                     /locus_tag="PXF40_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802991.1"
                     /translation="MTDTERLDFIAQRKLDVRYSDLVDEFIIASYTKPHEQYFHWARN
                     ADLRTAIDEAMKEMRGLNNATTN"
     gene            7001..7465
                     /locus_tag="PXF40_001665"
     CDS             7001..7465
                     /locus_tag="PXF40_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG-like family protein"
                     /protein_id="HDL5802992.1"
                     /translation="MQQLIKNIEQWAEDRNLINGSTPQKQMLKLMEEFGELCGGIARN
                     NPEMIKDAIGDLIVVCIIKAKQEKQPIYPVQFENHRLNGYRFDISVAVHCLYDIERIK
                     DRGKYSRFFGILHHLALINRFTLNDCLAHAYDQIKDRKGEMQAGIWVKEDDL"
     gene            7559..7729
                     /locus_tag="PXF40_001666"
                     /pseudo
     CDS             7559..7729
                     /locus_tag="PXF40_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            7965..8456
                     /locus_tag="PXF40_001667"
     CDS             7965..8456
                     /locus_tag="PXF40_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HDL5802993.1"
                     /translation="MQTKPILDACCGSRMFHFDKQNPLVLFADNRQIETTMKDRDKIR
                     HLEIKPDVLHDFTNMPYENESFWHIVFDPPHLVQGGENSWLVKKYGKLPCNWREVLKK
                     GFDECMRVLKPNGTLIFKWNETQIPVSEILKVIDCQPIYGHKSGRLNQTHWLAFVKIE
                     QSL"
     gene            8483..8740
                     /locus_tag="PXF40_001668"
     CDS             8483..8740
                     /locus_tag="PXF40_001668"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802994.1"
                     /translation="MEQIKLSEKAERALILSQLNENSAMIIDLDDVALILNCGYDYVQ
                     SKISKKPGFPEPVQGINGKSVLFKSGDVIRWVNRQARTRKN"
     gene            complement(8737..9726)
                     /locus_tag="PXF40_001669"
     CDS             complement(8737..9726)
                     /locus_tag="PXF40_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5802995.1"
                     /translation="MASIRKRGSKYQVEISKKGVRKSATFRTKAEAQAWAYEEERKIE
                     IISKGGVVDILFAEALERYQNEVSINKRTWRREIGRINNILKEPIANRYVQDIKRDDI
                     EDWIEARLKRGLKGSSVERDLSILSNVFTYCLKRWGYISENPMIGVIHPNKVPPRKQR
                     YSQEDIDKILEVSKYREDIKRSNARLAAAMLFAIETAMRAGEISGLTWDNVNFEKRIA
                     HLPMTKNGSSRDVPLSSKAIEILKRLETIKKDNSVFQLPQGNGLSARFFELKEKAGLS
                     YLNFHDTRREALSRLAKKVDVMTLAKISGHKDVKILLNTYYAPNMEEVAHLLD"
     gene            10199..11602
                     /gene="asnS"
                     /locus_tag="PXF40_001670"
     CDS             10199..11602
                     /gene="asnS"
                     /locus_tag="PXF40_001670"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HDL5802996.1"
                     /translation="MSKFPTVSEILSGKIAVGEEATVRGWVRTRRDSKAGLSFLSVYD
                     GSCFDPIQAIINNDLPNYNAEVLHLTAGCSVVVTGKVVESPAEGQAVELQASKVEVLG
                     WVEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHCLAQAIHRFFHEQGFYW
                     VATPVITASDTEGAGEMFRVSTLDLENLPRGENGKVDFNQDFFGKESFLTVSGQLNAE
                     TYACALSKVYTFGPTFRAENSNTTRHLAEFWMMEPEVAFADLNDNAKLAEDMLKYVFK
                     AVLAERKDDMEFFVKHVDKEAISRLENFINSPFAQVDYTDAIEILLKSGKEFEFPVSW
                     GIDLSSEHERFLAEEHFKSPVVVKNYPKDIKAFYMRLNDDGKTVAAMDVLAPGIGEII
                     GGSQREERLEVLDQRMNEMGLNPEDYWWYRDLRKYGTVPHSGFGLGFERLIVYVTGLQ
                     NIRDVIPFPRAPRNANF"
     gene            complement(11702..12694)
                     /gene="epmB"
                     /locus_tag="PXF40_001671"
     CDS             complement(11702..12694)
                     /gene="epmB"
                     /locus_tag="PXF40_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HDL5802997.1"
                     /translation="MQPIQIKPLWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKL
                     FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPLEEQQSPAPNILHKY
                     HNRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAVWQQGLTYIAEHPELEEVILSGGD
                     PLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVT
                     HINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPY
                     YLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVPKLAREIAKEPNKILKG"
     gene            complement(12748..13317)
                     /locus_tag="PXF40_001672"
     CDS             complement(12748..13317)
                     /locus_tag="PXF40_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5802998.1"
                     /translation="MKKLITLSAILAVSVATVAEAKRGGGSFRSVSPSKAVATKPVAS
                     QKSTTNQQTQQKDATFANTPNSATAQPQVRQGSTMANVAMGAAAGYILGDMMSSNAHA
                     NQPSQPADANAQAVNSAQNVANGAVPAIAEFKSIGGQIDPFLVEKTDGYRRYCISGVQ
                     YLVAAQGVQTSPTVMVNPNGTPLQCNLIP"
     gene            13484..14050
                     /gene="efp"
                     /locus_tag="PXF40_001673"
     CDS             13484..14050
                     /gene="efp"
                     /locus_tag="PXF40_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HDL5802999.1"
                     /translation="MASYSTNDFKKGLKFIQDGEPCVIVENEFVKPGKGQAFTRTKIR
                     KLISGKVLEINFKSGTSVEAADVVDSNYNYSYSDGDFWYFMHPETFEQISVDEKALGD
                     NVKWLVDNAECIVTLWNGSAIAVTPPNFVELEIVETDPGLKGDTAGTGGKPATLSTGA
                     VVNVPLFVQIGEVIRVDTRSGEYVSRVK"
     gene            complement(14117..15007)
                     /locus_tag="PXF40_001674"
     CDS             complement(14117..15007)
                     /locus_tag="PXF40_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5803000.1"
                     /translation="MKENLNDLRAFLLVAQTSSFTKAAAQMGVSQSALSHSIRGIEER
                     LQIKLFHRTTRSISTTEAGERLYQRLLPLFDEIDQEVNGLSEFRNALKGGLRINGNEH
                     VFRDVLADKFAEFVKRYPEVALELVAEDRFVDIVAERFDAGIRLGADVAKDMIALRIS
                     PDVKMTAAASPNYLAQHGTPKTPFDLTEHHCLKHRLATLGGILAWEFRDPITKKIVKF
                     QPQGNLTANNGFLLQHYAKQGLGILWSPQDSIQTELDNGSLVPILTDWAMQYEGYHLY
                     YPNRRQNSPLLKALIDVLRG"
     gene            15114..15689
                     /locus_tag="PXF40_001675"
     CDS             15114..15689
                     /locus_tag="PXF40_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HDL5803001.1"
                     /translation="MKQILILGASGSLANVVIPELLKDNNVQLTLFARRPQSVAKFET
                     ERVKIVQGDVLDFHALTQAMQGVDAVYAGLAGDLKAMAGNVVNAMNEAQVKRLVWISS
                     MGIYGETGEDHGAILEPYRQSAAVIEASELDYTVVRPGWFTNGSEVQYQLTHKGEPFK
                     GHSVSRKSIADFVARILRENSEIRESVGIAA"
     gene            15740..16183
                     /locus_tag="PXF40_001676"
     CDS             15740..16183
                     /locus_tag="PXF40_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5803002.1"
                     /translation="MNLQQIQDRLALKDLVDTFSNLADEKKVAEQMPLFTQDAVVNTY
                     IGGKLVFEMHGVAEIEQVFTTFLTPFHSVYHLNGQHTVPFIDENNATAINYCAVKLVE
                     TKEGKEILHDHSVRYADTYVKQEGKWRIAKRIANFMISESREIRQ"
     gene            16344..18014
                     /gene="glnS"
                     /locus_tag="PXF40_001677"
     CDS             16344..18014
                     /gene="glnS"
                     /locus_tag="PXF40_001677"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HDL5803003.1"
                     /translation="MSEEILTAETGTRANFITHIIDEDLASGKHNNVYTRFPPEPNGY
                     LHIGHAKSICLNFGIAQDYNGLCNLRFDDTNPVKEDVEYVDSIKQDVEWLGFKWEGEP
                     RYASDYFDQLYGYAIELINKGLAYVDELSPDEMREYRGTLTEPGKNSPYRDRSVEENL
                     ALFEKMKNGEFAEGKACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGDKWCIYPMYD
                     FTHCISDAIERITHSLCTLEFQDNRRLYDWVLDNISIERPLPHQYEFSRLNLEGTLTS
                     KRKLLKLVTDGIVDGWNDPRMPTISGLRRRGYTPASLREFCRRIGVTKQDNVVEYSAL
                     EACIREDLNENAPRAMAVINPVRVVIENFGEKEILKAPNHPNRPELGERDLPFTREIY
                     IDEADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDASGRISTIFCTYDPDTLGK
                     NPADGRKVKGVIHWVSAEDNKPAEFRIYDRLFTVPNPGAEEDINAVLNPESLVVKHGF
                     VESSLAHAKPEQDYQFEREGYYCLDSKDGSADNLVFNLTVSLKESVAF"
BASE COUNT         5849 a         3782 c         3826 g         4932 t
ORIGIN      
        1 aggaaaccaa aatgaacgca caagcaacgc taaataacca caaagactac attttatgcg
       61 gacgcaaaga aaaacgcacc agtgatttca tcaatgtgtt tgaggtcttt gaaaatgaag
      121 ccacgcaaga gtttgtgatt gaaagagcaa tgttcagaaa tggcaagtta atcgactgga
      181 accaaagcga caaaatgaac gccgagcaag ctcaacaact ttggcaagcc tacattcact
      241 aagaattttt atcaaagccc ttcacggagg gcttgaataa aggttctaaa cctcgccgaa
      301 aggcattgtt ctttaaaaat taaaccaaaa acacatcacg acaagcggat tacttagcaa
      361 tgtaatgaca ttggagagac agaaccaatc tttgcataaa gcggtaaaac gtatgcggta
      421 aatgaactta taggcaagtt gtgaaactct ctaagctact cggactgaaa gaatagtacg
      481 gtagttgtgg cgaatttact ggtgatgtgc gaactagcgg aaaggttaag cactggcagt
      541 gaatcgggaa gcacaaacgc tggttcaatt ccaaagcata tttgagaaag tgtgctttgg
      601 aatattaata acaggagaac aaaatgagta atcaggaatt tgttaaatta ggcagcgttg
      661 aaccttcaac gattgatgaa ttacagaaag aagatattag gcaggcaata ttaaaatccg
      721 tctctataac gccatattat gtggggctgg aaatagcggt ttgccaagca atatcagcca
      781 tcaataaatt tagtgatggc tgtattacag aagagctttt agatacgaaa aatggtgata
      841 aataccgaaa aaataactaa tcaataacac caaagtgatt tcattttttc ggcattagcc
      901 ctagatgttg cccaagtatt atattcctcg aagttgtggc aaacaagagg acttggcccg
      961 gtggctcaca agtataaaaa agagccacca tctctaacag ctctcaacag agagtgagac
     1021 aaataacccc gttttagttt taatgttttc taaagtcggc gttaggcagc gaaacgaatg
     1081 tactagagag ttgttagaga tggttagtcc atcacattcc ttagattgaa gtaagccctg
     1141 ccgttggggt taagcaacgg tactttgacc gcatagttca gtggatagag cagctgcctt
     1201 ctaagcagtg ggtcgagagt tcgaatctct ctgcggtcgc catccaaaac cgctttacgc
     1261 acatcatcga tgacgagcct acgaagtgga aacctaccgt gtagagcggt tttgaatggc
     1321 taagttgtgt aactgctaca acttaaaaag agcggttgat aataaacata atgactccgt
     1381 ttccccgcct cgtgcggggc tttttttatc cacataaaag gattcaaaat gaaaactaaa
     1441 tacaaaatta ttattgagcg agcaaaacaa cagggtttga cccatattga gcttactcaa
     1501 aaacattgtc tgtatctcgc tacatcagta gggaaactgt gctacggggt agctaataat
     1561 gcagaacaac atattaaact tgctgctgga gagattttta cactactaac gatcattaac
     1621 catcaaatcc agttcgatga agacttagag cttcacacgt ggaaagctag tggaacaacc
     1681 ccacccgagc aaagagcgat acgtatgtta catcatacct cgcaatttgc ttggtttgct
     1741 ccttggttag tggacagcaa tgaaaaagaa caaaaccaaa atacaatcag gattaattta
     1801 tttaacaaat gctctgggat tctgattgaa ctaaatggca ttcttaaaga atacgagcta
     1861 actcttgatg agtgcttaga tgaattcttg aaaaataagc attgtttgaa tgaatttagt
     1921 attcacaagg agtaaaaaat gacgacgttt agtatttata ccagtgtatg gcacgacagc
     1981 tccacgaaag gctttcgcca caacattaag cataaacgcc acgattgctg gagagcggat
     2041 atccgcataa agcaaaaaat caatgatgtg tgggtgcaga tttcaaggat acgcaaacgc
     2101 ttcaagtgcc ctgaacaggc aaaatccttt gtagaacaat ggaaacaaat tgattcacct
     2161 gcatttatgc aacaccaaat caaccgccaa gcattaagag aagaattatc aaaccttgag
     2221 caacgcaaac agaagcaaga cggaatactt gaggtgattg agtatcgtat tagccaaatc
     2281 aaggagttgc tgaaatgaaa cgcaataaag tagaaagcta tactatccgc ttattaaaaa
     2341 ataatcatac aaaacgctac ttcggagaag ttatattaaa cggcataaaa gaaatcagca
     2401 cggcagagat gatgtctgaa attaacgcta ttaaggcagt aaataagcgc attgaagctc
     2461 tgaataaaac caaagccgtt aatttgccta attatcctga aatccggggt catcagccta
     2521 ttatgtacaa ttacaatttt gaacaaattg aggaagatcc tgaacaggtt aagcctaaac
     2581 catcaaaacc aaaacgcaag ccattcatac cttatgggct aaacggctac tttgtggata
     2641 gcaacggtaa tattcgctta catctagaca gacgagcaag tgccgaaaca attacccttg
     2701 aaactgattt cttcaacgtt cttgccgaaa tggtaaaacg tacacaagag gcaaacaatg
     2761 ctaaacatgc ttagacaatg gattaaatac ggcttatacg ccctgctttt tatggttgcc
     2821 atcaccctcc taatgcaatg aagagcttat ccctgaaagc acctgcaagc ctgaaacttg
     2881 cgaatttaaa gtaacggaga aagtgtgatg ataggatacg aagactacac agatgcttca
     2941 cttcaaccag aagaagaccc tagcgaagag gctttcatct tggctgaaga aaacatcatc
     3001 gagctattag aaaacaacgg ctttgaaacc attgccacca tcctagccgg ttctgatggc
     3061 tggcgtaacg caatcaacgc ctacctagcc gaacagaaca aacacagaaa tgaattttag
     3121 aggaataaga aaatgacaac tgcaaatcaa caatttgaac ttattttaaa aaccgaaagc
     3181 cgagtggttt ctaccaactt gcaaactttt gaagagcaag caaatcaata ccttgccacg
     3241 ctcaccacca cctttgaaac cgatgatgat tttgcaaaag caaaagaaga agtgaaggag
     3301 cttgaaagca ttgagaaaaa aattcgtgac gcaattaaac aaacgcaaac tggcgagatt
     3361 gcggaattgg tattaacagc agaacaaatc gctgaacgtt tccgccaaga gcgattaacc
     3421 cgagacaagc tcgttaagag caaagaaacg gaaatcaaaa aacagattgc cgataaagcc
     3481 attgaagaaa tcactgatac cagaaacaag ctggttaaag taagtgatat ttcccttgcc
     3541 ttagaaatca caatgccaaa acacggcatt gctaatcgta ttgccgaggc acagaaaaat
     3601 aaacgcacga ttgacagctt aaccaaagcc gtgaacgccg aaaaagcgct gattatcagc
     3661 gaaatgtcgg tagaaatcgg gcgcttgact gagcgattag aacagcttgc tgcaaaatca
     3721 gcttatcttt ttcctgatgc agtgaaattg atcgcaaccc aagacgacct cgccccaatt
     3781 attcaacaac gccttgccga agaagccgag cgtgaggcgg cgattaaagc caaagcagaa
     3841 gccgacaaag tacaagccga agccaaagcg attactgata aaatggagcg caaacaagcg
     3901 gtcgaaaatc cgcaaaatgt ggcaaaaatg aacatcgaag aaccggcaca aaccgatggg
     3961 ccattaggcg attttatcat tactattcgc ttaaaccaaa caatccaaac caacgcagtc
     4021 agtattgctc gtgagctgaa agcgaaattt ggggatagcg tttcgctcaa taaggctaaa
     4081 tgatttgata ccgcacaaat tcaacctaaa taaggatcat attatgacaa ctgcattaca
     4141 aacactaacc aacaaacttg ccgagcgttt tgaaatggga gatggctcag gattagttga
     4201 gacacttaaa tcgtctgctt tcgcaggggc aaccgtaagc gatgctcaaa tgattgcact
     4261 attggttatt gctaaccaat accaattaaa cccttggaca aaagaaattt atgcattccc
     4321 cggtgggaac ggtggattaa cgcctattgt cggcgttgat ggttgggttc gcattattaa
     4381 ccgtgagcct caatatgatg gaatggaatt tcattttacc gatgactatt ccgcctgtac
     4441 ttgtactatc taccgtaaag atagaagtaa accgattgtg gtgacggaat ttatggggga
     4501 atgtaaaaag agctctccag cttggaactc tcacccaaaa agaatgttac gccataaagc
     4561 aatgatccaa tgtgcaagat tagcctttgg ctttacgggt atttacgacc aagacgaagc
     4621 agagcgtatt gcggaaaatg aaaaaccacc taaaaacatc acaccacaaa ataacgtggt
     4681 agaaaccact gccgttgaac tcatttcgga agaacaactg tcgcaaatcc ggcagttaat
     4741 gcaagtaacc ggtacggagg aggcgaaaat tctcgcctat attggcgttc aagcactgaa
     4801 ccaaatccct aaatcgcagg cagaggcagt gattaaaaag ctcaatctta cgctagacaa
     4861 gcaaaacgct gaaaaggcgg ataatggcga aagtgtcggt gaggaaatcc cactatgaca
     4921 ggcgatttaa tcattttaga ttgcgaacaa ggatcagaag aatggctcaa tgccagattg
     4981 ggcattccca ccgccacagg cattgaaaat atcgttacgc caagcggtaa aaaatcgtcc
     5041 gcttggaata gctatcttgc cgaactggtt gccgaaagca ttgagggagc aaaagacggt
     5101 tttaagtcgt ctgatatggc acgaggcaac gagcttgaac cgcttgcacg aatggcttac
     5161 gagtttgaaa ccgacaccga agtcgtgcaa gtcggcggtg tgtaccttaa cgccgaaaaa
     5221 cagttaatgg taagtcctga cggcttaatt cccaatctaa aaaaagggtt ggaaatcaaa
     5281 tgcccgaaaa tgaaaaccca catcaaatac ctgctagaag gcggtgtgcc gaatgaatat
     5341 cttattcaag tgcaatctgc cctttgggta acaggctacg aaacgtggga ctttgtcagc
     5401 tactgccccg aataccaaaa acaaccgctt tacatctaca cagccgaacg tgatccggta
     5461 ttgatgaaag cctttgatca atatatcccg caatttatca aatcccttta tgcattgaag
     5521 ggggtaaccg ccccgaaagg ggctttttaa taggtagcca atatgacaac ccaaaagaaa
     5581 tacgaactac tccaaaacga cacaatcaac cacaacggca gaacactcta ccgcatcaaa
     5641 gccatatgcc actttaggcg gacggctgaa tattccgcaa gagccactca cgccacagcc
     5701 gctgaatgct atggtggaat tgcctgtaca tcaacataac cacaaacacg gagaataaaa
     5761 tgaaaccatt tgatttaaat aaagcattgg caggtgagcc agtaaaacta agaaataatg
     5821 ataaggcatt tgtaaaatac ctaattagtg atgactatat tagagataat aaagaccacc
     5881 aagtacaagg gtatacagtt gatgaagaaa atgtattttt gtcagaagta tcgtgggctg
     5941 ttagcggatc tcatttcaat gatggaacaa tagctcaata tgatattgtt ggtatgtggg
     6001 aagaaccaag accagcagta acattgacgt taccttgccc attaaaagaa cctcaagaaa
     6061 atatgtggtt tattgacaat gattttacca tagtaaaatc tatgttcgca aatgccccct
     6121 ttgtaaaaaa attcttgcca caagggcgat gtttcgcttc agaagaagac gctcaagaat
     6181 ggttagatgc aatgcgaaat agtcgtaggt aaatcggcag cactaacagc tgaatgctgc
     6241 tgttgaattt cttgtatatc cacataaaca cggaacgcgg agaaagaaaa tgaatgaaga
     6301 aaaatatttt tcggtcgatg tctcggatga gacacatgta ataaggttgc acgaaacatt
     6361 agagcaagca aaacaaagct gtttaaatgg tgctactgaa gcctatgagt ttgcgggtga
     6421 catggatgat cacgaaagct atgaaagcta tgaagcctat gatttaccct atgcagttta
     6481 tggtgttgtt ttaggtagag caaaatcaga tattcgtcca ctaacagacg aagaaagagc
     6541 atcggagtta tttggggaag ctgaacaagt tattgaacca ccaacacttt tagaaaacaa
     6601 cggctggatt tccattgagg acaaattacc acctattgaa acggatgtgc tagggttatg
     6661 cgatatttca ggaatgcagt taattttaat agtttcaaga gaacttgccg ataacgagtg
     6721 gtattttctt agtgtaaatc aatatgggct tgatgacgat gtgattgcag taacccactg
     6781 gcaaccactt cccgaaccac caaaggagga aaaatgaccg acaccgaacg cttagacttt
     6841 atcgcccaac gcaaattaga tgtccgatat tctgatttgg tggacgaatt tattattgct
     6901 agctatacca aaccgcacga gcagtatttt cattgggcaa gaaatgccga tttacgcacg
     6961 gcgattgatg aagcaatgaa agaaatgaga ggactaaaca atgcaacaac taattaaaaa
     7021 catcgaacaa tgggcggaag accgcaattt aattaacggc tcaaccccac aaaagcaaat
     7081 gctcaaactg atggaagagt ttggcgaact ctgcggaggc attgcccgca ataatcctga
     7141 aatgattaaa gatgcgattg gggatttgat tgttgtctgt attattaaag caaaacaaga
     7201 aaaacaacct atttaccctg tacaatttga aaatcataga ttaaatggtt acagatttga
     7261 tatttcggtc gctgttcatt gtctatatga tattgaacgc attaaagaca gaggtaaata
     7321 tagccgtttt tttggcatat tacaccattt agccttaata aatagattta cgcttaatga
     7381 ctgcctcgct cacgcctacg accaaatcaa agatcgcaag ggcgaaatgc aagctgggat
     7441 ttgggttaaa gaagacgatt tatagtacct aagctataaa aaccgaaaca tcttgcagaa
     7501 aagcattccg ccactctata agagtttcgg tttcttcttc gttggcgttg attatgttta
     7561 cacgcacgct accgagtatc aaaccacgct tggcgtaatg aagcggatac ttgaaccgat
     7621 gttagccgac ttcgaggtcg atccgtttga agaggctcac taccacaaag ccctaactac
     7681 cttaaggcaa taccagccga aaggcttagg cggcttagtc cgaatttaat ttgcaaaaaa
     7741 atcacacaat ccgaccgctt gtgaaacaac aagcggcgga tttccatacc caaattttga
     7801 ggacaagccg atgaaatacg caaaaatcat tctattttta accgcctttg cagttgctgc
     7861 tgaccatcta gagttacgca acgactgcga tggcaaaatt tgtatggctc aacgctaatt
     7921 aacccaaccg cttgttccgc aagcggttat tttttggagg aaaaatgcaa acaaaaccga
     7981 tattagatgc gtgttgtggt tcccgtatgt ttcattttga caagcaaaat ccactcgtcc
     8041 tgtttgctga taatcgacaa atagaaacca caatgaaaga ccgagacaaa atccgccatt
     8101 tagaaatcaa acctgatgtt ttacacgatt tcacgaatat gccatacgaa aacgagagtt
     8161 tttggcacat tgtttttgat ccgccacatt tagttcaagg tggagaaaat agctggcttg
     8221 taaagaaata cggcaaatta ccttgcaact ggcgagaagt cttgaagaaa ggctttgacg
     8281 aatgtatgcg agtgctaaaa ccaaacggca cgcttatttt caagtggaat gaaacacaaa
     8341 tccccgtttc agaaatttta aaagttattg attgtcagcc gatttatgga cacaaaagcg
     8401 gacgcttaaa ccaaacacat tggctggcgt ttgtgaaaat tgagcaatcc ctctaaatga
     8461 ggggtttatt tttggagaga atatggaaca aattaaactt tcagaaaaag cggagagagc
     8521 cttaattctt tctcagctca acgaaaattc agcaatgatt attgatttag atgatgttgc
     8581 cctgattttg aattgcggat atgactatgt gcaatccaag atcagtaaaa agcccggttt
     8641 cccagagcca gtgcaaggca ttaacgggaa atcagttctt ttcaaaagtg gcgatgttat
     8701 ccgttgggtc aaccgtcaag cacgaacacg caaaaattaa tccagcaaat gagcgacttc
     8761 ttccatattt ggggcgtagt aagtgttaag caaaatcttc acatctttat gccctgaaat
     8821 tttggctaag gtcatcacat cgactttttt tgccaagcgt gaaagagcct ctctcctcgt
     8881 gtcgtgaaaa ttcaaataag aaagcccagc cttttctttt aactcaaaga atctagcact
     8941 taaaccattc ccttgtggaa gctgaaaaac ggaattatcc tttttgatgg tttccagtct
     9001 tttcaagatc tcgattgcct ttgatgataa cggaacgtct cttgatgaac cgttttttgt
     9061 cataggcaaa tgagctattc ttttctcaaa attcacatta tcccacgtta aacccgaaat
     9121 ctcaccggca cgcattgccg tttcaatcgc aaataacata gccgcagcca atcgagcatt
     9181 agagcgttta atatcttctc ggtatttgct gacttctaag attttatcaa tatcttcctg
     9241 ggaataacgc tgttttcttg gtggcacttt gtttgggtga ataacaccga tcatcggatt
     9301 ttcactaata tagccccagc gttttaagca gtaggtaaat acattgctta aaatagacaa
     9361 atccctctca acacttgagc cttttaaccc tctcttcaat ctagcttcga tccaatcttc
     9421 aatatcatct cgcttaatat cttgtacata acgattcgca ataggctctt tcaatatgtt
     9481 attgattcga cctatctctc gtcgccacgt cctcttatta atcgatactt cattttgata
     9541 ccgctctaac gcttccgcaa ataaaatatc aactacccca cctttcgaga tgatctctat
     9601 tttacgctct tcttcgtaag cccatgcctg tgcctctgct tttgtgcgga aggtagctga
     9661 ttttctcacc cctttcttcg agatttcgac ttgatattta ctgccccgct tgcgaatgct
     9721 cgccatattt ttacctgcct tttgtcgtaa atttgtcgta atttatacca tacaataacc
     9781 gacaataaca gataataacc gattttatga aatcatctta aggcaaagaa gagaggaaaa
     9841 acttaagata acctattgaa ataactataa taaacgataa taaccgacaa aaaacggaaa
     9901 taaaaaaaag cccctaatca aaaaagcgaa aaggggcgga agtcttacct aaggaaatat
     9961 gaaaaaaact tgcataaatc tgttacatat actcagactg cctaactgaa cgaaagttca
    10021 ttaaaaaata aaaaattttt taacaccaag caaaatcaga tttaactact tgcaatgctt
    10081 atatagactc acaaatttgc aaataattcc gtaaaattat tatatttccc cctattttct
    10141 tgtagaatac ggaacgtttc ttatattaaa actcacaaca aagaatttga ggtattcaat
    10201 gtctaaattt ccaacagttt cggaaatcct atccggcaag atagcggtag gtgaagaagc
    10261 gacagtgcgt ggttgggtgc gtacccgccg tgattcaaaa gccggtttat ctttcttgag
    10321 cgtttacgat ggttcttgct ttgacccaat tcaagcgatt attaataacg atctaccaaa
    10381 ttataatgcc gaagtattac atttaaccgc aggttgctct gtggtggtga ccggtaaagt
    10441 tgtggaatcc cctgctgaag gtcaagccgt tgaattacaa gcaagtaaag tggaagtgct
    10501 tggttgggtg gaagatcctg atacctaccc aatggcagcg aaacgccact ctatcgaata
    10561 tctgcgtgaa gtcgctcact tacgccctcg tacgaactta atcggtgcag ttgctcgtgt
    10621 tcgtcactgt ttagctcaag ctatccaccg tttcttccac gagcaaggtt tctattgggt
    10681 agcaacacct gtaattaccg cctcagatac tgaaggtgca ggtgaaatgt tccgtgtttc
    10741 tacgctggat ttagaaaatc tacctcgtgg cgaaaacggc aaagtggatt ttaaccaaga
    10801 tttcttcggt aaagaatcgt tcttaaccgt atccggccag ttaaatgcgg aaacctatgc
    10861 gtgtgcctta agtaaagttt atactttcgg tccgacattc cgtgcagaaa actcaaacac
    10921 aactcgccat cttgcagaat tctggatgat ggagccggaa gttgcctttg ccgacttaaa
    10981 cgacaatgca aaattagccg aagatatgct gaaatatgtg tttaaagcgg tgcttgcaga
    11041 acgtaaagat gatatggaat ttttcgttaa acacgttgat aaagaagcga ttagtcgttt
    11101 agaaaacttt atcaattcgc catttgctca agtagattac accgatgcga ttgagatctt
    11161 attgaaatcc ggcaaagaat ttgaattccc ggtgtcttgg ggaatcgatc tttcctctga
    11221 acacgagcgt ttcttagccg aagaacactt taaatcgccg gtggtcgtga aaaactatcc
    11281 aaaagacatt aaagccttct atatgcgttt aaatgatgac ggcaaaacgg ttgccgcaat
    11341 ggacgtttta gctccgggaa tcggtgaaat tatcggtggt tctcaacgtg aagaacgttt
    11401 agaagtgtta gatcagcgta tgaatgaaat gggcttaaac cctgaagatt actggtggta
    11461 tcgtgatttg cgtaaatacg gtacagtgcc acactcaggt ttcggtttag gtttcgagcg
    11521 tttaatcgtg tatgtaaccg ggttacaaaa cattcgtgat gtaatcccat tcccacgtgc
    11581 tccacgcaat gcgaacttct aatttgcaaa aaagtaagag aatttaaccg cttgcaacaa
    11641 gcggttaaaa aaggcgaaaa ttttaccatt ttcgcctttt gtttcttgat ttctgtttaa
    11701 gctaaccttt caaaatttta tttggctctt tcgctatttc tcttgccagc tttggcacaa
    11761 gatagcctga agtgatacgc tgtaattctc ggtaaatctc accagcctgt tcatcttcaa
    11821 tatagaaatg gctcgcccct gccactttat caaataaatg caaatagtaa ggcaaaatcc
    11881 catattcaaa aagtttatca cttaaccttt ttaaggtttg agcattatcg tttacacctt
    11941 ttaacatcac cgattgattc agcaatacaa cgccggcttt tttcagttga gccattttgt
    12001 ttgcaaaaac agcatcaatt tcattggcgt gattaatatg ggtaaccaac acgacattca
    12061 agcgagattt tgataaccgt tcacataatt ctgtcgtaat tcgattggga ataacgaccg
    12121 gcaagcgtga atgaatacgc agggttttga tatgcgaaat ctgctctaat tgcgttaata
    12181 tccaatctaa gtcctgatct tttgccatca gcggatcacc accggacaga atcacttcct
    12241 ccagctcggg atgctcagca atataagtta gtccctgttg ccacacagct ttaccgcttt
    12301 tcacttcctc ataagggaaa tgacggcgaa aacagtaacg gcagttaatc gcacaactgt
    12361 tttttagcat aaataacaaa cggttatggt atttatgtaa aatattcggt gctgggcttt
    12421 gttgctcttc caatggatct accacaaacc cttctgcctc aataaattcc gcctgtaaag
    12481 acattgcttg caaaaaaagc ggatcgtttg ggttaccctt ttccattttt tcggcgaaca
    12541 ttcttggcac tcgaagagca aataatttac gggcagctat atcgccctca aaatcatttg
    12601 gattgagttc aagaaattgt aataagtcga tagggttatt aaaggcttga gccagctcgg
    12661 ttagccaaag cggtttgatt tgaattggtt gcattgaata ttgtagatac aaggggcagg
    12721 tttttgcctg cccgcaaata aaaataatta tggaattaag ttacattgta atggcgtgcc
    12781 atttggatta accattacag ttggtgaggt ttgtacacct tgtgcagcga ctaggtattg
    12841 cacgcctgaa atacaataac ggcgataacc atcggttttt tctactaaaa acggatcgat
    12901 ttgaccgcca atactcttaa attctgcaat agcaggaact gctccatttg caacattttg
    12961 tgcagaattg accgcttgtg catttgcatc cgcaggctgg ctaggctgat ttgcatgtgc
    13021 atttgatgac atcatatcac ctaaaatata accggctgct gcccccatcg ctacatttgc
    13081 catcgtgctg ccttgacgca cttgtggctg ggcagttgca ctgtttggcg tattggcaaa
    13141 agtagcatct ttttgttgcg tttgctgatt tgtggttgat ttttgagaag ctaccggctt
    13201 agttgctacc gcttttgacg ggctaactga acggaagctc ccaccgccac gttttgcctc
    13261 tgccacggtt gcaacagaaa cggctaaaat cgcagaaaga gtaatcagtt ttttcattcg
    13321 cattccttat caataaagtt tgaaaaatta tagcaaaaat cgcaagagat ctttcgctaa
    13381 ttttgtgaat ttaggttatt atatggctct ttttgacaaa cccaataggg ttgggttcaa
    13441 aatttgttaa tttattgtta ttttttaaat aattgaggaa ataatggcta gctacagcac
    13501 taacgacttt aaaaaaggtt taaaatttat tcaagatggc gaaccttgtg taattgttga
    13561 aaacgaattc gtaaaaccgg gtaaaggtca agcatttacc cgtactaaaa tccgtaaatt
    13621 aatctctggc aaagtattag agatcaactt caaatcaggc acttcggttg aagcagcaga
    13681 tgtagtagat tctaactaca actactctta cagcgatggt gatttctggt actttatgca
    13741 ccctgaaacc tttgaacaaa tctcggtaga tgaaaaagcg ttaggcgaca acgtaaaatg
    13801 gttagttgat aatgcagaat gtatcgtgac tttatggaac ggttcagcaa ttgcagtcac
    13861 accaccaaac ttcgttgagt tagaaatcgt cgaaaccgac ccgggcttaa aaggcgatac
    13921 tgcaggtaca ggcggtaaac cggcaacatt aagcaccggt gctgtggtaa acgtgccttt
    13981 attcgttcaa atcggtgaag ttatccgtgt ggatacccgt tcaggcgaat atgtttctcg
    14041 tgtgaaataa tttagcttct ctacaagtgg tcgttttttg gtcaattttt tgctaaaaac
    14101 gaccgctcat ttttacctat cctctcagca catcaattaa cgctttcagc aaaggcgaat
    14161 tttggcgacg gttggggtaa tagagatgat agccctcata ctgcattgcc cagtcggtta
    14221 aaatcggcac gaggctgccg ttatccagct cggtttgaat gctgtcttgc ggactccaaa
    14281 gaatgcctaa accttgtttg gcatagtgtt gcagcaagaa gccgttattg gcagtaagat
    14341 tgccctgcgg ttgaaattta acgattttct tggtgatggg atcccgaaat tcccacgcca
    14401 gaatgccgcc caatgtcgca agacgatgtt tgagacaatg atgttcggtt aaatcaaagg
    14461 gcgttttcgg cgtgccgtgc tgtgccaaat agttggggct ggcagctgcg gtcattttca
    14521 catcgggcga aatgcgtagt gcaatcatat ctttcgccac atctgcccca agccgaatac
    14581 cggcatcaaa acgctcggcg acaatatcta caaagcgatc ttccgccact agctccaatg
    14641 ctacttcagg gtaacgtttg acaaactcag cgaatttatc tgccagcaca tcacggaaaa
    14701 cgtgttcatt accgttaatt ctcagcccgc cttttaacgc attgcgaaac tcactcagcc
    14761 catttacttc ttggtcgatt tcatcaaaca gcggtaacag ccgttgatac agcctctccc
    14821 ctgcctcggt ggttgaaatg ctacgagtgg tgcgatgaaa cagcttgatt tgcaaccgtt
    14881 cttcaatccc ccgaatgctg tgcgacaacg ccgactgcga cacgcccatc tgtgctgctg
    14941 ctttggtaaa actgctcgtt tgtgctacca acaaaaaagc tcttaaatcg ttgaggtttt
    15001 ctttcattta accaccttat taatgaattt ttctcattac ttcaagcgat tttaccctac
    15061 taatcaaatg caatctacac cgctatactg acttcattca atggagaaca gcaatgaaac
    15121 agatcttaat tttaggagca agcggtagcc tagcgaatgt cgtgattcct gaactgctaa
    15181 aagacaataa tgtgcaatta accctttttg cccgtcgtcc gcaatcagta gcgaaatttg
    15241 aaactgaacg cgtcaaaatt gtgcaaggcg atgtgttgga tttccacgca ttaacccaag
    15301 caatgcaagg cgttgatgcc gtttacgctg gacttgccgg cgacttaaaa gcgatggcgg
    15361 gaaatgtggt gaacgcaatg aatgaagctc aggtaaaacg cttggtttgg attagctcaa
    15421 tggggattta tggcgaaacc ggcgaagatc acggggcaat tttagagcct taccgccaat
    15481 cggcagccgt gattgaagcc agcgagttgg attataccgt tgtccgcccg ggctggttta
    15541 ccaacggttc ggaagtgcaa tatcagctga ctcacaaagg cgaaccgttc aaaggacaca
    15601 gcgtttcccg caaatccatt gccgattttg tggctcgcat tttgcgtgaa aacagcgaaa
    15661 tccgtgaaag tgttggtatt gcagcctaac aagcggtgaa aaaccaaaga aaatttgcaa
    15721 aaatcagaag gaaaacacaa tgaacttaca acaaatccaa gatcgtttag cactaaaaga
    15781 tttagtagat acattctcta accttgccga tgaaaaaaag gttgccgagc agatgccgct
    15841 tttcacgcaa gatgccgtcg taaacaccta catcggcgga aaattggtgt ttgaaatgca
    15901 cggcgtggca gaaatcgaac aggtgtttac caccttttta accccgtttc acagcgttta
    15961 tcatttaaac ggtcagcata ccgtgccttt tattgatgaa aataacgcca cagcgatcaa
    16021 ctattgtgcg gtgaaactgg tagaaaccaa agagggcaaa gagatcttgc acgatcacag
    16081 cgtgcgttat gccgatacct atgttaaaca agagggtaaa tggcggattg ccaaacggat
    16141 tgcgaatttt atgatcagcg aaagccgtga aatcaggcaa taacaagcgg ttaaatttag
    16201 ctaaaaattt gcaattccat tgcatcttac taaaacagca aaattctttg gaggaaaccg
    16261 aggaattttg ctttagtctt taagtctgtt tcaattaagt gtagaataat ccgttatttt
    16321 tattgataca tttagagaga actatgagcg aagaaatttt aacggcagaa actggcactc
    16381 gagccaattt tattacccat attattgatg aagatttagc aagcggaaag cacaacaatg
    16441 tttacactcg ttttccacct gaaccaaacg gttatttgca tatcggacac gctaaatcta
    16501 tctgtttaaa ttttggtatc gctcaagatt ataacggttt atgtaacttg cgttttgatg
    16561 ataccaaccc ggttaaagaa gacgtggaat atgtagattc aattaagcaa gatgtggagt
    16621 ggctaggttt taaatgggag ggtgagcctc gttatgcctc agactatttt gaccagcttt
    16681 atggctatgc gattgagtta atcaacaaag gattagccta tgttgatgaa ttatcgcctg
    16741 atgaaatgcg tgaataccgt ggtactttaa ccgagccggg caaaaacagc ccttaccgtg
    16801 atcgtagcgt ggaagaaaac ttagcgttat tcgaaaaaat gaaaaacgga gagtttgcgg
    16861 aagggaaagc ctgcttgaga gcaaaaattg atatggcgtc cccgtttatt gtgatgcgag
    16921 atccggtgct ttaccgtgtg aaatttgctc accatcatca aaccggtgat aaatggtgca
    16981 tctacccgat gtacgatttt acccactgca tttccgatgc gattgagcga atcactcact
    17041 cgctatgtac gctagagttc caagataacc gccgcttata tgattgggtg ctggacaata
    17101 tttcgattga aagaccgtta ccgcaccaat acgaattttc acgtttaaat ttagaaggta
    17161 ctttaacctc taagcgtaaa ttattaaaat tagtcacaga cggcattgtt gatggttgga
    17221 atgaccctcg tatgccaacc atttccggct tacgccgccg tggttatacc ccagcgtctt
    17281 tacgtgaatt ttgtcgccgt attggggtaa ccaagcaaga taacgtggtg gaatactctg
    17341 cccttgaagc gtgcattcgt gaagacttaa atgaaaacgc accacgcgcg atggcggtga
    17401 ttaacccggt tcgagtggtg attgaaaact tcggtgaaaa ggaaatatta aaagccccta
    17461 atcacccaaa tcgtccagag cttggcgagc gtgatttacc gttcacccgt gagatttata
    17521 ttgatgaagc cgacttccgt gaagaagcca ataagcaata taaacgttta gtcttaggca
    17581 aagaagttcg tttacgcaat gcctatgtga ttaaagctga gcgtgtggaa aaagatgcaa
    17641 gcggtcgaat ttcaactatt ttttgcacat acgacccgga tacattgggc aaaaatccgg
    17701 ctgatggtcg caaagtaaaa ggcgtgattc attgggtatc tgctgaagat aacaaaccgg
    17761 cagagttccg catttacgac cgcctattta cagtaccaaa cccgggggcg gaagaagaca
    17821 tcaatgcggt gctaaatcct gaatcattag tggttaagca tggttttgtt gagtcaagtt
    17881 tagctcacgc caaaccggaa caagactacc aattcgagcg tgaaggttac tactgcttag
    17941 acagcaaaga tggttcggca gacaaccttg tatttaactt aactgtcagc ttaaaagaaa
    18001 gcgtagcgtt ctaatctaac tctcttcatt caaataccag caaatatgct ggtatttttt
    18061 tactctcaaa acgactcatc aagcataaaa aaagccccaa ttcttggggc cactcggaaa
    18121 gcaaatttat gtgttaggtt gctaggtaca acacttattc ttgttacctt aaggttaagc
    18181 gaatttgccg gcagtttcaa acaaaatctc tcaaaaatac agaccaatgt ttaaatttgt
    18241 gatctcagtc acaaaatcca ctttttccaa ttgaaacgtt tcattttaaa ttatgaggta
    18301 gtgtattatt tgagctttct ataatctttg gaaaccaaaa gtgatgctct tttatgatag
    18361 cattgtcttc tcgaagaata gataagatc
//
LOCUS       DANMCL010000055        18319 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.055, whole genome shotgun sequence.
ACCESSION   DANMCL010000055 DANMCL010000000
VERSION     DANMCL010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18319
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.055"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(47..122)
                     /locus_tag="PXF40_001678"
     tRNA            complement(47..122)
                     /locus_tag="PXF40_001678"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(87..89),aa:Asn,seq:gtt)
     gene            complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXF40_001679"
     CDS             complement(238..987)
                     /gene="moeB"
                     /locus_tag="PXF40_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HDL5803004.1"
                     /translation="MELTDHEMLRYNRQIILKSVDFDGQEKLKASRVLIVGLGGLGCA
                     ASQYLASAGVGHLTLVDFDLVSLSNLQRQILHTDATIGQPKVESAKARLAAINPNIQI
                     ETINQRCSDEQLAKLIANVDLVLDCTDNVTVRNQLNLQCFKQKRPLVSGSAIRFEGQV
                     SVFCYQEQEPCYECLSRLFGDATLSCVEAGVIAPIVGIIGSIQALEAIKVLLNIGRTL
                     SGKLLMIDGLHFSVREMALPKQNNCPVCTSY"
     gene            complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXF40_001680"
     CDS             complement(1086..2315)
                     /gene="moeA"
                     /locus_tag="PXF40_001680"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HDL5803005.1"
                     /translation="MALLALSDALDNMLARLSTPKLVEQLPLNECANRVLAEDIFSPI
                     NVPNFDNSAMDGYAVRISDLAQNLTLNVAGKAFAGNPFNGEIKAGECVRIMTGALVPK
                     GVDAVVMQEETTLNSDGSVTFNHIPKLGSNIRRIGEDVKQGALVLKKGSLLNVASLPL
                     LASLGIASVPVFVKLKVAILSTGDELTSVGEPLSEGKIYDTNRFAVRLMLEKLNCEIL
                     DFGILPDDPILFEQTFRQAQQQADVLITSGGVSVGEADFTKDVLEKLGEIGFWKIAMK
                     PGKPFAFGKLEQAWFFGLPGNPVSALVTFYQLAQPALAKLSGLSTDKIAKLTQNLTAC
                     SAGKLKKAVGRQDFQRGYYYANEKGELEVRAVGTQGSHIFSAFNESNCFIVLEAERGN
                     VDAGEKVTIQPFNSLMY"
     gene            complement(2337..2954)
                     /locus_tag="PXF40_001681"
     CDS             complement(2337..2954)
                     /locus_tag="PXF40_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006719828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HDL5803006.1"
                     /translation="MFDSLAVQFVVLWAVIDPIGSVPVYLAKTIGLPIEARRKIALNA
                     VLIAAGILIFFLIGGQVLLESMQIPLPAFQAAGGLVLLLFALTMIFGESKPEQEMRIS
                     SNLNELAVYPLAVPSIASPGAMMAIVLLTDNHRFHIGDQIITAGIMLLVLFITYLLLL
                     AANRIQHLIGNAGAAIISRVMGLILAAIAVNNLLIGVRDFFVQIS"
     gene            complement(3022..4233)
                     /locus_tag="PXF40_001682"
     CDS             complement(3022..4233)
                     /locus_tag="PXF40_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HDL5803007.1"
                     /translation="MISRQMQSLLKRLVAQFPAVLVTGARQVGKSTLLQHIGEGYQYI
                     TFDDPMLLELAKQESRLFFLNHQGKLILDEVQYVPEIFALLKLEIDKKQQNGLFLLSG
                     SQAFELMQNVSETLAGRIAILKLQGLSLREILGVKFDQPFLPTTDYLLAREQELKSPE
                     NIWQLIHKGDMPRLYAQEVDWEIYYRSYVATYIERDVRQLTNIASTTDFTRFMVSIAS
                     RSGELLNYSNIAQEVGVSNETIKRWVAILQTSGIIYLLQPYHNNHLKRAIKTPKVYFL
                     DTGLMAYLTKWLTPETIAQGAKSWQFFETFVVSQIIKSFHNQGIEPPIYFYRDTNQKE
                     IDLIIEYDRTLYPIEIKVTASPTKKMAKSFDLLNSVSSEWKLGQGAIINQYPTKLYLS
                     ENLVALPVSYL"
     gene            4430..6361
                     /locus_tag="PXF40_001683"
     CDS             4430..6361
                     /locus_tag="PXF40_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803008.1"
                     /translation="MIFFTDLILKRGHSVLIDNSSVTIHTGQKVGLVGKNGCGKSSLF
                     ALLKNELQPEGGDVSLPKNWAISWVNQETPALAISALDYVIQGDREYTHLMAELDIAN
                     EKNDGNRIAIIHTQLDTIDAWTIQSRAATLLNGLGFSTEQLQLPVKSFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLERWLSNYRGTLLLISHDRDFLDPIIDRVIH
                     IEHQKLNEYTGNYTSFEIQRATKIAQQNAAYQQQQRKVAHLQSFIDRFKAKATKAKQA
                     QSRIKALEKMELIAPAYADSPFEFEFRPPLALPSPLLMMEKVSAGYAEKTVLESVKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELPPQNGSIQLAKGVQLGYFAQHQVDTLRFDE
                     SPLWHLQKLAPEKTEQELRNYLGGFDFKGDKVVQAVKSFSGGEKARLVLALIVWQRPN
                     LLLLDESTNHLDLEMRQALVDALTYYEGSLVVVSHDRHLLRSTVNEFYLVHDRKVEKF
                     KGDLDDYQKWLNEQNALANEPKSVLAKDSANSTACSSTNENSAAQRKEQKRLEAERRQ
                     QTAPLRKKITQLEKELEKATEKLNKLEAMLTESDIYEAENKAKLTETLAKQLEAKRLV
                     EEIEMQWLEAQEEFETMLR"
     gene            6640..6897
                     /locus_tag="PXF40_001684"
     CDS             6640..6897
                     /locus_tag="PXF40_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5803009.1"
                     /translation="MKNLRLSIHSSEHIWLRELFLKRRLELGLTQRTLGEKMGVLYSF
                     IGKVETGDRRLDIFEFIAYCKGLDLDPLSVLQEIEQQFPHK"
     gene            complement(6944..7564)
                     /locus_tag="PXF40_001685"
     CDS             complement(6944..7564)
                     /locus_tag="PXF40_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HDL5803010.1"
                     /translation="MKLWYSTTSPFARKALAVIKHHQLDDKVEMLRVTKAMDPNSPHN
                     QDNPLGRIPALQRNCGRWLFGSLLISEYLDQKGNNTPLLPKEGKPRWAVLALHNLADG
                     IMENTMPTLLQERMARPENEWWVSRHEQLMERNIRSFRQLEEALQEFGTELNLGTLTA
                     VALIDWWAFRLDKIGYDLAKNYPNLTAWAEEMNNKYAILAETKPSM"
     gene            complement(7566..8219)
                     /locus_tag="PXF40_001686"
     CDS             complement(7566..8219)
                     /locus_tag="PXF40_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HDL5803011.1"
                     /translation="MTPTLPICYQHRDFIIINKPEGLSVHKDEAEIGLTELVARQLNV
                     KQVWLVHRLDKITSGLLILALNKEAAARFYHLFEQHKIYKTYWALSDKKPKKKQGRIV
                     GDMQKSRNGAWKLCHSKENPAVTQFISHSVEDSLRHFILQPKTGKTHQLRVAMKSLGS
                     PILGDKLYSGSQADRVYLHAYQLDFEYENEKISVQALPTSGHFWQKICKSNHIKHGE"
     gene            8268..8927
                     /locus_tag="PXF40_001687"
     CDS             8268..8927
                     /locus_tag="PXF40_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HDL5803012.1"
                     /translation="MAVTIYLVRHGRTVWNLEGRLQGSGDSALVEEGIIGAKKTGIAL
                     KHIPFTAAYSSMQKRAQDTANYILAENERSNIPHFHHKGLNEFDFGSWEGMKSVDLQE
                     NDEYWVMKRTPAEYLAKANGGERFEQLYQRVTQAFNQIAELHQNDGKVLIVSHGMTLT
                     LLTAVLKGIAWQDFRNEEKHSFVFNTAITKVEVENGKVTVLEFNNTDHLDNVPTSQYK
                     R"
     gene            complement(8964..10010)
                     /locus_tag="PXF40_001688"
     CDS             complement(8964..10010)
                     /locus_tag="PXF40_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HDL5803013.1"
                     /translation="MSKQIFNEEELKTTEHFEPKQEFDLENAIIEEEEKAVEAELIIE
                     ESLKPSRFWIRVLLATLALFGVAVIAQSIQWLIDTFQQREWIYFAFSIVFFIVSLLGV
                     GAIISEWRKLVYLRNHQKNQQMSNQLLLEQLPSNDGEQAVKFCENIANQLNHLPSIAQ
                     AEQLWKSELNEAYNAKEVLYLFSENVLKPIDKQVKQMISRNAAENAVIVAVSPLAIVD
                     VLLMAARNIALVNKITKAYGMELGYISRLKLFKMVLKNMVFAGATEIATDVGMDFFSQ
                     NLTAKLSLRAAQGIGVGLLTARLGIKAMEFCRPVAFQANEKPRISAIRQELLTSVKNT
                     VFAKTETKEKVFSD"
     gene            complement(10010..10963)
                     /gene="dusC"
                     /locus_tag="PXF40_001689"
     CDS             complement(10010..10963)
                     /gene="dusC"
                     /locus_tag="PXF40_001689"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
                     /protein_id="HDL5803014.1"
                     /translation="MNPIPNVILAPMQGVLDPFVRNLLTSVNDYDLCISEFVRVVDQR
                     LPKKTFYRLAPELYQGGLTDSGTPVRVQLLGQHPQWLAENAALAIELGSHGVDLNCGC
                     PSKTVNGSNGGASLLKDPELIYRATKAMREAVPSDKIVSVKVRLGWDSVSQCFEIADA
                     VEQGGANEITVHGRTKVDGYRAERINWQAIGEIQQRLSIPVIANGEIWDFESAKNCQK
                     ITACKALMMGRGALNTPNLSKVVKYNVPKMAWNEVLQLLFKYVQMENQFDTGFYHVAR
                     IKQWLRYLDKEYPQAVELFDILKTEHGYDGLKAHIEKAVEE"
     gene            complement(11041..11667)
                     /locus_tag="PXF40_001690"
     CDS             complement(11041..11667)
                     /locus_tag="PXF40_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HDL5803015.1"
                     /translation="MDSRSHIIPLFLAIVITVIAVWSGLNPTDRAVWYAEVIPIFIVF
                     ALLIITYPKFQFSGLAYFLMSLWLIMHLIGAKYTFANVPFEWANQFLTPILGEDRNHF
                     DRVAHYIIGFYSFPMAEWLLRKRKCGMGVAFFFSLFFIMSVAAAYEIIEWQYAVIEGG
                     NAGVEFLGSQGDIWDAQKDMLADTLGALTALMIYLIARPDLRIHDRHF"
     gene            complement(11667..12524)
                     /gene="djlA"
                     /locus_tag="PXF40_001691"
     CDS             complement(11667..12524)
                     /gene="djlA"
                     /locus_tag="PXF40_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HDL5803016.1"
                     /translation="MQFIGKIVGFFLGYQLFHGLFGGILGAFIGHLADKKLYELGSVR
                     SSLFGKNLTRQSLFTQTTFAVLGHIAKAKGRVTEADIELARALMARLKLDSAAQQLAQ
                     NAFTLGKEPDFPLRQVIQEFREACGARTDLLRFFVEVQMQAALQDGQLDVNEQQILFT
                     IAETMGMSRFQFEQMIAMIMAAQQFRNGGYYQQNGSYHQQSQGGYQGSYQQPAQPSIE
                     AAYTVLGVTAQDDQNTVKRAYRKLMNEHHPDKLAAKGLPDEMMELAKEKAQQIQAAYD
                     LICKVKEWK"
     gene            complement(12572..13282)
                     /locus_tag="PXF40_001692"
     CDS             complement(12572..13282)
                     /locus_tag="PXF40_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5803017.1"
                     /translation="MWKNRQLFFGYAENRLLLLSRSITGLLGILCGVYIIDHLVLSDV
                     DMIGKLTSFILIILSAIFLKERASLLQWILCLIAFIGALFIIKPAVDIRFMPYLVGVI
                     GSVFAAIAYLCLRLLAKTKKVESPNTIVFFFSAFSTLILLPFVAIDYVVLTNLQTIYL
                     VLAGVTSAVGQFCVTTAYKYAAAKDISIYSYASVLFSAILGLLFFEQYPDMLSWLGYA
                     IIFVSSWLMFVLTKKQSK"
     gene            complement(13518..14003)
                     /locus_tag="PXF40_001693"
     CDS             complement(13518..14003)
                     /locus_tag="PXF40_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HDL5803018.1"
                     /translation="MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAANAA
                     GEFGGLTAEQLKAQYNTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADER
                     GTPEYNIALGQRRADAVKGYLAAKGANNTSTVSYGEEKPAVLGHSEADYAKNRRAVLE
                     Y"
     gene            complement(14030..15316)
                     /gene="tolB"
                     /locus_tag="PXF40_001694"
     CDS             complement(14030..15316)
                     /gene="tolB"
                     /locus_tag="PXF40_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HDL5803019.1"
                     /translation="MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAV
                     VPFKASGVPADVAQIISDDLRNSGKFTPLERSQMPAQPGSAAEVVADQWSAIGIDNIV
                     VGQVSSTGGGYNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKL
                     TQIRGAFRTKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAY
                     VTFENKKAQVVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVG
                     SGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMGGSGS
                     YNAKVSSDGKNLIMIAGDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG
                     TSKVLQLVSADGRFKANLPGAGGHYKFPAWSPYLTK"
     gene            complement(15332..16555)
                     /gene="tolA"
                     /locus_tag="PXF40_001695"
     CDS             complement(15332..16555)
                     /gene="tolA"
                     /locus_tag="PXF40_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HDL5803020.1"
                     /translation="MKSQQDRLELAVIVSILLHILLIGLLLLGSLFTKTELAAAGGSG
                     GDSDSFEAVMVDTGQVAAEYGQLLAEKKGSKASKPKVEPKEEAVEEDVEDKPTPEEIQ
                     KQKQAELAAIQEKQRQQEIERQQKLQEQQKQEQAKQEELKKQQAEEATRKKAAEAAKL
                     KADAEAKRLEAAAKQAEEEKKAKEALEKKLEQQKKAEAEKKLKEQKELKEQQAKEAKE
                     AKEKAEKEAKAKAEKEAKEKAEKEAKAKAEKEAKEKAEKEAKAKAAAEAKAAQAKNNK
                     ALDDFLNSGDIGGGSSKGGNKNSAGSQGSGGTSGLGQGTNVDGNAYGQRIKKLIQSRY
                     RVDPSFAGKQCDVKIFLSRDGTITNYQVISGDKAVCDAAVSAIVATRKVPPAPSDAVY
                     NMFKSPTLDFSLKVK"
     gene            complement(16569..17006)
                     /gene="tolR"
                     /locus_tag="PXF40_001696"
     CDS             complement(16569..17006)
                     /gene="tolR"
                     /locus_tag="PXF40_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HDL5803021.1"
                     /translation="MSRRLKRNDIKSEINIVPFLDVLLVLLLIFMATAPIISQSVEVN
                     LPEDTHSQSVSNEDKTPVILEVAGVGEYKLKIDGNYVQSNGQENINESEVVAYAGEQF
                     QKDNNTLFLVAGDKVVPYEEIMKGITLLKDAGVKSVGLMTEGK"
     gene            complement(17148..17828)
                     /gene="tolQ"
                     /locus_tag="PXF40_001697"
     CDS             complement(17148..17828)
                     /gene="tolQ"
                     /locus_tag="PXF40_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HDL5803022.1"
                     /translation="MQTEFSLLSLFLEASIVVKIVMLILIVFSILSWAVIIQRSKILT
                     KAKKDSLAFEDRFWSGEDLNRLHQGLENRRDALNGSEQIFYVGFKEFTRLQQANPDAP
                     ESIIQGSTRAMNLALNREMESLENYIPFLGTVGSISPYIGLFGTVWGIMHSFMGLSAV
                     KQATLQSVAPGIAEALIATAIGLFAAIPAVMAYNRLNLRLGKVEQGYVNFIDEFTTLL
                     HRQAFSKR"
     gene            complement(17850..18251)
                     /gene="ybgC"
                     /locus_tag="PXF40_001698"
     CDS             complement(17850..18251)
                     /gene="ybgC"
                     /locus_tag="PXF40_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HDL5803023.1"
                     /translation="MDFPIRVYYEDTDAGGVVYHSNYLNFFERARTEFLRQQHFSQQE
                     LFSQSLAFVVKRIEIDYKLPARLDDLLNVETTLSELKKATLIFKQRLWKDGDCLSEAN
                     VTVACVDLIKMKPVAIPDDIRQALQKSYFSI"
BASE COUNT         5436 a         4114 c         3414 g         5355 t
ORIGIN      
        1 tataaaagga gacaaataaa acaagaacaa aagaaaaata aaatcttggc tcctcctgcg
       61 ggactcgaac ctgcgacata tggattaaca gtccaccgtt ctaccgactg aactaaggag
      121 gaattaacgg tgtaaataat aggctaaaac gttttagccg tcaaataaaa aaaataaact
      181 gtcgttcatt ttttacattt cttgacattt tttcgccaat aagtatgaga aaaatactta
      241 ataagaggta caaaccggac agttattttg cttaggtaat gccatttctc tgacagaaaa
      301 atgcaagccg tcaatcatta acaattttcc ggaaagagtt ctgccgatat taagtagcac
      361 tttaattgct tccaacgctt gaatactgcc tatgatgcca acaatcggag caatgacccc
      421 cgcttcaaca caacttaaag tcgcatcacc aaacaacctg cttaaacatt catagcacgg
      481 ttcttgttct tgataacaaa atacactcac ctgcccttca aatcgaattg ccgaaccgga
      541 aacaagcggt cgtttttgct taaaacattg caaatttaac tgattacgca cagtaacgtt
      601 atcggtacaa tccagcacta aatctacatt tgcaatcagc ttggctaact gctcatcgga
      661 acatcgctga ttgatagttt caatctgaat gttcggatta atcgccgcta atcgagcttt
      721 ggcagattcc acctttggct gcccgatagt cgcatcggta tgtaaaattt ggcgttgcag
      781 attagaaagt gagaccagat caaaatccac caaagtcaaa tgcccaacgc cggcagaagc
      841 taagtattgc gatgccgcac agcccaaacc acctaaaccg acaatcaaca ctcggctggc
      901 ttttaacttt tcctgcccgt caaaatccac gctttttagg ataatctggc gattataacg
      961 tagcatttcg tgatcggtaa gttccatttt tacacctaaa gagtaaacga tggcgcaagc
     1021 gtccacgctt gtgcctatat ttttattgct agcacaagcg tggacgcttg cgctatctta
     1081 attcattaat acatcagcga attaaacggc tgaatagtga ctttttcccc agcatcaaca
     1141 ttgcctcgtt ctgcttctag cacaataaaa cagttacttt cattaaaagc gctgaaaata
     1201 tgtgagcctt gcgtgccaac tgcacgaact tctaactcac ctttttcatt ggcatagtaa
     1261 tagccccgtt ggaaatcttg gcgaccgacc gcttttttca attttccggc actgcaagcg
     1321 gttagatttt gggttaattt tgcaatttta tctgtcgata aacccgaaag tttggctaac
     1381 gccggttgcg ctaattggta gaaagtcact aatgcagaga cagggttgcc cggcagccca
     1441 aaaaaccaag cctgttctaa tttaccgaat gcaaaaggct tgcccggctt catcgcaatt
     1501 ttccagaaac cgatttcgcc taatttttcc agtacatctt tggtaaaatc tgcctctccc
     1561 acagatacgc cgccactggt aatcaacaca tcggcttgct gttgggcttg cctgaaagtt
     1621 tgctcaaaca gaattgggtc atcaggcaaa atcccaaaat ctaaaatctc gcagttgagt
     1681 ttttccagca ttaaacgcac cgcaaaacgg ttggtgtcgt aaatttttcc ctcactcaaa
     1741 ggctcgccaa ctgaggttaa ttcatcgccg gttgaaagaa ttgccacttt taattttaca
     1801 aaaacaggca cagaagcaat accgagtgaa gctagcaacg gtaaactggc tacattcaat
     1861 aatgagcctt ttttcaagac caatgccccc tgtttaacat cttccccaat gcggcgaatg
     1921 ttactgccta attttggaat atggttaaag gttacagagc catcggaatt taacgtagtt
     1981 tcctcttgca ttacaacggc atcaacgccc tttggcacta atgctcccgt cataatccgc
     2041 acgcattcgc ctgcctttat ttcgccgtta aacgggttac cggcaaaggc tttaccagcc
     2101 acattcaagg ttaaattttg tgctaaatct gaaatacgaa ccgcgtagcc gtccatcgcc
     2161 gaattatcaa aattcggtac attaatcggg gaaaaaatat cctctgccaa cactcggtta
     2221 gcacactcat ttaacggaag ttgttccacc aatttaggtg tcgataaacg agcaagcata
     2281 ttatctaacg catcactcaa agccaaaagt gccataattt cctacctatt caacgtttag
     2341 ctaatttgta caaagaaatc ccgtacgcca atcaacagat tattcaccgc aatcgcagcc
     2401 agaattaacc ccatcactcg gctgataatc gcagcccctg cattaccaat aaggtgctga
     2461 atacggtttg ccgctaatag caacaaatag gtaataaaga gtaccaaaag cataatgccg
     2521 gcggtgataa tttgatcgcc gatatgaaaa cggtgattgt cggttaataa tacgattgcc
     2581 atcatcgccc cgggagaagc aatcgacggt acagctagcg gataaaccgc caattcattc
     2641 agattactgc tgatccgcat ttcttgctcg ggcttgcttt cgccaaaaat catcgttaaa
     2701 gcaaataaca acagcactaa gccgcctgcc gcttggaatg caggtaacgg aatctgcatt
     2761 gattctaaca gcacttgccc accgataagg aagaaaatca aaataccggc ggcaatcaag
     2821 accgcattta gtgcaatttt acgccgtgct tcaatcggca aaccaatggt ttttgccaaa
     2881 taaacaggaa cagaaccaat cgggtcgatc accgcccata aaaccacaaa ttgtaccgct
     2941 aatgaatcaa acatattctc tcctgttatc ttgataattt gcaaaatttt agcataaaac
     3001 aaccgcttgc acggcttttt cttacagata gctcaccggt aacgctacca aattttcact
     3061 taaataaagt ttggtcggat attggttaat aatcgctccc tgccctaatt tccattcact
     3121 agaaactgag tttagcaagt caaaactttt tgccattttt ttggttgggc ttgccgtgac
     3181 cttaatttct atcggataaa gcgtgcgatc atattcaata attaagtcga tctctttctg
     3241 gttagtatca cggtaaaaat aaatcggcgg ctcaattcct tgattatgaa aggattttat
     3301 aatttggctt accacaaagg tttcaaagaa ctgccagctt tttgcccctt gagcaatagt
     3361 ttcgggggta agccatttgg ttaaatacgc cattaacccg gtgtctagaa aatacacttt
     3421 tggggtctta attgcccgtt tcaaatgatt gttgtggtat ggctggagca aatagataat
     3481 gccggaagtc tgcaaaatgg cgacccaacg tttaatcgtt tcattcgata ctccaacttc
     3541 ttgagcaata ttactgtaat tgagtagctc accactacga gaggcaatag agaccataaa
     3601 acgggtaaaa tccgttgtgc tggcaatatt ggttaattgg cgaacatctc gctcaatgta
     3661 ggtcgctaca taagagcgat aataaatctc ccaatccacc tcttgtgcat ataaacgagg
     3721 catatcgcct ttatggataa gctgccagat gttctccggt gattttaatt cttgctcccg
     3781 agctaacaaa tagtcggttg tcggtaaaaa aggttgatcg aacttcaccc ctaaaatttc
     3841 acgcaacgaa agcccttgta attttaaaat agcaatacga ccggcaagtg tttcactcac
     3901 attctgcatt aattcaaagg cttgcgaccc cgaaagtaaa aacaaaccgt tttgctgttt
     3961 tttatcaatt tctaacttta ataacgcaaa aatttcaggc acatactgta cttcgtctaa
     4021 aataagcttg ccttgatggt ttaaaaaaaa caggcgagat tcttgtttag ccagctccag
     4081 caacattggg tcatcaaaag taatatattg atagccctca ccaatatgtt gtaacaatgt
     4141 cgatttacca acctgtcttg cccctgtcac taaaacggca ggaaattgcg ccacgagtcg
     4201 ttttaacagc gattgcattt gccgagaaat catttttcct ccaaaatagc ctaaatcaag
     4261 tttaacctca tatataatgt tgaattaaac ttaatttaaa ttatttttta agtttaattc
     4321 aacacagaat attgaattaa actgaatttc ttattttagt tcacaaagca atggctttgc
     4381 ttttttatgc taaaatacgc aaaattttta acaaaataga ccgcttgcaa tgatcttttt
     4441 tacagactta attttaaaac gagggcattc cgttctcatt gataacagct ccgttaccat
     4501 tcacaccggg cagaaagtcg gtttggtggg aaaaaacggc tgtggcaaat cctctctttt
     4561 tgccttactg aaaaatgaat tacaacctga aggtggcgat gtatcgttgc cgaaaaactg
     4621 ggcgatctcg tgggtaaatc aagaaacgcc tgcgttagct atttcagcgt tagactatgt
     4681 gattcaagga gatcgggaat atacccatct tatggctgag ctagatatcg caaatgaaaa
     4741 gaatgacggc aaccgcattg cgattatcca tactcaactt gataccattg atgcttggac
     4801 aattcaatcc cgtgccgcta ccctgcttaa cggcttgggg tttagcaccg aacaactgca
     4861 actgccggtg aaatccttct ccggtggctg gcgtatgcgg ttaaatttgg cacaagctct
     4921 gatttgtcgt tccgatctgt tattgcttga cgagccaacc aaccacttag acttagatgc
     4981 ggttatttgg ttggagcgtt ggctgagtaa ctatcgtggc actttattgt taatttcgca
     5041 cgaccgtgat tttctcgatc cgattatcga tcgggtgatt catattgaac atcaaaagct
     5101 caatgaatac accggcaatt acacctcgtt tgagattcaa cgtgcgacca aaatcgccca
     5161 gcagaatgcc gcttatcagc aacagcaacg taaagttgct catttgcaga gttttatcga
     5221 tcgctttaaa gccaaagcga ctaaagcgaa acaggcacaa agccgaatta aagcgttgga
     5281 aaaaatggag cttattgccc cagcctatgc tgattcgccg tttgaatttg aatttcgccc
     5341 accgcttgca ctgcctagcc cgttattaat gatggaaaaa gtcagtgccg gctatgcgga
     5401 aaaaacggtg ttggaatcgg tcaaactgaa tttggttccc ggctctcgta ttggtttact
     5461 cgggagaaac ggtgcaggga aatccacgct gattaaatta ttggcgggcg aacttccgcc
     5521 ccaaaacggc tcaattcaac tggcaaaagg cgtgcaactc ggctatttcg cccaacatca
     5581 ggtggataca ctacgttttg atgaaagccc actttggcat ttacaaaaac tcgcaccgga
     5641 aaaaaccgag caggaattac gcaattattt aggcggtttc gattttaaag gcgataaagt
     5701 ggtacaagct gtgaaatcat tctccggcgg agaaaaggcc cgtttagtgc ttgccttaat
     5761 tgtatggcaa cgcccgaatt tactgctatt agatgagtca accaaccatt tagatttaga
     5821 aatgcgacaa gccctggttg atgcactgac ctattacgaa ggctcgctag tggtggtttc
     5881 gcacgaccgc catttattgc gtagcaccgt gaatgaattt tatttagtgc acgaccgcaa
     5941 agtggaaaaa tttaaaggtg atttagacga ttaccaaaaa tggctcaatg agcaaaacgc
     6001 cttagccaac gagccgaaat ccgtacttgc aaaagattcg gcaaattcga ccgcttgctc
     6061 tagcaccaat gaaaatagtg cagctcaacg caaagagcaa aaacgcttag aggcagagcg
     6121 ccgccaacaa accgccccat tgcggaaaaa aattactcaa ctggaaaaag agttagaaaa
     6181 agcaaccgaa aaattaaata aactcgaagc aatgcttacc gaaagcgaca tttatgaagc
     6241 cgaaaataaa gcaaaactaa ctgaaacact tgcgaaacag ttagaggcaa aaaggctggt
     6301 tgaagaaatt gaaatgcaat ggttggaggc tcaggaggag tttgagacca tgttacgcta
     6361 gggttctaca agatagcgca agcgtccacg cttgtgccat ttaagggaac tatacacctc
     6421 aaaaaaacaa tgatcattaa gctagctttt ttataaattt aaaaacctat agattaaata
     6481 aataatgata ttaatagtaa aatcacgagt gcaactacac tgacgataat aaaatcaggc
     6541 atacttattc tccctataaa atgtggtaat gtaactacaa attaattata taatgaacct
     6601 aaaaaaggtt caacattatt tgtacctaat ataggtgcaa tgaaaaatct tagattatca
     6661 atacattcca gcgagcatat ttggttaaga gaactattct taaaacgccg tttggaacta
     6721 gggctaacac aacgcacatt aggagaaaaa atgggcgttc tttactcatt tatcggaaaa
     6781 gtagaaacag gagatcgcag attagatatt tttgaattta tcgcttattg caaagggtta
     6841 gatttagatc ctttatctgt attgcaagaa attgaacaac aatttcctca taaataaagg
     6901 cattgagtta taactcaatg cctttatttt ctatgtcaaa tctctacatg ctcggcttag
     6961 tctctgccag aatggcgtat ttattattca tttcctctgc ccaagcggtt aaatttgggt
     7021 aattttttgc aagatcgtag cctatcttat ctaagcggaa tgcccaccag tcaattaatg
     7081 ctactgcggt taatgtgcct aaattcagct ctgtgccaaa ctcttgcaat gcctcttcta
     7141 attgtctgaa cgaacggata ttgcgttcca ttaattgctc gtggcggctg acccaccatt
     7201 cattctcggg gcgagccata cgttcttgta ataaagttgg catcgtattt tccataatgc
     7261 cgtccgccaa attatgtaat gccaacactg cccagcgagg tttaccctct ttaggtaaca
     7321 gtggagtgtt attgcctttt tggtcaagat attcgctaat taacaaacta ccgaaaagcc
     7381 aacgtccgca gttgcgttgt agggcaggaa tacgtcctaa cgggttatct tgattatgtg
     7441 gcgaatttgg atccattgct tttgtcaccc gcaacatttc gactttatcg tctaattggt
     7501 ggtgtttaat caccgcaagg gctttgcggg cgaaagggct ggtggttgag taccaaagtt
     7561 tcatactatt ctccgtgttt gatgtgattg gatttgcaaa ttttttgcca aaaatgaccg
     7621 cttgtcggca aggcttgcac tgagattttc tcattttcgt attcaaaatc aagctgataa
     7681 gcgtgcaaat aaacacggtc ggcttggcta cctgaataga gtttatcacc taaaatcggg
     7741 ctgcccaaac ttttcattgc cactcttaat tggtgagttt tgcctgtttt gggttgcaaa
     7801 ataaaatgcc tgagcgagtc ttcaacagaa tgagaaataa attgcgttac tgccgggttt
     7861 tccttactgt ggcataattt ccacgctcca tttctgcttt tttgcatatc gccaacaatt
     7921 ctaccctgct ttttcttcgg ctttttatcg cttaatgccc aataggtttt gtagatttta
     7981 tgctgttcaa ataaatggta aaaccttgct gccgcctctt tattcaacgc taaaatcagt
     8041 aaacctgagg tgattttatc cagacggtga accagccaaa cctgctttac attcagttgg
     8101 cgagccacta attccgttaa gccgatttca gcctcatctt tatgcacact caagccttcc
     8161 ggcttattga taataataaa atcacgatgt tgataacaaa taggcaatgt tggggtcatt
     8221 ttgctataat ccttccaatt tttgactatt ttagcaagga aattacaatg gctgttacca
     8281 tttatttagt acgacacggc agaaccgtgt ggaatttgga aggcagatta caaggctcgg
     8341 gcgattccgc tttagtagaa gaagggatta tcggagcgaa gaaaaccggc attgcgttaa
     8401 aacatattcc gtttaccgcc gcctattcca gtatgcagaa acgggctcaa gataccgcaa
     8461 actacatttt agcagaaaat gaacgcagta atattccgca ttttcatcat aaaggcttga
     8521 atgaatttga ttttggcagc tgggaaggaa tgaaatctgt cgatttgcaa gaaaatgatg
     8581 aatattgggt gatgaaacgt acaccggcag aatatctggc aaaagcaaac ggtggcgagc
     8641 gatttgagca actttatcaa cgggtgactc aggcgttcaa tcaaatcgcc gagctacacc
     8701 aaaatgacgg caaagtgctg attgtttcac atggtatgac cttaacctta ctcacggctg
     8761 tgttaaaagg cattgcgtgg caagatttcc gcaatgaaga aaaacatagc tttgtgttca
     8821 atactgccat tacgaaagta gaagtagaga atggcaaagt aacggtgctg gaatttaata
     8881 ataccgacca tttggataat gtgccaacaa gccaatacaa acgataatat taagggcgga
     8941 acattgtccg cccatagcat tttctaatca gagaacactt tttctttcgt ttctgtttta
     9001 gcaaataccg tatttttgac cgaagtaagc aactcctgac gaatagctga aattcttggc
     9061 ttctcattcg cttgaaaagc aacaggacga caaaattcca ttgctttaat gccaaggcga
     9121 gcagtgagta aacccacacc aataccttgt gcggcacgga gcgataattt cgccgtaagg
     9181 ttttgcgaga agaaatccat tccaacatca gtagcgattt cggttgcacc ggcgaacacc
     9241 atatttttca gcaccatttt gaacagtttt aagcggctga tataacccaa ttccattcca
     9301 taggctttgg taattttatt cactaaagcg atatttcttg ccgccattaa caacacatca
     9361 actattgcca gcgggctaac cgccacaatc accgcatttt ctgccgcatt gcgggaaatc
     9421 atctgcttaa cctgtttatc tatcggcttt agcacatttt cgctaaacag atatagtacc
     9481 tctttggcat tataagcctc gttcagttcg cttttccaaa gttgctcggc ttgagcaatg
     9541 ctcggcaagt gattaagctg atttgcaata ttttcgcaaa atttgaccgc ttgttcgcca
     9601 tcattggaag gcagctgttc cagcaataat tggttactca tttgttgatt tttctgatga
     9661 tttcgcaaat acaccaactt tcgccattcg gaaataatcg ccccaacgcc caacaagctg
     9721 acaataaaaa agactatcga gaacgcaaaa tagatccact ctctttgctg gaacgtatca
     9781 atcaaccact gaatactttg agcaattacc gccacgccaa acaaggcaag tgtggcaagt
     9841 agtactcgaa tccaaaagcg ggaaggctta aggctttctt caataatcag ctccgcctca
     9901 actgcttttt cctcttcttc aataatcgca ttttcgagat caaactcttg tttaggttca
     9961 aaatgctcgg ttgtttttag ctcttcttca ttaaaaattt gcttactcat tattcctcca
    10021 ctgccttttc aatatgtgct tttagaccat catagccgtg ttcggttttc aagatatcaa
    10081 ataattctac cgcttgagga tattctttat ccaaataacg tagccattgt ttgatgcgag
    10141 caacgtggta aaaaccggta tcaaactgat tttccatctg aacgtactta aacaatagct
    10201 gtagcacttc attccacgcc attttcggaa cattatattt caccactttg cttaaattcg
    10261 gtgtgtttaa cgccccacgc cccatcatta atgccttgca agcggttatt ttttggcaat
    10321 ttttcgccga ttcaaaatcc caaatttcgc cgttggcgat aacaggaata gacagccgtt
    10381 gttgaatttc gccaatcgcc tgccaattaa ttctttctgc tcgataacca tcaactttgg
    10441 ttcgcccgtg aacggtaatt tcattcgctc cgccctgttc taccgcatcg gcaatttcaa
    10501 aacattggct aacggaatcc caacctaatc gcacttttac ggaaacgatt ttatcgcttg
    10561 gcacagcttc acgcatcgct ttggttgcac gataaatcag ttccggatct tttaataacg
    10621 aagccccacc attgctgcca tttaccgttt tagaggggca gccacagttg agatctaccc
    10681 cgtgtgaacc aagctcaatg gcaagagctg cattttctgc cagccactgt gggtgttgcc
    10741 ctaaaagctg tacccgcact ggtgtgccgg aatcggttaa tccgccttga tatagctcag
    10801 gggctaggcg ataaaaggtt ttcttcggta aacgttgatc gaccactcgc acaaattcgg
    10861 aaatacagag atcgtagtca ttcactgaag ttaaaaggtt gcggacaaaa gggtctaaaa
    10921 ccccttgcat cggggcaaga ataacgttag gaattggatt cattggtaaa ataaaaaata
    10981 caagcggtta ttttttctca acattttgca aaaaattggc aagaaacaac cgcttgaagg
    11041 ttaaaaatgt ctatcgtgaa tgcgcaaatc ggggcgagcg atcaggtaaa tcatcagtgc
    11101 ggttaatgcc ccaagagtat ccgcaagcat atctttttga gcgtcccaaa tatccccttg
    11161 cgagcctaga aattccacgc cggcattgcc accttcaatc acggcatatt gccattcaat
    11221 aatttcgtaa gctgccgcca ccgacataat gaaaaacagc gagaagaaaa atgctacgcc
    11281 cattccgcac ttgcgtttac gcagtaacca ttctgccatc gggaagctgt aaaaaccgat
    11341 aatgtaatgt gctactcgat caaaatggtt acgatcttca cctaaaatcg gggttagaaa
    11401 ttgatttgcc cactcaaacg gcacattggc aaaggtatat tttgccccga tcaagtgcat
    11461 aatcagccaa agcgacatca aaaaataagc taacccacta aactgaaatt tagggtaagt
    11521 gataattaaa agggcaaaaa cgataaaaat cggtatcact tccgcatacc aaactgcgcg
    11581 gtctgtcgga tttaaccctg accaaaccgc aatcacggta ataacaatcg ctaaaaatag
    11641 agggatgata tgcgagcgtg aatccattat ttccactctt tcactttaca aattaaatcg
    11701 tacgccgctt gaatttgttg agctttctct tttgccaact ccatcatctc atcaggcaaa
    11761 cctttagcgg ctaatttatc cgggtgatgt tcgttcatta acttacgata agcccgtttc
    11821 actgtatttt gatcgtcttg tgcggttacg cctaatacgg tataggctgc ctcaatgctt
    11881 ggttgtgcag gctgctgata actgccctga tagccacctt gagattgctg atgataactc
    11941 ccattttgct gataatagcc accattgcgg aattgttgag ctgccataat cattgcgatc
    12001 atctgctcaa attggaagcg agacattccc attgtttcgg caatcgtaaa cagaatttgt
    12061 tgctcgttca catcaagttg cccatcttgc aaggctgcct gcatttgcac ttcgacaaag
    12121 aaacgtaata agtcagttct tgccccacag gcttctctga actcttgaat gacttggcgt
    12181 aacgggaagt caggctcttt acctaaggta aaggcatttt gcgctaattg ctgggctgca
    12241 ctatctaatt ttaagcgagc cattaacgct cgggctaatt caatatccgc ttcagtaaca
    12301 cgcccttttg ctttcgcaat atgccccaac accgcaaaag tggtttgggt gaaaagcgat
    12361 tggcgagtta aatttttacc gaaaagactt gaacgaactg aacctaattc atagagtttt
    12421 ttatcggcta aatgcccgat aaaagcgcca agtatcccac caaataaacc gtgaaaaagc
    12481 tgatagccca agaaaaaacc gactattttt ccgataaatt gcattttttt atccttttat
    12541 agaaatgaat aaacgttatt ctaacaaaat tttactttga ttgcttttta gttaatacaa
    12601 acataagcca gcttgagaca aaaataattg cataacctag ccaactcaac atatccgggt
    12661 attgttcaaa gaacaacaac cctaaaattg cactaaatag cacagaggca taactataaa
    12721 ttgagatgtc tttcgccgcc gcatatttat aggcggtagt tacacaaaac tgcccgaccg
    12781 ctgaagttac ccctgctaac actaagtaga ttgtctgtaa attggttagc actacataat
    12841 caatggcgac aaaaggcaat aatatcaagg tcgaaaaggc agaaaaaaag aaaacaatgg
    12901 tattaggtga ttctactttt ttggtttttg ccaataacct taagcataaa taggcaatgg
    12961 ctgcaaacac agagccaatc acgccaacca gataaggcat aaagcgaata tcaactgccg
    13021 gtttgataat aaaaagtgcc ccgataaagg caataaggca taaaatccat tgcaggagag
    13081 atgctctctc ttttaaaaaa atcgcagaaa gaataattaa aatgaacgac gtgagtttgc
    13141 caatcatatc gacatcactt agcacaaggt gatcgatgat atatacacca cataaaatcc
    13201 ccaataaccc ggtgatggaa cggcttaata ataacaaacg attttctgca taaccaaaga
    13261 ataattggcg atttttccac acaatataac cgcttatcaa tgctgtgcgt tgcgaaaaat
    13321 cgctttttgt gcaatcggta catcccccga aagacgaaga aaagcagcca taatcgcaaa
    13381 gcttagtgcc gacaaaagca cacaaaaaat ggctttaaat aacggcgaga gcgaattcca
    13441 aaaattcata gcataaaggc ttttaataaa aataaagccc tgattattca gggcttcaat
    13501 ttagaatcaa ctaagaatta gtattctaat actgcacgac ggtttttcgc gtagtcagct
    13561 tctgagtgac ctaatactgc tggtttctct tcaccgtaag aaacagttga agtgttgtta
    13621 gcacctttag ctgctaagta acctttaact gcatctgcgc gacgttgacc taatgcgatg
    13681 ttgtactctg gagtaccacg ctcatcagcg tgaccagcaa tagttacgtt accttgagtt
    13741 tttgctaata attgagcgtg agcgtctaat aattgacggt attcaccttc aactgcatag
    13801 ctgtcaaaac cgaagtatac agtgttgtat tgtgctttta attgttcagc tgttaaacca
    13861 ccgaattcgc ctgctgcatt tgctgctgca tttgctgctg cgtttgctgc tgcgtttgct
    13921 gctgcatcat ctgatgagct gctacatgct gctaatgcga aagctggtac tgctaccatt
    13981 aatactttag caaatttttt catttgttgc tcctaataga gaaatattat tatttagtta
    14041 agtatggtga ccatgcaggg aatttataat gtccacctgc gccaggcaaa ttagctttaa
    14101 aacgcccatc tgcagacacc aattgtagca ctttactcgt acctttggta gagctataaa
    14161 taaccataat gccattcggt gaaatacttg gactttcgtc taagaaagtt gaactcagta
    14221 cttctgtgcc acctgaagcg agatcgcgtt tcacaactct atcaccggca atcatgatta
    14281 aattcttacc atcagatgat actttcgcat tatagctacc gctaccgccc attgggctag
    14341 caccaccacc tgatgaactc attctataaa cttgaggaga acctgcacgg tcagacgtaa
    14401 agtagattgt gctaccatct ggagaccagc ttggttcagt attatttcca gcattagcgg
    14461 tcaatttact tggtgtacca ccgccactac ctacaacata aatatttaac tcaccatctt
    14521 gatttgaggc aaacgcaatg cgagaaccgt ctggagagaa tgatggcgca ccattatgtc
    14581 ctttcaatgc tgccactaca cggcgagcac ctgaacgaat atcgtgaaca acaacctgcg
    14641 cttttttatt ttcaaatgtc acataagcta atctgctacc atctggtgac cactctggcg
    14701 acattaaagg ctctttactg gttgtaatag taaaggcatt aaaaccatca taatcagata
    14761 ctcgtaattc atacgatgat acgccacgtt gaaccacata cgcaatttta gttctaaatg
    14821 caccgcgaat ttgggttaat ttttcaaata cctcatcact tactgtatgc gcaccttgac
    14881 gaatttgggc tgccggaaca ataaatgaac cttgggcaat gacaccaccc gctgtacccg
    14941 atgtaccaag agtatcaatt aattgataag cgacattata accgccacct gtgctactca
    15001 cttggccaac tacaatatta tcaataccga tagcactcca ttgatctgcc accacttccg
    15061 ctgctgatcc cggttgagca ggcatttgag agcgttcaag cggtgtaaat ttaccactat
    15121 ttcgcaaatc atcagaaata atttgtgcaa catctgccgg cacaccgctg gctttaaatg
    15181 gcacaaccgc aatcggctga gccatactta caccttcatc aatagaaatt cgcacatcag
    15241 aatcagcaac cacctgagtt gtcaataatg ctgaaaagat gcctattaca cccgatatac
    15301 gagagaataa tttcatttgt agtcctctaa attatttaac ttttaaacta aaatcaagtg
    15361 ttggtgattt aaacatatta tataccgcat ctgatggtgc aggtggtact tttctagttg
    15421 ccactattgc acttaccgct gcatcacata ctgctttatc gccactgata acttgatagt
    15481 tagtaattgt gccatctcga cttaagaata tcttaacatc acattgtttt ccggcaaaac
    15541 ttggatcaac ccgatatcga gattgaatta atttcttaat tcgttgacca tatgcattac
    15601 catctacatt agtaccttgc cctaagccac ttgtaccacc agaaccttgt gatcctgctg
    15661 agtttttgtt accaccttta cttgaaccac caccgatgtc tccactattg aggaaatcat
    15721 caagtgcttt attgtttttc gcttgggcgg cttttgcctc agcagctgcc ttcgctttag
    15781 cttctttctc ggctttctct ttggcttctt tttctgcttt tgctttggct tctttctcag
    15841 ccttttcttt tgcttctttt tctgccttgg ctttagcttc tttttctgct ttttccttcg
    15901 cttctttagc ttcttttgcc tgctgttcct tcagttcttt ttgctctttt aactttttct
    15961 cagcttccgc tttcttctgc tgttcaagct tcttttcaag tgcttcttta gcttttttct
    16021 cttcttcagc ttgtttagca gcagcctcta aacgcttagc ttctgcatct gctttcagtt
    16081 ttgctgcttc agctgctttt ttacgagttg cttcttctgc ttgctgcttt ttaagctctt
    16141 cttgcttagc ttgttcttgc ttttgctgtt cttgtagttt ttgctgacgc tcaatttctt
    16201 gctgacgctg tttctcttga atcgccgcta actcagcttg tttctgtttt tggatctctt
    16261 ccggagtcgg tttatcttcc acatcttctt caacagcttc ctctttaggc tctacctttg
    16321 gcttcgatgc ttttgagcct tttttctctg ccaataactg cccatattca gcagccactt
    16381 gcccagtatc taccatcaca gcttcaaagc tatcgctatc gccaccactg ccaccagccg
    16441 cagcgagttc cgtcttagtg aaaagagacc cgagcaataa caacccgatt aacaatatat
    16501 gcaataagat cgaaacaata accgctagct ctagtctatc ttgttgagat ttcacacgtt
    16561 atccttggct atttaccttc tgtcattaaa cctaccgatt tcactccggc gtctttaagt
    16621 agtgtaatac ctttcataat ttcttcataa ggtactactt tatcaccggc aactaaaaat
    16681 aaggtattgt tatctttttg aaattgttcc cctgcatagg caacaacttc tgattcatta
    16741 atattctctt gcccattact ttgcacatag ttaccgtcaa ttttcaattt atattcacca
    16801 acacctgcca cctccaaaat cactggagtt ttatcttcat tagaaactga ttggctatgc
    16861 gtatcttccg gtaaattaac ttctacactt tgactgataa ttggggccgt tgccataaaa
    16921 atcagcaata ataccaacaa tacatcaaga aatggaacaa tgttgatttc tgatttaatg
    16981 tcattacgtt ttaaacgacg agacatatat tcctctttac aggtgcttag caccttaatt
    17041 gatctgaaat aaccggcaca gtgtcccggt ctcgaataat gcggttacaa gcggtctttt
    17101 ttacgaaaaa ctttacaaat tttcattaaa aatcaaccgc ttgtagatta tctttttgaa
    17161 aaagcctgac ggtgtaataa ggtcgtgaac tcatcaatga aattcacata cccttgctca
    17221 actttaccta aacgtaaatt caaacggtta tatgccatta ctgcaggaat cgccgcaaat
    17281 aaaccgatag ccgttgcaat taatgcttct gcaatacccg gtgcgactga ttgtaaagtt
    17341 gcttgcttaa ctgcacttaa tcccataaag gagtgcataa ttccccaaac cgttccgaat
    17401 aaaccaatat atgggctgat tgaacccact gtgcctaaaa acggaatgta gttttctaaa
    17461 ctttccattt cacggtttaa tgctaagttc atcgcacggg tagaaccttg aataatcgat
    17521 tctggcgcat ctgggttcgc ttgttgtaaa cgggtaaatt ctttaaaccc aacataaaag
    17581 atttgctctg aaccatttaa tgcatcacga cgattctcta aaccttggtg taaacggttt
    17641 agatcttccc ctgaccagaa tcgatcttca aaagcaaggg aatctttttt ggctttagtt
    17701 aaaattttgc tgcgctgaat aatcaccgcc caagacaaaa ttgagaatac aataaggatc
    17761 agcatcacga tctttaccac aatacttgct tctaaaaata acgaaagaag actaaattca
    17821 gtttgcatta ataaaactcc gaatagtttt taaatagaaa aataactttt ttgtaatgct
    17881 tgacgaatat catcaggaat tgcaaccggc ttcattttga ttaaatcaac acaagcgacc
    17941 gtaacatttg cctcactcag acaatcgcca tctttccaca atcgttgttt aaagataagg
    18001 gttgctttct tcaattctga gagtgttgtt tccacattta ataaatcatc taaacgagca
    18061 gggagcttat aatctatttc aatcctctta acaacaaaag caagggattg gctaaaaagt
    18121 tcctgctgtg agaaatgctg ctgtctcaaa aattccgttc ttgcccgctc aaaaaaattc
    18181 agatagttgg aatgataaac tactccgccg gcatcagtat cttcataata aacacgaatc
    18241 gggaaatcca taagcattat ttctctcatt caaaatgaaa aaacgcccaa aatttaggcg
    18301 caaattgtga gatatttta
//
LOCUS       DANMCL010000056        18107 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.056, whole genome shotgun sequence.
ACCESSION   DANMCL010000056 DANMCL010000000
VERSION     DANMCL010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 18107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18107
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.056"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            80..1171
                     /gene="ulaG"
                     /locus_tag="PXF40_001699"
     CDS             80..1171
                     /gene="ulaG"
                     /locus_tag="PXF40_001699"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001863918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HDL5803024.1"
                     /translation="MSKIQEITRESWILSTFPEWGTWLNEEIEEEVVPEGNFAMWWLG
                     CVGVWIKTPAGANICMDLWCGRGKSTKKVKDMVRGHQMANMAGVRKLQPNLRAQPMVL
                     DPFAINEVDFILASHYHSDHIDVNVAAAICNNPKLDHVKFVGPWHCAELWKKWGVPEE
                     RIIVVKPGDVVKLKDVEIHALDSFDRTCLVTLPVEGAEERGGELAGLCPSDEEMGRKA
                     VNYVFKTPGGTIYHGADSHYSIQFAKHGKQFDIDVALNNYGENPVGIADKMTSVDLLR
                     MAECLRCKVIIPVHHDIWTNFMASTQEIIDLWRMRKDRLQYQFHPFIWEVGGKYVYPR
                     DKDLIEYHHPRGFDDCFEQEPNIQFKSML"
     gene            1255..2001
                     /gene="ulaR"
                     /locus_tag="PXF40_001700"
     CDS             1255..2001
                     /gene="ulaR"
                     /locus_tag="PXF40_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HDL5803025.1"
                     /translation="MNESYRHKELLALLEERKALSTADIMQLLNISPATARRDISKLD
                     GQGKLKKVRNGAEAILAPTFLQHTKITNNAQEKRRIAEAAGRLCKDGESLILTCGSTM
                     EMLGEVLCGRKLQIITNYLPLANQLIAGCHDDVVIMGGQYNKHKKVMLSINTQNEMTY
                     AATTMFTSGKGLTSEGLFKTDMIIANAEQQMAKHAERYVVLLDSTKLGKKVGMLFKEF
                     DKIDLLITGKEADPTIIQALRNKGLDIILA"
     gene            2056..2916
                     /locus_tag="PXF40_001701"
     CDS             2056..2916
                     /locus_tag="PXF40_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase"
                     /protein_id="HDL5803026.1"
                     /translation="MRKHKLGIYEKALPKNISWQDRLSIAKVCGFDFVEMSIDETDER
                     LARLDWSKKERAKLVKTIINTGVTIPSMCLSGHRRFPFGSCDEATRQKAYEIMEKAIQ
                     LAVDLGIRTIQLAGYDVYYEEQDEGTIQRFQQGLEWAVELAASNQVTIAVEIMDTQFM
                     SSISRWKKWDEIIKSPWFTVYPDLGNLSAWNDNVAEELKLGIDKISAIHLKDTYKVTE
                     TCKGQFRDVPFGDGCVDFAACFKTLAELNYRGAFLIEMWTEKAEEPITEIINARRWIE
                     QKMQEGGFTL"
     gene            2913..3632
                     /locus_tag="PXF40_001702"
     CDS             2913..3632
                     /locus_tag="PXF40_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HDL5803027.1"
                     /translation="MTQLTELTPALQALRERVLKANLELPKYGLVTFTWGNVSEIDRE
                     TGLVAIKPSGVEYDAMTVEDIVLVDLQGNRVYGDKKPSSDTETHLELYRQFTDIGGVV
                     HTHSRNAVGWAQAGRDLLALGTTQGDYFYGAIPCTRKMTAEEIAGSYELETGKVIVET
                     FRTRGIEPKAVPGVLVHSHGPFTWGKDGHDAVHNSVVLEEVAYMNFISHQIRPQIGPM
                     QQELLDKHYLRKHGANAYYGQ"
     gene            3853..6330
                     /locus_tag="PXF40_001703"
     CDS             3853..6330
                     /locus_tag="PXF40_001703"
                     /inference="COORDINATES: protein
                     motif:HMM:NF012311.1,HMM:TIGR02601.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HDL5803028.1"
                     /translation="MYLLEGNQKVKNRNYFVAIATILALSPEVNATELSDQLASRTRY
                     YPSATDSYYSYYKYAPIYSGYYTSNSRNGYSSWYYPGSNAGVTTRTVSTTVNGITVTK
                     VYTTHNGRTTVRTTYAPAVNKPIVNKPTPIANKPVVDTPTQPVIDANPIMDPPVQPIV
                     DNKPITDTQPNPITDNKPVIESPIDDTRPVIIRPTTPVNLHPEPVAVGVPNVGIRWND
                     RSRGYNIDDPNNKQNVKLTGEGVKVGILDSGFKNYLMQDDILKKFGNRAVIIETGRTA
                     PASATHGIEVAEMVGGGNSRNGVASKSTLLLADITKTTNAGTGLSATAPIYYDLWNRG
                     ARIFNQSYGIPKPLTYFNNNRNSSYYYLHQFDGNVLQFYKDKVKEGGLFVWAAGNNRG
                     DLDPSLQAGLPHYEADLEKGWISVVAVATRTNQGLGNFEWSNLLPYSQAGVAKNWTVT
                     AMGDYIFNLGGRNIIASGSSFAAPAVTGTAALVKQKYPWMDGNLIKQSILSTATDIGA
                     PGVDDVYGWGLLNIEKATNGPARFGKRLALADNVTVNIPNGSYEFSNNINGDAGLVKN
                     GQGELILSGASTFEGDTTLNEGAVTINGKKYVSKVNVSPSGTLVVNNTTLENGVNNEG
                     TVVNQGYSTIKRAYVASAQSTLVSDLGSNLNVKGEVDLNGSTLSLAAVKEGKAQYVTQ
                     KGLSMSAITSDSAIKGNFAAIETSGLLTATAEKTNENEVKATVSRKNVATALESSFSA
                     LDNQIEGNNGSTNATNDEFAQQAATLQNSIANINTQSVVLDSLSGQIYASAQALTFEN
                     SETVNKDLSNRLVMLGTLDNVGETAGV"
     gene            6340..7155
                     /locus_tag="PXF40_001704"
     CDS             6340..7155
                     /locus_tag="PXF40_001704"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5803029.1"
                     /translation="MYGNGTLKEIGFGEGKTNTYAGQIGFDKPVTDHVILGAALNYSK
                     AKVNFDRYGGSSKADGIGASLYARIGNKHKTPWYLQGRAGYGSVDSDVERHIILADNN
                     ASTAKINHRDRVFSAYVESGYDFKQGRFALTPFVGFSHDVVRRGAFSEQNSQFGLTAD
                     KATYKQTSGLIGLRTSLEVNLAGMKTTFQGYVNHQKAFNREDLSFKASYTGLQDAKFD
                     VKGIGLAKHKTWVGIGALAEVNKNTSLYVNYDLKLAKNSGHNNVVTAGIRINF"
     gene            complement(7242..8102)
                     /gene="pdxY"
                     /locus_tag="PXF40_001705"
     CDS             complement(7242..8102)
                     /gene="pdxY"
                     /locus_tag="PXF40_001705"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005721193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HDL5803030.1"
                     /translation="MKNILSIQSHVVYGYAGNKASTFPMQLLGVDVWALNTVQFSNHT
                     QYGKWGGMVMPKEQIGSIVDGIHNIGELHRCDAVLSGYIGSAEQVAEIIQAFHKVKAE
                     NPNAIYVCDPVMGHPDKGCIVADGVKEGLINLAMAQADIITPNLVELRELTGLTVENF
                     EQAVEAVKVILTKGPKKVLVKHLSRVGKESNKFEMLFANQDGIWHISRPLYQFAKEPV
                     GVGDLTAGLFVANLLNGKSDLEAFEHTANAVNEVMEQTARSGLYELQIIASRDRIVNP
                     QCSYQAVKIA"
     gene            8221..8296
                     /locus_tag="PXF40_001706"
     tRNA            8221..8296
                     /locus_tag="PXF40_001706"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8254..8256,aa:Thr,seq:tgt)
     gene            complement(8391..9344)
                     /gene="accA"
                     /locus_tag="PXF40_001707"
     CDS             complement(8391..9344)
                     /gene="accA"
                     /locus_tag="PXF40_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HDL5803031.1"
                     /translation="MSQEFLDFELPIAELEAKIESLRAVSEQDDKINLDDEIKRLQKK
                     SEELTKKTFANLDAWQISRMARHPNRPYTLDYIEHIFTEFDELAGDRAFADDKAIVGG
                     IARLDGRPVMVIGHQKGRTVKEKVKRNFGMPAPEGYRKALRLMEMAERFNMPIITFID
                     TPGAYPGIGAEERGQSEAIARNLREMSQLSVPVICTVIGEGGSGGALAIGVGDKVNML
                     QYSTYSVISPEGCASILWKSADKASTAAEVMGLTAPRLKELELIDNIVPEPLGGAHRN
                     VEQIAQNLKQRIVEDLAGLDQLNKEDLLERRYQRLMNYGYV"
     gene            complement(9398..10822)
                     /locus_tag="PXF40_001708"
     CDS             complement(9398..10822)
                     /locus_tag="PXF40_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HDL5803032.1"
                     /translation="MKKQITRRQFLQGSALAAGFATVPTPLLAAERPQLNIPPLMDIG
                     RGKPVRLDLRPAQTQFDKGKLVDVWGVNGQYLAPTVRVKSGDFVKLTYLNNLPQKISM
                     NIQGLQASSEMIGTVHRSLDPKSSWSPIVSINQPACTCWYHADTMLNSAFQVYRGLAG
                     LWMIEDEQSKKATLPNKYGVNDIPLILQDQLLNKDGVQVLDKNTSQFFGKRLFVNGQE
                     SPYFNVPRGWVRLRIVNASLSRAYELRLDNEQPLYLIATGLGMLAEPLETESVQLAPS
                     ERVEVLVDLSEGKAVSLISGQKRDIFYKIGQVFADNDELNDNVILELRPEGMAAVLNN
                     KPSLPAFNLEEFNLKISQERRFAIRPADYLINQKRFDPKRIDFTAQKGSVERWYLHST
                     QAVGFTLQGAKFIIETLNRKQYPIKQLAWRDTVWLEAEQEITLLVRFDNTAPEQLPFT
                     FGVSDFMLRDRGTMGQFSVIENGQ"
     gene            complement(10824..11558)
                     /locus_tag="PXF40_001709"
     CDS             complement(10824..11558)
                     /locus_tag="PXF40_001709"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HDL5803033.1"
                     /translation="MLKIFRILIVALAAIFISIFGTIYALLRLRHPSSVGVVARWFGA
                     LHKLVGLELITRKKPEINYPVVYIGNHQNNYDMVTISSMVAEKTVSIGKKSLIWIPFF
                     GLVYWATGNIFIHREKRSSAIETMNKAGQIVKERNVSVWMFPEGTRSRGRGLLPFKTG
                     AFHLAISAGVPIVPVVCSNLHNKVDLNRSNNGTVICEMLDPIDTSGYSRENVKELMEK
                     CHQIMLAKFEQLNQEVEQLENTAKNA"
     gene            11705..12202
                     /gene="tpx"
                     /locus_tag="PXF40_001710"
     CDS             11705..12202
                     /gene="tpx"
                     /locus_tag="PXF40_001710"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005578656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HDL5803034.1"
                     /translation="MSKVTLAGSPIDVAGTFPQKGDVVADFTLVNSDLSDVSLSDFDG
                     KRKVLNIFPSIDTGICATSVRVFNQKAADVANTVVLCISADLPFAQARFCGAEGIENA
                     KVLSSFRHRDLHNKLGVDIISGPLAGLTSRSVIVLDENNKVLHSELVPEIKQEPDYEA
                     ALAVL"
     gene            complement(12287..13912)
                     /gene="yidC"
                     /locus_tag="PXF40_001711"
     CDS             complement(12287..13912)
                     /gene="yidC"
                     /locus_tag="PXF40_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HDL5803035.1"
                     /translation="MNNRGLLLMGLFLVSILIFTQWQQDFDPEIQAQKQAQVAAQTQQ
                     AGDLPSASNANNPIADSITQGKTITVESDVLRLTIDTLGGDVIGSDLLKHNAELHSNT
                     PFKLLQQDGDKIYVAQSGLVGKNGIDTNAGRPQYAVTADSFKLAEGQNEISVPLTFEK
                     EGVVYTKTFTLKRGSYDVGVNFNIKNNTAQAIEVQPYGQLKHSIVESSGNLTMPTYTG
                     GAYSSSETNYKKYSFQDMEKANLSVDTKAGWIAVLQHYFVSAWVPNQDADNSLYSRTN
                     NGVATIGYRGPLTTIAPNSEANLNSKLWTGSKDQKEMGESANHLDLTVDYGWAWFIAK
                     PLFWLLTAIQKIVSNWGLAIIGVTIVVKTILYPLTKAQYTSMAKMRMLQPRITEMRER
                     FGDDRQRMSQEMMKLYREEKVNPMGGCLPILIQMPIFIALYWTFMEAVELRHAPFFGW
                     IQDLSAQDPYYILPLLMGGSMFLLQKMSPTPVADPVQQKVMTFMPVIFTVFFLWFPSG
                     LVLYWLTSNLITIAQQWLIYRNLEKKGLHSRKK"
     gene            complement(14065..14490)
                     /locus_tag="PXF40_001712"
     CDS             complement(14065..14490)
                     /locus_tag="PXF40_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog fold thioesterase"
                     /protein_id="HDL5803036.1"
                     /translation="MTIWKQTATCEQLNTLSQKSAVSHLGIEFTAIGEDWIEAQLQVD
                     ERTQQPFGVLHGGVSAALAETTANAGALMVCEPHQIAVGMELNISHLKSIPAGTKAIA
                     KATPLKLGREVQVWNIDIKDEQGNLCAVARLSTKTLDKR"
     gene            complement(14819..17911)
                     /locus_tag="PXF40_001713"
     CDS             complement(14819..17911)
                     /locus_tag="PXF40_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HDL5803037.1"
                     /translation="MIPRLSEVPQLDKATQSYLTELVNQHFSGEIASNYADRLSLATD
                     NSVYQQIPQAILFPKSVSDVVILTKLAQKPEYQHLTFTPRGGGTGTNGQSLNNNIIVD
                     LSRHMNQILELNVEERWVRVQAGVVKDQLNQFLKPHGLFFSPELSTSNRATLGGMINT
                     DASGQGSLQYGKTSDHILAIKSVLINGDILETQAVKSADFFAHIEGLNLSALGKTLHR
                     EIFNRCKTLRPKVLNELPQLNRFITGYDLKNVFNHGESEFNLTRILTGSEGSLAFICE
                     AKLNLLPIPKYRTLINIKYNSFDAALRSAPFMLEAKALSVETVDSKVLNLAKQDIVWH
                     SVSDLLTEDPANPILGINIVEYASSDQTQIETQVKALCQSLDQKMANNEAGIIGYQLT
                     SDVNSIEKIYAMRKKAVGLLGNAKGWAKPIAFVEDTAVPPENLADYIVEFRALLDRYN
                     LPYGMFGHVDAGVLHVRPALDLCDKAQVETFKQISDQVVELTAKYGGLIWGEHGKGMR
                     SYYGERFFGETLWQELRYIKTLFDPYNRLNPGKICTPLESETSLYPIDSQMRADFDRQ
                     IPIQVREEFKGAMNCNGNGLCFNFDVHSTMCPSMKVSGNRLYSPKGRATLVREWLRLL
                     TEQNVSPDDLIFKPRKQAVKLADFVAKIRNTLNKNKEYDFSHEVKAAMDTCLACKACA
                     SQCPIKIDVPTFRSQFNELYHSRYLRPLKDYVVSNLEFIAPLMAKQPRFFNFFSTSTF
                     AEKAANKTIGMTYLPALSVPNLQHQLVEVGYQGESLESLEQQATSGDFSAKNCKTLFI
                     VQDPFTSYYDAKVVADFIALIKKLGFKPIVLPFKPSGKAQHVKGFLHKFAKTAKNQAD
                     FLNRVAKLGLPMVAVDPALTLLYREEYKEILKEARGDFKVLLAHEWLREVIKNGELEN
                     CKKSANSDRLPWYLFAHCTESTALPSSMKEWQAIFTHFGETLLNENVGCCGMAGTFGH
                     ETKHVEMSKAIYQQSWQIKLKNKPLERCLATGYSCRSQVKRFEQQGIKHPIQALLDVI
                     "
BASE COUNT         5170 a         3651 c         3952 g         5334 t
ORIGIN      
        1 agatgtacaa atttttgtga ttgtttatga ttggttttga ttgcattgtt cttattttag
       61 cgtaaatcag gagactatta tgagcaaaat tcaagaaatc actcgtgaaa gctggatcct
      121 ttcaactttc cctgaatggg gtacttggtt gaatgaagaa attgaagaag aagttgtacc
      181 ggaaggcaat tttgcaatgt ggtggctagg ctgtgtcggt gtgtggatta aaaccccagc
      241 tggtgcgaat atctgtatgg atttatggtg cggtcgtggt aaatccacca agaaagtaaa
      301 agatatggtg cgtggtcatc aaatggcaaa tatggcaggg gtgcgtaagc tccagcctaa
      361 tttgcgggct caaccgatgg tgttagatcc gtttgcgatt aacgaagtgg acttcattct
      421 cgcttctcac tatcactcag accatattga tgtaaacgtg gcagcggcta tttgcaataa
      481 cccgaaatta gaccacgtta aatttgtcgg cccttggcac tgtgcagaat tatggaaaaa
      541 atggggcgtg ccggaagaac gtattattgt ggtaaaaccg ggcgatgtcg tgaaattaaa
      601 agatgtagaa attcacgccc tagattcatt tgaccgtacc tgtttagtga ccttaccggt
      661 agaaggtgca gaagaacgtg gcggagaact tgcaggctta tgcccatcag atgaagaaat
      721 gggacgcaaa gcggtgaact atgtgttcaa aaccccgggc ggtacgattt atcacggtgc
      781 agattctcac tactcaatcc aattcgctaa acacggtaag caatttgata ttgacgtagc
      841 gctgaataac tatggcgaaa acccggttgg tattgcggat aaaatgactt cagttgattt
      901 attacgtatg gcggagtgtt tacgctgtaa agtgattatt ccggttcacc atgatatttg
      961 gacaaacttt atggcaagta cgcaagaaat tattgattta tggcgtatgc gtaaagatcg
     1021 cttacaatac caattccacc catttatttg ggaagtgggc ggcaaatatg tttacccacg
     1081 tgataaagac ttaattgaat atcatcaccc tcgcggcttt gatgactgct tcgagcaaga
     1141 gccaaatatt caatttaaat ccatgctata ggtgagcagt cgccactctc actggagagt
     1201 ggcgttttag caagttcatt atggagcagt agtgattagt aatgggataa agtagtgaac
     1261 gaaagttata gacacaaaga gttattagcc ctgttggaag agcggaaagc actgtcaaca
     1321 gcagatatta tgcagctgtt aaatatttct ccggcaacag caagacgtga tatcagtaaa
     1381 ttagatggtc aaggtaaatt aaaaaaggtt agaaacggag cagaagcaat tctggctcct
     1441 acatttttac agcacacaaa aataactaac aatgcgcagg agaaacgtag aatagcggaa
     1501 gctgccggtc gtttatgtaa agatggggaa agtcttattc tgacgtgtgg ttccacaatg
     1561 gaaatgctcg gtgaagtatt atgtggtaga aaattgcaaa ttattaccaa ttatctaccg
     1621 cttgcaaacc agttgattgc aggttgccac gatgatgtag tgattatggg tgggcaatat
     1681 aataaacata aaaaagtgat gctctcaatt aacacccaaa atgagatgac ttatgccgct
     1741 accacaatgt ttaccagtgg caaaggctta accagcgaag gattatttaa aaccgatatg
     1801 attattgcca atgccgagca acaaatggca aagcacgcag aacgttatgt ggtgttattg
     1861 gatagcacca agctcggcaa aaaagtcggt atgctgttta aagagttcga taaaattgat
     1921 ttattgatta ccggcaaaga ggcggatccg actattatcc aagcattaag aaacaaaggc
     1981 ctggatatta tcttggctta gcctgtagcg gtcaaattta atcaaaattt tacttatcat
     2041 cttcaaggga aaactatgag aaaacataaa ctgggtattt acgaaaaggc cttgccgaaa
     2101 aacatttcgt ggcaagaccg cctttctatc gccaaagtct gcggttttga ctttgtggaa
     2161 atgtcgattg acgaaacgga cgaacgctta gcccgccttg attggagcaa aaaagaacgt
     2221 gccaagctgg tgaaaaccat catcaacacc ggcgtgacca ttccgtcaat gtgcttgtcc
     2281 ggtcatcgcc gtttcccgtt tggttcttgt gatgaagcga cccgccaaaa agcctatgaa
     2341 attatggaaa aagccattca actggcggtc gatctcggta ttcgcaccat tcagcttgcc
     2401 ggctatgacg tctattacga agagcaggac gaaggcacaa tccaacgctt ccaacaaggc
     2461 ttagaatggg cggtggagct ggcggcaagc aaccaagtta ccattgcggt ggaaattatg
     2521 gacacccaat ttatgagttc gatttcccgc tggaaaaaat gggacgagat catcaaatca
     2581 ccgtggttca ccgtgtatcc agatttaggc aacctctcag cgtggaacga caacgtagcg
     2641 gaagagctga aactcggcat cgacaaaatc tctgccattc acttaaaaga cacttacaaa
     2701 gtgactgaaa cctgcaaagg gcagttccgt gatgtgccat ttggtgacgg ttgcgtagat
     2761 ttcgccgctt gttttaaaac ccttgccgag ctgaattacc gtggcgcatt cttaattgaa
     2821 atgtggacgg aaaaagccga agagccgatt actgaaatca tcaacgcccg ccgttggatc
     2881 gaacaaaaaa tgcaagaagg aggatttacc ctatgacgca attaactgaa ttaacccctg
     2941 cattacaagc cttaagagag cgtgtgttaa aagccaattt agaattaccg aagtatggct
     3001 tggtaacttt cacttggggt aacgtaagtg aaatcgaccg tgagaccggt ttagtcgcca
     3061 tcaaaccttc cggcgtagaa tacgatgcga tgacggtgga agacattgta ttggttgatt
     3121 tacaaggtaa tcgagtttac ggagataaaa aaccgtcttc tgatacagaa acgcacttag
     3181 aactttatcg ccaattcact gatattggcg gtgtggtaca cactcactct cgcaatgctg
     3241 taggttgggc acaagcaggg cgtgatttat tggcacttgg caccactcaa ggcgattatt
     3301 tctacggtgc gattccttgt actcgcaaaa tgaccgcaga ggaaattgcc ggcagttatg
     3361 agctggaaac cggaaaggtg attgtcgaaa ctttccgaac tcgaggtatt gaaccgaaag
     3421 cagttccagg tgtgttggta cattcacacg gtccatttac ctggggaaaa gatggacacg
     3481 atgctgtgca taattctgtg gtattagaag aggtggctta catgaatttt attagccatc
     3541 aaattcgccc acaaattggc ccaatgcaac aggaattatt agataagcat tatctgcgta
     3601 agcatggtgc aaatgcttat tatgggcaat agctaataac ctaaaaatta ttttccaaat
     3661 tatcaacagc tttcgagggg ctttctataa tcggaatagc tcctcagtct gtttgagttt
     3721 atggatagat ccacaaataa ttaccatttt ccttttcttg attttaattt tgatttttgt
     3781 tctaatctct gcctcttgtt tttacaagtc tattaaggat ccgtagtaga tttgaaataa
     3841 acaagagtat ctttgtattt attagaagga aaccaaaagg tgaaaaatag aaattatttt
     3901 gttgcaatag caacaatatt agccttatcg ccagaggtta acgcaactga actttcagat
     3961 cagcttgcaa gtagaacaag atattatcct tccgccacgg atagttatta tagttactat
     4021 aaatatgcac cgatttattc gggctactat acatcgaata gccgtaatgg ttattcgtcg
     4081 tggtattatc caggtagcaa tgcaggtgta acaaccagaa ctgtttcgac aacagttaat
     4141 ggcattacag ttacaaaagt ttatacaacg cataatggga gaacaaccgt tcgtaccact
     4201 tatgctcctg ctgtgaacaa accaattgta aataaaccga caccgattgc caataaaccc
     4261 gttgtagata cgccaactca accggttatt gatgccaacc caattatgga tccgccagtc
     4321 caaccaatag ttgataataa acccatcact gatacacagc ctaatccaat tacagataac
     4381 aaacctgtca ttgaatcgcc aattgatgac acccgtccag ttatcattag gcctacaaca
     4441 ccggtaaatc ttcatcctga acctgtagct gttggtgtac ccaatgtagg tattcgatgg
     4501 aatgaccgct ctcgtggtta caacattgat gatcctaata acaaacaaaa tgttaagtta
     4561 actggtgaag gtgttaaagt cggtatctta gatagtggtt ttaaaaacta tttaatgcag
     4621 gacgatatac tcaaaaaatt tggtaatcgc gctgttatta ttgaaacagg gcgtactgcc
     4681 ccggcttctg caacacatgg tattgaggtc gcagaaatgg ttgggggagg gaactctcgc
     4741 aatggagtag cgtctaagtc aacgttatta cttgcggata ttaccaaaac aacaaatgcg
     4801 ggtacaggat tatccgcaac agctccaatt tattatgact tatggaatag gggagcccgt
     4861 atttttaacc aatcatacgg tattccaaag cctcttactt attttaataa caatagaaat
     4921 tctagctatt actatttaca ccaatttgat ggtaatgtgt tgcaattcta taaggataaa
     4981 gtaaaagagg ggggcttatt tgtctgggct gcggggaata accgtggtga tcttgatcca
     5041 tcactccaag ctgggttacc tcattatgaa gctgacttgg aaaaaggttg gatttctgtt
     5101 gttgcggtag caaccagaac taatcaggga ttgggtaact ttgaatggag caatttattg
     5161 ccatattctc aagccggtgt ggcaaaaaat tggaccgtta ccgcaatggg tgactacatc
     5221 tttaatttag gaggtagaaa cattattgct agtggttcat cctttgcagc tccagccgtt
     5281 acgggtacag cagctctcgt gaaacaaaaa tatccttgga tggatggtaa ccttatcaaa
     5341 caatctattc tctcgacggc aaccgatatc ggcgctcctg gagttgatga tgtatatgga
     5401 tggggtttac ttaatattga aaaagccact aatggccctg cgcgttttgg taaacgactc
     5461 gctttagccg ataacgtgac tgtaaatatt ccaaatggaa gctatgagtt ttccaataat
     5521 attaacggtg atgcaggctt ggtgaaaaat ggccaaggcg aattaatttt atcgggtgct
     5581 agtacttttg aaggggatac aacactcaat gaaggtgctg tcactattaa cggtaaaaaa
     5641 tatgtgtcta aagtaaacgt atctccaagt ggtacattgg ttgtcaataa taccacgtta
     5701 gaaaatggcg taaataacga gggtacagtt gtcaaccagg gttattctac gattaagaga
     5761 gcttacgttg cttcagcaca aagtacgcta gtgtcagatt taggttcaaa cttaaatgta
     5821 aaaggagaag ttgacttaaa cggctctact ttatcactag ctgcggtaaa agagggtaaa
     5881 gctcagtatg tgacccaaaa aggtttatca atgagtgcta ttacttctga ttccgcaatt
     5941 aagggtaact ttgctgcaat agaaacctca gggttattaa ctgcgacggc ggaaaaaacc
     6001 aatgagaatg aagtaaaagc aacagttagc cggaaaaatg tcgcgactgc tttagagagc
     6061 tcattttcgg cattggataa ccaaattgaa ggaaataatg gttctacaaa tgctacaaat
     6121 gatgaattcg cacaacaagc ggctacttta caaaacagta ttgcaaacat caatacgcaa
     6181 agtgtggttt tagatagctt atctggtcaa atttatgcgt ctgcgcaagc gcttactttt
     6241 gaaaactcag aaacagtgaa taaagatctc tctaaccgtc ttgtaatgtt aggaacgctg
     6301 gataatgtag gtgagactgc tggtgtgtga gtaacgggta tttatgggaa tggtactcta
     6361 aaagaaatag ggtttggtga aggtaaaacc aatacctatg ctggccaaat aggttttgat
     6421 aagccagtta cagaccatgt gattttaggt gcggcactta attattctaa agcaaaagtg
     6481 aacttcgatc gttatggcgg tagttcaaaa gcagatggaa taggtgcatc attatatgcc
     6541 cgtataggca ataagcataa aacaccttgg tatttacaag gtcgagccgg ttatggcagt
     6601 gttgattcag atgtagagcg tcatattatt ttggcggata ataacgcaag tacagcaaaa
     6661 atcaaccacc gagacagagt attttctgct tatgttgaat caggctatga cttcaagcaa
     6721 ggtcgctttg cgttaactcc atttgtcggt tttagtcatg atgttgtcag acgtggcgca
     6781 ttcagtgagc aaaacagtca atttggtctc accgcggaca aagcaaccta taaacaaaca
     6841 agcggattga ttggtttacg aacatcttta gaggtgaatt tagctgggat gaaaacgact
     6901 ttccaaggct atgtaaatca tcaaaaagcg tttaatcgag aagatcttag ctttaaagca
     6961 agttatacag gtttacaaga tgcaaaattc gacgtaaaag gtattgggct tgcaaaacat
     7021 aaaacgtggg tagggattgg tgcattggcg gaagtaaata aaaatacttc cttatatgtg
     7081 aattacgacc ttaaactcgc aaaaaatagt ggtcacaaca acgttgtgac tgctgggatt
     7141 agaattaatt tctaactgaa tctttttaaa caaaacgggc gtttatacgc ccgttttttt
     7201 atagttatag agataataat gttattttat acttcattta attaggcaat ctttacagct
     7261 tggtaactac actgtggatt aacaatccga tcacgagaag caataatttg taactcataa
     7321 agccctgatc tagcggtttg ttccattacc tcattgaccg catttgcagt gtgttcaaag
     7381 gcttctagat cggattttcc atttaataag ttcgccacaa atagccctgc ggttaaatcg
     7441 cctacaccga caggttcttt ggcaaattgg tagagtgggc ggctgatgtg ccaaatgcca
     7501 tcttggttgg cgaacagcat ttcaaatttg ttgctctctt tgccgactcg gcttaaatgt
     7561 ttaaccaata cttttttcgg gcctttggtt aaaatcactt tcactgcctc gaccgcttgc
     7621 tcaaaatttt ccaccgttaa accggttaat tctcttaatt ccactaaatt tggtgtgata
     7681 atgtcggctt gtgccattgc cagattgatc aatccctctt ttacgccgtc tgccacaatg
     7741 cagcctttgt cggggtgtcc cattaccggg tcgcatacat aaattgcgtt tggattttcc
     7801 gctttcactt tatgaaaagc ctgaataatt tcggctactt gttctgccga gccgatatag
     7861 ccagagagta cggcatcgca acgatgcagt tcaccgatat tgtgaatgcc atcaacaatg
     7921 ctaccgattt gttcttttgg catcaccata ccgccccatt ttccatattg ggtatggttg
     7981 gaaaactgta cggtatttaa cgcccataca tcaacaccta acagctgcat aggaaaagtt
     8041 gaagccttat tgccggcata gccgtagaca acgtgcgatt gtatggatag tatgtttttc
     8101 attcattcac tcctttaaaa tttcaatatg tgttgttttt tagtcatttg aagttgcaag
     8161 gacttgaagc tcatcaagaa atctctataa tcccgcctcg ttctcttatc cattcaatat
     8221 gccgacttag ctcagtaggt agagcaactg acttgtaatc agtaggtcac cagttcgatt
     8281 ccggtagtcg gcaccatcac ctttattttc tgatgagtcc cctttaatgt aaaatggcaa
     8341 gattttgcaa attttcacaa aaatcttacc gcttgtaggg tgaaattgaa ttagacgtaa
     8401 ccgtaattca ttaagcgttg ataacggcgt tccagtaaat cctctttatt aagttgatct
     8461 aaccctgcca aatcttcaac aatacgctgt ttaaggtttt gggcgatttg ttcaacattg
     8521 cgatgagcac cgcctaaggg ttccggcacg atgttatcaa tcagctcaag ctcttttaaa
     8581 cgaggggcag ttaaacccat tacttctgct gccgttgagg ctttatcggc acttttccac
     8641 agaatcgagg cacagccttc aggtgaaatt accgagtaag ttgaatattg caacatattg
     8701 accttatcgc ccacaccgat cgctaatgca ccgcccgagc caccttcgcc aattaccgta
     8761 cagattactg gcacggaaag ttgagacatt tcacgcaggt tacgggcaat cgcttctgac
     8821 tgaccacgct cttccgcacc aatgcccgga taagctcccg gtgtgtcgat aaaggtgatg
     8881 attggcatat taaagcgttc tgccatttcc attaaacgta acgctttgcg atagccttca
     8941 ggagcaggca taccaaagtt acgtttcact ttctctttta cggtacgacc tttctgatga
     9001 ccgataacca tcaccggacg tccgtccaga cgggcaatac caccgacaat cgctttatca
     9061 tcggcaaagg cacggtcgcc tgccagttcg tcaaattcgg tgaaaatatg ctcaatataa
     9121 tctaaagtgt acgggcgatt ggggtggcgt gccatacggg aaatttgcca cgcatctaaa
     9181 ttagcaaagg ttttcttggt taattcctcg cttttctttt gtaaacgctt gatttcatca
     9241 tcaagattaa ttttgtcatc ttgctcgctg actgctctta aagactcgat cttggcttcc
     9301 aattcagcaa tcggcaattc aaaatctaaa aattcttggc tcattctatt ttccttttta
     9361 tgggcaaaat tatggggcat tatcgcttat cagtcggtta ttgtccattt tcaattacgc
     9421 taaattgacc catcgtacct ctatcacgca gcataaaatc gctcacgcca aaggtaaatg
     9481 gcagttgctc aggggcagta ttatcaaagc gaaccaacag cgtgatttct tgctccgcct
     9541 cgagccaaac ggtgtcccgc cacgcaagtt gtttgatagg gtattgcttg cggtttaggg
     9601 tttcaataat gaattttgca ccttgtagcg taaatccgac cgcttgtgtg ctatgtaaat
     9661 accaacgctc aacgctgcct ttttgcgcgg taaaatcaat gcgttttggg tcaaaccgct
     9721 tttggttgat taaataatca gccggacgaa tggcaaaacg tctctcttgg ctgattttca
     9781 ggttaaattc ctctaagttg aaagccggta aactcggttt attattcaat accgctgcca
     9841 ttccttcagg gcgaagctct aaaatcacgt tatcattcaa ttcgtcgttg tcagcaaaga
     9901 cctgcccgat tttgtaaaaa atatctcttt tttgaccgct tatcagcgat accgctttcc
     9961 cttcgcttaa atcgaccaac acttccaccc tttcactcgg tgcaagttga accgattcgg
    10021 tttcaagtgg ctctgccagc attcctaagc cggtggcgat taggtacaac ggctgctcgt
    10081 tatctaagcg taattcataa gcacgggaaa gtgaggcatt gacgatccgc aatctgaccc
    10141 agccacgagg cacgttaaaa taaggcgatt cctgcccgtt gacaaataat cgcttaccga
    10201 aaaattgtga ggtgttttta tctaacacct gtacgccgtc tttgttgagc agctggtctt
    10261 gcagaattaa cggaatgtcg ttcacgccat atttattcgg taaagtggct tttttgctct
    10321 gttcatcttc aatcatccac aagccggcta agccacgata cacttggaat gccgagttga
    10381 gcattgtatc ggcgtgatac caacaagtac aagccggttg attgatagaa acaatcggcg
    10441 accagctact tttggggtca agggaacgat gcaccgtgcc aatcatctca cttgaggctt
    10501 gcaatccttg aatattcatt gagatttttt gcggtaaatt attgagataa gttaatttga
    10561 caaaatcccc cgattttacc cgtacggttg gggcaagata ttgcccgttc acaccccata
    10621 catcaaccaa tttgccttta tcaaattggg tttgtgcggg gcgtaaatcc aaccgaaccg
    10681 gctttcctcg cccaatatcc attaaaggcg gaatgttcag ttgcggtcgc tctgctgcta
    10741 atagcggtgt tggcactgtt gcaaatccag ccgcaagggc agagccttgt aaaaattggc
    10801 gtcgggtgat ctgttttttc atattaggcg ttttttgcag tgttttctaa ctgttcgact
    10861 tcttgattaa gttgttcaaa ttttgccaac ataatttgat ggcacttttc catcagttct
    10921 ttgacgtttt cacgggaata gcctgaagta tcaatcggat caagcatttc acagattact
    10981 gtgccgttat ttgaacggtt caaatccact ttattgtgta aattagagca aactaccggc
    11041 acaatcggca cgccggcaga aatggctaaa tggaatgcac cggttttaaa tggcagtaaa
    11101 ccacgcccac ggctacgagt accttccggg aacatccaca ccgacacatt gcgttctttc
    11161 acgatttgcc ctgctttatt cattgtttca atcgcactgg aacgcttttc acggtgaata
    11221 aaaatattgc cggttgccca gtaaaccaaa ccgaaaaacg gaatccaaat caggcttttt
    11281 ttgccgatac tcaccgtctt ttctgccacc attgaggaaa tcgttaccat atcgtaattg
    11341 ttttgatgat tgccgatata gacaaccgga tagttaattt ccggcttttt gcgggtaatt
    11401 aattccaacc cgactaattt atgcaaagca ccaaaccaac gagctaccac acccacgcta
    11461 cttgggtgac gtaaacgcag taacgcataa atagtgccaa aaatagaaat gaaaatagcg
    11521 gcaagggcaa caattaaaat acgaaaaatt tttaacataa tggaataacc ttaaaaataa
    11581 attgtctagg agtatagcaa aataaggtta ttttctaaag gctatccaca ttaaattgat
    11641 agtttcctat tttgcaaaaa atcggtatat ttaaaccgct tgtttatttg ataaggagaa
    11701 aaaaatgagt aaagtgactt tagcaggaag cccgattgat gttgcaggca catttccaca
    11761 aaaaggcgat gtggttgccg attttacctt agtcaacagt gatttaagtg atgtttcgct
    11821 ttccgatttt gatggcaaac gcaaagtgtt aaatattttc ccaagtattg acaccggcat
    11881 ttgtgccact tctgtgcgtg tgtttaatca aaaagcggct gatgtagcga atacggttgt
    11941 cctttgtatt tcagcggatt taccttttgc ccaagcacgt ttctgtggag cagaaggaat
    12001 tgaaaatgcc aaagtattat ccagtttccg tcatcgtgat ttacacaaca aactgggggt
    12061 agatattatt tcaggtccgt tggcaggctt aacttcacgt tcagtaattg tgttagatga
    12121 aaacaacaag gtattacaca gcgaattagt gccggaaatt aaacaagagc cggattatga
    12181 ggcggcgtta gcggtattat aatttgcaga attatgctgg aaaataaccg cttgtaaagc
    12241 aacaaaaagc ccgttgattc aattcaacgg gctttgtttt tagtgattat ttcttacgag
    12301 agtgtaagcc ttttttctca aggttacggt aaatcaacca ttgctgtgca atcgtgatta
    12361 agtttgaggt taaccagtaa agcactaagc ctgatgggaa ccataagaag aacacggtaa
    12421 agataaccgg cataaaggtc attacttttt gttgtaccgg gtcagctacc ggtgttggcg
    12481 acattttttg taacaagaac atcgaaccac ccattaataa aggcaaaatg tagtatgggt
    12541 cttgtgccga taagtcttga atccagccga agaaaggtgc gtggcgtaat tctaccgctt
    12601 ccataaatgt ccaatataaa gcaatgaaaa tcggcatttg gattaaaatt ggtaagcagc
    12661 cacccattgg gttcactttt tcttctctgt agagtttcat catctcttgg ctcatacgtt
    12721 ggcggtcgtc gccgaaacgt tcacgcattt cagtaatgcg aggttgtaac atacgcattt
    12781 ttgccatcga ggtgtattgt gctttggtta atgggtaaag aatggttttc actacaatag
    12841 tgacaccgat aattgccaag ccccagttgc ttacgatttt ttgaattgcg gttagtaacc
    12901 agaaaagcgg tttagcgata aaccacgccc agccgtaatc tacggttaag tctaggtgat
    12961 ttgctgattc gcccatttct ttctgatctt tagaacctgt ccaaagtttg ctatttaaat
    13021 tagcctctga atttggcgca atcgtagtta aagggccacg gtaaccgata gttgctaccc
    13081 cattattggt gcgtgaataa aggctgttat ccgcatcttg gtttggcacc caagcagaca
    13141 cgaaatagtg ctgtaatacc gcaatccaac ccgctttggt gtccacgctt aagttggctt
    13201 tttccatatc ttggaaactg tattttttgt agttggtttc tgaagaagaa taagccccgc
    13261 cggtgtaagt cggcatggtt aaattgccgg aactttcaac tatagagtgt tttaattgcc
    13321 cgtaaggctg aacttcaatc gcttgtgcag tattattttt gatattgaag tttaccccaa
    13381 catcgtagct accacgtttt agcgtgaaag ttttggtgta aaccacaccc tctttttcaa
    13441 aggttaatgg tacagaaatt tcattttgcc cttcggctaa tttgaagcta tctgccgtta
    13501 ccgcatattg tgggcgaccg gcattggtat caatcccgtt tttacccact aaaccgcttt
    13561 gagcaacgta gattttgtcg ccgtcttgct gtaatagttt aaatggcgtg ttagagtgta
    13621 attcagcatt gtgttttaac aaatctgagc cgatgacatc accgcctaag gtatcaatag
    13681 tcagacgtaa tacatcgctt tccacggtaa tggttttacc ttgcgtgatg ctatctgcga
    13741 ttggattatt ggcattggaa gcagacggaa gatcacccgc ttgttgggtt tgtgctgcca
    13801 cttgagcttg tttttgtgct tgaatttcag gatcaaaatc ttgttgccat tgtgtaaaaa
    13861 tcaaaataga cacaagaaat aaacccatta gcagtaagcc acgattattc atgttggaat
    13921 tctcttgtta gtaatggata aaaagaaagg tattttataa taggttagct tgttttccaa
    13981 acgcctttta tgaacaagcg gtcggatttt ccaagttttt tgcaaaattt tcggagaatt
    14041 tgaccgcttg tggagaataa gaaactagcg tttatctaag gttttggtgg aaaggcgagc
    14101 aactgcacac aggttacctt gttcgtcttt aatgtcgata ttccaaacct gtacttcacg
    14161 ccctaatttc agcggtgtag ctttggcaat cgcttttgtg cctgccggaa tcgattttaa
    14221 atggctgatg tttagctcca ttcccaccgc aatttgatgg ggttcacaca ccattaacgc
    14281 ccctgcattg gcagtagttt ccgcgagtgc tgccgataca ccgccgtgca atacgccaaa
    14341 cggctgttga gtgcgttcgt ccacctgaag ctgtgcttca atccaatctt caccgatagc
    14401 ggtaaattca atccctaagt gtgacaccgc cgatttttgg ctgagtgtgt ttaattgttc
    14461 acaagttgct gtttgcttcc aaatggtcat tattatttcc tgtctaataa aaaagctgtc
    14521 tatttagaca gctttcatta tctctttgag cgaaacatac tacgccaata gtacattgtt
    14581 tggtcgccca tattacctta agccatatag cactaaggag gtgatttatg tgagaaaatc
    14641 agaagttttc tttctggttg cgttgctaat attattagca acttccgcta gcattaaagt
    14701 actcaccata cttgatgtgc tagtttggtt attcgctaga taacctaaaa tcagacagag
    14761 gcaggctggt tacctgcctc gctttttatt ctaagtactt ttaggttaca tttcaacctt
    14821 aaatcacgtc cagcaacgct tgaattgggt gtttaatgcc ttgttgttca aaacgtttga
    14881 cttgcgagcg gcaggagtag ccggttgcta ggcaacgctc aagcggttta ttttttaatt
    14941 taatttgcca tgattgctga taaatcgctt tcgacatttc aacgtgtttg gtttcgtgtc
    15001 cgaacgtgcc tgccattcca cagcaaccga cattttcatt gagtaaggtt tcaccaaaat
    15061 gggtgaaaat agcttgccac tctttcattg agcttggcaa ggcggtggat tcggtgcagt
    15121 gagcaaataa ataccacggc aagcggtcgg aatttgccga ttttttgcaa ttttccagct
    15181 cgccgttttt aatcacttcc cttaaccatt cgtgtgccaa taagactttg aaatcccccc
    15241 gagcttcttt gaggatctct ttgtattctt cacgataaag caaagttaag gcaggatcga
    15301 cagccaccat cggtagcccc aatttcgcca cacggtttaa aaaatcggct tggtttttcg
    15361 ctgttttcgc aaatttatgc aaaaagcctt taacgtgttg tgctttaccg cttggcttga
    15421 atggcaacac aatcggctta aagcctaatt ttttaatgag agcgataaag tctgccacca
    15481 ctttggcatc gtaataagag gtaaacggat cttgcacaat aaacaaggtt ttgcaatttt
    15541 ttgcagaaaa atcaccgctt gtagcttgtt gttcaaggct ttctaagctc tcgccttggt
    15601 agccgacttc caccaactga tgttgcagat ttggcactga caatgccggc aaataggtca
    15661 ttccaatggt tttgtttgca gctttttcgg caaaagttga ggtgctgaaa aagttaaaaa
    15721 aacgtggttg tttcgccatt aaaggggcga taaattctaa gtttgagacc acataatctt
    15781 tcagtggtcg caaatagcgg ctgtggtaaa gctcgttaaa ttgcgatctg aacgtcggta
    15841 cgtcaatttt gattgggcat tggctggcac aggctttgca ggcaaggcag gtgtccatcg
    15901 ccgctttgac ttcgtgtgaa aaatcatact ctttgttttt attgagcgtg ttgcgaattt
    15961 ttgcaacaaa atcagctaat ttgaccgctt gtttgcgagg tttgaagatc aaatcgtccg
    16021 gcgaaacgtt ttgttcggta agtaatctga gccattcacg cacaagagta gcccgccctt
    16081 tcggtgagta aagacggttg cccgagactt tcattgaagg gcacatcgtg ctgtgtacat
    16141 caaagttaaa acatagcccg ttgccgttac aattcattgc tcctttaaat tcttctcgca
    16201 cttggattgg aatttggcgg tcaaaatcgg ctcgcatttg tgagtcaatc gggtagagcg
    16261 aggtttcgct ttctaatggt gtacaaattt tacctgggtt caagcgattg tacgggtcaa
    16321 ataaggtttt gatgtaacgg agttcttgcc acaaagtttc gccaaagaaa cgttcgccgt
    16381 agtaagaacg catacctttg ccgtgttcgc cccaaatcaa gccaccgtat ttggcggtga
    16441 gttcgactac ttggtcggaa atttgcttaa aggtttccac ttgggctttg tcgcataagt
    16501 caagagcagg gcgaacgtgt agcacgccgg catcaacgtg gccgaacatt ccgtaaggca
    16561 gattatagcg atctaataaa gctcgaaatt ccacgatgta atcggcaagg ttttccggtg
    16621 gcacagcggt gtcttctaca aaggcgatcg gttttgccca gcctttggca ttgcctagca
    16681 ggcctacggc ttttttccgc attgcgtaga ttttctcgat agaatttaca tcactcgtga
    16741 gttggtagcc gataatcccg gcttcattat ttgccatttt ttgatcaagg ctttggcaga
    16801 gtgctttcac ttgggtttca atttgagtct gatcgcttga ggcatattca acaatgttaa
    16861 tccctaaaat cgggttggct gggtcttcgg ttaataaatc tgacaccgaa tgccagacga
    16921 tatcttgctt ggcaagattg agcactttgg aatcaaccgt ttccaccgat aaggcttttg
    16981 cctctaacat aaaaggagcg gagcgtaagg cggcatcaaa ggaattatat ttaatattaa
    17041 ttaaggtgcg atatttggga atcggcagta aattcagttt ggcttcgcaa ataaaggcaa
    17101 gcgaaccttc agaaccggtt aaaatacggg taaggttaaa ttcgctttca ccatggttaa
    17161 acacattttt taaatcatag ccggtaataa aacggttaag ctgaggcagt tcgttcagca
    17221 ctttggggcg taatgttttg caacggttga aaatttcacg gtgcaaggtt ttgccgagag
    17281 cggagagatt taacccttca atatgtgcaa aaaaatcggc agatttgacc gcttgtgtct
    17341 ctaaaatatc gccgttaata agcacagatt tgatggcaag aatatgatca gatgttttgc
    17401 catattgcaa agaaccttgc ccagaggcat cggtgttgat cattccgcct aaagtcgctc
    17461 ggttactggt agaaagttcg ggggaaaaga aaagtccatg tggttttaaa aattgattga
    17521 gctggtcttt caccacgcca gcctgcactc gaacccaacg ctcttccaca ttcagttcca
    17581 aaatctgatt catatggcgg gagagatcaa caataatatt attgttaaga gattgcccgt
    17641 tagtgcctgt gccaccgcct cgtggagtaa aagttaaatg ttgatattct ggcttttggg
    17701 caagtttggt tagaattacg acatcagaaa cggatttcgg aaacagaata gcttgcggaa
    17761 tttgctgata cacgctgttg tctgttgcca gtgaaagcct atctgcataa tttgatgcaa
    17821 tttccccact aaaatgctga ttgacgagtt cagttaaata ggattgggtg gctttatcca
    17881 gttgcggtac ttcagagagt ctaggtatca taagctgtgt ttggtttttt ataataaaag
    17941 cactaaattt tgcttatctt agcaattttt ctaaaaattg ggaatggaat atcaatttga
    18001 ttaaatagtg ttcgaaaaat ggttttttgg ttaaaatata gacaaattat tacgtttcta
    18061 tacatttcat caggaaaaaa cgattgattt ttcgaaaatg aaaccac
//
LOCUS       DANMCL010000057        17802 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.057, whole genome shotgun sequence.
ACCESSION   DANMCL010000057 DANMCL010000000
VERSION     DANMCL010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17802
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.057"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            106..534
                     /gene="rplM"
                     /locus_tag="PXF40_001714"
     CDS             106..534
                     /gene="rplM"
                     /locus_tag="PXF40_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HDL5803038.1"
                     /translation="MKTFVAKPETVQRDWYVVDATGKTLGRLATELARRLRGKHKPEY
                     TPHVDTGDYIIVINADKVAVTGKKQTDKIYYWHTGYVGGIKDATFKEMIARRPEAVIE
                     IAVKGMLPKGPLGREMFRKLKVYAGSEHNHQAQQPQVLDI"
     gene            551..946
                     /gene="rpsI"
                     /locus_tag="PXF40_001715"
     CDS             551..946
                     /gene="rpsI"
                     /locus_tag="PXF40_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HDL5803039.1"
                     /translation="MTAANQNYGTGRRKSSSARVFIKPGSGNITINQRSLEVYFGRET
                     ARMIVRQPLELVELTDKLDLYITVKGGGISGQAGAIRHGITRALMEYDETLRPALRAA
                     GFVTRDARRVERKKVGLHKARRRPQYSKR"
     gene            2628..4348
                     /gene="ltrA"
                     /locus_tag="PXF40_001716"
                     /pseudo
     CDS             2628..4348
                     /gene="ltrA"
                     /locus_tag="PXF40_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341372.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
     gene            4537..5313
                     /gene="yaaA"
                     /locus_tag="PXF40_001717"
     CDS             4537..5313
                     /gene="yaaA"
                     /locus_tag="PXF40_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005622827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HDL5803040.1"
                     /translation="MLAIISPAKTLDFKTNIDGFAFSQPNLTACSQELIDICKQLSPA
                     ELGSLMSISDKLAALNVARFAEWQLEHNEQNAKAALFAFKGDVYTGLEAETLSKAQVE
                     YAQQHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNIITENLQQAID
                     EQGDDILVNLASDEYYGAVKPQNLNATIIKPVFLDEKNGKYKVISFYAKKARGMMVRF
                     ILDTQPTSIEQLKQFNYGGYWFDADSSSESELVFKREEQA"
     gene            5313..5876
                     /locus_tag="PXF40_001718"
     CDS             5313..5876
                     /locus_tag="PXF40_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATPase"
                     /protein_id="HDL5803041.1"
                     /translation="MSAIKKGITLVALSLAGCVSQSPQFAVPDAIHFGQDTFVKVTHS
                     QIDEMQHLLYLPEKSEKNPENWQKGILFFLDKNSKNQTLEQRAAFRQASFAKKPELEA
                     KVEIQQNELHSSVIYPPIERFNNVMLEVTRGRNLACGYGQIQFADKREVGKTVAKKSP
                     NLTAYSQEIARLSLELNQLGWQVQCSK"
     gene            5885..6790
                     /locus_tag="PXF40_001719"
     CDS             5885..6790
                     /locus_tag="PXF40_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HDL5803042.1"
                     /translation="MNEKYSKLVKNAANLAIIVAILLIVIKAFAWWKTGSISILAAMT
                     DSVVDLFASLTNILVLRFALQPADENHAFGHGKAESLAALAQSAFISGSAVFLLLQGF
                     HKLTNPELIAQSSIGVIVSIVSIVITALLVFYQRYVVTLTKSPAIEADSLHYQTDLLM
                     NAAILVAMLLNSAGFVYADAVFAIGIALYIAFNAVKMFWCAVQTLLDQALPDEEIERI
                     KEIASQHPNILGIHDILTRRAGAVRFIQLHLELDDHLTLLVAHEITDSLEQKLLAAFP
                     MSHVIIHQEPTTVVKQEFQDMAENI"
     gene            6790..7542
                     /locus_tag="PXF40_001720"
     CDS             6790..7542
                     /locus_tag="PXF40_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-ribbon-containing protein"
                     /protein_id="HDL5803043.1"
                     /translation="MYQAIVHFSYHNFEQDPVTAISQILNQWLYNGQVIGREMPITFH
                     QNEFQARVCVPTQESLLPQYNSDEVNEALQQAVEIGVIFASFELVGRDYQGEESSHNR
                     SPAFQILYTTHLDTCSPLYDGEQFAPIPLYSLQDQSLSEAILEWQQNWQACDLLQMNG
                     NLLECHALVQISDETSDLAMIGRDLCQQIEQKTHIPTFYYLYRLGRDESEYQRKCPCC
                     GGEWKLTEPLHDIFHFRCEPCRLISNLSWELL"
     gene            7643..8968
                     /locus_tag="PXF40_001721"
     CDS             7643..8968
                     /locus_tag="PXF40_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HDL5803044.1"
                     /translation="MLIFNLIVFAAILFLLAKIYKSTQKLGQTVFIGLFLGLASGAFL
                     QTFYEKATVDATLDWINLIGNGYVRLLQMIVMPLVFVSILSAITRLKEAGSLGKISFS
                     VLSVLLVTTAIAAAIGIALVYLFDLSAEGLVAGSRELAAQEKVVGRVEQVSNLSVPSM
                     LLSFIPKNPFLELTGANPTSIINTVIFSALLGIAALSLGKEDKALGERIAQGVETLNK
                     LVMRLVRFVIRLTPYGVFALMIKMAATSQWSDIVNLGSFIVASYIAIGLMFIVHGILL
                     FVAKINPLDYYKKVLPTLSFAFTSRSSAATIPLNIETQTNKLGNNSVIANFSATFGAT
                     IGQNGCAGIYPAMLAVMVAPTVGMDPFSLNYILTLILVVAISSFGIAGVGGGATFAAI
                     VVLSTLNLPIELVGLLISVEPIIDMARTALNVNGAMVAGTLTNKWVKAE"
     gene            complement(9028..9687)
                     /locus_tag="PXF40_001722"
     CDS             complement(9028..9687)
                     /locus_tag="PXF40_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HDL5803045.1"
                     /translation="MFNISKQQVLDAFHFRSACRSYDPNKKINKEDMDYILELGRLSP
                     SSVGSEPWKFLVLQNPETRQKIAPVSWGIKHPMEEMSHLVVILTKKNVRYDSVYMRDM
                     LAKRGLTYEQIEASLVRYKSFQEEDMKLLSERELFDWSTKQTYIALGNMMTGAALIGI
                     DSCPIEGFHYDTVNQILSDEGLFDLNEYGVSCMITFGYRNKEIKKKSRKPTEEVIAWI
                     E"
     gene            9916..10902
                     /gene="pheS"
                     /locus_tag="PXF40_001723"
     CDS             9916..10902
                     /gene="pheS"
                     /locus_tag="PXF40_001723"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HDL5803046.1"
                     /translation="MQHLKDLTNKAREALDKIDQNLEALEEFRVEYFGKKGHFTTLMQ
                     ELRNIAAEERPAIGAKINEAKQVVLDVLNAKKEEWEQAVLNAKLANESIDVSLPGRKT
                     ELGGLHPVSITIERVVKFFSELGFTVANGPEIETDYYNFDALNIPDHHPARADHDTFW
                     FDANRLLRTQTSGVQIRTMENVKPPIRIVAPGRVYRNDYDQTHTPMFHQIELLYVDKE
                     ANFTELKGLIHDFLKAFFEEDLQVRFRPSFFPFTEPSAEVDVMRQNGKWLEVLGCGMV
                     HPNVLRNVGIDPEEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK"
     gene            10950..13337
                     /gene="pheT"
                     /locus_tag="PXF40_001724"
     CDS             10950..13337
                     /gene="pheT"
                     /locus_tag="PXF40_001724"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HDL5803047.1"
                     /translation="MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSG
                     VVVGEVVECAQHPDADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLPGD
                     FKIKKTKLRGQPSEGMLCSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEI
                     SLTPNRADCLSIAGIAREVGVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLA
                     RVVKNVNVKATSPLWLQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGI
                     QVRMAKEGEELVLLDGTNAKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLE
                     SAFFAPLAITGRARQYGLHTDASHRFERGVDPELTRQAMERATALLLEICGGEAGEIV
                     EAVSQENLPKRNTVTLRRSKLDSVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPS
                     WRFDIEIEEDLIEEIARIYGYNSIPNNSPLAHLTMKGTPEKLLEANRIRMALVDSDYQ
                     EVITYSFVDPKKQSLLHPQQEALILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNR
                     VRIFEAGLRFIPDSNAESGVRQEFVFGAAIVGDKRPVHWENKSEAADFFDLKGDIERI
                     LSLTSIRHDLQFVAKQFPALHPGQSAAIMLDGKEIGFIGTVHPSIVQKFGIKGKPIVC
                     EILASAIAERPVTQAGEISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLVAVNL
                     FDVYRGSNLESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLRD"
     gene            13395..13691
                     /locus_tag="PXF40_001725"
     CDS             13395..13691
                     /locus_tag="PXF40_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HDL5803048.1"
                     /translation="MALTKIEIAENLIEKFGLEKRVAKQFVELFFEEIRSSLENGEEV
                     KLSGFGNFSLREKKARPGRNPKTGENVAVSARRVVVFKAGQKLRERVEQASSQS"
     gene            13730..14251
                     /locus_tag="PXF40_001726"
     CDS             13730..14251
                     /locus_tag="PXF40_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5803049.1"
                     /translation="MKLTKRWLSLGCLLAITAMLVACSSSDTTSKSQVKSKVYRSIYQ
                     SDLSDPIMAISRLSEHQHEWKGTRYRLGGNSKAGIDCSGFMQVTFKDLFGIDLPRTTT
                     EQAKAGERISKDELRTGDLVFFKTGRGPNGKHVGVYVKNGQFLHASTKGGVIYSDLDS
                     PYWSKAFWQARRL"
     gene            14267..15310
                     /gene="degS"
                     /locus_tag="PXF40_001727"
     CDS             14267..15310
                     /gene="degS"
                     /locus_tag="PXF40_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HDL5803050.1"
                     /translation="MLKKIGQAVIFGLFCAILILFVAPIIQSKGSSFSLSAFTQKEIV
                     SYNAAVKIASPAVVNVYSRNFSSENETFEVKNLGSGVIMSSDGYILTNRHVIEDADQI
                     VIALQNGAISTNVKLVGDDSLTDLAVLKIEGENLPTIPQNPERKLQIGDVVLAIGNPL
                     NLGQSITQGIVSAIGRKTLTESGRQNFIQTDVSINQGNSGGALINTAGELIGINTLRF
                     GKNTNELSEGLNFAIPINLANQIMSKIIKDGRVIRGYFGVSTDLLDTAKMQGYEKGVI
                     IVNVDKNGPAAKAGIQAGDLVLKVGDIEAFSPSQMMEELAEMKPYTTVKVLVQRDEQL
                     LNFDVTITELQTQ"
     gene            15319..15993
                     /gene="cmk"
                     /locus_tag="PXF40_001728"
     CDS             15319..15993
                     /gene="cmk"
                     /locus_tag="PXF40_001728"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HDL5803051.1"
                     /translation="MKKIVITVDGPSGAGKGTLCHALAEKLGFDFLDSGALYRITALS
                     AIKKEVPLDDEEKLAEVGRNLDIQFLPENGEIQVILEGENVGDLIRTAEAGQNASKVA
                     AFPLVREALLERQRAFSSEKGLIADGRDMGTVVFPDAQIKLFLDASAEERTKRRVKQL
                     QEKGFNANFDEILAEIKERDFRDRNRSVAPLVPAKDALLLDSTHLSIEDVINQALNHI
                     AQYIKF"
     gene            16085..17752
                     /gene="rpsA"
                     /locus_tag="PXF40_001729"
     CDS             16085..17752
                     /gene="rpsA"
                     /locus_tag="PXF40_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006717605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HDL5803052.1"
                     /translation="MSELSFAQLLEESFAATPRLGDVVKGTVVAIQKGLVIVDTGFKS
                     ESAIDASEFTNAQGELEVQVGDEVDVVLKAVEDGFGATVVSRGDAKRNEAWIALEKAF
                     EEQATVIGFVNGKVKGGFTVELNGVRAFLPGSLVDTRPVRDSLNLEGKEYEFKVIKLD
                     QKRNNVVVSRRAVIETESNQDRDAVLANLVEGSEVKGTVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEVVNVGDEVTVKVLKFDKDKTRVSLGLKQLGQDPWAVIAENHPV
                     NSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLE
                     VDEERRRISLGLKQCKANPWEQFAATHSKNDKVSGKIKSITDFGIFIGLEGGIDGLVH
                     LSDISWNVSGEEAVRNYKKGDEVEAVVLQVDAVKERISLGIKQLESDPFTNFVDGTKK
                     GAILTGKVVEVDAKGVKVELEGGVEAFIRANEATAERVEDITSVISVGDSIEAKYTGV
                     DRKSRVVNLSVRAKNEAEESAAIAQVNKEEVVVPNAFAEAFKAAKGE"
BASE COUNT         5511 a         3104 c         4047 g         5140 t
ORIGIN      
        1 aagtttggtc tgaatcagac tcgaaggggt cgggttcacc gtaaaataat aggaaatacc
       61 tcaatgaggt attgggtttt aaactttaaa tttggtattt aattaatgaa aacttttgta
      121 gcaaaaccag aaacagtaca acgtgactgg tatgtagtag atgcgacggg taaaacatta
      181 ggtcgtttag cgactgaatt ggcacgccgt cttcgtggta aacataaacc tgagtacact
      241 ccacacgttg ataccggtga ttacatcatc gtgatcaatg cagacaaagt agcagtaaca
      301 ggtaaaaaac aaactgacaa aatctactac tggcacactg gctatgtagg tggcatcaaa
      361 gatgcaacct tcaaagaaat gattgctcgt cgtcctgaag ctgtgattga aatcgcagtg
      421 aaaggtatgt taccaaaagg tccacttggt cgtgaaatgt tccgtaaatt aaaagtttac
      481 gcaggttcag aacacaatca ccaagcacaa caaccacaag ttttagatat ctaattcacg
      541 gagcataaaa atgacagcag caaatcaaaa ctacggcaca ggtcgccgca aaagctcttc
      601 agcccgtgta tttatcaaac cgggttcagg taacattact atcaaccaac gttcacttga
      661 agtttacttc ggtcgtgaaa cagctcgtat gatcgtacgt cagccgttag aattggttga
      721 attaactgat aaattagacc tttacatcac tgttaaaggt ggtggtattt ctggtcaagc
      781 gggtgcaatc cgtcacggta tcactcgtgc attaatggaa tacgatgaaa cgctacgccc
      841 agcacttcgt gcagcaggct tcgttactcg tgacgcacgt cgcgttgaac gtaaaaaagt
      901 gggtttacac aaagcacgtc gtcgtccaca atactcaaaa cgttaagtgc gacaagttgt
      961 cgtacttatg gcaataactc cttatatatc aaggagttat tgctggaagt gggtggtatt
     1021 cttatcacct gcttccgact ttccaagcac tcttcggagt gcttggaaag acaggcaaga
     1081 gaaaaggggc tttgcccaag cactcttgtt ctaagttggg aaagtaaatg aaccaactcg
     1141 aaaggctgta aggtatgatc ttcactttga tgtacttggt ttttttctta ataccaagat
     1201 agagtaagaa agcaagatcc gcagaccgga gttacccata ccccagagca gagaaaattt
     1261 acaacaccta ctataaataa agtccaatag atcgcctcag cactcagaaa agacatcaga
     1321 actaagactt ggtaaatctt agggaaggag tgccatcttt acttatactt ttcacactcg
     1381 caatctacgg taatcgtaga atgctcctca atagtgaata aaaacactaa ggataaactc
     1441 ttgtttattc gtttttatga gctagggata attatacctt aaattctcgt taaaatcacc
     1501 tctaatactc acattagcta gggttagcta ccttcgccta ttggacaggt tataggctat
     1561 ttgcgggaaa atttggatat agacaaagcg actttagtcg cataagtgaa tttattttgt
     1621 aaaggttcgg acttatttat gcagtatagg atactgactt agtaagtatg cgtaagctat
     1681 tactgtcatt gttacggtca aacaatccga agatatgagt agtacggagg gaatgataag
     1741 gtaacctgtt atatggctaa cagtagtcta gggatagtgc gacaccggta acggtgtggt
     1801 gcggagcttc ctgacaatga acccctgatg aaaatcagtc aatgaaatcg tgagaggaca
     1861 ttgggagaaa gtgaatagca caccttcaag gggctagact gggtagaaag ataaacgtaa
     1921 gtgaacagtt gataaacctc gttatcgaga gagagccaaa gctattgata ggctctgacc
     1981 aaaaggtagg cagtcggtta ttcttcttta acgtgaggat acgccatcaa agcactgtcg
     2041 ggggagagac tgtatcttca ctactcgtgt gatagtaatg gaacttggta agcctgtatt
     2101 tctgccttgc ccacaatact caaaccgttt gaaatagatg gcgaaggtaa aagaggaaaa
     2161 ggcaagtaaa gcgtaagcga tactgttggg aatgcaggta agggaggtta gaaaaagcga
     2221 atgctatgct gtaatggcat agatagggtg tgaaacatag cctaacccga aagggtgcag
     2281 acttctaact ggtctttcat cgtaagatga atagcgtttc ctttaagggt aacaccgaaa
     2341 gagattgtag ataacagaag agaaattgaa tgttatcaag gaatacaatg ttgaataggt
     2401 acaaaaacaa attaaagaaa tgagcgttag gctcatcata acctagcgct cgactcttta
     2461 acccaatcgg ttacaagagc ggttgaaatt atcggtaaaa cggtaagatc ctcttgtaac
     2521 caaagggaat aaactaagga tagtttatct caatagggat ttgtttactt gaaggatcta
     2581 cccacttgct gagactttcg acttatcttg taatatcaga ggtaggtatg aaagagcgta
     2641 agcattatac tgaaaagtta gcttgcaatc cagcgacctc gcacatctcc aaatggcatt
     2701 atgtcgattg gcataaagct gaaacgtatg tgaaaggaat gcaaattcgg attgcgaagg
     2761 caacactgga aggcaattgg cgtaaggtta aaaacttaca acgaatgcta acccactcac
     2821 attatgctaa attagttgca gtaagaagag tgactgaaaa tcaaggtaag cgaacaagtg
     2881 gtgtcgataa agagctttgg gagaccccag agacaaaatg gcaagccgca ctatcattga
     2941 cggaaaaagg gtataaacct agtccattaa gacgagtgta tatccccaaa ccgaatggaa
     3001 agaaacgtcc gttgggtatt ccaacaatgc gagatagagc aatgcaagcc ctttatttat
     3061 tggcaataca acctgtggca gaaacaactg cggataaagg ttcttatgga tttagattaa
     3121 accgttcaac ggtagatgct attactcata tacactaaat ttattcgcat aaaggcaaga
     3181 aaactaatca acctgttgag tgggtacttg atgcggatat tgcaggttgt tttgaccaca
     3241 taagccacga ctggctatta aagcatattc caatgaataa acggatattg cggaaatggc
     3301 taaaatcagg tgtagtggaa tttggacggt tgaaacgaac agaggaaggt acaccacagg
     3361 gtgggattat ctcgccaacg cttgcaaata tggcattaga tggattggaa aaactgttag
     3421 aaactcattt tggaggaaaa ggcagtcgga caattcgaga aaataaaact tacttagtac
     3481 gttatgcaga tgactttatc atatcaggta aaacgaaaga gttacttgaa aatcaagtta
     3541 tcccacttat ccagaacttt ctgaatgaac gaggtttatc cttatcaaca gaaaagacga
     3601 aagtggtaca tattgaagaa ggttttgatt ttctaggttg gaatgtgaga cgtttcaaag
     3661 gaaaaatact gaacagacca agtcaaaaga atgtgaaagc gttctacaac aaggtaaaag
     3721 aggtaatttc taaatgaaaa tggctaaaca ggaagatctt ataatggtgc taaacccaat
     3781 gttacgaggt tgggcaaatt atcatcgaag ccaagttgca agtaaggcat tcggacgaat
     3841 ggacgcatta gtttggaaag tactttggaa atggtgtgaa cgccgtcatc acaataaagg
     3901 tattatgtgg ataaaagaga aatacttttg taccacagcg actcgaaatt gggtatttgg
     3961 cacagtttat accaatgaaa aaggagaaac taagccgata gacttattct attgtggcta
     4021 tgttaaaatc aaacgacacg ttaaaattaa gtctgaatat aatccgtttt tgcctgaatg
     4081 ggagttgtac ggcgaaaaac tgagccaaga acgtctgtat gaagaacaat cacacagacg
     4141 acaatggcag gcactgtata aagaccagcg tggaaaatgt gcattatgtg ggttgccaat
     4201 aaccaaagaa acaggctggc acgatcatca tatcgtgtac aaaatgttag gaggaagcga
     4261 tgcattaagc aatcgttgtt tggtacatcc gacttgtcac ataaagattc atactttgaa
     4321 cttggaggtc gtgaagccgg ctatatagct gatgaaaggc ttgagctgta tgcagagaaa
     4381 tttgcttgta cagttcttag ggggcggagg tgcagtaatg tactttcgct acccgacttt
     4441 tcttttcgtt ttcaagaagg cagggtttcc tgcctttttt gtctttatga ctgtggtaga
     4501 ataaccgccc tgattaacta tttgatagag gcatttatgt tagccattat ttcccctgcc
     4561 aaaacccttg attttaaaac caatattgac ggttttgcat tttctcaacc aaatttgacc
     4621 gcttgtagcc aagaattaat tgatatttgt aaacagcttt cacctgctga attaggtagt
     4681 ttgatgtcaa ttagcgataa attagccgct ttaaatgtgg ctcgctttgc cgagtggcag
     4741 cttgagcata acgaacaaaa tgccaaagcc gccctctttg cctttaaagg tgatgtttat
     4801 accggactag aggcagaaac gttaagcaaa gcacaagttg aatatgctca acaacatttg
     4861 cgtatgcttt caggcttgta tggtttatta aagccgttag atttaatgca gccttatcgt
     4921 ttagaaatgg gcactaagtt agccaatccg aaaggcaaag atctttatgc tttctggggc
     4981 aatattatta ctgaaaattt gcagcaagcg attgatgaac aaggcgatga tattttagtt
     5041 aatcttgcct ctgatgaata ttatggtgcg gttaagccac aaaatctaaa tgcgactatt
     5101 atcaagccgg tgtttttaga tgagaaaaac ggtaaatata aagtgatcag cttctatgcc
     5161 aaaaaagccc gtggaatgat ggttcgcttt atattagaca cccaaccgac tagcatcgaa
     5221 cagctcaaac agtttaacta cgggggctat tggtttgatg cagacagttc tagtgaaagc
     5281 gagctagtct ttaaacgtga ggagcaggca taatgtcggc tatcaaaaag ggaataactt
     5341 tggttgcgtt atcattggca ggttgtgtca gccaaagccc acaatttgca gtgcctgatg
     5401 ctattcactt tgggcaggat acttttgtaa aagtcaccca cagccaaatt gatgaaatgc
     5461 aacatttact ttatttgcca gaaaagagtg agaaaaatcc ggaaaattgg caaaaaggca
     5521 ttttattttt cttagataaa aacagtaaaa atcaaacctt agagcaacga gctgcattcc
     5581 gccaagcaag ttttgcgaaa aagccggagc ttgaggcgaa agtggaaatt cagcaaaatg
     5641 aattacacag cagtgtgatt tatccaccta tagaacgttt taacaatgtg atgttagaag
     5701 taacccgtgg gcggaattta gcttgtggtt acgggcagat tcaatttgca gataagcggg
     5761 aagttggcaa gacagttgca aaaaaatcgc cgaatttgac cgcttacagc caagaaattg
     5821 ctagactttc tcttgaatta aaccaactgg gttggcaagt ccaatgcagt aaataatgta
     5881 gtaaatgaac gaaaaataca gcaaattagt caaaaatgca gcgaatttag cgattattgt
     5941 tgcgatctta ctgattgtga ttaaagcctt tgcatggtgg aaaaccggtt cgatttcaat
     6001 cttggcagca atgacggatt cggtagtgga tctgtttgct tcgctaacca atattttagt
     6061 gctgcgtttt gcactacaac cggcagatga gaatcacgcg tttgggcacg gcaaagcgga
     6121 gtctttggcg gcacttgccc aaagtgcgtt tatttccggc tcggcggttt tcctactgct
     6181 acaaggtttc cataaactca ccaatccgga attaattgct caatcgagta ttggggtaat
     6241 tgtcagtatt gtatcaattg tgattactgc acttttagtc ttttatcagc gttatgttgt
     6301 cacgcttacg aaaagtccgg cgattgaagc ggattcgtta cattaccaaa ctgatttatt
     6361 aatgaatgcg gcaattttag tggcaatgtt gcttaatagt gccggttttg tgtacgccga
     6421 tgcagttttt gcaataggta ttgccctcta cattgctttc aatgcagtaa aaatgttttg
     6481 gtgtgcggtg caaaccttgc tagaccaagc tttgcccgat gaagaaattg agcggattaa
     6541 agagattgct tcgcaacatc cgaacatttt agggattcac gatattctaa cccgccgtgc
     6601 aggtgcagtg cgttttatcc aattacattt ggaattagac gatcacttaa cgctgctagt
     6661 agctcacgaa ataactgata gccttgagca gaaattgctg gcggcatttc cgatgtctca
     6721 cgtgattatt catcaagagc cgactacggt ggtcaaacaa gaatttcaag atatggcgga
     6781 gaatatttaa tgtatcaggc gatagtgcat ttcagctatc ataattttga gcaagatccg
     6841 gtgacggcaa ttagccaaat cttaaatcaa tggttatata acgggcaagt cattggcaga
     6901 gaaatgccga ttacttttca tcaaaacgag tttcaagctc gggtttgtgt gcctacacaa
     6961 gaaagccttt tgccacaata taatagtgat gaagtaaatg aagcgttgca acaagcggtc
     7021 gaaatcggcg taatttttgc aagttttgag cttgtcgggc gagattatca gggcgaagaa
     7081 agcagtcata accgctcgcc agcgtttcaa atattatata ccacccattt agatacctgc
     7141 tcgccacttt atgatggaga gcagtttgcc ccaattccgc tttattcttt acaggatcag
     7201 tctcttagcg aagcgatatt ggaatggcag caaaattggc aagcgtgcga tctgctacaa
     7261 atgaacggca atctgctgga gtgccacgca cttgttcaaa ttagtgatga aacaagcgat
     7321 cttgcaatga tcggtcgaga tctatgtcag caaattgagc agaaaactca cattcccacc
     7381 ttttattacc tctaccgttt agggcgtgat gaaagtgaat atcaacgcaa atgcccttgt
     7441 tgtggcggag aatggaaatt aactgagccg ttgcacgata ttttccattt tagatgtgag
     7501 ccttgccgtt tgatctctaa tctaagctgg gaattattat aacttttagt tataccaaag
     7561 taataaatca tcttgaatga atgccgcaag cgtaataccc ttgcggcatt tttataataa
     7621 gcggttttac tttggaggtt ctgtgcttat tttcaactta attgtctttg cggcaatatt
     7681 atttttattg gctaaaattt ataaatctac gcaaaaactc ggtcaaacag tgtttattgg
     7741 gttattttta gggcttgcaa gcggtgcttt tttgcaaact ttttacgaaa aagctactgt
     7801 tgatgcaact cttgattgga ttaacttaat tggtaacggt tatgttcgct tgctacaaat
     7861 gatcgtaatg ccattggtgt ttgtctctat tttatcggca attacccgct taaaagaggc
     7921 aggatcttta ggcaaaatta gttttagtgt gctatcagtg ttattagtga ccaccgcgat
     7981 tgccgcagcg attggtattg ctttagtgta tctgtttgat ttatctgccg agggtttagt
     8041 cgccggctcc cgtgagcttg ccgctcaaga gaaagtggta gggcgtgtgg agcaggtgag
     8101 caacttatct gtgccttcaa tgttgctttc tttcattccg aaaaatccgt ttttagaatt
     8161 aaccggtgca aacccaacgt cgatcatcaa cacggttatt ttctcggctc tgctaggcat
     8221 tgctgcactg agcttaggca aagaagataa agcgttgggc gaacgtatcg cacaaggtgt
     8281 agagacctta aataaactgg ttatgcgttt agtacgtttt gtgattcgcc taacccctta
     8341 tggcgtattt gcgttgatga tcaaaatggc ggcaacttct caatggagcg atattgtaaa
     8401 tttaggtagc tttattgtgg catcatacat tgcgattggt ttgatgttta ttgtgcacgg
     8461 tattttactc tttgtggcta aaatcaaccc gttggattac tacaaaaaag tgttgccgac
     8521 attaagtttt gcttttacgt ctcgttccag tgcggcaacc attccgttga atattgagac
     8581 gcaaaccaat aaattaggta ataacagtgt gattgccaac ttttctgcaa cctttggggc
     8641 aaccatcggg caaaatggct gtgcgggaat ttatccggca atgttggcgg tgatggtcgc
     8701 tccaacagtg ggaatggatc cgtttagctt aaactatatt ttaaccttga ttttggtggt
     8761 ggcaatttcc tcatttggca ttgccggtgt aggtggtggt gcaacttttg cggcgattgt
     8821 ggtgctatca accttgaatc tgccgattga gttagtaggc ttgctcattt cagttgagcc
     8881 gattattgat atggctcgca ccgccttaaa cgtgaatggt gcaatggtgg cgggcacatt
     8941 aaccaataaa tgggtgaaag ccgagtagtc aaaactaaag atataaaaat gggcgattaa
     9001 ttcgcccgtt tttataagtt aaggtgatta ttcaatccac gcaatcactt cttcggtagg
     9061 tttgcgggat tttttcttaa tttctttgtt gcgatagcca aaagttatca tacaagacac
     9121 accatattcg tttaggtcaa ataagccttc gtccgataaa atttggttta cggtatcgta
     9181 atgaaaacct tcaatcgggc aagagtcaat accaatcaga gccgcaccgg tcatcatatt
     9241 gcctaatgca atataggttt gcttggtact ccaatcgaat aattcacgtt cactaagcaa
     9301 tttcatatcc tcttcttgga acgacttata gcgtaccagc gaggcttcaa tctgctcata
     9361 ggttaagcct cgtttggcta acatatcacg catatagaca gaatcataac ggacattctt
     9421 tttggttaaa atcaccacta aatggctcat ttcttccatt gggtgtttaa ttccccacga
     9481 aaccggggcg attttctgac gggtttccgg gttttgtagc actaaaaatt tccacggttc
     9541 agaaccgaca gagcttggtg agagacgccc gagttccaaa atataatcca tatcttcttt
     9601 gttgattttt ttgtttggat cgtaactgcg acaggccgaa cggaagtgaa aagcgtctaa
     9661 aacttgctgt ttgctaatat taaacatcgt ttttcctttt ataagtgaaa taagtagatt
     9721 aatgataact tgatttagag cagaatgcga atttcacgcc tgttaatttg caaaaaatta
     9781 ggaaaaaatg accgcttgtt taaaattgct ttaccttaaa aatcaatcat ttaacgaatc
     9841 ggttgattta ctttttctgg ctaaagtatt attattcatg aaatttttta tttcattgag
     9901 tttagaggat aggtaatgca acacctaaaa gatttaacta ataaagcacg tgaagcttta
     9961 gataagattg atcaaaattt agaggcttta gaagagttta gagtcgaata ttttggtaaa
    10021 aaagggcatt ttacaacgtt aatgcaagaa ttacgcaata ttgcagcgga agaaagaccg
    10081 gcaatcggag caaaaattaa tgaagcaaag caagttgtgc ttgatgtgtt aaatgccaaa
    10141 aaagaagaat gggaacaagc tgtattaaat gcaaaattag ctaatgagag cattgatgtt
    10201 tcactgccgg ggcgtaaaac tgaattaggt ggtttgcacc ctgtttctat cactattgag
    10261 cgtgtggtga aatttttctc tgaattaggt tttaccgtag caaacggacc tgaaattgaa
    10321 accgattact ataacttcga tgcgttaaac attccggatc atcatccggc tcgagcggat
    10381 cacgatacgt tttggtttga tgccaatcgt ttattaagaa cccaaacctc gggtgtgcaa
    10441 atccgtacaa tggaaaatgt aaaaccgcct atccgtattg tggcaccggg gcgtgtatat
    10501 cgtaatgact acgaccaaac ccacacaccg atgtttcacc aaatcgaatt gttatatgtg
    10561 gataaagaag caaactttac cgagttaaaa ggcttaattc acgattttct caaagcattc
    10621 tttgaagaag atttacaagt gcgtttccgc ccgtcattct tcccattcac tgagccttct
    10681 gcagaagtag atgtaatgcg tcaaaacggc aaatggttag aagtgttagg ttgcggtatg
    10741 gtacacccga atgtgttacg caatgtaggg attgaccctg aagaatatag cggttttgct
    10801 gtgggaatgg gcgtcgagcg tttaacgatg ttacgctaca atgtcacgga tttacgttca
    10861 ttctttgaaa atgacttacg tttcttaaaa caatttaagt aatacaagcg gttaaaaatt
    10921 tagaaaattt tacaaatagg atagaaataa tgaaattcaa tgaatcttgg ttgcgtgaat
    10981 gggtaaaccc agcgattagc acagaacagt tatgcgacca aattacaatg ttagggttag
    11041 aagttgacga tgtagagccg gtagctggtg cgttttcggg tgtagttgtg ggtgaagtgg
    11101 tggaatgcgc ccagcacccg gatgctgaca aattgcgtgt cactaaagtg aatgttggtg
    11161 gcgaacgttt attagatatt gtttgtggtg caccaaactg ccgtcaaggt ttaaaagtgg
    11221 cttgcgctgt tgaaggtgca gtgctaccgg gcgatttcaa aattaagaaa accaaattgc
    11281 gtggtcagcc ttcagagggg atgttatgtt cttactcaga acttgggatt aaagaagatc
    11341 atagcggtat tattgaatta cctgctgatg cacctattgg tcaagatttc cgtgaatatt
    11401 taaatttaaa tgatgtggcg attgaaatca gccttacgcc aaaccgtgcc gactgcttaa
    11461 gcattgccgg cattgctcgt gaagtggggg tgattaaccg tgtcgatgtg aaagctccaa
    11521 ctattacaga tgtaaaagcc acgatttcag ataaagtttc agtggaatta caagcaccgg
    11581 aggcttgccc tcgctattta gcccgtgtgg tgaaaaatgt gaatgtcaaa gcgacatcgc
    11641 cactttggtt acaagaaaaa ttacgccgtt gtgggattcg ctcaatcgat ccaatcgttg
    11701 atattactaa cttgagcctt ttagaattag ggcagccaat gcacgccttt gatgcagcga
    11761 aaattgaagg tggcattcaa gtgcgtatgg caaaagaagg cgaagaattg gtattgctag
    11821 atggcacaaa cgctaaatta caatcgaata ccttagtgat tgctgatagc aaaggggcat
    11881 tggctatggc aggtattttc ggtggcgaag ccagcggggt gagcgagaat acgaaagatg
    11941 tggtgttaga gtctgcattt tttgctccat tagcgattac cggtcgcgct cgtcaatatg
    12001 ggttacatac cgacgcatca caccgttttg agcgtggggt tgatccagaa ttaactcgtc
    12061 aagcaatgga gcgtgcaacg gcattattac tggaaatttg cggcggtgaa gcaggtgaaa
    12121 ttgtggaagc cgtgagccaa gaaaacctac caaaacgcaa tactgtcacg cttagacgca
    12181 gtaaattaga ttcggtgatt ggtcatcata ttgacgatgc aacggtaacc gatattttaa
    12241 cccgcttagg cttgaacgta acatttgcgg ataatagttg gacggcaatt gctccaagtt
    12301 ggcgttttga tattgaaatt gaagaagatt taattgaaga aatcgcgcga atttatggct
    12361 acaacagtat cccaaataat tcgccacttg ctcatttaac gatgaaaggt acgccggaaa
    12421 aattactgga agcaaaccgt attcgtatgg cattggtaga tagtgattac caagaagtga
    12481 ttacttatag ctttgttgat ccgaaaaaac aatcattatt gcacccacag caagaagcct
    12541 tgattttacc aaacccgatt tcaagtgaaa tgtcggcaat gcgtgtttct cttttaaccg
    12601 gtttgttgga cactatcgtg tataaccaaa gccgtcagca aaaccgtgtg cgtatttttg
    12661 aagcaggtct acgttttatt ccggatagca atgcggaatc aggcgtgcgt caagaatttg
    12721 tttttggtgc ggcgattgta ggcgataaac gtccggtaca ttgggaaaac aaatcagaag
    12781 cagccgattt ctttgattta aaaggcgata ttgagcgtat tctttcttta acctctatcc
    12841 gccacgatct gcaatttgtc gcaaaacagt tcccagcatt acacccgggg caatcggctg
    12901 cgattatgct tgatggcaaa gaaattggtt ttatcggaac tgttcacccg tcaattgtgc
    12961 aaaagtttgg cattaaaggc aaaccgattg tatgtgaaat tctagcatca gctattgcag
    13021 agcgtccggt tacacaagcg ggcgaaattt ctaaatttcc tgcaaataac cgtgatattg
    13081 cggtagtggt tgatgaatct gttcctgcag gtgaggtgtt agaggcttgt cgtaaagctg
    13141 gtggtaataa attagtggca gtaaatttat ttgacgttta ccgtggttcg aatttagaaa
    13201 gtggtaagaa gagtttagcc attagcttaa cggttcaaga taatgaaaaa acattagaag
    13261 aaaatgaaat caatgcggta attcaagcgg tattagctga attagcaaca cgtttcaatg
    13321 cggtacttcg tgattaatca gtaaaatatg gctgatttat tttatcagcc ataacaataa
    13381 actaaggata aatgatggcg cttaccaaga ttgaaattgc agaaaacctg attgaaaaat
    13441 ttgggttaga aaagcgtgta gcgaagcaat ttgttgaatt gttctttgaa gagatccgat
    13501 cctccctcga aaatggtgaa gaagtgaaat tatctggttt tggtaatttt tcactgagag
    13561 aaaaaaaagc tcgtccagga agaaatccta aaacggggga aaatgtggct gtttcagccc
    13621 gtcgagtagt agtttttaaa gctgggcaaa aattacgaga acgtgttgag caagctagct
    13681 cccaatcata ggggcagtta tattagttag atttaatgtg gagtaataaa tgaaattaac
    13741 caaacggtgg ctttccttag gttgtttgtt agctattaca gcgatgttag tggcttgttc
    13801 aagttcagat acaacctcta agtctcaagt aaaaagtaaa gtttatcgtt caatatacca
    13861 atcagacctt tctgatccta ttatggcaat tagtcgatta agtgaacatc aacacgaatg
    13921 gaaaggcact cgctatcgtt taggtggcaa tagcaaggct ggcatcgact gttctggttt
    13981 tatgcaagtc acttttaaag atctttttgg gatagatttg ccgagaacca ccacagagca
    14041 ggctaaggct ggtgagcgta tatccaaaga cgaattgcgt acaggtgatt tagttttttt
    14101 caagacaggg cgtggtccaa atgggaaaca cgttggtgtt tatgtaaaaa atgggcaatt
    14161 tcttcacgcc tcaacaaagg gaggggtgat ttattctgat ttggattcgc catattggtc
    14221 taaggctttc tggcaggctc gtcgtttata atttagggta acatacatgc tgaaaaaaat
    14281 cggacaagcg gtcatatttg gacttttttg tgcaatttta attttgtttg tagctccaat
    14341 tattcagagt aaagggagtt cgttttcatt atcagcattc actcaaaaag agattgtaag
    14401 ctacaatgca gcggttaaaa tagcctcccc cgcagtcgtt aacgtatata gccgaaattt
    14461 tagttctgaa aatgaaacat ttgaagttaa gaatttaggt tcgggtgtga ttatgagtag
    14521 cgatggctat attttaacta acaggcatgt gattgaagat gcggatcaaa tcgtgattgc
    14581 tttgcaaaac ggtgctattt cgactaatgt aaaattagtc ggcgatgatt ctttaactga
    14641 tttagctgtt ttaaaaattg agggtgagaa tttacctact attccacaaa atccggagcg
    14701 caaactacaa attggcgatg tggtgttggc aattggtaat cctttgaatt taggacagag
    14761 cattacgcaa gggatagtca gtgctattgg gcgaaaaacc ttaacagaaa gtggtagaca
    14821 aaattttatt cagacagatg tttccattaa tcaagggaac tcaggtggtg ctttaattaa
    14881 tactgctggt gagctaatag gtattaacac tttgcgtttt gggaaaaata cgaatgaatt
    14941 gtcagagggc ctaaattttg cgattcccat taatctggcg aatcaaatta tgagtaagat
    15001 cattaaagat ggccgagtta ttcgtggcta ttttggggta agtacagatt tgcttgacac
    15061 cgcaaaaatg caaggttatg aaaaaggggt gatcattgtt aatgtagata aaaatgggcc
    15121 agccgcaaaa gcggggattc aagcaggtga cttagtgctt aaagtcggag atattgaggc
    15181 attctctcct tctcaaatga tggaagagct tgctgaaatg aaaccttata ctacagtaaa
    15241 agtattggtt caacgtgatg aacaattact taactttgat gtaactatta ctgagttaca
    15301 gactcaatag ggtagaaaat gaaaaaaata gtgattacag ttgatgggcc gagtggtgca
    15361 ggtaaaggaa cgttatgtca tgcattggct gaaaaattag ggtttgattt tttagattct
    15421 ggagccttat accggattac tgcattaagc gcaattaaaa aagaggttcc ccttgatgat
    15481 gaggaaaaac tagcggaagt tgggcgtaat cttgatattc aatttttgcc agaaaatggc
    15541 gagattcagg tgattttgga aggagaaaat gtaggcgact taatccgaac ggcagaagca
    15601 ggtcaaaatg cctctaaagt cgctgctttc cctttggtac gtgaagcact tttagaacgc
    15661 caaagagcct ttagtagcga aaaaggtctg attgcagatg gacgagatat ggggacagtt
    15721 gtgtttcctg atgcacaaat taagctgttt ttagatgcaa gtgccgaaga acgcacaaaa
    15781 agacgtgtaa aacagttgca agaaaaggga tttaatgcta actttgacga gattttagcc
    15841 gagataaaag aacgtgattt tcgcgataga aatcgatcag tcgcgccact tgttccggct
    15901 aaagatgcgt tgctgttaga ttcaacgcat ttatcaattg aagatgtgat taaccaagca
    15961 ttaaatcata tcgctcaata cattaaattt tagtttgttg cttcacatag gatttgtgta
    16021 gcttttatta tcaaccccgt ttaacaggac gttagatgga tgtttatttt taagaagatt
    16081 tattatgtca gaattatcgt ttgctcaact acttgaagaa tcatttgcag ctacaccacg
    16141 tttaggtgat gttgttaaag gtactgttgt tgctatccaa aaaggcttag ttattgttga
    16201 tacaggtttc aaatctgaat ctgcaatcga tgcctcagaa tttactaacg cacaaggtga
    16261 attagaagtt caagtgggtg atgaagtaga tgttgttctt aaagctgtag aagacggttt
    16321 tggtgcaaca gtagtttctc gtggtgatgc aaaacgtaac gaagcttgga ttgctttaga
    16381 gaaagcattt gaagaacaag ctacagttat cggtttcgta aatggtaaag taaaaggcgg
    16441 tttcactgtt gaattaaacg gtgttcgtgc attcttacct ggttcattag ttgatactcg
    16501 tccggttcgt gattctttaa acctagaagg taaagagtac gaattcaaag taatcaaatt
    16561 agatcaaaaa cgtaacaacg tagtagtatc tcgtcgtgct gttatcgaaa cagaaagcaa
    16621 ccaagatcgt gatgcggtat tagcaaactt agttgaaggt tctgaagtta aaggtacagt
    16681 taaaaactta actgactacg gtgcattcgt agatttaggt ggcgttgacg gtttattaca
    16741 tatcacagat atggcttgga aacgtgttaa acacccaagt gaagtggtta atgtaggcga
    16801 tgaagttact gttaaagtat taaaatttga caaagacaaa actcgtgtat cattaggctt
    16861 aaaacaatta ggtcaagatc cttgggctgt aattgctgaa aaccacccgg taaacagcaa
    16921 attaactggt aaagtaacta acttaactga ctacggttgc ttcgttgaga ttttagacgg
    16981 tgttgaaggt ttagttcacg tttcagaaat ggattggaca aacaaaaaca ttcacccatc
    17041 taaagtggtt aacgtaggcg atgtagttga agtaatggta cttgaagttg atgaagaacg
    17101 tcgtcgtatc tcattaggtt taaaacaatg caaagcaaac ccttgggaac aatttgcggc
    17161 aactcacagc aaaaatgata aagtatcagg taaaatcaaa tcaattactg acttcggtat
    17221 tttcatcggt ttagaaggtg gtattgacgg tttagttcac ttatctgaca tttcttggaa
    17281 tgtttcaggt gaagaagcag ttcgtaacta caaaaaaggt gatgaagtag aagctgttgt
    17341 tctacaagtt gatgcagtga aagagcgtat ctctttaggt atcaaacaat tagaatctga
    17401 tcctttcaca aactttgtag atggtactaa aaaaggtgca atcttaacag gtaaagttgt
    17461 agaagttgat gctaaaggcg ttaaagttga attggaaggt ggcgttgaag catttattcg
    17521 tgcaaacgaa gcaactgctg agcgtgtaga agacatcact tctgttattt ctgttggcga
    17581 ttcaatcgaa gcgaaataca ccggtgttga tcgtaaatct cgcgtagtta acttatctgt
    17641 tcgtgcaaaa aacgaagctg aagaatcagc agcaattgca caagtgaaca aagaggaagt
    17701 tgttgtacct aatgcatttg ctgaagcttt caaagcagct aaaggcgaat aattagtata
    17761 gactaatcta aaatgggtat gttttgaaca tacccattta aa
//
LOCUS       DANMCL010000058        17119 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.058, whole genome shotgun sequence.
ACCESSION   DANMCL010000058 DANMCL010000000
VERSION     DANMCL010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17119)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17119)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17119
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.058"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(94..807)
                     /gene="ubiG"
                     /locus_tag="PXF40_001730"
     CDS             complement(94..807)
                     /gene="ubiG"
                     /locus_tag="PXF40_001730"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HDL5803053.1"
                     /translation="MQNVDQQEITKFENMAKTWWDPNGSFKPIHLLNPLRLAYILEKS
                     NGLFGKKVLDVGCGGGILSEAMAKQGAIVTGIDMTSQPLEVAKQHAKESGLEIDYQQT
                     TIENFLAKMTACNQEKFDVITCMEMLEHVPDPLSIIQSCKALLKPDGVLFFSTINRTF
                     KAYMLVIIGAEYVLKMLPKGTHEFEKFIKPAELLAWCDQADLRCQEMRGYHFNPLTEK
                     FWLNNDVSCNYIATLKPNN"
     gene            872..1252
                     /locus_tag="PXF40_001731"
     CDS             872..1252
                     /locus_tag="PXF40_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine dimer DNA glycosylase/endonuclease V"
                     /protein_id="HDL5803054.1"
                     /translation="MTRINLVPPTELCDQHLLAEHRELTRIPNAVAKGKFSLKGQPED
                     YKLGEGHVRFFFNKLTFLKKRYDALHEECLARGFKVQYFWAEHLPQDPSLWLDYQPTE
                     TALTVNRERIALRMPANPRFSERK"
     gene            1349..4045
                     /gene="gyrA"
                     /locus_tag="PXF40_001732"
     CDS             1349..4045
                     /gene="gyrA"
                     /locus_tag="PXF40_001732"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HDL5803055.1"
                     /translation="MSELAKDIIPVSIEDELKTSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLFSMDQNSNTYNKPHVKSARVVGDVIGKYHPHGDFAVYNTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDAPAAMRYTEVRMQKITQELLTDLDKETVDFSPNYDGKEMIPDVLP
                     TKIPALLVNGSSGIAVGMATNIPPHNLGEVLDGCLAYIENEQISVEELMRYIPGPDFP
                     TGAIINGRKGIEEAYRTGRGKVYVRAKASVETTDKGREQIVVTELPYQVNKAKLIEKI
                     AELVKEKKIEGISKIDDYSDKKGISIVIEVKRDAVGEVVLNHLYSLTQMQVTFGINMV
                     ALDNGQPKVLNLRQIIEAFVKHRREVVTRRTIFELRKARERAHILEGLAIALANIDPV
                     IELIRASKTAEEAREGLLARPWALGNVAPMLEAAGVGASRPEDLPEHLGVRDGEYYLS
                     EAQARAILELRLHRLTGLEHEKIVEEYKELLTEIGELIHILTSPERLMEVIREELERV
                     KTDFNDERRTEITAASGDINIEDLIAQEDVVVTLSHAGYVKYQPLSDYEAQRRGGKGK
                     SATKMKEDDFIEKLLVANTHDTILCFSSRGRLYQLKVYQLPQASRGARGTPIVNILPL
                     VKEENERITAILPIPNGEFSADKFIFMATASGVVKKVSLDAFSNVRASGLIALKLREG
                     DELIGVDITDGNSEIMLFSAQGRVVRFAETAVRAMGRTATGVRGIKLSTTEISSEEIE
                     EAEIIETDNEEAEDSSSVSLDKDRVVSLVIPRTEGDILTVTQNGYGKRTVISEYPVKS
                     RATKGVVSIKVNERNGKVVAAVQVEETDQIMLITDAGTLVRTRVAEVSLVGRNTQGVR
                     IIRTAEDEQVVSLERVCEPEDDENESLDALENAETAETSTEE"
     gene            4140..6104
                     /locus_tag="PXF40_001733"
     CDS             4140..6104
                     /locus_tag="PXF40_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803056.1"
                     /translation="MALINLSNAYLGFGDHPLLDHTELHIEPGERVCLVGRNGAGKST
                     LMKILAGEVQLDDGKLVFEKDIVVTRLEQDPPRHIEETVFDYVAEGIAHLADLLKQYH
                     HISLQMQTDYSDELLAKLSAVQSQLEHANGWQFENRIQDTLKLLELAPDKRLCELSGG
                     WVRRAALARALVADPDVLLLDEPTNHLDIEAIAWLENLLLDFKGSIIFISHDRAFIRK
                     MATRIVDLDRGKLVSYPSNYDKYLEEKAEDLRVEALQNELFDKKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKALREERRNRREVQGTAKIQIDNTARSGKIVFEVENAGYEIGGRTL
                     LKNFSTTILRGDKIALIGANGIGKTTLIKLLLGEIQPTSGSVRCGTKLEVAYFDQYRV
                     DLDPEKTVMDNVADGKQDVEVNGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNCLL
                     LAKLLLKPNNLLILDEPTNDLDVETLELLEEMLTDYQGTLIIVSHDRQFVDNTVTECY
                     FFEGEGVVNKYVGGYFDAKQQQENYFAATADKRLNSSKNLQKIEEKAPLAEQEKQKAD
                     QEKTKAEPTKKTKLSYKEQRELDELPAKMEQLEADIEALQAEVNSAEFFAKDPSYTNA
                     QLQKLADTEAALEQAFERWEALENIKNGNI"
     gene            6186..6944
                     /gene="tcdA"
                     /locus_tag="PXF40_001734"
     CDS             6186..6944
                     /gene="tcdA"
                     /locus_tag="PXF40_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HDL5803057.1"
                     /translation="MTERLDNYEQRFGGIGRLYTPEGLEKLRRSHICVIGIGGVGSWA
                     VEALARSGIGKITMIDMDDICVTNINRQIHAMSGTVAQLKTEAMKERIERINPECVVE
                     IIDDFLTQDNLADYLNRGYDYVIDAIDSLRVKAAMIAFCKRNKIKIITTGGAGGQTDP
                     TKIQITDLSKTVQDPLAARVRSLLRKEYGFSNKNKFGVECVSSTQQLIFPQMGEACEV
                     SATMNCANGFGAVTMVTATFGFFAVSRVIDKLLK"
     gene            6991..8358
                     /locus_tag="PXF40_001735"
     CDS             6991..8358
                     /locus_tag="PXF40_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LOG family protein"
                     /protein_id="HDL5803058.1"
                     /translation="MAIHRVNPKGSMEQLSHLEMELLAKNTQGNLHQLYRNCSLAVLN
                     SGVHTDDSRALLSQYPDFEIRLLTREKGVSLELHNPPETAFVDGKMILNIQYHLFAVL
                     RDIVFVNALKNAIRPLEETSLEALTTNTVFSILRNAKAIEMNTDPNLVVCWGGHSINE
                     TEYQYCRAVGQEFGLRELNIVTGCGAGVMEAPMKGAAIGHANQRYKNGRFIGITEPSI
                     IASEPPNPIVNELVIMPDIEKRLEAFVRLGHAIVVFPGGPGTLEELLYIIGIKLNPAN
                     HAQQLPLILTAPKESADYFYAIDQFIGETLGEEARSLYEIIIDDSVLVARKVKQAMIE
                     VKSSRYESGDAYNFNWSLKIEEDFITPFIPTHENMANLNLSLAQPKEQLAANLRRAFS
                     GIVAGNIKPETSDLIEKYGVFKLHGDRKLMEHIDKLLERFVVQHRMKIPTGEAYQPCY
                     EIVKG"
     gene            8378..9925
                     /locus_tag="PXF40_001736"
     CDS             8378..9925
                     /locus_tag="PXF40_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HDL5803059.1"
                     /translation="MYLKHIEISGFRGINHLSLQLRPNMVLIGENAWGKSSLIDALSL
                     IFNLEQALYQFQFKDFHIQYTDTPNQVRDIQLVFTFCEEHQHDLAVQFPAYLAQAAFY
                     IDNHRCVSLAVTGKLHGEQISTDYQFVDQSLKPIQIEQAENAIRQFIYHHPVYRLRDA
                     RLNNRVHNELLLKGSSQLEDDFQRELNALSSLLKYYFLTSQSRYLIKTSMQDTALWWE
                     KVKSLCLRLKQQPELVESAQQHISTLFLFNPRSTVIEKPIILFEDLNAQLHPRMIAIF
                     WELLGFLPSQRITTTNSIELLSQVPLREICRLVRHHDHTQAYWLERHSLGKEDLRKLT
                     FHIHHNRGLALFAKAWILVEGETEVWILQELARLLDIHLEMEGIKIVEFAQCGLRPLI
                     KYARAMGIEWYVLTDGDDSGKRYADTVKSMEEDFAHRLTMLPQKDIEHFFYKAGLRNV
                     FIQLANWRSQEKYPVSYIIKRAIQRSSKPDLAIALANEMGQRGEHSIPTLFKQLFADV
                     LALINKV"
     gene            10148..11182
                     /gene="metN"
                     /locus_tag="PXF40_001737"
     CDS             10148..11182
                     /gene="metN"
                     /locus_tag="PXF40_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HDL5803060.1"
                     /translation="MIQLKNISKQFEVKGKKITALDNVNLEVPRGTIYGVIGASGAGK
                     STLIRCVNLLERPTIGQVIVDGQDLTAMSDKELIHARRNIAMIFQHFNLLSSQTVFEN
                     VALSLRLSNTPKEQVEKKVNELLDLVGLTDRKDVYPANLSGGQKQRVAIARALASDPH
                     VLLCDEATSALDPATTQSILQLLKDINKRLGLTILLITHEMEVVKRICDRVAVIDKGQ
                     LIESGSVSEIFSNPKTELAQKFIQSTFHFELPQEYTEQLSSSPTEHSKPIIKFEFTGR
                     SVDAPLLSMASKKFGIDFSILMSQIDYAGGVKFGFVIAEVSGNPDSIAEAKFYLIDNN
                     VKVEVLGYVG"
     gene            11172..11849
                     /locus_tag="PXF40_001738"
     CDS             11172..11849
                     /locus_tag="PXF40_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803061.1"
                     /translation="MWADFMQEMTPQMWSLVWESTFETVYMGFVATALAVVIGLPIGF
                     LAFLTGKGEILENPRLHQVLDVVINIGRSIPFIILLIILLPFTRLVVGTTLGTTAAIV
                     PLSVSAIPFFARLTSNALLEIPSGLTEAAKSMGATNWQVVTKFYLPESLPILINGITL
                     TLVALIGYSAMAGAVGGGGLGNLAISYGEHRNMVYVKWIATIIIVAIVMISQKLGDHL
                     AKRYDHR"
     gene            11872..12705
                     /locus_tag="PXF40_001739"
     CDS             11872..12705
                     /locus_tag="PXF40_001739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5803062.1"
                     /translation="MSFKKILGVALVSALALTACKEEKKAESTAAPAAQAPAKIKVGV
                     MSGPEHTVAERAAQIAKEKYGLEVEFVLFNDYALPNTAVSKGDLDANAFQHKPYLDKD
                     SQSKGLNNLVIVGNTFVYPLAGYSKKVKNVSELAEGAVIAVPNDPSNLARALILLEKQ
                     GLIKLKDNTNLFSTSVDIIENPKNLKIKEVDTSIAAKALDDVDLAVVNNTYAGQVGLN
                     TQDHGVFVESKDSPYVNIIVARQDNKDAANVQNFIKSYQTEEVYQEAQKHFKDGVVKG
                     W"
     gene            12788..13618
                     /locus_tag="PXF40_001740"
     CDS             12788..13618
                     /locus_tag="PXF40_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family lipoprotein"
                     /protein_id="HDL5803063.1"
                     /translation="MNFKKLLGVALVSALALTACKDEKAQAPATTAKTENKAPLKVGV
                     MTGPEAQMTEVAVKIAKEKYGLDVELVQFTEYTQPNAALHSKDLDANAFQTVPYLEQE
                     VKDRGYKLAIIGNTLVWPIAAYSKKIKNISELKDGATVAIPNNASNTARALLLLQAHG
                     LLKLKDPKNVFATENDIIENPKNIKIVQADTSLLTRMLDDVELAVINNTYAGQAGLSP
                     DKDGIIVESKDSPYVNLVVSREDNKDDPRLQTFVKSFQTEEVFQEALKLFNGGVVKGW
                     "
     gene            13670..14461
                     /gene="metQ"
                     /locus_tag="PXF40_001741"
     CDS             13670..14461
                     /gene="metQ"
                     /locus_tag="PXF40_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HDL5803064.1"
                     /translation="MKIMKLAGAVAIFSLFLTACNDKAEKLKVGVISGPEHKVMEVAA
                     KIAKEKYNRDVELVVFTDYATPNAALDKGDLDLNAFQHKPYLDNQIQEKGYKLVPVGN
                     TFVYPIAAYSKKIKSLAELKDGDTIAVPNDPTNLARALILLEKQDLIKLRADAGLKAT
                     SVDIIENPRKLVIQEIEAPLLPRTLDDVAFSIINTTYAGQNGLTPTKDGIFVEDKDSP
                     YVNLIVARENNQHSEAVKDLVKAYQTEEVYNKANEEFKGAMIKGW"
     gene            complement(14506..15657)
                     /gene="metK"
                     /locus_tag="PXF40_001742"
     CDS             complement(14506..15657)
                     /gene="metK"
                     /locus_tag="PXF40_001742"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HDL5803065.1"
                     /translation="MAINLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACET
                     YVKTGMALVGGEITTSAWVDIENLTRQVICDIGYTHSDMGFDAHSCAVLNAIGKQSPD
                     INQGVDRADPLEQGAGDQGIMFGYATNETEVLMPAPITYAHRLMEQQSKVRKSGKLDW
                     LRPDAKSQLTFAYENNKIIGIDAVVLSTQHAEHISQKELIEGVMEEIIKPVLPSEWLS
                     QNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVSNEILVKLIYQNF
                     DLRPYGLIKMLDLIKPIYRETAAYGHFGRKHFPWEKTDKAEALRAGAGL"
     gene            complement(15840..16682)
                     /locus_tag="PXF40_001743"
     CDS             complement(15840..16682)
                     /locus_tag="PXF40_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HDL5803066.1"
                     /translation="MKVGLVLEGGGLRGIFTAGVLDVFLDEHIHIDGAIGVSAGALFG
                     VNLPSKQKGRALRYNKKYAKDKRYMGLHSLLTTGNIVNRDFAYYELPSKLDPFDQQAF
                     EDSGMDFWVTVTNVETGEPEYIKIDNVFEQMEAFRATSSMPIVSKIVEIEGKKYLDGG
                     VSDSIPVQKFIEMGYDKIIVVLTRPLEYRKKPSSMWLFKRFYKKYPKLVQRWENRYAE
                     YNQAVEQIIQLNEKQQIFVIRPSRTVKISRLETDVNKIQAMYDLGVEDAKNALAGLRA
                     YLAK"
     gene            16742..17059
                     /locus_tag="PXF40_001744"
     CDS             16742..17059
                     /locus_tag="PXF40_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5803067.1"
                     /translation="MADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKD
                     YRIFVKANPQTLPLFLAENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGL
                     QAV"
BASE COUNT         5111 a         3367 c         3923 g         4718 t
ORIGIN      
        1 ttttatcaga tttttgaata tcgtctgtca taatagttgt actaggctta gaaattagcg
       61 gtgtatagta aagatttcgc actattttgc aagttaatta ttcggcttca gcgtagcgat
      121 atagttacaa ctcacatcat tattgagcca aaatttttcg gttaatgggt tgaaatggta
      181 gcctctcatc tcttggcaac gtaaatcagc ctgatcgcac caagctaaca attcggcagg
      241 cttgatgaat ttttcaaatt cgtgcgtgcc ttttggcaac attttcagca catattccgc
      301 cccgataatt accaacatat aggctttaaa agtacggttg atggtagaga aaaacagcac
      361 gccgtcaggt ttgagcaggg ctttacagct ttgaatgata gaaagcggat cgggaacgtg
      421 ttccagcatt tccatacaag taatcacatc gaatttttct tgattacaag cggtcatttt
      481 tgctaaaaaa ttttcaatcg tggtttgttg gtaatcaatc tctaacccac tttctttggc
      541 gtgctgcttt gccacttcaa gcggttgaga ggtcatatcg atgccggtaa caatcgctcc
      601 ctgttttgcc attgcctcac ttaaaatacc gccaccacag ccgacatcta acaccttttt
      661 gccaaataaa ccgttcgatt tttctaaaat ataggctaaa cgcagtggat taagcagatg
      721 aatcggcttg aaactgccgt ttggatccca ccaggtttta gccatatttt caaattttgt
      781 gatttcttgc tgatcgacgt tttgcataaa ctgttcctat ggtaaattta gggcattact
      841 ataacgcatt tagcctaaaa ggaaaatcag aatgacccga attaaccttg ttccgccaac
      901 ggaattatgc gatcaacatc tgcttgccga acatcgtgaa cttactcgga ttccgaatgc
      961 ggtagcgaaa ggcaaattta gcctaaaagg acagccagaa gattacaaac tgggcgaggg
     1021 acacgttcgg tttttcttca ataaactcac gtttttgaaa aagcgttacg atgcgttaca
     1081 cgaggaatgt ttagcaagag gttttaaggt gcaatatttc tgggcggaac atttaccaca
     1141 agatccctct ctctggctag attatcagcc gactgaaacc gctctgactg taaatcggga
     1201 gcgaattgca ttaagaatgc cggcaaatcc acgttttagc gaaagaaaat gaccgcttgt
     1261 acgccttttt gttgcttttt atgctataat ctcgccaatt ttttcgcctt atttaaggct
     1321 cttttactaa taaaattagg aaatttcaat gagcgaatta gccaaagata ttattcccgt
     1381 aagtattgag gacgaattaa aaacctctta ccttgactat gcgatgtcgg tgattgttgg
     1441 gcgtgccttg cctgatgtac gagacggttt aaagccggta caccgccgag tgcttttttc
     1501 aatggatcaa aacagcaaca cctataataa gccgcacgtt aaatctgccc gtgtggtcgg
     1561 tgatgtgatc ggtaaatatc acccacacgg tgactttgcg gtgtataaca ctattgtgcg
     1621 tatggctcaa ccgttctcac tacgttatat gttggtggac gggcaaggta actttggttc
     1681 tattgatggc gatgcaccgg cagcaatgcg ttataccgaa gtgcgtatgc agaaaattac
     1741 gcaggaatta ttaaccgatc tcgataaaga aacggtggat ttctcaccga actatgacgg
     1801 caaagagatg attcctgatg tattgccaac caaaattccg gctctgttag tcaatggttc
     1861 ttcagggatt gcggtcggta tggcaaccaa tattccacct cataatttag gcgaagtatt
     1921 agatggttgc ttggcgtata ttgaaaatga acagattagt gttgaagagc taatgcgtta
     1981 tatcccgggg ccggatttcc cgaccggggc gattatcaac ggtcgtaaag ggattgaaga
     2041 ggcttaccgc accggtcgtg gcaaggtgta tgtgcgcgcg aaagccagcg tggaaacaac
     2101 tgataaaggg cgtgagcaaa ttgttgtaac cgaactgcca taccaagtga ataaggcaaa
     2161 attaattgaa aaaattgccg agctggttaa agagaagaaa atcgaaggca tcagcaaaat
     2221 tgatgactat tccgataaaa aagggatttc gattgttatt gaagtcaagc gtgatgcagt
     2281 gggtgaagtg gtgttaaacc acctttattc tttaacccaa atgcaggtca cgtttggtat
     2341 caatatggtg gcgttagata atgggcagcc aaaagtgctg aacttacgcc agatcatcga
     2401 agcctttgtt aaacaccgtc gtgaagtggt cacacgccgt acgatttttg aattgcgtaa
     2461 agcccgtgaa cgtgcccata ttttagaagg tttggcgatt gcgttagcga atatcgaccc
     2521 ggtaattgaa ttaattcgag cctcaaaaac cgcagaagaa gcccgtgaag gcttattggc
     2581 tcgcccttgg gcattaggca atgttgcacc aatgttagag gctgctggtg ttggtgcttc
     2641 ccgaccggaa gatttacctg aacacttagg agtgcgtgat ggcgaatact atttatctga
     2701 agctcaagcc agagcgattt tagagctacg cttacaccgc ttaaccggtt tagaacacga
     2761 gaaaatcgtt gaagaataca aagaactctt aactgaaatt ggcgaattaa tccacatttt
     2821 aaccagccca gaacgcttaa tggaagtgat ccgtgaagag ttagaacgtg taaaaaccga
     2881 ttttaatgat gaacgccgta ctgaaattac cgcagcctct ggcgacatca acattgaaga
     2941 cttaatcgca caagaagatg tggtggttac gctttctcac gccggctatg tgaaatatca
     3001 gccgttatcc gactacgaag cacaacgccg tggcggtaaa ggtaagtcgg caaccaagat
     3061 gaaagaagat gatttcatcg aaaaactctt ggtggcaaac acccacgaca ccattctttg
     3121 cttctcaagc cgtgggcgtt tatatcaatt aaaagtgtat caattaccgc aagcaagccg
     3181 tggggcaaga ggcacgccga ttgtgaatat tctgccgtta gtgaaagaag aaaacgaacg
     3241 tattaccgcg attctaccga ttccaaacgg tgaatttagt gccgataagt ttatctttat
     3301 ggcaacagct agcggtgtag tgaaaaaagt ttcccttgat gcctttagca acgtgcgtgc
     3361 aagcggtctg attgcgttaa aacttcgtga aggcgatgag ctgatcgggg tagatattac
     3421 tgatggtaac agcgaaatta tgttgttctc ggcacaaggg cgagtagttc gctttgccga
     3481 aacagcagtt cgtgcgatgg gacgtaccgc caccggcgta cgaggtatta aactttctac
     3541 caccgaaatt tcaagcgaag aaattgaaga agctgaaatt attgaaactg acaatgaaga
     3601 ggcagaagat tcctccagcg tcagccttga taaagaccgt gtggtttctt tagtgattcc
     3661 tcgcaccgaa ggcgatattt taaccgtcac ccaaaacggc tacggtaaac gtacggtgat
     3721 tagcgaatat ccggtgaaat cccgagcaac caaaggggtc gtttcgatta aagtgaatga
     3781 acgaaacggc aaagtggttg cggcagttca agtagaggaa accgaccaaa ttatgttgat
     3841 taccgatgcc ggcacgctgg ttcgcacccg agtggcagaa gtcagcctcg ttggacgaaa
     3901 cacccaaggc gtacgtatta ttcgcaccgc agaagacgaa caagttgtta gccttgaacg
     3961 agtctgcgag cctgaagacg atgaaaatga aagcctagac gcattagaaa atgccgaaac
     4021 agcagaaaca tcaactgaag aataatctta actaaacaag cggtcgaatt ttcacaattt
     4081 tttgcaaaaa tagaaggaaa ttcgaccgtt tttggatcat acagtagata ataaaaacta
     4141 tggcacttat caatctttcc aacgcctatt taggctttgg cgatcatcct ttattggatc
     4201 atactgaatt acatatcgaa cccggcgagc gggtttgttt ggtggggcgt aacggggcgg
     4261 gtaaatcgac cctgatgaaa attctggcgg gcgaagttca gcttgatgac ggcaagttgg
     4321 tatttgaaaa agacattgtc gttacacgtc ttgaacaaga tccgccccgc catattgaag
     4381 aaacggtgtt cgattatgtg gcggagggga ttgcccatct tgccgactta ttgaagcaat
     4441 atcaccacat ttccctgcaa atgcagaccg attacagcga tgaactgctc gccaaacttt
     4501 cagcggtgca atcgcaatta gaacacgcta acggttggca gtttgaaaac cgcattcaag
     4561 acaccttgaa actgctggaa ctcgcccccg acaaacgcct gtgcgaactc tcaggcggtt
     4621 gggtacgccg tgcggcattg gctcgggcgt tggttgccga tcctgatgta ttgctgttgg
     4681 acgaaccgac caaccacctc gacattgagg cgattgcgtg gctggaaaat ctgttattgg
     4741 atttcaaagg cagtattatt tttatctcgc acgaccgtgc ctttatccgc aaaatggcga
     4801 ctcggattgt ggatttagat cgaggcaaat tggtttccta cccaagcaat tacgataaat
     4861 acttggaaga aaaagccgag gatctgcgag tagaagcgtt gcaaaatgag ctgttcgaca
     4921 aaaaactcgc ccaagaagaa gtctggatcc gtcaagggat taaggcaaga cgcacccgaa
     4981 acgaagggcg tgtgcgagcg ttgaaagcgt tgcgtgaaga gcgtagaaac cgccgagagg
     5041 tacaaggcac ggcgaaaatt cagatcgaca acaccgcacg cagcggcaaa attgtgtttg
     5101 aagtggaaaa tgccggctat gaaatcggcg gcagaaccct gctgaaaaat ttcagcacca
     5161 ccattttgcg tggcgataaa attgccctga ttggagcgaa cgggatcggc aaaaccacgc
     5221 tgatcaagct gttacttggc gaaattcagc cgacatctgg ttcagtgcgt tgtggcacaa
     5281 aattggaagt ggcgtacttc gaccaatacc gagtcgatct tgaccctgaa aaaaccgtga
     5341 tggacaacgt ggcagacggc aagcaagatg tagaagtaaa cggggtgaaa cgccacgttc
     5401 ttggctatct gcaagacttc ctgttcccgc caaaacgggc gatgacaccg gtgaaagccc
     5461 tctcgggtgg tgaacgcaac tgcttgttgc tggcaaaact gttactcaaa ccgaacaact
     5521 tgctgatttt ggacgaaccg accaacgatt tggacgtgga aaccctcgaa ctgctggaag
     5581 agatgctcac cgactatcaa ggcaccctga ttattgtgag ccacgaccgt caatttgtgg
     5641 ataataccgt aaccgaatgc tacttcttcg agggcgaagg cgtggtgaat aaatatgtcg
     5701 gcggctattt cgatgccaaa caacagcagg aaaattactt cgccgccact gccgacaagc
     5761 ggttaaattc gagtaaaaat ttgcaaaaaa tagaggaaaa agcaccgctt gcggagcaag
     5821 agaaacagaa agccgatcag gaaaaaacga aagcagagcc gacgaagaaa accaaacttt
     5881 cctacaaaga acagcgtgaa ctggacgagt taccggctaa aatggaacag cttgaagccg
     5941 acattgaagc cctgcaagcc gaagtaaata gtgccgaatt cttcgccaaa gatccaagct
     6001 acaccaacgc ccagctacaa aaacttgccg ataccgaagc cgcgttagag caagcctttg
     6061 agcggtggga agcgttggaa aatattaaaa acgggaatat ctaatgtagg ggcgaatgat
     6121 tattcgccct tgatggataa aatgattggg cgaaaaattt ttcgccccta caaatgtgaa
     6181 gcaaaatgac agaaagatta gataactacg aacaacgttt tggtggcatt ggtcgccttt
     6241 atacgccgga aggattggag aaactacgcc gttcgcatat ttgcgtgatt gggattggcg
     6301 gggttggctc gtgggcagtg gaggcattgg ctcgctcagg tatcggtaag atcacgatga
     6361 tcgatatgga cgatatttgc gtgaccaata tcaaccgcca aattcacgca atgagtggca
     6421 cggtggctca actgaaaacc gaagcgatga aagagcggat tgagcggatc aaccctgaat
     6481 gtgtggtgga aattattgat gatttcttaa cgcaggataa tctcgcagac tacctcaatc
     6541 gaggatatga ctatgtgatc gatgcgattg acagtttgcg ggtaaaagcg gcgatgattg
     6601 cgttttgtaa acgcaataag atcaaaatta tcaccaccgg cggggcgggc gggcagaccg
     6661 atccgaccaa aattcaaatt accgatttaa gcaaaacggt gcaagatccg ttggcggcaa
     6721 gggttcgtag cctgttgcgt aaagagtacg gtttcagcaa taaaaacaaa ttcggcgtgg
     6781 agtgcgtttc ttcgactcag caactgattt tcccacaaat gggtgaggcc tgtgaggtgt
     6841 cggcaacaat gaactgtgcc aacggctttg gagcggtgac aatggtgacg gcaacgttcg
     6901 gcttttttgc ggtgagtcgg gtgattgata aactattaaa ataacaagcg gtcatattaa
     6961 atgaattttt tgcaaatcaa ggagtaaata atggcaatac atcgagtcaa cccgaaaggg
     7021 agtatggaac agctttccca tttggaaatg gagttgttgg caaagaatac gcagggtaat
     7081 ttgcatcaac tttatcgtaa ttgctctttg gcggtgctaa attccggtgt gcataccgat
     7141 gacagccgag cgttgttaag ccaataccct gattttgaaa tccgcttatt aacccgtgaa
     7201 aaaggcgtgt cgcttgaatt gcataatcca cccgaaactg cgtttgttga cggcaagatg
     7261 attttgaata ttcaatatca cctttttgcg gtgctgcggg atattgtgtt tgtgaatgcg
     7321 ttaaaaaatg cgattagacc gcttgaagag acttctttag aagccttaac cacgaatacc
     7381 gtattttcga ttttgcggaa tgcgaaagcg attgaaatga ataccgaccc aaatttggtg
     7441 gtgtgctggg gagggcattc gattaatgaa accgaatacc aatattgccg tgccgtcggg
     7501 caagagtttg gcttgcgtga gctgaatatt gtgaccggtt gcggagccgg tgtgatggaa
     7561 gccccgatga aaggagcggc tatcggacac gccaatcaac gttataaaaa cgggcgtttt
     7621 atcggcatta ccgagccgtc tattattgcc tccgagccgc caaacccgat tgtgaatgaa
     7681 ttggtaatta tgccggatat tgaaaaacgg ttggaagcct ttgtgcgttt agggcacgcc
     7741 attgtggttt tcccgggcgg gccgggaacg ctggaagagt tgctgtatat tatcggtatt
     7801 aagttaaacc cggctaacca tgctcagcaa ttaccactga ttttaaccgc cccgaaagaa
     7861 tcggcagact atttctatgc catcgatcaa tttattggcg aaactttagg cgaagaagct
     7921 cgcagtttgt atgaaattat tattgatgac tcggtgttgg tggctcgtaa agtcaagcaa
     7981 gcgatgattg aggtaaaaag cagccgttat gaaagtggcg atgcttataa tttcaactgg
     8041 tcgttaaaaa ttgaggaaga ttttattacg ccatttattc caacccacga aaatatggca
     8101 aacctgaatt taagtttagc acagccaaaa gagcagctgg ctgcgaattt aagacgggca
     8161 ttttcaggga ttgttgcagg taatattaag ccggagacct ccgatttaat tgagaaatat
     8221 ggggtgttta aattacacgg cgatcgtaaa ttaatggagc atatagataa actgttggag
     8281 cgttttgtgg ttcaacaccg tatgaaaatt ccaacgggtg aggcgtacca accttgctat
     8341 gaaattgtaa aagggtaatg ctaacaaggg gtaaggtatg tatttaaagc atattgaaat
     8401 cagtggcttt cgtggtatta accatttatc gctccagcta cgaccaaata tggtattgat
     8461 tggcgaaaat gcgtggggga aatccagtct gattgatgca ttaagcctga tttttaacct
     8521 tgagcaggcg ttgtatcaat ttcagttcaa agatttccat attcaataca ccgatacccc
     8581 caaccaagtg cgggacattc aactggtgtt taccttttgt gaagagcatc agcacgattt
     8641 agcggtgcaa tttcccgctt atttggcaca agccgcgttt tatattgata atcaccgctg
     8701 tgtttcgctt gccgtaaccg gaaaattaca cggagagcag attagcaccg actatcaatt
     8761 tgtggatcaa agcctaaaac cgatccagat agaacaagcg gaaaacgcca ttcggcagtt
     8821 tatttaccat caccctgttt atcgcctgcg tgatgcaagg ctcaataaca gggtgcataa
     8881 tgaattatta cttaaaggat cgtctcaact tgaagacgat tttcaacgtg aattaaacgc
     8941 cctctcttcg ctactgaaat actattttct aaccagccaa agtcgctatt tgatcaaaac
     9001 cagtatgcaa gacaccgcat tgtggtggga aaaagtaaaa tccctctgtt tacgcctaaa
     9061 acagcagccg gaattggtcg aatctgctca gcagcatatt tctactctat ttttgtttaa
     9121 tcctagatct acagtaatag aaaagccgat tattttattt gaagatctga atgctcaact
     9181 acaccctcga atgattgcga ttttttggga actgctcggt tttttaccca gccaacggat
     9241 caccactact aattctattg aattgttatc gcaagtgcct ctgcgtgaaa tctgccgttt
     9301 ggtgcgtcat cacgatcata cccaagccta ttggcttgaa cgccacagtt taggcaagga
     9361 agatttgcga aaattaacct ttcatattca ccataatcgt ggcttggcac tgtttgctaa
     9421 agcgtggatt ttggttgagg gggaaacgga ggtttggatt ttgcaagagc tggcgagatt
     9481 attagatatt catttggaaa tggaagggat caaaatcgtt gaatttgctc agtgtggctt
     9541 acgtccgtta attaaatacg ccagagcaat ggggatcgaa tggtatgtgc tgactgacgg
     9601 tgacgattcc ggcaaacgtt atgcagatac ggtaaaaagt atggaagagg attttgctca
     9661 ccggctcacg atgttgccac aaaaagatat cgaacatttt ttctacaaag caggcttgcg
     9721 gaatgtgttt atacagcttg caaattggcg ttcacaagaa aaatatccgg tgtcctacat
     9781 cattaaacga gcgattcaac gaagctcaaa gcctgattta gccattgcat tagccaatga
     9841 gatggggcaa cggggagagc attcaattcc aactttattt aaacaattat ttgcagatgt
     9901 gctggcattg ataaacaaag tatagaatac aagcggttaa atttgacaaa aaattgccaa
     9961 ttttgaccgc ttgtttgctt gtgatgaaaa ccaatcatac aaaactctaa tttatttcaa
    10021 gtgcaagcta ttattttatg cgttatgctt atttggaata aaaaaatcgg gttagttgat
    10081 tgacatagca ttctagacgt ctaaaataac caaaaataat agttaattga atgtggataa
    10141 atagaaaatg attcagctga aaaatatcag caaacaattt gaggtaaagg gcaaaaaaat
    10201 taccgctctg gataatgtaa acctagaagt accaagaggc actatttatg gtgtcattgg
    10261 ggcatcaggg gcaggaaaaa gtaccttaat tcgctgtgta aatttattag aacgcccaac
    10321 aatcgggcaa gtgattgtcg atgggcaaga tttaacggca atgtcggata aagagttgat
    10381 tcacgctcgc cgtaatattg caatgatttt ccaacatttt aatttgcttt catcacaaac
    10441 tgtatttgaa aacgtggcgt tatcgttgcg tttaagcaat acgccaaaag agcaagttga
    10501 gaagaaagtc aatgagctgt tggatttagt ggggttaaca gatcgtaaag atgtttaccc
    10561 tgcaaatctt tccggtgggc agaaacagcg tgtagcgatt gctcgtgcgt tagccagcga
    10621 tccacacgtt ttgttgtgtg atgaagcgac cagtgcgtta gatccggcga ctacgcaatc
    10681 cattttgcag ctattaaaag atattaataa acgtcttggt ttgacgattt tattaatcac
    10741 tcacgaaatg gaagtggtaa aacgcatttg tgaccgagta gcagtgattg ataaagggca
    10801 gttgattgaa tctggctcgg taagtgaaat tttctcgaat ccgaaaaccg aattagctca
    10861 gaaatttatt caatcgactt tccattttga attaccgcaa gaatataccg agcagctttc
    10921 aagttcgccg actgaacata gtaagccgat tattaaattt gagtttaccg gacgttcggt
    10981 ggatgcacct ttgctttcaa tggcatcgaa gaaattcggc attgatttta gtattttgat
    11041 gtcgcaaatt gattatgcag gcggggtcaa atttggattt gtaattgcag aagtgagtgg
    11101 taatccggat tccattgcag aggcaaaatt ttatttaatt gataacaatg taaaagtaga
    11161 ggtgttaggc tatgtgggct gattttatgc aggagatgac gccacagatg tggagcttag
    11221 tatgggaatc tacttttgaa accgtttata tgggctttgt ggcaacggca ttggcggtag
    11281 tcatcggttt accgattggt ttcttggcgt ttttaaccgg taaaggcgaa attttagaaa
    11341 atccgagatt acaccaagtg ttagatgtcg ttattaacat cgggcgttcg attccgttca
    11401 ttattttatt gattattttg ttgccattta ctcgcttagt tgtgggcaca acattaggca
    11461 caacggcagc gattgttcct ttaagtgttt cggccattcc gttttttgcc cgtttaactt
    11521 caaatgcgtt gcttgaaatt ccgtccggtt taacagaagc ggcaaaatca atgggagcaa
    11581 caaattggca ggtagtgaca aaattttatt taccggagtc attaccgatt ttgattaatg
    11641 gcattacgct aacgctggtt gctttaattg gctactcagc aatggcgggg gctgttggtg
    11701 gcggcggttt aggcaattta gcgattagct atggcgaaca ccgtaatatg gtgtatgtga
    11761 aatggattgc taccattatt attgttgcga ttgtgatgat tagccaaaaa ttgggtgatc
    11821 atttagcaaa acgttacgat catcgttaat tttatttaaa aagaggtttc tatgagtttc
    11881 aagaaaattt taggcgttgc attggtttct gcattagcat taaccgcttg taaagaagag
    11941 aaaaaggcag aatctaccgc tgctccggca gctcaagctc cggctaaaat caaagtaggg
    12001 gtaatgtcag gccctgagca taccgttgca gaacgtgcag cacagattgc aaaagaaaaa
    12061 tatggtttag aagttgagtt cgttttattt aacgactacg ctttaccgaa tactgcagta
    12121 agtaaaggtg atttagatgc aaacgcattc caacacaaac catatttaga taaagacagc
    12181 caatcaaaag gtttaaacaa cttagtgatt gtgggtaaca cctttgttta tccgttagcg
    12241 ggctactcta aaaaagtgaa aaatgtgtct gagttagcag aaggtgcggt aattgcagta
    12301 ccaaatgatc cttcaaactt agctcgtgct ttgattttat tagaaaaaca ggggttaatt
    12361 aaattaaaag ataataccaa tttattctca acttcagtgg atattatcga aaatccgaaa
    12421 aacttaaaaa ttaaagaagt ggatacttca attgccgcaa aagcgttaga tgacgtagat
    12481 ttagcggtgg taaataacac ttatgccggg caggtaggct taaataccca agatcacggt
    12541 gtatttgttg agtctaaaga ttcaccgtat gtgaatatta ttgtggctcg ccaagacaat
    12601 aaagatgcag ctaatgtaca aaactttatt aaatcttacc aaaccgaaga agtgtaccaa
    12661 gaagcacaaa aacactttaa agatggtgta gtaaaaggtt ggtaatttag ctgattttta
    12721 cttaaatggc gattaagcgc taggttaatc gccattttca tctttaaaat ataggaagga
    12781 gcaaacaatg aactttaaaa aattattagg tgtggcgtta gtatctgcct tagcacttac
    12841 tgcgtgtaaa gatgaaaaag cacaagcacc tgctacaaca gctaaaactg aaaacaaagc
    12901 cccattaaaa gtgggtgtga tgaccggccc tgaagcccaa atgaccgaag tggcagtgaa
    12961 aattgcaaaa gagaaatatg gcttagatgt agagttagtg cagtttactg aatacactca
    13021 accaaatgcc gcacttcatt ctaaagattt agatgctaac gcgttccaaa cggtgcctta
    13081 tttagagcaa gaagtgaaag atcgtggtta taaattagcg attatcggca atacgctagt
    13141 atggccaatc gcggcttatt ctaaaaaaat taaaaacatt tccgagttaa aagacggagc
    13201 gactgttgcg attccaaaca atgcaagtaa tactgctcgt gcgttattat tgcttcaagc
    13261 tcacggttta ttgaaattaa aagatccgaa aaatgtgttt gctaccgaaa acgatattat
    13321 cgaaaacccg aaaaatatca aaatcgtaca ggcggatacc tcacttttaa cccgtatgtt
    13381 agatgatgta gaacttgcgg taatcaacaa cacttacgca ggtcaagctg ggttaagtcc
    13441 ggataaagac ggtattattg tggaatctaa agattcaccg tatgtgaatt tagtggtaag
    13501 tcgtgaagat aataaagatg acccacgctt acaaactttt gtgaagtcat tccaaaccga
    13561 agaagtattc caagaagcgt taaaattatt taacggtggt gtggtgaaag gttggtaatc
    13621 agttggacgg catattctgc cgtccttttc ttaaaaggag aaacagataa tgaaaataat
    13681 gaaattagcc ggtgcagttg caattttctc gcttttttta accgcttgta atgataaagc
    13741 cgaaaagttg aaagtcggtg tgatttccgg ccctgaacat aaggtaatgg aagtggcggc
    13801 aaaaattgca aaggaaaaat ataaccgtga tgttgaatta gtggtattta ccgattatgc
    13861 cacgcctaat gcagctttag ataaaggcga tcttgatttg aatgctttcc agcataaacc
    13921 ttatttagat aaccaaattc aggaaaaagg ctataaatta gtgccggtcg gcaatacttt
    13981 tgtttatccg attgcggctt attccaaaaa aattaaatcg ctggcagagt tgaaagatgg
    14041 tgatactatt gcagtgccta atgatccgac taatttagcc cgtgctttaa ttttattgga
    14101 aaaacaagat ttaattaagc tgcgagcaga tgcaggctta aaagcaacca gtgtggatat
    14161 tattgaaaac cctcgtaaat tggtgatcca agaaattgaa gcaccattat tgcctcgaac
    14221 gttggacgat gttgcctttt cgattattaa tactacctac gcagggcaaa acggtttaac
    14281 gccaaccaaa gacggaatat tcgttgaaga caaggattcg ccttatgtga atttaattgt
    14341 tgcccgtgaa aataaccaac attctgaagc cgtaaaagat ttggtgaaag cctaccaaac
    14401 agaagaggtg tataacaaag cgaatgaaga gtttaaaggg gcgatgataa aaggctggta
    14461 attgaagata aataaggcat agattcctat gccttacttt ttatgttaca gacctgctcc
    14521 ggctcttaat gcttcggctt tgtcagtttt ttcccaagga aaatgtttac gaccgaagtg
    14581 tccgtaggca gcggtttcac ggtagattgg tttgattaaa tctaacattt tgattaagcc
    14641 atacgggcgt aagtcaaagt tttggtagat taatttcaca agtatttcgt tgctcacttt
    14701 acctgtgccg aaggtttcga ccataattga tgttgggtca gccaccccga tagcataaga
    14761 aagttggatc tcacagcgat cggctaagcc tgcggcaacg atattttttg cgacataacg
    14821 agcagcataa gcagcagagc gatccacttt tgacgggtct ttaccagaga atgcaccacc
    14881 accgtggcga gccgcaccac cgtaggtatc tacaatgatt ttacgcccgg ttaaaccaca
    14941 gtcacccatt ggaccgccaa tcacaaaacg accggttggg ttgatgaaat atttggtgtt
    15001 ttggctgagc cattcgcttg gtagtaccgg tttgatgatc tcttccatca ccccttcaat
    15061 taactctttt tgcgaaatat gctctgcgtg ttgtgtagaa agcactacgg catcaatgcc
    15121 gataatttta ttgttctcat aagcaaatgt taattggctt ttagcgtcag ggcgtaacca
    15181 atcgagtttg cccgatttac gcacttttga ctgctgttcc attaagcggt gtgcgtaagt
    15241 aattggagcc ggcattaaca cctcggtttc attggtagcg tagccaaaca taatcccttg
    15301 gtcgcccgca ccttgctcta acggatcggc acggtcaacg ccctggttga tgtccggaga
    15361 ttgtttacca atcgcattta ataccgcaca agagtgagca tcaaagccca tatcagagtg
    15421 agtatagccg atgtcgcaaa tcacttggcg ggttaagttt tcaatatcca cccacgcaga
    15481 ggtagtgatt tctcccccta ctaatgccat accggttttc acataagttt cacaagcaac
    15541 gcgtgcttta gggtcttgtt ttaaaatttc atctaatacc gcgtctgaaa tttggtctgc
    15601 gattttatcc ggatgccctt ctgaaaccga ttcagaagta aataaattaa ttgccatttg
    15661 tattcctctc tatcttaaat atggattatt aatagtaggg acgggtccag tgcccgccca
    15721 taaattatat aaaatgtttg gacaggcaca ggaccggtcc ctataaaatt tgtttggaag
    15781 tgtttccgtc tagacgtcta taatatattt tttgaacgtt ttaggcaaat agaatttgtt
    15841 tatttggcta aatatgccct taaaccagcc aacgcatttt tggcatcttc tacccctaaa
    15901 tcgtacattg cttgtatttt atttacatcc gtttcaaggc gactgatttt gactgttctg
    15961 cttggacgaa tcacaaaaat ctgttgtttt tcattgagtt gaataatctg ctcaacggct
    16021 tgattatatt ccgcatagcg gttttcccag cgttgcacta atttcggata ttttttataa
    16081 aaacgtttaa acagccacat cgagcttggt ttcttacggt attcaagtgg gcgagtaagc
    16141 accacgataa ttttgtcata tcccatttca ataaatttct gcaccggaat actgtctgac
    16201 acaccaccgt ctaaatattt tttaccctca atttcgacta ttttggatac aatcggcatt
    16261 gaggaagtag ctcgaaaggc ttccatttgc tcgaacacat tgtcaatttt gatgtattcg
    16321 ggctcaccgg tttcgacatt ggttacagta acccaaaagt ccataccgga atcctcaaag
    16381 gcttgttggt caaacggatc cagtttggaa gggagttcat agtaagcaaa atcccgatta
    16441 acgatattgc cggtggtaag caagctgtgt aaccccatat accgcttatc tttagcgtat
    16501 tttttgttgt atcgcaacgc cctacctttt tgttttgaag gcaaattcac gccaaataac
    16561 gcaccggctg aaacaccgat tgctccatct atatgaatat gttcatctaa aaatacatct
    16621 aacacgccgg cagtaaaaat acctcgcaaa ccaccgcctt ccagcactaa tccaactttc
    16681 atatcattct ccctgtaatt tgtgtattat aacccgaatt atcttgctag gagaaatcac
    16741 aatggctgat gcagaattta tggatttcct gttagatcaa ctaagcccga tttccggttt
    16801 gcgttcgaaa aaaatgtttg gtgaatattg cttgtttttt gataataaaa ttgtcgctat
    16861 tatcagcaaa gattatcgca tttttgtcaa agctaatccg caaaccttgc cgttattctt
    16921 agctgaaaat gccgaacaat ttcactattt tgctaaagga aaagtgcaaa aaatgcacta
    16981 ctggagcatt ccggaattag cgattgaaga agccgatgaa ctggtcaaat ggattcggct
    17041 aggcttacaa gcggtgtaat ttagcgaaaa ttttgtaaaa aaacgctaaa atatgcccgc
    17101 ttgttagggg gggggacct
//
LOCUS       DANMCL010000059        17007 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.059, whole genome shotgun sequence.
ACCESSION   DANMCL010000059 DANMCL010000000
VERSION     DANMCL010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 17007)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17007)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17007
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.059"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..9533)
                     /locus_tag="PXF40_001745"
     CDS             complement(<1..9533)
                     /locus_tag="PXF40_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HDL5803068.1"
                     /translation="MNKHCFRTIFSKTLQRIVVVSELAKLAGKSESESMTSGAILQKI
                     CKIRPLAFSLFCALGFVTLSDNAMAETLIIQADSTAPKNQQPIILQTANGLPQINIQT
                     PNDKGLSHNKYSQFDVAEKGAILNNSRTNTATQQAGMVQGNPYLARGEAKVILNEVNS
                     SKPSVMKGYVEVAGKKAEVIIANPSGLHCDGCGIINADRATLTTGKPQINQGNLEGFV
                     VEKGKVTVAGKGLDNSRVDYTDILAREAKINAGVWSKKETKVITGKNTVKRSNSDNNL
                     QIIHTNQPLAGEEKPTVAIDVGELGGMYAGKIHLIGTEQGVGVRNAGHIGASADTLTI
                     DSQGRIVNSGTFNAQRQVQLNAQHGIDNQGKIENKQGNIQLNSKADIQNSGSIVARGG
                     NIQKKAETKIQQSGETVAKGNITYTARQIHADKNSLIAAGVDVTDTAQGEVRKLEAQS
                     VAGKTIQLTAPEKTTVQGKNIASGKINVAAAEIDANQSQNNAHTVEYSAKSGDIQANS
                     AQFSANQIKLTTPKWLSTEGSQLTAEVIEAQQANLNARGSVWKQTGEQDFRLKAESIH
                     TDSARFSVGGHFEIDGNRLTNNQGLLSSGKRLGLNLNDAVDSVDGKLVAKGELSIRAP
                     LLNNQQGLILSGEKQAITVNTLKNQSGVITSQTEQTLDITSELQNQGGRISASGVAIN
                     AQSLDNREQGEISSVKELALTVSQQVDNRHGVIQSVGNLTLNSTLLDNQGGVLKSATD
                     ITLNVPTVLNNRISENGSLIEAGGSLTMNSFEVENQGTLARQPQPIQGIIASQFVLNS
                     TKQLNNEKGGIYIGSSARFTLSDSLNNRNGEILSWGDLAIFGGKSLTMTNTEGKVSAN
                     NGLEITAKALSGDGDVQAGDIRLNLQENFDITKDINANRSMIIQTEGDILNRKKLAAN
                     DRLQLTANQITNAQNARISSADTRLTATSTVYNEGLINSRSDNDNAQTVIKAQEIHNI
                     GTGNIYGDKVALGAERILNQDKDGTSATIAARQSLGLAAKVIENNTLVYEANKKSGSL
                     IYSGGEIAIGRQLNEQDTVIGNAGQLHNRSSIIEAEGRIQLNADKVANVNSHYRSELE
                     TTDRQTVNEHFILPRDKHNRGGSDVYDNGHLPTINVNQLRKGYYRKTWSYWQKYDEAN
                     LPVITDISQLNATTVLAKPYAQSCANDESVDCTLLPAGNYKKDNPVWTWFNLTPPAED
                     APEMTPEIIQAMNEEDLANQHLSEAEQEKLQKEQGQGIAPVVPARPIEPVRGSTETEA
                     QYQKRLQTYQAELKAYEAAEAAYQRYVLLKPLIDWEAKYGANIQALDEAIAKHNKANL
                     SQEYPHFWNLWIKERMVKENITKASLPAQILAGGDLTYQSDEFINDKSWVIAGKALNP
                     IGRSRIANLDDADAVRQDWELGRRQFSFTEYHGGTRRRHSRYDENDGPLARLKEVHKD
                     MNIFVELENTSPTAYTDYVDAKAANAVKPEGNQVERGNLPDAPNPPTMAIERIPSPNA
                     AAFEVRSMTVDTRLPNQGLYRINPQADSHVLIETDPDFTDKKRWLSSDYMFNALRHDH
                     NNVHKRLGDGFYEQRLIREQINRLTGRQFLGDYTDFDSQYKALMDAGITFAQKFNLRL
                     GITLSPEQVASLTSDIVWFETQTVRLPSGETVSVLVPKVYVLARKGDIDGKGSLISAD
                     ALTINSKEIVNQGTIAGRRLAQFNAERLENSGTLSGGVLAAKVSGDLENIGGKIEADK
                     AILLDIAGNFNHTSTTRTTQIDLDGFKRAETNLDRKALLHVKDENGLLQVQAGNITSA
                     GADIINDGQGQTYLSAKNQLNLTALQVGFDEKMGGGNHYRNEALNDVVISRVQGKGDV
                     VVSGKNLYSEGADLDAKARLALLAENDMVLGSATRSRDYEEYHKTKSGGALAKKTKTT
                     YDNISETEHKGTELTGEDILVKAGHDIQGESLLAVSRSGDIDIIGGNNVTLSSATNQL
                     SEQHIRETKRSGFLNGGEIGFTIGSQKTRQENSLEGAIQSTARNTLGSEGGNIRIQAG
                     NKASVSNVDVLISNEKTAVISGKNGVRVESGKDVINSTDNYEFSQSGLSIALSTPVTD
                     AVQSARQSVQKAKATQNEKLKGVYAVKAAEDAVIAAQNAQKVAETLGNLGNALTENHA
                     AAENPAVKISVSLGTQKQQRESRSQSVTHSKSTLNGGNIALISGAGKVALEGVDTRVK
                     DTLLLDGKLGIESKGVADTYQNNTKNKNHSASVGVFIGLDRDSFGIGFEAGVSGGKGK
                     ENIETETWQNNQLQAGKIVTNSANGKLMLDATNVKANHWEGEVQDFEARSRQDISKYK
                     SEYTEGSVHGTLAVGTTGVNGHVAYNGAKLNTAQVENQTAIDIGKSGMDVKVKKNAHF
                     EGAVMTSQAEKENNRFQAGTLTTGDIENHSELKTRSVAISGGTSGVNPMSALSLLGNK
                     NESERSTTKAAIGENIAITLTEDLNAETTLNHLNRDTQNANQKVTKYDISEVKETQEL
                     VKGIGEIAEKAYQIYTHSEREKVTEAKLELGKAQAQKASKEEIGKLEANLDRLQKEFD
                     KNYGTGSKTKRAVEAVTAALQGLAAKDVGQAAVGLASPYLNAEIKKYTEGDTQANLIA
                     HALLGAVEAAATGNNVLAGAAAGAGSEAAADFIVKTLYKGKSTQDLTEAEKQNVALLS
                     QLASGLASGLIGDSTQSAAVGADIGKRAVENNYLSNWQEQKRSQELKSCHGDARCENQ
                     VRLYWGLVDIGQDVSFVSGAVAGVPENLAESVEGLISMFSSPIETIVAMKELIAREDT
                     LSYIANMTKQEYLAKLDKMQVYYEQAGAVGSFNAGKEFGNMMTDVVTALTGAGALVKT
                     GVGTTAKIVTKSGKELAIPKTRSSASLGTCSFHGDMEVKTDKGYRQISSIKVGDKVLA
                     KNERTGITTYQKVQAHYSNPYDYTVYVEVADSKGKYHTIVSNKIHPFFTQVLSGRVPI
                     SSEGHSYNGEIAKAQWVDAQHLQKGYRLLAESGEWQTVTKVKIKQERLKAYNMTVEKD
                     HTYFIRGTNADNEGVWVHNDCWHALPNDAKQVKNIDGYKAYQFTDPKDGKVVTVVQKD
                     LNRFETPNHQAGVDPHFNRLSQQIDAETGRYLSTDNPVDGLYNRAYLRSETLQKIYAN
                     YEKLPNGNYRNKLTRQEIEQPIDIGHMYGWEHRRLSLAAKELNWSQKQFNDYVNARPE
                     N"
     gene            complement(9585..11360)
                     /locus_tag="PXF40_001746"
     CDS             complement(9585..11360)
                     /locus_tag="PXF40_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HDL5803069.1"
                     /translation="MKTPQNLILSTVLLSASFVAEANSSSLVQQARIDATQQQIDAAQ
                     QHRQQQYQQNQAEKFQPKADVRLETQINDTLTLSNHELPCYPIHQITLIDYSPDNSLT
                     TSQFQWAFEKAVKSFHLTLPHCFGGEGLAVLMKQIQNEIIGKGYVTTRVVTAEQDLRG
                     GKLVLTVIPGKIRNTLVVDSGKVPRFTKLHALTGFTFAEGDILNVRDIEQSLENLKRV
                     PTAEANIEILPSSSEKAEVGDSDLKISYSQAFPFRLNLGLDDAGSKSTGKLQTSATLS
                     IDNIFSANDLFYTSFTHSMKQKGDDNGRRASKNLTLYYSVPFGYWQLAFSHTHHRYHQ
                     EVFGAFDKSYLYAGESDTDKLTFSYLLYRDAKRKTSLSGSLWPRQSQNYIDGSEIEVQ
                     KRRMAGWEAGFSHKEYFPTATLELSANFKRGTAARGALSAPEEDYGEGTSRPKIITAS
                     ASLTKPFFWGKQPWQWQSSLNAQWNKTPLVPQDRFSIGGRYTIRGFDGELTLSGERGW
                     NWRNELSWQFNPNHAFYWAVDGGRVSGWATENQLGHHLMGTAIGFRGGVKGFSYDVFA
                     GRPMRKPEGFKTSDTVAGFNIGYNF"
     gene            11515..12600
                     /gene="queA"
                     /locus_tag="PXF40_001747"
     CDS             11515..12600
                     /gene="queA"
                     /locus_tag="PXF40_001747"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HDL5803070.1"
                     /translation="MLVSDFHFNLPDELIARYPTAERSASRLLHLNGETGEFADQQFV
                     DLYDHINEGDLLIFNNTRVIPARLYGRKPSGGKVEALVERVLDEHRCLAHVKASKAPK
                     EGAELIFGEDKLGEGKGFTATMVARHDTLFELVFNEEQPLFELLQQAGHMPLPPYIDR
                     PDEDADQERYQTVYSKVLGAVAAPTAGLHFDNAMLEKLKAKGVDTAFVTLHVGAGTFQ
                     PVRVETIEDHKMHAEYAEVSQEVVDKILATKAKGKRVIAIGTTSVRSVESAAQAAEKD
                     GKLIAPFFSDTAIFLYPGKTFKVIDALVTNFHLPESTLIMLVSAFAGYRNTMNAYAHA
                     VETKYRFFSYGDAMFINKNPNALSDVP"
     gene            complement(12627..13165)
                     /locus_tag="PXF40_001748"
                     /pseudo
     CDS             complement(12627..13165)
                     /locus_tag="PXF40_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(13178..15460)
                     /locus_tag="PXF40_001749"
     CDS             complement(13178..15460)
                     /locus_tag="PXF40_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HDL5803071.1"
                     /translation="MTLDRFCIALILFHLPILWLPKAFLFVGIVIGTLVLILSVYLRS
                     KLTAVLGLLVCIGYIQIIQVAKNAEKTTASKTPVQFEISKILKQTDYQTAIATLNTGE
                     KIYLNWQSKQPLLLNQFYQAELALRPISARSNIGNFDRQRWYFANHINMTATVRKVET
                     LAKTDYSLRTNWLNKVKAETDALPTQGFLLALAFGERAWLKTEHWGQFQQTATAHLIA
                     ISGLHIGLAMLFGVYFAKGVQWLCLKSELTALQAVGFSLYFARIVSFITAFGYSYLAG
                     FAVPTARALLAIAFVLLCQVLRRHYTPWQYWGRIVALLILIDPLSLLSDSFWLSILAV
                     ASLILWYQYFPLSRFLNDEYRKKITKFNRLWLSLLHLQIGIWLIFSPVQLYFFEGISA
                     FALLANLIIVPLYSFLLVPLILFTLLTDNLFSTWLLADYLAQFSLWLLDPFSNAWFAL
                     SHWQQWQLLSLNLLVLVLLYCKLYRLSYKKWLSAVAVSLLFNLSFYLPKLFNQTQTEW
                     IMFDVGQGLAMAFIYQQNKAVIYDTGSSWQANDGSRNSMAKMEILPYLKRNGIEVEAI
                     FLSHDDNDHSGGVVELLQAYPKARLISSSKVTYHNINPEPCIAGTSWQFGEWQLLAIY
                     PSHIAERAKNQDSCVILAKNDRLKILLTGDSGVEQERQFAHQLGKIDFLQVGHHGSKS
                     STGETLLSITQPAFAVISAGRWNPWKLPNKQIIERLNRRHINVLNTVETGMIRVKFYP
                     SSIEIEQARGAFSPWYKQFY"
     gene            complement(15602..16816)
                     /gene="sstT"
                     /locus_tag="PXF40_001750"
     CDS             complement(15602..16816)
                     /gene="sstT"
                     /locus_tag="PXF40_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HDL5803072.1"
                     /translation="MSQSLSSKILGGNLVLRIAIGLVLGVLLAFINKEWATSVGVLGQ
                     FFVKSLRAIAPILVFVLVLAAIANKEVGSDSKLKPILVLYVLGTFFAALTAVVLSFMF
                     PTTLELTASPDGLTPPQGIGEILKTVIFNLVDNPLVALSNANFIGILAWSIGLGIAFR
                     HGSASSKAFLNDLANAVSFVVKVVIAFAPIGVFGLVAETVAINGIDAFEDYARLLVVL
                     VGAMLFVALVLNPLLVYWKIRRNPYPLTFTCLRESGVTAFFTRSSAANIPVNMNLAKR
                     LGVRDEIASVAIPLGASINMAGAAITVTVLTLAAAYTQGIQPDFATALLLSVVASICA
                     CGASGVAGGSLLLIPLACSLFNIPNDIAAQVIGVGFVIGVIQDSVETALNSSTDVLFT
                     AAVSYAEDQKSA"
BASE COUNT         4385 a         3996 c         3397 g         5229 t
ORIGIN      
        1 aaattctccg gtctcgcatt aacataatca ttaaattgtt tttgactcca atttaattct
       61 tttgccgcta atgataatcg gcgatgttcc cagccataca tatgacctat atcaataggc
      121 tgttcaattt cttgacgggt taatttattg cgataattac catttggcaa tttttcataa
      181 ttagcataaa ttttctgtaa cgtttccgag cgtaaataag ctcggttata tagcccatct
      241 accggattat ctgtcgataa atagcgtccc gtttcggcat caatttgctg agacaaacgg
      301 ttaaaatgtg gatctacccc ggcttgatgg tttggcgttt caaaacgatt gagatctttt
      361 tgaactactg tcaccacttt cccgtctttc gggtctgtga actgataagc tttatagcca
      421 tcaatatttt ttacctgttt ggcatcattc ggtaaagcgt gccaacaatc attatgcacc
      481 catacccctt cattatcggc atttgtacct ctaataaagt aagtatgatc tttctctacc
      541 gtcatattgt aggcttttaa tctttcctgt ttgattttta ccttagtgac agtctgccac
      601 tcaccacttt cagcaagtaa gcgatagcct ttttgcaaat gttgagcatc aacccactga
      661 gcttttgcta tctctccgtt gtaagaatgc ccctccgaag aaatcggcac tctgcccgat
      721 aatacttgcg taaagaacgg gtggattttg tttgacacaa tggtgtggta ttttcctttg
      781 ctgtctgcga cttctacata caccgtataa tcgtatggat tactgtaatg agcttggact
      841 ttctgatagg tggttatacc ggtgcgttca tttttcgcca gcaccttatc gcccacttta
      901 atgctggaaa tctgtcgata acctttatca gttttgactt ccatatcacc gtggaatgag
      961 caagtgccta aactagcgct cgatctggtc ttaggaatcg caagttcttt acctgatttg
     1021 gtgactattt tcgccgttgt ccctacacct gttttaacaa gagcaccagc accggttaat
     1081 gctgtcacca catcagtcat catattgcca aactcttttc cggcattaaa agaacctaca
     1141 gcccctgcct gttcatagta aacctgcatt ttatcgagtt tagctaaata ctcctgttta
     1201 gtcatattag caatatagga gagcgtatct tctcttgcga tcaattcttt catcgccaca
     1261 atagtttcta ttgggcttga gaacatggag atcaatcctt caacgctctc agcgagattc
     1321 tcaggaacac cagcaacggc gcctgataca aaactaacat cttgcccaat atcaactaat
     1381 ccccaatata atcgaacttg gttttcacag cgggcatcac catggcagga ttttaattct
     1441 tgtgagcgtt tctgctcctg ccagttcgag aggtagttat tctccactgc ccttttccca
     1501 atatccgccc caaccgctgc cgattgtgta ctatccccta tcaaacctga agccagtccg
     1561 cttgcaagct ggcttagcaa cgccacattc tgtttctcgg cttcggttaa gtcttgcgtg
     1621 gatttgccct tgtagagggt tttaactata aagtccgctg ccgcttcgct ccctgcgcct
     1681 gcagcagccc ctgccagtac attgttccct gtcgcagccg cttccaccgc acccagtaag
     1741 gcgtgggcaa tcaggttggc ttgggtatcc ccttcggtgt actttttgat ttctgcattt
     1801 aagtatggtg aggctaaacc cactgccgct tgtcccacgt ctttcgccgc taaaccttgc
     1861 aaggctgccg tcaccgcttc caccgctcgt ttggttttac tgcccgtgcc gtagttttta
     1921 tcaaactctt tttgcaagcg gtctaaattg gcttctaatt taccaatctc ttccttgctc
     1981 gctttttgag cttgtgcttt gcccaattcc agcttcgctt ccgtcacttt ttcacgctca
     2041 ctatgcgtgt aaatctgata agccttttct gcaatctcgc ctatgccttt caccagctct
     2101 tgtgtttctt tcacctcact gatatcgtat ttcgtcactt tttgattggc gttttgcgta
     2161 tctcggttga gatgattaag cgtagtttcc gcatttaggt cttcggtgag ggtgatagcg
     2221 atattttctc caatcgctgc ctttgttgtg cttcgctcgc tttcgttttt attgcccagt
     2281 aagctcagtg ccgacatcgg gttcacccca cttgtccctc cgctaatcgc gacacttcgg
     2341 gttttcaatt cactgtggtt ttcaatatcg ccggtggtca gcgtgccggc ttggaagcgg
     2401 ttgttttctt tctccgcttg gctagtcatt accgctccct caaaatgggc gttctttttc
     2461 actttaacgt ccattccact cttgcctatg tcgattgcag tttggttttc cacctgagca
     2521 gtgttcaact tcgctccatt atatgccaca tgaccattta ctcctgttgt ccctaccgcc
     2581 aatgtgccat gtacgctgcc ttctgtgtat tcgcttttat atttgcttat atcttgtcga
     2641 cttcttgcct caaaatcttg tacctcacct tcccaatgat ttgctttgac attggttgca
     2701 tccagcatga gtttaccatt tgcagaattt gtaacaattt tacccgcttg cagttggttg
     2761 ttctgccacg tttcagtttc gatattctcc ttgcctttac ctccactcac tcctgcctca
     2821 aaaccaatac caaaactatc tctatctaaa ccgataaata cgcccacact cgcactgtga
     2881 ttcttattct tagtgttgtt ttgataagta tccgcaacac ctttggattc aatacccagc
     2941 ttaccgtcaa gcagcagggt gtctttcact cgggtatcca ccccttccag cgcaactttg
     3001 cccgctcccg aaatcaaggc aatattgccg ccgttcaggg tgcttttgct gtgggtcacg
     3061 ctttgactac ggctttctct ttgctgtttt tgcgtgccga gactgactga aatcttcacc
     3121 gccggatttt ctgccgcagc atggttttct gtgagtgcat tgccaagatt gcccagcgtt
     3181 tctgccactt tctgagcatt ttgtgctgca atcacggcat cctccgccgc ttttaccgca
     3241 tatacccctt tgagtttctc gttttgtgtt gccttcgctt tttgcaccga ttgccgtgcc
     3301 gattgcaccg catccgttac cggtgtactc aacgcaatgc ttaagcccga ctggctaaat
     3361 tcataattat cggtgctgtt aataacatct ttccctgatt caacccgtac cccgtttttg
     3421 cctgaaatca cggcggtttt ttcgttggaa atcagcacat cgacattgct cacgctcgct
     3481 ttattgccgg cttgaatccg aatattgccc ccttcactgc ccaatgtatt gcgtgccgtg
     3541 ctttggattg ccccctctaa gctgttctct tggcgtgttt tttggctacc gatagtaaag
     3601 ccgatttcac caccgttcaa gaaaccgctg cgttttgtct cacgaatatg ctgttctgaa
     3661 agttggtttg ttgccgaact gagcgttaca ttattaccgc cgataatatc aatatcgcca
     3721 ctgcgtgaga cggcaagaag actttcacct tgaatatcgt gaccggcttt cactaaaatg
     3781 tcttcaccgg ttagttcagt gcctttgtgt tcggtttcag aaatattgtc ataagtcgtt
     3841 tttgttttct tcgctagcgc accaccactt tttgttttgt gatactcttc ataatcgcga
     3901 gaacgtgttg cgctacccaa caccatatca ttttcagcca gtaacgctaa acgcgctttg
     3961 gcatccaaat ccgctccttc actgtaaagg tttttccctg aaaccaccac atcgcctttg
     4021 ccttgcaccc gtgaaatgac cacatcattc aaggcttcat tacgatagtg attgccaccg
     4081 cccatttttt catcaaaacc aacctgtaaa gcggtcaaat tcaactgatt ttttgcagat
     4141 aagtaggtct gcccctgtcc gtcattgatg atgtctgcgc ctgctgaggt gatgttgcct
     4201 gcctgtactt gcagcagtcc attttcatct ttaacgtgca gtagggcttt gcggtcaagg
     4261 ttggtttcag cgcgtttgaa accgtctagg tcaatctgtg tggttcgagt ggtggaggta
     4321 tggttaaaat tgcccgcaat atccagcaaa atcgctttat ccgcttcaat cttgccgccg
     4381 atattctcta gatcaccgct cactttggca gcaagcacgc caccactgag tgtgccacta
     4441 ttctctaacc gttcggcatt aaactgtgct aaacggcggc ctgctatcgt gccttggttt
     4501 acaatctctt tactgttgat ggtaagcgca tcggctgaaa tcaggctgcc tttgccgtca
     4561 atatcacctt tgcgtgcaag gacatacact ttcggcacta ataccgatac cgtttcaccg
     4621 cttggcaagc gaaccgtttg ggtttcaaac caaacaatat cgctggtcaa gcttgccact
     4681 tgctccggcg ataaggtaat gcctaaccga agattgaatt tctgcgcaaa ggtgatgccg
     4741 gcatccatca gggctttata ttggctatca aaatccgtat agtcgcccaa aaattgtctg
     4801 ccggttaagc ggttgatttg ctctcgaatt aagcgctgtt cataaaaacc atcgcccaaa
     4861 cgtttatgca cattgttatg gtcgtggcgt agggcattga acatataatc actgcttaac
     4921 cagcgttttt tatcggtgaa atccggatcg gtttcgatca gaacatggct atccgcttga
     4981 gggttaatgc gataaagccc ttggtttggc aaacgggtat cgaccgtcat tgagcgaacc
     5041 tcaaatgcgg ctgcattcgg gcttggtatg cgttcaatcg ccattgttgg cggattaggg
     5101 gcatcgggta gattaccccg ttcaacctga ttgccttccg gcttcacggc atttgctgct
     5161 ttagcgtcca cataatctgt ataagcggtc ggtgaagtat tttccagctc gacaaaaata
     5221 ttcatatcct tatggacttc ttttaaacga gcgagaggac catcattttc atcgtagcgg
     5281 gagtggcgac gtcttgtgcc tccgtggtac tcagtaaaag agaattggcg ccttcccagt
     5341 tcccaatctt ggcgaacagc atctgcatca tcaaggttgg caattctact gcgaccaatc
     5401 gggtttaacg ctttgcctgc aataacccaa cttttatcgt tgataaattc atcgctttga
     5461 taagtgagat cgccacctgc caagatctgt gccggtaagc tggctttggt gatattctct
     5521 tttaccatac gctctttaat ccacaaattc cagaaatgcg ggtattcttg gcttaaattc
     5581 gctttattgt gctttgcaat cgcttcatct aatgcttgaa tattggcacc atattttgct
     5641 tcccaatcaa ttaacggttt taatagcaca taacgctgat aagccgcttc tgccgcttca
     5701 taggctttca gttccgcttg atatgtttgt agtcgttttt ggtattgggc ttccgtttcc
     5761 gtagagcctc taacaggttc aatcggtctt gccggaacca ccggtgcaat gccttgccct
     5821 tgttccttct gtaatttttc ctgctctgcc tcacttaaat gctgattcgc taaatcttct
     5881 tcattcattg cttgaataat ttcaggcgtc atttccggtg catcttcagc tggtggtgtt
     5941 aaattaaacc acgtccatac tgggttatct tttttataat tacctgcagg taatagagta
     6001 caatctacac tttcatcatt cgcacagctt tgagcatagg gttttgccaa tacggtcgtg
     6061 gcattcagct ggctaatatc ggtaattacc ggcaagtttg cttcatcata cttttgccaa
     6121 tagctccacg ttttgcgata gtagcctttg cggagttgat tcacattaat tgtcggcaaa
     6181 tgcccgttat catatacatc acttccacct cgattatgct tatctcttgg caaaataaaa
     6241 tgttcgttca cagtttggcg atcagtggtc tccaattccg aacgataatg actatttaca
     6301 ttcgctacct tatccgcatt caactgaata cgcccttcag cttcaataat actgctgcgg
     6361 ttatgtagct gccctgcgtt gccaataacg gtatcttgct catttaattg acgtccaatc
     6421 gctatctctc ctccgctata tattaatgaa ccgcttttct tattcgcttc ataaactagg
     6481 gtattatttt caattacttt agccgctaaa ccgagagatt gacgagcagc aatagtggca
     6541 gaggtcccgt ctttatcttg atttagtatc ctctccgcac ctaacgccac cttatcgcca
     6601 taaatattcc ctgtgccgat attgtggatt tcttgagctt taatcacagt ttgagcgtta
     6661 tcgttgtccg agcggctatt gattaagcct tcgttataga cggttgaagt tgcagtcaaa
     6721 cgggtatctg ccgagcttat tcgggcattt tgtgcattgg ttatttggtt tgccgtgagc
     6781 tgcaagcggt catttgcggc taattttttg cgattgagaa tatcgccctc agtctgaata
     6841 atcatcgacc tattcgcatt gatatctttg gtaatatcaa agttctcttg caaattcagg
     6901 cgaatatcgc ctgcttgtac atcaccatca ccggataacg ctttggcagt gatctccaaa
     6961 ccattatttg cagaaacttt tccctcggta ttcgtcattg tgagtgattt tccgccgaaa
     7021 atagccagat cgccccaact taaaatttcc ccattacggt tatttaagct gtcgctgagg
     7081 gtaaatcgtg ctgatgagcc gatataaata ccgccttttt cattattgag ctgttttgtg
     7141 ctgttcagta caaactgcga tgcaataatc ccctgtattg gctgaggttg gcgtgccaag
     7201 gtaccttgat tttccacctc gaaactgttc atcgtaagtg agccacctgc ttcaataagt
     7261 gagccatttt ccgagatccg attatttaag acagtcggta cattgagcgt gatatctgtg
     7321 gccgatttca gtaccccacc ttggttatcc aaaagcgtgc tatttagggt gagatttccc
     7381 acactttgaa taacaccgtg ccgattatct acttgttggg aaaccgtgag cgctaactct
     7441 tttactgaac taatttctcc ctgctcacgg ttatctaagg attgagcgtt aatcgcaaca
     7501 ccgctggcgg aaattcgccc gccttgattt tgcagttcgc tagttatatc aagggtttgc
     7561 tccgtttgag aggtgatcac ccccgattga ttttttaacg tattgaccgt aatcgcctgt
     7621 ttttcgccac tcaaaatcag accttgctga ttattcagca atggagcacg aatagataac
     7681 tcgccttttg caaccaattt gccatcgact gaatccacag catcatttaa atttagccct
     7741 aaacgcttgc cactacttaa tagcccttgg ttatttgtta aacgattacc gtcaatctca
     7801 aaatgtccac ccactgaaaa gcgagccgag tcagtatgga tactctctgc ttttaggcga
     7861 aaatcctgct caccagtctg cttccaaacc gagccacgag catttaaatt cgcttgttgg
     7921 gcctcaatca cctctgcggt tagctggctt ccttcagtgg aaagccattt tggggtggtg
     7981 agcttgatct gatttgcact aaactgcgca ctattcgcct gaatatcgcc cgattttgca
     8041 ctgtattcaa cggtatgggc attattttgg ctctgattgg catcaatctc agctgccgcc
     8101 acgttaattt tccccgaagc gatatttttt ccctgcacag tggttttttc tggggcagtg
     8161 agttgaatag ttttccctgc cacagattga gcttccagct tccgtacttc accttgtgca
     8221 gtgtcggtta cgtccacccc agcggcaatc agtgagtttt tgtcggcgtg aatttggcgg
     8281 gcggtgtagg tgatattgcc ttttgcgacc gtttcgccac tttgctggat tttagtttcg
     8341 gcttttttct gaatattgcc acccctcgcc acgatggaac cgctattttg aatatcggct
     8401 ttcgagttaa gctgaatatt gccctgttta ttttcaattt tgccttggtt gtcaatcccg
     8461 tgttgggcat tgagttgcac ttgtctttga gcgttgaacg tgccgctgtt tacaatccgc
     8521 ccttgactgt caatggtgag cgtatcggca cttgcaccga tatgcccagc gttacgcacg
     8581 cccacgccct gttccgtacc aatcaggtgg attttgccgg catacattcc gcccagctca
     8641 cccacatcaa tcgcaactgt gggcttttct tcccctgcaa gcggttgatt tgtatgaata
     8701 atttgcaaat tgttgtccga atttgaccgc ttgacggtgt ttttgccggt aatgacttta
     8761 gtctcttttt tcgaccagac accggcgttg attttcgctt ctcgggcgag gatatcggtg
     8821 taatccactc ggctgttgtc cagccctttg ccagcaaccg ttaccttgcc tttttccact
     8881 acaaaacctt ctaaattgcc ttgatttatc tgtggttttc cggtggtcag cgtggctcgg
     8941 tcggcgttga taataccgca gccgtcacag tgcaagccgc tcgggttggc gataatcact
     9001 tccgcttttt tgccagccac ttccacataa cctttcatta ccgaaggctt actggaattg
     9061 acttcattta aaatcacctt cgcttcgcca cgggcaagat acgggttgcc ttgcaccata
     9121 ccggcttgtt gggtggcggt gttggtgcgg ctgttgttga gaattgcccc cttctccgct
     9181 acgtcaaatt ggctgtattt attgtgggaa agccctttat cgttcggggt ttgaatattg
     9241 atttgtggca gcccgttggc ggtttgcaaa ataatcggtt gctgattttt cggggcagtg
     9301 ctatcggctt gaataatcaa agtttccgcc atagcgttgt ctgataaggt aacgaatccc
     9361 aacgcacaga acaagctgaa cgcaagcggt cgaattttgc aaattttttg taaaattgca
     9421 ccgcttgtca tactttcact ttctgattta cctgctaatt ttgctaattc agataccacc
     9481 acaatacgtt gtaaggtctt gctgaaaata gtgcgaaaac aatgcttatt cataataatt
     9541 ccttaatagc acaatatact taatacaata tgcccaatca ttcattaaaa attgtaacca
     9601 atattaaaac cggcaacggt gtctgaggtt ttaaaccctt ccggttttcg catcggtcta
     9661 ccggcaaaca cgtcataact aaatccttta actccacccc gaaacccaat ggctgttccc
     9721 attaaatgat gtccgagctg attttccgtt gcccaaccgg acactcgacc accatctacc
     9781 gcccaataaa aagcgtggtt cggattaaat tgccagctca actcattacg ccagttccag
     9841 ccccgctcac cggaaagagt cagttcaccg tcaaatccac gtatggtgta acgcccgcca
     9901 atcgaaaaac ggtcttgcgg aaccagaggg gttttattcc attgggcatt taggctactt
     9961 tgccactgcc atggctgctt gccccaaaaa aacggtttcg tcaggcttgc acttgccgtg
    10021 atgattttag ggcgagaagt cccttcgcca taatcttcct cgggagcaga taatgcccct
    10081 cgtgctgccg tacctcgttt gaaattagcc gaaagctcaa gcgtagcggt cgggaaatat
    10141 tctttatgcg aaaaacccgc ttcccaacct gccattcggc gtttttgtac ttcaatttct
    10201 gagccgtcaa tatagttttg cgactggcgt ggccaaagtg aaccggacaa gctcgtttta
    10261 cgtttggcat cacgataaag caaataagaa aaggttaatt tatcggtatc actttcaccg
    10321 gcgtagagat agctcttgtc aaaggcacca aatacttctt gatgataacg atgatgagtg
    10381 tgtgaaaatg ctaactgcca atagccaaac ggcacggaat agtaaagcgt gagattttta
    10441 ctggcacgtc tgccgttatc atcacctttt tgtttcatcg aatgggtaaa agaggtatag
    10501 aacaggtcat ttgccgaaaa aatattatct atagacagag tggcggaggt ttgtaatttg
    10561 cctgtggatt tcgagccggc atcgtccagc ccaagattta agcgaaatgg aaacgcttgc
    10621 gaatagctga tttttaaatc actgtctccc acctccgctt tttcgcttga gctgggtaaa
    10681 atctcaatat ttgcctccgc cgtcggcacc cgttttagat tttccagaga ctgctcaata
    10741 tctcgcacat tcagaatatc gccttcggca aaagtaaaac cggttaaggc gtgcagcttg
    10801 gtaaaacgcg gtactttgcc gctatctacc actaaagtat tgcgtatttt gcccggaatc
    10861 acggttaaaa ctaattttcc gccacgtaaa tcttgctccg cagtaaccac tcgtgtagtg
    10921 acataacctt tgccaataat ttcattttgg atttgcttca tcaacacagc taacccttca
    10981 ccaccaaagc agtgaggtaa tgtcaaatga aatgatttta ctgctttttc aaacgcccat
    11041 tggaattggc tggtagtcag agaattgtca ggagaatagt caatgagagt gatttgatga
    11101 atggggtaac aaggcaattc gtgattggaa agagtaagtg tatcattgat ttgtgtctcg
    11161 agccgtacat cagctttcgg ctggaatttt tctgcttgat tttgttggta ttgctgttgg
    11221 cgatgttgct gggcagcatc aatttgttgt tgagttgcat caatgcgtgc ttgttgtaca
    11281 aggcttgaag aatttgcttc agcaacaaaa gaagcactta acaataccgt gcttaaaatc
    11341 agattttgtg gggttttcat aagatcaaat aagtaagaca ttcaacgttt ttagtctata
    11401 aaaatttatg ttgttttgca aactccgttt tatggagctt tatacatatc tgacgacttt
    11461 ggttttttat gctattatct ccgccatttt tatactatag agaatagaat aaccgtgtta
    11521 gtttcagatt ttcatttcaa cttacccgat gagctgattg ctcgctaccc gactgccgaa
    11581 cgctctgcca gccgtttatt acacttaaat ggcgaaacag gcgaatttgc cgatcaacaa
    11641 tttgtggatt tatacgatca tatcaacgaa ggcgatctat tgatcttcaa taacactcga
    11701 gtgatcccgg ctcgccttta cggtcgaaaa cctagtggcg gcaaagtaga ggcattagtg
    11761 gaacgggtgc tagatgaaca ccgctgcttg gctcacgtta aagcctcaaa agcaccgaaa
    11821 gaaggggctg aattgatctt tggggaagat aagctaggtg aaggcaaagg ctttacggcg
    11881 acaatggtag ctcgccacga tactctgttt gaattggtgt ttaacgaaga gcaaccgtta
    11941 ttcgaattgc tacagcaagc tggtcatatg cctcttccac cttatatcga ccgccccgat
    12001 gaagatgctg accaagagcg ttatcaaacc gtttatagca aagtgttagg tgcagttgcc
    12061 gcccctaccg ccggtttgca ttttgacaat gcaatgcttg aaaaactaaa agcaaaaggg
    12121 gtggatactg ccttcgtaac attgcacgtt ggtgccggca ctttccagcc ggtacgggta
    12181 gaaaccattg aagatcataa aatgcacgcc gaatatgccg aagtgagcca agaagtagtc
    12241 gataaaattc tcgcaacgaa agccaaagga aaaagagtga ttgcaattgg tacgacatca
    12301 gtacgttcgg ttgaaagtgc cgcccaagcg gctgaaaaag atgggaaatt gattgctccg
    12361 ttcttttctg acaccgctat tttcctttac ccgggaaaaa cctttaaagt cattgatgcg
    12421 ttagtcacca atttccattt accggaatcc acgctaatta tgttagtctc agcatttgcc
    12481 ggctatagaa atacgatgaa tgcctacgcc cacgcagtag aaactaaata ccgttttttc
    12541 agctatggcg atgcgatgtt tatcaataaa aacccaaatg cgttgagtga tgttccttaa
    12601 tttatgaggg ttataaggga ataacattat gaacaaaaac aatcttccaa ccattttaag
    12661 ggattgtttt caatatattc aataatttgg aagtacgatg tttcattacg aataatgtgt
    12721 tcataataat tcctttgcca aatttcagaa atatcggtat tttgacgaac ccatttagtt
    12781 acgccaattt taaaaccacg cacaatagag ccgattgttc gtgatgttcc ccgtaagggc
    12841 gaaacatttt tcgcccttat acatggggca aatgatgatt tgcccctaca gtttcgacga
    12901 tttcaataat gccatgtaaa tgattaggca taatcacaaa gctatgcaag cttacatttg
    12961 gaaaatgatc gggtatatct tcccaacatt gacgtacaat attccctatc ttattaagcc
    13021 tcatttcatc atcaacaatc tcaccgagaa aatggtgttt atttttacaa caaatagtaa
    13081 tgaaatagaa tccttgtgat cggtaatcat aatgctttag acgaattgaa cgcctcctat
    13141 gaatctccgg ctgatatttc tgcatttttc ttattcctta ataaaactgc ttataccaag
    13201 gggaaaatgc cccccttgcc tgctcaattt caatagaact tgggtaaaat tttactctta
    13261 tcattcccgt ttctacggta tttaatacat taatatgtct tctgtttaat ctctcaataa
    13321 tctgtttatt cggtaatttc catgggttcc atcttccagc agaaatcact gcaaatgctg
    13381 gctgggtaat cgataataaa gtttcgccag tgctgctttt gctaccgtga tgtccaacct
    13441 gtagaaaatc aattttgccg agctgatggg caaattggcg ttcttgttcc acgccagaat
    13501 cccctgtcag taatatcttc aagcggtcgt ttttggctaa aataacgcaa gagtcttggt
    13561 ttttagctcg ttctgcaatg tgtgacgggt aaattgccaa taattgccat tcgccaaatt
    13621 gccacgatgt tccggcaata caaggctcgg gatttatatt gtgatacgtc accttgcttg
    13681 aactaattaa ccttgctttt gggtatgctt gcaataactc cactacccca cctgaatgat
    13741 cattatcatc gtgacttaga aaaatcgcct ctacctcaat gccatttcgc tttaaatacg
    13801 gcaagatttc catttttgcc attgaattgc gactaccatc atttgcttgc caactggagc
    13861 cggtatcgta aattaccgct ttattttgtt gataaatgaa cgccattgcc agcccttgcc
    13921 caacatcaaa cataatccat tctgtttggg tttgattaaa gagcttaggg agataaaaac
    13981 tcagattgaa caatagggat accgctactg cacttaacca ctttttataa gatagccgat
    14041 ataatttgca atacagcaat actaaaacca ataaattcag tgaaagtaac tgccactgtt
    14101 gccaatggct taatgcaaac cacgcattag aaaatggatc taacagccat aggctaaatt
    14161 gagcaagata gtccgccaac agccacgttg aaaacagatt gtcggtcaag agcgtaaata
    14221 aaataagcgg tacaagcaaa aagctataca acggcacaat aatcaggttg gcaagcagtg
    14281 caaaagcaga gatgccctca aaaaagtaga gttgaaccgg tgagaaaatc agccaaatgc
    14341 cgatttgtaa gtgcaaaagc gataaccaca agcggttaaa ttttgtgatt tttttacgat
    14401 attcatcgtt taaaaatcgg ctaagaggaa aatattgata ccataaaatt aaacttgcta
    14461 ccgctaaaat tgagagccaa aaactatcag aaagcaggct caatgggtca attaaaatca
    14521 gtaacgccac tattctcccc caatattgcc aaggggtata gtgtcgccgc agaacttggc
    14581 aaagcaagac aaacgcaatc gccagcaacg ctctggcggt cggcacggca aaaccggcta
    14641 aatagctgta accaaatgcg gtgatgaagc taactattct tgcaaaataa agtgaaaatc
    14701 cgaccgcttg taatgcggta agctcgcttt tcaagcaaag ccattgcacg cctttggcaa
    14761 agtaaacacc aaacaacatt gccagcccga tatgcaagcc tgaaatggca attagatggg
    14821 cagtagcggt ttgttggaat tgcccccagt gttctgtttt cagccacgcc ctttcaccaa
    14881 aagccagagc caataaaaag ccttgcgtag gcaaagcgtc cgtttcagct ttcactttat
    14941 tcagccaatt tgttcgcaag ctataatcag ttttggctaa tgtttccacc ttgcgaaccg
    15001 ttgctgtcat attgatatga ttggcaaaat accaacgctg tcggtcaaaa ttaccgatat
    15061 tgctacgagc tgaaatagga cgaagagcca gttcggcttg atagaattga ttaagtaaca
    15121 acggctgttt cgattgccag ttcaagtaga tcttctcgcc tgtatttagt gtcgcaatcg
    15181 ctgtttgata atcggtttgt tttaagattt tactgatttc aaattgaaca ggcgttttac
    15241 tagcagtcgt tttttccgca ttttttgcaa cttgaatgat ctgaatatag ccaatacaaa
    15301 ccaataagcc gagtacagcc gttaattttg agcgtagata aacactcaat atcagcacta
    15361 aggttcctat tactataccc acaaatagaa acgctttagg caaccataaa ataggcagat
    15421 gaaatagaat cagggcaata caaaaacggt ctaaagtcat aattcggctt actttttaaa
    15481 gctgagtatg ccgtttgtgc ttaatatttt cagaataaat tttcagattt tcgacacagt
    15541 tcgcaaaaat acttgaaaaa ataaaggcag actttttagc ctgccttata aagaagagat
    15601 attatgctga tttttgatct tcagcgtaac ttactgctgc agtgaataat acgtctgttg
    15661 atgaatttaa tgcggtttca accgagtctt gaatcacacc aatcacaaaa cccaccccaa
    15721 ttacttgagc agcaatatcg tttggaatat taaataaact acaggctaat ggaatcaata
    15781 ataatgaacc gcctgccaca cctgatgcgc cacaagcaca gattgatgca actacgctta
    15841 atagtagtgc tgttgcgaaa tcaggttgaa taccttgtgt ataagctgcc gctagggtta
    15901 atacggttac agtaatcgct gcacctgcca tattaatact tgcacctaat ggaatagcta
    15961 cagaagcgat ctcatcacga acgcccaaac gcttggctaa attcatattc accggaatgt
    16021 tggctgctga actgcgggta aagaatgccg ttacaccact ctctcgtaaa caggtaaatg
    16081 taagtgggta tgggttgcgg cgaattttcc aatacactaa taatggattt agtactaatg
    16141 ccacaaataa cattgcgcca actaagacta ctaataaacg tgcgtaatct tcaaacgcat
    16201 caataccatt gatggcaaca gtttcagcta ctaaaccaaa taccccaata ggcgcaaatg
    16261 caatcacaac tttcacaaca aacgaaactg cgttagctaa atcatttaag aatgcttttg
    16321 aacttgccga accatggcgg aatgcaatcc ctaaaccgat agaccacgca agaataccga
    16381 taaagtttgc attacttaat gcgactaatg gattatcaac taagttaaaa ataacggttt
    16441 ttagaatttc accaatgcct tgtggcgggg ttaaaccgtc tgggcttgca gtaagctcta
    16501 atgtagttgg gaacataaag cttaaaacaa cagccgttaa tgccgcaaaa aatgtaccta
    16561 atacataaag caccagaatc ggctttaatt tgctatctga accaacttct ttatttgcaa
    16621 tcgcagccaa aactaataca aatactaaaa taggcgcaat ggcacgtagt gatttcacaa
    16681 aaaattgacc taatacacca acgctggtag cccattcttt attaataaat gccagcaata
    16741 cccctagcac taaaccaatg gcgatacgta atactaaatt accgccaaga atttttgatg
    16801 ataatgattg actcataacc cttcacttct gtaagacaac aaaaaataag gataaataaa
    16861 atttatccgc ctgaaaaaat aggtttataa gattagcgga aaataaacaa atatggaata
    16921 aacaagcggt ttatttttca gattttttta caaaaaagtg aagtttttta cattccatgg
    16981 ctatcatatt attttttcct taggttc
//
LOCUS       DANMCL010000060        16846 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.060, whole genome shotgun sequence.
ACCESSION   DANMCL010000060 DANMCL010000000
VERSION     DANMCL010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16846
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.060"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(374..889)
                     /locus_tag="PXF40_001751"
     CDS             complement(374..889)
                     /locus_tag="PXF40_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000168322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5803073.1"
                     /translation="MAGINKVIIVGNLGNDPEMRTMPNGEAVANISVATSESWTDKNT
                     GARREVTEWHRIVFYRRQAEVCGQYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQG
                     DVLQMLGSRQGNDMGGQQGGWGNSAPAGNSYNQGNSNYGYNQTQSAAPQSKPAPQPEP
                     AMNNFDDDIPF"
     gene            1044..3872
                     /gene="uvrA"
                     /locus_tag="PXF40_001752"
     CDS             1044..3872
                     /gene="uvrA"
                     /locus_tag="PXF40_001752"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HDL5803074.1"
                     /translation="MQHIDIRGARTHNLKNINLTLPRDKFIVITGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLAPVVKERKG
                     EHVKLLENLTASGYLRARIDGEICDLSDPPALELQKKHTIEVVVDRFKVRADLATRLA
                     ESFETALDLSGSTAIIADMDDPNAEEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGA
                     CPTCDGLGVEQFFDAKKVVQNEEVSLAAGAIKGWDRRSFYYFGLLKAVAEHYGFDLET
                     PFGQLPKKYQNIILNGTKEEIEFVYVNDRGDKVKRKHAFEGVLNNMARRYKETESNSV
                     REELAKYINNRPCMDCEGSRLRREARYVFLDKTNLPMVSEKSIGEALTFFEELKLAGQ
                     KEKIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQIGAGLVGVM
                     YVLDEPSIGLHQRDNERLLNTLVHLRNLGNTVIVVEHDEDAIRAADHIVDIGPGAGVH
                     GGQVIAQGTAAEIMQIEESITGQFLSGKQKIEIPAQRVPYEPTKLLTLSGASGNNLKK
                     VKLEIPVGLFTCITGVSGSGKSTLVNDTLFPLAQNALNRAENSDVAPYESIDGLSHFD
                     KVIDIDQSPIGRTPRSNPATYTGLFTPIREIFAGTQEARARGYNVGRFSFNVRGGRCE
                     ACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLEMTVEEAREF
                     FAPMPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTGKTLYILD
                     EPTTGLHFADIKQLLGVLHRLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGEI
                     IATGTPEEVAKDKRSHTARFLKEILAKG"
     gene            complement(3964..5697)
                     /gene="dauA"
                     /locus_tag="PXF40_001753"
     CDS             complement(3964..5697)
                     /gene="dauA"
                     /locus_tag="PXF40_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HDL5803075.1"
                     /translation="MLNKWFLTKNAFLAVKPFSALKDALNAGYGKQHLIRDIISGLTV
                     GVIAIPLSMALAIASGVPPQHGLYTAIVAGIVIALTGGSRFNISGPTAAFVVILYPVT
                     QQFGLSGLLMATMLSGGILVLMALLRLGRLIEYIPLPVTLGFTCGIGIVIATLQIKDF
                     LGLSIEKMPEHYLGKLEAIFSALPTINWADTLVGVVTLLVLTRWHKLRLPIPGHLPAV
                     FIGTLLSLLLIHFGQNVATIGSAFHYTLSDGTTGYGIPSVLPEFVLPWNLPNAEGNRI
                     DWNLTTIQALLPAAFSMAMLGAIESLLCAVVCDNMTDTKHHSNNELLAQGLGNIASPF
                     LGGITATAAIARSAANVRSGAVSPISSVVHALLVLFALLFLAKALSYLPLSSMAALLL
                     VVAWNMADIPQIIQLTRRSGKNEIAVLLTCITLTVLFDMVIAITVGVLLASLLFIRTI
                     AEMTKSFEMAHPTDLNDVLVYRISGPLFFAAADNLFADLHNKTVHTDHQIKHIVLQCD
                     AVTVLDAGGIHALTRFVQHMLPHQQLHLCNVQFQPMRMLVRSQKTVNEIPQIQFSSDL
                     ESAFDKIRQAN"
     gene            5939..6871
                     /locus_tag="PXF40_001754"
     CDS             5939..6871
                     /locus_tag="PXF40_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803076.1"
                     /translation="MDSLIHFLSAFLTNITWIGALELGLIYSLVALGVLISYKILDFP
                     DLTADGSFPLGGAVCVISILNQVDPWLATLYGTLAGAVAGMVTASLHIGFKIEKLLAS
                     ILMMIALYSINLRIMGMPNIAILGETTIYDVMPIESDLQLALVRLVMALLVVIIVKGL
                     FDLFFATEIGLAVRATGTNSRMAKAQGIAINKMTILGMAISNALIALGGALYVQSNGG
                     VDISIGVGTIVIGLAAVIIGEAIFSVKRIIWLTFAVIIGSILYRFFIALALNNETLNG
                     IGFGPQDLNLITALLVVIVLAVPRIKHKLLGKRG"
     gene            6873..7670
                     /locus_tag="PXF40_001755"
     CDS             6873..7670
                     /locus_tag="PXF40_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803077.1"
                     /translation="MIELNNLFITFNKGTAIENPVLRGLSLKVEQGEFVSVIGSNGAG
                     KSTLLNAISGDCAVDSGEILIQGNKVNQSTTWQRANQVARVFQDPMAGTCESLTIEEN
                     MALAYQRGRKRGLGFAIKRQMRELFKDKLALLGLGLENRLTDQMGRLSGGQRQAVSLL
                     MASLQPSNILLLDEHTAALDPKTTDFVLELTNKIVREQKLTTLMVTHSMRQALDYGDR
                     TVMLHQGQVAFDVSGEQRQKMDVPDLLQLFQQSRHEQLSDDGLLLGN"
     gene            7757..7978
                     /locus_tag="PXF40_001756"
     CDS             7757..7978
                     /locus_tag="PXF40_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803078.1"
                     /translation="MLSIFKTPVEKETLDDWAKISVDVAKVAILAIPVILFGKEPTLI
                     KLTNLALLVLSIYVFLTLGRKLRQLKEVL"
     gene            8161..10086
                     /locus_tag="PXF40_001757"
     CDS             8161..10086
                     /locus_tag="PXF40_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HDL5803079.1"
                     /translation="MTKYDDKIQHAFSENGLLSQNISGFRPRQAQLEMAQVVAKAVKF
                     ATPVVVEAGTGTGKTFAYLVPALLSGKKTILSTGSKNLQDQLFNRDLPTIQKALKYKG
                     KIALLKGRANYLCLERLDQVTAMGVLGDKSVLTDLKKVSKWQNATKTGDLSECITIAE
                     DSPILPQLVSTTESCLGSDCPHFKDCYVVQARRKAMEADVVVVNHHLFCADMAVKKTG
                     FGELIPEAELVIFDEAHQLPDIASQYFGQSLSSRQLFDICKDTNIVYRTELKDLSQLG
                     KAADHLTKVVQDFRLLMGGEGQIRGNLRELFRDKKVVDGLVKVAENIDFLSEVAKKSL
                     GRSETLDKIFERLAEVKVQLKKLMDTSVTGYCYWYEANGRSFGLHITPLMVADKFGEQ
                     LKNQQIGWVFTSATLEVGGKFDHFCQRLGIENAEQLVLQSPFDYQHQSLLCVPRYLPD
                     TNKSNTLTALGQLLKPVIEANKGRCFLLCTSYYMMRGLADFLREHSSLNVLLQGETSK
                     SRLLEKFVKEDHSVLVATQSFWEGIDVRGDDLSLVIIDKLPFTSPDEPLLKARMEDCK
                     IQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDSRLVMRNYGQTFLKSLPP
                     SRRTRDLGNVIQFLKQK"
     gene            10160..10525
                     /locus_tag="PXF40_001758"
     CDS             10160..10525
                     /locus_tag="PXF40_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HDL5803080.1"
                     /translation="MLSTLLRMVASLALLFVMLYLGKLIVYLFPIGIPDSILGMLILF
                     GCLVIGIVKVEWVIPSAKPLTRYITLFFLPICVELIEHLELLRQNLNTFVLATALSTL
                     VSVVAIGVFAQWIFHYKRG"
     gene            10527..11213
                     /locus_tag="PXF40_001759"
     CDS             10527..11213
                     /locus_tag="PXF40_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HDL5803081.1"
                     /translation="MSYLYTVLTVIMFIAGLKISQKLKSSFLNPFLIALALLIGVLLI
                     FNIPYQDYYQGNSPLNNLLGVSVVALAYPFYEQLPHIRKKWRQIVVILLFSTIITMIT
                     GLGFSLLFGASQEILAAILPKSVSMPMAIIITNEINGNVAIAAVGVMIAGLVGSILGF
                     TLLRLAKVRNVMVIGLSMGAASHALGTARCLEHSMKAGSYSSIALVACGVLSSIFAPL
                     IFNVIVTLCY"
     gene            11297..13060
                     /gene="msbA"
                     /locus_tag="PXF40_001760"
     CDS             11297..13060
                     /gene="msbA"
                     /locus_tag="PXF40_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HDL5803082.1"
                     /translation="MQEQITQEKDLSTLKTFKRLWPTISPFKAGLITGAVALVLNALV
                     DSSLIYLLKPLLDEGFGQANNDFLKLMAVLVVVFILVRGITNYIASYCLAWVSGKVVM
                     TLRRHIFQHLMYMPVSYFDNNPTGRLLSRVTYDTEMVASSASHSLVTIVREGAYLLSL
                     FVVMIYTSWQLSIVLFVMAPIIGVLISFVSKYFRQLSRNIQSSMGELTVTTEQMLKGH
                     KVVLSFGGQEIEKARFDRVSNDMRRKGMKVVSADGISDGVVQLIASFALSAVLYVATF
                     PEVMSENLTAGSFTVVFSSMMAMLRPLKSLTNVNSQFQRGMAACQTLFEFLDLKTEKD
                     HGLISVAKAEGNVEFKKVSFSYEGKEEKALDNISFTIPKGKTVALVGRSGSGKSTIAN
                     LLTRFYDVTDGQILLDGINIQDYRLKNLREQCSVVSQQVHLFNDTIANNIAYAAIDKY
                     SREEIIAAAKAAHAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRNSPVLV
                     LDEATSALDTESERAIQSALEVLQKDRTVLVIAHRLSTIEKADEILVVDHGNIIERGS
                     HTELLAQGGAYKQLHSLQFGA"
     gene            13149..13781
                     /gene="lolB"
                     /locus_tag="PXF40_001761"
     CDS             13149..13781
                     /gene="lolB"
                     /locus_tag="PXF40_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HDL5803083.1"
                     /translation="MKKLTKLLSLSALLVLTACNSVLNASTEVQQPTVQIPHDDPQWQ
                     QHLAKLSQIQGYTATGQFGYISPEERFSSHFNWRYTNPIQFGLELSSNLSTKSLKLER
                     NKRGLTVSDNEGNSRSDRDVDALMQEIIGVSFPIDQFAYWVKGLPEKDGNYIVNEKRQ
                     LSQFSYPLNGTLWKASYVEYHEDRVPNLPKLIVLENGTQTLKIRIEKWAY"
     gene            13769..14623
                     /gene="ispE"
                     /locus_tag="PXF40_001762"
     CDS             13769..14623
                     /gene="ispE"
                     /locus_tag="PXF40_001762"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HDL5803084.1"
                     /translation="MGVLMKKVTLPSPAKLNLFLYITNKRADGYHELQTLFQFLDFGD
                     EIEIEITESSEVELINPVEGVATEENLIYRAAKLLQKTTACRQGCRIGIKKNLPMGGG
                     VGGGSSNAATVLVGLNHLWNTELSLEKLAELGLSLGADVPIFVRGMAAFAEGVGEVLT
                     PCDPQEKWYVVLKPEVSISTAAVFTDPNLPRNTPKRPLAELLSLPWENDCEKVVREKY
                     SAVEDLIQELLQYAQFRLTGTGACIFAEFETKAEAEQVFAHKPEAVFGFVAKGQNISP
                     LHQMLFQI"
     gene            14649..15599
                     /locus_tag="PXF40_001763"
     CDS             14649..15599
                     /locus_tag="PXF40_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HDL5803085.1"
                     /translation="MTDIKLFAGNATPELANRIAKHLYTSLGNATVGRFSDGEIQVQI
                     NENVRGGDIFIVQSTCAPTNDNLMELIVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVIADFLSSVGVDRVLTCDLHAEQIQGFFDVPVDNVFGSPVLIDDILKKS
                     DLVNPIVVSPDIGGVVRARAVAKLLNDTDMAIIDKRRPKANVSQVMHIIGDVADRDCI
                     LVDDMIDTGGTLVKAAEALKERGARRVFAYATHAVFSGTAAQNLANPALDEIVVTDTI
                     PLSNEIKALNKVRVLTLSGMLAEAIRRISNEESISAMFDA"
     gene            15677..16687
                     /gene="pyrD"
                     /locus_tag="PXF40_001764"
     CDS             15677..16687
                     /gene="pyrD"
                     /locus_tag="PXF40_001764"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HDL5803086.1"
                     /translation="MYSLIRKLLFALDTEKAHQFSIQALALAGKSPFSILPTPDNPTQ
                     VMGLTFKNPIGLAAGADKNGEAIDGFGKLGFGFIEVGTITPLAQDGNPKPRQFRIVDA
                     EGIINRNGFNNKGVDVLVENVKNATYSGILGINIGKNAVTPIEHSFDDYQICLRKVYQ
                     YADYVAVNISSPNTKNLRSLQYGEALDDLLRNLKNEQAQLSQKMGKYRPLVLKIAPDL
                     TDEEIVSVADSLIRYQIDGVIAGNTTLSRESIAGLPYSEQLGGLSGKPLHSLSTRLIS
                     KLSAELGERIPIIGCGGVHSLESGQEKVNAGASLLQVYSAMIYQGPSLIQTLAKHLQL
                     NS"
BASE COUNT         4861 a         3178 c         3868 g         4939 t
ORIGIN      
        1 cgccgcccat aaagcgtgtc ggttcgagtc cgaccactgg caccactcta atatcttttc
       61 ttatttacta ttaagaattt ctctattatc ttcctatatc aatttttctc aaaatattgt
      121 atttataaac ccgtatagat gggaacttta gccgtttatg tgagaaatgg ggcaataata
      181 aatctgtcaa taagttactt attaatcgaa tgaaaagtgg atttattaat tatattaatt
      241 aatagggaac acttattact tggaagtgtt ccctattatt ttgagtaagg taggggcgct
      301 ttatatgagt agctttttat ttcatcgaaa tgcggtgtat ggaacccatg agctacttaa
      361 gtcaatactt tgattagaac ggaatatcat catcaaaatt gttcattgcc ggctcaggct
      421 gtggtgccgg tttagattgc ggtgcagcac tttgggtttg gttgtaacca taattgctgt
      481 tgccttgatt gtagctatta cccgcaggag cagaatttcc ccaaccgcct tgctgaccgc
      541 ccatatcatt accttgacgg ctgccgagca tttgtagcac atcgccttga atttcggtgg
      601 tgtaacgatc ttgcccgttt tggtcttgcc atttacgggt ttttaaacgt ccttctacgt
      661 aaacttgaga gcctttacgt aaatattgcc cgcatacttc tgcttgacgg cggtagaata
      721 caatacgatg ccactcggtt acttcacggc gtgcaccggt gtttttatcc gtccagcttt
      781 ctgaggttgc cacactaata tttgcaaccg cttcgccatt tggcattgta cgcatttcag
      841 ggtcgttacc taaattaccg acaataatta ctttattgat accagccata aaatcctctg
      901 tttgataaat taaactaaaa tttgctaagt attctacctg aaaatccaaa agatgaacac
      961 caaaaaactg atattttgta cagttttatt aaaatatgcg ataatgatcg aaaattgaga
     1021 aaatagcact ggacattaaa aatatgcaac atatcgatat tcgtggagca agaacacaca
     1081 acttaaaaaa catcaattta accttgccga gagataaatt cattgtaatt accgggcttt
     1141 ccggctcggg caaatcgtct ctggcgtttg atacgctcta tgcggaagga caacgccgtt
     1201 atgtagaatc actgtctgca tacgcccgcc agtttctctc cttaatggaa aagcctgatg
     1261 tggatcatat tgaagggctt tcccctgcga tttcgattga gcaaaaatca acctctcaca
     1321 acccacgttc gaccgtagga acggtaacgg aaattcacga ctatttacgt ttattgtttg
     1381 ctcgagtggg cgagcctcgt tgccctgacc acgatgtgcc attggctgct caaactattt
     1441 cgcagatggt ggatcgagta ttggaagaac cggaaggaaa acggttgatg ctacttgccc
     1501 ctgtggtgaa agagcgtaaa ggcgaacacg taaaattatt ggaaaatttg accgctagtg
     1561 gctatttgcg ggctagaatt gacggtgaaa tttgcgattt atccgaccca ccggcattag
     1621 aattacagaa aaaacacacc attgaagtgg tggtggatcg ctttaaagta agggctgatc
     1681 tagccacccg tttggcggaa tcttttgaaa cagcgttaga tttatccggc tctaccgcaa
     1741 ttattgcaga tatggacgac ccaaatgccg aagaaattgt gttttcgtcc agctttgctt
     1801 gtccgcattg tggttactct ttacacgaat tagaaccacg ccttttctcg tttaacaacc
     1861 cggcaggtgc ttgcccgact tgtgatggtt tgggcgttga gcagtttttt gatgccaaaa
     1921 aagtagtgca aaatgaagag gtttcattag ccgccggtgc gatcaaaggc tgggatcgcc
     1981 gcagtttcta ctattttggc ttattaaaag ccgttgccga gcattatggc tttgatttag
     2041 aaaccccatt cgggcagcta ccgaaaaaat atcaaaacat tattttaaac ggcactaaag
     2101 aagagattga gtttgtttat gtcaatgacc gaggcgataa ggtcaaacgt aaacacgctt
     2161 ttgaaggggt gctgaataat atggctcgcc gctataaaga aaccgaatca aactcggtgc
     2221 gtgaagagtt ggcgaagtat attaataatc gtccttgtat ggattgcgaa ggctcacggt
     2281 tacgccgtga agcccgttat gtattcttag ataaaaccaa tttgccgatg gtttcggaaa
     2341 aaagtatcgg cgaggcatta accttttttg aagagctgaa attagccggt cagaaagaaa
     2401 aaattgctga gaaaatcctc aaagaaattc gtgaacggct acagttttta gtgaatgtcg
     2461 gcttgaatta tctttctctt tcccgctcgg cagaaaccct ttcaggtggc gaggctcagc
     2521 ggattcgcct tgccagccaa attggtgcgg gtttagtagg ggtaatgtat gtgctggatg
     2581 agccttccat cggcttgcac caacgagaca atgaacgcct actgaatact ttggtgcatt
     2641 tacgcaattt aggcaatacc gtgattgtgg ttgaacacga tgaagatgcg atccgagccg
     2701 cagatcatat cgtggatata ggcccgggtg ccggtgtaca cggtgggcaa gttatcgcac
     2761 aaggtacggc agctgaaatt atgcaaattg aggaatctat taccggacaa ttcctctcag
     2821 gcaagcaaaa aattgagatt ccggctcagc gtgtgcctta tgagccaact aaattgctca
     2881 ccttatcggg agcaagtggt aacaacttga aaaaagtgaa attagagatt ccggttggtt
     2941 tatttacttg tatcacgggt gtatcaggtt cgggcaaatc aactttagtt aatgacacac
     3001 tattccctct ggcacagaat gcgttaaacc gagcggaaaa cagcgatgtt gctccttatg
     3061 aatcgattga cggcttatcg cattttgaca aggtaattga tattgaccaa agcccgattg
     3121 ggagaactcc tcgctcaaat ccggcaactt acaccggatt atttacgcca attcgtgaga
     3181 tttttgccgg cacgcaagaa gctcgagcca gagggtataa cgtagggcgg tttagcttta
     3241 atgtgcgggg cggacgttgc gaagcctgtc aaggtgacgg cgtgattaaa gttgaaatgc
     3301 acttcttgcc tgatgtgtat gtgccttgcg atcactgtaa aggcaaacgc tataaccgtg
     3361 aaaccttgga aattcgctat aaaggcaaaa ctattcacca agtgttagag atgacggtgg
     3421 aagaggcgag agaatttttt gcccctatgc cgatgattgc ccgcaagttg caaaccttga
     3481 tggacgtggg gttatcttat atccgtttag ggcaatcttc tactacgctc tcaggcggtg
     3541 aagcccaacg ggtgaaattg gcgaccgagc tttccaaacg agacaccggc aaaacgctct
     3601 atattttaga tgaaccgacc accggcttgc attttgccga tattaaacag ttactcggcg
     3661 tgctacatcg cctgcgtgat caaggcaata cgattgtggt gatcgaacat aatttagatg
     3721 tgattaaaac cgcagactgg attgtcgatc ttggccctga aggtggcagt ggcggcggtg
     3781 aaattattgc taccggcaca ccggaagaag tggcaaaaga caaacgttct cacaccgcac
     3841 gcttcttaaa agagattttg gctaaaggct aacgttcaac acaagcggtc atattttcgg
     3901 aaaatgttgc aatttgcaaa aagttggaaa atatgaccgc ttgttttata tccggagtta
     3961 ttcctagtta gcctgtctga ttttgtcgaa ggcagattca agatcgctac tgaattgaat
     4021 ttgcgggatt tcgtttaccg ttttttgtga gcggactagc attctcatcg gctgaaattg
     4081 cacattacag agatgaagtt gttgatgtgg caacatatgc tgtacaaagc gggttagggc
     4141 gtgaatgcca ccagcatcta atactgtaac ggcatcgcat tgcagcacaa tatgtttaat
     4201 ttggtgatcg gtatgtacgg ttttattgtg cagatcggca aagagattat cggcggcagc
     4261 aaaaaataac ggaccgctga tccgataaac caacacatcg ttcaaatcgg ttgggtgagc
     4321 catttcaaag gatttagtca tttctgcaat agtacggata aatagcaggc ttgccagtaa
     4381 cacccctacc gtaatggcaa ttaccatatc aaataatacc gtgagggtaa tgcaagtcag
     4441 taaaaccgca atttcatttt tacctgaacg gcgggtaagt tgaatgattt gtggaatatc
     4501 tgccatattc caagctacta ccaataatag tgcagccatt gaggaaagag gcaaatagga
     4561 aagtgcttta gccaaaaaga gtagggcaaa taaaaccaac aaggcgtgaa ccacactaga
     4621 aatgggggaa actgccccgg aacgaacatt ggcagccgat ctcgcaatcg ctgctgtggc
     4681 ggtaattccc cctaaaaatg gcgaggcaat attacctaag ccttgggcta atagttcgtt
     4741 gttagagtgg tgcttggtat ctgtcatatt atcgcacact accgcacata ataacgattc
     4801 gatagcccca agcattgcca ttgaaaaggc agccggtaat aaggcttgaa tggtggttaa
     4861 gttccaatct atccgattcc cctctgcatt cgggagattc caaggtaaca caaattcagg
     4921 taatacgctt gggataccat acccagtggt gccgtcagag agcgtgtagt ggaatgctga
     4981 gccgatagtg gcaacgtttt gtccgaaatg aatcagcagt aatgataaca gcgtgccgat
     5041 aaagacggcg ggtaaatgcc cgggaatagg caaccgtagc ttgtgccaac gagttaaaac
     5101 caacaatgtt acgacaccca ctaaggtgtc agcccaattt atggttggca atgctgaaaa
     5161 aatagcctct agcttgccaa gatagtgttc aggcattttt tcaatgctta agcccagaaa
     5221 atctttgatt tgcaaggtgg cgatcacaat accgatgcca caggtaaaac ccagtgtgac
     5281 aggtagagga atgtattcaa ttaagcgtcc taatcggagt aacgccatca atactaaaat
     5341 tcctccggaa agcattgttg ccatgagtaa tccacttaag ccaaactgct gcgtgacggg
     5401 gtatagaatc accacaaaag cggctgttgg gcctgaaata ttaaatcttg aaccgcctgt
     5461 tagggcaatc acaatcccgg caacaatcgc cgtatataaa ccgtgctgtg gtggcacacc
     5521 gctggcaatc gccaacgcca tagataacgg aatagcaata acgccaacgg ttaagcctga
     5581 aataatatct ctgattaaat gttgtttacc ataacctgca ttgagagcat cttttaatgc
     5641 actaaaaggc ttgacggcaa gaaaagcatt tttagttaaa aaccatttat ttaacataga
     5701 atgttcgagt gaagagaatg tttcgcttat tttactgcaa tgaataaaat taaatttgag
     5761 ctaacgcaag aaaaagcagg aaagacgaaa tatgttggag acaagcggtt gttttaggcg
     5821 aaaaatttgc aaatacaaat aattagctga ttttattttg aaaatagcgt aaaatgccac
     5881 tttaatttgt actactatag tagtgcattt gtgtgatttc attaactata ataaacaaat
     5941 ggacagtctt attcattttt tgagtgcctt tttaactaat atcacttgga ttggggcgtt
     6001 agagctgggg ttaatttatt cccttgttgc ccttggggta ttaatttctt ataaaattct
     6061 ggattttccg gatctgaccg cagacggcag tttcccttta ggaggggcgg tgtgtgtgat
     6121 cagcattttg aatcaagttg atccttggct ggcaacttta tacggcacgc ttgccggagc
     6181 agtagccggt atggttactg caagtttgca tatcggcttt aaaatcgaaa aattgcttgc
     6241 cagtatttta atgatgatcg cactctattc gattaatcta cgcattatgg gaatgccgaa
     6301 tattgctatt ttaggcgaaa ccacgattta cgatgtaatg ccgattgaaa gcgatctaca
     6361 gttagcctta gtacgattag tgatggcatt gctggttgtt attatcgtaa aaggtttgtt
     6421 tgacctcttt tttgcgaccg aaatcggttt ggctgtgcgg gcaaccggta ctaatagtcg
     6481 aatggcgaaa gcacagggta ttgcgattaa taaaatgacg attttaggga tggcgatttc
     6541 taatgcgtta attgccttag gtggtgcttt gtatgtgcaa agcaacggtg gtgtagatat
     6601 ttcgattggg gtaggaacta tcgtgattgg cttggcggcg gtaattatcg gggaagcaat
     6661 tttttcggta aaacggatta tttggcttac ctttgcggtg attattggct caattcttta
     6721 tcgtttcttc atcgcactag cattaaataa cgaaacttta aacggcattg gctttggccc
     6781 gcaagatctg aatttaatta cggcgttatt ggtggtgatt gtattagcgg ttcctcgaat
     6841 taaacacaaa ttgctcggta agcgaggtta atatgattga actcaataac ttatttatta
     6901 ccttcaacaa agggacagca attgagaacc ctgtgctgag aggcttatcc ctaaaagttg
     6961 agcaaggcga atttgtgtcg gtaattggta gcaatggggc gggtaaatct accttattaa
     7021 atgcgatcag tggtgattgt gcggtggact ccggtgagat tttaattcaa ggaaataagg
     7081 taaaccaatc caccacttgg caacgggcaa atcaagtcgc ccgagttttc caagacccga
     7141 tggctggcac ttgtgaaagt ttaacgattg aagaaaatat ggcactggct taccaacgtg
     7201 gacgtaaacg tgggttgggc tttgcgatca aacgccaaat gcgagagtta ttcaaagaca
     7261 aacttgcttt gttagggcta ggtttggaaa atcggcttac tgatcaaatg gggcgtttat
     7321 caggcgggca acgccaagcg gtgagcttgc tgatggcatc acttcagccg tctaatatct
     7381 tattgttaga tgaacacacc gcggcactgg atccgaaaac caccgatttt gtgcttgaac
     7441 ttaccaataa aattgtaaga gaacagaaat taaccacgct aatggtaacg cattcaatgc
     7501 ggcaagccct tgactatggc gatagaaccg tgatgttaca ccaagggcaa gtggcgtttg
     7561 atgtttcggg cgagcaacgg caaaaaatgg acgtgccgga tctgttacaa cttttccaac
     7621 aaagtcgcca cgagcagttg agtgacgatg gattattact cggcaattaa ttttgcgatc
     7681 tgcatcgaaa aaatgaattt ctccttttgt ttttggctgt caaattttaa ataataagcc
     7741 caaaaggagg tattcaatgt taagcatttt caaaacaccg gtagagaaag aaacgctaga
     7801 cgattgggct aaaatttcgg ttgatgtagc gaaagttgcg attttggcaa ttcctgttat
     7861 actttttggc aaagaaccaa cgttgattaa attgactaac ttagcattat tggtattgag
     7921 tatttatgtt tttttgacgc ttgggcgaaa attacggcag ctaaaggagg tgttgtgatg
     7981 gaactaggct ggaatttaac cataggtttg ctaattttaa acgtctttgc gtttgcttgg
     8041 ctttatatta ttaaccggat ttctaaagaa caattatcca aaaatcaata atatttaatt
     8101 tttcacaagc ggttgttttt gcaaaatatt ttgtaaattc gaccgcttgc ctgtttttaa
     8161 atgacaaaat acgacgataa aattcagcat gcatttagcg aaaatgggtt gctcagccaa
     8221 aatatcagtg gatttcgacc acgccaagca cagcttgaaa tggctcaagt ggtcgcaaaa
     8281 gcagtaaaat ttgcgacacc tgttgtggta gaggcgggaa ccggcacagg caaaaccttt
     8341 gcttatcttg tgccggcact actttcaggc aagaaaacta ttctttcgac aggttctaaa
     8401 aacctgcaag atcaactttt taatcgagat cttcccacta ttcaaaaagc cctgaaatac
     8461 aaaggcaaaa ttgcgttact caaagggcgt gcgaactatt tgtgtttaga gcgtttagat
     8521 caagtgaccg caatgggcgt acttggggat aaatccgttc ttaccgattt aaaaaaagtc
     8581 agtaaatggc aaaatgccac taaaacaggg gatttaagtg aatgtattac cattgccgaa
     8641 gatagcccga ttctaccgca gttagttagc accaccgaga gttgcttagg ctcggactgc
     8701 ccgcatttta aagattgtta tgtggtacaa gcccgccgta aagcgatgga ggcagacgta
     8761 gtggtggtaa accatcacct attctgtgct gatatggcag taaaaaagac cggttttggt
     8821 gagttgatcc ctgaagctga gctggtgatc tttgatgaag ctcaccaact gccggatatt
     8881 gccagccaat attttgggca atcgctttct tcccgccagt tatttgatat ttgtaaggat
     8941 accaatattg tttaccgcac tgaactcaaa gatctgtctc aattaggcaa agcggctgat
     9001 cacttgacga aagtagtgca agatttccga ttattgatgg gcggagaagg gcagattcga
     9061 ggcaatttgc gagagttatt tcgtgataaa aaagtggtcg atggcttggt aaaagtggct
     9121 gaaaatattg attttttaag tgaagtggcg aaaaaatcgc tggggcggtc ggaaacgttg
     9181 gataaaattt tcgagcggtt agcagaagtt aaggttcaac ttaaaaaatt aatggatact
     9241 agtgtgacag gctattgtta ctggtatgag gcgaatggac gatcctttgg gctgcatatt
     9301 acgccgctta tggtggcaga taaatttggt gaacagttga agaaccagca aattggttgg
     9361 gtgtttacct cagccacact cgaagttggg ggcaaattcg atcatttttg tcaacggctg
     9421 ggcatcgaaa atgcggagca gttggtgtta caaagtccgt ttgattacca acatcaatct
     9481 ttactctgtg tgccccgcta cttgccggat accaataaat ccaatacttt aactgctctc
     9541 gggcaattat taaaaccggt gattgaggcg aataaagggc gttgtttctt gctttgtact
     9601 tcctattata tgatgcgagg tttagccgac tttttacgcg aacacagttc gctgaatgtg
     9661 ttattgcaag gcgaaaccag caaaagccgt ttattggaaa aatttgtgaa agaagatcac
     9721 agcgtgttgg tggcgaccca aagtttttgg gaggggattg atgtgcgagg cgatgattta
     9781 tcgttggtga ttattgataa attgccgttc acttcaccgg acgaaccatt actcaaagcc
     9841 cgaatggaag attgtaagat acagggcggt gatccgttta acgatattca aattcccgaa
     9901 gcggtgatta ccctcaaaca aggtgtaggg cgtttaattc gtgatgtgac cgatagaggt
     9961 gtagtgatta tttgtgattc ccgtttggtg atgcgaaatt atgggcaaac tttcttgaaa
    10021 agtttaccgc cgtctagacg cactagagat ttggggaatg ttattcaatt tttgaaacaa
    10081 aaatagggtt acaagcggtc agatttctgc agatttttgc aaaaaaacgg ataaaaataa
    10141 ccgcttgttg aggagttata tgttgtctac attgctgcgt atggttgctt ctttggcatt
    10201 gttatttgtg atgctttatt taggcaagtt aatcgtttat ctattcccca tcgggatccc
    10261 ggatagtatt ttaggtatgc ttatcttatt cggctgcttg gttatcggca ttgttaaagt
    10321 ggaatgggtg ataccgagcg cgaaaccgct cacacgttat ataacactat ttttccttcc
    10381 gatttgtgtc gaactcatcg aacatcttga gctgttacgc caaaatctga acacttttgt
    10441 attagcaacg gcattaagca ccttagtttc tgtggtcgcg attggcgtgt ttgcacagtg
    10501 gatttttcat tacaagagag ggtaaaatga gctatcttta cactgtgttg acggtaatca
    10561 tgtttattgc cggtttgaaa atcagccaaa aactcaagag cagttttctg aaccctttct
    10621 taattgcact cgctttgcta attggtgtat tactgatttt taatatccct taccaagact
    10681 attatcaagg taattccccc ttgaataact tacttggcgt ttctgttgtg gcacttgctt
    10741 acccttttta tgaacaatta ccccatatcc gtaaaaaatg gcgacagatt gtcgtgattt
    10801 tgctgtttag taccatcatt acgatgataa ccgggcttgg gttttcatta ttatttgggg
    10861 caagccaaga gatcttagcc gccattttgc ctaaatcggt atcaatgcca atggcaatta
    10921 ttattacgaa tgaaattaat ggaaatgttg caatcgcagc ggttggggtg atgatcgcag
    10981 gcttagtggg atctatttta ggctttacgc ttctgcgcct ggcaaaagta agaaatgtga
    11041 tggtgattgg gttaagtatg ggagctgctt cccacgcatt aggcacggca agatgcttag
    11101 agcatagtat gaaagccggt agctatagtt ctatcgcatt agtggcttgt ggtgtgctgt
    11161 cttctatatt tgcaccttta atatttaacg ttatcgtcac gttatgttac taaaaacagt
    11221 gaaatctcaa accttatttg gtaactggct gaaatcaagg tacaataccg tgatttttca
    11281 atgaaaatag agaattatgc aagaacaaat aacacaagaa aaagatcttt ctacgcttaa
    11341 aacctttaag cgtttatggc cgactatcag cccgtttaaa gcgggtctga ttacaggtgc
    11401 tgtcgcttta gtattaaatg cgttagtgga ttctagtctt atctatctcc tcaaaccctt
    11461 gctagatgaa ggctttgggc aagctaataa tgattttctg aaattgatgg cggtgcttgt
    11521 agtagttttt attttagtgc gcggtattac caattatatt gccagttact gtttagcttg
    11581 ggtgtcaggc aaggtggtaa tgacattacg ccgccatatt tttcaacatt taatgtatat
    11641 gccggtaagc tattttgata acaacccgac cgggcgtttg ctctcacgag tgacttacga
    11701 taccgaaatg gtggcgagtt ctgcttctca ttctttagtg actattgtgc gtgaaggggc
    11761 ttatctgctg tcattgtttg tggtgatgat ctataccagt tggcagcttt ctattgtgtt
    11821 atttgtgatg gctcctatca ttggggtact gatcagtttc gtttcaaaat attttcgtca
    11881 attaagtcgc aatatccaaa gttcaatggg ggagcttact gtcacgacag aacaaatgct
    11941 taaagggcat aaggttgtac tttcctttgg tgggcaggaa attgagaaag cacgttttga
    12001 tcgagtcagt aatgatatgc gtcgtaaagg gatgaaagtc gtttctgctg atggcatttc
    12061 tgatggtgtg gtacagctta tcgcctcttt tgcgttatct gctgtgcttt atgttgcgac
    12121 cttccccgag gtgatgagtg agaatttaac cgcaggttca ttcacagtag tgttttcttc
    12181 gatgatggca atgttacgtc ctctaaaatc actcaccaat gtgaactcgc aattccaacg
    12241 tggaatggca gcctgccaaa cgttatttga atttttagat ttaaaaactg aaaaagatca
    12301 cggcttaatc tccgttgcta aagctgaagg caatgtggaa tttaaaaagg taagctttag
    12361 ttatgaaggt aaagaggaaa aagcactcga taatatttct ttcaccattc ctaaaggcaa
    12421 aacagtagca ttggttgggc gttccggctc gggtaaatca actattgcca atttgcttac
    12481 ccgtttttat gatgtgactg acggtcaaat tttgcttgat ggaattaata ttcaagatta
    12541 ccgcttaaaa aacttaagag aacaatgctc ggtggtttct caacaagttc atttgtttaa
    12601 cgatactatt gctaataata ttgcttatgc tgcaatcgac aaatacagcc gagaagaaat
    12661 tattgctgct gcaaaagctg cacacgcaat ggaatttatc gaaaaattgg aaaatggctt
    12721 agacactgta attggtgaaa atggcgcaag tctttccggt gggcaacgcc aacgcttggc
    12781 aatcgctcgt gcattactgc gaaattctcc tgtgcttgtg ctggatgaag ctacctctgc
    12841 attagatacg gagtcagaaa gagcgatcca atctgcactt gaagtgctac agaaagatcg
    12901 tacggtgttg gtcatagcac accggttatc aacgattgaa aaagccgatg aaattttggt
    12961 agtcgatcac ggaaatatta ttgagcgtgg cagccatacg gaattgttag cacaaggtgg
    13021 ggcttataaa caactccata gtttacaatt cggagcctaa tttgtagggg agaaatatgt
    13081 ttctccccaa ttaatgataa aaacagggcg aaaaatattt cgtccctaca ataatttatt
    13141 tggatactat gaaaaaactg acaaaacttt tatctcttag tgctttactg gtcttaaccg
    13201 cctgtaattc ggtactaaat gcctcaacag aggtgcaaca accaacagta caaattccgc
    13261 atgacgatcc acaatggcag cagcatttag cgaaactgag ccaaattcaa ggctatactg
    13321 caacggggca atttggctat atttcgcctg aagagcgttt ttcttcccat ttcaactggc
    13381 gttatactaa tccaatccaa tttgggttag agctttcctc gaatctctcg actaaatcac
    13441 tgaaattaga gcgtaataaa cgaggcttaa cggtttcgga caatgagggt aatagccgtt
    13501 ctgaccgtga tgttgatgcg ttaatgcaag agattatcgg tgtttcgttt cctatcgatc
    13561 agtttgccta ttgggtaaaa ggcttgcctg aaaaagatgg caactatatt gtgaatgaaa
    13621 aacgccagct gtcgcaattt agttatccgc ttaatggcac gctttggaaa gcaagctatg
    13681 tggagtatca cgaagatcgt gtaccaaact taccgaagct gattgtgctt gaaaacggca
    13741 ctcaaacgtt gaagatccgc attgaaaaat gggcgtatta atgaagaaag tcaccttacc
    13801 cagcccggca aaattaaacc tgtttttata cattaccaat aagcgggcag acggttatca
    13861 cgagctacaa acgctgtttc agtttttaga ttttggtgat gaaattgaga ttgagatcac
    13921 agaaagttca gaggttgaat taattaatcc ggtagaaggg gtggcaactg aggagaatct
    13981 catttaccga gcagcaaaac ttttgcaaaa aacgaccgct tgtaggcaag gctgccgtat
    14041 tgggattaaa aaaaacctac cgatgggcgg aggtgttggt ggtggatctt ctaatgctgc
    14101 aacagtatta gtcggtttaa atcacttgtg gaataccgag ctttcattgg aaaaattggc
    14161 agaattaggc ttaagtttag gggctgatgt gccgatattt gttagaggta tggctgcttt
    14221 tgccgaaggc gtgggggagg tgttaactcc ttgtgatcca caagaaaaat ggtatgtagt
    14281 gctaaaacca gaagtgtcga tttcaaccgc agcggtgttt accgacccga atttacctag
    14341 aaatacgcca aaacgcccct tagccgaatt attatcttta ccgtgggaaa acgattgcga
    14401 aaaagttgta cgagaaaagt attctgcggt tgaagatctt atacaagaat tgttacaata
    14461 tgctcagttt aggctaacag gcacaggtgc ttgtattttc gccgaatttg aaacaaaagc
    14521 agaagccgag caggtttttg cacataaacc ggaagccgtc ttcggttttg tggcgaaagg
    14581 gcaaaatatt tcgccattac atcaaatgtt attccaaatc taaccatctt aaccttaagg
    14641 atcaatccat gacagatatt aaactgtttg cgggcaacgc aactccggaa cttgctaatc
    14701 gtattgcaaa acatctttat acctcattag gtaatgcaac agttggtcgt tttagcgatg
    14761 gtgaaattca agtacaaatc aatgaaaatg tgcgtggagg cgatattttt attgtgcaat
    14821 ccacttgtgc accaactaat gataatttaa tggaattgat cgtgatggta gatgcgcttc
    14881 gccgtgcatc agctggtcgt attaccgcag tgattccgta tttcggttat gcacgccaag
    14941 acagacgcgt gcgttcggcc cgtgtgccaa ttaccgcaaa agtgattgct gatttcttat
    15001 ccagcgtagg ggtagataga gtcttaacct gcgacttaca cgcagagcaa attcaaggtt
    15061 tctttgatgt gccggtagat aacgtatttg gttcccctgt gttaatcgat gatattttga
    15121 aaaaatccga tttggtcaac cctatcgtgg tttctccaga tattggtggg gttgttcgtg
    15181 caagagcggt ggcaaaatta ttaaatgata ccgatatggc aattattgat aaacgtcgtc
    15241 caaaagcgaa tgtatcacag gtaatgcaca ttatcggtga tgtggctgat cgtgactgta
    15301 ttttagttga tgatatgatc gatactggtg gtactttagt caaagcggct gaagcgctga
    15361 aagaacgtgg cgcccgtcgt gtctttgctt atgccacaca cgcggtattt tcaggcacag
    15421 cagctcaaaa tttagcgaat cctgctttag atgaaattgt agtaactgat actattccac
    15481 tgagtaatga gattaaagca ttaaataaag tacgtgtttt aacattatcc ggtatgttag
    15541 cagaagcaat tcgccgtatt agcaatgaag aatccatttc agcaatgttt gatgcctaat
    15601 ttatgagaaa aaacccagtc gaaagattgg gtttttcata tctgttcact actatattta
    15661 gtttaagata atttgtatgt attccctgat tcgtaaatta ctttttgcac tagatacgga
    15721 aaaagcacat caattctcta ttcaggcact tgctttagcc ggaaaatcgc ctttttcgat
    15781 tctgccaaca cccgataatc cgacccaagt aatgggactc acgtttaaaa atccaatagg
    15841 gcttgcagcc ggagcggata aaaacggtga agcgatagat ggttttggga aattaggatt
    15901 tgggtttatt gaggttggga ctattactcc tctcgctcaa gacggaaacc ctaaaccgag
    15961 gcaatttcgt attgtagatg cagagggaat tattaaccgc aatggattta ataataaagg
    16021 cgttgatgtt ttagtagaaa atgtaaaaaa tgcaacctat agtggtattt taggtattaa
    16081 tattggaaaa aatgcggtta caccaattga gcatagcttt gatgactacc aaatttgttt
    16141 gcgtaaggtt taccaatatg ctgattatgt ggcggtgaat atttcatcac ccaataccaa
    16201 aaatttgcgc agtttacaat atggtgaggc attagatgat ttgctgcgaa acctcaaaaa
    16261 tgagcaggca caactttcgc aaaaaatggg gaaatatcga ccgcttgttt taaagattgc
    16321 gcctgattta accgatgaag aaatcgtttc tgtagccgat agtcttattc gttaccaaat
    16381 tgatggggtg attgccggca atactacctt gtctcgtgaa agtattgccg gattaccgta
    16441 ttcggaacaa ctgggtggat taagtggcaa gccattacac tcattaagta caaggttaat
    16501 ttcaaaatta tctgccgagt tgggcgagag aataccaatt ataggttgtg ggggagtcca
    16561 ttcgttagag agtgggcagg agaaagtgaa tgcaggtgct agtttattgc aagtctattc
    16621 cgcaatgatt taccaaggac catcattaat tcaaacctta gccaaacacc ttcagctgaa
    16681 cagttaggga tagatttcta gttaaaaatg attggttagg tttatttctg tcatcttagt
    16741 ggaatagatg gcggtattag ctatctatca aaaatagaca aaattgccta tttttgctat
    16801 cttgcactgc aaatttatct acaaaattta aacaaatttt ataaaa
//
LOCUS       DANMCL010000061        16760 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.061, whole genome shotgun sequence.
ACCESSION   DANMCL010000061 DANMCL010000000
VERSION     DANMCL010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16760
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.061"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..135
                     /locus_tag="PXF40_001765"
     CDS             <1..135
                     /locus_tag="PXF40_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S ribosomal RNA methyltransferase Erm"
                     /protein_id="HDL5803087.1"
                     /translation="FKLYNSNMVSKDKKVLVNNSYKRMLEHESSLEKIHRNRKQNNRK
                     "
     gene            complement(250..1221)
                     /locus_tag="PXF40_001766"
     CDS             complement(250..1221)
                     /locus_tag="PXF40_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002337518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS30-like element ISApl1 family transposase"
                     /protein_id="HDL5803088.1"
                     /translation="MSTSYRHLTINEREKIMILLAQGKKQAEIAKALGRSSSTISREL
                     KRHALESYSATNAQNSYLKHRQNSKAQRKLEQPEYFNLVQEKFLTENWSPEQISARLK
                     LEKSELSISYSTIYRGIYSGLFDIGERKASRKLRHKGKTRHTKNHHEKRGKIQISNHL
                     NDRPISAQNRSRFGHWKADTVLGKAGGACLLTLTERKSRFELVKKIPAKKAEAVQKAM
                     IELLDSHILRSITPDRGKEFAQHRLVTEALGVEFYFPEPHQPWTRGTNENTNGLLREY
                     FPKHQDINQWSEVDIQQVVNKLNLRPRKCLGWKTPYEVYFKKTLHLV"
     gene            complement(1402..2166)
                     /locus_tag="PXF40_001767"
     CDS             complement(1402..2166)
                     /locus_tag="PXF40_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5803089.1"
                     /translation="MLIEWRNQIVGDKIKAVTWNNYVRHLKSLYNFGLSQGVLNINQN
                     PFNQLFIRESKRRKKTYSTEQLHKIDHILNNNILLPDFLKPSWFILAIIMTLRCTGIR
                     RGQLVKLKIGDVNLSNRTIYISPEINKNHDYHIVPISDSLYLHIERLITELKIRKQTD
                     NCQLFNLNLFSRCSRRRGQPMSQNQLTHIFRHISDLVGFTSSPHRFRHTVATQLMKKP
                     ENVYVVQKLLGHKDISVTLGYIEHDVEMLRETVNLL"
     gene            complement(2322..4301)
                     /locus_tag="PXF40_001768"
     CDS             complement(2322..4301)
                     /locus_tag="PXF40_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5803090.1"
                     /translation="MQSIFKKIFGKHTSQSAVKSDTVFSIEQDDDGWLYPQNATQLLN
                     TELRQKYLGLLWQQVSMNRQMFETFYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKARQSYILPPNVAPEEQSKQRDAWTAAAIYLALVHDIGKVVVDIEITLKD
                     GSRWFAWNGEPPEPYKFKYIKGRDYHLHLVIGSFFANQIIPKSAFDWLAQYPEVISSL
                     MYAMSGHNDKAGLLSEIVQKADQYSVTLALGGDVNKLVQRPVNSLSKQLVLALRYLLE
                     QKIKLNTPKGPADGWFTEEGLWLVSKTAADNIRTYLLGQGISVPKDNPKLFDEMQSLG
                     IVEESPSGGAIWSCRIQADSGWTPANVFTLLRIKPEVAWENINDRPNYFSGKVKIVEQ
                     IMEDSNMENHPPLVDESTKLVTLENVQPETIITSKEVEISQVEASSDNAPFSEIIIND
                     ENDLTSFVLDMFAPTESSEPSLADISIGKGQEIATMPSKQEVQDKPTTKKLNVTQSAV
                     ETPETLTLSELQSQNKENSITGDNFVNWLKSGIATNKFAINKPTAKLHIVEDHLFLVT
                     PVIFEMYLQESGLPYDKEMINSLQYDFQGLGIHLPKNTTINGKPDTINFWKCDVIGPR
                     KTSSLTGYLIKNTHLFFGDKTLLNNHCLTLQKEET"
     gene            complement(4729..5526)
                     /locus_tag="PXF40_001769"
     CDS             complement(4729..5526)
                     /locus_tag="PXF40_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HDL5803091.1"
                     /translation="MENFEKQFISLFQRIVPHYRRSEVFYDFITLSALDMYLVTYRDQ
                     AEPNLRERFAHAKARYSDSEFTQLAELLAVTVNALTQKRYDFLGSVFMNLNLGDGYRG
                     QYFTPSHIADLMAKVTLQDCDRIISQQGFVTLSEPTCGSGVMVIGCVNAMFDAKYNPQ
                     QQLWVHCQDVDFTAAMMCYIQLSLLHIPACIVVGDTLLNETKIQMYTLAHLMGNWSHK
                     LEQQIAPLVNSTTEKGCGNNIEKSVIVEDLSQISILDEIDDNELIFY"
     gene            complement(5599..6345)
                     /locus_tag="PXF40_001770"
     CDS             complement(5599..6345)
                     /locus_tag="PXF40_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803092.1"
                     /translation="MPNWCENKLQIFCDCIQAKQIIPKLFRKTESDKWCLDFELLVPM
                     PESICIESSSLGDRAMEFLKISPNRRLTRPLLKKYIYGSEIDRIYAKAKHHRWDVGHF
                     INWLIKRPEQQSILWLNLALGQQYLSNLAQHGYKDWYDWSNEQWGCKWNVCSDSCQVS
                     FNDNGSINCLFDTPWGPPDGWFQALCTAFPDIEFILSFFEPGMWFAGKYIANLDGSYC
                     NIYIDDRGIRSFAEEVFNEEFEDEFEEKLE"
     gene            complement(6485..7459)
                     /locus_tag="PXF40_001771"
     CDS             complement(6485..7459)
                     /locus_tag="PXF40_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5803093.1"
                     /translation="MNTQTKFDLYQHITDRIVAALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEYGYKQSKWITAKKANELGGYIRKGEKATVVMNYRPDK
                     REKLDEEGNIVYDEEGNPEIEQHFFIKKHNLFNLDQCENLPEELYDPISEPKQPTSDP
                     NQYEIFADIRQIIKGMDLHVEMKPSNRAYYQPSADLVVMPEIKQFENAQAFHSVLLHE
                     MTHATGAAKRLDREGITSGKAKFGNKVYAFEELVAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVIKEDKRAIVRASGKAREACQYMLDALNISQLADKNEVFEEAA"
     gene            complement(7704..8111)
                     /locus_tag="PXF40_001772"
     CDS             complement(7704..8111)
                     /locus_tag="PXF40_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5803094.1"
                     /translation="MKHDLDLLKYIWDNRNLNNKAYQYLFHICIEPMRKGDWNRYTIW
                     LNNNGNLVNISAVVYEIVSSQQLKDDIKLWQDMQFHCRPVKVETTGFISFLLHQFFNG
                     ITHVLLEQGMITETEAAEKSYHFIAANSFQRLL"
     gene            complement(8227..9069)
                     /locus_tag="PXF40_001773"
     CDS             complement(8227..9069)
                     /locus_tag="PXF40_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803095.1"
                     /translation="MSGSVLNTYFKHALVKAGFPNCLNIEYSLSHCQGDGVAFYGRLN
                     TETLINLFNKLNPQKRTQKMFSNLLNHIESWEPHYGVDFEIIRNSFGYRYSHCNTMEL
                     SVRTADDLAFFYDRDARKEWYFPTSKVEKYKALWDGFIQDLGQYIKDTSCALESNGYQ
                     IIEASPYQTETIFKFNTENYLIELKRKSSEFYSESVDWLCGDVCDFEAMIEEILQGKL
                     CYADFVATVTDKESGIQLGSDEITGVSYSPTDHSLSGYRQELISNAIASARSNAARFA
                     YLHA"
     gene            complement(9147..9542)
                     /locus_tag="PXF40_001774"
     CDS             complement(9147..9542)
                     /locus_tag="PXF40_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803096.1"
                     /translation="MARKKIQYTETDLHLYSVLWNLRHAHDLFSVKLERETKFGKAFS
                     VFSRFDVCPSYGEVDITYLVVKAGIRKTLRGFAYVGGNGFSHSRHLMSTFMYLVREIL
                     VEHNWISETELYDQPISVYKFRAINFDKW"
     gene            complement(9641..9886)
                     /locus_tag="PXF40_001775"
     CDS             complement(9641..9886)
                     /locus_tag="PXF40_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5803097.1"
                     /translation="MLVHIRLSCIGDVLPTKLNEWTSEHQALQQEISHRALEAWQNRD
                     KDIKSVRFMQQMPSRQGLNFRFLSVSEQNGKLIVSRA"
     gene            complement(9958..10311)
                     /locus_tag="PXF40_001776"
     CDS             complement(9958..10311)
                     /locus_tag="PXF40_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803098.1"
                     /translation="MSQQTAGWDVIPFESSKTVKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFWTLLAAIIAF
                     VCGMAAVFGTQLSLI"
     gene            10685..11128
                     /locus_tag="PXF40_001777"
     CDS             10685..11128
                     /locus_tag="PXF40_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL5803099.1"
                     /translation="MKVSRFLGYCSIVTGVFSPLAQAQPNIIVYTTKMYPIQNSQLAS
                     QIYYLDQVENFEESISRNLSKSPEIAEQEMRAFFNSADWKAQEQQLKDAYQGVISGWQ
                     NGIKKVPAVFFDNPQSSPSVIYGTTDVQKALDEWHKWVKQQGESK"
     gene            11125..12066
                     /locus_tag="PXF40_001778"
     CDS             11125..12066
                     /locus_tag="PXF40_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL5803100.1"
                     /translation="MKKTFLTILISASLAVPTTLYPQPARASLNTASIAASSASTSCL
                     EYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNHDGQTPWTELQALNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGNTGYYCKTQTTPFMPYFLSGLDFFA
                     WRENMPEMFYPEALTPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     SRTAQPHIYFPAAKTGGAGEWPPGPVEEGQARTHKWQILYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            12084..14096
                     /locus_tag="PXF40_001779"
     CDS             12084..14096
                     /locus_tag="PXF40_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5803101.1"
                     /translation="MKSHFNFKKSHLRITTALLSSVSGLSYADSITDKLEFSKSDSII
                     SDRVFYQIGGGMGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMVLQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSSQPDAKQAQKDLEDKKGKDGRVWIGGQKKGGENQ
                     EAINVVGDVVKAGFNLLNKRNALDTSTISGSSCDGNLCQTWDNPQTAADFLTKIIGEQ
                     SISTCKEDCGTKTSSKAGVGLSPEIEEEHVRTIVKLENVLNMDVPKAELLADLSSTTV
                     PVTRGLIESLRDDPDVEVLSQRLSAEIATSKIMEKMLLARRAVLAGMREPNVAQNADA
                     QVELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLD
                     KRVQGLENGNVALTDLEAGSNINLSRRNIALSIPNIPNVAALIPNLPNRGGSGVGGNF
                     PSLAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTIVKVTKDT
                     VITKEDAERDLARRTAIFANNVRKELGDSNWNALPPNAQAVLVSYAYNYGSLAKTKSV
                     LDAARRSAQSGDMNALATAIRNRQVDNNGINARRRNQEADYILGKN"
     gene            14117..14545
                     /locus_tag="PXF40_001780"
     CDS             14117..14545
                     /locus_tag="PXF40_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803102.1"
                     /translation="MRKLLGITVLTLCTTSAFATDKNVVFSCTSTEGKPLTVKRVGND
                     YEYSYDKTIFKNPIKKAVTNDGSIIARGSGFTTYALELKNDGLKYVVGFVQPNGNSKE
                     FIEPGATISRDNDQPSIGSVDCDPYKKIYYKFDVHLMNTL"
     gene            14761..15231
                     /locus_tag="PXF40_001781"
     CDS             14761..15231
                     /locus_tag="PXF40_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803103.1"
                     /translation="MDITTQNIELRYLSEQFYLDVAPHLKEILLKETRPYCVLLVRVK
                     NLDFALPLRSNLPEREGVGIKTIPNPQEYGKFKGIDFSKAILLTDKSYLKTDTVQLKN
                     KSELLNIQGNERRIVREFKKYVSEYITAHKNGYKLDHKFEYTTLINYHTELKIS"
     gene            15252..15593
                     /locus_tag="PXF40_001782"
     CDS             15252..15593
                     /locus_tag="PXF40_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803104.1"
                     /translation="MKFIDFGKQLANPVKFIKQNTAFLPKPIQQVVVFAVIFAGLPLF
                     ILGFFILRIWAYKHISLYSEYKDMANSEISSKDTDLKSLFSDDEEQEDDEYQYGYDGP
                     GIYLGNYRVDE"
     gene            complement(15639..>16760)
                     /locus_tag="PXF40_001783"
     CDS             complement(15639..>16760)
                     /locus_tag="PXF40_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5803105.1"
                     /translation="QMNSELGDQQARVPIWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQNSQLSLSPAQVRETSWLGGRILIA
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANNGLKDRLLDDVK
                     QNFSAKVIDFFSSKENSDESILRTVLRAENMDISRGKVYPGYGGNLDRSFTNEVTKTA
                     SMFGLSLGSIGAFPAFDSMRQALPMVHSFALMALIILTPLIMVMSGYSLKTLVTLTFV
                     NFALVTLTFWWELARWLDSWLLSVLYDSGTHSRINPYFLENTQDDIIVNFVMGSMFLV
                     LPAIWLGSMSWVGVKMGEFASHLTTGSRDSKTAGSKIGK"
BASE COUNT         5195 a         3214 c         3173 g         5178 t
ORIGIN      
        1 tttaaactct ataattcgaa catggtaagc aaggataaaa aagttttagt taacaattcg
       61 tataaaagaa tgttagaaca tgagtctagt ttagaaaaga ttcatagaaa tagaaagcaa
      121 aataacagaa aatagataaa cggcagataa ggaaaagcta aatgttaaaa ttaaagctag
      181 aaaacataaa caaaactttc gatgggaaaa actttgttgt taaaaatttt aatttggaag
      241 cttgaattgt caaaccaagt gcaacgtttt tttgaagtaa acttcataag gtgttttcca
      301 acccaaacat ttacgcggtc gtaaattcag tttattgacc acctgttgaa tatcaacttc
      361 gctccactga ttgatgtctt ggtgcttcgg aaagtattca cgaagtaacc catttgtatt
      421 ttcattcgtt ccccgtgtcc acggttgatg cggctcgggg aagtaaaatt ctacacccag
      481 tgcttctgtt accaaacgat gttgggcaaa ttctttacca cggtctggcg taattgaccg
      541 caatatatgt gaatccagca attcaatcat ggctttttgg actgcttcgg cttttttggc
      601 aggaattttc ttcaccaact caaaacgact tttgcgttcc gtcagcgtca gcaaacaagc
      661 tccacccgct ttacccagta cggtatcggc tttccaatgt ccaaagcgac tgcgattttg
      721 cgccgaaatg ggacggtcgt tcaaatggtt ggatatctga attttgccac gtttttcatg
      781 atgatttttt gtatgccgtg ttttgccttt gtggcgcagt ttgcgactgg ctttgcgttc
      841 gcctatatca aacaaccctg aataaatacc acgataaatg gttgaataac taatggataa
      901 ttcagatttt tccaatttta atcgtgcgct gatttgttcg ggcgaccagt tttctgtcag
      961 aaacttttct tgcaccaaat tgaaatattc aggctgctct aatttgcgct gtgctttgct
     1021 attttgacga tgcttcaaat agctgttttg tgcgttcgtt gcactgtagc tttctagagc
     1081 gtgtcgtttc agctcgcgag aaatggtgct ggagctacgt cccagtgctt tggcaatttc
     1141 tgcttgtttt ttgccctgtg cgagtaaaat cattatcttt tctcgctcgt ttattgtaag
     1201 atgtcggtag gaagtactca tcatttggaa gtggtttttg tgtggaaaca aaattatatt
     1261 ctagttgatg agtacttctt tttttgttgc acttggattg taaattcagc gtataaaatc
     1321 agttcattta gaagataaaa cagaaattat ttatttatag aaaaaaagtg ggagaaatta
     1381 tattctccca tttttctttt atcagagtaa attcactgtc tctctcaaca tttccacatc
     1441 gtgctcaata taacctagtg ttacgctgat atccttatgc cctagaagtt tctgaaccac
     1501 ataaacattt tcgggcttct tcattaattg agttgcaacc gtatgtcgaa atctatgtgg
     1561 tgatgaagta aaaccgacca agtcagaaat atgccgaaat atatgcgtaa gctgattttg
     1621 gctcattggc tgtcctcttc ttcgagagca tcgagaaaat aaattgagat tgaacaattg
     1681 gcaattatct gtttgttttc tgatttttaa ctctgtaata agcctttcta tatgaagata
     1741 aagtgaatct gaaatcggta cgatatggta atcatgattt ttattgattt ctggcgaaat
     1801 ataaatcgtc ctgttggaaa gatttacatc accaattttc agtttcacta attgtcctcg
     1861 ccgaatgcct gtacatctca atgtcataat aatcgcaaga ataaaccaac ttggttttag
     1921 aaaatcaggt aatagaatgt tattattgag tatgtggtct attttatgta attgttcggt
     1981 tgaataagtt ttctttcttc tttttgattc acgaataaat aactgattaa atggattttg
     2041 atttatattg agtacccctt gcgatagacc aaagttatat aacgatttta aatgtctgac
     2101 ataattattc catgttacag ctttgatttt atcgccaaca atttgattac gccattcaat
     2161 tagcatatca gtggtaatct catttgcatt taactttggg taacgtcttt tgataattcg
     2221 gattacatta ttatagctcc gcttagtatc agggcgaaga tagtaacgat agaaaaaaaa
     2281 atcggtctag tagcgaatca aaagagatag atgtcgtcat tttaagtttc ctctttctgt
     2341 aaagttaaac agtgattatt taatagtgtc ttatccccaa agaagagatg tgtatttttt
     2401 atcaaatatc cagttaaaga ggaagtcttt ctcggaccaa ttacatcaca tttccaaaaa
     2461 ttgatggtat ctggcttacc gtttattgtc gtattcttag gtaaatggat tcctagccct
     2521 tggaaatcat actgaagact atttatcatt tccttatcat aaggcagacc actctcctgc
     2581 aaatacattt caaaaataac gggggtaact aaaaacaggt ggtcttcaac aatatggagc
     2641 ttggcagtag gcttgttaat tgcaaatttg ttggtcgcaa tacctgattt gagccaattt
     2701 acaaagttat ctcctgtaat tgagttctcc ttattctgtg actgtagctc tgatagtgtt
     2761 aatgtttcgg gcgtttctac tgcactttgt gttacgttga gctttttagt ggtaggttta
     2821 tcctgtactt cttgtttgga tggcatcgtt gcaatttcct gtcccttacc aattgaaata
     2881 tcagcaaggc ttggctcaga gctttccgta ggtgcaaaca tatccagcac aaaagaggtt
     2941 aaatcatttt catcatttat gatgatttct gagaacggtg cattatctga gcttgcctct
     3001 acctgagata tttcaacttc cttagaggta ataatagtct ctggttgaac attctctaat
     3061 gtaacaagtt tagtgctttc atcaactaat ggaggatgat tttccatatt gctatcttcc
     3121 attatctgct cgactatttt aactttcccg gaaaaataat ttgggcgatc attaatattc
     3181 tcccaagcca cttcaggttt aattctcaat aatgtaaaga cgtttgccgg tgtccaacct
     3241 gaatcagctt gaatacggca actccaaatc gccccaccag aaggagattc ttctacgata
     3301 ccgagagatt gcatttcatc aaataacttt ggattatcct taggcacgga aatcccctgc
     3361 cctagtaagt aagttcgtat attatcagcg gcagttttgc taacaagcca caatccttcc
     3421 tcggtaaacc aaccgtctgc agggcctttc ggagtattta acttgatttt ctgttccagt
     3481 aaataacgta gtgccaagac aagctgcttt gacagagaat tgacaggacg ttgaaccagt
     3541 ttatttacat cgccaccgag tgcgagggta acactatact gatcagcttt ttgcacgatt
     3601 tcagataaaa gcccagcttt atcattatgt ccggacattg catacatcag agaagaaatg
     3661 acttctggat actgtgccag ccaatcaaat gcagatttgg gaataatctg atttgcaaag
     3721 aagctgccta tcacaagatg aagatggtag tctcgacctt tgatgtattt gaatttatac
     3781 ggttcaggag gttctccatt ccaagcaaac caacgtgagc catctttgag tgtgatttca
     3841 atatctacta caactttgcc aatatcgtga actaatgcaa gataaattgc tgcggcagtc
     3901 caagcgtctc gctgctttga ctgttcttcg ggagccacat tcggtggcaa aatataactc
     3961 tggcgagctt tagctgaaaa agcaataact tccaaaccgt gatcgagcat tccaccaata
     4021 tgagaatgat gatgtgattc tgaagctggc aatagttgaa ccatttcagc gtaacgttct
     4081 attggttgct gataaaatgt ctcgaacatt tgacggttca ttgatacctg ttgccaaagt
     4141 agtccaagat acttttgacg taattccgta ttcagtaatt gagtagcatt ttggggatat
     4201 agccaaccat cgtcatcttg ctcaatagag aaaacagtgt cagatttgac cgcactttga
     4261 gatgtgtgtt taccaaaaat tttcttgaaa attgattgca ttgaaagaga ccgaaaagta
     4321 tcaattttgt gttaaatgaa agccgtttag ccctttgccc ttttgggcaa gacctttccc
     4381 cttggaaagg ttacctttca ccctttaggg gttatccttt gcccttaagg actcctttat
     4441 ccttttgcca tttagggtga gcttggaata tattttgtag tgtataaata tatttctgtt
     4501 aagttatcta aaaactctca aatattttta aatagttttt gtatcaattt acactaatgc
     4561 taggagaata tagactttaa atgctattga cacaattcac agagttaaat taaggtagta
     4621 aatgctgtcg gcaatatcgg ttggtatcaa tagtcaaata tttattgaaa attcagttgc
     4681 tgatataaaa taatttagcc accttatttc taaggcggct attatttgtt agtaaaatat
     4741 tagctcatta tcatcaattt catctaaaat tgagatttga gataaatctt ccactatcac
     4801 tgatttttct atattgttac cacagccttt ctcagtagtg ctatttacaa gtggtgcaat
     4861 ttgttgctcc agtttatgag accaatttcc catcaaatga gccagcgtat acatttgaat
     4921 ttttgtttca ttcaatagcg tatcaccaac tacaatacaa gcaggaatat gtaataacga
     4981 tagctggata taacacatca tggcagctgt aaaatcaaca tcttgacaat gaacccaaag
     5041 ttgttgttgg ggattgtatt tcgcatcaaa catcgcatta acacaaccaa tcaccattac
     5101 acccgaacca caagttggtt ctgataaagt aacaaatccc tgttgtgaga tgattctatc
     5161 acagtcctgt agtgtaactt tcgccattag atctgcgatg tgagatggtg taaagtattg
     5221 ccctctataa ccatcaccaa gattgagatt cataaatact gagcctaaga aatcatagcg
     5281 tttttgtgtt aaagcattca ccgtaacagc taacaattct gctaattgag taaactcaga
     5341 atctgaatat cgtgccttag catgagcaaa gcgttctcgc aaattaggtt ctgcttgatc
     5401 tcgatacgtt actaggtaca tatcaagtgc agagagtgta ataaaatcat aaaacacttc
     5461 tgaacgtcga taatgtggta cgatacgttg aaataagctg ataaattgct tttcaaagtt
     5521 ttccattaga ctactcctta aagtttacgg agtaatcccc ctagggaatt acccctaggg
     5581 tggaaaaatt aattaaggct attcaagttt ctcttcgaac tcatcttcaa attcttcatt
     5641 aaagacttcc tcagcaaaac tgcgaatacc cctatcatct atgtaaatat tgcagtatga
     5701 gccatcaaga tttgcgatat atttgcccgc aaaccacatt cccggctcaa aaaatgaaag
     5761 tataaactca atgtcaggaa aggcagtaca aagtgcttgg aaccaaccat caggtggtcc
     5821 ccatggcgta tcaaataggc aattaataga tccattatca ttaaagctaa cttgacagct
     5881 atctgaacat acattccatt tacagcccca ctgttcattt gaccagtcat accaatcttt
     5941 gtaaccatgt tgagctaggt tagacagata ttgctggcct aatgcgaggt ttagccataa
     6001 tatactttgt tgttcaggac gttttatcaa ccagttgata aaatgaccta catcccagcg
     6061 atgatgcttt gccttagcat atatccgatc aatttcggac ccatagatat actttttgag
     6121 tagagggcgt gttaaacgtc tatttggtga aatttttaga aattccattg ctctatcacc
     6181 aagactactt gattcaatgc agattgattc tggcattgga acgagtaatt caaagtctaa
     6241 acaccattta tcactttcag tttttctgaa aagcttagga ataatttgtt tagcttggat
     6301 acaatcgcaa aaaatttgta gtttattttc acaccagttt ggcataatgt actcctaaat
     6361 aaagtagggg tacacttgcc ttgaggcaat gtaccccaag ggttaaaaga taatcgatac
     6421 ataattccta aaggattatg tattactatg aaagattgtg ttgaaagtac ctttcagcaa
     6481 agagttaagc tgcttcttca aagacctcgt ttttatcagc cagctgtgag atatttaatg
     6541 catctaacat atattgacaa gcttcacgag ctttaccaga agcccggaca atagcccgtt
     6601 tatcttcttt tataactctt atccaacttt caatatatgc cgcattttga ggtaccgtat
     6661 caaatccaag gtaggcacac aaaaatgctc cccccatttc ggcaaccaac tcctcaaaag
     6721 catagacttt gtttccaaat tttgcttttc cggaggtaat accctcacga tcgagccttt
     6781 tagcagcacc agttgcatga gtcatttcgt gcaataacac actatgaaac gcttgagcat
     6841 tttcaaactg ttttatttcc ggcattacaa ctaaatctgc actgggttga taatatgccc
     6901 gattactcgg tttcatttcc acgtgtaaat ccattccttt gataatctgc cgaatatcag
     6961 caaaaatctc gtattggttt ggatccgatg taggctgttt aggttctgat ataggatcgt
     7021 acagttcctc gggtaaattt tcacactggt ctagattgaa cagattgtgc ttcttaatga
     7081 aaaagtgttg ttcaatttct ggattacctt cctcgtcata cacaatattt ccctcctcat
     7141 caagtttttc tctcttatca ggacggtagt tcattacaac agtagctttt tcacctttac
     7201 ggatatatcc gccgagctcg ttagcttttt ttgctgtaat ccacttactc tgtttgtaac
     7261 cgtattctgc ggtagcaatc cagagtaata gtgtgttgat accagaatac aatcggttag
     7321 agaccgcatt acgaggtaat gccatattac attctggatg actccacggt tttaaccatg
     7381 gtgcagtccc ctgttccagt gctgcaacaa ttcggtctgt gatatgttgg tataaatcaa
     7441 atttagtttg agtgttcatt agtgtttctc caaagttcag gtagaaaatg gggaaacact
     7501 attaccctta tcgggcacta gtttccccga tgggtggttt aaaatctcaa cagagatagt
     7561 ttttctaggt tcatcaaaac cagtagaact gcctataatg cagtaactac agataatttg
     7621 ttaatcagta ttgattcaag ttaaacataa tcctcatatc gaaaattact ttggtaatac
     7681 aaagttacat tatttcagat ccattaaagt aaacgttgaa agctattagc agcaataaag
     7741 tgataacttt tttccgcagc ttctgtttcc gtaatcattc cctgctccag caaaacatgg
     7801 gtgattccat tgaaaaactg atgtaataga aatgaaataa aacctgttgt ttcaactttt
     7861 actgggcgac aatgaaactg catatcctgc caaagtttaa tatcatcttt taactgttga
     7921 gagctcacaa tttcatatac aacagcagaa atattaacta aattaccgtt gttattcagc
     7981 caaattgtat aacgattcca atctcctttt ctcattggct ctatacaaat gtgaaatagg
     8041 tattggtagg ctttattatt taaattgcgg ttatcccaga tgtatttgag taaatctaaa
     8101 tcgtgtttca taatgtttct ccaaaagaaa aaagtggaga aacatcttac ctatagggaa
     8161 aatatttccc cacagggtaa aaaacaatct cgataagcgg tcaaattgaa ataaaaaacc
     8221 tacaaatcag gcatgcaagt aggcaaaacg tgcggcatta ctacgagcag aagctatagc
     8281 attactaata agctcttgtc gataaccact caatgaatgg tctgtcggcg aatagcttac
     8341 gcctgtaatt tcatcgctac ctagttgaat gccactttcc ttatcagtaa cggttgctac
     8401 aaaatcagca tagcaaagtt tcccttgtag gatttcctct atcattgcct caaaatcgca
     8461 gacatcacca catagccaat caacagactc tgaataaaat tcagaggatt tacgtttaag
     8521 ttctatcaga tagttttccg tgttaaattt gaaaatagtt tccgtctgat acggtgaggc
     8581 ctcaataatc tgatagccat tcgattctaa ggcacaggaa gtatctttaa tatactgacc
     8641 taaatcttga ataaatccat cccacagggc tttgtatttt tccacttttg atgtagggaa
     8701 ataccactct tttcgggcat cacgatcata gaaaaatgcc aaatcatctg ctgttctaac
     8761 agaaagctcc atcgtattac aatgcgaata gcggtaccca aaactatttc gtatgatttc
     8821 aaaatccacg ccatagtgag gctcccaaga ttcaatgtga ttcagcagat tagaaaacat
     8881 tttttgtgtg cgtttctgag gatttagctt gttgaaaaga ttaattaacg tctccgtatt
     8941 aagcctaccg tagaatgcta cgccatcgcc ttgacaatga gaaagtgaat actcaatgtt
     9001 taagcaatta ggaaaaccag ctttaacaag agcgtgttta aaataagtgt ttaagactga
     9061 gccagacatt gcgcttctcc taaaattaga gggaaacaca ttaccctttt ccggaaattg
     9121 tgtttcccga aagggtgaaa gattgattac cacttatcga agttaatcgc tctgaattta
     9181 taaacggata taggttgatc atagagttct gtttccgaaa tccaattgtg ttcaaccaag
     9241 atttctctga caagatacat aaatgtactc atcaaatgac gactatgact aaacccgttt
     9301 ccaccaacat aagcaaaccc tctcagggtt ttgcgaattc ctgctttaac aacaaggtaa
     9361 gtaatatcaa cctcgccata agacgggcag acatcaaagc gagaaaaaac agaaaatgct
     9421 ttgccaaact tggtctcacg ctctaatttc acactgaata gatcatgtgc atggcgtaaa
     9481 ttccaaagta cactgtataa gtgcaaatct gtttcggtat attgaatttt tttacgagcc
     9541 ataatgtttc tcctaaaaaa taaaagggaa acattacttc cctctgggga taatgcctcc
     9601 ccttgtgagg tataagaata ggatgtgaat atgaagttgc ctatgctcga ctaacaatta
     9661 gcttgccgtt ctgctcggac acactcagaa agcgaaaatt aagtccttgc cgagacggca
     9721 tttgttgcat aaatcgcacg cttttgatgt ccttatctcg attttgccac gcttctaaag
     9781 ctctatgact aatttcttgc tgtaaggctt gatgctctga tgtccattca ttaagtttag
     9841 ttggtaaaac atctccaata caggaaagtc taatatgaac taacatacat ttctccagaa
     9901 taaggggaaa tgcattcccc ttaagggaaa caacatttcc ccgatgggtg agttaaatta
     9961 gattaaagag agctgagtac caaaaacggc agccatacca catacaaagg caataatggc
    10021 agccaacaaa gtccagaaaa acatcttacg cttaatgcgg gaaatttcct gttcatattc
    10081 ggctgcttgt tcgtctaagc acatttgcag ttctaaggct cgcatttcat cttcttcagc
    10141 aatccgttga ttgatgcctt tggtgacttc aacatacttg cttttggctt tatgtttcgc
    10201 tgaaacaaaa atattaccta gcttgttgcc aagtttccaa aaaagagaag gttttacggt
    10261 tttggatgat tcaaacggga taacatccca tcctgcggtt tgttgactca tagcgagttc
    10321 tcctaaaagt taagtgaata aaattcctca ggagatcgca attccaaggg aattgaaata
    10381 tccctcggaa ggtaggtgtg taggtagcat tcctgcaaat ttgcagagtt ccctttcaga
    10441 atgctgggag acattttggg taaataactc aactacctct aaggatagcc gccgcttttc
    10501 aagagttatg cgacttttaa gggctgtatc tacagcgtct taatgcttaa tatcatacga
    10561 attcctccaa taaaatcaac cgtttttttg ttcaaaaaat atctcttttt tgaaaagagt
    10621 ttttcctatc ctcaacataa aaatctcgct aattttctgc ttatttgttc gggaggagag
    10681 cgtgatgaaa gtaagtagat ttctgggata ttgcagtata gtaacaggtg tgttttcgcc
    10741 ccttgcacaa gcacaaccca atatcatcgt ctataccaca aagatgtacc ctattcaaaa
    10801 ttcacaactt gcttcccaga tttattatct tgaccaagta gagaattttg aagagtcaat
    10861 cagtcgaaac ctcagtaaat caccagagat tgccgaacaa gaaatgcgtg cattctttaa
    10921 ttcagcagat tggaaagccc aagagcaaca attaaaagac gcttatcaag gcgtgatcag
    10981 tggatggcaa aatggcatta agaaagtacc tgcggtgttt tttgataatc cacaatcttc
    11041 tccgagtgtg atttatggta cgactgacgt acagaaagca ttagatgaat ggcataaatg
    11101 ggttaaacaa caaggtgaat caaaatgaaa aaaacgtttc ttacgatact gatctctgcc
    11161 agtttagctg tcccaacaac cttatatcct caaccagcca gagcctcatt gaataccgct
    11221 tccattgctg catcaagtgc ctcaacaagc tgtttggaat ataaagttgt tggaacctgt
    11281 ttttggttat tttgtaccta ctttggatgt aaggttcgca catcaaccaa aattaagcat
    11341 tatttacctg aaatggttgt ttcatcttat aaccacgatg ggcaaacgcc atggacagaa
    11401 ttacaagctc tcaatcctgg tgtaaaaggt ggagaatacc gttctccaca acgccaatac
    11461 tctcaactca ctttcaaaaa tgcggatgcg tttggacacc cacaaggagc tatcggtcaa
    11521 ttattaggaa atacggggta ctattgtaaa actcaaacta cgccatttat gccttacttt
    11581 ttgagtgggc tggatttttt tgcctggcgt gaaaatatgc cggaaatgtt ttacccggaa
    11641 gctctgactc cgggaatgcg ggaagttggc cgtgtaggcg atagctgggg aaatatttac
    11701 ccacgttccg gttgggtaac ccaagcacac gattataaag cctctgcgac cattgtgcag
    11761 agagtggcag acattgtgag ccgaacagct cagccacaca tttatttccc agcagccaaa
    11821 acaggtggtg caggagaatg gcctccagga ccggtcgaag agggacaagc aagaacacat
    11881 aaatggcaaa tactttaccc tcaaatgtca aatacctgct ctgtttttcc taatggaggg
    11941 caaacagata cctattcttc tcaaatttca aatcaaggtg attatgcttg ggcattatgg
    12001 cgaccttata gttgttgcaa acgccgtggg caaacattcc tttacagtat tgattggtca
    12061 cactaataac attgggagca ataatgaaat ctcactttaa cttcaaaaaa tcccacttac
    12121 ggatcacgac agcattatta tcaagtgtat caggactatc ttatgccgat tcgattacgg
    12181 ataaactgga atttagtaag tcggattcga ttatttcaga ccgtgttttt taccaaatcg
    12241 gcggtggaat gggttatatg gctccaccta gtcgtggtaa taccaaagtt gttgatttag
    12301 gaattggttg gaaagcgaat ttaacctgtg gtaattttga tattaaaacg accattaaaa
    12361 atgatttaaa cggtctcaaa gacggcttta aagatttaat ggggaatgtc attgattcag
    12421 cgaaaggtgc ggttgcaagt atgcctgcaa tggtattgca acgggccaac cctcaactct
    12481 acgatttact cacaaatggt atgtaccaag gtaagctgga tttcaaccgt cttaaaacca
    12541 gttgtgaaga aatgtccaaa gttttagcag atcatacact gggaggaaaa tgggggcaag
    12601 cagctgattt agaaagctat aagcaaatta cctcctctca acctgatgca aaacaagctc
    12661 aaaaagacct ggaagataaa aaagggaaag atgggcgagt ttggatagga ggtcagaaaa
    12721 aaggtgggga aaaccaagaa gctatcaatg ttgttggcga tgttgtcaaa gctgggttta
    12781 atttactgaa caaacgtaat gccttagata ccagtacaat ttcaggttca agctgtgatg
    12841 ggaatctttg ccaaacttgg gataatccac aaacagcagc cgatttttta actaagatta
    12901 ttggtgaaca atctatttcg acttgtaaag aggattgtgg cactaaaacc agctcaaaag
    12961 ccggtgtagg cttgagtccg gaaattgagg aagaacatgt tcgtactatt gtcaaattag
    13021 agaatgtact gaatatggat gtgcctaagg ctgaattgtt agctgatttg agttcaacta
    13081 ctgtaccagt aacaagaggg cttattgaga gtcttcgaga tgatcctgat gttgaggtat
    13141 taagccaacg cttatctgca gaaattgcga ctagtaagat aatggaaaaa atgctcctgg
    13201 ctcggcgagc agtcttagct ggtatgcgtg agccaaatgt cgctcaaaat gcggatgcac
    13261 aagtagaact ggaaagagta ctcaatatta ttgaccgtga aatttcccaa gtaaaactag
    13321 aaatggatat gcaaaaaatg atcaccggca atacggcttc ggtgattttg caaagcaaat
    13381 ccgaacgaga agctcttgct ggtgctcata gtttatctca agacagtctg gataaacgtg
    13441 ttcaaggact tgaaaacggt aatgttgcat taactgattt agaggcaggc tctaatatta
    13501 acctctctcg tagaaatatt gcattgagta tcccgaatat tccgaatgta gctgctctca
    13561 tacctaatct gccaaatcga ggtggttcag gtgtaggtgg aaatttccca tcactcgcac
    13621 aaatcagcgg ttcaacgatg gatcaagcaa caggattact acgtaatttt gaaggcttta
    13681 tctctaaggc tcaatgggat gtaaatgctc atcgagtagg atatggttcc gatacaatta
    13741 cccgagctga tggtacgatc gtaaaagtaa ccaaagatac ggtcattacc aaagaagatg
    13801 cagagcgtga tttggcccgc cgaacagcta tcttcgcaaa taatgtgaga aaagagcttg
    13861 gagattcaaa ttggaatgcg ttaccgccga acgctcaagc tgttttagtg tcttatgcat
    13921 ataattatgg ttcacttgct aaaacaaaaa gcgtacttga tgcagccaga agatcagctc
    13981 aaagtggtga tatgaatgct ttagctactg caatcagaaa tcgccaagtt gataataatg
    14041 gcatcaatgc acgtcgccgg aatcaggaag ctgactatat tcttggtaaa aattaacctc
    14101 ataaggagtt acatttatgc gtaaattatt aggtattact gtacttacac tttgtacaac
    14161 ttcagcattt gcaacggata aaaatgtggt attttcttgt accagcacag aaggtaaacc
    14221 tctcacagtt aaacgggtag gaaatgatta cgagtattcg tatgataaaa ctatcttcaa
    14281 aaacccaatc aaaaaagcgg tgaccaacga tggctcaatt atcgctagag gatcaggttt
    14341 taccacgtat gcattagaac tgaaaaatga tggtttgaag tatgtagttg ggtttgttca
    14401 accaaatggt aactcaaaag agtttattga gcctggagca acgattagcc gtgataatga
    14461 tcaaccaagc attggctctg tagattgtga tccttacaaa aaaatctatt ataagtttga
    14521 tgttcattta atgaatacct tgtaatgcga taattcaata atatggggga atggcttgat
    14581 ttttcatccc ccatactcta ttatatagat gtggtgctag agccagccca cgttaaaaaa
    14641 tacaaagctc ggtagatgaa ctattgtggt gccagagccg gcccacgtta aaaaatacaa
    14701 agctcggtag atgaggcccc ttaagtcgta agatttaagg ggttttgctt aggatataaa
    14761 atggatatta caacacaaaa tattgaactt agatacttat ctgagcagtt ttaccttgat
    14821 gtcgctccac atctgaaaga aattttgctt aaagagactc gcccatactg tgttctatta
    14881 gttagagtta aaaatttaga ttttgcccta ccattgcgtt ctaatttacc tgaaagagaa
    14941 ggagttggaa ttaaaacgat acctaatcct caggaatacg gcaaatttaa aggaattgat
    15001 ttctcaaaag ccattctact gacagataaa agctatttaa aaacagatac cgttcagctc
    15061 aaaaacaaat cagaattgtt gaatatccaa ggtaatgagc gtagaattgt tcgtgaattt
    15121 aagaaatatg tgagtgaata tatcactgca cataaaaacg gttataaatt agatcataaa
    15181 tttgaatata caactttaat taattatcat actgagctga aaatcagcta attagaataa
    15241 ttggaggagc tatgaaattt atcgatttcg gaaagcagct cgctaaccca gttaaattta
    15301 tcaaacagaa tactgcattt ttacctaagc ctattcaaca agtggtcgtt tttgcggtaa
    15361 tttttgcagg attgcctcta tttatcttgg gtttctttat tctcagaata tgggcttata
    15421 agcatatttc tttgtatagt gaatataaag atatggctaa ttcagaaata tcgtctaaag
    15481 atacagattt aaaatcactt ttttctgatg atgaagaaca agaagatgat gaatatcaat
    15541 atgggtatga tggaccaggt atatatctag gtaattaccg tgttgatgag taaaagtaaa
    15601 tagagtggta tataccactc tattattcag ttgttagatt atttccctat cttggaaccc
    15661 gctgttttag agtctctaga accagtagtt aaatgacttg caaactctcc catttttact
    15721 cctacccaag acatactgcc tagccaaatc gctggtaaga ccaagaacat agaacccatc
    15781 acaaaattca caataatatc gtcttgtgta ttttcaagga aataagggtt tattctgcta
    15841 tgtgtgcctg aatcatagag gaccgacagc aaccaagagt caagccatct agctagttcc
    15901 caccaaaatg tgagtgtaac taatgcgaaa ttcacaaaag ttagcgtaac caatgttttt
    15961 aacgaataac cactcataac cataattaaa ggcgtgagaa taatcaatgc cattaatgca
    16021 aatgaatgca ccatcggtaa tgcttgccgc atcgaatcaa aagcagggaa tgctccgata
    16081 ctgcctaatg acagaccaaa cattgaagct gttttagtca cttcatttgt aaatgatctg
    16141 tctaaatttc ccccataccc gggataaact ttccctctcg aaatatccat attctcagct
    16201 cgtaatacgg tacgaagtat ggattcatcg gaattttctt tactgctgaa aaaatcaatc
    16261 acttttgcag agaagttctg ttttacatca tctaataaac gatcttttaa accattattc
    16321 gccgtatccc accactctgc acaatttgga aaaccaccct ctccattatt cggcaatcca
    16381 ttatcccgag aagcattata gggaaataga ctatgaggtt gttgggctcg ataacgggga
    16441 taaagctcgc tatttgcaat caaaatacgg ccacctaacc agctagtctc acgaacctgt
    16501 gctgggctca atgaaagttg gctattttga attttctgac gtgccggtac atagcattgt
    16561 tgtacaaata agcgaacctc tgtcaataat gctggattat tgattttctc gtgttgaact
    16621 tcaaaacgaa cttgacgtaa atccggtttg cagggaattg aagctgttaa ggcgtgtgtt
    16681 acccctttgt tgatttgatg aaataatccc caccagatag ggactctcgc ttgttgatca
    16741 cccaattcag agttcatttg
//
LOCUS       DANMCL010000062        16590 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.062, whole genome shotgun sequence.
ACCESSION   DANMCL010000062 DANMCL010000000
VERSION     DANMCL010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16590
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.062"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(92..1675)
                     /locus_tag="PXF40_001784"
     CDS             complement(92..1675)
                     /locus_tag="PXF40_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5803106.1"
                     /translation="MKKQFEHNESRRGFMKLIAGVGAGMAFSGTLGTFTPKAFAAPAA
                     GSTIEAGIAYPISTGFDPLTSSGASSMAANLHIFEGLVDLHPATRKPYLALAAAEPEK
                     IDDVTYRITLRDGAKFHNGNPVTTEDVVYSFERVLDPAKASLFAQFIPFIDTVKKVDD
                     KVVEFKLKYPFALFKERLTIVKIVPKAVVEAGQAAFDANPVGTGPYKFVSATKDDRIV
                     FEAFADYNGGYPAQVEKMTWFLLSDDAARVTAQESGRVQAIESVPYLDAERLKRKGTV
                     ESVQSFGLLFLMFNCEKAPFNNPKVRQALHYGLDTQKLIDVVFLGNAKAATSYVQDTH
                     PDYVKANSQYDFDKAKAEALLAEAGVTELKFELLATDHSWVKECAPLILESWNSLKGV
                     KVSLKHLQSGALYGTHVDKGAYEVVIAPGDPSVFGNDLDLLLSWWYRGDVWPKRRFRW
                     SETAEYAEVQKLLDEAAKNPAASKEAWAKAINIIAEQVPLYPIIHRKLPTAWNDKALT
                     GFQPLPTTGMSFIGVGRAK"
     gene            1897..3054
                     /gene="hemW"
                     /locus_tag="PXF40_001785"
     CDS             1897..3054
                     /gene="hemW"
                     /locus_tag="PXF40_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HDL5803107.1"
                     /translation="MNLILPPLSLYIHIPWCVQKCPYCDFNSHAQKGLIPEQEYIEHL
                     LADLSQDLTAYRVAIGDRKLYSIFIGGGTPSLFSAEGIAYLLIEVEKRIAFEPNIEIT
                     LEANPGTAEAERFLGYAQGGVTRISMGIQSFEPEKLLKLGRIHDANEAKQAIKFAQNS
                     AKSGLQSFNIDLMHGLPNQSVKQALADLETGISLNPPHLSWYQLTIEPNTMFYYRKPT
                     LPDDDELWDIFEQGHQLLTNAGYEQYETSAYAKKGYQCRHNLNYWRFGDYLAIGCGAH
                     GKISYPTGEIYRFSKIKHPKGYMRGEYRYSQDLIELDDRPFEFFMNRFRLLEATPKQE
                     FEWFTGLDREVVRPTIDWALNQNYISETATHWQITQHGKLFLNELLEGFLE"
     gene            3197..3679
                     /locus_tag="PXF40_001786"
     CDS             3197..3679
                     /locus_tag="PXF40_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HDL5803108.1"
                     /translation="MIDKQIRNSTAEFLIFTQQNGAENITVRYEDNEIWLTQKLIAQL
                     FDCSTDNVSLHLKNIFNSRELDPNSVTEDFSVTAADVKNYRTKHYNFDAVISIGYRVN
                     SVRATQFRQWATKVLRNFAQKGYVIDRQRMENGTFLNEDYFEQLLAEIREIWLSERRS
                     "
     gene            3648..3845
                     /locus_tag="PXF40_001787"
     CDS             3648..3845
                     /locus_tag="PXF40_001787"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803109.1"
                     /translation="MKFGYLNGVLEGKGKMRFDEAKLHAESEFEKYRIVQDRLFESDF
                     DKVLKEMLRSENQYRPSFSTT"
     gene            3932..4399
                     /gene="bcp"
                     /locus_tag="PXF40_001788"
     CDS             3932..4399
                     /gene="bcp"
                     /locus_tag="PXF40_001788"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HDL5803110.1"
                     /translation="MNILQAGDKAPKFTLQNQADEPVSLSQFAGKKVLVYFYPKALTP
                     GCTTQACGLRDSKSELDELNVVVLGISTDLPKKLAQFVEKKALNFTLLSDPDHQVAEA
                     FGVWGEKKFMGKTYDGIHRISFLIDEQGGGEQVFDKFKTGEHHQMIVDYLRGR"
     gene            4399..4947
                     /gene="gmhB"
                     /locus_tag="PXF40_001789"
     CDS             4399..4947
                     /gene="gmhB"
                     /locus_tag="PXF40_001789"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HDL5803111.1"
                     /translation="MGKKAIFLDRDGTINIDHGYVHQIDDFQFIDGVGKALKQLQDKG
                     YLLVLVTNQSGIARGYFSEAQFMQLTEWMDWSLDEDYGVVLDGIYYCPHHPEGKGEYR
                     KDCDCRKPKAGMFTQAIQDLNIDPSQSYMVGDKLEDILAAEAAGVKTKVLVRTDKAVT
                     EEGQAKADLVLDSLVDLVKYIK"
     gene            4952..5791
                     /gene="queF"
                     /locus_tag="PXF40_001790"
     CDS             4952..5791
                     /gene="queF"
                     /locus_tag="PXF40_001790"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HDL5803112.1"
                     /translation="MNYNDKSLSALKLGQKTEYKSEYDASLLQPVPRKLNRDSLGITQ
                     EQPFNRGADVWTCYELSWLNQNGLPQVAIADVAIDFKSENLIESKSFKLYLNSFNQTK
                     FSSIEEVGKTIQADLARCASGQVSVKIYQLSHYTQQPIVDFAGDCIDEQDIQIDSYAF
                     STHYLENIAEDELVEETLVSHLLKSNCLITSQPDWGSVQIRYKGKKLNREKLLRYLVS
                     FREHNEFHEQCVERIFCDLMQFAEPEKLTVYARYTRRGGLDINPFRSNFEEVPENLRM
                     ARQ"
     gene            5983..7116
                     /locus_tag="PXF40_001791"
     CDS             5983..7116
                     /locus_tag="PXF40_001791"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HDL5803113.1"
                     /translation="MLIFMMNEYSPNYYIGVMSGTSLDGVDIALLDFAKNPPKMTACD
                     FFPMPEELRADISALLKTGETNLQKLGEIDHRLGLLYAETINAFLAKNQLKAEDIQAI
                     GCHGQTVWHSPDSEYPFTTQIGDMNLVAEQTGITTIADFRRKDMAVGGQGAPLVPAFH
                     QAIFSDPNRLTVVLNIGGISNISVLNPNSPTVGYDVGAGNTLMDSWIEQHQGKRYDKN
                     GEWARTGKLNTELLATLLDESFFAKAPPKSTGRELFNLTWLAKKLENLTACQPQDVQR
                     TLAEFTAQSIANELLRFESSLPRLLLVCGGGSRNPLLMERISALLPEWEVTTTTEFGL
                     DIDYVEAAAFAWLAYQRIHNLPSNMPSVTGAKKAVSLGVIYPA"
     gene            complement(7113..8171)
                     /locus_tag="PXF40_001792"
     CDS             complement(7113..8171)
                     /locus_tag="PXF40_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5803114.1"
                     /translation="MAEILFRSCLCCNAKRIFYLLTFYKGFETSQIATAFSLLVFTSQ
                     AFSLFAGSWGDSFGRYPIMMLGCLLDALAYILLLTTKNYPLLLLATFFFGLGSTLFST
                     NARAFLLANIQDTGDSYQLKTKAQGKFLKVSSLSAMVAPLLTIPFIFYRKAEWLIWIS
                     CCIEIIMLFVMFKTAPKTHECANGQCERFKFGALKGILNEQFIFVHLLLFIPLGLGSA
                     FYIIFPYIFTNLLDKPELVSVSFFVNNLIAVLLQSDFSRKLNLTVHKLIYIAPILIIL
                     QIMPWFYALQWLSTITAFLYLVIFATITVYANTALSNMLVKLDNGKNQGLMFGSSKLI
                     LAITTLGVMNVLPYIFLI"
     gene            8254..8715
                     /locus_tag="PXF40_001793"
     CDS             8254..8715
                     /locus_tag="PXF40_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HDL5803115.1"
                     /translation="MRKIKLLHVILSLILGLSAAAIGSYPAIKEIGEERAKKHQDILD
                     LNRELYSAMVNRDFSALQTLLSDDFELYSSTGEVIDKQEWIKLIQKRVLEFDKVDLLS
                     TDFQGNQSSGLLRVNGEFFGIERDNVVVEMNIRTIVRNTERQIKCIVIKEV"
     gene            8728..9621
                     /gene="murQ"
                     /locus_tag="PXF40_001794"
     CDS             8728..9621
                     /gene="murQ"
                     /locus_tag="PXF40_001794"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HDL5803116.1"
                     /translation="MNALGQMITEQRNPNSMNIDRLSALDIVQVINQEDKQVAIAVEQ
                     CLPQIAQAVEKIVQAFEKGGRLVYVGAGTSGRLGVLDASECPPTYGVKPEMVVGLIAG
                     GERALRFPIEGAEDNREQGKVDLQAVNFSEKDVLVGIAASGRTPYVLGAMEYAKQLGA
                     TTVSIASNPNSAMAQIADIAIETVVGPEVLTGSSRMKSGTAQKLVLNMLTTASMILIG
                     KCYQNLMVDVQATNEKLKARAIRIVMQATECEREVAEDTLKLAENNAKLAIMMILGNL
                     DKQKAEDLLSQNQGRLQKALK"
     gene            complement(9705..10649)
                     /gene="prmB"
                     /locus_tag="PXF40_001795"
     CDS             complement(9705..10649)
                     /gene="prmB"
                     /locus_tag="PXF40_001795"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HDL5803117.1"
                     /translation="MFKYNTELLDEISALPIVNDLVTIQDMMRWGYSYFNASDLYYGH
                     GYDNAWDEAQQLVLAGLYLPFDVPETLYSSRLTRVEKERIINLICERLGSRKPVAYLT
                     NSAWFCGGEYYVDERVIVPRSPIGELIKKGFKGIIKNEPHRILDMCTGSGCIAIACAE
                     RFPEAEVDAVDLSLDALDVAQINIERHQVSHRVFPICSDLFNNLPQDKYDLIVTNPPY
                     VDEEDLGDMPEEFHHEPALALGSGKDGLDLTKRILAQAADYLNDDGVLVCEVGNSMVH
                     LIEQFPSVPFNWLEFEHGGLGVFSLTKEELVKHRHLFA"
     gene            10742..11287
                     /gene="smrB"
                     /locus_tag="PXF40_001796"
     CDS             10742..11287
                     /gene="smrB"
                     /locus_tag="PXF40_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HDL5803118.1"
                     /translation="MNDTLLDDEFALFREAAKGTKKLTQNTFVPKAEPRKKLQELREL
                     KEKADTEFYFSDEYEPLLKEENEKVKYLREDVDPYILKQLRRGDFQPELFLDLHGLTR
                     EKAKKELAALILACEREKVYCASVMTGFGTRTLKDQIPRWLVQHPKVMALHQAPKEWG
                     GDASILILVEQPENPEKMFGR"
     gene            11351..11836
                     /locus_tag="PXF40_001797"
     CDS             11351..11836
                     /locus_tag="PXF40_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HDL5803119.1"
                     /translation="MSEQTFHQLTALLDSHRARYRVVGHPSAGKSEEVAKIRGTEIGQ
                     GAKALVCKVKGNGVKQAVLAILPADYQADLTKIAEHLGGLRASLASPAEVAELTDCVF
                     GAIPPFSFHPDLLLVAEPSLFERYAELAFNAGTLERSIILNTEDYQKIVNPVLVQFAK
                     S"
     gene            complement(11838..12587)
                     /locus_tag="PXF40_001798"
     CDS             complement(11838..12587)
                     /locus_tag="PXF40_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HDL5803120.1"
                     /translation="MEKRFEINEQGLSIRCKLFYEKELQQIENVVIVLHGFGSSKDLK
                     SNTKFGERLSSKYKGYAALAFDFPCHGDDARKKLSVEESITYLQLVIDYAKTSLNAKN
                     LYAYGTSFGGYLTLKYLAEKGNPFRKIALRAPAVQIYHSLMNRLSEEERQKLAKGREI
                     LWGFDRQMKISQAFFDELTDITQNDYLDYAEQILILHGTEDEMVALSTSQQFADNNVI
                     ELLPIEGADHAFSNPKLMDIAIGKIVEFFAP"
     gene            12759..13622
                     /locus_tag="PXF40_001799"
     CDS             12759..13622
                     /locus_tag="PXF40_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HDL5803121.1"
                     /translation="MLQLILAILCSVTVGVLIKFARQKGIRIDQSIAVNYIVTTTMTF
                     LLLKPDYQGQSITDIIANNPTSYIFVILSITLPTIFLVQAKALEFAGIIRTDAAQRLS
                     LFLPILAAFTIFGEQVTQNKLIALLLAFVALGCLLWKGNQGMEKGGKIAIISLALVWV
                     GYGVNDILFKQIAKSGSAFPVTLSIAFIGAGCFMFIYLLLKRTQWHVPSVLTGLLLGV
                     LNFGNILFYIQAHQAMKDDPTLVFTGMNLGVICLGTFVGAFFFKEKIHKVNYLGVAIA
                     IVAIICLFYWR"
     gene            13746..14339
                     /locus_tag="PXF40_001800"
     CDS             13746..14339
                     /locus_tag="PXF40_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803122.1"
                     /translation="MKLKALSTLIASSMLYSQSFAVPPEKTAEEPQPFFNKTESGYDL
                     VFNDQNYRLIETELNGEKIQFRAFERIVYVNNPIEPDYQTINLYVPEAYYNNGEINGY
                     QADTAPIFLPNSVGGYMPAKAASYDKKRRDGSPGTILVALSKGYVVASVGARGRTLQK
                     EGKYTGKAPSAIIDSKSAAHKACRFESDHWHHSLCKI"
     gene            14694..15005
                     /locus_tag="PXF40_001801"
     CDS             14694..15005
                     /locus_tag="PXF40_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803123.1"
                     /translation="MVIIMLSKTKSPTLFPKYQNALLQLGENIRLASKRRMFTQTLLA
                     QRTGLSRVTVRKIMNGDPTVAIGYYLMVLGVLGLEQDFTDVGKDDELGRKLQDIELLR
                     K"
     gene            15005..16246
                     /locus_tag="PXF40_001802"
     CDS             15005..16246
                     /locus_tag="PXF40_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA domain-containing protein"
                     /protein_id="HDL5803124.1"
                     /translation="MMNKRIYVFADWETFSQPELVGVLSSDVVRGKENFRFSYDNEWL
                     SSPYVQQIDPNLYLYPGEQYSTDTQNFHIFLDSCPDRWGRLLMKRREAALASQENRKP
                     KLLIESDYLLGVHDMNRMGALRFKTELNGPFLDNNTRLAAPPLSSLRELEFAAIQLES
                     SDNVDDPDYLKWLHMLISPGSSLGGARPKASVIDELNQLWIAKFPSRYDDYDIALWEY
                     LAYRLAIQAKIEMATCRIERFNQEHHTFLTQRFDRHCGKRRHFTSALTQLGYYDGDYE
                     ASYLEIAQFLTESGSNTRIDLAQLWRRIVFNIAISNTDDHLRNHGFIYAQEGWILSPA
                     YDLNPVPLSQGLHLNITDSDNRLDYQLAFDVADFFQLSKQQAVQIYDEVLKEINNWQN
                     VAKEIGIPRQEQEQMKFAFNV"
BASE COUNT         5149 a         3120 c         3557 g         4764 t
ORIGIN      
        1 aagacgaata ttacatcatt ttgattttta tttatgcaag cggtaaattt tttgtaaaat
       61 attaccgctt gcatttagct agccgttacg actatttagc acgaccaaca ccgataaatg
      121 acatacctgt tgttggtaat ggttggaaac ctgttaatgc cttatcattc cacgcagttg
      181 gcaatttacg gtgaataatt gggtaaagag gcacttgttc agcgataata ttgattgctt
      241 tcgcccaggc ttctttagaa gcagcaggat ttttggccgc ttcatcaagc agtttttgta
      301 cttctgcata ttcagctgtt tcagaccagc ggaaacgacg tttcggccat acatcaccac
      361 gataccacca gcttaataat aggtctaagt cattaccgaa aactgatggg tcgccaggtg
      421 caatcacaac ttcgtatgca cctttatcaa cgtgtgtgcc atataatgca cctgattgta
      481 agtgtttgag tgaaactttc acgcctttta agctgttcca cgattcaaga attaatggcg
      541 cacattcttt cacccaagag tgatcggttg ccaacaattc aaattttaac tctgtcacac
      601 ccgcttctgc taataacgct tcggctttcg ctttatcgaa atcatattgc gaatttgctt
      661 tcacataatc cgggtgagta tcttgcacgt aagatgtagc agcttttgca ttgcctaaga
      721 acaccacatc aattaatttt tgggtatcta agccataatg taacgcttgg cgaactttcg
      781 ggttgttaaa cggtgctttt tcacagttaa acattaagaa cagtaagccg aatgattgta
      841 ctgactcaac ggtaccttta cgttttaagc gttctgcatc taagtaaggc acagactcaa
      901 ttgcttgaac acggccagat tcttgagcgg ttacacgagc ggcatcatca gaaagtaaga
      961 accaagtcat tttctcgact tgtgccgggt agccaccgtt ataatctgca aatgcttcga
     1021 aaacaatacg atcatcttta gttgcggata caaatttata tgggccagtc cccactggat
     1081 tagcatcaaa tgcagcttga ccggcttcta ccactgcttt tggtacgatt ttaacaatgg
     1141 ttaggcgctc tttgaataac gcaaatggat atttcaattt gaattcaacc actttgtcat
     1201 caactttttt cacagtgtca ataaatggaa tgaattgtgc gaaaagtgat gctttagctg
     1261 ggtctaatac acgttcaaat gagtaaacta cgtcttcagt ggtaaccgga ttaccattgt
     1321 ggaatttagc cccgtcacgt aaagtaattc gataggttac atcatcaatt ttttcaggct
     1381 ctgctgctgc caatgctaaa tatggtttgc gagtggctgg atgtaagtcc acgaggcctt
     1441 caaaaatatg gaggtttgcc gccattgagg atgcaccgct tgaggtaagc gggtcaaatc
     1501 cggttgatat gggataagct ataccggcct caatcgttga gccggcggca ggggctgcaa
     1561 atgctttagg tgtaaatgta cctaaagtgc cactaaatgc cataccggca ccgacacctg
     1621 caattagttt cataaaacca cggcgggatt cgttgtgttc aaactgtttt ttcatcttaa
     1681 agctccttta agtttttatg ataggggcgg tattatttgc tgaagtgaat ttatcaaaaa
     1741 atgcactttt ttgaattgaa tttatcatat cattaatgtc aaagtggtaa agcaagaatt
     1801 attgaatttg tgatctagct cacgaaaatc tttgcttttc acttcacgtg cttttcgtta
     1861 ttattcgcca atttaatcat aaatgaaaaa ttgacagtga acctgatttt accgccttta
     1921 agcctttata tccatatccc ttggtgcgtg caaaaatgcc cttattgcga ttttaactcg
     1981 cacgctcaaa aaggattaat tcccgagcaa gaatatatcg aacatttact tgcagattta
     2041 tcccaagatt tgaccgctta ccgagtggca ataggtgatc gtaaattata ttctattttt
     2101 attggcggcg gcaccccgag cttattttca gcggaaggga tagcttattt attaattgaa
     2161 gtagaaaaac ggattgcatt cgagccaaat atcgaaatta cactggaagc gaacccggga
     2221 accgcagagg cagagcgatt tttaggttac gcacaaggtg gcgtaacccg catttcaatg
     2281 ggaatccaaa gttttgagcc ggaaaaatta ttgaaattag gacggattca cgatgcaaat
     2341 gaagcaaaac aagcgattaa atttgcccaa aattctgcaa aatcgggctt gcaaagtttc
     2401 aacattgatt taatgcacgg cttaccaaac caatcggtta aacaagcctt ggcggattta
     2461 gaaacaggga tttcactcaa tccaccgcat ttatcgtggt atcagctcac gattgagccg
     2521 aatacgatgt tctattatcg taagccaacc ttgcctgatg atgacgagtt atgggatatt
     2581 ttcgagcaag ggcatcaact tttaacgaat gccggctatg agcagtatga aacctcggct
     2641 tatgccaaaa aaggctacca atgcagacac aatttaaatt attggcgatt tggggattat
     2701 ttggcgattg gttgtggcgc tcacggcaaa atttcatatc cgaccgggga aatttatcgc
     2761 tttagcaaaa tcaaacaccc gaaaggttat atgcgaggtg aatatcgcta cagccaagat
     2821 ttgattgaat tagacgaccg cccgtttgag ttttttatga accgctttag attacttgaa
     2881 gcgacaccaa aacaagaatt tgaatggttt acagggttag acagggaagt tgttcgcccg
     2941 acaatcgatt gggcgttaaa ccaaaactat atttccgaaa ccgcaaccca ttggcaaatt
     3001 acccaacacg gtaaattgtt tttaaatgaa ttactggaag gatttttgga ataatttgca
     3061 aaaaaacgac taaaaaaaga ccgcattgta atgctaaatt acaggcgttt tttgtgatct
     3121 gcgtcgaaaa atcctcattt tttactagac aaaaaaacag tgtttagtag catagccttc
     3181 acaataagga gagcttatga tcgataaaca aatccgtaat agtaccgccg aatttttgat
     3241 ttttactcaa caaaatgggg cagaaaatat taccgttcgc tatgaagata acgaaatttg
     3301 gcttacgcaa aaattaattg ctcagctttt tgattgctca acagataatg tttctttgca
     3361 tttaaaaaac atttttaata gtagggaact cgatccaaat tcagttaccg aggatttctc
     3421 ggtaactgcc gcagatgtca aaaattatcg taccaaacac tacaactttg atgccgttat
     3481 ttcgataggc tatagggtaa actcggtgcg ggcgacacaa tttcgccaat gggcaactaa
     3541 agtattacgg aatttcgccc aaaaaggcta tgtgattgac cgccaaagaa tggaaaatgg
     3601 tacattttta aatgaagatt attttgagca gttgctggca gaaattcgtg aaatttggtt
     3661 atctgaacgg cgttcttgag ggcaaaggca aaatgcgttt tgatgaagcg aaattgcacg
     3721 cagaaagcga atttgagaaa taccgcattg ttcaagacag attatttgaa agcgattttg
     3781 acaaggtatt gaaagaaatg ttgcgttcgg aaaatcaata ccgtccatca ttttcaacaa
     3841 cataaaacaa ccgcattttg caaatttttt gccaagtttg accgcttgcc gtgtataatg
     3901 caagcggtta ttttttatgg aaaaattaca aatgaatatc ttacaagcag gcgataaagc
     3961 ccctaaattt acccttcaga atcaggctga cgagccggtt tctctctctc aatttgccgg
     4021 caaaaaagta ctggtttatt tttatccgaa agctcttaca cccggttgca ctacgcaagc
     4081 gtgcggactg cgtgacagca aatcagaact tgatgagctc aatgtggttg ttctcggaat
     4141 tagcaccgat ttaccgaaaa aattagctca atttgtagag aaaaaagcac ttaattttac
     4201 cttattatct gacccggatc accaagttgc agaagccttt ggtgtatggg gcgaaaagaa
     4261 atttatggga aaaacctatg acggcattca tcgcatcagt tttttaattg atgagcaggg
     4321 ggggggtgag caagtgtttg ataaatttaa aaccggcgaa catcaccaaa tgatcgtgga
     4381 ttatctacgg ggtcgctaat gggaaaaaaa gccatttttt tagaccgtga cggcacaatt
     4441 aatatcgatc acggctatgt gcatcaaatt gatgattttc aatttattga cggtgtcggc
     4501 aaggcgttaa aacagctaca agacaaaggt tatttattgg tgctggtaac caatcaatct
     4561 ggcattgccc gaggctattt tagcgaagca caatttatgc aactaaccga atggatggac
     4621 tggtcgctcg atgaagatta tggcgtggta ctagacggta tttactactg cccacatcac
     4681 cccgaaggca aaggcgaata ccgtaaagat tgtgattgcc gtaagcctaa agcaggtatg
     4741 tttactcaag cgattcaaga tttaaacatc gacccaagcc aatcttatat ggtgggcgat
     4801 aaattagaag atatccttgc cgcagaagcc gccggcgtga aaaccaaagt gctggttcgc
     4861 actgacaaag cagtgacgga agagggtcag gctaaagccg atttggtgtt agatagttta
     4921 gttgatttag taaaatatat taaataaagc aatgaattat aacgataaat ccctttccgc
     4981 cctgaaatta gggcaaaaaa ccgagtacaa aagcgaatat gatgcctcgc ttttgcaacc
     5041 tgttcctcgt aaattaaacc gtgatagttt aggcattaca caagagcagc cttttaaccg
     5101 aggggctgat gtgtggactt gctatgagct atcttggttg aaccaaaatg ggctaccgca
     5161 agtagcgatt gcagatgtcg ccattgattt taagagcgaa aacttaattg aatcgaaaag
     5221 tttcaagctc tatttgaaca gttttaacca aaccaaattt agctcaatag aagaagttgg
     5281 gaaaacgatt caagcggatc tggctcgctg tgcaagcggt caggtttcgg taaaaattta
     5341 ccaattatca cactacacgc aacagccgat agttgatttt gcaggcgatt gcattgatga
     5401 gcaagatatt caaatcgaca gttatgcgtt ttcgactcat tatttagaga acattgcaga
     5461 agatgagttg gtggaagaaa ccttagtcag ccatttgctc aaatctaact gcttaattac
     5521 gtcacagcct gactggggaa gtgtgcaaat tcgctacaaa ggcaaaaagc taaaccgtga
     5581 aaaactgtta cgttatttag tgtcgttccg tgagcataat gagttccacg aacaatgtgt
     5641 ggaacgcatt ttctgtgatt taatgcaatt tgccgagccg gaaaaattaa cagtttacgc
     5701 acgctacacc agacgaggcg ggctagacat caatccgttt agatcgaatt ttgaggaagt
     5761 gccggaaaat ctaagaatgg cacgccaatg attttgttgt tttttgttcc cgtctgaacc
     5821 gcctgagcgt gtttgaattg gtaggtaaat ttactctgag cggagcgaat gtaaatttgc
     5881 cgttaagcca attcaaacta agcgaggata gcggtgaagc tcgggttgcc tttcttttgg
     5941 ttacttttct ttggcaaagc aaagaaaagt aacaaatagc agatgttgat ttttatgatg
     6001 aatgaatata gcccaaatta ctatataggc gtaatgtccg gcacgagcct tgatggggtg
     6061 gatattgctt tgctggattt tgcaaaaaat ccaccgaaaa tgaccgcttg tgattttttt
     6121 ccaatgccgg aggaattacg ggcggatatt tctgcgttac ttaaaaccgg cgaaaccaat
     6181 ctccaaaaac tgggggaaat tgatcaccgt ttaggcttgc tttatgcaga aacgatcaat
     6241 gcgtttttag cgaaaaatca gctaaaagca gaagatattc aagccatagg ttgtcacggg
     6301 cagacggtgt ggcattcacc ggattctgag tatcccttca ccacccaaat tggcgatatg
     6361 aatttggtgg cagagcaaac cggtattacc actatcgctg attttcggcg taaagatatg
     6421 gcagtaggtg ggcaaggggc tccgcttgtg ccggcatttc atcaagctat ttttagcgat
     6481 ccaaatcgtc taacagtggt gctgaatatt ggcggcatca gcaatatttc ggtgttaaat
     6541 cccaattccc ctacagttgg ttatgatgta ggagccggaa atactttgat ggatagttgg
     6601 atcgaacaac atcaaggcaa aagatacgat aaaaacggcg aatgggcgag aacgggcaag
     6661 ctcaatactg aactgttagc gacgttatta gacgagtcgt tttttgctaa agccccgcct
     6721 aaaagcactg ggcgggagct gtttaattta acgtggcttg caaaaaaatt ggaaaatttg
     6781 accgcttgtc agccacaaga tgtgcaacgc acgctggcag aatttactgc tcaaagtatt
     6841 gccaatgagt tattacgctt tgaaagctct ctgcctcgct tgcttttagt ttgtggtggt
     6901 gggtcaagaa atccgttatt aatggaacgg atttctgctt tacttcccga gtgggaggtt
     6961 acaaccacta cagaatttgg tttagatatt gattatgtag aggctgccgc ttttgcttgg
     7021 ttagcttacc agcgaatcca taatttaccc agtaatatgc ctagcgtgac aggagcaaaa
     7081 aaagccgtga gtttgggcgt gatttaccct gcttagatta agaaaatgta aggtaataca
     7141 ttcattactc cgagagtggt aatagctaaa attaatttag agcttccaaa cattaagcct
     7201 tggtttttac cattgtctaa tttcactagc atattagata gtgccgtatt cgcatacacg
     7261 gtaatagtgg caaaaatcac taaatagaga aatgcagtga tggttgaaag ccattggagt
     7321 gcataaaacc aaggcattat ttgaagtata atcagtattg gtgcaatata aataagttta
     7381 tgtactgtca gatttaattt tcgtgaaaaa tcagattgca ataacactgc aattaaatta
     7441 ttcacaaaga atgagacaga gactaattct ggtttatcca gaagattggt gaatatatag
     7501 gggaatataa tataaaatgc acttcctaga ccaagcggaa taaaaagtaa taaatgtaca
     7561 aaaataaatt gttcatttag tattcctttt aatgcaccaa atttaaagcg ttcgcattgc
     7621 ccatttgcac attcatgtgt tttgggtgcg gttttaaaca taacgaatag cataataatt
     7681 tcaatgcagc agctaatcca aataagccat tctgctttac ggtagaaaat aaatggaata
     7741 gtaagtaatg gtgctaccat cgctgacagg cttgatacct tcagaaattt accttgagcc
     7801 ttagttttga gttggtaact atctccggta tcttgaatat tggctaataa gaatgctctc
     7861 gcattggtac taaataaggt gctaccgagc ccgaagaaaa aggtagcaag taatagcaga
     7921 gggtaatttt ttgttgtcag taataaaatg taagctaggg catcgagcaa acagccaagc
     7981 atcatgatag ggtaacgtcc aaaactatca ccccaagaac ctgcaaaaag ggaaaatgct
     8041 tggctggtaa agaccaacaa agaaaatgca gttgcaattt ggctggtttc aaagcctttg
     8101 tagaatgtaa gtagataaaa aatacgcttt gcattgcagc ataagcaaga ccggaaaaga
     8161 atttccgcca taaaatgata ttttggatat tcatagataa tatttaatga gaaaaatgat
     8221 ttctaatata actaaattta ataaggaagc acaatgagaa aaatcaaatt attgcatgtt
     8281 attttatctt taatattagg gctttctgcg gcagcgattg gaagttatcc ggcaataaaa
     8341 gagattggcg aggagcgggc aaaaaaacat caagatatat tagatttaaa tagagaactt
     8401 tatagtgcaa tggtgaaccg tgatttttcg gctttgcaaa cattactaag cgatgatttt
     8461 gagctttatt catcaacagg tgaagtgatt gataagcaag aatggatcaa attaatccaa
     8521 aagagagtat tggaatttga taaggttgat ttgctatcta ccgattttca ggggaatcaa
     8581 tcatctggat tattaagagt aaatggtgag ttttttggga tagagcggga taatgtggtg
     8641 gtagaaatga atattcgaac cattgtgaga aatacagaac gccaaattaa atgtattgtg
     8701 attaaagagg tttaagtgtc gcaactattg aatgccttag ggcagatgat taccgaacaa
     8761 cgtaatccga attcgatgaa tattgaccgc ctttcagcgt tagatatagt ccaagtcatc
     8821 aaccaagaag acaaacaagt agcgattgcg gtggagcagt gcctgcctca aattgcacaa
     8881 gcggtggaaa aaattgtgca agcctttgag aaaggtggac gattggttta tgtcggtgcc
     8941 ggcacgagcg gaagattagg ggtgcttgat gcttcggaat gtccgcccac ttatggcgta
     9001 aaacctgaaa tggtggttgg attaattgcc ggtggtgagc gggcattacg tttcccgatt
     9061 gaaggggcgg aagataatcg tgagcaaggc aaagtagatt tacaagcggt caattttagc
     9121 gaaaaagatg tattggtcgg gattgcagcc agtgggcgaa cgccttatgt gttaggggcg
     9181 atggaatatg ctaagcaact tggtgcgacc acggtgtcga ttgccagtaa cccaaattcg
     9241 gcaatggcac aaattgcgga tattgcgatt gaaaccgttg tcgggccgga agtgctaacc
     9301 ggttccagcc gtatgaaatc cggcacagct caaaaattgg tattgaatat gctcactact
     9361 gcgtcgatga ttttaatcgg taaatgctac caaaatttaa tggtagatgt gcaagcaact
     9421 aatgaaaaac tcaaagctag agcaattcgg attgtgatgc aagcgacaga atgtgaacga
     9481 gaagtggctg aagatacact aaaattagcc gaaaataacg ctaaattggc aattatgatg
     9541 attttaggta acttagataa gcagaaagcc gaagatttat taagccaaaa tcaagggcga
     9601 ttacaaaaag cgttaaaata gaagtatgtc tgctctcccc ttgtgggaga gagacagatc
     9661 aatcattcat tcagaatgat tgatcagaga gaggggaggc agatttaagc aaataaatgg
     9721 cgatgtttca ctagttcttc tttggttaaa ctgaacaccc ctaagccacc gtgttcaaat
     9781 tccagccagt taaacggcac actggggaat tgttcgatta aatgcaccat actgttgccg
     9841 acttcgcaga ctagcacgcc atcatcattt aagtaatcag cggcttgagc aagaatccgc
     9901 ttggttaaat ctaacccatc tttgcccgag ccaagagcta atgccggctc gtgatggaac
     9961 tcttcgggca tatcgcctaa gtcttcttca tcaacataag gcggattagt cacaattaag
    10021 tcgtatttat cttgcggtaa attgttaaac agatcggaac agatcgggaa aactcggtga
    10081 gacacctgat gacgctcaat attaatttga gcaacgtcta aggcatcaag ggaaagatca
    10141 accgcatcga cttctgcttc cggaaaacgc tcggcacagg caatcgcaat acaaccgctg
    10201 ccggtacaca tatctaaaat tcgatgtggc tcgtttttga taatgccttt aaaccctttt
    10261 ttgatcagct caccaatcgg tgaacgtggc acgatcacac gctcatcgac ataatattca
    10321 ccgccacaaa accaagccga gttggtaagg tatgctacag gtttgcgaga gcctaaacgc
    10381 tcacagatta aattgatgat acgttctttc tcaactcgag ttaagcgaga ggaataaagt
    10441 gtttccggta catcaaacgg caaataaagc cctgccaaca ctaattgttg tgcctcgtcc
    10501 cacgcattat cgtagccgtg cccgtaataa agatcagagg cattaaaata gctatacccc
    10561 caacgcatca tatcttgaat agtgactaaa tcattcacaa tgggcagggc ggaaatttca
    10621 tcaagaagtt cggtattata tttaaacatt ggcgtgcctt ttttcgtatt gttaaaatgg
    10681 ctgtgttata ccacattttg ctttgtgtta gaatgtaaaa atgaataaga aggaaaagat
    10741 aatgaacgat acgttattag acgatgaatt tgcattattc agagaggcag caaaaggcac
    10801 gaaaaagctg acacaaaata cctttgtgcc gaaagcggaa cctcgcaaga aattgcaaga
    10861 attgcgagaa ttaaaagaaa aagctgatac agaattttat ttctcggatg aatatgagcc
    10921 tttgctgaaa gaagaaaatg aaaaagtgaa atatctgcga gaagatgttg atccttatat
    10981 tctcaaacag ttacggcgag gcgatttcca acccgagctg tttttagatc tgcatggttt
    11041 aactcgagaa aaagcgaaga aagagttggc agcgttgatt ttagcctgtg agcgggaaaa
    11101 ggtatattgt gccagtgtga tgaccggctt tggcactcgc acgctcaaag atcaaattcc
    11161 acgctggttg gttcagcacc caaaagtaat ggcgttgcac caggccccga aagagtgggg
    11221 cggagatgcc tctattctaa ttttggttga gcagcctgaa aatcctgaaa aaatgtttgg
    11281 gcgttaaaat tcggctgaat tgccaatttt ttattaaaaa cgaccgcttg tgtatcatta
    11341 aggagaaatg atgtcagaac aaactttcca ccaacttaca gcattattag attcgcatcg
    11401 agctcgctat cgagtggtag gacatccttc tgccgggaaa tcggaagaag tggcaaaaat
    11461 tcgaggaaca gaaatcgggc aaggggcgaa agccttagtt tgcaaggtaa aaggcaatgg
    11521 ggtaaagcaa gctgtgcttg ctatattacc tgctgattac caagcggatt taacaaaaat
    11581 tgcagagcat cttggtgggt taagagcctc acttgccagc ccggctgaag tggcagaatt
    11641 gaccgattgt gtatttgggg caattccgcc gtttagcttt caccccgatt tattattggt
    11701 ggctgagcca agtctgtttg agcgttatgc tgaattagcc tttaatgccg gtacgttgga
    11761 acgttcgatt attctgaata ccgaggatta ccaaaagata gttaatcctg tgttggttca
    11821 attcgccaaa agctaggtta tggggcgaaa aactccacga ttttgccaat agcgatatcc
    11881 attaatttag ggttagaaaa agcgtgatct gccccttcaa tcgggagcag ttcaatcacg
    11941 ttattatcgg caaactgctg tgaagtgctt aacgccacca tttcatcttc cgtgccgtgc
    12001 agaattaaaa tttgctcggc ataatccaaa taatcgtttt gggtaatatc ggttagctca
    12061 tcaaaaaagg cttggctgat tttcatctgg cgatcaaacc cccacaaaat ttctcgccct
    12121 ttggcaagtt tttgccgttc ctcttctgac aagcggttca ttaacgaatg gtagatttgt
    12181 actgccggtg cccgcaatgc aattttccga aacggattgc ctttttccgc cagatatttc
    12241 aaggttaaat agccgccaaa actagtgccg taggcataca gatttttagc attcaggctg
    12301 gttttggcat aatcaatcac cagttgcaga taagtaatgg attcctcaac cgagagtttt
    12361 ttacgggcat catcaccgtg gcaagggaaa tcaaaggcaa gggcagcgta gcctttatat
    12421 tttgagctaa ggcgttcccc aaatttggta ttcgatttca gatctttaga cgaaccaaag
    12481 ccgtgcaaca caatcactac attctcgatc tgctgcaatt ctttttcata aaacagttta
    12541 cagcgaatgc tgagaccctg ttcattaatc tcaaagcgtt tttccatttt atgttaagta
    12601 ttgaaattga agatgacaaa attttagcac tatttgagtg caagcggtcg gatctctcgc
    12661 aaaatttgca aattttccgg taaatttaac cgcttgtact agccaaaatt taagcatatt
    12721 tatagaatac agccttcgtt tttaaaagga gaaatgaaat gttacaactt attttagcga
    12781 ttttatgtag cgtgactgta ggcgtgttga ttaaattcgc ccgccaaaaa gggattcgta
    12841 tcgaccaaag tattgcggtg aactatatcg tgactaccac gatgacgttt ttattactaa
    12901 aaccggatta ccaagggcag tcgattaccg atattattgc taataacccg acttcctata
    12961 tttttgtgat tttaagtatc acattgccta ctattttctt ggtgcaagca aaagccctag
    13021 agtttgccgg tattatccga accgatgcgg cacaacgttt atcgctgttc ctgccgattt
    13081 tggcggcatt caccattttt ggtgagcagg ttacgcaaaa taaattaatt gcacttctgt
    13141 tagctttcgt ggcactcggt tgcttattat ggaaaggcaa tcagggaatg gaaaaaggcg
    13201 gaaaaattgc gattatcagc cttgctctgg tttgggtagg ctatggcgtg aacgatattt
    13261 tatttaaaca gattgccaaa tcaggctctg ctttccctgt caccctttcg attgccttta
    13321 tcggtgcagg ctgttttatg tttatctatt tgctacttaa acgcactcaa tggcacgttc
    13381 caagtgtctt aaccggctta ttgctaggcg tgttgaactt cggcaatatt ctgttctata
    13441 ttcaagctca ccaagccatg aaagatgacc caactttagt cttcactgga atgaacttag
    13501 gggtaatttg cttaggcact ttcgttggag cattcttctt taaagagaaa atccacaaag
    13561 tgaactactt aggcgtggcg attgcgattg tggcgattat ttgcttgttt tattggcggt
    13621 aaatatactt tccaaaatta agggcgaaca taatgttcgc ccttaatttt tgagtaatat
    13681 agtgtaaaat attcaataaa ttcgaccgct tgttgtaccg attcatattt cataaaggac
    13741 aaaaaatgaa gctaaaagcc ttatctacac tcattgcctc ttcaatgcta tatagtcaga
    13801 gttttgctgt accgccggaa aaaacagctg aagagccaca gccctttttc aataaaaccg
    13861 aatctgggta tgatttagtc tttaatgatc aaaactatcg tttaattgaa acggaattaa
    13921 atggcgagaa aatccaattc cgtgcctttg agcggattgt gtatgtgaac aatccgattg
    13981 agccagatta ccaaacaatt aatctgtatg tgccggaagc ttactacaat aatggcgaaa
    14041 tcaatggcta ccaagcggat accgccccga tcttcttgcc aaattcagtg gggggctata
    14101 tgccggcaaa agcggcaagt tatgataaaa aaagacgtga cggttcacca ggtacgattt
    14161 tggtggcgtt atctaaaggc tatgtggtgg caagtgtggg agcaagagga cgcacgctac
    14221 aaaaagaggg aaaatacacc ggcaaagcac cttctgccat tattgattca aaatccgccg
    14281 cccataaagc gtgtcggttc gagtccgacc actggcacca ctcactatgt aaaatttagt
    14341 tttacatagt ttgctgtaag catttgaatt ttgaatcgtt tgtgtaggat tgttcaaatc
    14401 atattcgcaa atacacagtt actacgatgt atccagccaa tacatccatt gggattttcc
    14461 gtccgaattt cagacgttct agatcttaca cattctttca agtttgtaaa gcctgaaaat
    14521 cattttttag attgatttta tttgaaaaaa tctatttttt cttttaattc aaatttagtc
    14581 aaaacttcac cagatatttt tttccgaaaa accctctcta cctattttac tgtttacata
    14641 actgctcttg caattgctat aaatggacat tataatttcc aaaaaacata aaaatggtaa
    14701 taataatgct cagtaaaaca aaatcaccaa ctctgtttcc taagtaccaa aatgccttgc
    14761 ttcaacttgg agaaaatatt aggctagcct caaaaaggag aatgtttact caaacattat
    14821 tggctcaaag aactgggctt agccgtgtaa cagtgagaaa aattatgaat ggtgatccaa
    14881 ctgttgcgat tggatactac ctaatggttt taggtgttct cggtctagaa caagatttca
    14941 ctgatgttgg aaaggatgat gagttaggac gtaaattgca agatattgaa ttattaagga
    15001 aataatgatg aataaacgaa tttatgtgtt tgcagattgg gaaacttttt cacagcctga
    15061 attagttggg gtgctttctt ctgatgtagt gagaggcaaa gaaaatttcc gttttagcta
    15121 cgataacgag tggttaagtt caccctatgt acagcagatt gatcctaact tataccttta
    15181 ccctggagag caatacagta cagatacaca aaattttcat atctttttag attcttgccc
    15241 tgatagatgg ggtagattgt taatgaaacg tcgggaggca gctctagcta gtcaagagaa
    15301 tcgtaaacct aagttactaa tagaaagtga ttacctttta ggcgtacacg atatgaatag
    15361 aatgggggct ttacgtttta aaactgaatt gaatggtcca tttttggaca ataatactcg
    15421 tcttgcagca ccaccactgt cttccttaag agaattagaa tttgcagcaa tacaacttga
    15481 aagcagtgat aatgtggacg atccggatta tttaaaatgg cttcatatgt tgatatcacc
    15541 agggtcgtca ctaggcggag ctagaccaaa agcttcggta atagatgaac taaatcaact
    15601 atggattgcc aaatttccaa gtcggtacga tgattatgat attgctcttt gggaatattt
    15661 agcttatcga ctggctattc aagccaaaat tgaaatggct acttgtagaa ttgaacgctt
    15721 taaccaagaa caccatactt ttttgacaca aagatttgat cgacattgtg gaaaacgtcg
    15781 ccattttacg tcagcattaa cccagctggg ttattatgac ggagactatg aggcaagcta
    15841 ccttgagatt gctcaatttt taacagaaag tggttcaaat actcgaattg acttggctca
    15901 actatggaga agaattgtat tcaatattgc tatttcgaat actgatgatc atttgcgtaa
    15961 ccacggattt atctacgctc aagaggggtg gatattatct cccgcatacg atttaaaccc
    16021 agtaccacta tctcaaggat tacatttaaa cataacagac agcgataacc gattggatta
    16081 tcagctcgcc tttgatgttg ctgacttttt tcaattatct aagcaacaag ccgtacagat
    16141 ttatgatgaa gtactgaaag aaattaataa ttggcaaaat gtcgcaaaag aaattggtat
    16201 tccacgccaa gagcaagagc agatgaaatt tgcatttaat gtatagtaat tgacttgtgg
    16261 aaccaatcat cgtagtctat gttctaaaaa agtagcgtta ccttaataac gcaatgagtt
    16321 gttggctcat tgtcaatctg atattaatct aggatgtaaa ggcctagcgg tggcaggcac
    16381 cagaaagacc tgatactaat ctagggtata aagacctagc ggtggcagac accagaacaa
    16441 accaacatct tataaaacca ttagtaacac ttgacttttt tctcaaccat atccgcaagg
    16501 aagcgtagcc ttaaaaacgc aaatgtagga aactaatcta ggcatatata atgcctagca
    16561 gatggcagac atcagaaaaa ctaacattta
//
LOCUS       DANMCL010000063        16491 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.063, whole genome shotgun sequence.
ACCESSION   DANMCL010000063 DANMCL010000000
VERSION     DANMCL010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16491)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16491)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16491
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.063"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXF40_001803"
     CDS             complement(164..1402)
                     /gene="pepT"
                     /locus_tag="PXF40_001803"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HDL5803125.1"
                     /translation="MKQSLLNRLLRYTQIHTTSDPKSQTVPSSQQQWDLLHLLKTEVE
                     AMGLSEIYLDPNGYLFASLPANIDKTLPVLGLIAHVDTSPDFNGENVKPQVIEAYQGG
                     NILLNGSGDYLSPTDFPNLNKLIGDTLVTTDGTSLLGADDKSGIAIILSAIEYLQANP
                     HIPHGKIRIGFTTDEEIGRGADHFDVNAFGADVAFTFDGGPLGELQYENFNADAATVT
                     FFGRSVHPGTAKGKMINALERACEFQHRLPPHLTPATSEGREGFIMLHGIEGGIDKAE
                     IHYILRSFERDELAAFGKMLNDTLAEMQQIYGEHCGKVEIVEQYRNMREVLDDYGYLV
                     EIAENAMREQGIEPNLEPIRGGTDGSRLSFMGLPCPNLFTGGENFHGRFEFISVDTME
                     KATKVVIDICRKFADYDFNK"
     gene            complement(1422..1811)
                     /locus_tag="PXF40_001804"
     CDS             complement(1422..1811)
                     /locus_tag="PXF40_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5803126.1"
                     /translation="MYMLDTNTVSYFFRGNANVVAKLKSINPERLCISSVTAAELVYG
                     VAKRNNGQLSQFLDYFLSSVKVLDWNYRCAELYGKLRAEMEKNGKVMGVQDQMIASHA
                     LAEECILVSSDQAFKMVPDLKLENWLH"
     gene            complement(1812..2072)
                     /locus_tag="PXF40_001805"
     CDS             complement(1812..2072)
                     /locus_tag="PXF40_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5803127.1"
                     /translation="MEKIARLFRNGRNQAVRLPVEFEFDAEQVYVSKKENGDILLSLR
                     SRNTEHWQRLFELLPAVVCDETFLDTKERNQSFEQRDPFEVA"
     gene            complement(2188..2400)
                     /locus_tag="PXF40_001806"
     CDS             complement(2188..2400)
                     /locus_tag="PXF40_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5803128.1"
                     /translation="MRDEYDFSNAVKNPYAKGLKSKSVVTIRIEDDVISYFKQLAEEV
                     NLPYQTLINLYLKDCVEQKRKPTISW"
     gene            complement(2401..2688)
                     /locus_tag="PXF40_001807"
     CDS             complement(2401..2688)
                     /locus_tag="PXF40_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5803129.1"
                     /translation="MEEINGFEWDSEKALRNQQKHGVSFIEAVSVFYDNNAMLIPDPD
                     HSSREERFLLLGRSNKDNLLVVVHCERNTNIRIISARLATKRESGQYKGVH"
     gene            complement(2851..6384)
                     /gene="mfd"
                     /locus_tag="PXF40_001808"
     CDS             complement(2851..6384)
                     /gene="mfd"
                     /locus_tag="PXF40_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HDL5803130.1"
                     /translation="MSLISLNLPKSDGNFQDHQTLGNLVGHSDTLAISQAARAFYGLT
                     VVVTPDTRTALRLEKALPQFAGLPVQLFPDWETLPYDNFSPHQDIISARLSALFELQQ
                     GRQQILLLPINTLMQKVCPPNYLANNVLLIKKGDRFSIQKLRLQLENAGYRAVEQVLE
                     YGEYAVRGSILDLFPMGAEEPFRLDFFDDEIDSIRTFDVDNQRTKTEIAEINLLPAHE
                     FPTDSNGIEHFRAKFREKFGEIRREPEHIYQQVSKGILNAGIEYWQPLFFEEMASLFD
                     YFPAQTLFITFADIQQKAEQFHQDTQNRYESHRVDPMRPLLPPSDLWFAIDEVNRWLK
                     GYPRLTITSEKIRKSAAKMNANVANLPDIAIQSSAKEPFSAFQQFRQKFDGNILFSVE
                     SEGRRETLLDLLAPLGVKPKQVNSLDEAQGLPFSLIISPLDQGFVVETGGHGTRPYDD
                     ELNTNGENDNNYVGAGPVPARNLAIICETDLLGERVQTRREKNRKAVNPDTLIRNLAE
                     LKIGQAVVHLENGVGRYGGLTVLDAGGIKAEYLVLHYANDAKLYVPVASLHLISRYIG
                     GADETAPLHKLGSEAWAKTRQKAAEKIRDVAAELLDVYAKRESQTGFAFAYDKAEFDQ
                     FSATFPYEETDDQKIAINAVISDMCQAKAMDRLVCGDVGFGKTEVAIRATFLAVMNHK
                     QVVILAPTTLLAQQHYENFKDRFANYPVNVEVLSRFKTAKEQKTILQNVAEGKVDILV
                     GTHKLLQDDVAFRDLGLLVIDEEHRFGVRQKEKIKQLRANVDILTLTATPIPRTLNMA
                     LNGMRDLSIIASPPARRLLIKTFVRQSDEMVIREAILREILRGGQVYYLHNDVATIEN
                     CAEKLAELVPEARIVIGHGQMRERELERVMSDFYHQRFNLLVCSTIIETGIDVPTANT
                     IIIERADKFGLAQLHQLRGRVGRSHHQAYAYMLTPHPKTLTKDAEQRLEAMSTIDNLG
                     AGFALATHDLEIRGAGELLGSEQSGQIESIGFSLYMDLLENAVKALQEGREPSLDEIT
                     QHQAEIELRVPALLPDDYLPDVNMRLSFYKRIASSENLQSLNDLKVELIDRFGLLPEA
                     TKNLFAITQLRLSAQTLGIKKIDAGIHGGYLEFKPTAQPDPMKFIALIQKQPAVYSFE
                     GAVKFKFRLALEDNRKRLEFVENLLREVVGG"
     gene            6545..7762
                     /locus_tag="PXF40_001809"
     CDS             6545..7762
                     /locus_tag="PXF40_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter"
                     /protein_id="HDL5803131.1"
                     /translation="MKNKILGSALMIAGTTIGAGMLAMPLTSAGMGFGATALLLVGLW
                     ALLAYTGLLFMEVYQTAPQKDVGVASLAEQYFGLIGRVLATFSLLVLLYALLAAYITG
                     GGSLLAGVMPEMADADMKLKISILIFTAVLGTFVVVGVKSVDGLTRVLFLGKIVAFIA
                     VLLMMLPKAKLENLTAIPLDNLLIISAIPIFFTAFGFHVIMGTINSYLDADIGKIRKS
                     IYIGTAIPLVAYLLWQLATHGVLSQNEFTTILTQDPTLNGLVKATSQITGSTILGEMV
                     RLFSVLALITSFLGVSMGIFEGVGDLLKRLNLPTNRLWLTIATFTPPILFALFYPNGF
                     IKALGYAGLLFAFYGMILPIGLAWKARRQYPNLPYRVIGGNLALVVALIAGIIIMVIP
                     FLIQAGYLPQAVG"
     gene            complement(7842..8348)
                     /gene="hutX"
                     /locus_tag="PXF40_001810"
     CDS             complement(7842..8348)
                     /gene="hutX"
                     /locus_tag="PXF40_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization cystosolic carrier protein
                     HutX"
                     /protein_id="HDL5803132.1"
                     /translation="MISIEQQTALRNELAENPGQILEMLAAKYQCTLEEVMLNLPAEM
                     LKVTEGERFAEVLQQIHEWDDAITLISHTEDTIIEFVGKLPSGSISRGFYNFEHKEGG
                     GLQGHLRYENCAKIYLLDRPFMGKRTVSLIFINKKGNAMFKIFVGREKIGGALKEHQI
                     KALYQLIG"
     gene            complement(8403..10481)
                     /locus_tag="PXF40_001811"
                     /pseudo
     CDS             complement(8403..10481)
                     /locus_tag="PXF40_001811"
                     /inference="COORDINATES: protein motif:HMM:TIGR01786.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
     gene            complement(10448..10831)
                     /locus_tag="PXF40_001812"
     CDS             complement(10448..10831)
                     /locus_tag="PXF40_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HDL5803133.1"
                     /translation="MVFTSYSIKSKKLCPTILALSVSSILSSQATYAEETTAELSEVN
                     VVAKEDVKASIEKKNKEIIQQELIQNNRDLVRYSPDVGIVNQGRHQKGFAIRGVEDNR
                     VGISIDGVSLFLIQKKIPFINAMVI"
     gene            10986..11504
                     /gene="hutZ"
                     /locus_tag="PXF40_001813"
     CDS             10986..11504
                     /gene="hutZ"
                     /locus_tag="PXF40_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein HutZ"
                     /protein_id="HDL5803134.1"
                     /translation="MTTNRQEVLQNRLGPEIEELKQQIKTIMLATIDKDGVPNVSYAP
                     FVINNGEYQVLITTIARHARNLQEVPKVSLMLIEDESKSRQIFARRRLTFDATVRMIE
                     RTDEEWNNSIAALKARHGDLVDELSNMQDFKLFSFKPTAGLFVKGFGKAFDVGVDDLI
                     NVVHLDQGHQTA"
     gene            11654..14266
                     /gene="pepN"
                     /locus_tag="PXF40_001814"
     CDS             11654..14266
                     /gene="pepN"
                     /locus_tag="PXF40_001814"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HDL5803135.1"
                     /translation="MQPKAKLRKDYRAPDFTITDIYLDFQLDPDRTFVTSKLTVVRKN
                     PEATTLRLDGHSFDFLSLKYNGEPFSAFQKDDESLTLNLADVPAERFELEIETALNPA
                     QNTSLQGLYKSGDGFCTQCEAEGFRQITYMLDRPDVLAKYTTKITASKSKYPYLLSNG
                     NHIAQGDLHDGRHWVEWQDPFFKPSYLFALVAGDFDLLQDKFITKSGREVTLEIYVDR
                     GNLDRAPWAMESLKRSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKF
                     VLAKPETATDTDYLDIEAVIAHEYFHNWTGNRITCRDWFQLSLKEGLTVFRDQEFTSD
                     LWSRSAKRIEDVRLLRTVQFAEDASPMAHPIRPEKVIEMNNFYTVTVYEKGAEIIRMI
                     HTLLGEEKFQQGMQLYVARHDGSAATCEDFVKAMEDASGVNLEQFRRWYSQSGTPELT
                     ISDEYDETRKAYRLHISQMTPATHDQMDKLNLHIPLKVALYGEQDGKRIPLQYELLTV
                     SDVLDVTAEHQTFEFHNVTQRPVPALLCDFSAPVRLDYNYTTEQLLTLLKHAENDFVR
                     WDAAQMLYTNELRENLSRYQQHQPLSFSEGLVNALTFVLDNSASLPELTALTLTLPKE
                     TEFAESFKTIDPQGIAVVREFMQHSIAHALQDKLLAVYHQNQCGEYQVVAEDIAKRAL
                     RNACLSYLAFTDLGNALVHKHYNNADNMTDTLAALQAATKAQLSCRDALLADFEQKWK
                     HDGLVMDKWFMLQATRPDDDVLSIVQNLMEHPSFNFNNPNRLRSLVGAFCGQNPKAFH
                     AIDGSGYRFLVDTLIKLNESNPQVAARLIEPLIKLSRYDNQRQTLMRRGLERLRELDN
                     LARDLFEKIEKALD"
     gene            complement(14326..14598)
                     /locus_tag="PXF40_001815"
     CDS             complement(14326..14598)
                     /locus_tag="PXF40_001815"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HDL5803136.1"
                     /translation="MVAKLFSVYGRVQGVAFRFFTLQEANRLGIKGYVRNRDDGSVEV
                     VAEADEQTIAQLENWLQQGSPAAKVERVIVSDYLGSERFKRFEVRY"
     gene            complement(14652..16286)
                     /locus_tag="PXF40_001816"
     CDS             complement(14652..16286)
                     /locus_tag="PXF40_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700110.1"
                     /note="is involved in the transport of the murein peptide
                     L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HDL5803137.1"
                     /translation="MQSKFSLSLLTTSLVLGLSANVFAAKVPEGTTLAEKQEITINNG
                     FEPSSFDPHKIEGVPESQVAYQLFEGLVTKDSDGNIQPGVAESWENTPDYKTWTFKLR
                     QDAKWSNGDAVTAHDFVFAWQRLVNPLTASPYSSYLTYLNVENAQDIIDGKKKPEELA
                     VKAIDDHTFQVQLSQPVPYAVELATHSSLLPVHKATVEKHGDAWVQKGNLVGNGAYTL
                     ADHVINEKIVFERNKNYWNDKETVINKATFLAIANAATDVSRYRAGDLDMTNYALPPE
                     QFATLKKEIPNEVFTARTLSTYYYEINHKRAPFDNVKVREALNLALDRTIITDKVLGQ
                     GQTPTYVFTPPYIHEGEKIQQPAYSKDSMADRKAKALKLLEEAGYSKANPLKFTILYN
                     TNDNHKKIAIAVSSLWKQGTDGIVDVKLENQEWKTFLDTRRNANYDVSRAGWSADYNQ
                     ATTFVNYFLSNSSNNTAFYKSQAYDDAVAESYKATDAAGRAAAYAKAEEQLAKDYAII
                     PIYNYVNPRLVKPYVKGYEGKDPQDDILLRNLYIVK"
BASE COUNT         4611 a         3674 c         3273 g         4933 t
ORIGIN      
        1 ttaaaaacgc tacgaacctc gtagagtctc aacaggtgca tattctatgg atttcagatt
       61 taatgtcaaa taaatttgta ggaaatctgt aaaaaatcgt ttaattggtg aaaaataacg
      121 ctttttgcaa atttttcatc aaatttgacc gcttgcagcc gccttatttg ttgaaatcat
      181 aatcagcaaa tttccgacaa atatcaatta caacttttgt ggctttttcc atcgtatcaa
      241 ccgaaataaa ctcaaatcgt ccgtggaaat tttcgccgcc ggtaaataaa ttcgggcaag
      301 gcaagcccat aaatgaaagg cgtgagccat cagtaccgcc acggatcggt tctaaattcg
      361 gctcaatgcc ttgttcacgc attgcgtttt cggcaatttc aaccaagtag ccgtaatcgt
      421 ccagcacttc acgcatattg cgatattgct cgacaatctc gacttttccg caatgttcgc
      481 cgtaaatctg ttgcatctct gccagcgtat cattcagcat tttgccgaat gcagctaatt
      541 catcacgctc aaagctacgt aaaatatagt gaatttccgc tttatcaatt ccaccctcaa
      601 tgccgtgcaa cataataaag ccttcacgcc cttcgctggt ggcaggggtt aaatggggag
      661 gcagacggtg ttggaactcg caagctcgct ctaaggcgtt gatcatcttg ccctttgccg
      721 tgccggggtg aacgctacgc ccgaagaacg taacggtcgc tgcatcggca ttgaaatttt
      781 catattgcaa ttcgcccaga ggcccgccat caaaggtaaa ggcgacatcg gcaccgaatg
      841 cgtttacatc aaaatgatct gcgcctcgac cgatctcttc atcggtggta aagccgatgc
      901 ggatcttgcc gtgcggaata tgcggattgg cttgtaaata ctcgatagcc gagagaataa
      961 tcgcaatgcc ggatttgtcg tctgcgccaa gcaaagaggt gccgtcagtg gtgactaagg
     1021 tgtcgccaat cagcttgttt aaattcggga aatccgttgg cgaaagataa tcgccactgc
     1081 cgtttagcaa aatattgccg ccttgataag cctcaatcac ctgtggtttc acgttttcac
     1141 cattaaaatc gggcgaagta tcaacgtggg caatcagccc aagcaccggc agggttttgt
     1201 caatattggc aggcaagctg gcgaacagat agccgttggg gtcaagataa atctcgctta
     1261 gccccatcgc ctctacttcc gttttcagca gatgaagcaa atcccactgc tgttgcgagc
     1321 ttggcacagt ttggcttttc ggatctgaag ttgtgtgaat ttgggtgtaa cgtagtaaac
     1381 ggttaagaag ggattgtttc attgtttttc cttactatag tttagtgtaa ccaattctcc
     1441 aatttcagat caggtaccat tttaaatgcc tgatcactag aaactaaaat acactcttca
     1501 gcaagagcgt gactagcaat catttgatcc tgcacgccca ttactttgcc atttttctcc
     1561 atctctgccc gtaactttcc ataaagttca gcacaacgat aattccaatc taaaaccttt
     1621 acactcgata aaaaataatc taaaaattga gaaagctgcc cattatttct tttcgccaca
     1681 ccataaacca attcagcagc agttacagat gaaatacaaa gcctctcagg attaatggac
     1741 ttcaatttcg ccaccacatt tgcatttcca cgaaaaaaat agcttacagt attcgtatct
     1801 aacatataca tttaagctac ctcaaaagga tcccgttgct caaaggattg gtttctctct
     1861 tttgtatcta aaaatgtttc atcacataca acagcaggca atagctcaaa caatcgttgc
     1921 caatgctcgg tatttctcga tctcaatgat aataaaatat cgccattttc ttttttagaa
     1981 acatagactt gctctgcatc aaactcaaat tcaaccggta aacgcactgc ttggttccgc
     2041 ccgttacgga ataatctcgc aattttttcc atcttacttt accctccgat agatagtgta
     2101 tatgccaaag tatatgccta ttttatacaa ctggcaagat aacccattct caaatactca
     2161 ataacatact gatttcaaat cataatatta ccaactaata gtcggtttac gtttctgctc
     2221 aacgcaatct ttcaaataaa gattgatcaa cgtttggtaa ggcaaattca cctcttcggc
     2281 aagttgttta aaatagctga taacatcgtc ttcaatccga atagtaacca cacttttgct
     2341 ttttagccct tttgcgtaag ggtttttcac tgcattagaa aaatcgtatt catctctcat
     2401 ttaatgtact cctttatatt gcccactttc gcgttttgtt gccaaacgtg ctgaaataat
     2461 ccgaatgttg gtatttctct cgcaatgcac aaccacaagt agattatctt tattgctacg
     2521 cccgagtagc aaaaaacgct cttccctaga tgagtgatct ggatccggga ttaacatcgc
     2581 attattatca taaaatacgc ttaccgcctc gataaaacta actccgtgtt tttgttgatt
     2641 acgaagagct ttctcactat cccattcaaa accattaatt tcttccattg ccagtttact
     2701 cctttttaat tgtaaataaa atatatttac atctattttt ttaagttata aacagcctag
     2761 atgaaattac tggattcgca ataaacaaaa acgattttta cgatacagat cgcaaaaatc
     2821 gtttttcaag attgacaacc ttaggaggct ttatccgccc acaacctccc ttagcaaatt
     2881 ttccacaaat tctaaccgct tgcggttgtc ttcgagtgct aagcggaatt tgaacttcac
     2941 cgccccttca aaactgtaca ccgctggttg tttttggatt aaggcgataa acttcattgg
     3001 gtcgggctgg gctgtcggtt taaattcaag ataaccgccg tgaatgccgg catcgatttt
     3061 cttaatcccg agcgtttgtg ccgacaagcg aagttgggtt atcgcaaaca ggtttttggt
     3121 tgcctctggg agcaagccga agcgatcgat cagctccact ttcaagtcgt tcaggctttg
     3181 cagattttcc gagcttgcga tccgcttgta gaacgacaga cgcatattca cgtcaggcag
     3241 ataatcgtcc ggcaataagg ccggtacacg caattcaatc tccgcttggt gttgggtgat
     3301 ttcatcgagg ctcggttctc gcccttcttg caaagctttg accgcatttt cgagcaagtc
     3361 catatagagc gaaaaaccga tgctttcaat ctgtccgctc tgctccgaac cgagcaattc
     3421 gcctgcacca cgaatttcta aatcgtgggt cgccaacgca aaaccggccc cgagattatc
     3481 aatggtactc atcgcctcca agcgttgctc ggcatctttg gtgagcgttt tcgggtgcgg
     3541 tgtgagcata taggcgtagg cttggtggtg cgagcgtccg acccgtccac gcagttggtg
     3601 cagttgtgcc agcccgaatt tgtccgcccg ttcgataata atggtattgg cagtcggcac
     3661 gtcaatcccc gtttcaataa tggtggagca aaccagcagg ttaaagcgtt gatgatagaa
     3721 atcgctcatc acccgctcca attcacgctc acgcatctgc ccgtgtccga tcacaattct
     3781 tgcctctggc acgagttcag ccaatttctc ggcacaattt tcaatggttg ccacatcgtt
     3841 atggaggtag taaacctgcc caccacgcag aatttcacgc aaaattgcct cacggattac
     3901 catttcatca ctttgtcgca caaaggtttt gattaaaagt cggcgagccg gcgggctggc
     3961 gataatcgag agatcacgca ttccgttgag tgccatattc agcgttcttg gaattggcgt
     4021 ggcggtgagg gtcagaatat ccacattggc acgcagttgt ttgattttct ctttttggcg
     4081 tacgccgaaa cggtgttctt catcaatcac taaaagccca agatcacgga acgctacatc
     4141 gtcttgcaac agtttgtgcg tgccgaccaa aatatccact ttgccctccg ccacattttg
     4201 caaaatcgtt ttctgctctt tggcggtttt aaagcgagac agcacttcca cattcacagg
     4261 gtaattggcg aaacggtctt tgaaattctc ataatgctgt tgggcgagca aggtagttgg
     4321 ggcaagaata accacctgtt tatggttcat cactgccaag aaagtcgctc gaatggccac
     4381 ttcggttttg ccgaagccga catcgccaca caccaatcta tccatcgctt tggcttggca
     4441 catatcgcta attacggcat tgatggcaat tttctgatcg tccgtttcct cataagggaa
     4501 agtggcacta aactgatcaa attccgcttt atcgtaggca aacgcaaaac cggtttggct
     4561 ttctcgtttg gcataaacat caagcaattc tgccgccaca tcacggattt tttccgctgc
     4621 tttttggcgg gttttcgccc acgcttcact gcctaattta tgtagcggcg cagtttcatc
     4681 cgccccaccg atataacggc tgattaaatg gagcgaggca accggcacat agagtttggc
     4741 atcgttagca taatgtagca cgagatattc ggctttgatc ccaccagcgt ccagcacggt
     4801 taagccaccg taacgcccca cgccgttttc caaatgcacc accgcctgtc cgattttgag
     4861 ttctgctaaa ttacggatta aggtatcagg attgacggct ttgcggtttt tctcacgccg
     4921 tgtttgcaca cgttcgccca gcaggtcggt ttcgcagatg atggcaaggt tgcgggcggg
     4981 cacaggaccc gcccctacgt agttattatc attttcgcca tttgtattta attcatcatc
     5041 gtagggacgg gtcccgtgcc cgcccgtttc caccacaaac ccttgatcaa gcggtgaaat
     5101 aatcagggaa aatggcaaac cttgtgcttc atctaatgaa ttgacctgct tcggcttcac
     5161 cccaagcgga gcaagcaaat ccagcaaggt ttctcttcgc ccttcgctct ccaccgaaaa
     5221 cagaatgttg ccgtcaaatt tttggcggaa ttgctggaaa gcagaaaacg gctctttggc
     5281 agaggattga atagcaatat ccggcaagtt agccacattt gcattcattt tcgctgctga
     5341 tttacggatt ttctccgaag ttatcgttaa acggggatag cctttcagcc agcgatttac
     5401 ctcatcaatc gcaaaccaga gatcactcgg cggcagtagc ggtcgcatcg gatccactcg
     5461 gtggctttca tagcggtttt gggtatcttg gtgaaattgt tcagcttttt gctgaatatc
     5521 ggcgaaagtg ataaacagcg tttgggcagg gaaatagtca aacagacttg ccatttcctc
     5581 aaaaaacaac ggctgccaat actcaatccc tgcatttaaa atgcctttgc tgacttgctg
     5641 ataaatatgc tccggctcac ggcggatttc accgaatttt tcacggaatt tggctctaaa
     5701 atgctcgatc ccgttgctat cagtcgggaa ctcgtgtgcc ggcagtaaat taatttcggc
     5761 aatttccgtt ttggtgcgtt ggttatccac atcaaaagtg cggatactgt cgatctcatc
     5821 atcgaaaaaa tcgaggcgaa acggctcttc tgctcccatc gggaataggt ctaaaatcga
     5881 gccacgcacg gcgtattcac catattccaa cacctgttcc accgcccgat agccggcatt
     5941 ttccagttgt aaccgcagtt tttgaatcga aaaacggtcg ccttttttaa tcaacagcac
     6001 attgttagcg agataattcg gcgggcagac cttctgcatt aaggtgttga tcggcaacag
     6061 caaaatctgc tgtcgccctt gttgcagttc aaacagggca gaaagtcggg cggagataat
     6121 gtcttggtgc ggcgaaaaat tgtcataagg caaggtttcc caatcgggga acagttgcac
     6181 tggcagccct gcaaactgag gcaaggcttt ttccaagcgt aacgccgtgc gggtgtcggg
     6241 tgtgacaacc accgtcaagc cgtaaaaggc tcgggcagct tggctgatcg caagggtatc
     6301 ggaatgcccg acaaggttac cgagggtttg atgatcttga aaattgccgt cagatttcgg
     6361 cagattaagt gaaattaaag acatacaagc ggtctgtttt aaataaaaaa ttgcaaattg
     6421 ttgcttagtt tactaaagca cggctgattg tgcaaaataa gcggagaaat tatgttatct
     6481 agatcgcatt gcgaaaaaat tctgataaaa tgttcccctt ttttaactct tactcacaca
     6541 tattatgaaa aataaaattt taggaagtgc attaatgatt gcaggcacta ccattggtgc
     6601 aggaatgctt gcaatgccac tcacctctgc aggaatgggt tttggggcaa ccgcattact
     6661 cttagtcgga ttatgggctt tattggccta caccggttta ttatttatgg aagtttatca
     6721 aaccgctccg caaaaagatg ttggagtggc aagccttgcc gagcaatact ttggcttaat
     6781 cgggcgtgta ttagccactt tcagtttgct cgtactactt tatgccctac ttgcggctta
     6841 tattaccggt ggtggttcac tgttagccgg tgtaatgcct gaaatggcag atgctgatat
     6901 gaaactgaaa atcagcattt taatcttcac tgcggtatta ggtacatttg tggtagtcgg
     6961 cgtgaaatcg gttgatggtt taacccgagt actgtttttg ggaaaaattg ttgcttttat
     7021 tgccgtgttg ctgatgatgc tgcctaaagc gaagctggaa aacttgacag caattccatt
     7081 agataactta ctcattattt ctgctatacc cattttcttc actgcgttcg gtttccacgt
     7141 tattatggga acaattaata gctatttaga cgcagatatc ggcaaaattc gtaaatctat
     7201 ttatatcggg acggcaattc cgctagtggc ttatttattg tggcagctcg ctacacacgg
     7261 ggtattaagc caaaatgaat tcaccacaat tttgacacaa gatccgacct taaacggctt
     7321 ggtgaaagcc actagccaga ttaccggtag tacgatttta ggcgaaatgg ttcgcttatt
     7381 ctcagtgctt gcattgatta cctcattttt aggggtttcg atgggaattt ttgaaggcgt
     7441 gggcgatttg ttaaaacgct taaatctacc gactaaccgt ttatggctga ccatcgccac
     7501 ctttacaccg ccaattctgt tcgctttatt ctatccgaac ggctttatta aggcattagg
     7561 ttacgccggt ttactctttg cgttctatgg tatgatttta cctatcggct tagcgtggaa
     7621 agcacgtcgc caatatccga atttacctta ccgtgtgatt ggtggtaatt tggcattagt
     7681 ggttgcgtta attgccggta ttatcattat ggtcattccg tttttaattc aggctggcta
     7741 tttaccgcaa gcggtaggct aatattgaaa agggctacga ttcaatatcg tagccctttc
     7801 tataagttac aagcggtcat ttttcgatga ctttttacag attagccaat caactgatac
     7861 agcgccttaa tttgatgctc ttttaatgcc ccgccaattt tctctctgcc gacaaaaatc
     7921 ttaaacattg cgttgccttt tttattaatg aaaatcagtg aaacagtacg ttttcccata
     7981 aaaggacgat ccaacaaata aattttggca caattttcgt agcgtagatg cccttgtaag
     8041 cctccgccct ctttatgttc gaaattgtaa aatccacgag aaattgaacc gcttgggagc
     8101 tttcccacaa actcaataat ggtatcttcc gtatgcgaaa tcagcgtaat cgcatcgtcc
     8161 cattcgtgga tttgctgtag cacttcggca aaacgttccc cttcggttac ttttagcatt
     8221 tcagccggta aattcagcat tacctcttcc agcgtgcatt gatattttgc cgctaacatt
     8281 tctaaaattt gccccggatt ttcggctaat tcattgcgta aggcggtttg ttgttcgatt
     8341 gatatcatta aatgttcctt taagtaaaga gagtttctta gctctctaag taaatttgta
     8401 aattagaaac ggtattcaaa attagccgag aagttacgtc caggttcata atagcgttgt
     8461 aatccaggat agccaccgta agttgcattt tcacgtactc caacagaatt aacgattcca
     8521 cctgttgtat ttaaaccacg taaagtatcc caagtatggt atttacggtt aaacaaatta
     8581 taaataccgg cacgtaatgt aatattctca gttggtttat agaaaccgta taaatccaca
     8641 acaaaggctt tagcatttaa gtgcttccag gtatctaaac ctgtctcgtg agaatattca
     8701 gtacaacgaa tgtcatattc atccccccaa taagggtaat acggatttgg cgttctatcc
     8761 tctttaaggc atttttccgg taatgttttt aaatattttg catctttcgc ctttttagcc
     8821 cccaagaatg tgaagcgaga aaatactccc catttacctt caggttgttc ataatctaag
     8881 ccaactacgg ctttaatcgg ctgaatagaa agtaaatctg ccccgttaga catactacct
     8941 ttgctgtaac cgaaggctcc aaatagcttc cagccttcag gtattggcat agctgaattt
     9001 aaattccatt taccactcac ttctagcccg tagattttcg cagaatcaat attttgcatt
     9061 tgctgtaccg ggcgccaaaa ctctctacca tatgcttggt aaacatccca ggtttcttgc
     9121 tcccataaaa aatctttata tttagtatgg tggaaattaa ctgagagcag cccaacattg
     9181 ccactacctt gcaaacttaa attttggctt aaactacgtt ccgcttttag gtttggattg
     9241 gacatccaag ctcctgcagc attatcacgg taatcaaaat acatttctga tgcatttgga
     9301 atacggaagc ctgtcccaat gttatatcct actttccatg cctcagtcag atgtttttct
     9361 aaaccggtaa cccaagttag ttgattaaat ttcgcattgt cagtttttac gcagttacga
     9421 caaacaagac cattgagttc ttgttgttca tacttcgccc aatcataacg aatgcctagc
     9481 gttgcaatcc aatcatgcgt taaatcaatc ttatcgtgca atgaaaaagt gtgctgtttc
     9541 gttttaattg ggtacatcat cgtagaatcg ggagaattta cccaaacacc ggataaataa
     9601 accgagtcct tatgtaatac atcgaaatct ctctctgcag tagaggcttt gaaagatagc
     9661 tgatgagtcc atttaccaaa ttctaatgct tggctgtcta aacggaaatt taagcgtttc
     9721 aattcagtat taaaaatacg aatattattg tcacttggtt ttctttgttt agcagggctc
     9781 cagtctgttg catcttcagc gcgtgtacct tcatagttat aagcagatgt ttcagtatct
     9841 tgataatctg catctatctt cgctagagat atccattttg actctgggaa atactcataa
     9901 aaaacattta ctgtatcacg tttactacgg tcttccgctt cacgccaaaa agaagtaata
     9961 gtaacggctg aatcttcgat aatataattt ttattatttt gcccactgta agaaacacca
    10021 acgcggtgat tatcattaaa tcgataagca aatttggcta aataattatg atgattatga
    10081 gtagaatcat caggagtttg tttactactg cgtaaagagc gagtttgtag agaatcttca
    10141 ggaagtgtat aacctcctgc acttttcatt tcatgcccat ggcgatttga ataaaccaat
    10201 atcgcctcag ctttctcacc taaatatcca acaccgaatg tattcaacca ttcattatta
    10261 cgagtaccat atcctgtgcg ataaaaagca ccaaatttat taccgttacg aacaatatca
    10321 taaggctcaa gcgtccgata attaactccg ccgcctaaat taccactacc ttgattgaaa
    10381 gaatctgcac ctttagatac ttcaatagta cgagctaatt ccggatctat agattggcga
    10441 gatgtattta aattaccata gcgtttataa agggaatttt cttctgaatc aggaaaagcg
    10501 agacaccatc aatacttatt cctacacggt tgtcttccac tccacgaata gcaaatcctt
    10561 tttgatgtct accttggtta acaatgccaa catcagggct ataacgaact aaatctcgat
    10621 tattttgaat caactcttgc tgaattatct ctttattttt cttttctata gaagccttca
    10681 catcttcttt agcaacaaca tttacttcag ataattccgc tgttgtttct tccgcatagg
    10741 tagcttgtga agacaaaatg ctactaacgc ttaaagccaa tatagtcggg cacaattttt
    10801 tagactttat tgaataagag gtaaacacca tgattctccc tagatagatt tttaatatac
    10861 tttattatta ataagatgta ttatcagtta catcacattt atagtcaata atgattctca
    10921 tatggattga aagttttcac tctttatagt aatctaaaaa aacactattt aaattgaggt
    10981 attttatgac aaccaaccgt caagaggtct tacaaaaccg tttaggtcca gaaattgaag
    11041 aattaaaaca acaaatcaaa actataatgc ttgcaaccat agataaagat ggtgtaccga
    11101 atgtgagcta tgcccctttt gtaattaata acggcgaata tcaagtctta atcactacta
    11161 ttgcccgtca cgctcgtaat ttacaagagg tgccaaaagt ctctttaatg ctaattgagg
    11221 atgaaagtaa gagccgtcaa atttttgccc gtcgtcgctt aacctttgac gcaacagtgc
    11281 gaatgattga acgtactgat gaggaatgga ataatagcat tgcagcactt aaagctcgtc
    11341 acggcgattt agttgatgaa ctgtcaaata tgcaagattt caagctcttt agctttaagc
    11401 caacggcagg cttatttgta aaaggatttg gtaaagcctt tgatgttggt gttgatgact
    11461 taattaatgt cgttcattta gaccaaggcc accaaactgc ctaattgcga aataaactca
    11521 cggctataaa taatcctatt tatagccgtt tttattgcga caagcggtca aattttttgg
    11581 aaaatttacc gctattttag tacaataacg acactattct atgagctaaa cgcaactaaa
    11641 aaaaggaaat cctatgcaac ctaaagcgaa actcagaaaa gattatcgag ctcccgattt
    11701 cactattact gatatttatc ttgacttcca acttgaccca gatcgcactt ttgtcacctc
    11761 aaaactaact gtcgtgcgta aaaatcctga ggcgacaaca cttcgtttag acggtcatag
    11821 tttcgatttc ctttcgctta aatataacgg cgagccgttt tccgcctttc aaaaagatga
    11881 tgaatcttta accttaaatt tagccgatgt gcctgccgag cggttcgagc ttgaaattga
    11941 aaccgcatta aatccggcac aaaacacctc gttacaaggt ttgtataaat cgggcgacgg
    12001 gttttgcacc cagtgtgagg ctgaaggttt ccgccagatt acctatatgc tcgaccgccc
    12061 tgatgtactt gcaaaatata cgacaaaaat caccgctagt aagagcaaat acccgtatct
    12121 gctttctaac ggcaaccaca ttgcccaagg cgacttgcac gatggcagac actgggtgga
    12181 atggcaagat ccgttcttta aaccaagcta tttatttgcc ttggttgcgg gggattttga
    12241 cttactccaa gataaattca tcaccaaaag cggacgtgaa gtcacgcttg aaatttatgt
    12301 cgatcgtgga aatttagacc gtgcaccttg ggcgatggag agcttaaaac gttcaatgaa
    12361 atgggatgaa gagcgtttcg gtttggaata cgatttagat atttatatga ttgttgccgt
    12421 tgatttcttc aatatgggag caatggaaaa caaagggtta aatattttca attccaaatt
    12481 tgtattggca aaaccggaaa ccgcaaccga tacggattat ttagatattg aagcggtgat
    12541 tgcccacgaa tacttccata attggacggg caaccgcatt acctgccgtg attggttcca
    12601 actaagctta aaagagggct taaccgtctt ccgtgatcag gaatttacct ccgatttatg
    12661 gtctcgttcg gcaaaacgga ttgaagatgt gcgtttactg cgtaccgtac aatttgccga
    12721 agatgccagc ccgatggctc acccgattcg cccggaaaaa gtgattgaaa tgaataattt
    12781 ctacaccgtg actgtgtatg aaaaaggggc ggaaattatt cgtatgattc acaccctgtt
    12841 aggcgaagaa aaattccagc aaggtatgca actttatgtg gcaagacacg atggttctgc
    12901 ggcaacttgt gaagatttcg ttaaagcaat ggaagatgct tcaggcgtta atcttgaaca
    12961 attccgccgt tggtatagcc aatccggcac gcctgagctc accatttccg atgaatatga
    13021 tgaaacccgc aaggcatacc gcttgcatat ttcacaaatg acaccggcaa cccacgatca
    13081 gatggataaa ctcaatctgc atattccgct taaagtagcg ttatatggtg aacaggacgg
    13141 taaacgcatt ccgttacaat atgaattatt gaccgtaagc gatgtgttag atgtaaccgc
    13201 agaacaccaa acctttgagt ttcataatgt aacacaacgc ccggtgcctg cattactgtg
    13261 tgatttctct gcaccggtac ggttagatta caactatacc accgagcagc ttttaacctt
    13321 actcaaacac gctgaaaatg attttgtacg ctgggatgca gctcaaatgc tctataccaa
    13381 tgaactgcgt gaaaatttaa gccgttatca gcaacatcaa ccactcagct tctcagaagg
    13441 gttggtgaat gccctaacgt tcgtgttgga taactcagca agcctgccgg aactaactgc
    13501 attaaccctc acattgccaa aagaaaccga gtttgcagaa tcgttcaaaa ccattgaccc
    13561 acaaggtatt gcggttgtgc gtgaatttat gcagcattcc attgctcacg ccttgcaaga
    13621 taagttatta gcggtatatc accaaaacca atgcggggaa tatcaagtcg tggctgaaga
    13681 tattgctaaa cgagccttgc gtaatgcttg cttaagctat ttagccttta ctgatttagg
    13741 caacgcgttg gtgcataagc attacaataa tgccgataat atgactgata cgcttgctgc
    13801 attacaagcc gcaaccaaag cccagctaag ttgccgtgat gcattattag ccgattttga
    13861 gcaaaaatgg aaacatgatg gtttagtgat ggataaatgg tttatgctac aagccacccg
    13921 accggacgac gatgtgttat ccatcgtgca aaatttaatg gaacacccaa gttttaactt
    13981 taataacccg aaccgtttac gttcattagt aggtgcattc tgcggtcaaa acccgaaagc
    14041 cttccacgcc attgacggtt caggctatcg tttcttggta gatacgctga ttaaacttaa
    14101 cgaaagtaac ccacaagttg ctgctcgact tattgagccg ttaattaaac tctcacgcta
    14161 cgataaccaa cgccaaacct tgatgcgtcg tggtctagaa cgcctgcgtg agctggataa
    14221 tttagcacga gatctgtttg agaaaattga aaaagcgtta gattaaacca agcaatacaa
    14281 gcggtgtcgt ttgcaaattt ttttacaaat gacaccgctt gttagttaat accttacctc
    14341 aaacctttta aacctttctg agccaagata atcgctcaca attacccgtt ccacctttgc
    14401 agcaggtgag ccttgttgta accaattttc cagttgagcg attgtctgtt catccgcttc
    14461 agctaccact tctaccgagc cgtcatcacg atttctgaca tagcctttta tgcctaatcg
    14521 attcgcttcc tgcaaggtaa aaaaccgaaa agcgacacct tgaacccgtc cgtaaaccga
    14581 gaataatttt gcgaccattc ttcccccata aaaataggct gcttattttt caataaacag
    14641 cccataatgt cttatttcac gatgtagagg ttacgcagta aaatatcatc ttgcggatct
    14701 ttaccctcat agcctttcac gtaaggtttc accaaacgtg ggtttacata gttataaatc
    14761 ggaataatcg cataatcttt ggctaactgc tcctctgctt ttgcataagc agctgcacga
    14821 ccagctgcgt ctgtcgcttt gtaagattct gctaccgcat catcataagc ttggctctta
    14881 taaaacgcag tattgttgct ggagttcgat aagaaatagt tcacaaaggt ggttgcttgg
    14941 ttatagtctg ccgaccaacc tgcacgagaa acatcataat ttgcattgcg gcgggtatct
    15001 aagaatgttt tccactcttg gttttctaat ttcacatcaa caatgccgtc tgtgccttgt
    15061 ttccataatg atgaaactgc aatcgcaatt ttcttgtggt tgtcgttggt attataaaga
    15121 atagtaaatt ttaacgggtt cgctttactg taaccggctt cttccaataa tttcaacgct
    15181 ttggcttttc tatctgccat tgaatctttg gaataagcag gttgctggat tttttcaccc
    15241 tcgtgaatat aaggcggtgt aaatacataa gttggtgttt gaccttgtcc tagcacttta
    15301 tcggtaataa tggtgcgatc taaagctaag tttaacgcct cacgcacttt cacattatca
    15361 aacggtgctc gtttatggtt aatttcatag taataagtag aaagggttct tgccgtaaac
    15421 acttcgtttg gaatctcttt tttcaaggtt gcaaactgct ccggtggaag agcatagttg
    15481 gtcatatcca aatcaccggc acggtaacgt gaaacatcag ttgcggcatt agcaatggct
    15541 aagaaagtcg ctttattaat cacggtttct ttatcattcc aataattttt attacgctca
    15601 aacacgattt tttcattaat aacgtgatcg gctaaggtat aagccccgtt tccaaccaga
    15661 ttgccttttt gcacccacgc atcgccgtgt ttctcaacgg ttgctttgtg tacaggtaat
    15721 aaagaagagt gtgttgccag ctcaactgca tacgggacag gttggcttaa ctgcacctgg
    15781 aaagtatgat catcaatcgc tttaactgct agttcctccg gttttttctt gccgtcaata
    15841 atatcttgag cattttctac attgagataa gttaaatagc ttgaataagg tgaagccgta
    15901 agtggattaa ccaaacgctg ccaagcaaat acgaaatcgt gagcagttac ggcatcaccg
    15961 tttgaccatt tagcgtcttg gcgtaatttg aacgtccacg ttttgtaatc cggtgtattt
    16021 tcccaacttt ctgccacacc cggctgaata ttgccgtcag aatctttcgt taccaatcct
    16081 tcaaataact gataagcaac ttgcgattcc ggcacgccct caattttatg tggatcaaaa
    16141 cttgatggct caaaaccatt attaatcgta atttcttgtt tttctgcaag cgttgttcct
    16201 tcaggcactt tggctgcaaa cacatttgcc gataagccta acactaatga ggttgttaat
    16261 aaggaaagcg agaattttga ctgcatattt gatctccatt gatgaatatt ggcttgcaac
    16321 cagccgattt gttctaatta atttttttaa gtctaggcat tattattttg attgcaagga
    16381 atttttttaa aaaatgtgat agatatcacc tttcaatgca aaaattgcat aaaaaaatcc
    16441 cgaagaaaat agctctataa actctgataa tggctagata acttgctgta a
//
LOCUS       DANMCL010000064        16433 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.064, whole genome shotgun sequence.
ACCESSION   DANMCL010000064 DANMCL010000000
VERSION     DANMCL010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16433)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16433)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16433
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.064"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            422..1003
                     /gene="rsxA"
                     /locus_tag="PXF40_001817"
     CDS             422..1003
                     /gene="rsxA"
                     /locus_tag="PXF40_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HDL5803138.1"
                     /translation="MVDYILLVISTALINNFVLVKFLGLCPFMGVSKKVETAIGMGLA
                     TTFVLTVASLSAYLMETYLLEPLNAQFLRTLVFILVIAVIVQLTEMIVHKTSPTLYRL
                     LGIYLPLITTNCAVLGVALLNVNLANNLVESVLYGFGAAAGFSLVLVLFAALRERLAA
                     ADVPRPFQGASIALITAGLMSLAFMGFTGLVKL"
     gene            1003..1620
                     /gene="rsxB"
                     /locus_tag="PXF40_001818"
     CDS             1003..1620
                     /gene="rsxB"
                     /locus_tag="PXF40_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HDL5803139.1"
                     /translation="MLDLPIIAYILIAIAVIALIFGAVLGYSSIKLKVESDPIVDQID
                     ALLPQSQCGQCGYPGCKPYAEAIANGDVITKCVPGGQPLVVNLAELLGVEVPPMEGMA
                     EPEMKVAFVIEDLCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTNC
                     IEMRPIKPTTQSWNWKFDQDLIIPIVNTTELQRKLVTGGGKNEQS"
     gene            1607..3901
                     /gene="rsxC"
                     /locus_tag="PXF40_001819"
     CDS             1607..3901
                     /gene="rsxC"
                     /locus_tag="PXF40_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HDL5803140.1"
                     /translation="MSNPNLVIERIRQNKETGKLWDFPGGIHPMENKSQSNSKPIRTL
                     NLPKFFYVPLVQHSGWAGELLVKVGDVVLKGQPLTKGDHFRQLPVHSPTSGRVIGIEP
                     YVSAHASGLPEITVIIETDGKDKWVERQPIEDFLSLTSDQIIQKVYQYGIAGLGGAVF
                     PTATKLSLADKRCKLLVINGAECEPYITCDDRLMQDFTADLIEGIRILRYVLRPEEVV
                     IAIEDNKPHAIQALETALKGSNDMFVRAIPTKYPSGASDQLIQVLTGLEIPAGKRTIE
                     MGIVMHNVGTAFAVKRAIIDDEPLIERVVTLTGDKIRNKGNVWARLGTPIQHLLEQVD
                     YQADKRFPVFLGGPMMGFILPALQAPITKTANCLIAPDHFEYAPPEPERSCIRCSSCS
                     DACPVGLLPQQLYWFARAEDHDKSKEYHLDACIECGVCAYVCPSYIPLIQYFRQEKAK
                     IEEIEEKARKAEEAKIRFEAREARLQKERDARTARISQAAEKRREEVANAGGVDPVKA
                     ALERLKAKKAVETVQEIPAEVQVKPNGEPDNSDLMAQRRARRLAKQAEQAVEKSENVT
                     NALIGANNDLPLQSMNETASDKSVGANNYSPEAESEDPRKAAVAAALARAKAKKQAQQ
                     AVEKSENITNAVIGVNNDLPLQSMNETVSDKSVGANNHSPETESEDPRKAAVAAAIAR
                     AKAKKQAQQAVEKPEDIANAVIGVNNDLPLQSMNETTSDKSVGANNHSPKTESEDPRK
                     AAVAAAIARAKAKKAAQQEKSNNV"
     gene            3894..4529
                     /locus_tag="PXF40_001820"
     CDS             3894..4529
                     /locus_tag="PXF40_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HDL5803141.1"
                     /translation="MFSELIPALPWSFLFIQDLIGTIVFAISGAIAARQHKMDIFGMF
                     ILAFVTGVGGGTLRDMMIGSTPVFWMKQPIYVLMITLAVVITAIFRNQISRKSWQTGL
                     LVFDAIGLGVFTVIGVQKGLDFGLHPLICVALGGVTGCFGGLIRDILRNEVPIILQKE
                     VYVTASLIGGVIFVAANSVGLESDWVYLATVFTVIIIRLLAIRFNLNLPRL"
     gene            4575..5630
                     /gene="rsxD"
                     /locus_tag="PXF40_001821"
     CDS             4575..5630
                     /gene="rsxD"
                     /locus_tag="PXF40_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HDL5803142.1"
                     /translation="MFKMVSSPHTHSSNLTANFMLWVIAMMLPAFGVQLYYFGYGVLI
                     QTLLAVSLAIVIEIGIAKLRKKTTAFYLADLSGILTALILAMSIPPYAPYWLVLIGVI
                     VALLLAKHSYGGLGQNLFNPAMVGYALLLVSFPVQMTAWIVPIELLSEPPTFRDAISL
                     IFYGVTSDGFSIHQLVNSVDGIAQATPLDSMKSSLAKSGFDAVMNTPIFNGLFATGWL
                     QLNLAFLFGGLVLIYKRIIHWQIPVAMLATFAFFSGFTELFSQQSHLHFVSHFFSGAM
                     MFGAFFIATDPVTASITPRGKLIFGGLVGLLVYLIRYYGNYPDAIAFSVLLANICVPL
                     IDHYTQPRLYGTKLDNR"
     gene            5630..6262
                     /gene="rsxG"
                     /locus_tag="PXF40_001822"
     CDS             5630..6262
                     /gene="rsxG"
                     /locus_tag="PXF40_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HDL5803143.1"
                     /translation="MNTSKITLNYALILGFIALLCTAVSTGVYLLTKGKIDDVTAMQQ
                     RKLLEEVVPKSHFDNDVLATCKLVQLENAPYLNRIYVAKKSENLTAYLVQGTAPDGYS
                     GDIVLLMGIEPNGNILGVRTLEHKETPGLGDKIETRVSDWILSFTNQLFSLENEADWN
                     VKKDGGKFDQFTGATITPRAVVNHIRQSAKWVVTELAQNPTMFNQFKACK"
     gene            6271..6954
                     /locus_tag="PXF40_001823"
     CDS             6271..6954
                     /locus_tag="PXF40_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005624031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HDL5803144.1"
                     /translation="MEREQQIPVTNIDVAPKQSSVWKTIFADGVWKNNGALVQLLGLC
                     PLLAVSNSVTNALGLGLATMFVLICTNITVSLFRKITPHDIRIPIYVMVIATVVTAVQ
                     LLMNAFAFPVYQSLGIFIPLIVTNCIVIGRAEAYASKNEVKFSAFDGFSMGLGMTFSL
                     VVLGALREIIGNGTLFSGLDLLLGDWAKALRIDVLHIDSGLLLAILPPGAFIGLGVIL
                     AVKNIIDKR"
     gene            7395..8345
                     /gene="lpxM"
                     /locus_tag="PXF40_001824"
                     /gene_synonym="msbB"
     CDS             7395..8345
                     /gene="lpxM"
                     /locus_tag="PXF40_001824"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249087.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HDL5803145.1"
                     /translation="MTRITAQDGYTHKFLWSFLHPKYWGVWLGVLGLVILAYVPVRIR
                     DKLSAFVGKMAYRYLKQKNKKGYHRAKVNLRYCFPDWSEKKREEVVEKMFITVAQTML
                     AIGETAIRPASYLQKRCEFTGFENVVKAKESGKNVIMLVPHTWSIDMAGVAMFSLGYP
                     MTSMYNPHRNALVDWLWNITRERLGGRMHTRQNGIKAFLADVRKGDVGYFLPDEDFGE
                     ELSVYADFFATEKATLPGLNKMARVANAEVIPMFSIYNAEKAKYEMEILPPLEFSGDP
                     IQSAREMNRVIEYFVEKNPEQYVWILRLLKTRRNREDIYL"
     gene            8473..9012
                     /gene="apt"
                     /locus_tag="PXF40_001825"
     CDS             8473..9012
                     /gene="apt"
                     /locus_tag="PXF40_001825"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HDL5803146.1"
                     /translation="MNQLDLIKSSIKSIPDYPKAGIIFRDITSLLEVPTAFQATIDAI
                     VAEFKDKGITKIVGTESRGFIFGAPVALALGVPFVLVRKPKKLPREVISQSYTLEYGE
                     DTLEIHKDAVSANDNVLVIDDLLATGGTIDATAKLIRRLGGNVEHAAFVIWLPELGGK
                     ERLEKEGVKSFSLVSFEGH"
     gene            9103..11160
                     /gene="dnaX"
                     /locus_tag="PXF40_001826"
     CDS             9103..11160
                     /gene="dnaX"
                     /locus_tag="PXF40_001826"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HDL5803147.1"
                     /translation="MSYQVLARKWRPQRFSEVVGQQHVLSALENSLREDRLHHAYLFS
                     GTRGVGKTSIARLFAKGLNCVNGITAEPCGECANCKAIEEGHFIDLIEIDAASRTKVE
                     DTRELLDNVQYKPTVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQ
                     KLPITILSRCMQFHLRALEQSQIARHLEFILNAENIPFEPLALEKLAKAAQGSIRDSL
                     SLTDQAIAMSNANITLAIVSQMLGLIDDNQPLELVQATAQADGEKAMAIIEQIAAKGV
                     DWQQLLSDVAEVLHKIAMLQLVKTPTTEETLVHFLAKQIPPEDVQFFYQLILNSKKEL
                     PFAPEQRAGVEMAILRALAFHPKQAEKIATVAVEKVTQPNHSVSAVTTAKPQNQISQL
                     RENFEQNQQKTVTVANTTTAVESIAQPPQAVDTAISPSAPATLSPAMAALEARKKLQA
                     QQANLAQTEKKKPELKAPQVIAKKSANQTASLQERFISLAENQHKAVLQVSKKTESAP
                     KSVEDEDYRWTWLNPELENQADSAKPSDIKQAILQERTPELVAKTIHLSCQQDKWCDI
                     ANSLNLGGFSRQIALNSYLAEQNEQHLALVLKPNMAHLDNPESRKNLEAALAEKGYSY
                     ELTIGDNSEQQTPLEIRRAIFKQLTEAAKSALLNDEKLMLLRNAFDAQIDESTIRAVA
                     ETE"
     gene            11166..12074
                     /locus_tag="PXF40_001827"
     CDS             11166..12074
                     /locus_tag="PXF40_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803148.1"
                     /translation="MKALELIDLVKTYPTGVKAVKGINLVVEQGDFYALLGHNGAGKS
                     TTIGIISSLVNKTSGSVKVFGYDLDTQKVELKHQIGLVPQEFNFNQFEKVIDVLVQQA
                     GFYGIPRSEALVRAEKWLKLLDLWEKRTHLTRELSGGMKRRVMIARALMHNPKLLILD
                     EPTAGVDIELRRSLWDFLRDLNNQGTTIILTTHYLEEAETLCRHIGIIQHGELIENTS
                     MKALLAKLESEVFVLDLQNSEQNQPLVIQNYPHKWLDENTLEVNVKRQQGLTNLFSQI
                     SAQGAEVLSMRNKSNRLEELFINMAQ"
     gene            12076..12837
                     /locus_tag="PXF40_001828"
     CDS             12076..12837
                     /locus_tag="PXF40_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803149.1"
                     /translation="MNLIGFYTLAYKECRRILRIWRQTLVPPVITTTLYFLIFGTLIG
                     GRIGEMNGVGYTQFIAPGLIMMTAITASYVNTASSFFLSKFTRDFEEMLISPLSTHNI
                     IWGYVTGSILRAGLAATLVMCVAMVFVSFEIYSVAIIVLTLLLTIIAFALGGVINAVF
                     ARSFDDVGLIPTFVLTPLTYLGGVFYSISLLPEFWQTVSKFNPIVYMINGLRYGFLGI
                     SDVPLGYTFAVLTSLCIGLYIIAYSLIQRGVGLRS"
     gene            12858..13613
                     /gene="modA"
                     /locus_tag="PXF40_001829"
     CDS             12858..13613
                     /gene="modA"
                     /locus_tag="PXF40_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HDL5803150.1"
                     /translation="MKALKKLAITMALTLSGTAFSQEITVFAAASMTNVLQDIQQDFE
                     KAYPQDKITFSFASSSVLAKQIEQDAPADIFISADQKWMDYVAEKQPEKVKHRRNLVR
                     NELVLIAPTESNIEPKAIQAVDFAKELANSYLSVGDPNHVPAGKYAKKALSHYQLWES
                     VEPRLARAKNVRDALSFVERGESPLGIVYSTDAKVSNKVKVVAVFPPESYGEIVYPAA
                     AVSEKASAATFLDFLKTPKAKAKFEAAGFYPVN"
     gene            13797..14489
                     /gene="modB"
                     /locus_tag="PXF40_001830"
     CDS             13797..14489
                     /gene="modB"
                     /locus_tag="PXF40_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HDL5803151.1"
                     /translation="MLNFTPQELNAIVLSLKVASIAVVLALPLAVWVAWLLARKQFWG
                     KNLLNGIMHLPLVLPPVVIGYLLLISMAKRGVIGQYLWEWFHFSLSFSWKGAVLASMV
                     MAFPLMVRSIRLAFEAVDPKLEQAARTLGAIPLKVFFTLTLPLSFSGIIAGGVLGFAR
                     SLGEFGATITFVSNIPNQTQTIPAALFTFIETPDGEMAAARLCLVAILISLIALFCSE
                     WLAERQKRYAQT"
     gene            14476..15531
                     /gene="modC"
                     /locus_tag="PXF40_001831"
     CDS             14476..15531
                     /gene="modC"
                     /locus_tag="PXF40_001831"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HDL5803152.1"
                     /translation="MLKLKLLQQLGNLTLNVNLDLPNKGITAIFGRSGAGKSSLINLI
                     AGLSTAQAGFIELNGQVLFDSQNGINLPPEKRNIGYVFQEHRLFPHYSVEKNLKYGYK
                     RSDSADFLQIVELLGIAPLLNRYPASLSGGEKQRVAIGRALLSSPNILLMDEPLSALD
                     LPRKQELLDYLDKLSARLEIPILYVSHSLEEVVRLADHLVLLENGKVTAFDTLSAVWH
                     SSAFSAWQPNHQRISLLELPVEETLPHYNMLGLSLNAQRLWVNQLPRHQIGEKLRVTI
                     ASKEVSISLQKPTQSSIRNVLKGNVRKIETHLDRVDLAIQVENQQIWSTISLWSFNEL
                     AIQPEQEVYLQIKSVSL"
     gene            15586..16020
                     /locus_tag="PXF40_001832"
     CDS             15586..16020
                     /locus_tag="PXF40_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HDL5803153.1"
                     /translation="MPIVNQSALVPYSAEQMYQLVNQYEKYPEFLSGCVSTKTLSTGE
                     NELKAELHIQKLGISQTFSTHNKMTPPYKIEMALIEGPFRHLHGAWTFTPFDEQSCKI
                     ALQLNFEFSSPIVAMVFGKVFNELTLKMVNAFKQRAKEVYGV"
     gene            16010..16345
                     /locus_tag="PXF40_001833"
     CDS             16010..16345
                     /locus_tag="PXF40_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HDL5803154.1"
                     /translation="MVSEQRQNPEEQKSEEQKINVEVLYAYPDKYFLKKLQVPQNATI
                     QTIILLSGVLEKYTEIDLRENKVGIFSRPAKLNETVEEGDRIEIYRPLIADPKEIRRK
                     RAAEQAEKK"
BASE COUNT         4635 a         3436 c         3749 g         4613 t
ORIGIN      
        1 ctgaagaaga ggtaaaactc cctttatgga aaaagattta ttatgttttc attatatttg
       61 ggattattat gtttatttat cgagtaatta attggttgtt attctaatat cctctatatc
      121 aaaggagtga gactttttag gattaactta gaaaatcaag ctcctttcac ctttcatgct
      181 gtatagctta gtccccacat tctccattct accagagata gaaacaaagg taacaagatc
      241 atatttgata tggtatgttt actagaagta cctccgattt cttattgtga atgagccgaa
      301 aacaagagat aatataacgt ttatttttaa tgagatgctt taacaaacgg tcagattttc
      361 tctgtttttt gcaaaataaa atgcgttttt gaccgcttgt atatttaatt ttgtggaatt
      421 tatggtcgat tatattctgt tggtcatcag caccgccctt attaataact ttgtcttagt
      481 taaatttcta gggctttgtc cgtttatggg agtgtcgaaa aaggtggaaa ctgctattgg
      541 tatggggttg gcgacaacct ttgtgctgac ggttgcctcg ctctctgctt atttgatgga
      601 aacctatttg cttgagccgt taaacgctca atttttgcgt accttggtgt ttattttagt
      661 gattgcggtg atcgtgcaat taacggaaat gattgtgcat aaaaccagcc cgacacttta
      721 tcgcttgctt gggatctatt taccgctgat taccaccaac tgtgccgtat taggggtggc
      781 attattaaac gtgaatttag ccaataactt ggtggaatct gttctttatg gttttggagc
      841 cgctgccggt ttctcgctgg tgttagtttt atttgcggct ctgcgtgagc gtttggctgc
      901 cgctgatgtg cctcgtccgt tccaaggagc atcaattgct ctgattaccg caggcttgat
      961 gtcgcttgcc tttatgggct ttacaggatt ggtgaaactc taatgcttga tttgccaatt
     1021 atcgcttata ttcttatcgc tattgctgtg atcgcactga ttttcggggc ggttttaggc
     1081 tattcctcga ttaaactgaa agttgaatcc gacccgattg tcgatcaaat tgatgccctt
     1141 ttaccacaaa gccaatgcgg tcaatgtggc tacccgggct gtaagcctta tgctgaggcg
     1201 attgctaatg gtgatgtgat cactaaatgt gtgccgggtg gacaaccttt agtggtgaat
     1261 cttgccgaat tgcttggggt agaagtgccg ccaatggaag gtatggcaga gcctgagatg
     1321 aaagtggctt ttgtgattga agatctctgc attggctgta ctaagtgcat tcaggcttgc
     1381 ccggttgatg cgattatcgg cacgaataaa gcaatgcaca ccattattcc ggatctttgc
     1441 accggctgtg aactttgtgt cgccccttgc ccgaccaact gtattgaaat gcgaccaatt
     1501 aaaccgacaa cccaatcttg gaactggaaa tttgaccaag atttaattat tccgattgtg
     1561 aataccactg aattgcagag aaaattagtt accggcggag gcaaaaatga gcaatcctaa
     1621 tttagtgatt gagcgaatcc gccaaaataa agaaacgggt aaactgtggg atttcccggg
     1681 cggtattcac ccgatggaaa ataaatccca atcaaacagc aagccaattc gcaccttaaa
     1741 tttaccgaag tttttctatg tgccactggt tcaacattct ggctgggcag gggaattatt
     1801 agtcaaagtc ggcgatgtgg tattgaaagg gcagccgctc acgaaaggcg atcacttccg
     1861 tcaactgccc gtacacagcc caacctccgg gcgggtgatt gggattgagc cttatgtttc
     1921 cgctcacgcc tcaggtttgc ccgaaataac ggtgattatt gaaaccgatg gtaaagataa
     1981 atgggtggaa cgccagccga ttgaggattt tttaagccta acaagcgatc aaattatcca
     2041 aaaagtttac caatatggca ttgccggttt aggcggtgcg gtattcccaa ccgcaacaaa
     2101 attaagtttg gcggataaac gctgtaaatt actggtgatt aacggggcag aatgtgagcc
     2161 ttacatcacc tgtgacgatc gcttaatgca agatttcact gcggatctta tcgaaggtat
     2221 tcgcattctg cgttatgtgc ttcgcccgga agaagtggtg attgcgattg aagacaacaa
     2281 accgcacgct attcaagctt tagaaaccgc tttaaaaggc tcgaacgata tgtttgtgcg
     2341 ggcgatcccg actaaatatc cctccggagc ttctgatcag ctgattcaag tgttgaccgg
     2401 acttgagatt ccggctggca aacgcactat tgaaatgggc attgtgatgc acaatgtcgg
     2461 cacggcgttt gcggttaaac gggcaattat tgatgatgaa cctttgattg aacgggtagt
     2521 gacgctgaca ggcgataaaa ttcgcaacaa ggggaacgtg tgggcaagat taggcacgcc
     2581 aattcagcac ttgttggagc aggtagatta tcaagccgat aaacgctttc cggtgttttt
     2641 aggcggaccg atgatgggct ttattttgcc tgcattgcaa gccccgatta ccaaaactgc
     2701 gaactgcttg attgcccctg atcattttga atatgcacca cctgaaccgg agcgtagttg
     2761 tatccgctgt tcaagctgtt ccgatgcttg cccggtgggg ttattgccac agcaacttta
     2821 ttggtttgcc cgtgcagaag atcacgataa atcgaaagaa taccatttag atgcctgcat
     2881 tgagtgtggc gtttgtgctt acgtttgccc aagctacatt ccgttaatcc aatatttccg
     2941 ccaagaaaaa gcaaaaatcg aggaaattga ggaaaaagcc cgcaaagcgg aagaggctaa
     3001 aatccgcttt gaggcgagag aagctcgctt acaaaaagaa cgagatgcca gaactgctcg
     3061 cattagccaa gcggcggaaa aacgccgtga agaagtggca aatgcaggtg gtgttgatcc
     3121 tgtaaaagcg gctcttgaac gcctgaaagc gaaaaaagcg gttgaaacag tccaagaaat
     3181 accggcagaa gtacaggtaa aacctaacgg cgagcctgat aacagcgatt taatggcaca
     3241 acgcagagcc agacgtttag ccaaacaggc agaacaagcg gtcgaaaaat cggaaaatgt
     3301 tacaaatgcc ttgattgggg caaataatga tttgcctcta caatcaatga acgaaactgc
     3361 atcggataaa tctgtagggg cgaataacta ttcgcccgaa gcagaaagcg aagacccacg
     3421 caaagccgcc gttgcggctg cccttgcccg agccaaagcc aaaaaacagg cacagcaagc
     3481 ggtcgaaaaa tcagaaaata ttaccaatgc cgtgattggg gtaaataatg atttgcccct
     3541 acaatcaatg aacgaaacgg tatcggataa atctgtaggg gcgaataacc attcgcccga
     3601 aacagaaagc gaagacccac gcaaagccgc cgttgcagca gctatcgcta gagctaaagc
     3661 gaaaaaacaa gctcaacaag cggtcgaaaa accggaagat attgccaatg ctgtgattgg
     3721 ggtaaataat gatttgcccc tacaatcaat gaacgaaact acatcggata aatctgtagg
     3781 ggcgaataac cattcgccca aaacggaaag cgaagaccca cgcaaagccg ccgttgcggc
     3841 cgccatcgcc agagctaaag cgaaaaaagc cgctcagcag gagaaaagca acaatgttta
     3901 gcgagctaat tccggcattg ccgtggtcgt tcctgtttat tcaggactta atcggcacta
     3961 tcgtgtttgc gatttcgggg gcaattgctg cccgccagca caaaatggac attttcggta
     4021 tgtttatttt agcgtttgtg accggggtcg ggggcggtac gctaagggat atgatgattg
     4081 gctccacgcc ggtgttttgg atgaaacaac cgatctatgt gctgatgatt acccttgcag
     4141 tggtgattac cgctattttc cgcaaccaaa tttcccgcaa aagttggcaa accggcttgc
     4201 tggtgtttga tgccatcggg cttggcgtat ttaccgtgat tggcgtgcaa aaaggcttgg
     4261 atttcggctt gcacccactg atctgtgtgg ctctgggcgg tgtgacaggc tgttttggtg
     4321 gcttaatccg tgatatttta cgcaacgaag tgccgatcat tttgcaaaaa gaagtgtatg
     4381 tgaccgccag ccttatcggt ggtgtgattt ttgtggctgc aaactcagtt gggctcgaaa
     4441 gcgattgggt ttaccttgcc accgtgttca ccgtaattat tatccgcctg ctggcaatac
     4501 gctttaattt gaatttgccg agactttaat aagcggtcat ttttttgcaa ttttttacta
     4561 aaaaggtttt atagatgttt aaaatggtca gttcccccca cactcattcg agcaatctca
     4621 ctgcgaattt tatgctgtgg gtgattgcga tgatgttacc tgcttttggg gttcagcttt
     4681 attatttcgg ctatggtgtg ctgattcaaa cgttgcttgc cgttagcctt gcgattgtga
     4741 ttgaaatcgg gattgcaaaa ttacgcaaaa aaacaaccgc tttctatttg gctgacttat
     4801 caggtatttt aaccgccttg attttggcga tgtcgattcc gccttatgct ccttattggc
     4861 ttgtgttgat tggcgtgatt gtggcgttat tattggcaaa acacagttat ggtggcttgg
     4921 ggcagaatct atttaacccg gcaatggttg gctatgcgtt gttgttggtt tctttcccgg
     4981 tgcaaatgac ggcgtggata gtgccgattg agttattaag tgaaccaccg acatttcgtg
     5041 atgcgatttc gttgattttt tacggggtaa ctagcgatgg ttttagtatt catcagctag
     5101 ttaatagtgt tgatggcatt gcacaagcta ccccgcttga tagtatgaaa agcagccttg
     5161 caaaatcagg ttttgacgcg gtaatgaata cgccgatttt caacgggctg tttgcgaccg
     5221 gttggctaca actgaacctt gcgttcttat tcggcggttt ggtgttgatt tataaacgga
     5281 ttatccattg gcaaattccg gtagcaatgt tggcaacttt tgcctttttt agtggattca
     5341 ccgagctgtt tagccaacaa tcgcacttgc attttgtgag ccatttcttt agcggtgcga
     5401 tgatgttcgg ggcatttttt attgcgaccg acccggtaac agcctccatt accccaagag
     5461 gaaaactgat tttcggtggc ttggtgggat tattggttta tctaatccgc tactacggaa
     5521 attaccctga tgcgattgca ttttcagtgt tattggcaaa catttgcgta ccgttaatcg
     5581 accattatac gcagccgaga ttatacggca caaaattgga taacagataa tgaacacctc
     5641 aaaaattacc ttaaattacg ccttaatttt aggctttatt gccttgcttt gcaccgctgt
     5701 ttcaaccggt gtgtacctgc ttaccaaagg caagattgat gatgtaaccg caatgcaaca
     5761 acgcaaatta ttggaagagg ttgtgccgaa aagccatttt gataatgatg tgttggcgac
     5821 ttgcaaactg gttcagctcg aaaatgcccc ttatttgaac cgtatttatg ttgcaaaaaa
     5881 atcggaaaat ctgaccgctt acctagttca aggaacggct ccggacggct attccggcga
     5941 tattgtgcta ttgatgggga ttgagccgaa cggcaacatt ttaggcgttc gcacccttga
     6001 gcataaagaa actccggggc tgggagataa aattgagacc cgagtgtcgg attggatctt
     6061 atcttttacc aatcaacttt ttagtttaga aaacgaagcg gattggaatg taaaaaaaga
     6121 tggcggcaag ttcgaccaat ttaccggtgc aactattaca cctcgtgcgg tggtcaatca
     6181 tatccgccaa agtgcgaaat gggtggtgac agagctggct caaaacccga caatgtttaa
     6241 tcaatttaaa gcgtgcaaat agggggagaa atggaaagag aacaacaaat ccctgtgacg
     6301 aatattgacg ttgccccgaa acaatccagc gtttggaaaa cgattttcgc tgatggtgtg
     6361 tggaaaaata atggtgcttt ggtgcaatta ttagggcttt gcccactact ggcggtttca
     6421 aacagcgtaa ccaatgcact tggactaggc ttggcaacaa tgtttgtgct aatttgcacc
     6481 aatatcacgg tttccctgtt tcggaaaatc actccacacg atattcggat tccgatttat
     6541 gtgatggtaa ttgcaacggt ggtaacggca gtacagcttt taatgaatgc ttttgctttc
     6601 cctgtttacc aatcgctcgg gatttttatt ccgctgattg taaccaactg tatcgtgatt
     6661 ggacgagcag aagcctatgc ctcaaaaaat gaggtcaaat tctcggcttt tgacggcttt
     6721 tcaatggggc tgggaatgac ttttagcctt gtggtgctag gcgcgttgcg tgaaattatt
     6781 ggcaacggca cgctgttttc aggcttagat ctactccttg gcgattgggc aaaagcccta
     6841 cgcattgatg tattgcatat tgattcaggt ttactactgg caattttacc tccgggggct
     6901 tttattggac ttggggtgat attggcggtg aagaatatta ttgataagag atgatgtgtt
     6961 atgtcacttt tctttgcttg tgcaaagaaa agtaaccaaa agaaagcaca ccctgctttg
     7021 ttgctatcct cacttggttg aaattttctt aacgaaaaat aaccctgatg ttcgcttcgc
     7081 tctcgctcga gttattttcc taaaaatttc aagtcgttcg ggcaactcag aagggaaccc
     7141 gatccgacca tacaagcggt gatttttttg gaaaattttg caaaatgatg ctctgccggg
     7201 ttcccttctg aaccgcccga acgactttga atttgtagga aaaattcctt gtttgagcag
     7261 cgaagcggcg agtttggaat tttttcgtta agcaaattca aaccaagcga agatagcggt
     7321 gaagtagggt tgcctttctt tggttacttt ctttggcgaa gcaaagaaag tgacaaataa
     7381 tgaggaatta tagaatgaca cgaattaccg cccaagacgg ctatacgcac aaattcctat
     7441 ggtcttttct acacccgaaa tattggggcg tatggttagg tgtattagga ttagtgattt
     7501 tagcctatgt gccggtgcga attagggata aattatccgc ttttgtgggt aagatggcgt
     7561 atcgctatct caagcagaaa aataaaaaag gctaccaccg tgctaaagtg aatttgcgtt
     7621 actgttttcc cgattggagt gagaaaaagc gtgaagaagt ggtcgagaaa atgtttatca
     7681 cggtagcaca aaccatgttg gcgattggcg aaactgcaat ccgcccggcc tcttatttac
     7741 aaaaacggtg tgaatttacc ggctttgaaa atgtggtgaa agccaaagag agcggtaaaa
     7801 acgtgattat gttagtgcca catacttggt cgattgatat ggcgggggtg gcgatgttct
     7861 cgctcggtta tccgatgaca tcaatgtaca atccacaccg taatgcgttg gtggactggc
     7921 tgtggaatat tacccgtgag cgtttaggtg ggcgaatgca cactcgtcaa aatgggatta
     7981 aagcgttttt agccgatgtg cgtaaaggtg atgttggtta ttttctgccc gatgaagatt
     8041 tcggcgaaga gctaagtgtg tatgccgact tttttgccac cgaaaaagcc actttgccgg
     8101 gcttaaataa aatggcaaga gtggcaaatg cggaagtgat cccaatgttc tcgatttata
     8161 atgcggaaaa agcaaaatat gaaatggaaa ttttgccacc gcttgaattt tcaggagacc
     8221 caattcaatc cgcccgagaa atgaaccgag taattgaata ttttgtggag aaaaaccccg
     8281 agcagtatgt ttggatttta cgtttgctta aaaccagacg aaacagggaa gatatttatc
     8341 tataatatag ggaaaaggaa actgaaaagt aagctgtact atcaaacgta aggttatcaa
     8401 tttctccttg aaatttctgc tgtttttcta tagagttttc cagttatttt tttattacac
     8461 gtaggtcaaa caatgaacca attagattta attaaatctt ctatcaaatc cattccagat
     8521 tatccgaaag cagggattat cttccgtgat atcacttcac ttttagaagt gccaactgca
     8581 ttccaagcca ccattgatgc catcgttgca gaatttaaag acaaaggtat tactaaaatt
     8641 gtcggcacag aatctcgcgg gtttattttt ggtgcccctg ttgcattagc gttaggcgtg
     8701 ccttttgtgt tggttcgtaa accgaaaaaa ttaccacgtg aagtgatttc gcaatcttac
     8761 acgcttgaat atggtgaaga cacgctagaa attcataaag acgcagtgag tgctaatgat
     8821 aatgtattgg tcatcgacga tttactcgca accggtggta ctattgatgc aactgcaaaa
     8881 ctaattcgtc gcttaggtgg taacgtagaa cacgctgcct ttgtgatttg gctgcctgag
     8941 ttaggtggta aagagcgttt ggaaaaagaa ggggttaaat cctttagcct agtcagcttt
     9001 gaaggtcatt aatggggaac aagcggtggc tttttgctaa aattttgcaa aatttttcgg
     9061 aaagatgacc gcttgtgatt tccaaattga atagaaaaat caatgagtta tcaagtttta
     9121 gcccgtaaat ggagaccgca acgcttctcg gaagtagttg gtcagcaaca cgttttatct
     9181 gctcttgaaa acagcttaag agaagataga ctgcaccacg cttacctgtt ttcaggcact
     9241 cgtggtgtgg gtaaaacctc tattgcccgt ttattcgcca aaggcttaaa ctgtgtaaac
     9301 gggatcaccg ccgagccttg cggtgaatgt gcgaattgta aagcgattga agaagggcat
     9361 tttatcgatc tcattgaaat tgatgctgct tctcgtacta aagtggaaga cacccgtgag
     9421 ctacttgata acgttcaata caaacccacc gttgggcgtt ttaaggttta tttaattgac
     9481 gaagtgcata tgctctctcg tcatagtttc aacgccttac taaaaaccct tgaagagccg
     9541 cctgaatatg tcaaattctt gctggctacc actgatccgc aaaaactgcc gattacgatc
     9601 ctctctcgct gtatgcaatt tcatctgcgg gcattagagc aatcgcaaat tgcccgtcat
     9661 cttgaattta ttctaaatgc agagaacatt ccgtttgagc ctttggcact agaaaagttg
     9721 gcaaaagcag cacaaggtag tatccgagac tctctcagcc tcaccgatca agccattgca
     9781 atgagtaatg ccaatattac gcttgcgata gtcagccaaa tgctagggtt gattgacgat
     9841 aatcaaccac tagaattagt gcaagcaacc gcccaagccg acggtgaaaa agcaatggcg
     9901 atcatcgagc aaattgcagc gaaaggcgtt gattggcaac aattattaag cgatgtggca
     9961 gaagtgttac acaaaattgc aatgttgcaa ttagtgaaaa cacctacaac cgaagaaaca
    10021 ttagtgcatt ttctggcaaa acaaattccg cccgaagacg tgcaattttt ctatcaatta
    10081 atcctcaaca gtaaaaaaga gttgcctttt gcaccggagc aacgtgccgg tgttgaaatg
    10141 gcgattttgc gtgcgttggc tttccaccct aaacaggcag aaaaaatagc aacagttgca
    10201 gtggaaaagg ttacacaacc aaaccattcg gtttcagcgg ttacgacagc aaaaccacaa
    10261 aatcaaatta gccagctaag agaaaatttt gagcaaaatc agcaaaaaac ggttactgtt
    10321 gccaatacta ccacagcggt tgaaagcatt gctcaaccgc cacaggcagt agataccgct
    10381 atttcgccgt ctgctcctgc gactctttca ccggcaatgg cagccctcga agcccgcaaa
    10441 aagctacaag cacagcaggc aaatttagct caaaccgaaa aaaaaaagcc tgagctaaaa
    10501 gcccctcaag ttattgcaaa aaaatcggca aatcagaccg cttcattgca agagcggttt
    10561 atcagcttgg cggaaaatca gcacaaagcc gtactgcaag tttcaaagaa aaccgaatcc
    10621 gcccctaaaa gtgtggaaga tgaagattat cgctggacgt ggctcaatcc tgaattagaa
    10681 aatcaagcag acagtgccaa accttctgat attaaacaag cgattttgca agaacgcacc
    10741 cctgaattag tggcaaaaac cattcattta tcttgtcagc aggataaatg gtgtgacatc
    10801 gccaactcac tcaatttagg cggattttcc cgtcagatcg ccttaaatag ctatttagcg
    10861 gaacaaaatg aacagcacct cgcattggtg ttaaagccga atatggctca cttagataat
    10921 ccggaatcac gtaaaaattt agaagctgcc cttgccgaaa aaggctattc atacgaattg
    10981 accattggtg acaatagcga acagcaaact ccgcttgaaa ttcggcgagc cattttcaaa
    11041 caattaactg aggcagcaaa atcagctctg cttaacgatg aaaaattaat gttacttcgc
    11101 aacgcttttg atgcacaaat tgatgaatcg accattcgag cggtggcgga aactgagtaa
    11161 aacaaatgaa agcattagaa ttaattgatt tggtaaaaac ctacccaaca ggtgtaaaag
    11221 ccgttaaagg cattaatctt gtggtcgagc aaggtgattt ctatgcccta cttgggcata
    11281 acggggcagg taaatctact actattggca ttatcagctc actggtaaat aaaaccagcg
    11341 gcagcgtgaa agtgtttggc tatgatttag acacccaaaa agtcgaatta aagcatcaaa
    11401 tcggcttagt gccacaagag tttaatttca atcagtttga aaaagtgatt gatgtgctag
    11461 tgcaacaagc cgggttttac ggcattcctc gcagtgaagc cttagtacgt gccgaaaagt
    11521 ggctgaaatt gctcgaccta tgggaaaaac gcacccacct cacccgtgag ctttctggtg
    11581 gaatgaaacg tcgggtgatg attgcccgag ccttaatgca caatccaaaa ctactgattt
    11641 tagatgaacc taccgcaggg gtggatattg aactccgccg ctcattgtgg gatttcttgc
    11701 gggatctaaa caatcaaggc acaactatta ttctcactac ccactattta gaagaggcgg
    11761 aaaccctatg ccgtcacatc ggcattattc aacacggcga attaattgaa aacacctcaa
    11821 tgaaagcctt gcttgccaaa ttggaaagtg aggtatttgt gttagatttg caaaattctg
    11881 agcaaaatca accgcttgtg attcaaaatt acccgcataa atggcttgat gaaaacaccc
    11941 ttgaagtgaa tgtaaaacgc cagcaagggc taaccaatct gttttcgcaa atttccgccc
    12001 aaggggctga ggtgctaagt atgcgaaaca aatcaaaccg cttggaagaa ctatttatca
    12061 atatggctca gtaaaatgaa tttaatcgga ttttatacct tagcttacaa agagtgccgc
    12121 cgcattttgc ggatttggcg acaaacttta gtgccaccgg tgattactac cacgctctat
    12181 tttttaatct tcggcacgct gattggtggg cgaatcgggg aaatgaatgg cgtgggttac
    12241 acccaattta ttgcacccgg cttaattatg atgaccgcca tcaccgcctc ttatgtgaat
    12301 accgcctctt catttttctt gagtaaattt acccgagatt ttgaagagat gctgatttcg
    12361 ccactctcta cccataatat tatttggggt tatgtcaccg gcagtatttt gcgtgcaggt
    12421 ttagccgcaa ccttagtaat gtgcgtggca atggtgtttg tctcgtttga aatctactcg
    12481 gttgcgatta tcgtcttaac cctgttgctg acaatcattg cctttgcgtt aggtggcgta
    12541 attaatgcgg tgttcgcccg ctcctttgat gatgtggggc tgattccaac ctttgtgctt
    12601 actcccttaa cttacttagg cggcgtattt tactctattt cattactgcc tgaattttgg
    12661 caaacggtgt ctaaattcaa cccgatcgtt tatatgatta acggcttaag atatggcttt
    12721 ctcggtatca gcgatgtgcc gttaggttat acttttgcag tgcttacttc actttgcatc
    12781 ggcttgtata ttattgccta ttccttaatt caacgagggg ttgggctgcg ttcttaacta
    12841 attgtgaggt tatgaaaatg aaagcattaa aaaaactagc aattacaatg gcattaacgt
    12901 tatcaggcac agccttttca caagagatta ccgtgtttgc tgccgcttca atgacaaatg
    12961 tgttacaaga tattcagcag gattttgaaa aagcctatcc acaggataaa atcacgttct
    13021 ccttcgcttc atcatcggta ttagcaaagc agattgagca agatgcaccg gcagatattt
    13081 ttatttccgc cgaccaaaag tggatggatt atgttgccga aaaacaacct gagaaagtta
    13141 aacatcgccg caatttagtc agaaacgagt tagtattaat tgcacctacc gaaagtaaca
    13201 ttgagccaaa agcgatacaa gcggtcgatt ttgccaaaga attagcaaac agctatttat
    13261 cggtgggaga cccaaaccac gttcctgccg gcaaatatgc caaaaaagcc cttagtcatt
    13321 accaattatg ggaaagtgtt gaacctcgtt tagcgagggc aaaaaatgta cgagatgccc
    13381 tctcttttgt cgagcgaggc gaatccccac ttgggattgt ctattccacc gatgctaaag
    13441 tgtcgaataa agtcaaagtg gttgccgttt tcccaccgga aagctacggc gaaattgttt
    13501 accctgctgc ggcagtcagt gaaaaagcct ctgccgccac atttttagat tttctcaaaa
    13561 ccccgaaagc aaaagcgaaa tttgaggcag ctgggtttta tcctgtaaat taaatttact
    13621 ctctcccctt gtgggagaga gacagaaaaa tatgtcgttc agacatattt ttcagagaga
    13681 gggcaaatag cgtttaaaat attccccctc tccctgattt ttcttctgaa cgaagaaaaa
    13741 tctatccctc tcccacaagg ggcgagggta agcttataac caaatagttt tagattatgc
    13801 ttaatttcac cccacaagaa ctcaatgcga ttgttctaag cctaaaagtt gcctccattg
    13861 ctgtagtgct tgcattaccg cttgccgtgt gggtggcgtg gctgcttgcc cgcaaacagt
    13921 tttggggaaa aaatctgctc aatggtatta tgcatctccc tctggtgtta ccgccggttg
    13981 tcattggcta tttattgctt atttcgatgg cgaaacgagg ggtaatcggg caatatttgt
    14041 gggaatggtt tcatttcagc ttgagttttt cgtggaaagg agcagtgctt gcctcaatgg
    14101 tgatggcgtt tccgctaatg gtgcgttcta tccgtttagc ctttgaggca gttgatccta
    14161 aattggagca agccgccaga acgcttggag caataccgtt aaaagtgttt ttcacgctca
    14221 ctttaccgct ctctttttca ggcattattg ccggtggcgt gctgggtttt gcccgctctt
    14281 tgggggagtt tggggcaacc atcacctttg tctccaacat tcccaaccaa acccaaacca
    14341 ttcctgccgc ccttttcacc tttattgaaa cccccgatgg cgaaatggct gccgcccgtt
    14401 tgtgcttggt ggcgattctg atttcactca ttgccctgtt ctgttcggaa tggctggcag
    14461 aaaggcaaaa acgctatgct caaacttaaa cttcttcagc aactcggcaa tctgacgctc
    14521 aatgtcaatc tcgatttgcc gaataaagga atcaccgcta ttttcgggcg ttccggtgcc
    14581 ggtaaatcca gcctgattaa tttaattgcg gggctttcaa ccgctcaagc cggctttatc
    14641 gaattaaacg gtcaggtgct gtttgacagc caaaacggca tcaatttacc acctgaaaaa
    14701 cgcaacattg gctatgtgtt tcaagagcat cgccttttcc ctcattattc ggtggaaaaa
    14761 aacttaaaat atggctacaa gcggtcggat tctgcggatt ttttgcaaat tgtggaactg
    14821 ttaggcattg cccctttgct taatcgctat ccggcaagcc tttccggtgg cgaaaaacaa
    14881 cgtgtggcga ttgggcgggc gttattaagc tcaccgaata ttttgctgat ggacgaacca
    14941 ttatctgccc tcgatctccc tcgtaagcaa gagctactgg actatttaga taaattatcc
    15001 gctcggcttg aaataccgat tctgtatgtc agccacagtt tagaggaagt agttcgattg
    15061 gcagatcatc ttgtgctgtt ggaaaacggc aaagtaaccg catttgatac cctttcagcg
    15121 gtttggcaca gctcggcatt ttccgcttgg cagccaaatc atcagcgaat tagcctgctt
    15181 gaattaccgg tggaagaaac acttccccac tataatatgc ttggcttgag cttgaacgca
    15241 cagcgattat gggtgaacca actcccccgc catcaaatag gcgagaagct aagggtaact
    15301 attgccagca aagaggtttc aatcagctta caaaaaccga ctcaaagctc aattcgtaat
    15361 gtgttaaaag gcaatgttcg gaaaatagaa acgcatttag atcgggttga tctggcaatt
    15421 caagtcgaaa atcagcaaat ttggagtacg atcagccttt ggtcttttaa tgaattagcg
    15481 attcaaccgg agcaagaggt ctatcttcaa atcaaaagcg tttctttata ggcttgcaaa
    15541 tttacgctaa aatatgaccg cttgttaatt cccaaaagag acattatgcc aatcgttaat
    15601 caatctgccc tcgtgcctta tagtgccgag caaatgtatc aacttgttaa tcagtatgaa
    15661 aaataccccg aatttttatc cggctgcgtg agtaccaaaa cccttagcac cggcgaaaat
    15721 gaattaaagg cagagttaca cattcagaaa ttaggcatta gccaaacttt cagtacccac
    15781 aataaaatga cgccgcccta taaaatcgag atggcattaa ttgaagggcc tttccgccat
    15841 ttacacggag cttggacatt cacccccttt gatgagcaaa gttgcaaaat tgccctgcaa
    15901 ttaaattttg aattttccag cccaattgta gcaatggtgt tcggcaaggt gttcaacgaa
    15961 ttaactttaa aaatggtaaa tgctttcaaa caacgtgcaa aagaggtgta tggtgtctga
    16021 acaacgtcaa aatccagaag aacaaaaaag tgaagaacag aaaattaatg ttgaggtgct
    16081 ttatgcttac cctgataaat attttctgaa aaaactgcaa gtaccgcaaa acgcgaccat
    16141 tcaaactatt attttgctct ccggcgtgtt ggaaaaatat accgaaattg acttgcgtga
    16201 aaacaaagtc ggtattttta gccgcccggc aaaactgaat gaaacggtgg aagaaggcga
    16261 cagaattgag atctatcgcc cgttaattgc tgatccgaaa gaaatcagac gcaaaagagc
    16321 ggctgagcaa gcggagaaga aatagctttc tcctattcaa tctaggggtg aataattatt
    16381 cgccctatct attttctccc tcgccattcc tgctataaat tccctccttt gat
//
LOCUS       DANMCL010000065        16242 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.065, whole genome shotgun sequence.
ACCESSION   DANMCL010000065 DANMCL010000000
VERSION     DANMCL010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16242
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.065"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            97..1515
                     /gene="leuC"
                     /locus_tag="PXF40_001834"
     CDS             97..1515
                     /gene="leuC"
                     /locus_tag="PXF40_001834"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HDL5803155.1"
                     /translation="MQQAKTLYQKLFDSHVVYEAEGETPIIYINRHLIHEVTSPQAFD
                     GLRVAGRQVRQVSKTFGTMDHSISTQVRDVQQLEGQAKIQVLELEKNCEETGIPLFDI
                     TKKQQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTL
                     KQARAKSMKVEVRGKVNPGITAKDIVLAIIGKTTMAGGTGYVVEFCGEAIRDLSMEGR
                     MTVCNMAIEFGAKAGIVAPDETTFAYLKDRPNAPKGQDWEDAIEYWKTLKADEGAVYD
                     AEVILEAKDIAPQVTWGTNPGQVIGIDDVIPNPEDMADPVTRASAEKALAYIGLEAHT
                     DMKDVPVDQVFIGSCTNARIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKE
                     GLDKIFIEAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSP
                     AMAAAAAVFGKFMDIRKVSLNA"
     gene            1528..2130
                     /gene="leuD"
                     /locus_tag="PXF40_001835"
     CDS             1528..2130
                     /gene="leuD"
                     /locus_tag="PXF40_001835"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HDL5803156.1"
                     /translation="MAGIKQHSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFH
                     EWRYLDAEETQINPDFVLNFPQYQGATILLARKNLGCGSSREHAPWALADYGFKVMIA
                     PSFADIFYNNSLNNHMLPIKLTEEEVEEIFQWVWANEGKQIHVDLEAMTVTVGEKVYT
                     FELDEFRRHCLLNGLDNIGLTLQHEAAIAAYEKNIPAFLR"
     gene            complement(2202..2666)
                     /locus_tag="PXF40_001836"
     CDS             complement(2202..2666)
                     /locus_tag="PXF40_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803157.1"
                     /translation="MNKFKIALMATVAIGLFACTPSPQSNSTKQQAQVGYLKQNISQA
                     ELNNPKDFKRYSYYCKNFATGSSSYLATYFPLWSESRKQENFGIYFQLDGGKVYPFDH
                     LANISLNARATKFEVRYRSYQPIEGSFVELVAREFTSTYYKNNVPWLECREG"
     gene            complement(2690..3196)
                     /locus_tag="PXF40_001837"
     CDS             complement(2690..3196)
                     /locus_tag="PXF40_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803158.1"
                     /translation="MADPHIQSPMDFWDYLTVIIYRSGFVLATLMLLLLPYYPQTAQY
                     GLLVSGTMLASSLHLYAKSFRLIFQFSVWIGLLGAVFNFPLLAFGAMLLVIGGLSYKE
                     YFCFRVFGLNFQPLLVAVLWIAFALEWSLLVQILSLVCGLLLLVLSIQKWRMPLHFDI
                     GDKSKYQI"
     gene            complement(3219..4196)
                     /gene="dusA"
                     /locus_tag="PXF40_001838"
     CDS             complement(3219..4196)
                     /gene="dusA"
                     /locus_tag="PXF40_001838"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HDL5803159.1"
                     /translation="MTNEIQPFYRGRFSVAPMLDWTTRHCRYFHRQFSRQALLYTEMI
                     TAPAIIHAKYDLLEYDPSENPVALQLGGSDPAQLAHCAKLVAERGYAEINLNVGCPSD
                     RVQNGMFGACLMAKADLVADCIKAMQDAVEIPVTVKHRIGIDDLDSYEFLCDFIEKVQ
                     PYSNDFIVHARKAWLTGLSPKENREIPPLDYDRVYQLKRDFPHLKISINGGIKTIEEI
                     KQHLQFVDGVMVGREAYQNPSMLGEIDSQIFNENRPLVTAKEAVEKMFPYIERELAKG
                     VYLNHIVRHMLGAFQHCKGARQWRRHLSENATKSGAGVEVVEQALAFIG"
     gene            4547..5524
                     /locus_tag="PXF40_001839"
     CDS             4547..5524
                     /locus_tag="PXF40_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5803160.1"
                     /translation="MSRNLFQKRLNIKPYEYPELLEFKDAIRHSYWLHTEFNFTGDIQ
                     DYRTTINDHERHVLTRAMLAISQVEVNVKRFWGELYCYFPKPEMDDVGGTFAESEVRH
                     KDAYSFLLEKLGLNEMFSQIHEIEPLMNRIRYMESFMKDKDAGKGEFVLSLVLFSLFV
                     EHISLFGQFIIMMSFNKHKNLFKGISNAVEATSKEEEIHGKFGIALYEILRDEHSELF
                     TPEFFEDLQTLANQAFEAERGILDWIFEEGDLSFITKATVENYIKNRYNNSLSILGLE
                     PPHDIDPELLKETEWFDIEILSTKETDFFNKRSTDYSKKMKQITADDLF"
     gene            5511..7178
                     /locus_tag="PXF40_001840"
     CDS             5511..7178
                     /locus_tag="PXF40_001840"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5803161.1"
                     /translation="MTYFNTDRPDFHWLNEDSRLFLQRGYLLEGTTALDRIRFIAEHA
                     ERKLGIEGYADKFYHYMARGYFSLSSPIWSNFGLDRGLPISCFGSYIGDSIHEIMVTT
                     AEVGMMSKIGGGTSAYFGDIRPRGSLIKNNGKSDGSFNFSKLFDTVIDVISQGTSRKG
                     QFAGYIDIEHGDIDEWLDIHTEGNPIQLMYYGVCVGHDWLESMKAGDPYKRQLWAKLL
                     QRKTETGIPYLFFKDNANAGRPDVYKDKNMTIHASNLCTEIMLPSSNEESFVCCLSSM
                     NLLYFDEWKDTDAPETLTYFLDVVMSEFIEKSQSIPFLDRANRFARRHRALGLGVLGW
                     HSYLQANNIAFDSFQAMQKNNEIFKTLQAKTLKASQELAQRFGEPEILEGYGRRNTTL
                     MSIAPTKSSSFILGSVSPSVEPFKSNYYVKDLAKIKTVYKNPFLEKLLQEKGLDTEEI
                     WTSILQNDGSVQHLEQLSEHEKEVFKTFAEISQLSVIQQAAQRQKYIDQGQSINVMIH
                     PATPARDLNQLYLTAEELGLKSIYYQNSMSAAQVFNRNLLSCSSCEG"
     gene            7182..7601
                     /locus_tag="PXF40_001841"
     CDS             7182..7601
                     /locus_tag="PXF40_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803162.1"
                     /translation="MGNLSHTSPNTIVEVVGEFPEITSSGYTFDKGPIQLRIGKHTAP
                     NKGFGVKHIEAEHMQEILNLGFTSVNEFVKAIIVENAKIFCEFSDLKGNHRPIILKAS
                     IGIVVLERKFLESGTIYSVVTAYRRTNPHGIQIGTMK"
     gene            complement(7836..8597)
                     /gene="nudC"
                     /locus_tag="PXF40_001842"
     CDS             complement(7836..8597)
                     /gene="nudC"
                     /locus_tag="PXF40_001842"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HDL5803163.1"
                     /translation="MNKGYWIIVSDFDIALEAGEIPFGSAEELGLSGREKLTIGQYQG
                     SPAYLVKALESDNQREFAYLRSQINRPPELSHLLHRAVSLNHFFQTHQFCGKCGEKTI
                     LASDEIAIYCNACGNRAYPTISPSIIVAVRKGRQILLANHLRHKGTIYTTLAGFVEAG
                     EAVETAVHREVFEETGIKVKNVRYFGSQPWAFPNSLMLGFLADYESGEIQLQEEEICD
                     AKWFDCEESLPEIPQQGTIAFELIQATLKLCRESK"
     gene            complement(8590..9273)
                     /locus_tag="PXF40_001843"
     CDS             complement(8590..9273)
                     /locus_tag="PXF40_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HDL5803164.1"
                     /translation="MKQPTFKRMTNKRSNFAKNLQKNPQKRPLTFAETTLVLLNKPYD
                     VLTQFTDEQGRKTLKDFITMPNIYPVGRLDRDSEGLLLLTNNGEIQHRLAHPKFDKQK
                     TYWVQVEGVPQPEDLAKLAKGVELKDGLTKPAKVRAIATPDFAWNIAPQIRERKTIPT
                     SWIELIISEGKNRQVRRMTAHIGFPTLRLIRVGIGQFRLGNLGCGEFQVLSENEKRKL
                     FTQLGLKDE"
     gene            complement(9270..10118)
                     /locus_tag="PXF40_001844"
     CDS             complement(9270..10118)
                     /locus_tag="PXF40_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5803165.1"
                     /translation="MEKRTLALLKVHGTAVLFGASGIFGALIQSSAETIVLGRVMIAF
                     AIISLYFLWKKQPLVKLNLQQMAQLAFSAALLAAHWVTFFVAVKVGGVAVATLGFASF
                     PAFVALFESLFFREKLRFREVVLLIAITVGLILVTPEFTFGNQATQGLLWGVLSALVY
                     GILAVANRRTMSKISGVQASWWQYIFATLFLLPLSITEFPSVSTQDWFWIFCIGFLCT
                     TLAYTLFISSLDTINARTASMIISLEPVYAIVIAWLCFNEVPTLKMIIGGLIILLSVA
                     WANLKK"
     gene            complement(10118..10603)
                     /locus_tag="PXF40_001845"
     CDS             complement(10118..10603)
                     /locus_tag="PXF40_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HDL5803166.1"
                     /translation="MPILAILFGIFFYIYCEISLLVNIGSIIGVLPTILLLVVISFLG
                     LWIVKLRGVYTLFSIKQDLSQGKIPTEAVGNSVMFIVAGILLIIPGFLSDILAILCVL
                     PFSRKWIQAFVINSVKNKVFMHFTAQTSSFSVTSAQDSNTFDAEFERKPDEQDQHNRI
                     K"
     gene            complement(10605..11927)
                     /gene="pepQ"
                     /locus_tag="PXF40_001846"
     CDS             complement(10605..11927)
                     /gene="pepQ"
                     /locus_tag="PXF40_001846"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HDL5803167.1"
                     /translation="MKNLFSTHLARLQQTVQSLLENAFLDGLWIYAGKAKTLFLDDQT
                     APFKINPYFNYFFPYPQAENCWLFLDGKNKPKIYFYAPEDYWVSTLKVPTEAFFAAEF
                     EWVLLRAENEIATFIQNPTACAFIGEDVELAKKLGFSHINPQKVLNSLNFARSIKTEF
                     EIESIYQAQFSALKGHQVAKEAFFAGKSEFEINLEYLKATQQSDLNVPYGNIVAINQN
                     GAVLHYTALDFDTHAKRHSFLIDAGTTVNGYASDLTRTYAFDSGSEFAELVAKMEQLK
                     LQIIAELSIGVNYLHYHTRMQQMISQLLAEHQFIHLSAEQIFEQGISRTFFPHGLGHL
                     LGIQVHDVGGFQQNARGSHKAPPEVYPSLRCTRELQENMVLTIEPGFYFIEMLLKPWK
                     NSALSSAFNWQKIEAFKAFGGIRTEDNIVMRANGAENLTANAAATLGG"
     gene            11938..12180
                     /gene="tusA"
                     /locus_tag="PXF40_001847"
     CDS             11938..12180
                     /gene="tusA"
                     /locus_tag="PXF40_001847"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005710491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HDL5803168.1"
                     /translation="MTQLTVNKELDTLGLRCPEPVMLTRKTIRNMEEGEILHIIADDP
                     ATTRDIPSFCEFMDHQLIQKEVDSTPYHYWIKKGLE"
     gene            complement(12247..12678)
                     /gene="rraB"
                     /locus_tag="PXF40_001848"
     CDS             complement(12247..12678)
                     /gene="rraB"
                     /locus_tag="PXF40_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HDL5803169.1"
                     /translation="MYNLDELRTETDETISSLLADGSDPEALYIIEHHVAHHDFDKLE
                     KLVVDAYKLGYEISEAEEVEDENGKVIFVCDIVSEIHLNADLITAQQKELLPLIEKAG
                     AEYEGWGTYFEDPNADEDEYGDDGEFFDDENDDFEDEPRRH"
     gene            complement(12693..13304)
                     /locus_tag="PXF40_001849"
     CDS             complement(12693..13304)
                     /locus_tag="PXF40_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HDL5803170.1"
                     /translation="MKLNYHKTHFLTSAPDIRHLPEDTGVEIAFAGRSNAGKSTALNA
                     LTNQKSLARTSKTPGRTQLINLFKVETNCKLVDLPGYGYAAVPEQMKIQWQKALGEYL
                     QKRECLGGVVILMDIRHPLKDLDQQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKM
                     VREAILPFQGDIQVEAYSALNKIGIDKLSNKLDSWFAPKLITE"
     gene            complement(13306..13722)
                     /locus_tag="PXF40_001850"
     CDS             complement(13306..13722)
                     /locus_tag="PXF40_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HDL5803171.1"
                     /translation="MSWYKALFSFNGRLNRRGFWIGFGIHFLFLFMVAMWINLAELSL
                     LSVLPLIITGFSLSAIIIKRLHDRNRSAKALLMALVPIICYLAAPYSQGIMQILLGQV
                     MPAFIGMLLFLEWGVFAGNPEPNQYGEQGLSFKFRE"
     gene            complement(13726..14556)
                     /locus_tag="PXF40_001851"
     CDS             complement(13726..14556)
                     /locus_tag="PXF40_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HDL5803172.1"
                     /translation="MFEYFLSLSPIWQAFLAGLFTWGCTIFGSSFVYFFKSVNRKLLD
                     SMMGFAAGVMIAASFWSLLAPSLEYAEADYGSLAWLPAAIGFLAGGAFIRLIDYVVPH
                     LHLSKPIEQAEGNDQLKQGLSKSTLLFLAITIHNIPEGLAIGVAFGALATQVSGVDAS
                     IMGAIGLAIGIGLQNIPEGSSLVLPIRGEGHSRKKAFWYGSMSAVVEPIAAVIGAVFV
                     LSMTAILPYALAFAAGAMIFVVVEELIPESQSSGNTDIATLSLMLGFVVMMVLDVALG
                     "
     gene            complement(14893..15008)
                     /gene="rrf"
                     /locus_tag="PXF40_001852"
     rRNA            complement(14893..15008)
                     /gene="rrf"
                     /locus_tag="PXF40_001852"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(15170..>16242)
                     /locus_tag="PXF40_001853"
     rRNA            complement(15170..>16242)
                     /locus_tag="PXF40_001853"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         4953 a         3630 c         3168 g         4491 t
ORIGIN      
        1 atattcactc catatcagca agcggtcatt tttgcaaaat tttttgcaaa tttaaccgct
       61 tgtattaaaa gttacccttt tgagttggaa cattttatgc aacaagccaa aaccctatat
      121 caaaaactat tcgactcaca cgttgtgtat gaagccgaag gcgaaacgcc gattatttat
      181 attaaccgcc acttaattca cgaagttacc agcccgcaag cgtttgacgg cttgcgtgtt
      241 gccggtcgcc aagttcgcca agtcagtaaa accttcggca caatggacca cagtatttca
      301 acccaagtgc gtgatgtaca gcaacttgaa gggcaagcga aaattcaagt attagaatta
      361 gaaaaaaact gcgaagaaac cggtatccca ctgtttgaca tcactaaaaa acaacaaggt
      421 atcgttcacg taatggggcc ggagcaaggc ttaactttac ccggtatgac cattgtatgt
      481 ggtgactcgc acaccgccac tcacggggcc tttggtgcgt tagccttcgg tatcggtact
      541 tccgaagtgg aacacgtttt agccacccaa accttaaaac aggcccgtgc aaaaagtatg
      601 aaagtggaag tccgtggcaa agtaaacccg ggcattaccg caaaagatat tgtgcttgcg
      661 atcatcggta aaacaactat ggctggcggt acaggctatg tagtggaatt ttgtggcgaa
      721 gcaattcgtg atctttcaat ggaagggcga atgacagtgt gtaatatggc gattgagttt
      781 ggtgcgaaag ccggtattgt tgccccggat gaaaccacgt tcgcttactt gaaagaccgc
      841 ccaaatgcac caaaaggtca agattgggaa gatgccattg aatattggaa aaccctcaaa
      901 gccgatgagg gtgcagttta cgatgcggaa gtgatcttag aagcaaaaga cattgctcca
      961 caagtgactt ggggaaccaa cccggggcag gtgatcggta ttgatgatgt aattccaaat
     1021 ccggaagata tggccgatcc tgttactcgt gcctctgcgg aaaaagcctt agcttacatc
     1081 ggcttagaag cccatacaga tatgaaagat gtaccggttg atcaagtctt tattggttct
     1141 tgtactaatg ctcgtattga agatttgcgt gctgcggcag cagtaatgaa agggcgtaaa
     1201 aaagccgaca atgtaaaacg tattctcgtt gtgccaggtt caggtttggt aaaagagcaa
     1261 gcagaaaaag agggcttgga taaaatcttc attgaagccg gtgcagaatg gcgtaacccg
     1321 ggttgctcaa tgtgtttggg aatgaacgat gaccgcttgg gcgaatggga acgttgtgcc
     1381 tctacgtcta accgtaactt tgagggcaga caaggacgta acggtcgtac ccacttagtc
     1441 agcccggcaa tggcggctgc ggcggcggtg ttcggtaaat ttatggatat tcgcaaagtg
     1501 tcattaaacg cataatagga ggaaaaaatg gcaggtatta aacaacattc aggcttggtc
     1561 gttcctcttg atgcagcgaa cgtagacacc gatgcaatca ttccaaaaca atttttgcaa
     1621 gccattactc gagtcggctt tggtaagcac cttttccacg aatggcgtta tttagatgcg
     1681 gaagagactc aaatcaaccc cgatttcgta ctgaacttcc cacaatatca aggtgcaacc
     1741 attttactcg cccgtaaaaa tttaggctgt ggctcttctc gtgagcacgc cccttgggca
     1801 ttggcagatt acggttttaa agtaatgatc gccccaagtt ttgcggatat tttctacaat
     1861 aacagcttaa ataaccatat gttgccgatt aaattaaccg aagaggaagt cgaagagatc
     1921 ttccaatggg tgtgggcaaa tgaaggaaaa cagatccacg ttgatttaga agcgatgact
     1981 gtgactgttg gcgagaaagt ttataccttt gagttagacg aattccgccg ccactgctta
     2041 ttaaacggtt tggataatat cggcttaacc ctacaacacg aagctgcgat tgctgcttat
     2101 gagaaaaaca ttccggcatt tttacgctaa ttaaaataca aaaaaacggc taacatcttt
     2161 aaggcgttag tcgttttctt tttagccatt ttctttggca attagccttc tcggcactct
     2221 aaccaaggca cattattttt gtaataagtt gaagtaaact ctcgtgccac taactctaca
     2281 aaactgcctt caatcggctg ataagaacga taacgcactt caaattttgt tgctcttgca
     2341 ttcaaactga tgttggcaag atggtcgaac ggataaacct ttccgccatc aagttgaaaa
     2401 tagataccaa aattctcttg cttacggctt tcagaccaaa gtggaaaata ggttgccaaa
     2461 tatgaactgc tgcctgttgc aaaattctta caataatagc tataacgctt aaaatctttc
     2521 ggattattca attccgcttg gctgatattc tgtttcaaat atccaacctg tgcttgttgc
     2581 ttagttgagt ttgattgtgg tgagggcgta caagcaaata agccaattgc cactgttgcc
     2641 attaaagcaa ttttgaattt attcataaaa atcccgataa aatattaaat taaatctgat
     2701 atttgctttt atcgccaata tcaaaatgca gcggcattcg ccatttttga atactcagca
     2761 caagaagcaa caagccacag acaaggctta aaatttgcac caataaagac cattctagtg
     2821 caaaagcaat ccacaatacc gccactaaaa gcggttggaa atttaagccg aatactctaa
     2881 aacagaaata ttctttatag cttaatccgc cgatcaccag tagcattgcc ccgaacgcaa
     2941 gcaaagggaa attaaacaca gcaccaagta agccaatcca aacagaaaat tggaaaatca
     3001 ggcgaaacga tttggcataa agatgcaaag aagatgccaa cattgtgcca gatactaata
     3061 aaccatattg tgccgtttgc ggataataag gcaataaaag caacatcaat gtagctaaca
     3121 caaaaccgct gcggtaaatg atgacggtta aataatccca aaaatccatt ggcgattgaa
     3181 tatgtggatc tgccataact gcctccttaa acaataaatt agccaataaa cgcaagggct
     3241 tgttccacta cttctacacc ggctcccgac ttagtggcat tttcacttaa atgacgacgc
     3301 cactgcctcg ctcctttgca atgttgaaac gcaccaagca tatggcgaac gatatgattt
     3361 aaatagacac ctttggcaag ctcacgttca atataaggga acatcttttc caccgcttct
     3421 tttgccgtta caagcggtcg attttcatta aaaatttgcg aatcgatctc gcctagcatt
     3481 gacgggtttt gataggcctc acgccctacc attaccccat caacaaactg caaatgctgt
     3541 ttaatttcct caatggtttt aatgccgcca ttgatgctaa tctttaaatg cggaaaatct
     3601 cgcttgagct gataaacccg atcataatct aaaggcggaa tttcacggtt ttccttcggg
     3661 cttaaccctg tcagccacgc cttgcgggcg tgtacgataa aatcattgct ataaggttgc
     3721 actttttcga taaaatcaca caaaaattca tagctgtcta aatcatcaat cccaatacga
     3781 tgtttaaccg tgaccggaat ttccaccgca tcttgcattg ctttaataca atccgccact
     3841 aaatctgctt ttgccatcaa acaagcccca aacataccgt tttgcactcg gtctgacggg
     3901 caaccgacat ttagattaat ctcggcatag cctcgctctg ccaccaattt ggcacaatga
     3961 gccaactgtg ccgggtcgct tccacccagt tgcaaagcca ccggattctc gctcggatca
     4021 tattccaaca aatcatattt ggcgtgaata atcgccgggg cggtgatcat ttcggtataa
     4081 agcaaggctt gacgactaaa ttggcgatga aaatagcggc agtgacgggt tgtccaatct
     4141 aacattggag caaccgaaaa acgtccacgg taaaaaggtt gaatttcgtt agtcataaaa
     4201 atatcaaaat aaagcggtaa aaaatcagta aaaaataacc gcttgtaagc gattcaaaac
     4261 aagcagccat catactcgaa aaagccagat aaacatagtt tcctcaaggc ttccccatct
     4321 atctgcgcac ttttaaaaca accttaaaac acaatatata gtgtttcaac atcaaatcac
     4381 acacaacata ttgaagcaaa aatttacaaa attatttttc tttataaatc aataagctac
     4441 caaagaccaa taaaaaagag tgtttgtcaa gacttgtctt gaaacttttt ttgcatacaa
     4501 tcatctacca gttccaaaca taaactttaa gatagagcct acgaatatgt ctagaaacct
     4561 cttccaaaaa cgcttaaata ttaagccgta tgagtatcct gagcttcttg aatttaaaga
     4621 tgcaattcgc cattcttact ggttacacac cgaatttaac ttcaccggcg atattcaaga
     4681 ctatcgcacc accattaacg atcacgaacg tcacgtgtta acccgagcaa tgcttgcgat
     4741 ttcacaagta gaagtgaatg taaaacgttt ctggggcgag ctatactgct atttcccaaa
     4801 accggagatg gacgatgtag gcggtacttt tgctgaaagt gaagttcgcc ataaagatgc
     4861 ttactcgttc ctattggaaa aattaggcct aaatgaaatg ttcagtcaaa ttcatgaaat
     4921 tgaaccatta atgaaccgca ttcgttatat ggaaagtttt atgaaagata aagatgctgg
     4981 caaaggcgaa tttgttttat cgttagtgct gttctcttta tttgttgagc atatttcatt
     5041 gtttggacag tttattatca tgatgtcgtt caacaagcat aaaaacctgt ttaaagggat
     5101 ttccaatgcg gttgaagcca cctcaaaaga ggaagaaatt cacggtaaat tcggaattgc
     5161 gttatacgaa attttacgtg acgaacacag tgaactattc acaccagaat tttttgaaga
     5221 tttgcaaacc ttggcaaatc aagcgtttga agcagaacgt ggcatcttag actggatttt
     5281 cgaagaaggt gatttaagct ttatcaccaa agcgacggta gaaaattaca ttaaaaaccg
     5341 ttacaacaat tctttaagca ttttagggtt agagccgcca cacgacatcg accctgaatt
     5401 attaaaagag actgagtggt ttgatattga aattctttca accaaagaaa ccgatttctt
     5461 taacaaacgt agcaccgatt attctaaaaa aatgaaacag attaccgcag atgacttatt
     5521 ttaatacaga ccgcccggac ttccactggc ttaatgaaga cagccgttta ttcttacaac
     5581 gtggctattt attggaagga acaaccgcat tagaccgcat tcgttttatt gccgaacacg
     5641 cagagcgaaa actcggcatt gaaggctatg ccgataaatt ctatcactat atggcaagag
     5701 gctacttctc gctttcttcg ccaatttggt caaactttgg cttagatcgt ggcttaccga
     5761 tttcttgttt cggtagctac atcggcgact ctatccatga aattatggtg actaccgctg
     5821 aagtgggcat gatgagtaaa attggcggtg gtacttcggc ctactttggc gatattcgtc
     5881 cgcgtggctc gttaattaaa aacaacggta aatcagacgg ctcatttaac ttcagtaaat
     5941 tatttgacac tgtgattgac gtgatttcac aaggaacatc acgcaaaggt cagtttgccg
     6001 gttatattga tattgagcac ggcgatattg acgaatggct ggatattcac accgaaggca
     6061 acccaattca attaatgtat tacggtgtgt gtgtcggtca cgattggtta gagtcaatga
     6121 aagccggcga tccatacaaa cgtcagcttt gggcaaaatt gttacaacgt aaaaccgaaa
     6181 ccggtatccc ttatttattc tttaaagaca atgccaacgc aggtcgtcct gatgtatata
     6241 aagataaaaa tatgacgatt cacgcctcta acttatgtac tgaaattatg ttgccttcca
     6301 gcaacgaaga aagtttcgta tgctgtttat cgtctatgaa cctactctac tttgatgagt
     6361 ggaaagatac cgatgcacca gaaacattaa cctatttcct cgatgttgta atgagtgaat
     6421 ttattgagaa aagtcaatca attccattct tagaccgtgc aaaccgcttt gcccgtcgcc
     6481 atcgtgcatt aggtttaggc gtgttgggct ggcacagcta tctacaggca aataatattg
     6541 cctttgacag cttccaagcg atgcaaaaaa acaacgagat tttcaaaacg cttcaagcaa
     6601 aaaccttgaa agcctcgcaa gaattggctc aacgcttcgg cgagccggaa attttagagg
     6661 gctatggtcg ccgtaatact acattaatga gtattgctcc gactaaatcc agtagcttta
     6721 ttttaggcag tgtgtcgcca tcggtagagc cgtttaaatc caactactat gtaaaagatt
     6781 tagcgaagat caaaaccgtg tataaaaacc cgttcttaga gaaattactc caagaaaaag
     6841 ggctagacac cgaagaaatt tggacgtcta ttttacaaaa tgatggctcg gttcagcatt
     6901 tggaacagct ttccgagcac gaaaaagaag tatttaaaac ctttgccgaa atcagccaat
     6961 taagcgtgat tcagcaagct gctcaacgtc aaaaatatat tgaccaaggg caaagtatta
     7021 atgtgatgat ccacccagcc acaccggctc gtgatcttaa ccaattatac ttaacagcag
     7081 aagagctggg cttaaaatcc atctactacc aaaactcaat gagtgcagca caggtattta
     7141 accgtaacct attaagctgc tcaagttgcg aagggtaaat aatgggaaat ttatcgcata
     7201 cttcacctaa tactattgtt gaagttgttg gtgaatttcc tgaaataaca tctagtgggt
     7261 atacctttga taaaggtcct attcaattaa gaatcggcaa acatactgct ccaaataaag
     7321 gctttggtgt aaagcatatt gaagccgagc atatgcaaga aattcttaat ctaggattta
     7381 catcagttaa tgaatttgtc aaagctatca tagtagaaaa cgctaaaatt ttttgcgaat
     7441 tctcagattt aaaaggcaat catcgcccta ttattctgaa agcaagtatt ggcattgtgg
     7501 ttctagagcg taagtttttg gaaagcggta cgatatattc agttgtaacc gcttatagaa
     7561 gaacaaatcc tcacggaata caaataggca ctatgaaata aagtacgtta gtgttataat
     7621 cagttccacg caagagcatt tgtagaaaat aacaggcgga tttggttttc tactgtgggc
     7681 ggcaggtttc cgctaacctg taatagctat ttaattttta tattaaatcc tgaacttgaa
     7741 acagactaag ggattgctgc ggtagctaag aatacaaacc tctctataat catatagaga
     7801 ggttttttct tattgatgag cacaagttaa gataattatt tactctcccg acataacttc
     7861 aaggtagctt gaatcagctc aaaagctatt gtgccttgtt gtgggatttc aggtaagctt
     7921 tcctcacagt cgaaccattt tgcatcgcag atttcttctt cctgtagctg aatttcaccg
     7981 ctttcataat ccgctaaaaa acctagcatt aatgaattgg gaaacgccca aggttggctt
     8041 ccaaaataac gcacattttt cactttaatg cccgtttctt caaacacttc acgatgcacc
     8101 gcagtttcta ccgcctcacc ggcttcgaca aaaccggcta aagtggtata aattgtgcct
     8161 ttatggcgta gatgattggc tagtaggatt tgtctgcctt ttcgcaccgc cacaataatt
     8221 gacgggctaa tcgttgggta agctcgattg ccacacgcat tgcagtaaat tgcaatttca
     8281 tcgcttgcca gtatggtttt ctcgccacat tttccgcaaa attggtgagt ctgaaagaaa
     8341 tggttaagcg aaacagctcg atgcaacaaa tgagacagtt cgggtggtcg gttaatttgg
     8401 cttcttaaat aagcaaactc tcgctgatta tccgattcta acgccttcac caaataagcc
     8461 ggcgagcctt gatattgccc gatggttaat ttctcacgtc cacttaagcc cagctcttcc
     8521 gcacttccga atggaatttc cccagcctcc aaggcaatat caaaatcgct gacgataatc
     8581 caatatcctt tattcatctt tcaatcctaa ttgtgtaaac aacttacgtt tttcattttc
     8641 agatagcact tgaaactcac cacagcctaa attgcctaat ctaaactggc ctatcccaac
     8701 acgaattaac cgtaaagtcg ggaaaccgat atgtgcagtc attcttctga cttggcgatt
     8761 tttcccttca gaaataatca attctatcca gctggtcgga atggttttcc gctcacgaat
     8821 ttgcggggcg atattccaag caaaatcggg cgttgctatt gctctgactt tcgcgggctt
     8881 ggtcaaacca tcttttaact ccaccccttt tgctaatttg gcaagatctt ccggttgtgg
     8941 aacaccctcc acttgtaccc aataggtttt ctgcttgtca aatttcgggt gagctaaacg
     9001 gtgctggatt tcgccattat tagtcaaaag caacaatcct tcactgtctc tatctagccg
     9061 cccgaccggg taaatattgg gcatcgtaat aaaatctttt agcgtttttc gcccctgttc
     9121 atcggtaaat tgggttagta catcataagg cttattgagt aacacaaggg tggtttccgc
     9181 aaaggtaagc ggtcgttttt gcggattttt ttgcaaattt ttagcgaaat ttgaccgctt
     9241 gtttgtcatt cttttaaagg ttggttgttt cattttttca ggttcgccca cgcaacagaa
     9301 agtaaaataa ttaagccacc gataatcatt ttaagggttg gcacttcatt aaagcaaagc
     9361 cacgcgatca caatcgcata caccggctcg agggaaataa tcattgaggc agtacgggcg
     9421 ttgatggtat caaggcttga aataaacagc gtataggcaa gggttgtaca taaaaaaccg
     9481 atacagaaaa tccaaaacca atcttgggtg gaaacgcttg gaaattcagt gatggagaga
     9541 ggcaacagaa aaagtgtagc aaaaatatac tgccaccagc ttgcttgcac accggaaatt
     9601 ttgctcatgg tacggcgatt cgctaccgcc aaaataccat acaccaaagc agataacacg
     9661 ccccacaata aaccttgagt ggcttgatta ccaaaagtaa attcaggggt aactaaaatt
     9721 aaaccaaccg tgatggcaat taatagcacc acttcacgaa agcgtaattt ttcacggaag
     9781 aacaggcttt caaataacgc cacaaatgcc ggaaagctgg caaagcctaa ggttgctacc
     9841 gccacaccac ctactttaac cgccacaaaa aaagtaaccc agtgggcagc taataaagct
     9901 gcagaaaatg caagttgagc catttgctgt aagttgagct ttacaagcgg ttgttttttc
     9961 cataaaaaat acaaagagat gatagcaaaa gcaatcatca ctcgcccaag cacaatggtt
    10021 tcagccgagc tttgaattaa tgctccgaag atccccgagg caccaaataa aaccgctgtg
    10081 ccgtgtactt taagtagtgc aagtgttctt ttctccacta tttgatccta ttatgttgat
    10141 cttgctcgtc cggcttgcgt tcaaattctg catcaaacgt gttgctatct tgcgcagatg
    10201 taacagaaaa agacgaagtt tgggcggtaa aatgcataaa caccttattc tttacgctat
    10261 taattacgaa ggcttgaatc cattttcggc taaagggtaa cacgcataaa atcgctaaaa
    10321 tatcacttaa aaagccggga ataatcagca aaatgccggc tacaataaac atcaccgagt
    10381 tgccgactgc ttcagtcggt atcttgcctt ggcttaaatc ttgcttgatg gaaaagaggg
    10441 tataaacgcc ccttaacttc acaatccata accctaaaaa tgaaatcacg accagtaaca
    10501 aaatcgtggg taacacgcca atgatcgagc caatattcac cagcagcgaa atttcgcaat
    10561 agatataaaa gaaaatacca aacagaatcg ctaaaatagg catattatcc tcccaacgtt
    10621 gcggcagcgt ttgccgtcag attttctgcc ccattggctc gcatgacaat attgtcttcg
    10681 gtacgaatcc cgccaaaggc tttgaaagcc tcaattttct gccagttaaa ggcagaagat
    10741 aaggcactgt ttttccaagg cttaagtagc atctcaataa aataaaaacc cggctcaatg
    10801 gtaagcacca tattttcctg tagctcacgg gtacaacgca aacttgggta aacctctgga
    10861 ggagctttat ggctgcctcg ggcattttgc tgaaaaccgc ccacatcgtg cacttgaata
    10921 cccaataaat gccctagtcc gtgtgggaag aacgtacggc taatcccttg ttcaaaaatt
    10981 tgctcggctg aaagatgaat aaattgatgt tccgctaata attgcgaaat catctgctgc
    11041 attcgggtgt gataatgcag gtagttcacc ccaatactca gctcagcaat aatctgcaac
    11101 ttcaactgtt ccattttcgc caccagctcg gcaaattcag aaccgctgtc aaaggcatag
    11161 gtgcgggtga gatcggaggc ataaccattt accgttgtgc cggcatcaat taaaaaactg
    11221 tggcgttttg cgtgggtgtc aaaatctaac gccgtataat gtagcaccgc accattttga
    11281 ttaatcgcca caatattgcc ataaggaaca ttgagatcag attgctgcgt cgctttcaaa
    11341 tattcaaggt tgatttcaaa ttcgcttttg ccggcaaaaa atgcctcttt tgctacttga
    11401 tgccctttta aggctgaaaa ttgggcttgg taaatacttt caatttcaaa ctccgttttg
    11461 atggagcggg caaaattcag gctattcagc actttctgcg gattaatatg gctaaagcct
    11521 aactttttgg ctagctcaac atcttcaccg ataaaggcac aagcggtcgg attttggata
    11581 aaggttgcaa tttcattctc tgctctcaac aaaacccact caaattccgc agcgaaaaag
    11641 gcctccgttg gcacttttag agtggaaacc caataatctt caggggcata aaaatagatt
    11701 ttcggcttat ttttgccatc taaaaataac cagcaatttt cagcttgggg atatgggaaa
    11761 aagtaattaa aataagggtt aattttaaac ggggcggttt gatcgtctaa aaataaggtt
    11821 tttgccttgc cggcataaat ccataaaccg tctaaaaagg cattttccag caagctttgc
    11881 actgtctgtt gcaaacgtgc gagatgcgta gagaatagat ttttcataag gaataaaatg
    11941 actcaattaa ctgtaaataa agaattagat accttggggc tacgttgccc agagccggtg
    12001 atgctcaccc gtaaaacaat ccgtaatatg gaagagggag aaattttgca tatcatcgcc
    12061 gatgacccgg ccactacccg tgatattccg agtttctgcg aatttatgga tcaccaatta
    12121 attcaaaaag aggtggactc caccccatac cattactgga ttaaaaaagg cttggaataa
    12181 accacaagcg gtcgatttta gccataaaat tgcaaattta tgcacaaaat cgaccgcttg
    12241 ttttaattaa tgacggcgag gttcgtcctc aaaatcgtca ttttcatcat cgaaaaattc
    12301 accgtcatcg ccgtactcat cttcatcagc attcggatct tcaaagtagg ttccccagcc
    12361 ctcatactcc gcaccggctt tttcaattaa tggcagtaac tctttttgtt gtgcggtaat
    12421 gagatccgca ttcaagtgaa tttcgctcac aatgtcgcat acaaaaatca ctttaccatt
    12481 ttcgtcttcc acttcttccg cttcggaaat ttcatagccc agcttatagg catcaactac
    12541 taatttttcc aatttatcaa aatcgtggtg agcaacgtgg tgttcaataa tataaagggc
    12601 ttcagggtct gaaccatcgg ctaataatga tgaaatggtt tcatcggttt ctgtgcgtaa
    12661 ttcatcgaga ttgtacatat tgaattcctt acttattctg tgattaattt tggtgcaaac
    12721 cagctatcta atttgttcga cagcttatca ataccgattt tattcagtgc ggaataagcc
    12781 tctacttgga tatcaccttg gaatggtaaa atcgcttctc ttaccatttt tacctgctta
    12841 gagcgtgccg attggcttaa cttatccgct ttggtcaaca gcagtaacac cggcaagttg
    12901 gctgacactg cccattcaat catctgttga tctaaatctt tcaacgggtg gcgaatatcc
    12961 attaaaatca ccacaccgcc taaacattca cgcttttgta aatactcgcc taatgctttt
    13021 tgccactgga ttttcatctg ttcaggtact gctgcatagc catagccagg taaatccact
    13081 aatttacaat tcgtttcaac cttaaacaag ttaatcaact gcgttcgccc cggtgttttg
    13141 gaagttcggg ctaaactttt ttggttagtt aaagcgttca aagcagtcga tttaccggca
    13201 tttgaacgcc cggcaaaagc aatctccaca cctgtatctt caggtaaatg acgaatatcc
    13261 ggtgctgaag ttaaaaaatg ggttttatga tagtttaatt tcattttatt ctctaaattt
    13321 aaaagataag ccttgctcgc catattgatt cggttcagga ttaccggcaa atacacccca
    13381 ttctaaaaag agcaacattc caataaatgc cggcatcacc tgtccaagca atatctgcat
    13441 aattccttgt gaataaggag ctgcaagata acaaataatc ggcactaatg ccattaacag
    13501 ggcttttgcc gaacgatttc ggtcgtgtaa tcgtttaata ataatagcag acaggctaaa
    13561 tcctgtaatt ataagcggta gcacactcaa taaagacaat tcagccaaat ttatccacat
    13621 agcaaccata aacaggaaaa gaaagtggat tccaaatcca atccaaaaac ctcgtctatt
    13681 tagcctaccg ttaaaactaa aaagtgcttt ataccaactc attttctacc ctaaagctac
    13741 atcaagtacc atcattacta caaagcctaa catcaggctt aaagtcgcaa tatcagtatt
    13801 tcccgaactt tgcgattccg gaatcagttc ttctacgacc acaaaaatca tcgctccggc
    13861 agcaaaggca agagcataag gtaaaatagc cgtcatcgac agcacaaaaa ccgccccaat
    13921 caccgccgca ataggctcaa ccactgctga catagagcca taccaaaatg ctttcttccg
    13981 actatgccct tcgcctcgaa ttggcaatac aagtgacgag ccttcgggaa tgttttgtaa
    14041 ccctattccg attgccaaac cgatagctcc cataatggaa gcatctacgc ctgaaacttg
    14101 ggttgccaaa gcaccgaaag ccacccctat ggctaatcct tctggaatat tatgaatggt
    14161 aatcgcaaga aaaagcaaag tagattttga taagccttgt ttaagttgat catttccttc
    14221 agcttgctca atcggcttac tcaagtgcaa atgcggcaca acatagtcaa ttaatcgaat
    14281 aaaagctcca ccggcaagaa agccaatcgc tgcaggcagc caagctaaag agccataatc
    14341 cgcctcggca tattctaaag aaggtgcaag caaagaccaa aacgaggctg caatcattac
    14401 acctgcggca aagcccatca tactgtctaa taattttcga ttaaccgatt taaaaaaata
    14461 gacaaatgac gaaccgaaaa tcgtacaacc ccaagtaaat aaacccgcta aaaaagcttg
    14521 ccatattgga gaaagtgaaa ggaaatattc aaacaagaaa tagtaccagc taaaataaat
    14581 attggctcat tctatcaaag attcagggtt attaatatag tgtagccaaa ggctcaacga
    14641 agatttcact tgtaaaactt agcaagaaaa taaccgcttg catttccctt tcataaatac
    14701 aatgaaaatc ctaacaagcg gtcattttcc gtgagttttt tacctttacc acaacaacaa
    14761 aaaaccgcct gtatctctac aggcggctct ttcttggatt acttgtactt tgtttatttg
    14821 tacttatttt gcttttgctt aagttttcgc ttttgtaact tttagctttc gcttaagctc
    14881 gcttaaatta aaacccgacg atgctctact ctcacatggc gaatcaccac actaccatcg
    14941 acgttactgc gttttacttc tgagttcggt atggggtcag gtaggaccac agcactcttg
    15001 tcgtcgggaa aattcttttc tatttttgaa tttctttaag ttaacttcct aatctaactc
    15061 ttagttcact ttaatagtta gattaacttc cttaacttcg attgatttct tctctagttt
    15121 cgttcttctt ctcaatacaa aaacaagcct aaaaacattt gagcgttgta tagttaagcc
    15181 tctcgggcaa ttagtactgg ttagctcaat gtctcacaac acttacacac ccagcctatc
    15241 tacgtcgtag tctccaacaa cccttacaca cttatagtgt gggagaactc atctcgaggc
    15301 aagtttcgtg cttagatgct ttcagcactt atctcttccg catgtagcta cccagcaatg
    15361 cctctggcga gacaactgga acaccagtga tgcgtccact ccggtcctct cgtactagga
    15421 gcagcccctc tcaattctcc aacgcccacg gcagataggg accgaactgt ctcacgacgt
    15481 tctaaaccca gctcgcgtac cactttaaat ggcgaacagc catacccttg ggacctactt
    15541 cagccccagg atgtgatgag ccgacatcga ggtgccaaac accgccgtcg atatgaactc
    15601 ttgggcggta tcagcctgtt atccccggag taccttttat ccgttgagcg atggcccttc
    15661 cattcagaac caccggatca ctatgacctg ctttcgcacc tgctcgactt gtctgtctcg
    15721 cagttaagct tgcttatacc attgcactaa cctcacgatg tccgaccgtg attagcaaac
    15781 cttcgtgctc ctccgttact ctttgggagg agaccgcccc agtcaaacta cccaccagac
    15841 actgtccgag accgcgttcc gcaatcttcg ttagaacatc aaacgttaaa gggtggtatt
    15901 tcaaggacgc ctccacaatc actggcgtga ctgcttcaaa ggctcccacc tatcctacac
    15961 atcaaaattc aatgttcagt gtcaagctat agtaaaggtt cacggggtct ttccgtctag
    16021 ccgcgggtac accgcatctt cacggcgatt tcaatttcac tgagtctcgg gtggagacag
    16081 cctggccatc attatgccat tcgtgcaggt cggaacttac ccgacaagga atttcgctac
    16141 cttaggaccg ttatagttac ggccgccgtt tactggggct tcgatcagga gcttctcttg
    16201 cgataacacc atcaattaac cttccagcac cgggcaggca tc
//
LOCUS       DANMCL010000066        16229 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.066, whole genome shotgun sequence.
ACCESSION   DANMCL010000066 DANMCL010000000
VERSION     DANMCL010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16229
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.066"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..370)
                     /locus_tag="PXF40_001854"
     CDS             complement(<1..370)
                     /locus_tag="PXF40_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase family
                     protein"
                     /protein_id="HDL5803173.1"
                     /translation="MKSLVIKLFGTKKEKKTFKFSKIESVLLKPIGDAIGDAVVHIAH
                     LEQIKKALPNVKIAVLVTSRNKLIFSQANVVDMILEDKVSTYLSQRGHWDLYLDFKPT
                     FTTKSIILDSILKPKFIINFG"
     gene            418..1449
                     /locus_tag="PXF40_001855"
     CDS             418..1449
                     /locus_tag="PXF40_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HDL5803174.1"
                     /translation="MNIKATLRKARLVIGKAILDSKNTDLILSEIPNKILFLRHDGKI
                     GDYVVSSFVFREIKKQSPQTQIGVVCSQKNRYLFENNPYIDKLYLVKTKSIPDYIRGG
                     KQLAKEQYDVVIDPTVTLRNRDLLFLRTISAKHYVGYQKQKYRLFDLNVEDRKQHFSE
                     IYQDALALIGFENIETQYDVPLNATSNQSIKHYLYENQIRNYIALNLFGAGSARRFSE
                     QKINELLSCLKQHSDKPIVLLTFPEVTAKLCSFTKKYKNIFVYEKTKSVFDSIELIRF
                     ADLLISPDTATVHIASGLSKKIIAFYSSDEQNFIHWHPNNQAETHILRFRKSVNDLDF
                     AAIKPEWLK"
     gene            1451..2341
                     /gene="ilvY"
                     /locus_tag="PXF40_001856"
     CDS             1451..2341
                     /gene="ilvY"
                     /locus_tag="PXF40_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HDL5803175.1"
                     /translation="MDFQSLKLFLDIAQSRSFIRSAEKNYMTASTLTRHIQRIEEELG
                     QPLFLRDNRQVRLTEAGERFLAFAQQGWAEWQQLQNQLSPAQGDLEGELKVFCSVTAS
                     YSHLPPILGKFRQKYPKVDIKLSTGDPALALEQVQSLAADISVAGKPEFLPNNIVFHY
                     IDDIQLSIIAPRVASQATQFLQQSPIDWKNIPFILPVNGPVRKRIDRWFKEQKIKDPI
                     IYATVSGHEAIVPMVALGFGVALLPDIVIKHSPMNNQVSYVNLPSPITPFELGICVQQ
                     KRLQEPIINAFWQLLSDNSA"
     gene            complement(2475..4877)
                     /gene="lon"
                     /locus_tag="PXF40_001857"
     CDS             complement(2475..4877)
                     /gene="lon"
                     /locus_tag="PXF40_001857"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HDL5803176.1"
                     /translation="MAPRKKKAIELPLLPLRDVVVFPYMVMPLFVGREKSIQALRSAM
                     DSNKQLFLVTQQDPNKEEPNAEDMYGVGVIANIIQMLNLPDGTVKVLVEGQTRAKIEQ
                     IHDDENGFWAAIQPIYSEYDDENEELKAIAKTTLTEFENYVKNNKKIPAEIIAKLQKI
                     TLEDRLADTIASNLIAPVKKKQELLEQPNLIARFEALLIAMATEMDTLETETRIRNRV
                     KQQMEKNQRDYYLNEQIKAIQKELGNGDDVEQSELDKLKEKIDAAKLPTEVKDKLNTE
                     FKKLKAMPQSSSEATVVRGYIDWILQMPWHKKSAVKKDLAQAQEILDKDHYGLERVKE
                     RIVEYLAVQSRLNKLKGPILCLVGPPGVGKTSLGQSIANATGRKYVRMALGGVRDEAE
                     IRGHRRTYIGSMPGSLMMKMAKVGVRNPLFLLDEIDKMAQDMRGDPASALLEVLDPEQ
                     NKAFNDHYLEVDYDLSDVMFVATSNSMNIPPALLDRMEVIRLSGYTEDEKMHIARGHL
                     LAKQQENNGLKEGELTIEDSAILSIIRYYTREAGVRSLEREIAKICRKAVKALVLDKK
                     LKSITVSEKNIEEYLGVKRFDYGKMDSQNRIGEVTGLAWTEVGGDLLTIETASVAGKG
                     KFSYTGSLGDVMKESIQAAMVVVRSRAEKLGIAEDFHEKRDIHVHVPDGATPKDGPSA
                     GIAMCTALISSLTGNPVRKEVAMTGEISLRGKVLPIGGLKEKLLAAHRGGITTVIIPK
                     ENEKDLEEIPENAKAALDIHAVETIDEVLALALENPPMGIEILSKAEIKVKKSRAKAT
                     VQ"
     regulatory      5081..5199
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            5375..6472
                     /gene="ribD"
                     /locus_tag="PXF40_001858"
     CDS             5375..6472
                     /gene="ribD"
                     /locus_tag="PXF40_001858"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HDL5803177.1"
                     /translation="MTDVQYMAYAITLAEKARGWTSPNPLVGCVIVKNGNIIAEGYHQ
                     KAGSWHAERNAILNCEEDLTGATAYVTLEPCCHHGRTPPCSELLIERGIKKVFIGSRD
                     PNPLVSGKGAAQLRAAGIEVVEDFMRTECDALNPIFFHYIQTKRPYVLLKYGMTADGK
                     IATYTGNSKWITGEAARANVQKSRHEYSAIMVGVETVLADDPMLNSRMENAKQPVRIV
                     CDSQLRTPLDSQLVQTARQYRTIIATLNNDAKKQAEYTACGVEILVTGERDKRVDLAD
                     LLQKLGELGIDSLLIEGGSQLNFSVLEQGLVNRVHCYIAPKLIGGKAAKTPIGGKGIG
                     ELAQAVKLRLKSTELLGEDILLDYEVDLLRN"
     gene            6689..7336
                     /gene="ribE"
                     /locus_tag="PXF40_001859"
     CDS             6689..7336
                     /gene="ribE"
                     /locus_tag="PXF40_001859"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HDL5803178.1"
                     /translation="MFTGIIEEVGQIAQIKKQGEFVVVTVKAKKILTDVHLGDSIAVN
                     GVCLTVTSFTQEQFTADVMSETLKRTSLGELSINSSVNLERAMAANGRFGGHIVSGHI
                     DGTGVVAEITPADNSTWYRIKAEPKLMRYIIEKGSITIDGISLTVVDVDAESFRVSII
                     PHTIKETDLGTKKIGSLVNLENDIVGKYIEQFLLKKEPENPQSKITADFLKNAGF"
     gene            7355..8554
                     /locus_tag="PXF40_001860"
     CDS             7355..8554
                     /locus_tag="PXF40_001860"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HDL5803179.1"
                     /translation="MFKFSTVEEAIQAIAQGKIILVSDDADRENEGDFICAAEFATPE
                     NINFMAKYGKGLICTPISTEIAKKLNFHPMVLENEDNHQTAFTVSVDHIQTGTGISAF
                     ERSLTCLKMLDENAKPEDFRRPGHVFPLVAKDGGVLVRNGHTEATVDLARLAGLKPAG
                     LCCEIMAEDGTMMQMPELQAFAQAHNMPFITIQQLQEYRRKHDSLVNVVSVVKMPTKY
                     GEFKAHSFVETISGKEHVALVKGDIGDGENVLCRIHSECLTGDAFGSQRCDCGQQFAA
                     AMNQVEQEGRGVVLYLRQEGRGIGLINKLRAYELQDRGMDTVEANLALGFKDDEREYY
                     IAAQMFEKLGVKSIRLLTNNPAKIEGLIEQGLNVVAREPIMVEPNEHDLEYLKVKQHK
                     MRHMFNF"
     gene            8760..9224
                     /locus_tag="PXF40_001861"
     CDS             8760..9224
                     /locus_tag="PXF40_001861"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HDL5803180.1"
                     /translation="MATFQGNYIATGLKFGIVATNWHKIFIDQLLNGATDKLLRHGVE
                     EKNIDTVWVPGALEISIAAKKMAQSGRYDAIICLGAVVRGATSHYDVVVNESAKGISS
                     SALETGVPIINGILTVENLEQAIERSGTKAGNKGEECAMVAIEMANLLKALA"
     gene            complement(9270..10778)
                     /gene="lnt"
                     /locus_tag="PXF40_001862"
     CDS             complement(9270..10778)
                     /gene="lnt"
                     /locus_tag="PXF40_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HDL5803181.1"
                     /translation="MNFAKNPPFLTACLLAIILGAIGTFAYSPFDIWILAFASAAGLV
                     WSATLANRKTALWATFAWSIGYFCTGVNWVSVSMTQFGGVPTIVSYIAVFLLACYLAI
                     YNLLFSVVSHRLKLNNPFALAAIFTFTEYLRGVVFTGFPWLQFGYSLIDSPFAGIAPI
                     LGVEGLTFLVIVASSYLVKIIQQENKTVPSLMVLAVIFGLSFATRFLQFVQIDTEKQP
                     LVVSLVQGNIEQKMKWDPQHFNHSVRTYEQLILPLLGNSELIILPESAIPALENQISP
                     LLGSLDHLARQHGSEIIIGTLYQNEQEELFNSSVLLGEKEREYALHSNPRYNKHHLVP
                     FGEYVPFGSVLDWMREVFILPINLSQGSFVQPSFLAKNNRFNMAICYEIIFGDQLQQN
                     QKSQNSDYLLTITNDAWFGSSIGPWQHFQMARMRALELGKPLLRAANTGITAIVDANG
                     KVIEQLPQFTADALTATIVPTKGDTPFKQLGHWLIYSFSLFCVIASLLLRRK"
     gene            complement(10837..11736)
                     /gene="corC"
                     /locus_tag="PXF40_001863"
     CDS             complement(10837..11736)
                     /gene="corC"
                     /locus_tag="PXF40_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249295.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HDL5803182.1"
                     /translation="MSDEQQSVNTTEKSEKKSILHSLFSGLFQNEPKNREDLVEVIRD
                     SVENELIDSDTKEMIEGVMEISELRVRDIMIPRAQIVFIDANEPLDVCIDLIIESAHS
                     RFPVIRGEKDTIEGILHSKDLLKYLRSDSEPFNLQQVLRPAVIVPESKRLDRMLKEFR
                     SERFHMAVVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEVKPIRQLSRHTYAVLPL
                     TDIKKFNEFFATDFNDEEVDTIGGLVMQAFGYFPKRDEQIELNGIDFKVTSANSRQLI
                     QLRVTLSDEQLEKMEKTSPNEEE"
     gene            11874..12482
                     /locus_tag="PXF40_001864"
     CDS             11874..12482
                     /locus_tag="PXF40_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HDL5803183.1"
                     /translation="MKLTKIALSLTALVVSSMSVAGTLSTSSMVDILAFDGQRVKSGT
                     TSVQMSENKTHQVVVEVGGTVEGDFFTSDQIILTFQGSAENAKLETPRLNSKLDLRKF
                     QENQTVAIKTDSGKVISHKQDFLKGEGFLAKTRVEDNLTKYNLAKKTASVEQFATAPL
                     EAKGQIVVDTNKVSQEELQLLFRKADKDTQKRFLEWAKKNIK"
     gene            complement(12563..12946)
                     /locus_tag="PXF40_001865"
     CDS             complement(12563..12946)
                     /locus_tag="PXF40_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803184.1"
                     /translation="MKTLKLGCIFSLALMLSSCTLTPEQQAERKAKQIRAEQDLQVQL
                     AKQCDVETAELMYQQFNPPLSQTEQEEKAFKKRYAEKVNAPMFQACYKLAWQNYKAQV
                     ELEEIRWNYDRDYMYRGWRYCYYCW"
     gene            complement(12976..13545)
                     /locus_tag="PXF40_001866"
     CDS             complement(12976..13545)
                     /locus_tag="PXF40_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HDL5803185.1"
                     /translation="MNETTINDFSLLCRLFGNLFYRHPTDPILAGTFNWLAQGGLRQV
                     WALNTDSQSENALTLLQKNANPTQLAASYQALFAENGAISPTISAYGLSVNNFVAFRQ
                     ERAMPELENADHIGLLFLTASWIEDNLDSALAQKILFEQFLLPCAGKFLGKIEAFDNG
                     FYKALAQLSRDALSAMADELEESELEAVE"
     gene            13604..14449
                     /gene="nfo"
                     /locus_tag="PXF40_001867"
     CDS             13604..14449
                     /gene="nfo"
                     /locus_tag="PXF40_001867"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HDL5803186.1"
                     /translation="MKYIGAHVSASGGVENAVLRSVEIGANAFALFTKNQRQWQAPAL
                     KAETIEKFKRFCKVHHFSAEQILPHDSYLINLGNPEAEALEKSRVAFIDEMSRANQLG
                     LKLLNFHPGAHLKQISEQDCLARIAESINIAVEKVPNVIAVIENTAGQGSNLGWHFDH
                     LATIIEQVEDKSRVGVCLDTCHLFSAGYDISSYEKSEAVFNDFNQTVGFHYLRGMHLN
                     GSKTPLGSRVDRHHTLREGTIGTEVFAFIMQNMHFNHIPMILETISPEIWADEIKFLR
                     TLELK"
     gene            14577..15149
                     /locus_tag="PXF40_001868"
     CDS             14577..15149
                     /locus_tag="PXF40_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5803187.1"
                     /translation="MKKNLFATTFKPVFIASILSVFGGYSSIAVASLSSKPATPNQII
                     ASKAERLAKSSSVFTNRANLPTSSAHTANYSGRINSVYHNWVGTRYRLGGTTKAGIDC
                     SAFVREVMGKAFSKDMPRSTAEQRHVGHSISKSDLRPGDLVFFRKNNHVGVYIGNGKF
                     VHASSSRGVTTSSLSESYWSRNYTQSRRVI"
     gene            complement(15216..15674)
                     /locus_tag="PXF40_001869"
     CDS             complement(15216..15674)
                     /locus_tag="PXF40_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5803188.1"
                     /translation="MASIRQISDQTAAYQPIPLYRDFNSSRSVKLDLNSLCIKRPRDT
                     FFIHVKNPNLIAWGIELDDLLIVEQTNQYLVNDLLVLEKDGEYKFYQFFNEIQNGEGI
                     AEKILFSLDVSESNLRITDWAEVKIAGVITNVVHQMRTRGAFTQAKQRVA"
     gene            complement(15848..>16229)
                     /gene="grcA"
                     /locus_tag="PXF40_001870"
     CDS             complement(15848..>16229)
                     /gene="grcA"
                     /locus_tag="PXF40_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HDL5803189.1"
                     /translation="IKGVQITESSNSNLLNSFWLLDEAKNEARCLAAKAGFEEDQVVA
                     ISELGDIAYREVPVNVAPTIKVEGGQHLNVNVLRRETLEDAIQNPEKYPQLTIRVSGY
                     AVRFNSLTPEQQRDVITRTFTESL"
BASE COUNT         4835 a         3149 c         3406 g         4839 t
ORIGIN      
        1 taccgaagtt aataataaat ttaggcttta aaatactatc taaaataata ctttttgtgg
       61 taaatgtcgg tttgaaatct aaataaagat cccaatgtcc ccgctgcgag agataagtgg
      121 atactttatc ttctaagatc atatctacca cgtttgcttg agagaaaatc aatttgttac
      181 gagatgtaac taaaaccgct atttttacat ttgggagagc ttttttaatt tgctccaaat
      241 gagctatatg cacaacagca tcgccaatag catctccgat aggtttgagt aatacggatt
      301 ctattttgct aaatttgaag gtttttttct ctttttttgt accaaaaagt tttataacta
      361 aggatttcat ctctataata ggttgattct tttaatgatt ggttatagta agtaaaaatg
      421 aatattaaag caacgttaag aaaagcaaga ttggtgatag gtaaagccat tttagatagt
      481 aaaaatactg atctgatatt atcggaaatt cccaataaaa ttctatttct tcgtcacgat
      541 ggtaaaattg gtgattatgt cgttagttcc tttgtcttcc gtgaaataaa aaaacagtct
      601 ccccaaacgc aaataggcgt ggtttgctca cagaaaaacc gatatttatt tgagaataat
      661 ccttatattg ataagctcta tttggttaag acaaaaagta ttcctgatta tattcgtggt
      721 ggcaaacaac ttgcaaaaga gcagtatgat gttgtaatcg atccgactgt tactttacgg
      781 aatcgtgatc tcttattttt acgcactata tcagccaaac attatgtagg ttatcagaaa
      841 caaaaatatc gattatttga tctaaatgta gaggatagaa aacagcattt ttcagagatt
      901 tatcaagatg cgttagcttt aatcgggttt gaaaatatag aaactcagta tgatgtgcca
      961 ctaaatgcca caagcaacca atccataaag cattatttat atgaaaacca aattagaaat
     1021 tatattgcgt taaatctttt tggtgcaggt tcggcaagac gttttagtga gcagaaaatt
     1081 aatgaactgc tgagttgctt aaaacagcat agtgataaac cgatagtctt acttactttt
     1141 cctgaagtaa cggcaaaatt gtgttccttt actaagaagt ataaaaatat atttgtctat
     1201 gagaaaacca aaagcgtttt tgattcaata gaactgattc gttttgcgga cttattaatt
     1261 tcacctgata ctgcaaccgt gcatattgcc tcaggcttga gtaaaaagat aattgctttt
     1321 tacagtagcg atgaacagaa ttttatacat tggcatccga ataatcaggc tgaaacccat
     1381 attctccgtt ttagaaaaag cgtgaatgat ttagattttg ctgcaataaa accggagtgg
     1441 ctaaaataat atggacttcc aaagccttaa acttttccta gatatagccc aaagccgtag
     1501 ttttattcgc agtgcggaga agaattatat gacggcttcc acacttaccc gccatattca
     1561 gcgtatagag gaggagctcg ggcagccgtt gtttctgcgt gataatcgac aagtgcgttt
     1621 aactgaagca ggggaaaggt ttttggcgtt tgctcaacaa ggttgggcag agtggcagca
     1681 gttgcaaaac cagttgtcgc ctgctcaagg tgatttagaa ggagagttga aagtgttctg
     1741 ctcggtaacg gcttcttaca gccatttacc gccgattttg ggaaagtttc gccaaaaata
     1801 tccgaaagtg gatattaaac tgagtaccgg tgatccggct ttggcattgg aacaggttca
     1861 gtcattggct gcagatattt cggttgcggg taagccggaa tttctgccga ataatattgt
     1921 gtttcactat attgatgata ttcaactttc gattattgcc cctcgtgtgg cgagccaagc
     1981 cactcaattt ctgcaacagt cgccgataga ttggaaaaat atccccttta ttttgccggt
     2041 gaacggacct gtacgaaaac ggattgaccg ttggtttaaa gagcaaaaaa tcaaagaccc
     2101 gattatttat gctaccgtct ccggacacga agcgattgtg ccgatggttg cactaggctt
     2161 tggggtcgca ctgctaccgg atattgtgat taagcatagc ccaatgaata atcaagtttc
     2221 ttatgtgaat ttaccctcgc cgatcactcc gtttgagctg ggaatttgcg ttcagcaaaa
     2281 acgcttgcaa gagccgatca tcaacgcatt ttggcaatta ttgtctgata attcagcata
     2341 acaagcggtt agattttgct aaatttttgc aaaaaataga gcaaaaccga ccgcttgtag
     2401 ataaaacttt cagataaaaa ataaggtgcg tgattgtgat ctgcgcacct tatgttgttt
     2461 tagattattg cactttattg cactgtggct ttagctcgcg attttttcac cttgatctcg
     2521 gcttttgaca agatttcaat ccccattggc gggttttcta gtgccagagc tagtacctcg
     2581 tcaatggttt ctactgcgtg aatgtccaac gctgcttttg cattttccgg aatttcctct
     2641 aagtcttttt cattttcttt cggaataatc accgtcgtaa taccaccacg atgggctgcc
     2701 agtaatttct cttttaagcc gccgattggc aatactttgc cacgcaagct gatttcaccg
     2761 gtcatcgcta cttctttacg cacagggtta cctgttaggc tggaaattaa tgcagtacac
     2821 attgcaatcc ctgcactcgg accatctttc ggtgttgcac cgtccggcac gtgaacgtga
     2881 atatcccgtt tttcgtggaa gtcttcagca atgcctaatt tttctgcacg agagcgtaca
     2941 accaccattg ccgcttgaat agactctttc attacatcgc ctaatgaacc ggtgtaagag
     3001 aatttgcctt tacctgcaac agaagcggtt tcaatggtta ataaatcacc gccaacttct
     3061 gtccacgcta aaccggtcac ttcgccaatg cggttttggc tatccatttt gccgtagtca
     3121 aaacgtttta cgcctaagta ttcttcgata tttttctcag aaactgtaat ggattttaat
     3181 ttcttatcca atactaaagc tttcacggct ttacggcaga ttttcgcaat ttcacgctca
     3241 aggctacgca cgcctgcttc acgggtgtag tagcggataa tacttaaaat tgcactgtct
     3301 tcaatggtca gctcaccctc ttttagtccg ttattttctt gctgtttagc cagtaaatga
     3361 ccacgagcaa tgtgcatttt ctcatcttcg gtatagcctg aaagacgaat cacttccata
     3421 cggtcgagca atgctggcgg aatgttcatt gagtttgagg ttgccacaaa cattacatcg
     3481 gataaatcgt aatccacctc taaataatgg tcgttaaagg ctttattttg ctcaggatct
     3541 aacacttcaa gcagagcaga agccgggtcg ccacgcatat cttgagccat tttgtcgatt
     3601 tcatctaaca agaacagcgg attacgcacg ccgactttcg ccattttcat cattaggcta
     3661 cccggcattg agccgatgta agtacggcga tgcccacgga tttccgcttc atcacgcacg
     3721 ccacctaacg ccatacgcac atatttacgc cctgtggcat tggcaataga ttgccctaat
     3781 gaggttttac caacccccgg cggaccaact aagcacaaaa tcggaccttt taatttattt
     3841 agacgacttt gcactgctaa gtattctaca atccgctctt tcactcgttc taagccgtag
     3901 tggtctttat ccaaaatctc ttgagcttgg gctaaatctt ttttgaccgc tgatttttta
     3961 tgccacggca tttgtaaaat ccagtcaata taaccacgca caacggtagc ttcggaagag
     4021 ctttgcggca ttgctttgag ctttttgaac tccgtattca gcttgtcttt tacctcggtc
     4081 ggtaattttg cagcgtcaat tttctcttta agcttatcta actcgctttg ttcaacgtca
     4141 tcgccattac ctaactcttt ttgaatcgct ttaatttgct cgttgaggta gtaatcacgt
     4201 tggttttttt ccatttgctg tttaacacga ttacgaatcc gagtttcggt ttcaagcgta
     4261 tccatctcag ttgccatcgc aattaacaag gcttcaaaac gggcaatcag atttggttgc
     4321 tccaataatt cctgtttttt cttcaccgga gcaattaagt tagaggcaat ggtatccgcc
     4381 aagcggtctt ccaacgtgat tttttgcagt ttagcaataa tttccgccgg aattttcttg
     4441 ttatttttaa cgtaattttc aaattcggtt aaagtggttt tagcaatcgc ttttaactct
     4501 tcgttttcgt catcatattc cgaatatatt ggctgaattg ccgcccagaa gccgttttca
     4561 tcatcgtgaa tttgctcgat tttggcacgg gtttgtcctt ctaccagcac tttaactgtg
     4621 ccgtccggca ggtttaacat ttgaataatg ttggcaatta cacctacgcc atacatatct
     4681 tctgcattcg gctcttcttt atttggatct tgctgagtga ctaaaaacag ttgtttattg
     4741 gaatccatcg ccgagcgtag ggcttgaatt gatttttcac gtcctacaaa taacggcata
     4801 accatataag gaaaaaccac cacatcacgc aatgggagta gtggtaattc aatcgctttc
     4861 ttttttcttg gtgccataaa tttgctctct ctatcaaaat ataatccccc attatgaggg
     4921 cgaatttggg aaaaacaagg gaaaatttga tttatcttaa aaaaactcga atagtcaaaa
     4981 cagtagatgt tggcgattta atcaattgtt aaaatcaggg taattagctt aatttcccgc
     5041 ttgacatcaa atcgtaatgc gagcaaaatc ccctgcatat tttaatcttc agggcagggt
     5101 gaaattcccg atcggcggta aagtccgcga gccgagcaat cggcaggatt tggtgaaatt
     5161 ccaaaaccga cagtatagtc tggatgaaag aagagtcaaa aaccgcaaaa aataccgcac
     5221 aagcggtcat tttttgtgtc ttttttgcaa gccttgagtc gtgagatttc aaggcttcat
     5281 tgttttgcag gcggcgtttg caaatttttt actaaaaacg accgcttgta ttgcaataat
     5341 cctttcatta cgccctcaat ttatcaaaat gtatatgaca gatgttcaat atatggctta
     5401 tgccatcacc cttgccgaaa aagcacgggg ttggacaagc cctaatccgc tagttggctg
     5461 tgtgatcgtg aaaaacggca acattatcgc cgaagggtat caccaaaaag ccggtagttg
     5521 gcacgctgaa cgcaatgcga ttttaaactg cgaggaagat ctgacggggg caaccgctta
     5581 tgtaacctta gagccttgtt gccaccacgg gcgaaccccg ccttgttccg aactgctgat
     5641 tgaacgtggg atcaaaaaag tgtttatcgg ctctcgagat ccgaacccac ttgtttctgg
     5701 caaaggagcg gcacagctta gagccgccgg cattgaggtt gtggaagact ttatgcgaac
     5761 ggagtgcgat gcgctgaacc cgattttctt ccattacatt caaaccaaac gcccttatgt
     5821 gttgctgaaa tatgggatga cggcagatgg taaaattgcg acttatacgg ggaattcgaa
     5881 atggatcacc ggcgaggctg cccgagctaa tgtacagaaa agccgccacg aatatagtgc
     5941 gattatggtc ggggtggaaa cggtgcttgc cgatgaccca atgctcaaca gccgaatgga
     6001 aaatgctaaa cagccggtgc ggattgtatg tgacagccaa ctgcgtaccc cattggatag
     6061 ccaactagtc caaactgcac gccaatatcg caccattatt gctacgctca ataatgatgc
     6121 aaaaaagcag gcagaatata ccgcttgcgg tgttgaaatt ttagtgacag gcgaacgtga
     6181 caagcgggtg gatttagccg atcttttgca aaagctgggc gaactcggga tcgacagctt
     6241 attgattgaa ggtggttcgc aactcaattt cagcgtgctg gaacaggggt tagtcaatcg
     6301 agtacattgc tatattgccc cgaaactgat tggcggcaaa gcggcaaaaa ccccgattgg
     6361 tggcaagggg attggcgagt tagcacaagc ggttaaatta cgtctaaaat ccaccgaatt
     6421 gctcggagaa gatattttgt tggattatga agtggacttg cttcgtaatt aaattgaaat
     6481 ttccttactc tcgcccgttt acgggagaga gacagcataa aatttcgttc agaaatttta
     6541 tgcagagaga ggggaaaatg agtgtaatct tccctctccc tccgaaaatc ctacggattt
     6601 tctcttccct ctcccgtaaa cgggagaggg gaatagtaag ataagcagtt ctcagactaa
     6661 attggaagta aatcggagaa aaatttaaat gttcacaggc attatcgaag aagttggcca
     6721 gatagcccaa attaagaaac aaggcgagtt tgtggtggta acggttaaag caaaaaagat
     6781 tctgaccgat gtacatttag gggatagcat tgcggtaaat ggcgtgtgtt taaccgtgac
     6841 ttcatttacg caggagcaat ttactgctga tgttatgtca gaaaccttaa aacgtacatc
     6901 acttggcgaa ttaagtatca acagctcggt taatcttgag cgggcaatgg cggcaaacgg
     6961 gcgttttggt gggcatattg tgtcaggtca tattgatggc acgggtgtgg ttgcagagat
     7021 tacaccagca gataattcaa cttggtatcg cattaaagcc gaacctaagt taatgcgtta
     7081 catcattgaa aaaggctcaa ttactattga tggcattagt ttaacggtgg tggatgttga
     7141 tgcggaatct ttccgggtat cgattattcc gcataccatt aaggaaaccg acctcggtac
     7201 gaaaaaaatc ggtagtttgg tgaatttaga aaatgacatt gtcggcaaat atatcgaaca
     7261 gtttttattg aaaaaagagc ctgaaaatcc gcaaagtaaa attactgcgg actttcttaa
     7321 aaatgcaggg ttttaaccaa ataaaggaca aataatgttt aagttttcaa cggtagaaga
     7381 agcaattcaa gcaattgcac aagggaaaat tattttagtc agcgatgatg ccgaccgtga
     7441 aaatgaaggg gacttcattt gtgcagcgga atttgcgaca ccggaaaata tcaactttat
     7501 ggcgaaatat ggtaaagggt tgatttgtac gccgatttcg acagaaattg ccaaaaaatt
     7561 aaattttcac ccgatggtgc tagagaacga agataatcat caaaccgcat ttaccgtttc
     7621 tgttgaccat attcaaaccg gcaccggtat ttccgctttt gagcgttcat taacttgcct
     7681 gaaaatgctt gatgaaaatg ctaagccgga agattttaga cgtccggggc atgttttccc
     7741 attagtggca aaagacggag gcgtattagt gcgtaacggt cataccgaag caactgtgga
     7801 tttagctcgt ttggcgggct tgaaaccggc agggctttgc tgtgaaatta tggcagaaga
     7861 cggcacgatg atgcagatgc cggaattaca ggcatttgca caagcacaca atatgccgtt
     7921 tattactatt cagcagttac aagagtatcg tagaaaacac gacagcttgg tgaatgtggt
     7981 ttcggtggta aaaatgccga ccaaatacgg tgagttcaaa gcacacagtt tcgttgaaac
     8041 tatttcaggc aaagaacacg tcgctttagt taaaggtgat attggtgatg gcgaaaatgt
     8101 attatgccgt atccattccg aatgtttaac cggcgatgcc tttggctcac aacgttgcga
     8161 ttgtggtcag cagttcgcag cggcaatgaa ccaagtggag caagagggca gaggcgtggt
     8221 gctttattta cgccaagaag gacgtggcat cggtttaatt aataaactgc gtgcttacga
     8281 attgcaagat agaggaatgg acacggttga agccaacctg gcattaggtt tcaaagatga
     8341 tgagcgtgaa tattatatcg ccgctcaaat gtttgaaaaa ttaggcgtaa aatcgattcg
     8401 tttgttaacc aataatccgg caaaaattga aggactcatt gagcaaggtt taaacgtagt
     8461 ggctcgtgag ccgattatgg ttgagccaaa cgaacacgat ttggaatacc ttaaagttaa
     8521 acagcacaaa atgcgacata tgtttaattt ctaatccaat actctctccc cttgtgggag
     8581 agagacagaa aaatacttcg ttcagaagta tttttcagag agagggtata ttttttagaa
     8641 aaagtttgca atttcccctc tccctgattt ttcttctgaa cgaagaaaaa tctatccctc
     8701 tcccacaagg ggagagggtt attgagtatc aaatttattt taaagaagga aaacaaacaa
     8761 tggcaacatt tcaaggaaac tacatcgcaa ctggtttaaa attcggtatt gtggcaacta
     8821 actggcacaa gatttttatc gatcaactgt taaacggtgc aaccgataaa ttattgcgtc
     8881 acggcgtaga agaaaaaaat atcgacaccg tatgggtgcc gggtgcatta gaaatctcaa
     8941 ttgcagcgaa aaaaatggca caaagcggtc gttatgatgc gattatctgc ttaggtgcgg
     9001 tcgtgcgtgg agcaaccagc cactatgatg tggtagtgaa cgagtcagca aaaggcatca
     9061 gctcttctgc tttagaaacc ggcgtgccga ttattaacgg tattttaacg gtggaaaatt
     9121 tagagcaagc gattgagcgt tcaggcacta aagccggtaa taaaggcgaa gagtgtgcaa
     9181 tggtagcgat tgaaatggcg aacctattaa aagccttagc gtaatcagcg ataaaatccc
     9241 cttagaccca agagcctaag gggatttttt tattttctgc gtagtaacag gctggcaatg
     9301 acacaaaata ggctgaaact gtaaattaac cagtgaccta attgtttaaa cggcgtatcg
     9361 cctttggttg gcacaatggt ggcagttagt gcatcagcag taaattgcgg tagttgttca
     9421 attacttttc cgttggcatc aacaatggcg gtaataccgg tattcgcagc tcgaagcaat
     9481 ggtttgccaa gttctaacgc tcgcattctt gccatttgga aatgttgcca aggcccgatg
     9541 gaagaaccaa accacgcatc attggtgata gttaataaat aatctgaatt ttggcttttt
     9601 tggttttgtt gtaactgatc accaaaaata atttcatagc aaatcgccat attaaatcgg
     9661 ttgtttttcg ccaagaatga tggttgaacg aaactgcctt gtgaaagatt aattggtaga
     9721 ataaacactt cccgcatcca atccagcacc gagccaaacg gcacatattc gccaaacggc
     9781 acaaggtgat gtttgttgta gcgagggttg ctgtgcaggg catattccct ctctttttcg
     9841 cctaatagca cgctactgtt aaacagttcc tcttgctcat tttgatagag tgtgccgata
     9901 ataatttcac ttccgtgttg gcgagctaag tgatcgagcg agccaagcag cgggctgatt
     9961 tgattttcaa gtgccggaat ggcggattca ggcaaaataa tcagttcact gttacctaat
    10021 aggggcagaa tgagctgttc gtaggttcgt acgctgtggt tgaaatgttg cggatcccac
    10081 ttcatttttt gctcaatatt cccttgtact aaactcacta caagcggttg tttttctgta
    10141 tcaatttgca caaattggag aaagcgagtg gcaaaactta agccaaaaat gaccgctagt
    10201 accatcaatg atggcacagt tttgttctct tgctgaataa ttttcactag atagctactt
    10261 gcaactatta ccaagaaagt caaaccttca acgcccaaaa tcggcgcaat accagcaaag
    10321 gggctgtcta ttaagctata gccgaattgt agccacggaa aaccggtaaa taccacgcct
    10381 cgtaaatatt cggtaaaggt aaaaatcgca gccaatgcaa acggattatt cagtttgagc
    10441 ctgtgtgaaa ctacactaaa cagcagatta taaatagcga gatagcacgc caacaggaat
    10501 actgctatgt agcttactat ggtaggaaca ccaccaaatt gggtcatact cacagaaacc
    10561 cagtttacac cggtgcagaa gtagccgata gaccaagcaa aggttgccca taatgcggtt
    10621 tttctgtttg ccagagtggc tgaccaaacc aagccggctg cggaagcaaa ggcaagaatc
    10681 caaatatcaa aaggcgaata ggcgaaagtg ccgattgcac ccagtatgat tgcaaggaga
    10741 caagcggtta aaaaaggcgg attttttgca aaattcataa taactcacta aataaatgag
    10801 gcacgccgaa acgtgccttg attgaaactc actatattat tcttcttcgt taggagaggt
    10861 tttttccatt ttctctaact gttcatcgga aagtgtgact cgtagctgaa tcaattggcg
    10921 gctattagct gaggtgactt taaaatcaat tccgtttaac tcaatttgct catctcgttt
    10981 cgggaaataa ccgaaagcct gcatcactaa accaccaatg gtatccacct cttcgtcatt
    11041 aaagtcggta gcaaaaaatt cattgaattt tttgatgtcg gtgagcggta ataccgcata
    11101 agtatgtctt gaaagctggc gaattggttt gacctcttct tcatcaaact catcttcaat
    11161 atcacccaca atttgttcaa gaatgtcttc aatggtgact aagcctgaaa ccgcaccaaa
    11221 ttcatcaacc actactgcca tatggaagcg ttctgaacgg aactctttta gcattcggtc
    11281 taggcgtttg ctttccggta caataaccgc agggcgtaat acctgttgca gattaaaggg
    11341 ttcagagtca gaacgtaaat atttcaataa atctttagag tgaagaatac cttcgatagt
    11401 atctttctca ccccgaatca ccggaaaacg agagtgtgcg gattcaataa ttaaatcaat
    11461 acagacatct aaaggttcat tggcatcaat aaacacaatt tgcgcacggg gaatcataat
    11521 atcccgcact cgtaattccg agatttccat tactccttcg atcatctctt tggtgtcgct
    11581 gtcgatcaat tcattttcaa cagagtctcg aatcacttcg actagatctt cacggttttt
    11641 aggctcgttt tgaaaaagcc cgctaaatag agagtgtaaa atcgattttt tttctgattt
    11701 ttcggtggtg tttacacttt gctgttcatc actcatagtt tgttccactt aaataaagta
    11761 cgcttataat aagcaaattc agtcacaaag caaataaaac attgctattt tcactcaaat
    11821 tagcatagga taagcaaaaa tctttttatt tcttcatatt ttaggagttt gaaatgaaat
    11881 taaccaaaat agcattaagt ttaacagcct tagttgtcag ttcgatgagt gtggccggga
    11941 cgttaagtac atcatcaatg gtggacattt tagcctttga cgggcaacgt gttaaatccg
    12001 gcacgacttc ggttcaaatg agtgagaata aaacgcatca agtggtagtg gaagtcggtg
    12061 ggacagttga aggggatttt ttcacctctg atcaaatcat tttgactttc caaggcagtg
    12121 cggaaaatgc aaaattagaa acgccaagat taaattcaaa gttagatctt cgtaaattcc
    12181 aagagaatca gactgtggca attaaaaccg attcaggtaa ggttatttca cataaacaag
    12241 atttcttaaa aggggaaggt ttccttgcga aaacaagagt tgaagataat ttaacgaaat
    12301 ataacttagc gaaaaaaaca gcttcagttg aacagtttgc gacggcacct cttgaagcaa
    12361 aaggacaaat tgtggtggat acaaataaag tttcacaaga agaattacag cttttattta
    12421 gaaaggcaga taaagacacc caaaaacgtt tcttagaatg ggcgaagaaa aatataaaat
    12481 aaacctatat caattaataa gcggtcattt ctcgccaatt ttttgcaagg tgttaaaaaa
    12541 atgaccgctc atacaatgag atttaccagc aataatagca gtaacgccag cctctataca
    12601 tatagtctct atcgtaattc caacgaattt cttcaagttc tacttgtgcc ttgtaatttt
    12661 gccaagcaag cttataacag gcttggaaca ttggggcatt gactttttcg gcatagcgtt
    12721 tcttaaatgc tttctcttct tgttcggttt ggctaagcgg cggattaaat tgttggtaca
    12781 ttaactccgc cgtttctaca tcacattgtt tggcgagctg aacttgcaaa tcttgttctg
    12841 cccgaatttg cttcgcttta cgttcagctt gttgctctgg agttaaagta cagctactta
    12901 acataagtgc gagtgaaaaa atgcagccta atttgagtgt tttcattgct gaatcctcta
    12961 gttgaaattg gtgatttatt ctaccgcttc taactcactt tcttcaagtt catcagccat
    13021 agcactaagg gcatcacggc taagttgtgc gagggcttta taaaaaccat tgtcgaaagc
    13081 ttctattttt cctaagaatt tgcctgcaca aggtagtaaa aattgttcga ataatatttt
    13141 ttgagctaag gcagaatcga gattatcttc gatccaagat gccgtgagaa atagtaaccc
    13201 aatgtgatcg gcattttcta attcaggcat tgcccgctct tgtctaaaag ctacaaaatt
    13261 attaactgat aatccatagg ctgaaattgt tggagaaata gccccatttt cagcaaaaag
    13321 cgcttgatag cttgctgcta attgcgtagg gttagcattc ttttgtaaga gagtcagcgc
    13381 attttcactt tggctatccg tatttaatgc ccagacttgg cgtaatcctc cttgggcaag
    13441 ccagttaaat gtgccagcta aaatagggtc ggtagggtga cgataaaata agttgccaaa
    13501 caaacggcaa agcagggaaa aatcgttaat ggtagtttcg ttcataattt gaaatagata
    13561 gaaaaaagaa ttgttagtat agcagaacac aagagaggac tgaatgaaat atataggcgc
    13621 acacgttagt gcttcaggtg gggtggaaaa tgcagttttg cgttccgtag aaattggtgc
    13681 taatgcattt gcgttattta ctaagaatca acgtcaatgg caggcaccgg cattaaaagc
    13741 cgaaactatc gaaaaattta agcgtttttg taaagtgcat catttttcag cagagcaaat
    13801 cttaccacac gatagctatt tgattaattt aggaaatccg gaagcggagg cattggagaa
    13861 atctcgtgta gcatttattg atgagatgtc tcgagcaaat caattaggtt taaaattgtt
    13921 gaattttcac ccgggggcgc atttaaagca aatttccgag caagattgtt tggctagaat
    13981 tgcagaatcg atcaatattg cagttgaaaa agtaccgaat gttattgccg tgattgaaaa
    14041 tacggcagga cagggttcta atttaggttg gcatttcgat catttggcaa ctattattga
    14101 gcaagttgag gataaaagcc gagtgggggt gtgtttagat acttgtcact tattttctgc
    14161 cggctatgat attagttctt atgaaaagag cgaggcagta tttaatgatt ttaaccaaac
    14221 ggttggtttt cattatttaa ggggaatgca cttaaatggt tcaaaaacac cattaggcag
    14281 cagagtggat cgtcatcata ccttaagaga aggcacaata ggaaccgaag tgtttgcatt
    14341 tattatgcaa aatatgcatt ttaaccatat tcctatgatt ttagagacaa tttcgcctga
    14401 aatttgggca gatgaaataa aatttctacg cacattggaa ctaaaatagg ttatactggt
    14461 ctgagtagtg ggtctagcag agtctagacc ttattttgtt atctttttta atcttttaga
    14521 agatttagtt aaggaattta ccgctgtaat tgttctggcg agacgagaca taaattatga
    14581 aaaaaaatct ttttgcaaca accttcaagc ccgtatttat tgcttctatt ttgtctgttt
    14641 ttggagggta ttcttccatt gctgtagcaa gtttaagttc taaaccggcc acaccaaatc
    14701 aaatcattgc aagtaaagca gaaagattag ctaagtcttc ttcagtattt accaatcgag
    14761 caaatcttcc aacttcttcc gctcatacag cgaattatag tggtcgtatt aatagtgttt
    14821 atcataattg ggtagggaca cgctatcgtt taggcggcac aacaaaagca ggaattgatt
    14881 gttccgcctt tgtgcgtgaa gtaatgggca aagcatttag taaagatatg cctcgttcaa
    14941 ctgcagaaca acgccatgtc gggcattcca tttcaaaatc tgatttacgc ccaggtgatt
    15001 tagtcttttt ccgtaagaat aaccatgtag gggtttatat tggtaatggt aaatttgtac
    15061 acgctagttc aagtagaggg gtaaccacca gctcattgtc agaaagctac tggtcaagaa
    15121 actacacaca atctcgccgt gtaatttaat aaattacaat tccaagatga aaagaacact
    15181 cacttttgcg agtgttcttt tttaattaaa aaagtttatg ctacgcgttg cttagcttgt
    15241 gtaaatgctc cacgagtacg catttgatga accacattag taattacacc tgctattttt
    15301 acttcagccc aatcagtaat tctaagattt gattcgctca catctaatga aaataaaatt
    15361 ttttcagcaa taccttcccc attctgaatt tcattaaaga attgatagaa tttatattcc
    15421 ccatcttttt caagcaccaa tagatcatta actaaatatt ggttggtctg ttctacaatc
    15481 aataaatcgt ctagttcaat tccccacgcg attaaatttg ggtttttcac gtggataaaa
    15541 aaagtgtctc ttgggcgttt gatacaaagt gagttaagat cgagctttac agagcggctg
    15601 ctattgaaat cccgataaag cggaatcggc tgataagctg ccgtttgatc tgaaatttgt
    15661 ctaattgaag ccatagtaaa atcctctatc tgttttttta tacagggtat tttactggct
    15721 aaaataccag tgtcaaccat tattttggaa ttttttgtaa atttaaccag tgttttgacc
    15781 gcttgttatc ctttaaaaag caataaaaaa gcacccatag ggtgcttctt atgcttaaaa
    15841 gctgttatta taggctttca gtgaatgtac gagtaataac atcgcgttgt tgctcagggg
    15901 ttaatgagtt gaaacgaact gcataacctg aaacacggat cgttaattga ggatatttct
    15961 cagggttttg aatcgcatct tctaatgttt cacggcgtaa aacgtttacg tttaagtgct
    16021 gaccaccttc aactttaatc gttggtgcaa cattaacggg tacttcacgg tatgcgatat
    16081 cacctaattc gctgatagca acaacttgat cttcttcaaa tcctgctttt gcagctaaac
    16141 aacgagcttc atttttagct tcgtctaata accagaaaga gtttaataag ttgctgtttg
    16201 atgattctgt gatttgtaca cctttaatc
//
LOCUS       DANMCL010000067        16223 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.067, whole genome shotgun sequence.
ACCESSION   DANMCL010000067 DANMCL010000000
VERSION     DANMCL010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16223
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.067"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            270..701
                     /locus_tag="PXF40_001871"
     CDS             270..701
                     /locus_tag="PXF40_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HDL5803190.1"
                     /translation="MTTQTSTQKNYFNLHTTGIGYLNDIRLVEPKKGNPFYACRIAAL
                     VGESDSPEYRYFDMNVVGKETETLIKRCQKAVSEEKKVLVSFVMADLWFDTFTYSTDS
                     KFHKKGDTGVSVKGRLIRIKMIKIDGEIAYQEKPKSDEQSE"
     gene            719..1711
                     /locus_tag="PXF40_001872"
     CDS             719..1711
                     /locus_tag="PXF40_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005588345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803191.1"
                     /translation="MLCWALLLDVQDLRVTFKTPDGDVTAVNDLTFSLNAGETLGIVG
                     ESGSGKSQTAFALMGLLADNGRISGSAKFNGQEILNLPETQLNRLRAEQIAMIFQDPM
                     TSLNPYMKIGEQLMEVLMLHKGMDHKTAFEESVRMLDAVKMPESRKRMNMYPHEFSGG
                     MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKSEFNTAIIMITHDLG
                     VVAGICDNVLVMYVGRTMEYGTAEQIFYTPSHPYSIGLIGAVPRVDGQEEELITIPGN
                     PPNLLRLPSGCPFQPRCVHATKQCLKAPALTLLNDQRLRACFVPAEQLIRGNAS"
     gene            1708..2697
                     /gene="oppF"
                     /locus_tag="PXF40_001873"
     CDS             1708..2697
                     /gene="oppF"
                     /locus_tag="PXF40_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000994906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HDL5803192.1"
                     /translation="MNTEKKVILEVKDLSVHFNIKDTKSLFFAKHQTLKAVNHVSFQL
                     YEGETLGVVGESGCGKSTLARAIIGLVESSGGNILWLGKELTQQSAKEWKTIRSDIQM
                     IFQDPLASLNPRMTIGSIIAEPLKIYQPHLTAEEVKEKVRAMMMKVGLLPNLINRYPH
                     EFSGGQCQRIGIARALIVEPKLIICDEPVSALDVSIQAQVVNLLKSLQREMGLSLIFI
                     AHDLAVVKHISDRVLVMYLGNAVELGDYEQVYHDTKHPYTKALMSAVPIPDPQLERNK
                     QIQLLEGDLPSPINPPSGCVFRTRCPLADQHCIADKPLLKGRDNHVVACFKAE"
     gene            complement(2801..3559)
                     /locus_tag="PXF40_001874"
                     /pseudo
     CDS             complement(2801..3559)
                     /locus_tag="PXF40_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014326384.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
     gene            complement(3689..4330)
                     /gene="bioD"
                     /locus_tag="PXF40_001875"
     CDS             complement(3689..4330)
                     /gene="bioD"
                     /locus_tag="PXF40_001875"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005724996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HDL5803193.1"
                     /translation="MAKVFFITGIDTDIGKTIATGWYAKKLMQQGASVITQKMIQTGC
                     RGIAEDLLIHRKIQGIELTEEDKQGITCPYVFDYPCSPHLAAKLEPRTIERKKIETCT
                     ALLCEKYDYVLLEGAGGLCVPYNEEETTLDYLCQHQYPVILVTSGKLGSINHTLLSLQ
                     VLNSKRVSVHAVIYNLYPETDQVISQETQHFLRRYLEKYSPNTLFEIMDLISV"
     gene            complement(4348..5103)
                     /gene="bioC"
                     /locus_tag="PXF40_001876"
     CDS             complement(4348..5103)
                     /gene="bioC"
                     /locus_tag="PXF40_001876"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HDL5803194.1"
                     /translation="MDRIDKGRIKQRFSAAVSNYDQQARAQQQIHQRLLSLLSYIDRQ
                     AFQRALEIGCGTGGLTKQLMSQLQVEHWELNDLCDMREHLQSVLPQPFHFHCGDAEQL
                     PFPQQYDLIASASVVQWFEDKAGFIARCKVRLKKHGFLLFSTFTPENLTQIKHLTGVG
                     LTYPRLEDWQKWLVPEFEILALEHEEIVLHFDDPLAVLKHLKQTGVTATQQQRWTKGQ
                     LHAFCQQYQQHYRNAQHKVELTYTPMYVLARLT"
     gene            complement(5107..5754)
                     /locus_tag="PXF40_001877"
     CDS             complement(5107..5754)
                     /locus_tag="PXF40_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005758126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HDL5803195.1"
                     /translation="MKTQHISQQGDNLIVYFAGWGTPPSVVEHLILPENYDLCLCYDY
                     RDLHCDVDFSAYQHIRVVAWSMGVWVAERVMQGYPLLSATAINGTGLPCDDQYGIPEA
                     IFAGTLSGLNEDNRTKFERRICGSKTLLRDYQHYSMRPTLQEIHAELTALYTFLQQDH
                     RTDLISWSKAIVGSKDKIFPAQNQRAYWQDRCAITEIAGEHLLFPHFTHWETCWL"
     gene            complement(5751..6914)
                     /gene="bioF"
                     /locus_tag="PXF40_001878"
     CDS             complement(5751..6914)
                     /gene="bioF"
                     /locus_tag="PXF40_001878"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HDL5803196.1"
                     /translation="MIRYYQQQLADLKAQNQFRQLPQLIHRGRFIQREDNTMLNMSSN
                     DYLGLANNEALRQAFFTQYQDQLPALTSSSSRLLTGSFPIYDELESLMAQAFGRETAL
                     LFNSGYHANIGILPALADKKTLIVADKLVHASMIDGIRLAQCEFVRFRHHDYVHLEQI
                     LQKNDRTFERIIVVTESVFSMDGDCADLTQLVALKQRYPQVMLYVDEAHAIGVLGEKG
                     LGLAEQQGCINQIDILVGTFGKALGSMGAYVICDQVIRDYLVNKMRPLIFSTALPPFN
                     VAWTHFVFQQLPHLQAERAHLAQLSQHLRQAIVDIFQVPMPSESCIVPYILGDNELTV
                     RTAQRLQQQGYYCLPIRPPTVPKGTSRIRFSLTADMQVAEVEQFIACLRELAE"
     gene            complement(6911..8212)
                     /locus_tag="PXF40_001879"
     CDS             complement(6911..8212)
                     /locus_tag="PXF40_001879"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HDL5803197.1"
                     /translation="MNEQQLLECDRQHIWHPYAALNADFPLFAVERAEGVYIQLKNGQ
                     QLIDGMSSWWSAIHGYNHPRLNHAATQQLSQMSHVMFGGLTHQPAVELAQQLVNILPE
                     SLDKIFFADSGSVAVEVAMKMAVQYQHAKGETQRYKFATIRSGYHGDTWHAMSVCDPV
                     TGMHSLFAKGLPVQYFLPQPPVKFGQAWQPEAMQPLQDLLAQHGDEIAGLILEPVVQG
                     AGGMYFYSPEYLVQAKALCEPYGILLIFDEIATGFGRTGKLFACEHANVVPDVMCIGK
                     ALTGGYLTLSATITNQAVADVICSGEAKCFMHGPTFMANPLACAVAAESIKLLLASPW
                     QQRIQQIEQQLRQELRQAEALDCVAEMRVLGAIGVIEMKAPVNMASLPPRFVQNGVWV
                     RPFGKLVYLMPPYIISSDQLSQLIHGTIRTLQEEYAHKESL"
     gene            8354..9241
                     /gene="psd"
                     /locus_tag="PXF40_001880"
     CDS             8354..9241
                     /gene="psd"
                     /locus_tag="PXF40_001880"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755522.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HDL5803198.1"
                     /translation="MNILEKKAQLSYWQRIKIAFQYVMPQLYLTRLAGWFAKQQWGAV
                     THFVIKLFAKKYHVDMSEAAKPNFSDYASFNEFFIRPLADNARPINQNPTALCLPADG
                     RISQLGHIEQDLLLQAKGHYFSLNDLLAGDEALAHHFKDGEFATTYLSPRDYHRVHMP
                     CDATLCKMIYVPGDLFSVNPFLAEHVPNLFARNERVICVFDTEFGKMVQILVGATITA
                     SMSTVWAGVINPPRPEKITTWAYEGESAVKLLKGQEMGAFQLGSTVINLFEKDRVQLA
                     SHLQVDSPVRMGEILAHQK"
     gene            9266..9820
                     /locus_tag="PXF40_001881"
     CDS             9266..9820
                     /locus_tag="PXF40_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5803199.1"
                     /translation="MSQQFFDQVSLESQLEVSAEAVAKGIFDVLNQNPPALELNEVSH
                     ALQTLQQQAKFKEIEAVGAQFLAENAQKAGVNTTESGLQYEVLVAGEGQIPAREDKVR
                     VHYTGTLIDGTVFDSSVKRGQPAEFPVNGVIAGWIEALSMMPVGSKWRLTIPHNLAYG
                     ERGAGASIPPFSTLVFEVELLAIL"
     gene            complement(9880..10203)
                     /locus_tag="PXF40_001882"
     CDS             complement(9880..10203)
                     /locus_tag="PXF40_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005755520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803200.1"
                     /translation="MNWKAVLIFSVLGSLVSCASYSEHAVQRIEAGKSFAVTGNTKRI
                     NTMACQDNDDWYLDGYRVGKSFREHQQKMLIQRTAYCEEQTGKAVPDKFRHSWNSGYQ
                     QGLKR"
     gene            complement(10227..11330)
                     /gene="proB"
                     /locus_tag="PXF40_001883"
     CDS             complement(10227..11330)
                     /gene="proB"
                     /locus_tag="PXF40_001883"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005719361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HDL5803201.1"
                     /translation="MKIDKTLVVKFGTSTLTQGSAKLNLPHMIDIVRQLAQLHQAGFR
                     LVIVTSGAIAAGRHYLNHPQLPPTIASKQLLAAVGQSQLIQTWEKLFAIYDIHIGQIL
                     LTRADIEDRERFLNARDTLRALLDNQIIPVINENDAVATSEIKVGDNDNLSALVAILV
                     QAEQLYLLTDQQGLFDRDPRKHPDAKLIADVDKITDHIRAIAGGSGTSLGTGGMSTKI
                     SAADVATRSGIETIIAPGNRPNVIVDLAYGQAIGTKFSVQADRLESRKQWLYAAPSAG
                     IITIDAGAENAMLIQHKSLLPAGIVNVEGRFSRGEVVKIRTQQGKDVALGMPRYNSDA
                     LHLIQGKHSQDIEQVLGYEYGAVAVHRDDMIVL"
     gene            11496..12484
                     /locus_tag="PXF40_001884"
                     /pseudo
     CDS             11496..12484
                     /locus_tag="PXF40_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252470.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
     gene            12559..13206
                     /locus_tag="PXF40_001885"
     CDS             12559..13206
                     /locus_tag="PXF40_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3560 domain-containing protein"
                     /protein_id="HDL5803202.1"
                     /translation="MTINTYAKFAPTVFVAKCSESHTKGEIITLTSKYGNETEVQVHN
                     LVKQDGEHYFYSFTRCDGMDSQSFAQQKAERYQGYADNAAKRSQDWVNAANEGCDFLS
                     LGEPIKIGHHSEKRHRNLIERNARRMDNAVAEMNKAASYESRIAYWEKMAGKIDLSMP
                     ESLEYFKFELDKAKTKHKELKDNPEKREHGYSLTYAKKAVNELEKKVKLAELLWA"
     gene            13230..13637
                     /locus_tag="PXF40_001886"
     CDS             13230..13637
                     /locus_tag="PXF40_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme utilization protein"
                     /protein_id="HDL5803203.1"
                     /translation="MNRQGIYINGKQVFDSQGEDIQSIGFFGCNIQTVVGINKGSILV
                     SSNSNQLLVNGQSIELGSEPVLKIEVLGNVQKLSAGAADVSITGDAGSVDTVSGDVSI
                     KGNVASYVKTVSGDVRCRAITGSVETVSGDIYR"
     gene            13735..14085
                     /locus_tag="PXF40_001887"
     CDS             13735..14085
                     /locus_tag="PXF40_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803204.1"
                     /translation="MTTINLSQQERELVEFVWNNRNTPWFFHCSVSNVSRNNTSRQIA
                     VCVIKDNQLISLDELIAKLCGYKLRQNGLYVTVHNMDAVFDTLYRFMCKLNDEMEANE
                     NVCPYLSLAHYEVF"
     gene            14176..14538
                     /locus_tag="PXF40_001888"
     CDS             14176..14538
                     /locus_tag="PXF40_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803205.1"
                     /translation="MIDTFFDLDDTSCYLGNWEDILKEYDDCLSVEDFWHSAKEFDTV
                     PHFGNLYQERVILKLIARFCIELNIEQDSGLVEFDYYINAIDTHFYINSQRICDIDDW
                     NEMLDKIREEMTPAKLVA"
     gene            14651..14911
                     /locus_tag="PXF40_001889"
     CDS             14651..14911
                     /locus_tag="PXF40_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803206.1"
                     /translation="MTFELGRVCATRAVAECFNQHTLVDLLHRYCSGDWGNLCDNDKK
                     ANVKAIERGGRILARYDVEDETLYVITEADRSYTTILFPYEY"
     gene            15001..>16223
                     /locus_tag="PXF40_001890"
     CDS             15001..>16223
                     /locus_tag="PXF40_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803207.1"
                     /translation="MFQYAILIIFPLCRTITNELSMEKQIYNRRKTLFGNEETAALYY
                     AAKDIIFEYEIYKPYSIYDDETISSLTLFNCFRYSKNKITHQIQVEYFCFDKKQWIKE
                     VHKYSKGGFKRCVNIPFFRFSKFFLNNAQRTAFSYVTHYIKKHSYAYSKADNIQELLV
                     KFFSRKQPVMQSAFNHQKRIVKWLWAEFWDKNIISMTLRIDGYRNANLWHYLRYQSRI
                     EVLYKIANEHPNLLPLLAYVKPEYWKCSDLFSYQNWVRSRDKQPFILYAKCQDKMLCE
                     SKGQWRWLKKQSRIVVDQCFLHVNQWQLLTEIQMPFKIPVCVICFILTNFSMISCELD
                     RSRQRRLLSIFIQYIYHYWKDNGFRQLKIHLSHLRVLFQDIEDYMIHEGYLHGIPQTW
                     QHLVYHLNLINSNTS"
BASE COUNT         4763 a         3413 c         3300 g         4747 t
ORIGIN      
        1 ctcaatttaa gacgctgtat ataacagcac ttaataagtc gcataactcc tgagaagcga
       61 cggctatcct tagaggtagt tgagttattg ccaaaatgtc tcctagcatt ctgaaaggga
      121 acgccacttt tgtgggaatg ccacctaaac cctctaccat ctcagtgaag catcattgag
      181 atttcatttt acttccacct cgcggggaac atttttcccg tgttgggcaa ggatgtttct
      241 ccgctttttt acatttggag aaacaaacta tgacaactca aacttctact caaaaaaatt
      301 acttcaacct tcatacaaca ggcattggct atctaaacga tattcgtttg gtagagccta
      361 aaaaaggaaa tcctttttat gcctgccgta tagcagctct ggttggcgaa tctgactctc
      421 ctgagtacag atattttgat atgaatgtag tcggtaaaga gactgaaaca cttatcaaaa
      481 gatgccaaaa agcagttagt gaagagaaaa aagtgcttgt gtcatttgta atggctgatt
      541 tgtggttcga tacatttact tactcaacag atagtaaatt ccacaaaaaa ggcgataccg
      601 gtgtatctgt aaaaggtcgc ttaatccgca tcaaaatgat taaaattgat ggggaaatag
      661 cctaccaaga aaagccaaaa tcagatgagc aatctgagta attttaccta agcccgacat
      721 tttatgttgg gctttattac tcgatgtaca agatttgcgc gtaactttta agaccccaga
      781 tggcgatgtt actgccgtca atgatctgac tttttcttta aatgccggtg aaaccctcgg
      841 cattgtcggc gaatctggct caggaaaatc gcaaaccgct tttgctctaa tggggctatt
      901 agcagataac gggcgaattt caggatcagc aaaatttaat ggacaagaaa ttctcaactt
      961 gcctgaaaca caacttaacc gcttgcgtgc tgaacaaatt gcgatgatct tccaagatcc
     1021 aatgacctcg ctgaaccctt atatgaaaat cggcgaacag ctaatggaag tactgatgtt
     1081 gcataaaggc atggatcata aaactgcgtt tgaagaatcg gtacggatgt tagatgcggt
     1141 gaaaatgccg gagtcacgta aacgtatgaa tatgtatccg catgaatttt ccggcggtat
     1201 gcgtcagcgt gtgatgattg cgatggcatt actttgccgt ccgaaactcc tcattgcgga
     1261 tgaacccaca actgcgctcg atgtgacggt gcaagctcaa atcatgacct tattaaacga
     1321 attaaaaagc gagtttaata ccgccattat catgattact cacgatctcg gtgtggtcgc
     1381 aggaatttgc gataatgtgt tggtgatgta tgtaggcaga accatggaat acggcaccgc
     1441 tgagcaaatt ttctataccc caagccaccc ttattctatc ggcttaattg gtgcagtgcc
     1501 tcgcgttgac ggacaggaag aagaactcat tactattccg ggtaatccac ctaacttatt
     1561 acgcttaccg agtggctgtc ctttccaacc acgttgcgtt catgcaacta aacagtgcct
     1621 caaagcaccg gcgttaacct tgttaaatga tcaacgttta cgcgcttgtt ttgtccctgc
     1681 cgagcaatta atccgaggta acgcatcatg aacacagaga aaaaagtgat cctagaagtg
     1741 aaggatttaa gcgttcattt caacatcaaa gatacgaaat ctttattctt tgctaaacac
     1801 caaactttaa aggccgtcaa tcatgtctct tttcagttat acgaaggcga aaccttaggt
     1861 gtggtcggtg aatcgggctg tggaaaatca actctcgcac gcgcgattat tggcttagtg
     1921 gaaagctctg gcggtaatat tttatggcta ggtaaggagt taactcaaca aagtgcgaaa
     1981 gaatggaaaa cgatccgtag cgatattcaa atgattttcc aagatccttt agcctccctg
     2041 aatccacgga tgaccattgg cagtatcatt gccgaaccat taaaaattta ccaaccccat
     2101 ttaaccgcgg aagaagtgaa agaaaaagta cgcgcgatga tgatgaaagt gggcttatta
     2161 cctaacttaa tcaatcgcta tccacatgaa ttttcgggtg gacaatgtca gcgtatcggg
     2221 attgcgcgcg ccttgattgt ggaaccaaaa ctcattattt gcgatgagcc agtgtccgcc
     2281 ttagatgttt caatccaagc acaagtagtg aatttattga aatctttaca acgcgaaatg
     2341 gggctatcat tgattttcat tgcacacgac cttgctgtgg tgaaacacat ttccgatcgt
     2401 gttttggtca tgtatcttgg taacgcggtg gaattaggtg actatgaaca agtctatcac
     2461 gatactaagc atccttatac caaagctttg atgtctgcgg taccgattcc tgatccgcaa
     2521 ttagaacgca ataaacaaat tcaattgctt gaaggcgatc tcccttcccc gattaatccg
     2581 ccgtcgggct gtgtgttccg cacccgttgc ccactggcag atcaacactg tattgcagac
     2641 aaaccgctcc tcaaaggacg agataatcac gttgttgctt gttttaaagc cgagtaatac
     2701 acacaaccgc acaaaaaagt gcggttgttt ttttgcgaat attcacagtc agactttcgt
     2761 gatactttcg ctctgagata aggattacga tacagagaag ttattcaaca atcacacgtg
     2821 cattgatcgg ttgcactgga cgattattgt gtcctttcat caaggtcgca aacgcctcaa
     2881 cttgagattg gctaatgttg tcatagtgtt ttaacactaa ccaatttaca ccttcagaac
     2941 aaggtggtgt agttaatgac ccgctgaaac gatagtaatc gcgttttttc ggaattaatg
     3001 ttgctgggtc aaaagcggta ctaagcgtat atttctcccc tgctttttgc gggaagtttt
     3061 gccaaattgg ggctaaccat tggttttcac ttgataatac atagagcacg ccaagcacag
     3121 caagattccc ttcattgtct gcgtgtacaa aatgtgcttc catcgggaag gatttacctc
     3181 aaattaagtt ttcactcggc acatggaaat ggaattgttt aagggtaaaa gtctttccat
     3241 taagctgcat gcgattactt gcctctttga aatccacttg aatagtatgc ccattattga
     3301 caatctccac attggaaggt cgataatcca gcttaatcgg cgctaactta ccatcaatcg
     3361 tatgcttgat atctattggt gtttggtttt taccttcgcc acaaatacgg aatttgggtg
     3421 aaagttcagc ccaatgttct ggcgattcgt gtccggtgta tccccaatgc gtgtgcgttt
     3481 cttctttctt aagggggctt gtacacgctg tcaatgctaa tgcacctaac gtaagcacaa
     3541 aaaggtttga ttttttcata gcctagctcc tgattaaaag agatgaattg atgagacaac
     3601 ctaaactcaa tgatgcctta atccgagacg ctttcatctt aggcaaaaca acactccatt
     3661 tcaagtataa cttgctcaag aatatatctt agaccgaaat caaatccatt atttcaaata
     3721 aggtattagg cgagtatttc tctaaataac gacgtaaaaa atgttgtgtt tcttggctaa
     3781 tgacttgatc tgtttccgga tacaagttgt atatcacagc atgcacactt actcttttgg
     3841 agttgagtac ttgtaaactc aataaggtat gattaatact acctagcttg ccagaggtaa
     3901 ctaaaatcac ggggtattga tgctgacaaa gataatcaag ggtggtttct tcctcattat
     3961 aaggtacaca caagccgccc gccccttcca ataatacata atcatatttt tcacacaaaa
     4021 gtgcggtgca ggtttcaatt tttttacgtt cgatcgtgcg cggttctaat ttcgcggcta
     4081 aatgcggtga gcaaggataa tcaaacacgt aaggacaagt gataccttgc ttatcttctt
     4141 ctgtaagctc aataccttgt atttttcggt gtatgagtaa atcttcggca attcctcggc
     4201 agcctgtttg gatcatcttt tgcgtgatga cacttgcgcc ttgttgcatc agtttcttgg
     4261 cgtaccaacc tgtggcgatg gttttgccaa tatcggtgtc gatgccagtg ataaaaaaaa
     4321 cctttgccat actttttcct tctaagatta agttaaacgc gccagcacat acatcggcgt
     4381 gtaagtgagt tctactttgt gttgtgcgtt acggtaatgt tgttgatatt gttggcaaaa
     4441 ggcgtgcaat tgcccttttg tccacctttg ctgctgtgtg gcagtaacgc ctgtttgttt
     4501 caaatgtttt aacaccgcta agggatcatc aaagtgcaac acaatctcct cgtgttcgag
     4561 ggctaaaatc tcaaattcag gcactagcca cttttgccag tcctcaagac gtggataagt
     4621 taaccccaca ccggtgaggt gtttgatctg tgttaaattc tcgggcgtga aagtactgaa
     4681 taacaaaaat ccgtgctttt ttaagcgcac tttacaacgc gcaataaaac ccgctttatc
     4741 ttcaaaccat tgcaccacgg aagcactggc aatcaaatca tactgctgcg gaaagggaag
     4801 ttgttccgca tcgccacaat ggaagtgaaa aggttggggc aacactgatt gcagatgctc
     4861 tcgcatatcg caaaggtcat tcagctccca gtgttcaacc tgcaactgtg acattaattg
     4921 cttcgttaat ccaccagtac cacatccaat ctctaatgca cgttggaatg cttgtctgtc
     4981 gatatacgac aataaactaa gcaaacgttg gtgaatctgc tgttgtgctc tcgcttgctg
     5041 atcatagttc gatacagcgg cagaaaaacg ctgtttaatg cgtcctttat caatacgatc
     5101 catgtgctac aaccaacaag tttcccaatg ggtgaagtga ggaaacaaca aatgctcccc
     5161 tgcgatttct gttattgcac aacgatcctg ccaataagcc cgctgatttt gtgcagggaa
     5221 aattttatct tttgagccga caatcgcctt gctccacgag attaaatctg tacggtgatc
     5281 ttgttgtaaa aaggtataaa gtgcggtcag ttcagcatga atttcctgta atgtgggacg
     5341 catggaatag tgctgataat ctcttaacag cgtttttgaa ccacaaatac gacgttcaaa
     5401 tttagtccga ttatcttcat ttaaaccaga taacgtgcca gcaaaaatgg cttcgggaat
     5461 accatattgg tcatcacaag gtaagcccgt gccattgatc gccgtagcag atagcagtgg
     5521 ataaccttgc atcacacgct ccgctaccca cacgcccatt gaccatgcca ccacgcgaat
     5581 atgttgataa gcggaaaaat caacatcgca atgcagatct cgataatcat agcaaaggca
     5641 taaatcataa ttttccggca gaatcaggtg ctcgaccacg ctcggcggtg tgccccaccc
     5701 tgcaaaatag acgatcagat tgtcgccttg ctgtgaaata tgttgtgttt tcattcagca
     5761 agctcccgta aacaagcaat aaattgttcc acttccgcca cttgcatatc tgcagtcagt
     5821 gaaaaacgaa tacgagaggt tccttttggg actgtcggcg ggcgaatcgg taagcaataa
     5881 tagccttgtt gttgcaaacg ttgcgccgtt cttactgtca gttcgttatc gcccaaaata
     5941 taaggtacga tacaactttc acttggcatc gggacttgaa aaatgtcaac aatcgcttgg
     6001 cgtaaatgtt gactaagctg agcaagatgt gcgcgttcgg cttgcaaatg tggtaattgt
     6061 tgaaagacaa aatgcgtcca tgccacatta aacggcggaa gtgccgtgga aaaaatcaat
     6121 gggcgcattt tattaaccaa ataatctcgg atcacttgat cgcaaatcac ataagccccc
     6181 atagagccca acgccttgcc aaacgtaccg actaaaatat caatttggtt gatacagcct
     6241 tgttgttctg ctaaccctag ccccttctcc cccaatacgc ctatcgcatg ggcttcatct
     6301 acatataaca tcacttgcgg atagcgctgt tttaatgcga ccaactgggt gaggtctgca
     6361 cagtcaccat ccatactaaa cacggattcc gtgaccacga taatccgctc aaaagtgcga
     6421 tcattttttt gcaaaatttg ttcaaggtgg acgtaatcat gatgacgaaa acgcacaaac
     6481 tcacattgtg ccaagcgaat gccatcaatc atactggcat gtaccagttt atccgccaca
     6541 atcagcgttt ttttgtccgc taaagcaggc aaaatcccaa tattagcatg ataaccgcta
     6601 ttaaatagca aggcagtttc tcgtccaaat gcctgcgcca ttaagctttc tagctcatca
     6661 taaatcggaa aagagcctgt taataaacgg gaggaagaag aagtcaatgc agggagttga
     6721 tcttggtatt gcgtgaaaaa tgcctgacgc aaggcttcgt tattggctaa acctaaataa
     6781 tcattggagg acatattcag catcgtattg tcctcacgtt gaataaaacg ccctcggtga
     6841 attagttggg gcagttggcg aaattgattc tgcgccttta aatcagctaa ctgctgctga
     6901 taatacctga tcatagagat tccttatgtg catattcttc ttgaagggtg cgaattgtgc
     6961 catgaattaa ttgagacaat tgatccgatg agatgatata cggtggcatc aaatacacta
     7021 atttgccaaa tggacgcacc caaacgccat tttgcacaaa gcgtggtggt aaacttgcca
     7081 tattgacagg cgccttcatt tcaatcaccc caatcgctcc aagtactctc atttcagcga
     7141 cacaatctaa ggcttccgct tggcgcaatt cttgacgtaa ttgctgttca atctgttgaa
     7201 tacgttgttg ccaagggctt gccaataaca atttgatact ttctgctgct accgcacacg
     7261 ccagtggatt tgccataaac gtcggaccgt gcataaaaca ttttgcctcg ccagaacaaa
     7321 tcacgtctgc taccgcttgg ttggtaatgg tagcggatag agttaaatac ccccccgtta
     7381 aagctttacc gatacacatc acatccggca cgacattggc atgttcacaa gcaaataatt
     7441 tgcctgtacg cccaaatcct gtggcaattt catcaaaaat cagcaaaatg ccgtacggtt
     7501 cgcataaggc ttttgcttgc accaaatact caggggaata aaaatacata ccacccgccc
     7561 cttgcactac cggttctaaa attaaacccg caatctcatc accatgttgt gccaataaat
     7621 cctgtaacgg ttgcatcgct tcgggttgcc aagcttgccc aaattttacc gggggttgcg
     7681 gtaaaaaata ttgcacgggt agccctttgg caaacaagct gtgcatgccg gtcacgggat
     7741 cacacacgga catcgcatgc caagtatcac catgatagcc cgaacgaatc gtagcaaatt
     7801 tatagcgctg tgtttcgcct ttagcatgtt gatattgcac tgccattttc atcgccactt
     7861 ccacggcgac cgaaccacta tcggcaaaga aaattttatc caaactttcc ggcaagatgt
     7921 tgaccagttg ctgcgccagt tctaccgctg gttggtgcgt taatccacca aacatcacat
     7981 gactcatttg actcagttgt tgcgtggcag cgtggtttaa acgggggtga ttatagccat
     8041 gaatcgctga ccaccacgat gacatgccat caatcaactg ctgaccgttt tttaactgga
     8101 tatacacacc ttcggcacgt tctactgcaa ataagggaaa atccgcattt aacgccgcat
     8161 aagggtgcca aatatgttgt cgatcacatt ctaaaagttg ctgctcattc atcgtttcac
     8221 ctcggttgtg aatcgccctt tcaactggcg taaattcacg caaatactta cataaacgga
     8281 ataacttgtt ataatcgcca agcatttggc ttttcaagcc cattattcta acttaaaaag
     8341 atgatttatt actatgaata tattagaaaa aaaagcacaa ctgagttact ggcaacggat
     8401 taaaattgcc tttcaatatg tgatgccaca actttattta acacgtcttg caggctggtt
     8461 tgcaaaacag caatggggtg ctgtcacaca ttttgtgatt aaattattcg cgaaaaaata
     8521 ccatgtggat atgagtgaag ctgcaaaacc aaatttcagc gactatgcga gctttaatga
     8581 attttttatc cgtccattag cggacaatgc ccgtccaatt aatcaaaatc ctaccgcact
     8641 ttgtttaccg gcagatggtc gtattagtca gttaggacac attgagcagg atttattgct
     8701 acaagccaaa ggacattatt tcagcttgaa cgatttgtta gctggcgacg aggcgctcgc
     8761 tcatcatttt aaagatggcg aatttgccac cacctacctc tcaccacgcg attaccaccg
     8821 tgtgcatatg ccttgtgatg ccaccttatg caaaatgatt tatgtgccag gtgacttatt
     8881 ctcagtcaat ccatttttag ccgaacacgt gccaaactta tttgcacgta atgaacgcgt
     8941 gatctgcgta ttcgataccg aatttggtaa aatggtccaa attttagtcg gcgcaaccat
     9001 taccgcgagt atgagcaccg tgtgggcagg tgtgatcaac ccgcctcgtc cagaaaaaat
     9061 caccacctgg gcctatgaag gagaaagtgc ggtcaaatta ctgaaaggac aagaaatggg
     9121 agcctttcaa ttgggctcga cggtgatcaa tttatttgaa aaagatcgtg tgcaactggc
     9181 atctcattta caagtggata gcccggtacg tatgggtgaa attcttgccc accaaaaata
     9241 atttttaacc acaataggaa aaacaatgag tcaacaattt ttcgaccaag tgtcattaga
     9301 aagccaactt gaagtgagcg ccgaagccgt cgcgaaaggg atctttgatg tgttaaatca
     9361 aaatccacca gcacttgagt taaatgaagt gagtcatgcc ctacagactt tgcaacaaca
     9421 agcgaaattc aaagaaattg aagccgttgg tgcacaattc ttagctgaaa acgcgcaaaa
     9481 agcgggggta aatactacgg aatctggttt acagtatgaa gtgttagtgg ctggtgaagg
     9541 gcaaattccg gcacgcgaag acaaagtgcg tgtgcattac actgggacat taatcgacgg
     9601 taccgtcttt gacagctcag taaaacgtgg tcaacctgca gaattcccag taaatggcgt
     9661 gatcgctggt tggattgaag ccttgtccat gatgccagtg ggttcaaaat ggcgtttaac
     9721 cattcctcac aacctcgctt atggcgaacg tggtgctggt gcctccattc cgccattcag
     9781 taccttagtg tttgaagtcg aattattagc cattctttaa agctaaacgc tagacataaa
     9841 aaagtgcggt cattttccgc acttttttat gtctagcgtt tatcgtttca agccttgctg
     9901 atagccgctg ttccacgaat ggcggaactt gtccggcaca gccttgcccg tttgttcttc
     9961 acagtaagcc gttcgttgaa tcaacatttt ttgttggtgt tctcgaaatg attttcccac
    10021 acgatagccg tccaaatacc aatcatcatt atcttgacat gccatggtat taatccgttt
    10081 tgtattcccc gtcactgcaa aagatttgcc tgcctcaata cgttgcaccg catgttcaga
    10141 gtatgaagca cagctcacca gcgaacctag tacactgaat atcaatactg ctttccaatt
    10201 catcttgtta cctttctttt tctgatttat aacacaatca tatcgtctcg gtgtaccgca
    10261 accgccccat attcataacc gagaacctgt tcgatatctt gcgaatgttt gccttgaatt
    10321 aaatggagcg catcgctgtt ataacgtggc atccctaagg caacatcctt gccttgctga
    10381 gtacgaattt ttaccacttc accgcgtgaa aagcgccctt ccacgtttac aatcccagca
    10441 ggcaataacg atttatgttg tattaacatc gcgttttccg cccccgcatc aatggtaata
    10501 ataccggctg acggcgccgc atatagccat tgtttacgac tttctaagcg atctgcttgc
    10561 acactaaatt tggtgccaat ggcttgccca taagctaagt ccacaatcac attcgggcga
    10621 ttacccggtg caataatggt ttcaatgccg gagcgggttg ccacatccgc ggcactgatt
    10681 ttggtggaca tgccacctgt gcctaacgag gtgccacttc cgcccgcaat cgcgcgaata
    10741 tgatcggtaa ttttgtccac gtcggcgatc aatttggcgt ctggatgttt gcgcggatca
    10801 cgatcaaata aaccttgctg atcagtaagc aaatacaact gttctgcttg caccaaaatt
    10861 gccactaacg cggataaatt atcgttatcg cctactttaa tttctgacgt agcgacagcg
    10921 tcattttcat taatcactgg aataatctga ttgtctaata aggcgcgcaa agtatctctg
    10981 gcatttaaaa aacgttcacg atcttcaatg tcggcacggg tcaataaaat ctgcccaata
    11041 tgaatatcat aaatggcaaa caatttttcc cacgtttgaa tgagctgact ttgtcctacc
    11101 gcagccaata attgtttcga ggcaatcgtc ggtggcaatt gcgggtgatt taaataatga
    11161 cgacctgccg caatcgcccc tgaggtaaca atcactaaac gaaagcccgc ttgatgaagc
    11221 tgtgcgagct gacgcacaat atctatcata tgaggtaaat ttaacttcgc cgatccttgc
    11281 gtaagcgtac tggttccaaa ttttacaacg agtgttttgt cgattttcat cttctctatc
    11341 ttcttatttt tgtcgcacaa aattgaagct aacttaccat taatcatcag aaaaatcatc
    11401 tcgtttactt gctattttct atgatttagc acaaattttt tctcactaaa aggcatataa
    11461 taaagcttct tgatttttca gctaggaacc cgattatgac ctcaacctct tcacaagaaa
    11521 cggagcggca acgagaaatc actcgccttt gtgttcaagt tgcccaactc ttatacaaca
    11581 tggtgcagaa agtgccatcg ttgtgcaaat ggcacatcgc ttaggcttag ccctcggtgt
    11641 agatagcgta gaatgtgccc tcacgccaaa tgccattatt cttactacat tagcccaaga
    11701 ccattgcatc acgacagtcc gtaaaaacca agacaaagga attaatatgc aagtggttac
    11761 cgaagtgcaa cgtattgtga ttacagcaga acgtaaaatc tatgatatgc aacaagtgca
    11821 tgccaaactg gctcgcatta aaccgcttaa atacaatcgc tattttgtga tgttgatgat
    11881 tggcgtatcc tgtgccagtt ttgctcattt atctggtggg gacgcactag tttcattggt
    11941 tacatttctc gccgcaacac tcgccatgta tgttcgccaa tcacttgccg caagacacta
    12001 taacccctta attgtatttg cggtgaccgc ctttgtcgcc tcactaattg cgggtatcgc
    12061 gttgaaatat aacatcggca atcagcccca aattgccttg gcatccagcg tattattgct
    12121 cgttcccggc tttccactga ttaatgcact cgccgatatt ttaaaagggc atatcaatat
    12181 ggggattgcc cgttgggcac tcgcgacaat cctcacattt ggggcatgct taggcattgt
    12241 atttgcgctg agtttattct tagaggaaat ctgtatgcta aataaattca ttcaagatga
    12301 atttctacgg ctagatcaac gttatgcagc ttggtatcaa agtgaagaaa cggatgaagt
    12361 tgccagaatg gggattcaag aaagtgagcg gattttgaaa attctgtatg cactgaaata
    12421 taacgaagac cctatgcaaa atggtttagg ctatattgca tttatggcat caaaaggcca
    12481 ataatttact tatctcaaca atttacccac cggggaaact cctcgatggc gtttccccta
    12541 ctttatagga gaaacgctat gactattaac acttatgcaa aatttgcacc taccgttttt
    12601 gttgcaaaat gctctgaatc acataccaaa ggtgaaatta ttacgctaac cagcaaatat
    12661 ggtaatgaaa ccgaggttca agtacataat cttgttaaac aagatggcga gcattatttt
    12721 tattcattta ctcgttgtga tgggatggat agtcagtcat ttgctcaaca aaaagcagaa
    12781 cgctatcaag gctatgcaga taatgcagcc aaacgtagtc aagattgggt aaatgccgct
    12841 aatgaggggt gtgatttttt gagtttaggt gagccaataa aaattggtca tcacagcgaa
    12901 aagagacacc gtaaccttat tgaacgtaat gctcgccgta tggacaatgc ggttgcagaa
    12961 atgaacaaag ctgcaagtta tgaatctcgt atcgcatatt gggaaaaaat ggcaggaaaa
    13021 attgacctgt ctatgccgga aagtctggaa tactttaagt ttgaattgga taaagccaaa
    13081 acaaagcaca aagaattgaa ggacaacccc gagaaacgag agcatggtta ttcactgact
    13141 tatgctaaaa aagcagttaa tgaacttgag aaaaaagtaa aattagctga attactttgg
    13201 gcataattat ttacaaagga gatgacgata tgaatcgaca aggtatttat attaatggca
    13261 aacaggtgtt tgattcacaa ggcgaagata ttcaaagcat tggatttttt ggctgcaata
    13321 ttcaaacggt cgtaggcata aacaaaggaa gtattttagt ctcgtccaat agtaatcaat
    13381 tattggtgaa tggacagtcg attgaattag gttctgagcc agtcctcaaa attgaggttt
    13441 tgggcaatgt gcagaaactg agtgccggtg ccgcagatgt ctctattaca ggagatgccg
    13501 gcagtgttga cacagttagc ggtgatgtct ctattaaggg aaatgttgcc tcttatgtga
    13561 aaaccgtgag tggtgatgtt cgctgtcgtg ctattaccgg ttcggtggaa accgtctccg
    13621 gtgatattta tcgctgatat ttactcatct tattatttac caccctattg ggaagcaatt
    13681 ttcccaaggt gggcagattg tttcccattt ttattttgaa tttggagaaa catgatgacc
    13741 actattaacc tttcacaaca agaacgtgag ttagttgaat ttgtctggaa taaccgtaat
    13801 acaccttggt tttttcactg tagtgtatcg aatgtgtcga gaaataatac ctctcggcaa
    13861 attgctgtat gtgtcattaa ggataatcaa ttgattagcc ttgatgaatt gatagcaaaa
    13921 ttatgtggtt ataaactcag acaaaacgga ttatacgtta ctgttcataa tatggatgct
    13981 gtttttgata ccttatatcg ctttatgtgc aagctaaatg atgagatgga ggcaaatgaa
    14041 aatgtttgcc cttatttatc attagctcac tatgaagtgt tttgattggt atcagaacta
    14101 tccaccctgt cgggaaacaa tttttccgat agggcagatt gtttcccact tttattttga
    14161 atttggagaa acataatgat agacaccttt tttgaccttg acgacacctc atgctattta
    14221 ggtaactggg aggatatact gaaagaatat gatgattgtc tttcagttga agatttttgg
    14281 cattccgcta aagaatttga taccgtacct cattttggca acctatacca ggagcgtgtc
    14341 atccttaagt tgattgctcg attctgtatt gagctgaata ttgagcaaga ttcaggttta
    14401 gtcgaatttg attattatat caatgcaata gatacgcatt tctatattaa tagccaaaga
    14461 atctgtgata tagatgattg gaatgaaatg ttagataaga ttcgtgaaga aatgacgccg
    14521 gctaaattag ttgcctaatt tttgcaaatt tttactaaaa atgacgctta ctgtcgtctt
    14581 aattcaccca cttggggaaa tatctcccca atgggatgac atttcccctc tttctgttta
    14641 ggagaaatgt atgacttttg agcttggtag agtatgtgca actcgtgcag ttgctgaatg
    14701 tttcaatcaa catacattag ttgatctact tcatcgctac tgcagtggtg attggggaaa
    14761 tttgtgtgat aacgacaaga aagccaatgt gaaagctatt gaacgcggag gacgcatttt
    14821 agctcgctat gatgtggaag atgaaacact ttatgtaatc acagaggctg atcgtagtta
    14881 cactacaatt ttatttcctt atgaatatta atggagcttc catttatacc ctacattttt
    14941 atgttatcaa acgccgtcaa atgatggcgt ttttctattt tatatctttc gattttatag
    15001 ttgtttcaat atgcaatttt aattattttt cctctttgta gaacaattac aaatgaatta
    15061 agcatggaaa aacaaatata taacagaaga aaaacattat tcggcaatga ggagacggct
    15121 gcactttatt atgcagctaa agacattatc tttgaatatg aaatttacaa accttattct
    15181 atctatgatg atgaaaccat ttcttctcta actttattta actgttttag atatagtaaa
    15241 aacaaaatta ctcatcaaat tcaagtcgag tatttttgtt ttgataagaa acaatggata
    15301 aaggaagttc ataaatattc aaaaggtgga tttaagagat gtgttaatat ccctttcttt
    15361 agatttagta agtttttcct taataatgca caacgaacag ccttttcata tgtaactcat
    15421 tacattaaga aacattccta tgcctatagt aaggcagaca atattcaaga attattagta
    15481 aagtttttct ctagaaagca acctgttatg caaagtgcat ttaatcatca aaaaaggatt
    15541 gttaagtggt tatgggctga attttgggat aagaatatta tctcgatgac acttagaatt
    15601 gatggttata gaaatgctaa cttatggcat tatttacgtt atcaatcacg gattgaggta
    15661 ttgtataaaa tagcaaatga acacccgaat ctactaccat tattagccta tgttaaacct
    15721 gagtactgga aatgctcgga cttatttagt tatcaaaatt gggtaagaag ccgtgataaa
    15781 cagcctttta ttttgtatgc taaatgccaa gataagatgt tatgtgaatc aaaggggcaa
    15841 tggagatggt taaaaaaaca gtcgagaata gttgtagatc aatgttttct acatgttaat
    15901 caatggcagt tattaacaga aattcaaatg cctttcaaga tcccagtatg tgtcatatgt
    15961 ttcatactta ctaattttag catgatcagc tgtgagttag atcgatctag acaacgtcga
    16021 ttactctcta tttttattca atatatctat cattattgga aagataatgg gtttagacaa
    16081 ttaaagatac atctttctca tctgagagtg ctttttcaag atattgaaga ttacatgata
    16141 catgaggggt atttacatgg tatacctcag acttggcaac atttggttta ccacctcaac
    16201 cttataaatt caaatacatc aaa
//
LOCUS       DANMCL010000068        16116 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.068, whole genome shotgun sequence.
ACCESSION   DANMCL010000068 DANMCL010000000
VERSION     DANMCL010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 16116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16116
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.068"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            183..2405
                     /gene="glgB"
                     /locus_tag="PXF40_001891"
     CDS             183..2405
                     /gene="glgB"
                     /locus_tag="PXF40_001891"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HDL5803208.1"
                     /translation="MQDYTYSEKDAFFVERLSSGSCNDPFSYLGIHPSNNGVIIRVFL
                     PSAIACQVIDLNGKPVSSMLKIDDRGFFIAELIGKKTDFSYRLLVEYPDSTVDIEDPY
                     RFKTHIQELDNWLFAEGKQLRPYEKLGAHLVTQNEVGGVHFSVWAPNAQRVSVVGDFN
                     HWNGLVHSMRFHPDSGIWDIFLPNVKKGECYKFEVLDRNGVLRLKSDPYAFASQFRPE
                     TASIVSGLPSIVPAEKTCRNANAPDKPISIYEVHLGSWRRNIENNYWLSYEELADELI
                     PYVKDMGFTHIELLPISEFPFDGSWGYQTTGIYSPTSRFGTPEGLSYFIQKAHDKGIG
                     VILDWVVGHFPVDEHGLVYFDGTHLYEHSDPKEGYHKDWNTLIFSYGRNEVSNYLSGN
                     ALYWIERFGIDALRVDAVASMIYRDYSRSDGEWIPNKYGGRENLEAIDFLRHTNNILR
                     DESQGGASIAEESTSFAGVSHSTERGGLGFNYKWNMGWMNDTLRYMQKDPIYRRYHHN
                     LMTFGMTYQYSEQFVLPLSHDEVVHGKGSLLNKMPGDCWQKFANLRAYYGYMWGYPGK
                     KLLFMGNEFAQGKEWNFAESLDWYLLGEEGGEWHKGVLGWVKALNHLYTQTPALFEQD
                     YNPEGFEWLVVDDHDNSVFAFERKAKNGDSVIVVSNFTPIVRENYRFGVNELAEYQEI
                     LNSDLACYCGSNVSNANRFASELIASHGKAYSLSITLPPLSTIFLKRAADKKTKQNKT
                     "
     gene            2429..4441
                     /gene="glgX"
                     /locus_tag="PXF40_001892"
     CDS             2429..4441
                     /gene="glgX"
                     /locus_tag="PXF40_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HDL5803209.1"
                     /translation="MHYFRGKPFPLGNKLDRQAGEFGTNFAIVSQNATAIELCLFDEN
                     HHETRIPMFSSGDTWHIFVAGVQAGTKYGYRVKGIQDEQAGLLFNPQKLLTDPYAKAI
                     EGKPDLSSAEAAAWYKWNDERDNASLAPKSIVIDEHFDWENDSQLFTPWAETIIYEMQ
                     VKGFSQRNFQIPSDIRGTFAGLAHPVSIDYLKTLGITAVELLPVTYHIDETHLQKQGL
                     VNYWGYNVLGNFAIDPNLAADKQNPLKEFKQLVKTLHQAHIEVIMDIVFNHTAESDKN
                     GPMLSFRGIDNTAYWLDKQGEYENWTGCGNTLNLSNPYILCWAIDCLIYWVEECHIDG
                     FRFDLASILGRTPSFSEKADFFTALKSHSKLTHIKLIAEPWDIGVEGYQLGQFPEPFY
                     QWNDCYRDDIRRFWLQNQGDWGLLARRLAGSDDVFTKYSVSKSINFITAHDGFTLQDL
                     TSYQQKHNWANGEQNRDGHNSNYSNNHGVEGQTADELVKKQREITACSLLATLFLSAG
                     VPMLLAGDEIGHSQQGNNNSYCQDNEITWLDWENMNHTRLDYVRSLIRLRKKIALLSK
                     QNNWWQEDSVQWLNPSAQLMNIDDWHNQHNGLVVLLQEEWLLLFNANRQPQPFLLPQG
                     NWKVVLEQAQGILMTDTQAVTLNNMGVCVLQKSDVMFANKLETQYA"
     gene            4434..5747
                     /gene="glgC"
                     /locus_tag="PXF40_001893"
     CDS             4434..5747
                     /gene="glgC"
                     /locus_tag="PXF40_001893"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HDL5803210.1"
                     /translation="MLNQESTALVARQDLTNDTLVLILAGGRGSRLYELTDKRAKPAV
                     YFGGSRRIIDFALSNCINSNLLKIGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLP
                     ARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLKDHVDQG
                     AKCTVGCIEVPRSQATEFGVMAVNEKLKVKEFVEKPADPPAMPGKPDSSLASMGIYVF
                     NADYLYEMLEKEASTPGTSHDFGKDIIPKAVEQGVLYAHPFERSCKGRNASGAIYWRD
                     VGTIDSYWAAHMDLVSEDPELDLYDESWPIHGRPQQTAPARFFYNRARARTLDNSLIA
                     GGCVITDAEISNSVLFNRVHVEAESVIEHTVILPQVTIGKNCVIKRAVIDRHCVIPDG
                     LEIGVNAEEDAKRFRVSKNGIVLVTQSMLDKLAGKEANSDIKYTI"
     gene            5870..7306
                     /gene="glgA"
                     /locus_tag="PXF40_001894"
     CDS             5870..7306
                     /gene="glgA"
                     /locus_tag="PXF40_001894"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HDL5803211.1"
                     /translation="MKVLHICSEMYPLIKTGGLADVMGALPFAQQQAGNDVRVLIPYY
                     PKVAQTLGETVEVATIGTFAGTVSVRFAYFNGLGVYVIDAPHLFMRDGNPYHDSNYQD
                     YPDNYKRFALLGYIGAQLAQGLDHWWGTAQVLHAHDWQAGLACAYLKSWGSNVKTLFT
                     IHNIAYIGRFNAFHLAELGLPWEFFHAEGLEFYGEISYLKAGLYFADRITTVSPTYAR
                     EITEEIAGAGLHGLLATRQYQGRLRGILNGVDAEVWNPETDTHIVVNYRANYMHGKAK
                     NKAELQRIFGLPEDKEALLMVMVTRLTEQKGADFLLANIDTLMQHKVQIIVLGSGSPD
                     LENALRYFQHKYPNQIGVKIGYDEALSHQIIAGGDLILVPSRFEPCGLTQLYGLKYGT
                     LPLVRRTGGLADTVVDSHKESIENRSATGFVFDYPDAPAFLEAAMRAISLWQKQKLWS
                     SVRQNALAQDFGWAKVAEQYQNLYHEII"
     gene            7401..9901
                     /locus_tag="PXF40_001895"
                     /pseudo
     CDS             7401..9901
                     /locus_tag="PXF40_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen/starch/alpha-glucan phosphorylase"
     gene            complement(9983..10699)
                     /gene="trmJ"
                     /locus_tag="PXF40_001896"
     CDS             complement(9983..10699)
                     /gene="trmJ"
                     /locus_tag="PXF40_001896"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HDL5803212.1"
                     /translation="MQILNQIQIILVETSLPANIGSAARAMKTMGLTHLRLVAPKQPL
                     DEQAEALAAGAKDVLDNAQCYATFDEAIADCQLVIGTSARLRHLQNTLIEPRDCGELV
                     VNRTNLGKVAIVFGRERVGLTNEELLKCQYHLNFPTNPDYGSLNLAMAVQLASYEIRM
                     AYLQNSGEKQPLAADKDYPTAQALEHFFAHTERLYTELGFIRNDSVMLKLRRLYQRAE
                     LETNELNLLRGMLTAVEKAN"
     gene            10879..12417
                     /gene="pntA"
                     /locus_tag="PXF40_001897"
     CDS             10879..12417
                     /gene="pntA"
                     /locus_tag="PXF40_001897"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HDL5803213.1"
                     /translation="MLIGVPRELLDGETRVAATPKTVEQIKKLGFDVLVEQDAGFKAS
                     FEDNTFLNAGANIGTQQEVWNADIIFKVNAPTEAEIELIKEGVTLVSFIWPAQNPQLM
                     EKLQSKKINVLAMDAVPRISRAQALDALSSMANISGYRAVIEAANAFGSFFTGQITAA
                     GKVPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDSRPEVKEQVKSMGADFLEIDFEE
                     EGGSGDGYAKVMSEEFNRRAMALYAEQAKEVDIIITTAAIPGKPAPRLITKEMVDSMK
                     PGSVIVDLAAATGGNCEYTKAGEIVVTDNQVKVIGYTDFPARLPTQSSQLYGTNLVNL
                     LKLLAPNKDGQIEINFDDVVLRGVTVVRDGELTWPAPPIQVSAQLQKQAAAPQAVKKE
                     EKPADPRVKYGVMAAAGVLFLWLASVAPAAFLSHFTVFVLACVVGYYVVWNVSHALHT
                     PLMAVTNAISGIIIVGAVLQIAQPTGNFFIDILAFIAILVASINIFGGFKVTQRMLAM
                     FRKG"
     gene            12432..13877
                     /gene="pntB"
                     /locus_tag="PXF40_001898"
     CDS             12432..13877
                     /gene="pntB"
                     /locus_tag="PXF40_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HDL5803214.1"
                     /translation="MSFGFVTAAYIIAAILFIMSLAGLSKHETAKAGCWYGIVGMAIA
                     LVATIFGPQSHGTIWILIAMAIGGFIGVKKALKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYGLHTNALMPANLDETAQAAFLAEQATLANIHNVEVFLGIFIGAVTFSGSLVAFG
                     KLSGKLFGRKVSSAALNIPHKHKWNLAAIIVSVFLMIVFLNNPHNIFPVLIMTIIALV
                     FGWHLVSSIGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYI
                     MCKAMNRSFISVIAGGFGNEVQSGKGDEEYGEHRETKAEEVAEMLKNASSVIITPGYG
                     MAVAQAQYPVAEITAKLREKGVNVRFGIHPVAGRLPGHMNVLLAEAKVPYDVVLEMDE
                     INDDFEETDVVLVIGANDTVNPAALDDPSSPIAGMPVLEVWKAQNVIVFKRSMAVGYA
                     GVQNPLFFKENTQMLFGDAKERVDDILRALN"
     gene            complement(13944..14870)
                     /locus_tag="PXF40_001899"
     CDS             complement(13944..14870)
                     /locus_tag="PXF40_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5803215.1"
                     /translation="MKPIFLEIRHLRTLIALKESGSVSLAAKRVHLTQSALSHQIKLL
                     EEQYDLTLFERKSSPIRFTPAGERLIKLAYDILPKVIEAELDLARVKQGEVGEVRVAV
                     ECHTCFDWLMPAMDTFRQHWPLVELDIVSGFHTDTVGLLLSHRADLAIVAEEEDSAGI
                     IYKPLFSYEMVAICSKDHPLATKDVWEAEDFKDETLITYPVPDDMLDLLRKILGPAGI
                     KVTRRNSELTIAIIQLVASRRGIAALPYWAVKPYLDRGYVVARKITQQGLYSTLYGAI
                     READATLAYLDDFHDTVKSQSFATLPGLMVLE"
     gene            complement(14980..16095)
                     /gene="asd"
                     /locus_tag="PXF40_001900"
     CDS             complement(14980..16095)
                     /gene="asd"
                     /locus_tag="PXF40_001900"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HDL5803216.1"
                     /translation="MQNVGFIGWRGMVGSVLMDRMVEENNFANINPVFFTTSQAGQKA
                     PVFGGKDAGELKNAFDIEELKKLDIIVTCQGGDYTNEVYPKLKETGWNGYWIDAASAL
                     RMKDDAIIVLDPVNQHVISEGLKNGIKTFVGGNCTVSLMLMAIGGLFEKDLVEWVSVA
                     TYQAASGAGAKNMRELLSQMGELEDSVKAELANPASSILDIERKVTAKMRAEDFPTEN
                     FGAALGGSLIPWIDKLLPETGQTKEEWKGYAETNKILGLSDNPIPVDGLCVRIGALRC
                     HSQAFTIKLKKDIPLAEIEQIIAAHNEWVKVIPNDKETTLRELTPAKVTGTLSVPVGR
                     LRKLAMGGEYLAAFTVGDQLLWGAAEPVRRILVQLTQ"
BASE COUNT         4623 a         3115 c         3680 g         4698 t
ORIGIN      
        1 gtttcaaaat gtgatctatg tcacaaaatt taaggtttga tgatttaaac taaagattaa
       61 aacgatttta ttttgtgatt tagctcaaaa aatggcgtaa atccacttct tttatttcta
      121 tttagtgata gagtgagaac tattgaaatt taagtattaa acgctttaag caaggagtgc
      181 cgatgcaaga ctatacttat tctgaaaaag atgctttttt tgttgagcga ctttcttcgg
      241 gttcttgtaa tgatcctttc tcctacctag gtattcaccc tagcaataac ggcgttatta
      301 ttagggtatt tcttccttct gccatagctt gccaagtgat cgatttaaac ggaaagcctg
      361 tgtcatcaat gctaaaaatt gatgatagag gcttttttat tgcagagctg attggtaaaa
      421 aaacagattt ttcttaccgc ttgttggtgg aataccctga ttcaacggtg gatatagaag
      481 acccttaccg ttttaaaacc catattcaag agcttgataa ttggttgttt gcggaaggaa
      541 aacaacttcg cccgtacgaa aaattaggcg cacatttagt cacacaaaat gaagttgggg
      601 gtgtgcattt tagcgtctgg gcgccgaacg ctcagcgggt ttccgtggtt ggggatttca
      661 accactggaa cggcttggta cattcaatgc gattccaccc cgattccggt atttgggata
      721 ttttcctgcc gaatgtgaaa aaaggggagt gctataaatt tgaagtgttg gatcgaaacg
      781 gcgtgctacg gttgaaatcc gacccttacg cctttgcctc ccaattccgc ccagaaaccg
      841 catctattgt ttccggcttg ccaagcattg tgccagccga gaaaacctgc cgtaatgcga
      901 atgctcccga taaaccgatt tccatttatg aagtgcattt aggctcttgg cgacgcaaca
      961 ttgaaaacaa ttattggctt agctatgaag agcttgccga tgaactcatt ccttatgtga
     1021 aagatatggg ctttacccat attgaattgc tgcctatttc cgaatttccg tttgatggct
     1081 cttggggtta tcaaaccacc ggtatttatt cgccaaccag ccgttttggt acgcctgagg
     1141 gcttgagtta ctttatccaa aaagctcacg ataaaggcat tggtgtgatt cttgactggg
     1201 tagtggggca ttttccggta gatgaacacg gcttggttta ttttgatgga acgcatttat
     1261 acgaacattc cgatccgaaa gagggctacc acaaagattg gaatacctta atttttagct
     1321 acggcagaaa tgaggtgagc aattatttgt ctggtaatgc actttattgg attgagcgtt
     1381 ttgggattga tgcgttgcgg gtggatgcgg tggcgtcaat gatttatcgt gattactcac
     1441 gttcagacgg cgagtggatt ccaaataaat atggcggacg tgagaactta gaggcaatcg
     1501 acttcttacg ccacaccaat aatattttga gagacgaaag ccaaggcggt gcgagcattg
     1561 cagaggagtc cacttctttt gccggagtgt ctcactcaac tgaaagaggc ggtttgggct
     1621 ttaattataa atggaatatg ggctggatga acgacacttt acgctatatg caaaaagatc
     1681 caatttaccg ccgttatcac cacaatttaa tgacttttgg tatgacctac caatacagcg
     1741 aacagtttgt gttaccgctt tcacacgatg aagttgttca cggcaaaggt tcattgctga
     1801 ataaaatgcc gggggattgc tggcaaaaat ttgcgaactt acgagcctat tatggctata
     1861 tgtggggcta tccgggcaaa aaattgctct ttatgggcaa cgagtttgct caaggtaaag
     1921 agtggaattt tgccgagagc ttagattggt atttactcgg ggaagaaggg ggcgaatggc
     1981 ataagggcgt attgggttgg gtaaaagccc ttaaccattt atacacccaa acccctgcac
     2041 tgtttgagca agattacaat cctgaaggtt ttgagtggtt agtggtggac gatcacgata
     2101 attcggtgtt tgcttttgag cgtaaagcca aaaatggcga ttcggtgatt gtggtgagta
     2161 atttcacccc gattgtgcgt gaaaattacc gttttggggt gaatgaattg gcagaatatc
     2221 aggaaattct caattctgat ttagcttgtt attgcggtag taatgtcagc aatgcaaacc
     2281 gatttgccag cgagttaatt gcatcgcacg gtaaagccta ctccttgagc attactttgc
     2341 caccgctatc gactatcttc ctcaaaagag ccgcagacaa aaaaacaaaa caaaacaaaa
     2401 cataacttaa agaaacataa aaaataatat gcactatttt agaggtaagc cttttccttt
     2461 aggcaataaa cttgatagac aagcgggtga atttggcaca aattttgcca ttgtttcgca
     2521 aaatgcaacc gctattgagt tatgtctttt tgatgaaaat caccacgaaa cccgtattcc
     2581 gatgttttct tccggagata cttggcacat ttttgtagca ggtgtacaag cagggacaaa
     2641 atatggctac agggtgaaag gcatacaaga tgaacaagcc ggtttgttat ttaatccgca
     2701 aaaattattg actgatcctt acgctaaagc gattgaaggg aagccggatt taagtagtgc
     2761 agaggcagcc gcttggtata aatggaacga tgaacgggat aatgcctctc ttgcacctaa
     2821 gtctatcgtg attgatgagc attttgattg ggaaaatgat agccagttat tcactccttg
     2881 ggcagagact attatttatg aaatgcaggt gaaaggtttt agtcagcgga actttcagat
     2941 tccaagcgac attcgaggca cttttgccgg tttggctcac cctgtttcga tagactattt
     3001 aaaaacctta ggaatcaccg cagtagaact tctacccgtt acttaccata ttgatgaaac
     3061 ccatttgcag aaacaagggc ttgtgaatta ttggggctat aatgtattag gtaattttgc
     3121 tattgatccg aatttagcag cagataagca aaatcctctt aaagagttta aacagctcgt
     3181 aaaaacatta catcaagcac atatcgaagt gattatggat attgtgttta accacacagc
     3241 tgagagtgat aaaaacgggc cgatgctaag ttttagaggc attgacaata cagcttattg
     3301 gctagataaa cagggcgaat acgaaaattg gactggctgt ggtaatacct taaatttgag
     3361 caatccttat atactctgct gggcaatcga ttgcttaatc tattgggtgg aggagtgcca
     3421 tattgatgga ttccgctttg atcttgcctc aattctaggt agaacaccga gtttttctga
     3481 aaaagcagat tttttcacag cacttaaaag ccattctaaa ttaacacata ttaagttgat
     3541 tgctgagcct tgggatattg gtgtagaagg ttatcaatta gggcaattcc ctgagccttt
     3601 ttatcagtgg aatgattgtt atcgtgatga tatacgccgt ttttggttac aaaaccaagg
     3661 tgattggggg cttttggcac ggcgattggc aggaagtgat gatgtgttta ctaaatattc
     3721 cgtttcaaaa agtatcaatt ttattacggc acacgatggg tttacgttac aagatctcac
     3781 cagctatcag caaaaacata attgggcaaa tggtgaacaa aaccgagacg ggcataatag
     3841 taactacagc aataaccacg gtgttgaagg gcagacagca gatgaattgg taaaaaaaca
     3901 gagagaaatc accgcttgta gtttgcttgc tacgctcttt ttatcggctg gtgttccaat
     3961 gcttttagcc ggtgatgaaa tcggacatag tcaacaaggt aacaataata gttattgcca
     4021 agataatgag atcacttggc tagattggga aaatatgaat cacacacggc tggattatgt
     4081 tcgtagttta atccggttgc gtaaaaaaat cgctttgctt tccaagcaga ataattggtg
     4141 gcaagaggat tcggtacaat ggttgaatcc ttctgctcag ctaatgaata ttgacgattg
     4201 gcataatcaa cataatgggc ttgtcgtttt attacaggaa gaatggctgc ttttattcaa
     4261 tgctaatcga caacctcaac cgtttttact gccacaaggc aactggaaag ttgtgttgga
     4321 gcaggctcaa ggtattttga tgacagacac gcaagcggtt acgctcaata atatgggtgt
     4381 atgcgtactt caaaaaagtg atgtaatgtt cgctaataaa ttggagacac aatatgctta
     4441 accaagaatc aacggctctt gttgcaagac aagatttaac caacgatacc ttagtattaa
     4501 ttcttgcagg aggacgaggt tctcgcctat acgaattaac cgataaacgt gcaaaaccgg
     4561 cagtctattt cggtggtagc cgccgtatta ttgattttgc gttatcaaat tgtattaact
     4621 cgaatttatt aaaaatcggg gtgattaccc aatatgcagc acactctttg ttgcgccatt
     4681 tacaacgtgg ttggtcattt ttaccttatg aacgtaacca atatattgat atgttaccgg
     4741 cacgccaaca gctagatgaa aacacttggt atcgtggcac agcggatgcg gtgtatcaaa
     4801 atatggcgat gatgaaatcg cactatagac caaaatatgt ggtgatttta gcaggggatc
     4861 atatctataa aatggactac actcaaatgc tgaaagatca cgtcgatcaa ggtgcaaaat
     4921 gtactgtagg ttgtatcgaa gtgcctcgct cgcaagcaac agagtttggg gtaatggcgg
     4981 tgaatgaaaa gctgaaagtg aaagagttcg tcgaaaaacc agctgatcca cctgcaatgc
     5041 cgggaaaacc ggattcctcg ctagcatcaa tggggattta tgtatttaat gcagattatc
     5101 tatatgaaat gctggaaaaa gaagcctcta caccgggaac ctcacatgat ttcggtaaag
     5161 atattattcc aaaagcagta gagcaaggtg tgctatatgc ccacccattt gaacgttctt
     5221 gtaaagggcg taatgccagt ggggcaattt actggcgaga tgtcggtacg attgacagct
     5281 actgggctgc ccatatggat ttagtttctg aagatccgga attagattta tatgatgaat
     5341 cttggccgat tcacggtcgt ccgcaacaaa ctgcaccggc acgttttttc tataatcgtg
     5401 cgcgtgccag aaccctagat aactcactga ttgcgggtgg ttgtgtgatt accgatgcgg
     5461 aaatcagtaa ttcggtctta tttaaccgtg ttcacgttga agcggagtcg gtgattgaac
     5521 acacagtgat tttaccgcag gtgactatcg gtaaaaattg cgtaattaag cgcgctgtga
     5581 ttgacagaca ttgtgtaatt cctgatggct tagaaattgg tgtaaatgcc gaagaagatg
     5641 cgaaacgttt tcgtgtcagc aaaaatggca ttgtattagt gacacagtca atgttagata
     5701 aattagcggg aaaagaagct aattcggata ttaaatatac aatttagtaa gagatgatat
     5761 aatgcttcga gtttgtcatt tgaggtcgca agctcgaagt attgttatga ttaaagcgct
     5821 tcaagcggtc ttatttttca actattttac acatagaaaa cggttaaaaa tgaaagtttt
     5881 acatatttgc tctgaaatgt accctttaat taaaacaggc ggtttagctg atgtaatggg
     5941 ggcattgcca tttgcgcaac agcaagctgg taatgatgtc agagtgttaa ttccttatta
     6001 cccgaaagtc gcgcaaactt taggggaaac ggtagaagtt gctactatcg gcacttttgc
     6061 cggaacagtc tctgttcgat ttgcttattt taatggctta ggcgtttacg ttatcgatgc
     6121 gcctcattta tttatgcgtg atggtaaccc ttaccacgac agcaattatc aagactatcc
     6181 ggataactat aaacgctttg ctttattagg ttacattggg gcgcaattag cccaaggttt
     6241 ggatcattgg tggggaaccg ctcaagtttt acacgcacac gattggcaag cagggcttgc
     6301 ttgtgcatat cttaaaagtt ggggaagcaa tgtaaaaacg ctcttcacta ttcataatat
     6361 tgcctatatc gggcgcttta atgccttcca tttagcagag cttggcttac cttgggaatt
     6421 tttccacgcc gaaggcttag aattttacgg tgaaatttct tacctcaaag caggtttgta
     6481 ttttgctgat cgcattacta ccgttagccc gacctatgct cgtgaaatta ctgaggaaat
     6541 tgccggtgca ggcttgcatg gtttactggc aacccgtcaa tatcaaggta gattgcgtgg
     6601 cattttaaac ggggtcgatg ctgaggtgtg gaatccggaa acggatacac atattgtggt
     6661 gaattatcgt gcgaactata tgcacggtaa agccaaaaat aaagcggaac tccaacgaat
     6721 ttttggtttg ccagaagaca aagaagcatt attgatggta atggtgactc gtttaactga
     6781 gcagaagggg gcagatttct tactcgccaa tatagatacc ttaatgcaac ataaggtaca
     6841 gattattgta ttgggaagtg gatcgccaga tttagaaaat gcgctacgtt atttccaaca
     6901 caaatacccg aaccaaattg gggtgaaaat cggttatgac gaggctttat cgcaccaaat
     6961 tattgcaggt ggtgatctga ttctagtacc aagccgtttt gagccgtgcg gattaactca
     7021 actttatggg ctgaaatatg gcactttacc gctggttcgc cgtaccggtg gcttagctga
     7081 tacggtggta gatagccata aagagagcat tgaaaaccgc agtgccaccg gatttgtatt
     7141 tgattaccca gatgcacctg cgtttttaga ggcagctatg cgggcaatca gcttatggca
     7201 gaaacaaaaa ttgtggtcga gcgttcgcca gaatgccctt gctcaagatt ttggttgggc
     7261 aaaagtggca gaacagtacc aaaatttata ccacgaaatt atttaatttg tattcacaac
     7321 atcatttcaa gcggtcgaat ttgcggattt ttttgtaaaa acgaccgctt gcaatattaa
     7381 aaattaggag aatttactca atgagcaggc agtcattaag cccagaaatg atcaaaaatg
     7441 ttaaaaatgc gattttgcac aaaatggtgt tcgctttagg ggtcgaaccc cgtgatgcca
     7501 gtaagcgtaa ctggctcaat gcaaccttac gtgtagtgcg tgatttatct accgaagatt
     7561 ggttacaaac ccgccgtagc caggttgcaa atggtagccg ccgtgtttat tacctttcaa
     7621 tggaattttt aatggggcgt acgttcagta acgcaatgat ttctgaaggt gtgtatgagc
     7681 ttattggcgc tgcgttaaaa gagttagggc aagatctgga agagattatc aatgaagagg
     7741 gcgtccgggc ttaggtaacg gtggcttagg gcgtttagcc gcctgctata tggacagcct
     7801 tgccacaatg aaaattccgg caatcggcta cggtattcaa tatgaatacg gtatgttccg
     7861 ccaagaaatc cgcaacgggg agcaaattga gcaacctgat gaatggttag agaatgaatt
     7921 tgtgtggcca tatctacgtt caagtaagcg tttcccggta cgctttggcg gtaaaacttg
     7981 gcgtgagggc aaaaaagtag tatggcagcc ggaagaagaa attaccgctc aagctcacga
     8041 ccaactgatc ccgggctttg agaccacctc aactaacagc ttacgtttat ggtctgcaca
     8101 cgcatcgggt agagggtttg gcttatctga ttttaaccgt ggcgattatt ttgcagcaat
     8161 ggttaaacaa aacagctcgg aaaacgtctc tcgtgtgctt tatccggacg attctaccta
     8221 taacggtcgt gaattacgct tacgccaaga gtatttcctt tgctcggcat ctgtacaaga
     8281 tattatccgc cgccacgaag cggagttcgg ctcttgtgtg aatttagccg acaaagtggc
     8341 aactcactta aatgacacac acccaaccct tgcggtgcct gagttaatgc gtattttaat
     8401 tgacgaaaaa ggctatggct gggaacaagc gtgggcgatg actcgtaaaa ttttcttcta
     8461 caccaatcac actttgatga gtgaagcgtt agaaacttgg ccggtagaaa tgttagcccg
     8521 tgtgctacca cgccatttag agattatttt cgacattaac gaatatttct tagaggaagt
     8581 gcgtagccaa ttcccggaag atcacgattt gatttctcgt gtttccttaa ttgatgaaca
     8641 aggcgatcgc cgtgtgcgta tggcgtggct tgcggtagtc gcctcagcga aagtaaatgg
     8701 tgtggcgaaa attcactcgg atttaatggt tgaatctatt tttgccgatt ttgcccgtat
     8761 ttacccaaat cgttttacta atgtgactaa tggggtgaca cctcgccgct ggatcaaaat
     8821 tgccaaccca gggcttgcta atattttaga taaatgtatc ggcaataagt ggctgactga
     8881 tttaagtgaa ttggaaaaat tcaacgtgtt tgttgatgat gctgatgtgc aagcacaggt
     8941 ggcagcggtg aaagtagaaa acaaacgtcg cttagccaaa tatgtcgaag aaactcaggg
     9001 aattaaactt aatcctgaag cgatttttga tgtacaagtt aagcgtattc acaagtataa
     9061 acgccagcaa atgaacgtgt tgcatatcat cacgctttat aaccgcatct tgaaaaaccc
     9121 gactgctgat tggacacctc gtgtgtttat cttcgcaggg aaagcggcaa gtgcttatta
     9181 tgcggcgaaa aaagtgattc gtttgattaa tgatgtggca aatgtggtga ataatgaccc
     9241 tcgcattaat gatttaatta aggtggtgtt tattccgaac tacggtgttt cattagcaca
     9301 aatgattatt ccggcagctg atgtttcaga gcaaatttcc ttagcgggta cagaggcctc
     9361 cggaacctct aatatgaaat ttgccctcaa tggtgcttta accattggta cattagacgg
     9421 tgcgaatgtc gaaattttag atcacgttgg taaagagaac atctttattt tcggtaatga
     9481 agtagagcag gtggaagagc ttcgccacaa cggttactca ccgtatcact actacgaaaa
     9541 agacagcgaa ttgaatgagg caatttcaca aattctaaac ggtaaattct caccggaaga
     9601 tccgtatcgc tatcaagatt tgatcttaaa ttcaggtgac tactaccaag cctgtgccga
     9661 ttatcgtagc tatgtggagg ctcaagaaaa agtggctcaa gcctatcgta acaagaaagc
     9721 ttggacacgt tcagccatca tcaatattgc caatatgggc tatttctcct cagaccgctc
     9781 ggtgatggat tatgcgaaaa atatttggca tatcgaaccg atgagcgaag aacaattaaa
     9841 aggcgattct acaatgggca gtattattga aagttcaaat aaactgttga atttaaaata
     9901 atgatttaga gaaaacgagt aatcttaccg tttttgtttt agtcagggat tttgcaaatt
     9961 tctactaaaa attaaccgct tgtcaatttg ccttctccac cgccgtgagc attcccctca
    10021 gtaaattcag ctcattagtt tccagttcgg cacgttggta taaacggcgg agttttagca
    10081 tcactgaatc attgcggata aagcctaatt cggtatataa gcgttcggtg tgagcaaaga
    10141 aatgctctaa ggcttgagcg gttgggtaat ccttatctgc tgcaagcggt tgtttttcgc
    10201 cagaattttg caaataagcc attcggattt cataacttgc gagctgtact gccattgcca
    10261 aattcagaga accataatca ggattggttg ggaaattcaa atggtactgg catttcaata
    10321 attcttcgtt ggttagcccc actcgctcac gtccaaatac aatcgccact ttgccaagat
    10381 tggttcgatt taccactaat tcaccacagt ctcttggttc aatcagggta ttttgcaaat
    10441 ggcgaagtct ggcactggtg ccgatcacca gttggcaatc ggcaatggct tcatcgaaag
    10501 tggcgtagca ttgagcgtta tccaacacat cttttgcccc agcagcaagg gcttcggctt
    10561 gttcatcaag cggttgtttt ggggcgacta atcgcaaatg ggttaagccc atcgttttca
    10621 ttgctcgggc tgcggaaccg atatttgccg ggagtgaagt ttcaacaaga atgatctgaa
    10681 tttggttgag aatctgcatt ggttttgttt cttttttgtt aaatttagcc tgttaatagt
    10741 gtagcaaaaa tttagcctgc ttaaaatttg aaaaaatggg aaataatcgg tttaattggg
    10801 cataattttt tacctatttg ttttatttag tggtacattt agagcgtttt taatcacaac
    10861 aaccatacag gagtctttat gcttattggt gtaccaagag agctgttaga cggtgaaact
    10921 cgagtggcgg caacgccaaa aaccgttgag cagatcaaaa aacttggctt tgacgtactt
    10981 gtggaacaag acgcaggttt taaagccagt tttgaagata atacattttt aaatgcaggt
    11041 gcaaatatcg gcacacaaca agaagtttgg aatgcagaca ttatttttaa agtgaatgcg
    11101 ccgacagaag ctgaaattga gttaatcaaa gaaggggtaa ccttagtcag ctttatttgg
    11161 ccggcacaaa atccacaatt gatggaaaaa ttgcagtcta agaaaattaa tgtgttggca
    11221 atggacgctg tgcctcgtat ttcccgtgcc caagctctcg atgctttaag ttcgatggca
    11281 aatatttcgg gttaccgtgc ggtgatcgaa gcggcaaacg cttttggtag cttctttact
    11341 gggcaaatta ccgcagcagg taaagtacca ccggcaaaag tgttggtaat tggagccggt
    11401 gttgctggct tggctgcaat cggggcggca aatagcctgg gggcgattgt gcgtgccttt
    11461 gactctcgtc ctgaagtaaa agagcaagtt aaatcaatgg gggctgattt cctcgaaatt
    11521 gattttgaag aagaaggtgg ctcaggtgac ggctatgcga aagtgatgtc ggaagagttt
    11581 aaccgtcgtg caatggcgtt atatgccgag caagccaaag aggtggatat tattattacc
    11641 accgctgcca ttccgggcaa acctgctcct cgtttaatca ctaaagagat ggttgattca
    11701 atgaaaccgg gttcagtgat tgttgattta gccgctgcaa ccggtggtaa ctgtgaatac
    11761 accaaagccg gcgagattgt ggtgaccgat aatcaagtga aagtgattgg ctataccgat
    11821 tttcctgcac gtttaccaac gcaatcttcg caactttatg gtactaactt ggtgaattta
    11881 ctcaaactgt tagcaccaaa taaagatggt caaattgaga ttaattttga tgatgtagtg
    11941 ttgcgtggcg taacggtggt gcgtgacggc gaattaactt ggccggctcc gccgattcaa
    12001 gtatctgccc aactgcaaaa acaagcagcc gcaccacaag cggtcaaaaa agaggaaaaa
    12061 cctgcagacc ctcgagtgaa atatggcgtg atggcagcag caggtgtgct gttcctatgg
    12121 cttgcatctg tggctccggc agcgttttta tcgcatttta ccgtattcgt tctcgcttgt
    12181 gtggtagggt attatgtggt ttggaacgtc agccacgcac tacatacccc attaatggcg
    12241 gtaacaaatg cgatttcagg gattatcatc gtaggtgcgg tattacaaat tgcccaaccg
    12301 accggtaatt tctttattga tattttggca tttattgcga ttttggttgc cagcatcaat
    12361 atttttggtg gctttaaagt aacgcaacgt atgcttgcaa tgtttagaaa aggttaagga
    12421 gaaacgaaac tatgtctttt ggatttgtga ctgctgcgta cattattgca gctattctct
    12481 ttattatgag cttagccggt ctttctaaac acgaaaccgc caaagcaggt tgttggtatg
    12541 ggattgtggg tatggcgatt gctttagtgg caaccatttt cggcccgcaa tcacatggca
    12601 cgatttggat cttaatcgca atggcaatcg gtggattcat cggggtgaaa aaagccctaa
    12661 aagtagaaat gaccgaaatg cctgaattag tggcaattct acacagcttt gtcggtttag
    12721 cagcggtatt ggttggtttt aacagctacg gacttcatac caatgcatta atgcctgcaa
    12781 atttagatga aactgcacaa gcggcatttt tagcggaaca agccactctt gccaatatcc
    12841 acaatgtgga agtgttctta ggtattttca ttggtgcggt aaccttctcc ggttcattgg
    12901 ttgcctttgg taaactaagc ggtaaattat ttggtcgtaa agtctcttct gcagcactga
    12961 atattccaca taaacacaaa tggaatttgg cagccattat cgtttctgtt tttttgatga
    13021 tcgtgttttt aaataatccg cacaatatct tccctgtgct gattatgaca attattgcgt
    13081 tagtcttcgg ctggcactta gtttcttcta ttggtggggc ggatatgccg gtggtagttt
    13141 caatgctgaa ttcttattca ggttgggcag ccgcagcggc aggctttatg ctaagcaacg
    13201 atttattaat cgtaaccggt gcattagtgg gatcatcagg tgctatcctt tcttatatta
    13261 tgtgtaaagc aatgaaccgc tcattcatta gcgtgattgc cggtggtttt ggcaatgaag
    13321 ttcagtctgg caaaggtgat gaagaatacg gtgaacaccg tgaaacgaaa gccgaagaag
    13381 tggcagaaat gctgaaaaat gcaagctctg tgatcatcac gccgggttat ggtatggcag
    13441 tggctcaagc acaatatccg gtagcggaaa tcaccgcaaa attgcgtgaa aaaggcgtga
    13501 atgtgcgttt tggtattcac cctgtggcag ggcgtttacc ggggcatatg aacgtattat
    13561 tggcggaagc gaaagtacct tatgatgtag tgctggagat ggacgaaatc aatgacgatt
    13621 ttgaagaaac cgatgtggta ttggtaatcg gtgcaaacga taccgtaaac cctgctgcat
    13681 tagacgaccc atcaagccct attgctggaa tgccggtgct tgaagtatgg aaagcacaaa
    13741 atgttatcgt gttcaaacgt tcaatggcag taggctacgc cggtgtgcaa aacccactgt
    13801 tctttaaaga aaatacccaa atgctatttg gtgatgcaaa agaacgtgtt gatgatattt
    13861 tacgggcgtt aaattaaatt taaataaaaa agcgaacata agttcgcttt tttgtgctta
    13921 ggctaacata aattgttaat tttttactct aataccatca atccgggaag agtcgcaaaa
    13981 ctctgcgatt ttacggtatc atggaaatca tctaagtagg ctagggtagc atcggcttct
    14041 cgaatagcgc cataaagggt gctatatagt ccttgctgag ttatttttct tgccaccaca
    14101 taccccctat ctaaatatgg tttaaccgcc caataaggta gtgcagcaat gcctcgccga
    14161 cttgctacta gctgaataat agcaatagtt aactcactat tacgccgagt aactttgatg
    14221 ccagcagggc ctaatatttt tcgcagtaaa tctagcatat catcaggtac tggataggta
    14281 attaatgtct catctttaaa atcttcagct tcccatacat cttttgtggc aagagggtga
    14341 tctttagagc aaatagctac catttcatat gaaaagagag gtttgtatat aataccagca
    14401 ctatcttcct cttcagcgac aattgccaga tctgcacgat ggcttaatag caaaccaacc
    14461 gtatcagtat ggaaacccga tacgatatct aattcaacta gaggccaatg ttgacggaaa
    14521 gtatccattg ccggcattag ccaatcaaaa caggtatggc attctactgc aacacgtacc
    14581 tctccgactt ctccttgttt cactcgggct aaatctaatt cagcctcaat gactttgggc
    14641 aaaatatcgt aggccaactt aattaaacgt tcgccagctg gtgtaaagcg aataggggag
    14701 ctttttcgct caaatagcgt aagatcatac tgttcttcca gtaattttat ttggtgtgaa
    14761 agtgcggatt gtgttaaatg gacacgcttt gctgcaagag atacgctacc gctctctttt
    14821 aatgcgatta atgtccgcaa atggcggatt tcaagaaaaa tcggtttcat aatttattca
    14881 tctaaaagtg aaaaaagatg aaaataatta taacaaacaa gcggtcaaat tctgcaaaaa
    14941 atttgcaaaa tccaaccgct tgtatagagc agtggcgaat tattgggtta attgaactaa
    15001 aatgcggcga acaggctctg ctgcacccca taataattgg tcacctacgg taaatgcagc
    15061 taagtattct ccacccatcg ctaatttacg caagcgacca accggcacgc tcaatgtacc
    15121 ggtcactttc gccggggtca attcacgcaa tgtggtttct ttgtcgtttg gaattacttt
    15181 cacccattca ttgtgggcag caataatttg ctcgatttcc gctaacggaa tatctttttt
    15241 cagcttaatt gtgaatgctt ggctgtggca gcgtaatgct ccaatacgca cgcataaacc
    15301 atcaactgga attgggttat cgcttaaacc taaaatttta ttagtttctg cataaccttt
    15361 ccactcttct ttagtttgcc cggtttccgg taataattta tcaatccaag gaattaagct
    15421 accgcccaat gccgcaccga agttctcggt tgggaagtct tccgcacgca ttttagccgt
    15481 aactttacgt tcaatatcta aaatagaaga ggcaggattt gctaattcag cttttacgct
    15541 atcttctaat tcacccattt gagaaagcaa ttcacgcata tttttcgcac cggcaccgga
    15601 agcggcttgg taagttgcta cagaaaccca ctcgaccaaa tctttctcaa ataaaccacc
    15661 gatagccatt agcattaggc ttacggtaca gtttccgcct acaaatgttt taatgccgtt
    15721 ttttaagcct tctgaaatca catgttggtt caccgggtct aatacgataa tagcatcgtc
    15781 tttcatacgt aatgcagaag ccgcgtcaat ccaatagccg ttccaaccgg tttcttttaa
    15841 ttttggatag acttcatttg tataatcacc accttggcaa gttacgataa tgtctaattt
    15901 ttttaattct tcaatgtcaa aggcgttttt taattcgccg gcatcttttc cgccaaaaac
    15961 aggggctttt tgacccgctt gtgaagtagt gaaaaaaaca gggttgatat tggcgaagtt
    16021 attttcttca accatacgat ccattaagac cgaaccgacc ataccacgcc aaccgataaa
    16081 acctacattt tgcattgtgt ttgctcctaa aaatga
//
LOCUS       DANMCL010000069        15784 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.069, whole genome shotgun sequence.
ACCESSION   DANMCL010000069 DANMCL010000000
VERSION     DANMCL010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15784
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.069"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            143..697
                     /gene="pilW"
                     /locus_tag="PXF40_001901"
     CDS             143..697
                     /gene="pilW"
                     /locus_tag="PXF40_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HDL5803217.1"
                     /translation="MFAKFFPKMTACILIFLLAACSSLPPSSSEVEFNRSEAVKARIN
                     LALAYLEQNDFPKAKQNIDKALAHDEKDYLPYSVLAYYYQQTGDAENAEKAYQTALKL
                     SQNRPDVLNNYGTFLCKQGQFQQAYQQFEQAVKSKAPYYHQADSLENMVLCAKKEPNL
                     QKIAETLTELEKLDKPRANLLKEN"
     gene            697..3021
                     /locus_tag="PXF40_001902"
     CDS             697..3021
                     /locus_tag="PXF40_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HDL5803218.1"
                     /translation="MTDLNLKISQIIAGELNVGSHQILAAITLLGEGNTIPFIARYRK
                     EVTGGLDDTQLRHFETRLIYLREMDERRQTILKSIEEQGKLTDELKAKILSSESKTEL
                     EDLYLPYKPKRRTRGQIAIEAGLEPLADSLWNDPKQDPETLAANFVDAEKGVADTKAA
                     LDGARYILMERFSEDAELLAKLRQYLTAYATLESKVIDGKEEEGEKFRDYFAHSEPFN
                     SVPSHRALAMFRGRNEGVLSLSLNADPTAEEGTKSSHCEEIIREHLGVIFNNQPADKW
                     REQVIAWTWKIKAALHLETELMATLCEKAEEEAIDVFARNLSALLMAAPAGARNTMGL
                     DPGLRTGVKVAVVDNTGKLLDTATIYPHTGREAEAQLAIFSLIKQHNVELIAIGNGTA
                     SRETERFAKAVIKEIKENKPQTVVVSEAGASVYSASEFAANEFPNLDVSLRGAVSIAR
                     RLQDPLAELVKIEPKAIGVGQYQHDVNQSQLARKLDAVVEDCVNAVGVDLNTASAPLL
                     ARVAGMTKTLAQNIVAFRDENGRFTSRSELKKVPRLGPKAFEQCAGFMRIIGGKNALD
                     ASSVHPEAYPVVEKILQATTSTLAELMGNNSKIHSLNAKDFVDEQFGLPTVNDIFKEL
                     EKPGRDPRGEFKTAVFMDGVEEITDLKAGMILEGTVTNVANFGAFVDIGVHQDGLVHI
                     SMLSNSFVEDPHTVVKAGDVVKVKVLEVDAARKRIALTMRLDDKPTDKKEPTSGRNSA
                     EICKNTQKNDRLQSNNRNAFGNNAFADALKGWKK"
     gene            complement(3092..3655)
                     /locus_tag="PXF40_001903"
     CDS             complement(3092..3655)
                     /locus_tag="PXF40_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HDL5803219.1"
                     /translation="MQILDLLHHRRSNKKFGDKAPNAEQLEQILKAGLRVPDHGRLKP
                     YRFVVIEKSGMPQFGECLKSAVAEFDMGEERLKKAEKLANQAPMIIGVVATLDDSIAK
                     VPSWEQMITAGCATYAIQLAANAQGFDTVWITNKWINGSALRSAFGCQESDKIIALIM
                     LGSPAEGEQIALAPESESLEGFVRYLK"
     gene            3758..5614
                     /gene="sppA"
                     /locus_tag="PXF40_001904"
     CDS             3758..5614
                     /gene="sppA"
                     /locus_tag="PXF40_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HDL5803220.1"
                     /translation="MLTILKAFYRIFRCIRECVINLFFILFILLLVPVVAFISSSGST
                     QKPVFNQGALRLNLDGYLADNREEFTDFYRLVQSELGSSEPFKISTFDVVQAISHAKN
                     DPKITGLVLDLQKLQSADFSSLDFIGNEINNFKQSGKPVIAVGEDYSQKQYYLASFAD
                     EIYLNKVGAVDLKGLNYSNTYFKTLLDKIEAEPHIFRVGTYKSAVEPFMRDDMSEEAK
                     QNARGWLNGTWQQTVATLAQNRNIEPQALDLSPANYIEKYKQAKGDDAQLALNQKWVS
                     QLVSSQESRDKLIAQFGKNSEGSYNQIEFLDYMTELNDRFAEVNAPKIAVVNVEGAIA
                     GGESDEMNVGSETLVKLLQQARDDKNVEGLILRINSPGGSAVASELIRQEVEAFQQAG
                     KPVVASMGGMAASGGYWIAATSDKIIASPNTLTGSIGIFGLAVTFEKTAKNLGVSEDG
                     IATSALAQQAGLKSLPQEQAEVLQIGIENGYDRFLELVSRGRKMPKEVVDKVAQGQVW
                     LGTDALKHGLVDELGNFNVAYNALSELINQKREAENQPKVEQFGLQWFAEQDDSLFGT
                     LARDFKAQLQFSVANWLDLPLLKQPQQQLETLSRFNDPKQMYLYCLNCGKID"
     gene            complement(5655..5831)
                     /locus_tag="PXF40_001905"
     CDS             complement(5655..5831)
                     /locus_tag="PXF40_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5803221.1"
                     /translation="MQVNQYQFGVAENKGRVQGSLGLSAGNGNHRLGLEASVASGKKL
                     KQPFNVLVNYRYQW"
     gene            complement(5839..6048)
                     /locus_tag="PXF40_001906"
     CDS             complement(5839..6048)
                     /locus_tag="PXF40_001906"
                     /inference="COORDINATES: protein motif:HMM:NF015737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5803222.1"
                     /translation="MESLVLNNDWVVTPQAQLAYHTINGKADEERLNLLVARAGVRVA
                     KGFALNNGWNLQPYAEVNGIAEKGQ"
     gene            complement(6087..7259)
                     /gene="cytX"
                     /locus_tag="PXF40_001907"
     CDS             complement(6087..7259)
                     /gene="cytX"
                     /locus_tag="PXF40_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HDL5803223.1"
                     /translation="MNRTLSTLNSGLIWAGAGISASAIVVGTWIAPLGWQQGLLAIVL
                     GHLLGGILFFAAGLIGAKTGKNAMQTVQISFGRGSVFFSLANVLQLVGWTAIMIYTGA
                     EISNALSLALWEYSAFSLWAIVLGLLIVLWLFTGSNQVGKFKLVTLIAMFLLTLWLSI
                     KVLNGQENFPVSGEMPFSTAVELATIMPLSWLPLVSDYTAKAKKPFAATLSATIGYLI
                     TSAWMYALGLGMVLFTGQTEIAPMLLMTGMSLIGIMVMILSTVTTTFLDAYSAGVSAG
                     NITAKFKETPTAILVTIIGTLLAISLPVTQYENFLLLIGSVFAPMIAVQIADFFVLKR
                     HQAQPNVDWVAAGLWLVGFVLYHLLSYHQVHLLLGLTIPVMLVIFLSTIFVRRFTK"
     gene            complement(7252..8781)
                     /gene="thiE"
                     /locus_tag="PXF40_001908"
     CDS             complement(7252..8781)
                     /gene="thiE"
                     /locus_tag="PXF40_001908"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HDL5803224.1"
                     /translation="MSNYSNSPYQPNVIWTVAGSDSCAGAGLQTDLHTFHDFNLVGCS
                     VVTSVTAQHPHGVLCVTPVDDHTFRQQFEALLVQGYPNAIKIGLLCSQAQVEILCEYI
                     QKIRAESSHYCYVVYDPVAVASSGQALSDSILLQIVQQKLYPLVDLITPNGTELALLS
                     DTEIQTFGDVKTASHKLFAQGIKAVLAKGGHFEWLGETVRDYLLTANEIYAFSHARQQ
                     SVNTHGTGCTYASAVGAMLATGFDLADAVTVATAYLQKGLSEKQGRGQTALSSLCHTG
                     YPDDIAFFPQTELISAPLKLPKEPFAPTEYQLGLYPVVDSVKWLERLILVGVKTLQIR
                     IKNRPLAEIEQEIAHSVALAKQHNVRLFVNDYWQLAMKYQAYGVHLGQEDLATADLNA
                     IQQSGLRLGVSTHCYFEIMRALAVKPSYIAFGHVFPTQTKVMPSQPQGLTNLAKYVAL
                     VAPLNIPTVAIGGINEQSIENVMHTGVGSAAVVSAVTQAKDWQQAVKNLAKFANGGRN
                     E"
     regulatory      complement(8849..8945)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(9081..10394)
                     /locus_tag="PXF40_001909"
     CDS             complement(9081..10394)
                     /locus_tag="PXF40_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5803225.1"
                     /translation="MSKTHSNPTKVAVASMVGTAIEYFDNYIYTMAAVLVFNVQFFNS
                     DDPVSNQLMSLSVLALAFFTRPMGSILFGHFGDKYGRKQTLIASLLLMGLSTVAIGLL
                     PNYAAIGIWATVLLCLCRIGQGLGLGGEWGGAALVATEHAPKHKRAFFGIFPQMGAPI
                     GLLLANGAFYLVNLIYGEQTFLDWAWRIPFVASIVMIAIGLYIRIKISESPIFLKAEQ
                     QGKNRHTPLKTLFSQHLKPFMIGVLIATAGYVLFYILVAFTPIFVKSPVAVSQAGHAT
                     GLGLPVNLYTQYLLITSVIFGIAIFFSGIYSDKIGRRLLLLLATGATVVYGLTMPFFL
                     ENGTPTSIFIFLTIGMILIGLSFGPMAVILPELFPTEVRYTGASLAYTAAGILGASVF
                     TIIAVKINENFGLFGVGGYLSVASLLSFWALWQVHETKDLELEEI"
     gene            complement(10387..11205)
                     /gene="thiM"
                     /locus_tag="PXF40_001910"
     CDS             complement(10387..11205)
                     /gene="thiM"
                     /locus_tag="PXF40_001910"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HDL5803226.1"
                     /translation="MTTSLPYHSHYLQKIRQNRPLVHNITNIVAANFSANGLLALGAS
                     PIMAAAIEEMESVPALSNAVVINIGTLIGKEVEAMELAGKTANRLGIPLILDPVGVGA
                     TPFRRQTVETLVDQIHFTAIRGNAGELATLAGVEWQAKGVDAGEGSHNVVEIAQQIAK
                     RYQTLVAISGETDVVSSGSHTALLHNGSPMFPKITASGCLLSAVCGAFLAVADKEHYF
                     NALIEACAAYAVAGEVAAQALKPTQYGQFAVNLLDTLGALTPETVEQYVRVEYV"
     regulatory      complement(11262..11358)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(11415..13196)
                     /gene="nrdD"
                     /locus_tag="PXF40_001911"
     CDS             complement(11415..13196)
                     /gene="nrdD"
                     /locus_tag="PXF40_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HDL5803227.1"
                     /translation="MIRLQPTQLDGKLHFINQYIQAKNAADGSKMDANANVTQKNIAT
                     MEQELMKDFFVQINRAKVSEKIAKIFGKETACEYLRQIEAHEIYVHDETSLKPYCVSV
                     TMYPFLRDGLTKLGGESKAPKHLASFCGSFINFVFAVSSQFAGAVATVEFLTYFDYFA
                     RKDYGDNYLQTHRSDIENHLQQVVYSINQPAAARGYQSVFWNISVYDKFYFEAMFSRF
                     VFPDFEKPNWETTSKLQLFFMQWFNKERSKAILTFPVVTAAMLTEKGKCKDDEFANQM
                     AKELSQGNSFFIYQSDNPDSLASCCRLRNEISDHSFSYSLGAGGVATGSINVITINMN
                     RLVQDNRDLSEEVSKIHKYQYAYRKLMEEYLAAGMLPVYDAGFISLHKQFLTIGINGM
                     AEAAESQGLTVGYNPDYIDFVQSRLKIIFQANQAAGEKYGVKFNTEFVPAENLGVKNA
                     KWDKEDGYFVPRDCYNSYFYVVEDEEINALDKFLLHGRELIEWLDGGSALHLNLDEAL
                     TQTGYRSLLDTAAKTGCNYFCINVKITICNECSHIDKRTLHSCSKCGSDNIDYGTRVI
                     GYLKRVSAFSSARQKEHSLRFYHREAA"
     gene            complement(13193..13666)
                     /gene="nrdG"
                     /locus_tag="PXF40_001912"
     CDS             complement(13193..13666)
                     /gene="nrdG"
                     /locus_tag="PXF40_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HDL5803228.1"
                     /translation="MENLRFSSEQIVWQEVPNETSLAFLITGCPLGCKGCHSADSWKA
                     CLGKELSSEYLSERLKRYQGLISCVLFMGGEWEAEKLLPLLQLAKKQGLNTCLYSGLE
                     QHEIAETLLHELTYLKTGRWIAERGGLESLTTNQRFTDLRNNQNLNHLFIRGASI"
     gene            complement(13879..14097)
                     /gene="ilvM"
                     /locus_tag="PXF40_001913"
     CDS             complement(13879..14097)
                     /gene="ilvM"
                     /locus_tag="PXF40_001913"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HDL5803229.1"
                     /translation="MEEYQLTLKANKRPETLERILRVIRHRGFEVKCLNVESTDSAFN
                     LNFTLASKRPLSLLSHQLEKLFDIIEIN"
     gene            complement(14107..15759)
                     /locus_tag="PXF40_001914"
     CDS             complement(14107..15759)
                     /locus_tag="PXF40_001914"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HDL5803230.1"
                     /translation="MNGARFITESLKAHGVTTLFGYPGGAIMPTYDAIYDSGLDHLLC
                     RNEQGAAMAAIGYARATGKVGVCIATSGPGATNLITGLGDAALDSIPVVAITGQVASH
                     LIGTDAFQEADVLGLSLACTKHSFIVQNIEELPEILALAFQIAQSGRPGPVLVDIPRD
                     VQLAQTSALPIVYPKEPADAQDPNKLVVAKQLLATAKRPVLYVGGGVSMADGVQAVRN
                     FVKIANIPSVSTLKGLGTIDPTDPLYMGMIGMHGTKAANYAVQECDLLIACGARFDDR
                     VTGKLDTFAPHAKVIHIDIDNAEINKLRQAQVALKGNLIEAVNYLAQPLDIEPWREDV
                     RNLKQQFDFQYQENSGDGNIDAVALLHTLSQRKAKNSIVTTDVGQHQMWSAQHLTYHD
                     PKNYITSAGFGSMGFGLPAAIGAIKARAEDQVILITGDGSIMMNIQELGTLKRADLAV
                     KILLLDNQRLGMVRQWQSLFFHGRHSQTILDDNPDFVLLAKAFDIDGERIEKASEVSD
                     AIDRMFNAKGAYLLHVCIPQEDNVWPLVPPGACNADMLDDEV"
BASE COUNT         4510 a         3426 c         3560 g         4288 t
ORIGIN      
        1 ttaccctagc acaacacccc attattattt ttgcgatctg cgtcgaaaaa tgaaaacgaa
       61 aaatttttct tcttcgcaaa aaatcgctag tcttagcgag gatggaacag taaaattaag
      121 ccctttgttg taggagaacg ttatgtttgc aaaatttttt ccaaaaatga ccgcttgtat
      181 tctgattttt ttattagcgg cttgttcttc tcttccccct tcttcctctg aagtcgaatt
      241 taaccgctcg gaagcggtaa aagcccgtat taatttggct ttagcttatc tggagcaaaa
      301 tgatttccca aaagctaagc agaatattga taaagccttg gctcacgatg aaaaagatta
      361 cctcccttat tcggtgcttg cctattatta ccaacaaaca ggtgatgctg aaaatgccga
      421 aaaagcctac caaacggcac tgaaattgag tcaaaaccgc cctgatgtgc tgaataatta
      481 cggcactttt ttatgtaaac agggtcaatt tcaacaggct tatcagcaat ttgagcaggc
      541 tgtcaaaagc aaagcaccct actatcacca agcggatagc ttagaaaata tggtgttatg
      601 tgcgaaaaaa gagccgaatc tgcaaaaaat tgccgaaaca ttgaccgagc ttgagaaatt
      661 ggataaacct cgagcaaatt tattgaagga aaactaatga ctgacttaaa tctaaaaatc
      721 agccaaatta ttgccggcga actcaacgtt ggctcacacc aaattcttgc agccatcacg
      781 ctattaggtg agggcaatac cattccattt attgctcgtt accgtaaaga agtgaccggc
      841 gggctagacg acacccaact tcgccatttt gaaacccgct taatttattt gcgtgaaatg
      901 gacgaacgcc gccaaaccat tttgaagtcg attgaagaac aaggcaaatt aaccgatgaa
      961 ttaaaagcca aaattctaag cagtgaaagc aagaccgagc tggaagatct ctatttgccg
     1021 tataaaccaa aacgtcgcac cagagggcaa attgcgattg aagcagggtt agagccattg
     1081 gcggacagtt tatggaatga tccgaaacaa gatcctgaaa ccttagcggc aaactttgtt
     1141 gatgcggaaa aaggcgttgc ggataccaag gccgcattag acggggcaag atatatttta
     1201 atggagcgtt ttagcgaaga tgctgagcta cttgcaaaac ttcgccaata tttgaccgct
     1261 tacgccacgt tggaatcgaa agtgattgac ggcaaagagg aagagggcga gaaattccgt
     1321 gattattttg ctcatagcga gccgtttaac agcgtgcctt cccaccgtgc tttggcgatg
     1381 ttccgtgggc gaaatgaagg ggtgttatca ctttcattaa atgccgatcc gactgcagaa
     1441 gaaggcacaa aatccagcca ttgtgaagaa attattcgtg agcatttggg cgtgattttt
     1501 aataatcaac cagcagataa atggcgtgag caagtgattg cttggacgtg gaaaatcaaa
     1561 gcagctctgc atttagaaac cgaattaatg gcaaccctgt gtgaaaaagc tgaagaagag
     1621 gcgattgatg tgtttgcccg caatctctcg gcattattaa tggcagcccc tgccggtgcg
     1681 agaaatacaa tggggctaga cccgggcttg cgtaccggcg tgaaagtggc ggtggtggat
     1741 aacaccggta aattgctgga taccgccaca atttaccctc acactgggcg agaggcggag
     1801 gcacagcttg cgattttcag cttaatcaaa caacacaatg tggaactgat tgcgattggt
     1861 aacggtacgg cctctcgtga aaccgaacgt tttgccaaag cggtgattaa agaaatcaaa
     1921 gagaataaac cgcaaacggt ggtggtgagt gaggctgggg catcggtcta ttctgcctct
     1981 gaatttgcgg ctaacgagtt tccaaattta gacgtttcat tacggggagc ggtttcgatt
     2041 gcccgccgtt tgcaagatcc acttgccgag ttggtgaaaa tcgaaccaaa agcgattggt
     2101 gttgggcagt atcaacacga tgtaaaccaa tcccaacttg cccgtaaact cgatgcggta
     2161 gtagaagatt gtgtaaacgc agtgggcgtg gatctgaata cagcctccgc tccgttgctg
     2221 gctcgggtgg cgggaatgac caaaacattg gcacaaaata tcgtggcatt ccgtgacgaa
     2281 aacggccgtt ttaccagccg ctcagagctg aaaaaagtgc ctcgtttagg gccgaaagcc
     2341 tttgaacagt gtgccggttt tatgcgaatt atcggtggga aaaatgccct tgatgcctca
     2401 agcgttcacc cggaagctta cccggtggta gaaaaaatct tacaggcaac tacctcaaca
     2461 cttgcagaat taatgggtaa caacagcaaa attcactcgc tcaacgccaa agattttgtg
     2521 gatgagcagt ttggtttacc aacggtgaac gatattttca aagagttaga aaaaccgggg
     2581 cgtgaccctc gtggagagtt taaaaccgcc gtgtttatgg acggcgtgga agaaattacc
     2641 gacctcaaag ccggtatgat tttggagggc acagtgacca atgtggcaaa ctttggggct
     2701 tttgtcgata ttggcgtaca ccaagatggc ttggtgcata tttcaatgct ctcaaactct
     2761 tttgttgaag atccgcacac ggtagtgaaa gctggtgatg tggtgaaagt caaagtgctt
     2821 gaggtggacg ctgcccgcaa acgtattgcc cttacgatgc gtttagacga caaaccaacc
     2881 gataaaaaag agccaacaag cggtcgaaat tcagcagaaa tttgcaaaaa tacgcagaaa
     2941 aatgaccgct tgcaaagcaa caatcgcaac gcttttggta acaatgcctt tgccgatgcg
     3001 ttaaaaggct ggaagaagta aggcgaaaac agataaaagc aagggcgaaa tatttttcgc
     3061 ccttattact aacttttatc tgttaacctg cttacttaag ataacgtaca aacccctcta
     3121 aactttcact ttcaggggct aatgcaattt gctcgccctc tgccggtgag ccaagcataa
     3181 ttaaggcaat gattttatca gattcttggc aaccaaaagc ggagcgaaga gcagagccgt
     3241 taatccattt attggtgatc caaaccgtat caaagccctg tgcatttgcc gctaactgaa
     3301 tcgcataagt tgcacagcct gcggtaatca tttgttccca acttggcact ttggcgatgc
     3361 tgtcgtctaa tgttgctacc acgccgataa tcattggagc ttgattagct aatttttccg
     3421 ctttttttaa gcgttcctcg cccatatcaa attctgctac cgcagacttt aagcattcac
     3481 caaactgtgg cataccgctt ttttcaatca ccacaaagcg ataaggcttt aaccgcccgt
     3541 gatccggcac tcgcaagccg gcttttagaa tttgttccag ttgttctgca ttcggggctt
     3601 tatcgccaaa ttttttattt gaacggcgat ggtgtaataa atccaagatt tgcataagcg
     3661 ttcctttgtt aattttttgc gttcaagaat agcatatttt cttcatttag cgattgcttt
     3721 atactgtgcc gactgagttt atttttagga atttccgatg ttaacgattt taaaagcatt
     3781 ttaccgaatc ttccgttgta ttagagagtg tgtcattaat ctctttttta ttctgtttat
     3841 tttgctatta gtgccggtgg tcgcatttat cagctcttct ggcagcacgc aaaagccggt
     3901 gttcaatcaa ggggcgttac gtttaaattt agatggttat ttagcagata atcgggaaga
     3961 attcactgat ttctaccgct tggtgcaatc ggaattaggt agttccgagc cgtttaaaat
     4021 ctcgactttt gatgtggtgc aagcgattag ccacgctaaa aatgacccga aaattaccgg
     4081 cttggtgtta gatctgcaaa agctacaaag tgctgatttc agctcattgg attttatcgg
     4141 caatgaaatc aacaacttca aacaatcggg caagccggtg attgcagtgg gcgaagacta
     4201 ctcgcaaaaa caatattatc ttgcttcctt tgctgatgaa atttatctca ataaagtcgg
     4261 tgcggtggat ttaaaaggct taaattattc caacacttat ttcaaaacct tgctcgataa
     4321 aattgaggct gaaccgcata ttttccgtgt cggtacttat aaatcggcgg ttgagccgtt
     4381 tatgcgtgat gatatgtctg aggaggcgaa acaaaatgcc cgaggctggt taaacggcac
     4441 ttggcaacaa actgtggcaa cactagctca aaaccgcaac attgaaccgc aagcactgga
     4501 tttatcgcct gccaattaca ttgaaaaata taaacaagct aaaggagatg atgctcaact
     4561 ggcattaaat caaaaatggg ttagtcagtt agtgtccagc caagaaagtc gggataaact
     4621 gattgcacag tttggcaaaa acagcgaagg cagttataac cagattgaat ttttagatta
     4681 tatgactgaa ctaaacgacc gctttgcaga agtgaatgct ccgaaaattg cggtagtgaa
     4741 tgtggaaggg gcgattgctg gcggtgaaag tgacgaaatg aatgtgggca gcgagacgct
     4801 ggtaaaatta ctgcaacaag ctcgagatga caaaaatgtg gaaggcttaa ttctacgcat
     4861 taacagcccc ggcggcagtg ctgtggcgtc tgaactgatt cgccaagaag tggaagcctt
     4921 tcaacaagcc ggcaaaccgg tggttgcttc aatgggcgga atggcagcat cgggcggtta
     4981 ttggattgcg gctaccagcg ataaaattat tgctagcccg aatacgctta ccggctctat
     5041 cggtattttc ggtttagcag taacttttga aaaaaccgct aaaaatctcg gtgtgagcga
     5101 agacggcata gcgacttctg ccctagcaca acaagccggt ttaaaaagcc taccgcaaga
     5161 gcaggcagaa gtgctgcaaa ttgggattga aaacggctac gaccgttttt tagagctggt
     5221 ttctcgtggc aggaaaatgc caaaagaggt ggtagataaa gtggctcaag ggcaagtgtg
     5281 gctgggaact gatgcgttaa aacacggatt ggttgatgag ttgggcaatt ttaatgtggc
     5341 atataatgcg ttatctgaat tgatcaacca aaaacgtgaa gcggaaaacc aacctaaagt
     5401 cgaacagttc ggcttacaat ggtttgcgga gcaagatgac agcttatttg gcacgcttgc
     5461 ccgtgatttc aaagctcaat tacaatttag cgtggcaaat tggcttgatt taccgctgtt
     5521 gaagcaaccg caacaacagc tagagactct ttcacgtttt aacgatccga aacagatgta
     5581 tctttactgt ttaaattgtg ggaagataga ttaattattg aatttaaggg caggttttca
     5641 cctgccctct taaattacca ttgataacga taatttacta atacattaaa tggttgtttc
     5701 agtttcttac ctgaagcaac tgatgcctct aaacctaaac ggtgattacc gtttcctgca
     5761 ctcaagccaa gtgaaccttg cactctgccc ttgttttcgg caactccaaa ctgatattgg
     5821 tttacttgca ctttcgtact attggccttt ttcagcaatg ccgtttactt ccgcataagg
     5881 ttgcagattc caaccattat tcaaggcaaa gccttttgct actcttacgc cggcacgggc
     5941 aactaaaaga tttaaccgtt cctcatcggc tttaccgtta atggtgtggt aggcaagttg
     6001 agcttgtggt gttactaccc agtcattgtt taaaacaagc gactcaattt tagcaaattt
     6061 tcactccaat tgaaccgctt atctttctat tttgtgaacc tcctcacaaa aatggtgctg
     6121 agaaaaatca ctaacatcac tggaatggtt aagccgagta gtaaatgcac ttggtggtaa
     6181 gagagaaggt ggtatagcac gaagccgaca agccataatc cggcagcaac ccaatcaaca
     6241 ttaggctgtg cttggtggcg ttttaacaca aagaaatccg caatttgcac ggcaatcatc
     6301 ggggcgaata ccgagcctat cagcagcagg aaattttcat attgggtaac cggtaaactg
     6361 attgccagta gcgtgccgat gattgtgact agaatggcgg ttggggtttc tttgaatttt
     6421 gccgtgatat tgccggcact gacaccggcg gaataggcat caagaaacgt ggtagtcaca
     6481 gtcgaaagaa tcatcaccat aatgccgata aggctcattc ctgtcattag taacataggg
     6541 gcaatttcgg tttgcccggt aaatagcacc atacccagac ctaacgcata catccacgca
     6601 ctggtgatca aatagcctat ggtcgccgaa agggtcgcgg caaaaggctt tttcgcttta
     6661 gcggtatagt ctgataccaa aggtagccac gaaagaggca taatagttgc taattccact
     6721 gcggtgctaa acggcatttc acccgaaaca ggaaaatttt cctgcccatt caatacctta
     6781 atgcttagcc ataaggtgag caaaaacatc gctatcaatg tcactaactt gaattttccg
     6841 acctgattag agccggtaaa taaccatagc acaatcagca acccaagcac gattgcccaa
     6901 agcgagaaag ccgaatattc ccataaggca aggctaaggg cattactgat ctctgcccct
     6961 gtatagatca taatggctgt ccaaccaaca agctgtagca cattggcaag ggagaaaaac
     7021 accgagcctc tgccaaagga aatttgcacc gtttgcatcg catttttgcc ggttttcgcc
     7081 ccaattaagc cggcagcaaa aaacaaaatg ccgcctaata aatgccctag cactatcgcc
     7141 agcaagcctt gttgccagcc aagtggggca atccaagtgc caaccacgat tgcactggca
     7201 ctaatgcccg ctcccgccca aatcaaacca ctgtttagcg tactaagagt tctattcatt
     7261 acggcctcca tttgcaaatt ttgctaagtt tttgaccgct tgttgccaat cttttgcttg
     7321 ggtaacggca cttaccaccg cggcactgcc gacaccggta tgcattacat tttcaatgct
     7381 ttgctcatta attccaccaa tcgccacagt tggaatgtta agcggtgcaa cgagagcaac
     7441 atatttggct aaatttgtta agccttgtgg ttgagacggc attactttgg tttgagtagg
     7501 gaaaacgtgg ccaaaagcga tataagacgg tttcaccgcc aatgcccgca ttatttcaaa
     7561 gtagcagtgg gttgaaacac caagccgtaa cccagattgc tgaattgcat ttaaatcggc
     7621 ggtggctaaa tcctcctgcc ctaaatgcac gccgtaagcc tgatacttca tggctaactg
     7681 ccagtaatca tttacaaaca aacgcacatt gtgctgtttc gccagtgcga ccgaatgggc
     7741 aatttcttgc tcaatctctg caagcggtcg atttttgatt ctaatttgca aggtttttac
     7801 ccctacaaga attaagcgtt caagccattt aacgctatct acaacagggt aaagcccaag
     7861 ttgatattcc gttggagcaa aaggctcttt cggcaattta agaggggcag aaatcagctc
     7921 ggtttgtggg aagaaagcga tatcatcagg gtagccggtg tggcaaagtg aacttaaagc
     7981 agtttgccct ctgccttgtt tttccgataa gcctttttgc aaataagcgg tggcaacagt
     8041 gacggcatca gctaaatcaa agccggttgc caacatcgct ccaaccgctg aagcataggt
     8101 gcaacctgtg ccatgggtat tcacactttg ctgtcgggcg tgactaaagg cataaatttc
     8161 atttgcagtc agcagataat ctcttaccgt ttcccccagc cattcaaaat gtccaccttt
     8221 ggctaacacg gctttgattc cctgtgcaaa cagtttgtgg ctagcggttt tcacatcacc
     8281 aaaggtctgg atttctgtgt cgcttaataa agcgagttca gtgccgtttg gagtgattaa
     8341 atccaccagc ggatacaatt tttgttgcac tatctgcaat aaaatactgt cggataacgc
     8401 ctgcccactg cttgccactg ccacagggtc gtaaaccaca taacaataat gcgagctttc
     8461 tgcacggatt ttttggatat attcacacaa gatctctact tgtgcttgcg agcagagtaa
     8521 gccgattttg attgcgttcg ggtagccttg aaccagcaag gcttcaaact gttggcggaa
     8581 ggtgtgatca tcaacaggcg ttacacacag cacaccgtgc ggatgttgag ccgttacaga
     8641 agtaactact gaacaaccca ctaggttaaa atcgtgaaag gtatgtaaat cggtttgcag
     8701 accggcaccg gcacaggaat ctgagccggc aaccgtccaa atgacgttag gttggtatgg
     8761 agagtttgaa taattagaca tcgcaaaatc ctcataatat gcttagggtt ttgcttgcca
     8821 gagatgtggt aatgatccca aaatctgaat ttgggtaaaa cttgttccct acgcaggtac
     8881 taacctacag gttccacgga tctcgctgtt gcgatctcag ccttacggca ctccgacaag
     8941 cgtttttagt atagcttaca agcggttatt ttttataaaa aaatgcaaaa tatccgttgt
     9001 gaagtctatt agagggaaat ttgcattccc tcatcttggg gcaaggtggt aacttgcccc
     9061 gtcgttaagt gagtggtttt ttatatctcc tctaattcca aatctttggt ttcgtggact
     9121 tgccacaatg cccagaagct cagtaatgag gcaaccgata aatagccgcc tacaccgaat
     9181 aagccgaaat tttcattgat tttgaccgca ataatagtga acacgctagc tcctaaaata
     9241 ccggcagcgg tgtaggcaag cgaagcccct gtgtaacgta cttctgttgg gaagagttcg
     9301 ggtagaatta ctgccatcgg gccgaagctt aagccgatta agatcattcc aatggtgagg
     9361 aaaataaaga tcgaagtcgg tgtgccgttt tcgaggaaaa acggcattgt taagccgtaa
     9421 actacggttg ctcctgtggc aagtaacagc agtaaacggc gtccgatttt gtctgaataa
     9481 atgccggaga agaaaatcgc aatgccgaaa atcacggagg taatcagcaa atattgggtg
     9541 tagagattta ccggtaaacc taagcctgta gcgtgtcctg cttgagaaac tgccaccggg
     9601 cttttgacga aaatcggggt gaaagcaact aaaatgtaga acaacacata gccggcggtg
     9661 gcaatcagca cgccgatcat aaaaggcttg aggtgttggc taaacaaagt tttaagcggg
     9721 gtatggcggt ttttaccttg ttgttccgct ttaaggaaaa tcgggctttc gctgatctta
     9781 attcggatat aaagcccaat ggcgatcatc acaatagaag cgacaaacgg aattcgccac
     9841 gcccaatcca agaaggtttg ttcaccgtaa attaaattca ccaagtagaa cgctccgttt
     9901 gccaacagca agccgattgg ggcgcccatt tgcggaaaaa taccaaaaaa tgcccgcttg
     9961 tgtttcgggg cgtgttcagt ggcaacgaga gcagctccgc cccattcgcc gcctaagcct
    10021 aaaccttgtc cgattctaca gaggcagagt aacacggttg cccaaatgcc aatggcggca
    10081 taattaggca aaagcccgat tgctacggta gataagccca ttaataagag cgaggcaatc
    10141 agagtttgtt tgcgtccgta tttatcgccg aaatgcccga ataaaatcga ccccatcggg
    10201 cgggtgaaaa aggcaagagc tagtacggaa agcgacatta attggttgga aaccggatca
    10261 tcgctattaa aaaactgcac attaaacacc agcactgctg ccatcgtgta gatgtagtta
    10321 tcaaaatatt caatcgccgt gccgaccatt gaggcaaccg ccactttagt tgggtttgag
    10381 tgagttttag acatattcaa ccctcacata ttgctcaacg gtttcaggcg ttaatgcccc
    10441 aagggtatcc agcagattga cggcaaattg cccgtattga gttggtttga gtgcttgagc
    10501 agccacttcg cctgcaacgg cataagcggc gcaagcctca ataagtgcgt tgaaatagtg
    10561 ctctttgtcg gcaacggcta agaatgcccc gcataccgca cttaataaac agcctgaagc
    10621 ggtaattttg gggaacatcg ggctgccgtt gtgcaataaa gctgtgtgtg agccagagct
    10681 taccacatcg gtttcaccac tgattgcgac taaggtttgg taacgtttgg caatctgttg
    10741 ggcgatttca accacattat gcgagccttc gccggcatca acgcctttgg cttgccattc
    10801 tacaccggcg agggtagcta gttcccccgc atttccacga atggcggtga agtgaatttg
    10861 gtcgactaag gtttcaactg tttgacggcg gaaaggtgtt gctccaacgc cgacagggtc
    10921 aagaatgagc ggaataccta aacggttggc ggttttgcca gcaagctcca ttgcttctac
    10981 ttctttgccg ataagcgtgc cgatattaat caccacggcg ttactgagtg ccggcacgga
    11041 ttccatctcc tcaatagcag ctgccataat gggagaagca ccaagagcca ataagccgtt
    11101 ggcagaaaaa ttagcggcaa caatgttggt aatgttgtga acaagcggtc gattttgtcg
    11161 aattttttgc aaataatgcg agtgataggg gagtgatgtg gtcatcgttt attccttaat
    11221 atgattgaaa aacaacgcac caacaccaac ggggaataga tgggtttacg cctttagttt
    11281 cctacgtcag tgctaactgc atcaggttca acgggtattt ctcagcttgc ccttaggcaa
    11341 gcaccccgac taaatgaggc tttaatataa tcactaaaaa agcggttgta aagggctaca
    11401 actgcagttt tcaattaagc tgcttctcgg tgatagaaac gcaagctgtg ctctttttgg
    11461 cgggcggaac taaaggcgga gactcgtttt aaatagccga ttacccgagt gccgtaatca
    11521 atattatcgg agccacattt gctacaactg tgcaacgtgc gtttgtcgat gtggctacat
    11581 tcgttgcaaa tcgtgatttt aacgttaata caaaaataat tgcagccggt tttagcggcg
    11641 gtatccagca aggagcgata tccggtttgg gttaaggctt cgtctaaatt caagtgtaga
    11701 gcggagcctc cgtccagcca ttcaatcagc tctctgccgt gcagtaagaa tttatccaaa
    11761 gcattaattt cttcatcttc taccacatag aaataggaat tgtagcaatc tcgtggtacg
    11821 aaatagccgt cctctttgtc ccatttggcg tttttgaccc ctaaattttc agcaggcaca
    11881 aattcggtat taaattttac cccatacttt tcaccggctg cttggttagc ttggaaaata
    11941 atttttaacc gagattgcac aaaatcaata tagtctggat tgtaacctac ggttaaacct
    12001 tgtgattcag cagcttctgc cattccgtta atgccaatag tcaggaattg tttatgcagt
    12061 gaaataaaac cggcatcgta aaccggcaac ataccggcag ctaaatactc ttccatcagt
    12121 ttgcggtaag cgtattgata tttatggatc ttgctgactt cttcgcttaa atcacggtta
    12181 tcttgcacca aacggttcat attaatagta attacattga ttgaacctgt cgcaacacct
    12241 ccagccccta atgaatagga gaagctatga tcgctgattt catttctcaa gcggcagcaa
    12301 gaagcaaggg aatccggatt atctgattga taaataaaga atgaattgcc ttgagatagc
    12361 tcttttgcca tttgattggc aaactcgtca tctttacatt tgcccttttc ggtaagcatt
    12421 gctgcggtca caacagggaa agtgagaatc gctttgcttc gctctttatt gaaccattgc
    12481 ataaagaaaa gttgtaattt tgaagtggtt tcccaatttg gtttctcaaa atcaggaaaa
    12541 acaaaacggc taaacatcgc ttcaaaatag aatttgtcat acactgaaat attccaaaag
    12601 acgctttgat aaccacgagc ggctgccggt tggttgatgc tatacacaac ctgctgcagg
    12661 tggttttcaa tatctgaacg atgagtctgt aagtaattat cgccgtaatc tttgcgggca
    12721 aaatagtcaa aataggtcag aaattcaacc gtggcgactg caccggcaaa ctgagaactg
    12781 actgcaaaga caaaattgat aaaagaaccg cagaatgagg ctaaatgttt cggggctttg
    12841 gattcgccgc cgagtttagt caaaccatca cgcaagaaag ggtacatagt gactgaaacg
    12901 cagtagggtt ttaggctggt ttcatcgtgt acgtaaattt cgtgtgcttc gatttgacgt
    12961 aaatattcac aagcggtttc ttttccaaaa atttttgcaa ttttttcact cacttttgct
    13021 cggttgattt gcacaaaaaa atctttcatt agctcctgtt ccattgtcgc tatgtttttt
    13081 tgcgtgacgt tagcgttggc gtccattttt gaaccgtctg cggcattttt ggcttgaata
    13141 tattggttaa tgaaatgtag ttttccgtct aattgtgtcg gttgtaagcg aatcatattg
    13201 aagctcctcg aataaaaaga tggttaagat tttggttatt gcgtaaatca gtaaagcgtt
    13261 ggttggtggt taaactttcc aatcctcctc gttcggcaat ccaacgcccg gtttttaagt
    13321 aggttagctc gtgtaataaa gtctcggcga tttcgtgctg ctccaaacca ctataaagac
    13381 aggtgtttag cccctgtttt tttgccagtt gcaacagcgg cagtaatttt tctgcttccc
    13441 attctccgcc cataaacaat acgcagctaa ttaagccttg gtagcgtttt aggcgttcag
    13501 agagatattc actgctaagc tctttcccaa gacaggcttt ccagctatcc gcactatggc
    13561 aacctttaca gccaagcggg cagcctgtaa tcagaaaagc aagtgaggtc tcattcggca
    13621 cttcttgcca aacaatttgt tccgagctga atctgagatt ttccattact aattcattaa
    13681 cacaatatat tgtgtttttt aacattattt aacactatat atagtatgtt agatctgttg
    13741 aatgggaaaa taaagagcaa taagtgaaaa aaaagagttg aaatttgaag aaatgaataa
    13801 aatcaaaagg atagcgaatg ataaatttta agcataaaaa agccgtgtat ttttttacac
    13861 ggcgaatgaa aagtctgatt aattgatttc aatgatatca aacagttttt ctaattgatg
    13921 gcttaaaaga gagagtggac gtttacttgc taatgtaaaa tttaggttaa aggcgctgtc
    13981 tgttgattct acatttaagc atttcacctc aaaaccacgg tgacgtataa cccgtaaaat
    14041 acgctctaag gtttcagggc gtttgttagc tttaagcgtt aattgatatt cttccatctt
    14101 attctcctat acctcatcgt ctaacatatc ggcattacac gcccccggcg gtaccagtgg
    14161 ccaaacgtta tcttcctgtg gaatacaaac gtgaagtaag taagcccctt tggcattgaa
    14221 cattctgtct attgcatctg acacttcgct cgctttctca attcgctcac cgtcaatatc
    14281 aaaggctttc gccaacaaca caaaatcagg gttatcatct aaaatggttt ggctgtgtcg
    14341 cccgtggaag aacagcgatt gccattggcg aaccatacct aaacgttggt tatccagtaa
    14401 taggattttg accgctaaat cagctctttt aagcgtgccg agttcttgaa tattcatcat
    14461 aatcgagcca tcaccggtaa ttaaaataac ctgatcttcc gctcgagctt tgattgcccc
    14521 aatcgccgca ggcaagccaa aacccataga gccaaaaccg gcagaggtga tatagttttt
    14581 cggatcgtga taagttaaat gttgtgccga ccacatttga tgctgcccta catcggtagt
    14641 gacgatgctg tttttggctt tccgctgtga aagcgtgtgt aataacgcca cggcatcaat
    14701 attgccatca ccactatttt cttgatattg aaagtcaaat tgctgcttta aattacgcac
    14761 atcttcacgc catggttcaa tatctaacgg ttgagccaag taattcacgg cttcaatcaa
    14821 attccctttt aaggcaactt gtgcttgacg gagcttgttg atttccgcat tgtcgatatc
    14881 aatgtgaatc actttagcgt gaggggcaaa agtgtctaat ttgccggtaa cacggtcatc
    14941 aaagcgggca ccacaggcaa tgagtaaatc acactcttgt accgcgtaat ttgctgcttt
    15001 tgtgccgtgc ataccgatca ttcccatata gagcggatcg gttggatcga tagtgcctaa
    15061 cccttttaag gtagaaacag acggaatatt tgcaattttt acaaaatttc tgaccgcttg
    15121 tacaccatca gccatactaa cgccaccgcc gacataaagt accgggcgtt tggcggtggc
    15181 taataattgt ttggcaacca ctaatttgtt gggatcttgt gcatcggcag gttctttagg
    15241 ataaacgata ggcagagccg aagtttgagc tagttgcaca tcacgtggaa tatcgaccag
    15301 caccggacca ggtctgccac tttgtgcaat ttggaatgcg agggctaaaa tttcagggag
    15361 ctcctcaata ttctgaacaa taaaactgtg tttagtgcaa gcgagtgaca aacctagtac
    15421 atcagcttct tggaaggcat cagtgccgat taaatggctg gcaacttgtc cggtaattgc
    15481 taccacagga atagaatcaa gtgcggcatc gcctaaaccg gtgattaaat tagttgcccc
    15541 agggccggag gtcgcaatac aaacccctac tttacctgtt gcacgggcat aaccgatagc
    15601 tgccattgca gcaccttgtt cattgcggca aagtaaatga tctaagcctg aatcataaat
    15661 tgcatcatag gtaggcataa tagccccgcc cggatagcca aaaagtgtcg ttaccccgtg
    15721 agcttttaaa ctctcggtga taaatcttgc tccattcatg gatgttgtgt ccttaatatt
    15781 ttta
//
LOCUS       DANMCL010000070        15655 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.070, whole genome shotgun sequence.
ACCESSION   DANMCL010000070 DANMCL010000000
VERSION     DANMCL010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15655
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.070"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(53..1093)
                     /locus_tag="PXF40_001915"
     CDS             complement(53..1093)
                     /locus_tag="PXF40_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HDL5803231.1"
                     /translation="MQTTLSPQQIAKKHRTIEKKRSFLLLFFLLICLLSLIFDIMTGP
                     SLLPFNEVWKALFQLGEIEETTKVIVYELRLPMAIMALVVGAALGVGGAEIQTLLNNP
                     MASPYTLGLAAAAGFGASIVIAFGGFGLPTEISVPVGAFVMTLFSSAILFAFSSLGRF
                     SSAILVLVGIALLFLFQSLLSLVQFISAPEVSQQILFWLFGNLTKATWQTISIAFGVT
                     TVCILLLFKDAWKLTALRLGEARALSLGINLTWLRMKTLLIVSVMTATCISFVGIIGF
                     IGLVAPHIARMLLGEDQRFFLPGSMLVGAAFLSMSSVLSKSLVPGALFPVGIITALVG
                     VQFFFWIVLAKR"
     gene            complement(1182..1772)
                     /locus_tag="PXF40_001916"
     CDS             complement(1182..1772)
                     /locus_tag="PXF40_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein phosphodiesterase"
                     /protein_id="HDL5803232.1"
                     /translation="MNFLTHSLISLEIDTQTKQQTLYGNFAGDFYKGLIPHLNLADNL
                     KSGVVLHRSIDKISDRPDSLTTQLLQGTFGRYKGIVSDIMIDHFLAKHFQRLFAKDLN
                     EVQAQIFQQIEQQRTIFPEQFVPMFNWLQSRKALTHYADLDFLEQVFLGMSSRVKKGE
                     ILRNAVTEIWQNYTLLEEAAIQEFFTVKDRATRELS"
     gene            complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXF40_001917"
                     /pseudo
     CDS             complement(1773..3146)
                     /gene="modF"
                     /locus_tag="PXF40_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253358.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
     gene            complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXF40_001918"
     CDS             complement(3264..4217)
                     /gene="fmt"
                     /locus_tag="PXF40_001918"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HDL5803233.1"
                     /translation="MSKLNIIFAGTPDFAAQHLQALLDSEHNVIAVYTQPDKPAGRGK
                     KLQASPVKQLAEAHNIPVYQPKSLRKEEAQAELKALNADVMVVVAYGLILPEAVLNAP
                     KYGCLNVHGSLLPRWRGAAPIQRSIWAGDTETGVTIMLMDVGLDTGDMLHKVTTPIEP
                     NETSASLYAKLAELAPLALLEVLNGLANHTFKAEKQDEALSNYAEKLSKEEAKLDWQL
                     PAVQLERNIRAFNPWPFSFLTLTVDGVEQSIKIHQATVLPHQEKAAGTVINVDKTGIQ
                     IATQQGVLNITQLQPAGKKPMSVQDFLNGRADWFVSGTQLS"
     gene            4332..4943
                     /locus_tag="PXF40_001919"
     CDS             4332..4943
                     /locus_tag="PXF40_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HDL5803234.1"
                     /translation="MEFFIPKADTIFEEEIKKSRFITYLRHTEGMEQAKAFWQELKIQ
                     HPHARHWCWATVAGLPNDSQQYGFSDDGEPSGTAGKPMLNYLLGSGLGEITAVVVRYY
                     GGIQLGTGGLVKAYGNGVQQALLQLERIRKVLRKNYRLQCEYEQFNTISHLISEKDIV
                     IVEQLFSDKVDLLLAFNPSEVEAFADELTQRFSGKLALIKEEI"
     gene            4947..6431
                     /locus_tag="PXF40_001920"
     CDS             4947..6431
                     /locus_tag="PXF40_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter"
                     /protein_id="HDL5803235.1"
                     /translation="MQFFSIIRIVGILVMCFSFTMLVPATVALIYGDGGGRAFLEAFA
                     LNFMVGTLLWWLCRDNKNELRSREGFLIVVLFWVVLGLLGAVPFIILENPDLNVAESI
                     FESFSGLTTTGATVITGLDSLPKAILFYRQFLQWLGGMGIIVLAVAIIPLLGIGGMQL
                     YRAEMPGPLKEQKMRPRIAETAKALWLIYLSLTILCAVAFWLAGMTVFDAISHSFSTV
                     SIGGFSTHDASIGYFNNAAISYITVFFLLLSACNFALHFAVIDRIRDAQSRKKGGILS
                     RLYWGDYEFRFFLMVQLGLFLVCTLVLVGYGYFDNTSVTIEQALFQSVSISTTAGFTT
                     NDFSQWSSFLPTLLVLSSFIGGCAGSTGGGLKVIRVLLLYLQSKREIHRYIHPNVIQP
                     IKLGNHVLSERVVDGIWAFFSAYFFVFVICWLATIACGMETFDALNAVIASLNNLGPA
                     LGSVSSNFTQVPDSAKLVLTFAMVCGRLEVFTLLVILSPVFWKD"
     gene            6432..6959
                     /gene="hemG"
                     /locus_tag="PXF40_001921"
     CDS             6432..6959
                     /gene="hemG"
                     /locus_tag="PXF40_001921"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HDL5803236.1"
                     /translation="MKTLILYFTTDGQTKKIAERLADVITHEVELISLKDQAVDFAEK
                     IANADQIVIGASIRYGHFNPLVYQFVEQHYPALNAKKTAFYGVNLTARKDNRNTPETN
                     TYVRKFLAKVKWKPTHIEVIAGALLYLRYKPFDRLMIRFIMKITKGETDTSKEYEYTD
                     WQQVENFGKLLANQL"
     gene            7091..7486
                     /gene="mscL"
                     /locus_tag="PXF40_001922"
     CDS             7091..7486
                     /gene="mscL"
                     /locus_tag="PXF40_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HDL5803237.1"
                     /translation="MSILKEFREFAVKGNVVDMAVGVIIGGAFGKIVSSLVSDVVMPP
                     IGWLIGGVDFKDLAIEIAPAKEGAEAVMLKYGAFIQNVFDFLIIALAVFGMVKVINSL
                     KKAPVVEEAPAEPTAEEKLLTEIRDLLKK"
     gene            complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXF40_001923"
     CDS             complement(7599..7862)
                     /gene="rpsT"
                     /locus_tag="PXF40_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HDL5803238.1"
                     /translation="MANIKSAKKRAVQSEKRRQHNASQRSMMRTFIKKVYAAVAAGDK
                     AAAQTAFVEMQKVVDRMASKNLIHANKAANHKSKLAAQIKKLA"
     gene            8126..9700
                     /gene="murJ"
                     /locus_tag="PXF40_001924"
     CDS             8126..9700
                     /gene="murJ"
                     /locus_tag="PXF40_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HDL5803239.1"
                     /translation="MSKKLLRSGMIVSFMTLISRILGLIRDIVVATILGTGVSADIFL
                     FANRIPNFLRRLFAEGAFSKAFVPVLAEYNADNDPNKTREFIAKVSGTLGGLVTVVTL
                     VAMIASPVVAALFGTGWFLDWLYDGPNAEKFTQASFLLKITFPYLWFITFVALSGAVL
                     NTIGKFGVMAFSPVLLNVAIIAVALWGRDYFDSPDIALAWGVFLGGLLQFLFQIPFMK
                     KEGLLVKPKWAWKDEGVTKVRKLMIPALFGVSVTQLNLLLNQVIASFLITGSISWMYY
                     ADRLIEFPLGLFGIAISTVVLPSLSRIAKNKELTEIQRGEHFQNTMDWGVRMVLLLGI
                     PAMIGMAVLAQPIIMTMFMRGKFGFEDVLATSYPLWVMCLGLNSYMLISVLANGFYAN
                     QNTKTPVKVGIIAALSNICFGLAFAPFLGYIGLALASACSALVNVSLLYVNLSKNGYY
                     KVSHKTVLFVLKLFIAACVMGALVAYFTPEIELWALMTMWQKVYWLIWLMILAGGSYF
                     ASILVLGIRKKDFRSA"
     gene            9702..10169
                     /locus_tag="PXF40_001925"
     CDS             9702..10169
                     /locus_tag="PXF40_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HDL5803240.1"
                     /translation="MKSLKLKIPPPAWFLLCAALMWLVAQYVPVSLPNYQHTAIFFSG
                     LAVAIIGGAVAVSALWVIHQAKTTYSPFRPQHTAKLVTWGIYRKSRNPMYLSLLLGLI
                     AWALWLGAMLAWLVLPLFVWLITYFQIKPEEQILAQKFGTHYAKYCNQVRRWL"
     gene            complement(10234..12243)
                     /locus_tag="PXF40_001926"
     CDS             complement(10234..12243)
                     /locus_tag="PXF40_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HDL5803241.1"
                     /translation="MDLIKKLNTGSTFRVPIFLPSLLFVSFVAVFCIIFPQQAQTSLD
                     TIKNSLFQHFSWFYIFAGSIFFLFLIFLSFSRLGDIKLGADTDEPEFGFGSWIAMLFA
                     AGMGIGLMYFGVAEPILHYLKPVQQNLTEPERMKEAMMTTFYHWGIHAWAIYGVIALA
                     LAYFGFRYKLALTIRSGFYPLLKHRISGFWGHLIDIIALCSTIFGLTTTLGFGVMQVS
                     AGFNNLGLIEQSNFTVLAIIVTVAMALAVLSAVSGVGKGVKILSEINLTLAGLLLIFV
                     IITGPTLLLFSSFTENLGYYFSSLLEMSFRTFAYEPEHQGWLSGWTVLYWAWWASWAP
                     FVGLFIAKISKGRTIREFILGVLFVPSLFNILWMTSFGSSAIWFDQQTAGALAEVSGN
                     TEQLLFTFFEQLPFGSIASFVAVIVISIFFITSADSGIFVLNSIASQGEENAPKWQSV
                     LWGALLAILALSLLYSGGLASLQTMTLIIALPFTFIMLILCIGLWKGLMVDNQYFNKK
                     FSQGSQHWAGKDWKQRLEKIINPSNKQDVRHFFIKVARPAFLELIEEFESYGLIAKMN
                     FTNEQNPKLEFEVVKENLRNFIYGIESVPRELSDLVVGDDNLPNIEQNTIYEPITYFL
                     DGRKGYDVQYMTKEELIADVLQQYERFINLAMDNSHDLMTADFNH"
     gene            12435..12970
                     /locus_tag="PXF40_001927"
                     /pseudo
     CDS             12435..12970
                     /locus_tag="PXF40_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251153.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            12998..13609
                     /locus_tag="PXF40_001928"
     CDS             12998..13609
                     /locus_tag="PXF40_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5803242.1"
                     /translation="MKYEAKPLIISPNHIQQRLHGKLLARALLIIALLMLAKFIYIAS
                     LSNYFTFYLMEKFQLNIAMAQLSLFTFLGAVALGAFVGGPIGDKIGRNAVIWFSFLGM
                     APFALLLPHADLFWTIVCAIFAGFIMSSAFSAMVVYAQEAVPGRVGLISGTMFGLMFG
                     IGGLSAAVLGFFADEYGLESIFKACAYLPLLGFAALGLPKRNI"
     gene            complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXF40_001929"
     CDS             complement(13620..14510)
                     /gene="rarD"
                     /locus_tag="PXF40_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5803243.1"
                     /translation="MNISGKLQGWHYALLCYLTWGTFPIYWYPINQSGMPAEQILAQR
                     VLWSALFAVFLLLIFQQGRAVINAFKQPKVLGLFVLSSFMIGVNWLVYLWAIVNEHIL
                     DASLGYFINPIFNVFVGRLILKEQLNKAQLLALLFAISGILWLAIPAGQIPWVALILA
                     ASFCIYGLIRKLAPMEPLSGLALETLLMSPFAITYLCFCYHQNILVFSELNPLQMAVL
                     LCSGIATTLPLLWFAMGARRISMSLLGMLQYISPTLQFLCGVLIFNETLSAERAVGYI
                     LVWIGVGVFLLGMKKAGVKR"
     gene            complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXF40_001930"
     CDS             complement(14592..15575)
                     /gene="epmA"
                     /locus_tag="PXF40_001930"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HDL5803244.1"
                     /translation="MNNLQLDNIDWQPTASIPHLIQRSKIITEIRKFFTDRGLLEVET
                     PILSEFSVTDVHLSTFNTQFQSPFSPEAKTLHLMTSPEYHMKRLLAAGSGPIFQLCKV
                     FRNEEAGKRHNPEFTMLEWYRPHFDMYRLINEVDDLLQQILDCEPAESFSYQFVFQTY
                     VGLDPLSATKAQLVEKARKHGLQCDDDEQRDTLLQFLFSEVVEANIGQERPTAVYHFP
                     STQAALAQISSEDHRVAERFEFYYKGLELCNGFHELDDADEQIHRFEQDNLQREKMGL
                     EPQQLDVRFLAALKAGFPNCSGVALGVDRLLMLAMDAEKIEEVISFGIEKA"
BASE COUNT         4389 a         3139 c         3470 g         4657 t
ORIGIN      
        1 ctaagtttcc acgcttaata gttacatcgt ttaagttgag catagaaaat ccttatcgtt
       61 tcgccaatac aatccagaaa aagaactgca caccgactaa tgccgtaata ataccgaccg
      121 gaaataatgc gcccggcaca aggctttttg atagcacgga tgacatcgat aaaaatgccg
      181 cacccactaa cattgaaccg ggcaggaaaa agcgttggtc ttcgcctagc aacattcggg
      241 caatatgcgg ggcaactaag ccaataaagc cgataatgcc tacaaagcta atgcaggtgg
      301 ccgtcattac agacacaatc agcaatgttt tcattcgtaa ccaagttaag ttaatgccta
      361 agctcaatgc tcgagcttcg cccaaacgca aggcagttaa tttccacgca tctttgaata
      421 ataataaaat acagactgta gttacgccaa aggcaattga gatagtctgc caagtagctt
      481 tagttaaatt accgaatagc caaaacagaa tttgttggga tacctcaggt gcagaaataa
      541 attgcaccaa tgacagtaaa gactgaaata aaaacaataa ggcaattcct accagcacta
      601 atattgccga gctaaaacgt cctaaagagg aaaaggcaaa taaaatggcg gaagaaaata
      661 gtgtcatcac aaaagccccg acaggtacag aaatttcggt gggtaaacca aatccaccaa
      721 aggcaatcac aatcgaagca ccaaagccgg ctgcagctgc taaacccaat gtataagggc
      781 ttgccattgg attattaagc aaagtttgaa tttcagctcc gccaacacca agtgctgctc
      841 caaccaccaa tgccattatt gccattggta agcgtagctc atagacaatc actttggtgg
      901 tttcttcaat ttcgcctaat tggaataagg ctttccaaac ttcattaaac ggaagcaggg
      961 aagggcctgt cataatatcg aaaatgaggc tgagtaaaca aatgagtaag aaaaagagta
     1021 ataaaaaact gcgtttcttt tcaatagttc ggtgcttttt agctatttgt tggggagaga
     1081 gcgttgtttg cataaaaatg taatgtttga gaattattat cagacaggat aagagaaaag
     1141 atcgataaat tcaagaatat ccaagatacc gactaaagta ttcaactaag ttctcgagta
     1201 gccctgtctt ttacagtaaa aaactcctga atagcggctt cttctaaaag agtataattc
     1261 tgccaaattt cggttacagc atttcttaaa atctcacctt tcttaactct tgatgacatt
     1321 cccaagaata cctgttctaa gaaatctaaa tcggcataat gagttaatgc ttttcgtgac
     1381 tgtaaccagt taaacatcgg cacaaattgt tcaggaaaaa tcgtgcgttg ttgttcgatt
     1441 tgctgaaaga tctgtgcttg tacctcattt aaatctttag caaataaccg ttggaaatgt
     1501 ttagcgagaa aatggtcgat cataatatcc gacacaatgc ctttataacg cccgaatgtg
     1561 ccttggagta attgggttgt gaggctgtcc ggtcggtccg aaatcttatc aatcgagcgg
     1621 tgtaacacca caccgctttt taagttatcc gctaaattga gatgcggaat taaaccttta
     1681 tagaaatcac cggcaaagtt gccatatagg gtctgttgct tggtttgggt gtcaatttca
     1741 agtgaaatca gcgaatgggt aagaaaattc atttatgctc caagtgcagt ttggtgatac
     1801 tcaaacccaa actcgttggt ttcgcctttc ggtacaaact caaataaatg cgtaatgcaa
     1861 tttggagcat cgctgtcttg gtgcgaaaca aaaagtagtt gcgtttggct gttagtcact
     1921 aattgttcaa tgaactgttt gactaatttg cggttaatgc cgtctaaacc ttgtaacggt
     1981 tcgtctagaa tcagaattga tgggtgtttc accattgctc gggtaatcaa aagtaagcgt
     2041 tgttgccccc acgagagaga gcgaaacggc tttttggcaa cattgcttaa attgaggcgt
     2101 tccaaccatt ccattgcttt taattgcaag gcattcggca cttgttgata cacgccgatg
     2161 ctgtcaaaaa agccagaaag aatgacctcc attgcggagc aatttacccg ataatccata
     2221 tgcaactggc tgctgacata gccgatattt ttcttaatat cccaaatggt ttcgccactt
     2281 ccccgttgtt tgccaaatag tcggacttta ttggcataag attgtgggtg atcgccggtg
     2341 ataatcgaaa gcaaggtcga tttcccagct ccattcgggc ctttaatcca ccagtgttgt
     2401 ttaggctgaa ccgtccaact taggttatct aaaatcttct tctccccata ttgaatattc
     2461 acattttcca actcaaacgg attgatgttt tccggcaggc tgagtagcgg agctgcacta
     2521 tcaggcagtg gcacattgac attctcttct gcaaatttta gctgagaata gaccgcttat
     2581 tgttcaattt ctgctcgctc tccttgcaga attaatgata aattatctaa taactcaata
     2641 tgattggcag catcaggaat atcgttaaaa cgatttacaa tcagcactaa cgccattttg
     2701 ctttgtagtt cggcaatcag ttgttgccaa tattgcaccg actgctgatc cagcccttca
     2761 aacggttcgt ctaaaatgaa taaatccggc tcgctcacta acatttggca aaatagcact
     2821 ttgcggcttt caccggtgga aaggtgcata aacgggcgtt caagcagatg ttgaatatgc
     2881 aatttgtggg catattcctc acataacgcc tcttttggac tgccatttaa aattacttgt
     2941 cgtgcggtta agccgaaatc atcgggcgag acactatcgt tgttccgatc tttgaaaatc
     3001 tgctccaaca ttttttgttg ttgctcgaaa gagaggagct gaatatgttg gaacgaatta
     3061 ccatagtcgc cggaatagag cgagatttta ccctgtaaag cgagtgaaaa agttgttttg
     3121 cctgaaccgt ttccgtctac gaccacctaa aagtcattgg gttggatctg taaggcgtca
     3181 atcgtgagtt tatgttgttt aaccagtgaa aatcgggcat tggttattgt aagtgaaggc
     3241 tgtgtttgca tatatttccc gttttaactt agttgtgtcc cgctgacgaa ccaatccgct
     3301 cgaccgttta agaaatcttg caccgacatt ggttttttac ccgccggttg aagttgggta
     3361 atattcagca cgccctgttg ggtggcaatt tgaatcccgg ttttatccac attaattacc
     3421 gtgccggctg ctttttcttg gtgaggtaac accgtggctt ggtgaatttt gatactttgc
     3481 tcaacgccat caacggttaa ggttaaaaaa ctaaacggcc aagggttaaa agctcggata
     3541 ttgcgttcca gttgaactgc tgggagttgc caatccaatt tagcttcttc tttggaaagt
     3601 ttctcggcgt aattggacag tgcttcatct tgtttttccg ctttgaatgt gtggttggct
     3661 aaaccgttta acacctcaag caatgccaga ggggcaagtt ctgccagttt ggcatacaag
     3721 gaggcggagg tttcattcgg ctcaatcggg gttgtgactt tatgtaacat atcaccggtg
     3781 tctaagccaa cgtccattag cataatggtt acgccggttt ctgtatcacc tgcccaaatc
     3841 gaacgctgaa tcggagctgc tccacgccag cgaggtagta gcgaaccgtg tacgtttagg
     3901 caaccatatt taggagcatt caatactgct tcaggtagaa ttaagccgta agctaccacc
     3961 accatcacat cggcatttag ggctttcagt tcagcttgag cctcttcctt acgcagggat
     4021 ttgggttggt aaacaggaat gttgtgagct tcggccagct gttttaccgg gctggcttgc
     4081 agttttttgc ctcgcccggc aggtttatcc ggctgagtat aaaccgcaat cacgttatgc
     4141 tcggaatcta ataaggcttg taaatgttga gcggcaaaat caggcgtgcc ggcaaaaata
     4201 atattgagtt ttgacatatt ttttattcgt tcaagttatc aatgaaagac ttattaaacc
     4261 attaaacagc acaaataaaa agtggcttga atatggtatc attgccacat tcaagataag
     4321 agaatcaaac aatggaattt tttatcccca aagcggatac aatttttgaa gaagagatta
     4381 aaaaaagccg atttatcacc taccttcgcc atactgaggg tatggagcag gccaaggcat
     4441 tttggcagga gctgaaaatt cagcatccgc acgcacgcca ttggtgttgg gcaacggtgg
     4501 caggcttgcc gaatgattcg caacaatacg gcttttcgga tgatggagaa ccgtctggta
     4561 cagcaggtaa gccaatgctc aattatttgc ttgggtcagg cttgggggaa attacagcgg
     4621 tggtggttcg ctactacggt ggtatccagc ttggcaccgg cggcttggtg aaagcctatg
     4681 gcaatggggt gcaacaggcg ttattgcagt tggagcggat tcgcaaagtt ttgcgaaaaa
     4741 actaccgctt gcaatgtgaa tatgagcagt ttaataccat ttctcatctc attagcgaga
     4801 aagatattgt gattgtcgag caacttttta gcgataaagt ggatttgttg ctggcattta
     4861 acccgagcga ggttgaggcc tttgcagatg aattaaccca acgcttttcg ggcaagctcg
     4921 cattaataaa agaagaaatc tagtctatgc aatttttttc cattattcgt attgttggca
     4981 ttttggtgat gtgtttttca ttcacaatgc ttgtgccggc aacggtcgcc ctaatttatg
     5041 gcgatggcgg tgggcgggcg tttttagaag ccttcgctct gaattttatg gtcggtacgc
     5101 tgctttggtg gctgtgccgt gacaacaaaa acgagctacg ttcccgtgag ggctttttga
     5161 ttgtagtact gttttgggtg gtgctgggtt tgctcggggc tgtgcctttt attattttgg
     5221 aaaaccccga tttaaacgtg gcggaatcca tttttgaatc cttttccggc ttaactacaa
     5281 cgggtgcaac cgtcatcacc ggcttagata gcttgcccaa agcgatttta ttctaccgcc
     5341 aatttttgca atggctaggg ggaatgggga tcattgtgtt agcggttgcg attattccgc
     5401 tgttaggcat tggtggaatg caactttatc gtgcggaaat gcccggaccg ctcaaagagc
     5461 agaaaatgcg acctcgcatt gcggaaacgg caaaagcgtt gtggctgatt tatctcagcc
     5521 tgacgattct gtgtgcggtc gcattttggc tcgccggaat gacggtgttt gatgccattt
     5581 cgcatagctt ttccacggtt tcgattggcg gattttctac ccacgatgcc agcatcggct
     5641 attttaataa tgcggcaatt agctatatta ccgtgttttt cctgctactt tctgcctgca
     5701 actttgcatt gcattttgcg gtgattgatc gcatacgaga tgcacaatca cgcaaaaaag
     5761 ggggtatttt aagccgcttg tattggggcg attacgagtt tcgttttttc ttgatggtgc
     5821 agttagggct tttcttggtt tgtaccttgg tgttagtggg ttacggttat ttcgataata
     5881 cctctgttac gattgagcaa gcgttgtttc aatcggtgtc catttccacc acggccggct
     5941 ttactaccaa tgattttagc caatggagtt cgtttttacc cacgctgttg gtgctgtctt
     6001 catttatcgg tggttgtgcc ggctcaaccg gtggcggctt gaaagtgatt cgggtgttgc
     6061 tgctttattt acaaagtaaa cgtgaaatcc accgctacat tcaccccaat gtgattcaac
     6121 cgattaaatt aggcaaccac gttttatcgg aacgggtggt tgatggtatt tgggcgtttt
     6181 tctcggcgta ctttttcgtg ttcgtgatct gctggcttgc taccatcgct tgtggaatgg
     6241 aaacctttga tgctctaaat gcggtaattg cctcactaaa taatctaggt cctgcattag
     6301 ggagcgtgag cagcaatttc acccaagtgc cggacagtgc caagttagtg ctgacttttg
     6361 caatggtatg cggacgtctg gaagtgttta ccttgctggt gattttaagc cctgtttttt
     6421 ggaaagatta aatgaaaacc ttaattctct attttacgac cgatggtcaa accaaaaaaa
     6481 ttgccgaacg attggcggac gtgattactc acgaagtcga gctgatttcg ctaaaagatc
     6541 aagcggtcga ttttgccgaa aaaattgcaa atgccgacca aattgtcatc ggtgcttcaa
     6601 ttcgctatgg gcattttaac ccgttggttt atcagtttgt ggaacagcat tatccggcat
     6661 taaacgccaa gaaaactgcc ttttacggtg tgaatttgac cgctcgcaaa gataatcgaa
     6721 acacgcctga aaccaatact tatgtgcgta aatttttagc taaagtgaaa tggaaaccaa
     6781 cccacattga ggtaattgct ggggcattac tttacctacg ctataagcca ttcgaccgat
     6841 tgatgattcg ctttattatg aaaattacca aaggcgaaac cgatacctcc aaagaatatg
     6901 agtacaccga ttggcagcag gtggagaatt ttggcaaatt attagccaat cagttataat
     6961 caaactgatc taaatcaaaa aaatgtaaat ttatttaaat gttgtagaaa ttttaaagat
     7021 tttgattata atcgccagcc cacgttcttg cgaagaccgt gtttaatcat tgaatgaaag
     7081 gaaagccccc ttgagtattt taaaagagtt ccgtgaattt gcggtaaaag gtaatgttgt
     7141 tgatatggct gtcggtgtga ttatcggcgg tgcattcggt aaaattgttt cttcattagt
     7201 tagcgatgtt gtaatgccac ctatcggttg gttaatcggt ggcgtggatt tcaaagattt
     7261 agccattgaa atcgccccgg caaaagaagg tgcggaagca gtgatgttaa aatacggtgc
     7321 atttatccaa aacgtatttg atttcttaat tatcgcactt gcggtattcg gtatggtgaa
     7381 agtgattaac tcactgaaaa aagctccagt tgtagaagaa gctcctgcag agccaacagc
     7441 ggaagagaaa ttattaactg aaatccgtga tttattgaaa aaataattaa ctgattttga
     7501 aacaagggct attttagaat atctagaata gccctttgtg ttatggttaa aaagaaaaaa
     7561 accaacataa agtcggtttt tttcatatct gttcgatatt acgctaattt tttgatttgc
     7621 gctgctaatt tagatttgtg gttagccgct ttgttagcgt ggattaagtt tttagatgcc
     7681 atacggtcta caactttttg catttcaacg aaagccgttt gagctgctgc tttatcgcct
     7741 gctgctactg ctgcatatac ttttttgatg aatgtacgca tcattgagcg ttggcttgcg
     7801 ttgtgttggc ggcgtttttc agattgaacc gcacgttttt ttgctgactt gatattagcc
     7861 aaggtcaaac tcctaaaata tctgtgtaaa aattagatat aaacaaaatc gttgtttata
     7921 ttgcctatcg atagttttta attcattttc aacgagacac gtgcttgaaa ataacaccgt
     7981 ttttctgata gaaaacgata gggcgagatt ttaacagttt ttttctgatt ttcctataac
     8041 aaactgctaa aattatgatc gatttttagg atcagactac aagcggtctg atttttcaat
     8101 aattttacta atattactct ttattatgag caaaaaactt ttaagatcag gaatgatcgt
     8161 aagctttatg accttaattt ctcgcatact cggtttgatt cgagacattg tggtggcaac
     8221 cattttaggc acaggcgtga gtgccgatat tttcctgttt gccaaccgta ttcccaattt
     8281 tcttcgccgt ttgtttgccg aaggggcatt ttctaaagcc tttgtgccgg tgttggcgga
     8341 atataatgcg gataacgatc caaacaaaac gagagaattt attgccaaag tatcgggtac
     8401 attaggaggt ttggtaactg ttgttaccct tgtggcaatg attgcctcgc ctgtggttgc
     8461 cgctcttttt ggtacaggtt ggtttttaga ttggctttac gacgggccaa atgccgaaaa
     8521 attcacccaa gcctcttttt tgctcaaaat cactttccct tatttgtggt ttattacctt
     8581 tgtggcgtta tccggtgcgg tgttaaatac catcggtaag tttggggtga tggcattttc
     8641 cccggtgttg ctgaatgtgg cgattatcgc ggtagcgtta tggggcagag attatttcga
     8701 ttccccggat attgccttag cgtggggggt atttttaggc ggcttattgc aatttttatt
     8761 ccaaattcca tttatgaaaa aagagggctt actggttaag ccaaaatggg cgtggaaaga
     8821 cgaaggtgtc actaaagtcc gtaaattaat gattccggct ttatttggcg tttccgttac
     8881 ccagctaaat ttactgctaa accaagtgat tgcctcgttt ttgattaccg gctcgattag
     8941 ttggatgtat tatgccgacc gcttaattga atttccgctc ggtttatttg gaattgcgat
     9001 ttccaccgtc gtgctgccaa gcctttcccg tattgcgaaa aacaaagaac tcactgaaat
     9061 ccaacgtgga gaacactttc aaaacacaat ggattggggg gtgagaatgg tgctgttgct
     9121 cggcattccg gcaatgatcg gtatggcagt gctggctcag ccgattatta tgacaatgtt
     9181 tatgcggggt aaatttggtt ttgaagatgt gctggcaacc tcttatccac tttgggtaat
     9241 gtgcttgggg ttaaacagct atatgttgat tagcgtgctg gcaaacggtt tttatgccaa
     9301 ccaaaacacc aaaacaccgg taaaagttgg gattattgcc gccttaagta atatttgctt
     9361 tggcttggcg tttgctccgt ttttgggata cattggttta gcgttagctt ctgcgtgttc
     9421 ggcattagtg aatgtgagct tgctgtatgt gaatctctca aaaaatggtt actataaagt
     9481 aagccataaa accgtgcttt ttgtgttgaa actattcatc gccgcttgtg taatgggggc
     9541 gttggttgcc tatttcacgc ctgagattga actttgggca ttaatgacaa tgtggcagaa
     9601 agtgtattgg ctgatttggc tgatgatctt agccggcggt agttattttg cctctatttt
     9661 ggtattaggc attcgtaaaa aagatttccg ctcggcataa aatgaaatca ttaaaactga
     9721 aaatcccgcc gccggcttgg ttcttgcttt gtgccgcttt aatgtggctg gtagctcaat
     9781 atgtgccggt gagcttgccg aattatcagc atacagccat attttttagc ggtttagctg
     9841 tggcgataat tggcggagcg gttgccgtct cggcactttg ggtcatacac caagcgaaaa
     9901 cgacatacag tccttttcga ccacaacata ccgctaaatt ggtcacttgg ggcatttacc
     9961 gcaaaagccg aaacccaatg tatctttcgt tactattagg tttgattgcg tgggcattat
    10021 ggttgggggc aatgttggcg tggctggttt taccgctgtt tgtatggttg ataacctatt
    10081 tccaaatcaa gccggaagag caaattttag cccaaaaatt cggcacacat tatgccaaat
    10141 attgcaacca agtaaggcgt tggctttaaa tgcaagcggt gagattttgt tggaaatttg
    10201 caaatttttc cgaaaatctc accgcttgtg gggttagtga ttgaaatcag ccgtcattaa
    10261 gtcgtgcgag ttgtccatcg ctaaattgat aaagcgttca tactgttgca gcacgtcggc
    10321 aatcaactct tctttggtca tatattgcac atcataacct ttccgcccgt ctaagaaata
    10381 agtaatcggc tcgtaaatgg tattttgctc aatgttcggt aggttgtcgt cacctaccac
    10441 caaatccgat aattcccgtg gcacactttc aatgccgtaa atgaaattgc gtaaattttc
    10501 tttcaccact tcaaactcta atttcgggtt ttgttcgttg gtgaaattca ttttagcgat
    10561 taagccatag ctttcaaatt cctcgataag ttctaaaaat gctggtctgg caactttaat
    10621 aaagaagtga cggacatctt gcttattgct tgggttgatg attttctcca agcgttgttt
    10681 ccaatcttta cccgcccaat gttggctacc ttgcgagaat tttttgttga agtattggtt
    10741 atctaccatt aatcctttcc ataagccgat acagagaatc agcataatga aggtaaatgg
    10801 taaggcgata atcagtgtca ttgtttgcag agaagccaag ccacccgaat agagtagtga
    10861 taacgctaag atggctaata atgctcccca aagcacgctt tgccatttcg gtgcattttc
    10921 ttcgccttgt gaagcaatgc tgttgagaac aaaaatcccc gagtcggcag aggtgataaa
    10981 gaaaatactg ataacaatga cggcaacgaa agaggcaata gagccaaacg gtaattgctc
    11041 aaaaaaggta aataacagtt gttcggtatt gccgctgact tcagctaaag caccggcagt
    11101 ttgttgatcg aaccaaatgg cagagctgcc gaagctggtc atccataaaa tgttaaacag
    11161 cgatggaaca aatagcaccc ctaaaataaa ttcacgaatg gttctgcctt tagagatctt
    11221 ggcaataaac aaaccaacaa atggcgccca agatgcccac catgcccaat aaaggaccgt
    11281 ccagccgctt agccagcctt gatgttccgg ttcataagcg aaggtacgga aactcatctc
    11341 aagcagcgag ctaaaataat agcctaaatt ttcggtgaag cttgagaaaa gtaatagagt
    11401 tgggccggtg attatcacaa aaataagtag caatccggct aatgtgagat tgatttcact
    11461 taagatttta acccctttgc ctacgcccga aacggcagat aacacggcaa gagccattgc
    11521 tactgttacg ataatcgcaa gaacagtaaa attgctctgt tcaattaaac ctagattgtt
    11581 aaagccagca ctgacctgca tcaccccaaa gccaagtgta gtcgttaaac cgaaaatcgt
    11641 gctacaaagg gcaataatat caattaaatg cccccagaag cctgaaatac gatgttttag
    11701 taagggataa aatccggaac gaatagtgag tgctaactta tatctgaagc caaaataagc
    11761 aagagctaag gcaatcacac cataaattgc ccaagcgtga ataccccaat gatagaacgt
    11821 tgtcatcatc gcttctttca tacgctccgg ctcagttaaa ttttgttgga cgggtttaag
    11881 gtaatgcaaa ataggttctg ctaccccaaa atacattaac ccgatcccca ttccggcggc
    11941 gaataacatc gcaatccaag agccaaaacc aaattcaggc tcatcggtat ctgcccctaa
    12001 tttaatatca cccaatcggc tgaaagagag aaaaattaga aacaggaaaa agatagagcc
    12061 tgcaaaaata tagaaccagc taaaatgttg gaagagacta tttttgatgg tatcaagtga
    12121 ggtttgtgct tgctgtggaa agatgataca gaaaacggca acaaagctga caaagagtaa
    12181 actcggtagg aaaatcggta ccctaaaggt acttcctgtg tttaattttt tgattaaatc
    12241 caatgctatt tcctctattt ttgaatggtt agaggcttga atatagcaaa aagatataaa
    12301 aataacaaat ttaagacgta ttggtaataa tattgcaacc taatgggttt ggtaaaaaaa
    12361 tcgggaaatt tgaccgcttg cacattcatt atttgcgagt agaatatttt tcatttataa
    12421 aaaacgaata aagaatgcac acacaacata acgctcaaaa aatggttttg cccattttac
    12481 tgctgatttc cctttctcat ttgttgaatg atttagttca agcagtaatg gtttcgatct
    12541 atccaatgct aaaagaaaat taccaactga gttttgctca aattggtatg atttcactca
    12601 tttatcaaat taccgcatct attattcagc cgggtattgg gctttatacc gatacccaaa
    12661 accgaattta ttgcccgtca gtatgctgat tacgcttctt tccgtgattt tacttgcctt
    12721 ttcgccgaat tttggcgtgt tactgatagc cgctgcgtta atggggatag gctctgccat
    12781 ttttcaccct gaagcctctc gggtggctcg aatggcatcg ggcggtaaat ttggtacagc
    12841 tcagtcgctt ttccaagtag gtggaaacag tggatcggcg ttaggtccgc tcttagttgc
    12901 attatttatt gtgccgttag ggcaaagtgc ggtgatttgg gttgttgcat ttgtattatt
    12961 ggcattatga tgggttttat ataaagtaag ccgttgggtg aaatatgaag ccaaaccgct
    13021 cattatttca ccaaaccata ttcaacaacg cttacacggt aaattattag ccagagcatt
    13081 attaattatc gctttattga tgttagcgaa atttatttat attgcgagcc tcagtaacta
    13141 tttcaccttt tatttaatgg aaaaattcca actcaatata gcaatggcac agctctctct
    13201 atttaccttt ttaggtgcag ttgctttagg cgcttttgtc ggcgggccga ttggcgataa
    13261 gattggacga aatgcggtga tttggttctc tttcttaggt atggcacctt ttgctttgtt
    13321 gttgcctcac gcagatctct tttggacgat tgtgtgtgcg atttttgccg gttttattat
    13381 gtcatcagcg ttctccgcta tggtggttta tgctcaagaa gccgtaccag gcagagtagg
    13441 gctgatttcc ggcacaatgt tcggtttaat gtttggtatt ggcggcttaa gtgccgccgt
    13501 attgggtttt tttgcggatg aatatggctt ggagagtatt tttaaagcct gtgcctattt
    13561 gccactactt ggttttgctg cattagggct accaaaacga aatatttaac gttttatttt
    13621 tagcgtttga caccagcttt tttcataccc aataagaaaa cccccacccc aatccaaacc
    13681 agaatgtagc ctacagcacg ttcggcggaa agtgtctcat taaaaatcag cacaccgcat
    13741 aaaaattgca gggtaggtga aatatattgc agcataccga gtagcgacat tgaaatgcgt
    13801 cttgcaccca ttgcaaacca tagcaatggt aaggtagtgg caatgccgga gcagagtagc
    13861 actgccattt gtaaaggatt gagttcactg aataccaaaa tgttttggtg gtaacaaaag
    13921 cagagatagg tgatggcaaa aggcgacatc agcaaagttt ctaacgccaa accagacaaa
    13981 ggttccattg gggcaagttt acgaatcagc ccgtaaatac agaaactggc ggctagaatc
    14041 aatgcgaccc acggaatttg tccggcagga atagcaagcc ataaaatgcc gctaattgca
    14101 aacagcagag ccaataattg ggctttattc agctgctctt ttagaataag cctaccgaca
    14161 aacacgttga aaatggggtt gataaaataa cctagactgg catctaaaat atgctcattg
    14221 acgattgccc ataagtaaac cagccagttc acgccaatca taaaagaaga aagcacgaac
    14281 agcccgagta cctttggctg tttaaaggca ttaataaccg ctcgcccttg ttggaaaatc
    14341 agcagcagaa acacagcaaa tagggcagac caaagcaccc gttgagccaa aatttgctcg
    14401 gcaggcattc ccgattggtt gatcggatac caataaatcg gaaaggttcc ccaagttaag
    14461 tagcacagta gggcatagtg ccaaccctgt aatttgcctg aaatattcat tttgctttcc
    14521 taaacgagtg tacaagcggt catatttgtc gatttttttg caaattgcaa atcacaaaac
    14581 ggcataaaaa attaggcttt ttcaatgccg aaagaaataa cctcttcaat tttttccgca
    14641 tccattgcca gcattaacag cctatcaacc ccaagggcga cacctgagca gtttggaaaa
    14701 cccgctttga gtgcggcaag aaaacgcaca tctagttgct gtggctccag ccccattttt
    14761 tcacgttgca gattatcttg ctcgaagcga tgaatttgct catcagcatc gtctaattcg
    14821 tggaagccgt tacagagttc caagcctttg tagtaaaact caaaacgttc ggcaacacgg
    14881 tgatcttccg agctaatttg agctaatgcc gcttgggtgg aagggaaatg ataaacggca
    14941 gttggtcttt cttgcccgat attggcttcg acaacctcgc tgaataaaaa ttgtaacaag
    15001 gtgtcacgct gttcatcatc atcacattgc aagccgtgtt ttcgggcttt ttccacaagt
    15061 tgtgctttgg tggcagaaag cggatctaat ccgacatagg tttggaacac aaattgatag
    15121 ctgaatgatt ctgccggttc gcagtccaaa atttgttgca gtaaatcatc cacttcattg
    15181 attaagcgat acatatcaaa atgcgggcga taccactcca gcatcgtaaa ttcagggttg
    15241 tgtcgcttac cggcttcctc gttgcgaaat actttacaca gttggaaaat cggtccactc
    15301 ccagcagcaa gtagtcgctt catatgatat tccgggctgg tcatcagatg gagtgttttc
    15361 gcctcagggg aaaaaggcga ttgaaactgc gtattgaaag tcgaaagatg aacgtctgtc
    15421 accgaaaatt cgcttaaaat cggggtttct acctctaaaa gccctcgatc ggtaaagaac
    15481 ttgcggattt ccgtaatgat ttttgaacgt tggatcaggt gaggaataga ggctgttggt
    15541 tgccaatcaa tattatcgag ttgtaaattg ttcataaaaa atgaccgctt gaaaatgtga
    15601 ggctatttta gcctaaaaaa gtgagttgcc ctagttaccg atcaagaaaa ataaa
//
LOCUS       DANMCL010000071        15631 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.071, whole genome shotgun sequence.
ACCESSION   DANMCL010000071 DANMCL010000000
VERSION     DANMCL010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 15631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15631
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.071"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            22..618
                     /gene="nfuA"
                     /locus_tag="PXF40_001931"
     CDS             22..618
                     /gene="nfuA"
                     /locus_tag="PXF40_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HDL5803245.1"
                     /translation="MEEQTIHISISDAAQAHFARLLEQQEEGTNIRIFVVNPGTPGAE
                     CGVSYCPPNAVEETDTEFKFNRFSAFVDDISLPFLDEAEIDYVTDPMGSQLTLKAPNA
                     KMRKVADDAPFIERLDYVIQTQVNPQLASHGGKVTLIEITEDKYAVLQFGGGCNGCSM
                     VDVTLKEGIEKQLLAMFPDELVGVKDITEHQHGEHSYY"
     gene            complement(786..2423)
                     /gene="pyrG"
                     /locus_tag="PXF40_001932"
     CDS             complement(786..2423)
                     /gene="pyrG"
                     /locus_tag="PXF40_001932"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HDL5803246.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLASILEARGLNVTIMKLDPY
                     INVDPGTMSPTQHGEVFVTEDGAETDLDLGHYERFIRSKMSKANNFTSGKIYSEVLRK
                     ERRGDYLGATIQVIPHITNEIKARVLEGGKGRDVAIVEVGGTVGDIESLPFLEALRQL
                     AVDIGREKTLFMHLTLVPYIPTAGEVKTKPTQHSVKELLSIGIQPDVLICRSDRAIPE
                     NEKKKIALFCNVPERAVISLKDVDSIYRIPELLKSQGLDSFVCDRFRLDCKEADLSEW
                     EQVLYCQANPTGEVTIGMVGKYVELPDAYKSVNEALKHAGLTHRLTVNIKYIDSQDIE
                     TKGTELLAGLDGILVPGGFGYRGVEGKIRTAQYARENKIPYLGICLGMQIALIEYARN
                     VAGLTEANSSEFDKDCSQPVIGLITEWQDAEGNVETRSDESDLGGTMRLGSQQCHLIE
                     GSKARELYGAETIVERHRHRYEVNNKLLPQIEAAGLKVSGLSADRKLVEIIEVPNHPW
                     FIAAQFHPEFTSTPRDGHPLFAGFVKAAKDHQESRKA"
     gene            2687..3736
                     /gene="ansB"
                     /locus_tag="PXF40_001933"
     CDS             2687..3736
                     /gene="ansB"
                     /locus_tag="PXF40_001933"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HDL5803247.1"
                     /translation="MKIKKLLLPTLLSIATMPIQAADLPNITILATGGTIAGSQKNTA
                     TSAYQAGQLNIETLIEAVPDIKKLANIKGEQIVKIGSQDMSDEVWLKLAKAINQQCPN
                     TDGFVITHGTDTMEETVYFLDMTVKCEKPVVLVGAMRPATEKSADGVLNLYNSVVVAK
                     DSKSSGRGVLVAMNDIVLGARDVTKTSTTSVQTFNSPNFGALGYIHNSKVDYERSPES
                     KHTVNTPFKVDELTELPKVGIIYAYSNMPTEPLQALLDASYQGIVVAGVGNGNMNAAN
                     LALLEEAAKKGITVVRSSRVPTGYTTRDAEIDDSKYGFIASGTLNPQKARVLLQLALT
                     QTNDIKTIQQYFEDF"
     gene            complement(3810..4454)
                     /locus_tag="PXF40_001934"
     CDS             complement(3810..4454)
                     /locus_tag="PXF40_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803248.1"
                     /translation="MRIWQKLASVIVVTLGLISNASAENFKLKYSSNYLMPAYINFNN
                     GGGQYNIQAKINVPLYNIVFSAKGTEKNEQFHMLSYRDTRNGKTYAMAEIDSKTVKYG
                     KVKEPLKEEALTMPTYDLFTTAFQLSYYDKLPSSFQTTNGKKLYPTPNVQLRKAQKEV
                     KVGGKTYQEITYKFRTSDKKDITVKKFEGEKFPRYIAYSRDGDNYELTFDSFVK"
     gene            complement(4455..5438)
                     /gene="cysB"
                     /locus_tag="PXF40_001935"
     CDS             complement(4455..5438)
                     /gene="cysB"
                     /locus_tag="PXF40_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HDL5803249.1"
                     /translation="MKLQQLRYIVEIVNQNLNITEAAEVLYTSQPGISKQVRLLESEL
                     GINIFERNGKHVKGLTPAGEKIVAIARELLVKAQSIKSVAEEQTRPNKGILRIATTNT
                     QARYMLPSVIEKFKARYPEVSLHLHQGSPNQIYDALVAGEVDLAITTEAQYLFDEAVL
                     LPCYWWNRSVIVKPEHPLAAFVNQSKNLTVEQLGRYDLITYTFGFTGQSDLDHAFNKE
                     GILPNIVFTATDADVIKTYVRLGLGVGIMASMAHTETDKDLVAINASHLFQPSMTQIA
                     FKRGTFLRNYMYDFINYFSPHLTRVQVEKAEQLRDNNAISRLFESISLEEK"
     gene            complement(5435..6118)
                     /gene="yjjG"
                     /locus_tag="PXF40_001936"
     CDS             complement(5435..6118)
                     /gene="yjjG"
                     /locus_tag="PXF40_001936"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HDL5803250.1"
                     /translation="MKYQWVLFDADETLFSFNSYLGLKAMLARYQIDFSEQDYQDFQA
                     VNKPLWVAYQNNEITAQDIQTRRFVKLSAQTGVDPLQLNQELMAEMAFVSQPLEGVMD
                     MLNALYGKVKMGIITNGFTDLQQKRLDNTQTSHFFDIVVISEQIGAAKPDRQVFDYAF
                     ALMDEFDRTKVLMVGDTLASDILGGNNAGIDTCWLNLLSKENDTDIKPTYEVHTMQQI
                     IAIVEGKSL"
     gene            complement(6194..7087)
                     /locus_tag="PXF40_001937"
     CDS             complement(6194..7087)
                     /locus_tag="PXF40_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HDL5803251.1"
                     /translation="MNKKLPPLNALKAFESAARHLNFTKAAEDLFVTQAAVSHQIKLL
                     EDFLGASLFHRRNRLLELTELGAQYFYEVQPLLEQIALATDKIRQQSSRQILTISVPQ
                     TFGMHWLVPRLADFHEKYPEVEVRIKGVDQDEGLLGKETDVAIYYGKGDWQGLESIRL
                     TESRIVILASPEYLSQNTIHLPADLAGKHLLHSSTHNKWKRMVEHLHIEDIVDAETGS
                     IFSHTFMVLQAAMHQQGIAIANQLLAQHEIEKGTLIEPFPTTLFDEKSFYVVYPSQSA
                     QVQKVQFFVEWIQQKMKECCA"
     gene            7533..8570
                     /gene="rsgA"
                     /locus_tag="PXF40_001938"
     CDS             7533..8570
                     /gene="rsgA"
                     /locus_tag="PXF40_001938"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HDL5803252.1"
                     /translation="MSKPKLTHNQQRRIQSNHHKRINKKEIEWQDEMLGEMQQGIVVT
                     RHVKHADVETAEGQIFRCNIRRTLKNVVVGDQVSWRKGSEQLQGISGVIEAVFPRKNE
                     LTRPDYYDGIKVMASNIDQIIIVSAVLPTLSLNIIDRYLVICETANIPALIVLNKIDL
                     LNESERQAVKEQLKIYEEIGYETLCLSADTGENMQALHQYLAKGTSIFVGQSGVGKSS
                     LINQLLPEVNALTGSVSDNSGLGQHTTTASRLYHLPQGGQLIDSPGIREFGLWHLEPE
                     QITLGYREFQSVLGTCKFRDCKHKTDPGCALRQEVENGEISAIRFENYHRLIESLSET
                     KSQRHFRKEEV"
     gene            8567..9166
                     /gene="rnhB"
                     /locus_tag="PXF40_001939"
     CDS             8567..9166
                     /gene="rnhB"
                     /locus_tag="PXF40_001939"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HDL5803253.1"
                     /translation="MMNEFIYPNARLIAGVDEVGRGPLVGAVVTAAVILDPNNPIQGL
                     TDSKKLSEKKRQALAEEIKAKALSWSLGRAEPTEIDELNILNATMLAMQRAVAGLHIQ
                     PDFVLIDGNRPPKLPMPAQAVVKGDSLVAEISAASIIAKVARDQEMDELDQQFPQYGF
                     AQHKGYPTKLHFEKLAEFGATPYHRKSFAPVRKVLGLID"
     gene            9179..9538
                     /locus_tag="PXF40_001940"
     CDS             9179..9538
                     /locus_tag="PXF40_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HDL5803254.1"
                     /translation="MTTEYQKTIFTKIINKEIPANIVYQDELVTAFRDIAPQAPTHIL
                     IIPNKFIPTVNHVSNEDELALGRLFTVAAKLAQEEGIAEEGYRLVMNCNKNGGQEVFH
                     IHMHLLGGQKLGPLVAK"
     gene            9541..9912
                     /locus_tag="PXF40_001941"
     CDS             9541..9912
                     /locus_tag="PXF40_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HDL5803255.1"
                     /translation="MRISYFAFAIFSIFLTACGSKPVSYLPTGSEPIVNIESDIAEKI
                     ELETNSKQFSTTNLTEFPLNLTYKLFWYNKDGVTQSHNGISDSIGWQHLWLQPKQKQT
                     IALIKPTEESHNYRLYLRGVK"
     gene            complement(9947..10576)
                     /locus_tag="PXF40_001942"
     CDS             complement(9947..10576)
                     /locus_tag="PXF40_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5803256.1"
                     /translation="MFNLQIIPVSPFQQNCTVIWDENKNAAIIDGGDNAEGIIQFVES
                     QQLKVQKLLITHGHLDHIMAVEKLREHFQVEVFGSHLADKPLFERLPEMCQQFGLPPV
                     NGFLPDHWLEEGDRVEVGELSYTVRHLPGHAPGHIGFFDFDNRIAFSGDVLFQNSIGR
                     TDLYLGNHSQLLETIREKMFDLDDDFIIIPGHGPHTTIGREKQTNPFLK"
     gene            complement(10593..11147)
                     /locus_tag="PXF40_001943"
     CDS             complement(10593..11147)
                     /locus_tag="PXF40_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HDL5803257.1"
                     /translation="MKQINVQRRKWLSLGGLVLGASLLPGQVMAALSTPAPAALRFRN
                     VNTGDTYTAKFGAGGLNKTDLSQLNYLMRDRHINQVKAIDPKLFVKLNQLQRRLGFHN
                     AEILVLSGYRSAQTNARLRRRSRGVASHSYHILGQAVDFQVSGVPLYKVKQAAESLNN
                     GGVGYYPRSNFVHVDTGPVRTWRG"
     gene            complement(11317..12822)
                     /locus_tag="PXF40_001944"
     CDS             complement(11317..12822)
                     /locus_tag="PXF40_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010129962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HDL5803258.1"
                     /translation="MVAFSGMALAETATVAQVASEPVVQDNILPQLSFAAQQARAAEL
                     VKQADYALEQEQIRQEQARKFAEAEARIKQEIGNNALLLSQATTKVYLDSEFATMWND
                     KAAEKAFLKEYALFAVSGVSSKSAKALQQILNQPEGLGRDILLTDGFLDYLYYNKNVF
                     KNANNWLYNLGSYVPKSPSSEQIFQWTNAVREGDSGQFVTDLVPRNHLYRDTAQRVLA
                     MAGGSSAPKAKKGKAVTEVAGGGNGASFYKLALNAQRLRIIPSFNNGIFVNIPSYQLY
                     YFRDGNLALQSKVIVGREDRRTPVMYSKLSNVVVNPPWNVPTSIMTKDIIPKLARDPG
                     YADRASFEILDSSGNKINPRSVNWSQYLNAKSSPYRIRQKAGDDSALGRYKFNMPSSD
                     AIYLHDTPNRGLFGKTGRALSSGCVRVEKSDELATILLKEAGWGSDKKNQVLGSKKTT
                     SAQIRSDNPVYLYYVTAWVEGGKVQTLPDIYNFDAKIPQHSVNWGKLKSII"
     gene            complement(12940..14952)
                     /gene="prc"
                     /locus_tag="PXF40_001945"
     CDS             complement(12940..14952)
                     /gene="prc"
                     /locus_tag="PXF40_001945"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HDL5803259.1"
                     /translation="MKLTRLNKIFALALGLMIGNAFAVQPDIKESAIVMPKPNEQHSL
                     STKRVTARLTQSHYHKFQLNDEFAGKIFNRYVDWLDPSHNTFLQADIDEMRSKYATTL
                     DDDLYAGKLDAAFAMYELMSKRRYERYSYALSLLDKEPDLKGNDEIEIDREKAAFPKS
                     VEEANTLWEQRVKNDIINLYLKDKKWPEIKKTLTKRYNFAIKRLTQVKADDILQTYLN
                     SFSREIDPHTSYLSPRAAKAFQESMNLSLEGIGATLTQEDDVTSIRALVPGAPAAKSK
                     KLVVGDKIVGVGQGERGEIEDVIGWRLDNVVDKIKGKKGTKVRLEIEPEKGGKTKIIT
                     LVRDKVRIEDSAAKLTVEKVDGKNVGVIKIPTFYIGLTSDVRKLLTQIEKKNVEGLII
                     DLRENGGGSLTEVIELTGLFIKDGPVVQVQDAFNRIKVHEDPESKSVYDGKVMVMINR
                     HSASASEIFAAAMQDYNRAIIVGQQTFGKGTVQQSRSLNFVYDLDQEPLGFIQYTIQK
                     FYRINGGSTQLKGVEADIKFPEIINAAKTGESFEDNALPWDKIPAANYKEAGNARNAV
                     AALTAKHQERIAKNPEFIVLNENIAIRKERDERKFLSLNLEERLKENKADESKRLKDI
                     NARFAREGKKALKDIDDLPKDYEAPDFFLKEAEQMMLDWSEFDKKS"
     gene            complement(15038..15574)
                     /gene="proQ"
                     /locus_tag="PXF40_001946"
     CDS             complement(15038..15574)
                     /gene="proQ"
                     /locus_tag="PXF40_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HDL5803260.1"
                     /translation="MSEQIEQKVEQTQNKTNPSTKEVIAYLAEKFPLCFTLEGEVKPL
                     KVGLFQELAEALKDDEKISKTLLRQVLRNYTNSWRYLAASQANVARVGLQGEEVGVVT
                     EDEATHAAEALAAAKAVVAERKAQERKAQRKEYFKQKAREENAKKRAEFKAKKAIDNL
                     PKASEEKLAALADKFGRK"
BASE COUNT         4707 a         3340 c         2805 g         4779 t
ORIGIN      
        1 ttaaaaaaca ggataattta aatggaagaa caaaccattc atatttcaat atcagatgca
       61 gcacaagccc attttgccag actattagaa cagcaagaag agggaactaa tatccgtatt
      121 tttgtggtca atcccggcac accgggggca gaatgcggtg tctcttactg cccacccaat
      181 gcagttgaag agacggatac cgaatttaaa tttaaccgtt tctctgcatt tgtcgatgat
      241 attagcttac cgtttttaga cgaagcggaa attgattatg taaccgaccc aatgggttca
      301 caacttaccc tcaaagcccc taacgccaaa atgcgtaaag tggctgatga tgcaccgttt
      361 atcgagcgtt tagattatgt gattcaaacc caagtcaatc cacaacttgc cagccacggc
      421 ggtaaagtga ccttaattga aatcaccgaa gataaatatg ccgtgctaca attcggcggt
      481 ggttgtaacg gttgctcaat ggtggatgtg accttaaaag agggaattga gaaacagctt
      541 ctggcaatgt tccctgatga attagttggt gtgaaagata ttaccgaaca ccaacacggt
      601 gaacattctt actattaaaa atactaaaag ggataaatca ttgatttatc cctttcttat
      661 aattaatgag caagcggtca aatttactcg ctttcgctcg cacttcgtgc catcagcaaa
      721 gccgatgttc aaacgcaagc gtttgtacaa aaaaatgagt aaattcgacc gcttgttaag
      781 tttgattaag ccttacgact ctcttggtga tctttcgcag ctttcacaaa acctgcaaat
      841 aatggatgac catcacgcgg agttgaggta aattccggat ggaattgtgc tgctataaac
      901 caagggtgat ttggcacttc aataatttcc actaatttac gatctgccga taaaccgctc
      961 acttttaagc ctgccgcttc aatttgtggt aacagcttat tgtttacttc gtaacggtgg
     1021 cgatgacgtt caacaatcgt ttccgcacca tataactcac gagcttttga gccttcaatt
     1081 aaatggcatt gttgtgagcc taaacgcatt gtaccaccta aatctgactc atcgctgcgg
     1141 gtttccacat tcccttccgc atcttgccat tcggtaatta agccaatcac cggctgtgag
     1201 caatctttat caaattcaga agaatttgcc tcggttaaac ctgccacatt acgggcatat
     1261 tcaattaggg cgatctgcat acctaaacag atacctaagt aaggaatctt gttttcacgg
     1321 gcatattgtg cggttcgaat tttgccttcc acgccacgat agccaaagcc gcccggcaca
     1381 agaatgccgt ctaagcctgc caataactct gtgcctttgg tttcaatatc ttgtgaatca
     1441 atgtatttaa tattcactgt taaacgatgc gttaaacctg cgtgtttcaa agcctcattc
     1501 accgatttat acgcatcagg taattccaca tattttccga ccataccgat agtcacttcg
     1561 ccggttgggt ttgcttggca gtatagcact tgttcccact ctgaaagatc ggcttctttg
     1621 caatctaaac ggaaacgatc gcacacaaag gaatctaacc cttgcgattt caataattcc
     1681 ggaatgcgat aaatcgaatc tacatcttta agcgaaataa ccgcacgctc cggcacatta
     1741 cagaaaaggg cgattttttt cttctcattt tccggaatag cacgatctga acggcaaatt
     1801 aacacatccg gctgaatacc gattgaaagc aactctttta ctgaatgctg agtcggctta
     1861 gttttcactt cccctgcggt tggaatataa ggcactaagg ttaaatgcat aaacaaggtt
     1921 ttttcacgac cgatatccac cgctaattgg cggagtgctt ctaagaatgg cagtgattca
     1981 atatccccca ccgtgccacc tacttctaca atggcgacat cacgcccttt accgccttct
     2041 aacacacggg ctttaatctc gttggtaata tgcggaataa cctgaatggt tgcacctaaa
     2101 tagtcgccac ggcgttcttt acgcaacact tcagagtaaa ttttaccgct ggtaaagttg
     2161 ttggctttgc tcatttttga acggataaaa cgctcgtagt gacctaaatc caaatcggtt
     2221 tccgcaccgt cttcggtcac aaatacctcc ccgtgctgag ttggactcat tgtacccgga
     2281 tcgacattga tataaggatc aagcttcata atggttacat ttaaaccacg agcttccaga
     2341 atagatgcta aagaggctgc cgcaataccc ttccctaaag aagatacaac accgcctgtg
     2401 acgaaaatat aattcgttgt cattgtgatt gcctttgctg attgattagg ttggaaattc
     2461 agaatatcag tttacttcgt aaaaaagaaa ctatcaggac gggaaagtag tttacatcaa
     2521 attacatttt tttgctaatg gaaaatcggc aagcagtcag attaattctt ttttcaataa
     2581 tgccgactaa tcttaattaa tacactatta tttgcgatag atcagaatta acctacatgt
     2641 ttatagatat cataatacct gtttttctaa tactggagac gatacaatga aaatcaaaaa
     2701 attactactg ccaactctgt taagcattgc tactatgcca attcaagcag ccgacctacc
     2761 taatattaca attcttgcaa ctggagggac aattgccggt agccaaaaaa atacggcaac
     2821 ctcagcttat caagctgggc agctaaatat tgaaacactc atagaagccg tcccggatat
     2881 taaaaaatta gcaaatatca aaggagaaca aatcgttaaa atcggatctc aggatatgtc
     2941 tgatgaagta tggctaaaac tggcaaaagc aattaatcaa caatgcccaa acacagatgg
     3001 cttcgttatt acgcacggca cagacactat ggaggaaacc gtatacttcc ttgatatgac
     3061 tgtaaaatgc gaaaaacccg tagtattagt gggggccatg cgaccagcaa ctgaaaaaag
     3121 tgccgacggc gtattaaatt tatataactc agttgttgtc gccaaagatt ctaaatctag
     3181 tggcagaggg gtgttggttg caatgaatga tattgtattg ggcgctcgcg atgttacaaa
     3241 aaccagtact acatcagtgc aaacatttaa ctcaccaaac tttggcgcac taggctatat
     3301 ccataatagc aaagttgatt atgagcgctc tcctgaaagt aaacacaccg taaacacccc
     3361 tttcaaagta gatgaattaa cggaattgcc aaaagtcggc attatttatg cttattcaaa
     3421 tatgccaacc gaaccgcttc aagcattatt agatgcgagt tatcaaggca tcgtggttgc
     3481 aggagttggc aatggcaata tgaatgcggc taatttggct ttacttgaag aagcagctaa
     3541 aaaaggaatt accgtggttc gctcgtctcg agtgccaacc ggatatacta cccgagatgc
     3601 agaaattgat gatagcaagt atggttttat tgcttccggc acattaaatc ctcaaaaagc
     3661 tcgagtatta ctgcagctcg ccttaacaca aacaaatgat ataaaaacta ttcaacaata
     3721 ttttgaagat ttctaaaaag taaataacaa gcggtctatt ttgcaaaaca aatcacaaaa
     3781 tagaccgctt gtctcattac taatctttat tattttacaa agctatcaaa agttagctca
     3841 taattgtcgc catcacgact ataggcgata tagcgaggga atttttcacc ttcaaatttt
     3901 ttcaccgtaa tgtctttttt atcactggtt ctaaacttgt aggtaatttc ttggtaggtt
     3961 ttgccgccta cttttacctc tttttgggct ttgcgtagct gcacattcgg tgttgggtaa
     4021 agttttttac cgttagtagt ttgaaaactg ctcggtaatt tatcgtaata gctcaactga
     4081 aaggctgtgg tgaacaaatc ataagttggc atagtcagcg cttcttcttt tagtggctct
     4141 ttcactttgc catattttac cgttttagaa tcaatttctg ccatcgcata agttttgccg
     4201 ttacgggtat ctcggtagct caacatatga aattgttcgt ttttttctgt tcccttcgca
     4261 gaaaagacaa tattatataa aggcacatta atttttgcct gaatattata ttggccacca
     4321 ccgttattaa agttaatgta ggctggcatt aaataatttg agctgtattt caacttaaaa
     4381 ttctccgcac tggcgtttga aatcaagccc aaagtgacca cgattacgct cgctaacttc
     4441 tgccaaattc tcatctattt ctcctctaaa gatatacttt cgaacaacct tgaaattgca
     4501 ttgttatctc gtaattgttc cgctttctcc acttgtaccc gtgttaaatg tggcgaaaaa
     4561 taattaataa aatcatacat atagttacga agaaaagttc ctcgtttaaa ggcgatttgc
     4621 gtcatactcg gttgaaacag gtgacttgca ttgatagcga ctaagtcttt atccgtttcc
     4681 gtatgtgcca ttgatgccat aataccaacc cctaagccta agcgtacata agttttgatt
     4741 acatcagcat ctgtcgccgt aaatacgata ttaggcaaaa taccttcctt attgaaggca
     4801 tgatctaaat ccgattgccc tgtaaaacca aaagtatagg ttatcaaatc atatctacct
     4861 aattgttcga cagtcaaatt tttactttgg ttcacaaaag ccgcaagagg atgctctggt
     4921 ttgacaataa ctgaacgatt ccaccaataa cacggcaata aaaccgcttc atcaaataaa
     4981 tattgagctt ctgtggtaat ggctaaatcc acttctccag ccaccaaagc atcataaatt
     5041 tgattcgggg agccttggtg caaatgcaaa cttacttcag gatagcgagc cttaaacttc
     5101 tcaattacac tcggtagcat ataacgggct tgggtattgg tggtcgcaat gcgtaagatg
     5161 cctttgttgg gtcgagtttg ttcttcagca accgatttaa tgctctgggc ttttaccaat
     5221 aattcacgag caatcgccac aattttttca ccagcaggcg ttagcccctt aacgtgctta
     5281 ccgttacgct caaaaatatt aattcccaac tcactttcca acaaacgaac ttgtttgcta
     5341 atccccggtt gagaagtgta aagcacctct gcggcctcgg taatattcaa gttctggttt
     5401 actatttcaa cgatataacg taactgttgt agcttcataa tgatttcccc tctacaatcg
     5461 caataatctg ttgcatcgta tgcacttcgt aagttggctt aatatccgta tcattctctt
     5521 tactaagcaa atttaaccaa caagtatcaa ttccagcatt attacctcct aaaatatcag
     5581 aagcgagggt atcgcctacc ataagcactt tagtacgatc aaattcgtcc attaatgcaa
     5641 aagcgtaatc aaacacttgg cgatcaggct ttgcggcacc aatttgttct gatatcacta
     5701 caatatcaaa aaaatgtgaa gtttgagtat tatctaaacg tttttgctgc aaatcggtaa
     5761 aaccattggt gataatgccc atttttactt taccatataa agcatttaac atatccatta
     5821 caccttctaa aggctgactg acgaatgcca tctccgccat taactcttga ttaagttgta
     5881 gcggatctac gcctgtttga gcagataatt ttacaaaacg tctggtttga atatcttgag
     5941 cagtgatctc attattttgg taagccaccc aaagtggttt atttaccgct tgaaagtctt
     6001 gataatcttg ttcactaaaa tcaatttggt aacgagccag catcgctttt aaaccaagat
     6061 aagaattaaa tgaaaacaag gtttcatcag catcaaataa tacccattga tatttcataa
     6121 tattcctttt ttaacttaga taacaagcgg tcaaattttt ctaatttttc gcataccgct
     6181 gataaagcca cgcttaagca caacactctt tcattttttg ctgaatccac tcaacaaaaa
     6241 attgtacttt ctgaacttgg gctgattgcg aaggatagac aacatagaac gatttttcat
     6301 caaacaatgt ggttgggaaa ggctctatta aagtaccttt ttcaatttcg tgctgtgcca
     6361 acaactggtt ggcaatcgca atgccttgtt ggtgcattgc agcttgaagc accataaaag
     6421 tatggctaaa aattgagcca gtttccgcat ctactatatc ttctatatgc aaatgttcaa
     6481 ccattctttt ccacttatta tgggtggagg aatgtaataa atgcttacct gctaaatccg
     6541 ccggtaaatg aatggtattt tgcgataaat actcaggcga agctaaaata acaatacggg
     6601 attccgtcaa acggatagat tccagacctt gccaatcccc cttaccataa taaatagcaa
     6661 catctgtttc tttacctaat aatccctcat cttgatcaac acccttaata cgtacttcca
     6721 cttctggata tttttcgtgg aaatccgcca aacgtgggac taaccaatgc ataccaaatg
     6781 tttgtggtac gctaatagtc agaatttgac gactactttg ctgcctaatt ttatctgttg
     6841 cgagagcaat ttgttctaat aatggctgaa cttcatagaa atattgtgcg cctaactcag
     6901 ttaattccag caaacggtta cggcgatgga acagggaagc acctaaaaaa tcttctaata
     6961 gtttaatttg gtggctcact gcagcttgtg tgacgaagag atcttctgcc gctttagtaa
     7021 aatttaaatg gcgtgcagca gattcaaatg ctttcaatgc attgagtggt ggaagttttt
     7081 tgttcataat ttttcaatct aatagattac taaacaagca actctattat tttttctgat
     7141 agtttaaata aaaaaaattc gtttgatgct tgcaaataga aataataaaa tatccgcata
     7201 cttagatgga tagtttagaa tttatttcta ttcctaaatt ttaagtatga tgttgtgttt
     7261 gcatattggt ctaggaaact agactagagt aacgaaagtt acttgtttca cttcctgtat
     7321 attttgaacc gtattggttt ataaccgccc actttgggcg gtttttttct atgtaaaaaa
     7381 acagcacaaa acctagatcg cattctatat tattcgctac ctttattcta gcctttctgc
     7441 ttttttattc tttcacttta atctattata aaaagaggtt ttatagtatg ctaaagccta
     7501 tttttcattt gcaataatta ccgagagttc ttttgagtaa accgaaatta acccataacc
     7561 aacagcgtag aatccaatct aaccatcata agcgtatcaa caaaaaagag attgaatggc
     7621 aagatgaaat gttaggagaa atgcaacagg gcatcgtcgt tactcgccac gttaaacacg
     7681 ctgatgttga aaccgcagag gggcaaattt tccgctgtaa tatccgccgt acattgaaaa
     7741 atgtagtggt gggcgatcag gtttcttggc gtaaaggtag tgagcaacta caagggatta
     7801 gtggggtcat tgaagccgtc ttcccacgta aaaatgaact tacccgcccc gattattatg
     7861 acggtattaa ggtgatggca tcgaacatcg atcaaatcat tattgtatca gctgtgctac
     7921 ctacactttc gctgaatatt atcgaccgtt atttagtgat ttgcgaaacg gcgaatattc
     7981 ctgccttaat cgtgctaaac aaaattgatt tattaaacga aagcgaacgg caagcagtta
     8041 aagagcagct caaaatctat gaagagattg gctatgaaac cctatgttta tcggctgata
     8101 cgggtgaaaa tatgcaggcg ttacaccaat atcttgctaa aggtacgtct atttttgtcg
     8161 gacaatccgg cgtggggaaa tccagcctaa ttaaccaact gttacctgaa gtcaatgctc
     8221 tcactggctc agtgagcgat aactcagggt taggtcagca caccaccact gcctctcgct
     8281 tataccattt accgcaaggc ggacagctga ttgactcgcc gggcattcga gaatttggct
     8341 tatggcattt agaacctgag caaatcacct taggctatcg agaatttcaa tcggttttag
     8401 gcacgtgcaa attccgtgat tgcaaacaca aaaccgaccc gggttgtgcc ttaagacaag
     8461 aggtcgaaaa tggcgaaatt tctgcaattc ggtttgaaaa ttaccatcgc ttaattgaaa
     8521 gcctgtctga aaccaaaagc caacgccatt tcagaaaaga agaagtataa tgaatgaatt
     8581 tatttaccct aacgcccgat taatcgccgg tgttgacgaa gtcggacgag gacctttagt
     8641 cggagcggtt gtgaccgcag ccgtgatttt agatccgaat aacccgattc agggcttaac
     8701 cgattccaaa aaattatccg agaaaaaacg ccaagctttg gcagaagaga ttaaagccaa
     8761 ggctctgagc tggtcgctag gacgtgccga gccgacagaa attgatgagc tgaatatttt
     8821 aaatgcgaca atgttggcaa tgcaacgtgc ggttgccggc ttgcatattc agccggattt
     8881 tgtgctaatt gacggcaatc gtccgccaaa actgccaatg ccggcacaag cggtggtgaa
     8941 aggagacagc ttagtggctg aaatcagtgc tgcttcgatt attgccaaag tcgcccgaga
     9001 tcaagaaatg gacgaattag accaacaatt tccgcaatac ggcttcgcac agcacaaagg
     9061 ctacccgact aaactccatt ttgaaaaatt agcagaattt ggggcaacac cttatcatcg
     9121 taagagtttt gcccctgtaa gaaaagtatt aggtttaatc gattagaagg aaaacacaat
     9181 gactacagag taccaaaaaa cgattttcac caaaatcatc aataaagaaa ttccggcaaa
     9241 tattgtctat caagatgaac ttgtgaccgc atttcgtgat attgctccac aagcacccac
     9301 gcatattttg attattccga ataaatttat tccaaccgtc aatcacgtga gtaatgaaga
     9361 tgaattagcc ctagggcgtt tatttacggt ggcggcaaaa ttagcccaag aagaaggcat
     9421 tgccgaagaa ggctatcgct tagtgatgaa ttgtaataaa aacggcgggc aggaagtgtt
     9481 ccatattcat atgcacttgt taggcggaca aaaactagga cctttagtgg caaaataact
     9541 atgcgtattt cctactttgc atttgcaatt ttttcgattt ttttgaccgc ttgtggtagc
     9601 aaacctgtca gctatttacc aaccggctca gagcctattg tcaatattga gtctgacatt
     9661 gctgaaaaga tagagctgga aacgaatagc aagcaattta gcaccacaaa tttaactgaa
     9721 tttccgctta atcttactta taaattattt tggtataata aagatggggt aacacaatcc
     9781 cataacggta tatcagatag tatcggctgg caacatctat ggttgcaacc taagcaaaaa
     9841 cagaccattg cactcattaa accgacggaa gaaagccata attaccgcct ctatttacga
     9901 ggcgtaaaat agcaaaaaag cagagccaac tgctctgctt ctttatttat ttcaaaaacg
     9961 ggttggtctg tttttcccgc ccgatagttg tgtgtggacc atgtcccggt atgatgatga
    10021 aatcatcatc taaatcaaac attttttccc tgatcgtttc caataactgg ctatggttgc
    10081 ctaaatagag atctgttcga cctatgctat tttggaataa aacatcgcca ctaaaagcaa
    10141 tacgattgtc aaaatcaaaa aaaccgatat gacccggagc atgacccggc aaatgtcgaa
    10201 cggtatagct cagctcgccg acttcgaccc gatcaccttc ctccaaccaa tgatccggca
    10261 aaaagccatt tactggtggt aatccaaatt gttggcacat ttccggcaaa cgttcaaata
    10321 aaggtttatc tgcaagatgc gagccgaaaa cctctacttg aaaatgctct ctcaactttt
    10381 ccaccgccat aatatgatct aaatgaccgt gcgtaatcaa taatttctga accttaagct
    10441 gctgagattc aacaaattga ataatgcctt cggcattatc gccgccatca ataatagccg
    10501 cattcttatt ttcgtcccaa atcaccgtgc aattttgttg aaatggacta acaggaataa
    10561 tttgcaaatt aaacataaaa taagaccgct tgttagcctc tccaagtgcg aactgggcca
    10621 gtatctacgt gaacaaagtt actacgagga taataaccta cgccaccatt attcaagctc
    10681 tcagccgctt gttttacttt atataacggc acacctgata cttggaaatc tactgcttgc
    10741 ccaagaatat ggtaactatg gctggcaaca ccacggcttc tacgacgaag tcttgcattt
    10801 gtttgtgcgg agcgatagcc acttaatact aggatttccg cattatggaa acctaaacgg
    10861 cgttgtaatt gattcaattt gacaaataat tttggatcaa ttgctttaac ttgattgata
    10921 tgacgatccc gcattaaata gtttaactgg cttaaatcgg ttttatttaa tccacctgca
    10981 ccaaatttag cagtgtaagt atcgcctgta ttcacattac gaaaacgtaa cgcagctggg
    11041 gcaggagtag aaagcgctgc cattacttga cccggcagaa ggctagcccc taaaacaagt
    11101 ccgccgagtg atagccactt acggcgttga acattaattt gtttcatttt ttcctcatag
    11161 gttagctaat gatttataga aaatcactca caaatgagcg aatttctata caccatactt
    11221 aaagtaaaaa tttacaatcg taaatttatg taagctatat tttcaaaaag ttccaagaag
    11281 atgatatctt cttggaattt atcagaaata gcacgattaa ataatgctct ttaattttcc
    11341 ccaattcaca gaatgttgtg ggattttggc atcaaagtta taaatgtccg gaagggtttg
    11401 cacttttcca ccttcaaccc aagccgtcac ataatagaga taaaccgggt tatctgaacg
    11461 aatctgagcc gaggtcgtct tcttactgcc taagacttga ttctttttat cagatcccca
    11521 acccgcttct tttaataaaa tggttgccaa ttcatcagat ttttctacac ggacacaacc
    11581 agaacttaac gcacgccccg ttttaccaaa taatcctcta tttggcgtat catgcaaata
    11641 aattgcatcc gaacttggca tattaaattt ataacgtcct aaagcgctat catcacctgc
    11701 tttctggcga atacggtatg gtgaactttt agcatttaaa tattgtgacc aatttacgct
    11761 acgcggatta attttattgc cactactatc aagaatttcg aaactagcac gatctgcata
    11821 acctgggtca cgcgctagtt taggaataat atctttagtc ataatactag tcggtacatt
    11881 ccaaggtgga ttcactacca cattgctcag cttactatac attaccggtg tacggcgatc
    11941 ttctcgccca acaatcactt tagattgaag agctaaatta ccatcacgga aataatataa
    12001 ttgatagctt gggatattca caaaaattcc attgttaaaa cttggaataa tacgtaaacg
    12061 ttgagcattg agcgctaatt tatagaaaga agccccatta ccgccaccag ctacctccgt
    12121 aacagcttta ccttttttgg ctttaggtgc tgaagagcct cctgccattg ccaatactct
    12181 ctgtgccgta tcacgatata aatggtttct tggaacaagg tctgttacaa actgcccaga
    12241 atcgccttcc ctcacggcat tagtccattg gaagatttgc tctgaagagg gcgattttgg
    12301 tacataactg cctaagttat ataaccaatt atttgcattt ttaaacacat ttttgttgta
    12361 atacaaataa tctaagaagc catcagttaa taaaatatct ctacctaaac cttccggttg
    12421 atttaagatt tgctgcaatg ccttagctga tttagaggat accccactta ctgcaaataa
    12481 tgcatattct ttcaaaaatg ctttttctgc ggctttatca ttccacattg tcgcaaattc
    12541 actgtctaaa taaaccttag ttgttgcttg gctcagcaat aaggcattat tacctatttc
    12601 ttgcttaatt cttgcttccg cttctgcaaa ttttcttgct tgctcttgac gaatttgttc
    12661 ctgttctaac gcataatcgg cctgttttac caattctgca gcacgagcct gctgagctgc
    12721 aaaacttaat tgtggtaaaa tattatcttg tacaacaggc tcagaagcca cctgagcaac
    12781 tgtggctgtt tcagccaaag ccatgccaga aaacgccacc ataataggta ataatttaaa
    12841 ggttttcacc cactcttcct cttaatattt gcaaatttat aaaaaaataa accgcttagc
    12901 ggagctaagc ggtacgttat gtgcgcatta taaacacatt tatgattttt tatcaaattc
    12961 tgaccaatca agcatcatct gttcagcttc ttttaagaaa aagtccggtg cttcatagtc
    13021 ttttggtaaa tcatcaatat cttttaatgc ttttttgcct tcacgggcaa aacgagcatt
    13081 aatatctttt aagcgcttgc tttcatctgc tttattttct ttcaggcgtt cttctaaatt
    13141 taacgataaa aacttacgct catcacgttc ttttcgaatc gcaatattct cgtttaatac
    13201 tataaactct gggtttttag caatacgctc ttgatgtttc gctgttaatg cagcaaccgc
    13261 gttacgagca ttcccagcct ctttataatt agctgctgga attttatccc aaggaagcgc
    13321 attatcttca aaactttcac ctgtttttgc agcattaatg atttccggga atttaatatc
    13381 cgcctcaacc ccttttagct gggtacttcc accattgata cggtagaatt tttgaatcgt
    13441 atattggata aaaccaagag gctcttgatc caaatcatat acaaaattca atgaacggct
    13501 ctgttgaaca gttcccttac caaaggtttg ttgccctaca ataattgcac ggttgtaatc
    13561 ttgcattgcc gcagcgaaga tttcagaggc tgaagcacta tggcgattaa tcatcaccat
    13621 cacttttcca tcataaactg attttgattc tggatcttcg tgtactttga tacgattgaa
    13681 tgcgtcttgt acttgcacta caggcccatc tttaataaat aaaccagtta attcaatcac
    13741 ttcagttaac gaaccaccac cgttttcacg taaatcaatg atcaatcctt caacattttt
    13801 tttctctatt tgagtaagta atttacgtac atctgaagtc aaaccgatat aaaaagtagg
    13861 gatcttaatt acccctacat tttttccatc tactttttct accgttaatt tagcagcact
    13921 atcctcaata cgaactttat cacgcacaag ggtaataatt ttagtttttc cacctttttc
    13981 aggctcaatt tctaaacgaa ctttagtgcc ttttttacct ttgattttat cgactacatt
    14041 atccaaacgc caaccgataa catcttcaat ctcacctctc tcaccttgac ctacaccgac
    14101 aattttatcg ccgactacca gcttcttact tttagcggca ggggctcctg gcactaatgc
    14161 tctaatgctg gttacatcat cttcttgggt tagcgttgca ccaattcctt ctagcgacag
    14221 attcatgctc tcttggaacg cttttgccgc acgaggagac aaatagctag tgtggggatc
    14281 gatctcacga gagaatgaat ttaagtaagt ttgtaaaata tcatcagcct taacttgagt
    14341 taaacgctta atcgcaaagt tataacgttt agtgagtgtt ttcttaattt caggccattt
    14401 tttatcttta agatataaat tgataatatc gtttttaact cgctgctccc aaagtgtatt
    14461 tgcctcttct acactttttg gaaatgcggc cttctcacgg tcaatctcaa tttcatcatt
    14521 cccttttaag tcaggctctt tatctagtaa agataaggca tagctataac gctcataacg
    14581 acgtttagac attaactcat acattgcaaa tgctgcatct aatttaccag catataaatc
    14641 atcatctaat gttgtagcat atttactacg catttcatca atatcggctt gaagaaaagt
    14701 attatgagaa ggatcaagcc aatcgacata gcggttaaaa atcttccctg caaactcatc
    14761 attcagttga aatttatgat aatgcgattg agttaatcgg gctgttacac gcttggttga
    14821 taagctatgc tgctcattag gttttggcat cacaatcgca ctttctttaa tgtccggctg
    14881 aacggcaaaa gcgtttccta tcattaaacc tagggctagg gcaaaaattt tatttaatct
    14941 tgttaatttc atcttctttt ccaaataatc aagcggtcat ttttttgcaa aattttacta
    15001 aaatccgacc gcttgtaagc acaaagcgac ttgaaaacta tttacgaccg aatttatctg
    15061 ctaatgcagc taatttttct tctgaagctt taggtaaatt atctattgct tttttcgcct
    15121 taaattctgc acgctttttc gcattttctt cacgtgcttt ctgtttgaag tactctttac
    15181 gttgtgcttt acgctcttgt gctttacgtt ctgcaaccac cgctttcgca gcagccaaag
    15241 cttctgcggc gtgagtagct tcgtcttctg ttaccacgcc aacttcttca ccctgtaagc
    15301 cgacacgagc aacattagct tggctggcag ccaagtaacg ccaagaatta gtgtaattcc
    15361 gcaatacttg gcgcaataac gttttactga ttttctcatc atcttttaat gcttcagcta
    15421 attcctgaaa caacccaact ttcaatggtt ttacttcacc ttcaagcgtg aaacaaagcg
    15481 gaaatttctc cgctaaataa gcaatcactt ccttggtact tggattggtt ttattctgag
    15541 tttgttctac tttttgctca atttgctctg acataataag tcctatttaa taaaaatcta
    15601 ataattagat aagtgaaaat ctaactggat a
//
LOCUS       DANMCL010000072        14882 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.072, whole genome shotgun sequence.
ACCESSION   DANMCL010000072 DANMCL010000000
VERSION     DANMCL010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14882
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.072"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..588
                     /locus_tag="PXF40_001947"
     CDS             <1..588
                     /locus_tag="PXF40_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5803261.1"
                     /translation="GDYLESSDAQIFRDKYQELEFKPNPDFNGPYYGLDFGFANDPTA
                     CVKCWVFDDDLYIEREAGKVRLELDETAAYLANALPDLSNYTVRADSARPESISYLKR
                     HGLPYIQPVPKWKGSVEDGVEHIKSYRKVYIHPSCTEVLKEFRLYSYKTDRLSGDVLP
                     IIIDAHNHYIDAIRYALNPLIQARGEAKQCALKVY"
     gene            601..2004
                     /locus_tag="PXF40_001948"
     CDS             601..2004
                     /locus_tag="PXF40_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4055 domain-containing protein"
                     /protein_id="HDL5803262.1"
                     /translation="MPNSISADFAALKAKTKIIDDLLGGTQKMRQAGQTYLYKMKMEE
                     EDGYKNRLNRSTLYPALRETLSQMLGRVFFNPINVEDVHKQIEPLFDDIDLEGNNLDV
                     FASRWFYAALAYGVSYCLVDFVRVENARSLAEEKAQNARPYLVHIKPQQVLGFKTAKI
                     NGKTAFTQFRYKETVTEDDGEFASKQVNYIYVYEIGRVRKYKNDEGGLSLVADMQIKA
                     QNTPLAFVPIVPFITKPIDVWGMGEPPLMELAYLNIKHWQSQSDQDNILNIARVPLLA
                     IFSDTQIKSLEIGSSAISLPKDSTMQFIEHSGSSINAGLTSLKELEDQMKTAGAKLLT
                     KTALAMTDSQAKDEAGKEISQLRHYANKFEDALDLAFEYIGHWLGIGVDEVGTSQISG
                     NIDNDLDPNASMATIIQLRNAGVISNHSTFEEAKRRGLLSDSAKWEDEQARLQAEGLS
                     DDFTNPFNSNQSENAAS"
     gene            1952..3613
                     /locus_tag="PXF40_001949"
     CDS             1952..3613
                     /locus_tag="PXF40_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5803263.1"
                     /translation="MTLQIHSIRTKVKTPLAKRIAHALTDRKILQFRFDAHLRNQVWQ
                     RLTKTQKALLNRINAAGIDALPKRELDKLLKELKAEIAKNYQETTAYIQPELSGFFAV
                     EKQALTELYNDEIGYDFFNQVPSYQRKATQQATIIAGMPLESWFEKQGSELSFKFEST
                     IRQGLLEGRQTPEIAKATAELFGISRRHADTLVITAVAKVADDAHKALRDENLDLIKG
                     EMHLSTLDTRTSTVCQVRDGKMWDTDYKPIGHSLPYQRPPLHPRCRSILQLVMKDWKE
                     LGFDDVKEMPKSTRASADGQVSEKTNYEEWLSSKTPEEQDKALGKGKADLWRRGVITF
                     SDMLDQSARPLTLKELYSLKNSSSVDKMDSVELVRKKAVAVEPMITRDVVSIITASGG
                     EPAGLDFRLKSLSSLQRKIDTEIMAGVSKEQAIASIRDVIRYTAILDEQRFVEQYQKM
                     QKDLEKQGYSTIIVKNTWKSNNAYKGINTFVSTFIEKNNIIFELQYHTKQSFELKNGK
                     LHELYEKFRDLNIPLAKKSEILLEMQKLSANLKEPKNIDLIKEKK"
     gene            3613..3831
                     /locus_tag="PXF40_001950"
     CDS             3613..3831
                     /locus_tag="PXF40_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803264.1"
                     /translation="MYQYYLAQVGNEQQKLIRGMPDNLLSFSVYEPEQEDWDNKFGPF
                     WADKILISGFDAYEEISEKEAIRFIKVH"
     gene            3832..4245
                     /locus_tag="PXF40_001951"
     CDS             3832..4245
                     /locus_tag="PXF40_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HDL5803265.1"
                     /translation="MCQAEQFARQLHYGQTDKAGKPYIEHLAFVAENISTKNEETEAV
                     AWLHDSVEDTQCSINDIRHIFGDVIADAVEAITKKQGESYFCYLDRVKSNPIAKVVKL
                     ADLTHNLCLERLPKITEKDLKRAEKYKSALEYLQA"
     gene            4363..5097
                     /locus_tag="PXF40_001952"
     CDS             4363..5097
                     /locus_tag="PXF40_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803266.1"
                     /translation="MKLKLDENGHVVVENGMPVYIHDDGKEIPFDALKATQKITQLNA
                     EAKQHREAKEKAEADLKAFSGIDDPKAALEALKTVANLDAKKLIDAGDAEKVKAEIIK
                     GYDEKLAVATAQAEKLQQQLHAELIGGSFARSKYAQEHLNIPSDVVQAFFGKHFSISD
                     DGKVVAKFADGGEIFSRTRPGEKADFEEALEALVSAYPNKDAILKPSGSSGAGAGGGS
                     RSSSMPKTLSDCKTDEERIAYLQANS"
     gene            5163..6110
                     /locus_tag="PXF40_001953"
     CDS             5163..6110
                     /locus_tag="PXF40_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005643804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803267.1"
                     /translation="MAFDLQVFNKQTQLALTETVDQAIEKFNAASGGAIILQNKPAEG
                     DFDIRASFKGIAGLVRRRNVYGTGTVDAKRLEQLLDVAVKVAAGTAPIEYQPSQYKWI
                     LLNPELAAIEIGTQLAKARVADMLNTAIAGTVAAISGNTAMTLDEKTAAPTFRILNKG
                     AAKMGDRAGSLKAWVLHSTTLHGLYDNALTNAENLFKYENVNVIRDPFGRVFVVTDSP
                     ALMASDGTFNTLGLVENAVVVSGNNDFDSVLVPKTGGENLSAVYQAEWTYNLGILGYK
                     WDMTAGGKSPNDTALGTPTNWDKSVTSNKDTAGVLVKTK"
     gene            6170..6520
                     /locus_tag="PXF40_001954"
     CDS             6170..6520
                     /locus_tag="PXF40_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803268.1"
                     /translation="MKRILYFTTDFSAKNIAFAKAHGVLMRNLNAYHPSDTLENADAV
                     CGNVPQAYQHLPLFELPESNQKSGQDLKTLKTEEIKEKLTELGIAFEANAKKETLLTL
                     LTQAVGRDGTNDAK"
     gene            6510..6947
                     /locus_tag="PXF40_001955"
     CDS             6510..6947
                     /locus_tag="PXF40_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803269.1"
                     /translation="MLNSYMTVEQANAYHDIRMSREAWNALSDQEKQQRLVSASDFLD
                     FNYRFSGEKADLTQEREFPRKGFEAIGIPKAVQFAVCELALQDNLTANQEAQMSSVRV
                     GPVSVNYDNSSPQNSVNRFEYVRQLLSTWLDRSSFGTVKLERS"
     gene            6947..7318
                     /locus_tag="PXF40_001956"
     CDS             6947..7318
                     /locus_tag="PXF40_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803270.1"
                     /translation="MADFYGNLGKISHSLIKQFGQPCSVTINEQGRYNPATGERKKGS
                     STVHAGYCLFDNLAFDFRNQQSVSVQQGDVMIYLTADCKPVLNAVIEANGEKWSVINV
                     QPIRPAATTMIYQVQGRKADG"
     gene            7311..7724
                     /locus_tag="PXF40_001957"
     CDS             7311..7724
                     /locus_tag="PXF40_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5803271.1"
                     /translation="MGSFHAQIARFVEQTQQKADRALRVIALQTLSGVQKKSPVDTGQ
                     LRRSWTVALNGFPSSYNGSQTVLNSAKFGDMIVIATNKPYAPMLEYGLYPNPPKKPTG
                     KTKNGYSIQAPNGMVRITVQEMQAFIRNNPQLGVS"
     gene            7724..8116
                     /locus_tag="PXF40_001958"
     CDS             7724..8116
                     /locus_tag="PXF40_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803272.1"
                     /translation="MRPIIRSVLEQHLAELNPFNTVWEGIIDSPKLPYQTVSMTTSTN
                     ETATIGNTPKAKQSGFLQVTLYYPLDQGTKAIEERADEIFRHFFGQVWIEENVQILVQ
                     QPPLVASLYRLDNSIALPITIYFTAYEL"
     gene            8126..9148
                     /locus_tag="PXF40_001959"
     CDS             8126..9148
                     /locus_tag="PXF40_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803273.1"
                     /translation="MSILGNSQGTKRTVVFAKESSFGTKAAPTGAKIMPRVETSLNTN
                     FESYQSEEIRDDLQRSASVIGFEKVEGDIKGELAAGQWAAFFAAALRGSFTAQAKKPI
                     ITKTTDGTGEKNGKILIVPKTSHTSDSFTLEDVFKDINVSRQYLGCRVSKLSLDVQPN
                     GIASITVSFLGQRGEESTTAYFTNPTDLTQSGKLAGVKGSLQVNKRPVGLVTAFKLDI
                     DLGASSEPVLGAKYAPDVFIGTVAVSGSFTMYFQDKTMIDAVRNGTDLSLALRMDAEE
                     RTNTDYLTIILPGVKVTSNELDDGAKNIMQTLNFDAFPAVWDSASQIDNVLKVATTMI
                     VQDSLA"
     gene            9238..9639
                     /locus_tag="PXF40_001960"
     CDS             9238..9639
                     /locus_tag="PXF40_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803274.1"
                     /translation="MNLNALSKEKQLAEHRFELVHPVSGEPLGVFMSVVSAKSDKAQR
                     FAEKQLRQEQMRELENAKSRKPKFKGLGDMIAESRAMAIDRLTGWENVEWNEKPLEFS
                     DQNAELLLTECDWIVEQIFEHSNDLGKFLKS"
     gene            9654..9980
                     /locus_tag="PXF40_001961"
     CDS             9654..9980
                     /locus_tag="PXF40_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803275.1"
                     /translation="MYAEKTFKLDKKLKGSESTLREHLQAIEMQTGITPEELHNPEPS
                     PAVAYLLGWFFELAMSRQSGMSLNPISYTEIDAWSRLFARHLEQWEISVIKQLDMIYL
                     NVQQTE"
     gene            9982..10305
                     /locus_tag="PXF40_001962"
     CDS             9982..10305
                     /locus_tag="PXF40_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005714385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803276.1"
                     /translation="MDTFNFQPNWGLNVQRKPEVMKIAFGDGYEQVAPKGLNHNLRTY
                     SAVFTGTEARIKQIEAFFERQGGYKAFLWTPYGGKEGKFRCEEWEVSISSGKWTLSAT
                     IREVL"
     gene            10392..11084
                     /locus_tag="PXF40_001963"
     CDS             10392..11084
                     /locus_tag="PXF40_001963"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803277.1"
                     /translation="MKKIFVSALLLTCSLSALGNSSYELIIDSMQDLEKHKPEILSIP
                     EADRNTFIRYMMRKELRIKLNQGRLADGLTVREAIQNQQAFEKDRNSKMQQEKQKKET
                     EKAEKEKAVTDFNQKFELSITGARKAKNALNQDILLVSLSLKNNSDKPIIAVQPDIQF
                     VLGEDKQTISSMRPKKFENGIPPNGSEIFEFGFDLDDMFALKAEKNIEKLRAVFQTAE
                     VLFADGTTEKLQ"
     gene            11148..11972
                     /locus_tag="PXF40_001964"
                     /pseudo
     CDS             11148..11972
                     /locus_tag="PXF40_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015691083.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
     gene            14016..14174
                     /locus_tag="PXF40_001965"
                     /pseudo
     CDS             14016..14174
                     /locus_tag="PXF40_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            14182..>14882
                     /locus_tag="PXF40_001966"
     CDS             14182..>14882
                     /locus_tag="PXF40_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5803278.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRNLKDKSGNAGRVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEASGFERNSSGPSNRPTLTLSNLFGLITSIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLTSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKSTSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSV"
BASE COUNT         4710 a         2866 c         3463 g         3843 t
ORIGIN      
        1 ggggactact tagaatcctc tgatgctcaa atctttagag ataaatacca agaattagaa
       61 tttaagccta accctgattt taacggtcct tattacgggc tggactttgg ttttgccaat
      121 gacccaacag cctgtgtgaa atgttgggtg ttcgatgatg acttatatat cgagcgtgaa
      181 gcagggaaag taagactaga gctcgatgag accgctgctt atttagcaaa tgctttgcct
      241 gatttgagta attatactgt tagagcagat tctgctcgcc cagaatccat cagttattta
      301 aaacgacatg gattgcctta tattcaacct gttccaaagt ggaaaggctc agtcgaagat
      361 ggggttgagc atataaaatc ttatcgtaaa gtatatattc atccaagttg tacagaggta
      421 ttgaaagaat ttcgccttta tagttacaaa acggacagat taagtggtga tgtactgcct
      481 atcattattg acgctcataa ccactatatt gatgccattc gttatgcctt aaatcctctt
      541 attcaggcaa gaggcgaggc gaagcaatgt gcattaaagg tttattaaaa tgaggtaaca
      601 atgcctaact ccatctcagc cgattttgcg gcattaaaag caaaaacaaa aatcatcgat
      661 gatttactcg gtggcacaca aaaaatgcga caagcgggtc aaacctacct ctataaaatg
      721 aaaatggaag aggaagatgg atataaaaac cgattaaatc gttctacgct ttatccggca
      781 ttgagggaaa cgctttcgca gatgttgggg agagtgtttt ttaatccgat caacgtagag
      841 gatgtgcata aacaaatcga accattgttt gatgatattg atttagaggg taacaatctt
      901 gatgtattcg cttctcgttg gttttatgct gcattggctt atggcgtatc ttattgcttg
      961 gtggattttg tgagggtaga gaatgcccgc agtcttgcag aagaaaaagc tcaaaatgca
     1021 cgtccgtatt tggtgcatat taagccgcaa caagtgctgg gctttaaaac agccaaaatc
     1081 aacggtaaaa ctgcttttac ccaatttcgt tataaagaga cagttacaga agatgatggc
     1141 gagtttgctt ctaaacaggt gaactacatt tatgtttatg aaatcggacg tgtccgaaaa
     1201 tataagaacg atgagggtgg cttatcactg gttgctgata tgcaaatcaa agctcaaaat
     1261 acaccgcttg catttgtgcc tattgttcca tttatcacta aaccgattga tgtttgggga
     1321 atgggtgagc cgcctttaat ggagctggct tatttaaata ttaagcactg gcaaagtcag
     1381 tcagatcaag acaatatttt gaatattgct cgtgtaccgc tattagctat tttctctgat
     1441 actcaaataa aatcccttga aatcggctca agtgcaatat ctctgccgaa agacagtaca
     1501 atgcagttta ttgagcattc aggttcgtct attaatgccg gtttaaccag tctgaaagaa
     1561 ctagaagacc aaatgaaaac tgccggtgcg aaactgctaa ctaaaacagc attagcaatg
     1621 acggatagtc aggctaaaga tgaagcaggt aaagagatct cacagcttag acattatgct
     1681 aacaaatttg aagatgctct cgatttggct tttgagtaca ttgggcattg gctaggtatc
     1741 ggcgttgatg aagttgggac ttcgcaaatt tcaggcaata tcgacaatga tttagatcca
     1801 aatgcgtcaa tggcaaccat tattcagcta cgcaatgccg gtgtcatttc aaatcactct
     1861 acgtttgaag aagctaaaag acgaggttta ttgtcagata gtgcaaaatg ggaagacgaa
     1921 caagcaaggt tacaagcgga aggtttaagc gatgacttta caaatccatt caattcgaac
     1981 caaagtgaaa acgccgctag ctaaacggat cgctcacgca ttaacagatc gtaaaatatt
     2041 gcagttccgt tttgatgctc atttacgaaa tcaagtttgg caacgactca caaaaacgca
     2101 aaaggcatta ttaaaccgaa ttaatgcagc cgggatagat gccttaccga aaagagagtt
     2161 ggataaactg ctcaaagaac tcaaagcaga aattgcaaaa aattaccaag aaacgaccgc
     2221 ttacattcag cctgaattaa gcggtttttt tgcggttgaa aaacaggcac tgactgagct
     2281 ttacaatgat gaaatcggct atgatttttt caatcaagtg ccgtcatatc aacgtaaagc
     2341 tacgcaacaa gcgactatta ttgccggaat gccgcttgaa agttggtttg aaaagcaagg
     2401 atcagagctt tcgtttaaat ttgaaagcac cattcggcaa ggcttgttag agggtaggca
     2461 aacgcctgag attgccaaag ctacggctga attatttggt atatccagac ggcacgctga
     2521 tacacttgtc attactgctg tggcaaaagt ggcggacgat gctcacaagg cattgcgaga
     2581 tgaaaatctt gatttaatta agggtgagat gcacttatca acgctcgata cccgcaccag
     2641 tactgtttgt caagtgcgag acggtaagat gtgggacact gattacaagc ctatcggaca
     2701 cagtttgccg tatcaacgcc caccacttca ccctcgctgt cgttcgattc tgcaactggt
     2761 gatgaaagac tggaaagagt taggctttga tgatgtgaaa gaaatgccga aaagcactag
     2821 ggcgagtgca gacgggcaag tgtcggagaa gacaaactat gaagagtggc tcagtagcaa
     2881 aacaccggaa gagcaagata aagcgctagg caaaggcaag gcggatttgt ggcggcgggg
     2941 agtgataacg tttagcgata tgttagatca aagtgctaga ccattgacac taaaagagct
     3001 atattcatta aaaaatagtt cttcggtaga taaaatggat agtgtggaac ttgtccgtaa
     3061 aaaggctgtt gcagttgagc ctatgattac tcgtgatgta gtatcaatta ttacagcatc
     3121 tgggggcgag cctgccggct tagattttcg cttgaaatca ctatcatctt tgcagcgaaa
     3181 aattgatacg gaaataatgg ccggagtgtc aaaagagcaa gcgatagcaa gtattcgaga
     3241 tgttattcgc tacactgcaa tcttagatga acagcgtttt gttgagcaat accaaaaaat
     3301 gcaaaaagac ttggagaaac aaggttattc tacgatcatt gttaaaaaca cttggaaatc
     3361 aaataatgct tataagggca ttaatacgtt tgtgagcact tttattgaaa agaataatat
     3421 aatttttgaa ttgcaatatc atacaaaaca aagttttgag ttgaaaaacg gtaaattgca
     3481 cgagctctat gaaaaattca gagatctgaa tatacctctt gcaaaaaaat cagaaatttt
     3541 acttgaaatg cagaagttaa gtgctaatct aaaagagcca aagaacattg atttaatcaa
     3601 ggagaaaaaa taatgtatca gtattattta gctcaagttg gcaatgaaca gcaaaaactt
     3661 attcgtggta tgcctgacaa tctacttagt ttctcggttt atgagcctga acaagaagat
     3721 tgggataata agttcggccc attttgggca gacaagatct tgataagcgg atttgacgct
     3781 tacgaggaaa tttcagaaaa ggaagcaatc cgatttatca aggtacatta aatgtgtcaa
     3841 gctgaacaat tcgctcgcca actgcattat ggacaaacag ataaagctgg aaagccatac
     3901 attgagcatc ttgcttttgt tgcagaaaac attagcacaa aaaatgaaga gacagaagca
     3961 gtagcttggt tgcacgacag tgtagaagat actcagtgtt caattaatga tattcgtcat
     4021 atatttggcg atgttattgc tgatgcagtt gaggctatta ctaaaaagca aggcgaaagt
     4081 tatttttgct acttggatag agtaaaatca aatcctattg ctaaggtggt taagttagct
     4141 gatttgactc ataatctttg ccttgagcga ttgcccaaga tcactgaaaa ggatcttaaa
     4201 cgagcagaaa aatacaaatc agcattggaa tatctacaag cctagcctaa aacgctaggc
     4261 ttttttatcg caatttttta ccccaaactg accgtttgtg agccatcaca ggcggttttt
     4321 tattatcggg cggaagccca ccagcaatga gaggaagctc aaatgaaatt aaaattagac
     4381 gaaaacggac atgtagtagt tgaaaatggt atgcctgtgt atattcacga tgacggaaag
     4441 gaaattccgt tcgatgcact aaaggcgaca cagaaaatca cacaactgaa cgctgaggca
     4501 aagcaacatc gagaagctaa agagaaagcg gaagccgact taaaagcatt ctcagggatt
     4561 gacgatccga aagctgcact cgaggcatta aagacggttg ccaatttaga tgctaaaaag
     4621 ctgattgatg ccggtgatgc ggaaaaagtc aaagcggaaa tcatcaaagg ttacgatgag
     4681 aaattagctg tggcaaccgc tcaagccgaa aaactgcaac agcagttaca cgctgaatta
     4741 atcggtggtt cgtttgctcg gtctaaatac gctcaagaac acttgaatat tccgtctgat
     4801 gtcgtacagg cattcttcgg taagcatttt agtatttcgg atgacggcaa agtggtagct
     4861 aaatttgctg acgggggcga aatctttagt cgcacccgcc cgggcgaaaa agcagatttt
     4921 gaagaggcat tagaagcttt agtaagtgct tatccaaata aagacgctat tttaaaacca
     4981 agtggttcaa gtggggcagg agcaggtggc ggatcacgca gttcatctat gccgaaaaca
     5041 ttatcggact gcaaaacaga tgaagagcgt atcgcttatc ttcaagcaaa ttcgtaaggt
     5101 gcaagaggtt gcaccttttt tattttcggt gcaatcgcac cactttttag aggaaaatca
     5161 aaatggcatt tgacctacag gtttttaaca aacaaacgca attagccttg accgaaactg
     5221 tcgatcaggc tattgaaaaa ttcaatgcag catcaggcgg tgcaatcatt ttacagaaca
     5281 agccagctga aggtgatttt gatatccgtg ctagctttaa aggtattgcc ggtttagttc
     5341 gccgccgtaa tgtgtacggt acaggtacgg tagatgcaaa acgtttagag caattactgg
     5401 acgtagcagt taaagtggcg gcaggtacag caccgattga ataccagccg agtcaatata
     5461 aatggatttt attaaatcct gaattggcgg cgattgaaat cggcacacaa cttgccaaag
     5521 cccgtgttgc tgatatgctc aatacggcta ttgccggcac ggttgctgca attagtggca
     5581 atacagcaat gacacttgat gaaaagaccg ccgctccgac attccgcatt ttaaacaaag
     5641 gtgcagcgaa aatgggtgat cgtgccggtt cgcttaaagc gtgggtgttg cactccacaa
     5701 ccttacacgg cttatacgat aatgccttaa ccaatgcgga aaacttattc aagtacgaaa
     5761 acgtgaacgt aattcgtgac ccgtttgggc gtgtatttgt cgtcacagac agcccggctt
     5821 taatggcttc agacggtaca tttaacacct taggcttggt tgaaaatgcg gtggtagttt
     5881 ccggcaacaa tgactttgac agcgtgttag tgccgaaaac cggcggagaa aacctttcag
     5941 cagtttacca agctgaatgg acctataact taggaatcct aggttataaa tgggatatga
     6001 ccgctggtgg taaatcaccg aacgataccg ccctaggcac accgacgaac tgggataaat
     6061 cggttacctc caacaaagac accgccggtg tattggtaaa aacgaagtaa tttttaaccg
     6121 cttgtagata aggtttacaa gcggttgttt ttttatctgg agtttgcaaa tgaaacgaat
     6181 actttatttt acaacggatt tttcggcaaa aaacattgcc tttgccaaag ctcacggtgt
     6241 attaatgcgg aatctgaacg cttaccaccc atcagacacc ttagaaaatg cagatgcagt
     6301 gtgcggtaac gtacctcaag cttatcaaca tttaccgttg tttgaattgc ctgagtctaa
     6361 ccaaaaatca ggtcaagatt tgaaaacctt aaaaaccgaa gaaattaagg aaaaactgac
     6421 tgaattaggt attgcttttg aggcgaatgc caaaaaagaa acattactaa ccttactcac
     6481 tcaggcggtg ggacgtgacg gaacaaacga tgctaaatag ttatatgacg gttgagcaag
     6541 ccaacgccta tcacgacatc agaatgagcc gtgaggcgtg gaatgcgtta agcgatcaag
     6601 aaaaacagca acgattggtg tcagcgtctg attttctgga tttcaattat cgtttttcag
     6661 gcgaaaaagc agatcttact caagagcgtg aatttccacg caagggtttt gaagctatcg
     6721 gtattcctaa agccgtgcaa tttgcggtat gtgagttggc attgcaagat aacttgaccg
     6781 caaatcaaga agctcaaatg agtagcgtaa gagttggccc ggtttcagtt aattatgata
     6841 acagttcacc gcaaaacagc gtgaatcggt ttgagtatgt gaggcagttg ctttccactt
     6901 ggttagatcg atcttctttc ggcacggtta agttggagcg tagttgatgg cggattttta
     6961 cggcaattta gggaaaatct cccattcttt gattaagcaa ttcgggcagc cttgtagtgt
     7021 aacaattaac gaacaaggca gatacaaccc tgcaaccggt gagcggaaaa aaggtagctc
     7081 aacggttcac gcaggctatt gtctgtttga taatttggcg tttgatttcc gcaatcagca
     7141 atctgtcagc gttcaacaag gcgatgtgat gatttatctc actgccgatt gcaaaccggt
     7201 attaaatgct gtgattgaag caaacggcga aaaatggtcg gtcatcaacg tccagcctat
     7261 acgcccagca gctaccacga tgatttatca agtacaaggg agaaaagccg atgggtagtt
     7321 ttcacgctca aatcgcccgt tttgtggaac aaacgcaaca aaaagcggat agggcgttaa
     7381 gggtaattgc cctgcaaacc ttaagtgggg tgcagaagaa atcgcctgtc gataccggac
     7441 aacttcggcg tagctggacg gtggcattaa atggtttccc gagcagttat aacggcagtc
     7501 aaaccgtgct gaatagtgct aaattcggcg atatgattgt gattgctacc aataaacctt
     7561 atgcaccaat gctcgaatat gggctttacc cgaacccacc aaaaaaaccg accggcaaga
     7621 ccaaaaacgg ttattcaata caagcaccta atggaatggt gcgaattacc gtgcaggaaa
     7681 tgcaagcctt tatccgcaat aatccacaat taggagtaag ctgatgcgac cgattatccg
     7741 ctcggtatta gagcaacatc ttgccgaact caatccgttt aatacggttt gggagggcat
     7801 catcgacagc ccgaaactgc cgtatcaaac cgtatcaatg acgacttcaa ccaacgaaac
     7861 cgccacgatt ggtaatacgc cgaaagccaa acagagcggt tttttgcagg tcacgcttta
     7921 ctatccgcta gatcagggga caaaggcgat tgaggaacga gccgatgaga tcttccgcca
     7981 ctttttcggg caggtctgga ttgaggaaaa tgtgcaaatt ctggtgcaac agccaccgct
     8041 tgtagcctca ctttatcgac tggataacag cattgcctta cccatcacca tctattttac
     8101 cgcttatgaa ctataggaga acccaatgtc tattctaggc aattcacaag gcacaaaacg
     8161 tacggtcgtt tttgccaaag agagttcttt cggcacgaaa gctgctccga caggcgcaaa
     8221 aattatgcct cgtgttgaaa cctcactcaa taccaatttt gaaagttatc aatcggaaga
     8281 gatcagagat gatttacaac gctccgcctc tgtgatcggc tttgaaaagg tcgaaggcga
     8341 tattaaaggc gaactagccg ccggacaatg ggcggcattt tttgcggctg cattacgtgg
     8401 ttcatttacc gctcaggcga aaaagccgat tattaccaaa accacagacg gcaccggcga
     8461 gaaaaacggt aaaattttga ttgtgccgaa aaccagccac acctccgaca gtttcacgct
     8521 ggaagatgtc ttcaaagaca tcaacgtcag ccgccagtat ttgggatgtc gtgtatcgaa
     8581 actcagcctt gatgtgcaac caaacggtat tgcctcgatt acagtctcat ttttagggca
     8641 acgaggcgaa gaaagtacaa cagcctattt taccaatccc accgatttaa cccaatccgg
     8701 caagctggca ggggtaaaag gctcattgca ggtcaataaa cgcccagtcg ggttagtgac
     8761 ggcctttaaa ctggacattg atttaggggc aagcagtgag ccggtattag gggcaaaata
     8821 cgcccctgat gtctttatcg gtacagtggc agtgagcgga tcgtttacga tgtacttcca
     8881 agacaagacg atgattgatg cggtgcgtaa cggcacagat ttatcccttg ctttgcggat
     8941 ggatgccgaa gagcgtacca ataccgacta tttaaccatt atcttaccgg gtgtcaaagt
     9001 gacctcaaac gagttggacg atggggcgaa aaacattatg cagacactca attttgacgc
     9061 attccctgcg gtatgggatt cagcaagcca aatcgacaac gtgctaaaag tcgccaccac
     9121 aatgattgtg caagacagcc tcgcttaatc gaaattttgc aaaaaaataa ccgtatctaa
     9181 ccgcttgccc tcaaacaagc ggtctttttt atccccaatt tacaaaagga aacccaaatg
     9241 aatttaaacg cattaagtaa agaaaaacag ttagccgaac accgttttga gctggttcac
     9301 cctgttagtg gcgaaccgct cggcgtgttt atgagcgtcg tgagtgctaa gagtgataag
     9361 gctcaacgct ttgccgaaaa acaattacgc caagaacaga tgagagagct ggaaaatgcc
     9421 aaatcccgca agccgaaatt caaaggctta ggcgatatga ttgccgaaag tcgtgcaatg
     9481 gcgattgacc gcttaaccgg ctgggagaat gtcgaatgga acgaaaaacc gttggagttt
     9541 tccgaccaga atgcggagct acttttaacc gaatgtgatt ggattgtgga gcaaatcttt
     9601 gagcattcga acgatctggg aaagttcttg aagagctaat tgatgattta caggtgtatg
     9661 cagagaaaac gtttaagttg gataaaaaac ttaaaggcag cgaaagtacc ttgcgagagc
     9721 atttgcaggc aatcgaaatg caaactggca ttacaccaga agaattgcat aaccctgaac
     9781 ccagtccagc ggtggcctat ctgctgggct ggttcttcga gttggcaatg agccgacaat
     9841 cgggtatgag cttaaaccca attagctaca ctgaaattga tgcgtggagc aggctttttg
     9901 ctcgtcatct cgaacaatgg gagatcagcg taattaagca gcttgatatg atttacttga
     9961 acgtacaaca aacggagtag tatggatact ttcaactttc agcccaattg ggggcttaac
    10021 gtacagagaa agccagaagt gatgaaaatc gcctttggtg acggttacga acaagtcgcc
    10081 cctaaagggt taaaccataa tctccgcact tattccgctg ttttcaccgg cacagaagca
    10141 cggattaaac agattgaggc attttttgaa cgacaaggcg gctataaggc ttttctttgg
    10201 acaccttacg gcgggaaaga ggggaaattc cgctgtgaag agtgggaggt aagcataagc
    10261 agcgggaaat ggacgctgtc ggcgacgata agagaagtgt tgtagttttt tctgattttg
    10321 tgaactggtt cacactctgt gggttggata taggttagaa tttaagtcta atttgcttaa
    10381 cggagtcttt tatgaaaaaa atttttgttt cagccttatt gctcacttgc tcgttatctg
    10441 cacttggaaa ttcctcgtat gagttgatta ttgactcaat gcaagatctt gaaaagcata
    10501 aacccgaaat tctatctata ccagaagcgg atagaaatac ttttattcgt tatatgatgc
    10561 gaaaagaact gcggataaag ttaaatcaag gcagattagc ggatggtcta actgtgagag
    10621 aagctattca aaatcaacag gcatttgaaa aagatagaaa tagcaaaatg cagcaggaga
    10681 agcaaaaaaa agaaacagag aaagcagaaa aagaaaaagc tgttacggat tttaaccaaa
    10741 aatttgagct atccattaca ggggcgagaa aggcaaaaaa tgcactaaat caagatattt
    10801 tgcttgtttc attaagtcta aaaaataact cagataagcc aattatcgct gtacaaccgg
    10861 atattcaatt tgtactgggt gaagataaac aaactatttc atccatgcgt ccaaaaaaat
    10921 ttgaaaacgg cattccgcct aatggctcag agatttttga gtttgggttt gatttagatg
    10981 atatgtttgc tttgaaagca gaaaaaaata tagagaaatt gagggcagtc ttccaaacag
    11041 cagaagttct ttttgctgat ggaacaactg aaaaacttca atagtaattg gtaaatcttc
    11101 attggccgct tgtagaaata caggcggttt ttttattgga gcaagctatg gcagatttag
    11161 caacactggc gattaaaatc gaaacagaag gcgcaagccg agcaagtgca gatctaagta
    11221 aggtcgagca atctgcaaag aacacagaga aagccgcaga taatctgacg cgcgcaatgg
    11281 gaaatttgaa gcggatttta gcgattgcag ggctggctgg tgggttatcc gcttacctag
    11341 atatggctga aagaatgcag tcgttaaacg cacagcttaa atttgttact aactctcaat
    11401 acgaattcaa tagcgcacaa aaagagcttt ttgcgattgc gcagaatacg cgcgctagtt
    11461 tggaaagcac cacgcaactt tatattaaat cttctcaggc actgaaagat tacggctacg
    11521 cgcaaaagga tattctcaca tttaccgaaa ccattaacaa agcaatggca gttggcgggg
    11581 ttaagccaca agagcaagct agtgctttac tccaattatc acaggcatta ggttcaggga
    11641 aactgcaagg agatgaattc cgttcaattt cagaagctgc accgattatt ttagatacgc
    11701 ttgccgagta tatgggtaaa agtcgcgatg aagtaagaaa actcgcatcc gagggtaagc
    11761 tcaccgcaga cttactgttc aatgcgttta acggttcaag cgctaaaatt accgaaaaat
    11821 ttaatcaaat gccgctaaca tttggcggtg caatgcagca gttgcagaat gccacattga
    11881 aatttatcgg tgacctagat agtgcaaatg gcttgagtgg aatgttagct caagccatta
    11941 gttttttagc acagaatttt gatgtgttag gcaaggcttt gatttatgca accggtgctt
    12001 atattgcgtt taatgcagtt gcctttgctc agaattttgc aaaagcaacc ggtggtgtcg
    12061 gtttattaag tagtgcattt ggttatttga ctacgatgat ccgaggtgca actgttgcaa
    12121 tgatggctaa tcctatcgag cttttaacaa ctgcaattat tggggctgct tttgtatttg
    12181 atgcttttat cagtgatata gaggtaggtg cagcaacctt tgatgcgact tggggagatg
    12241 ttgcgacagc tgtgtgggat gattttaaag atttaacttc agatgcggca gattggttag
    12301 tcactcaatg ggataaagca accgccagtg cagcgagttc gttcagttcc ttaggtgttg
    12361 atattggctc agtatgggag acggtgcaat ccattacgaa aacattgatc aatagtatta
    12421 ttggtctgtt tgttggagct tatcaagcca tcgtgcttgc ttggaataat tttcctgcca
    12481 caatggaaaa cttgggtgtg atggcggtaa atgctcttgt cgatttggtt caaaaaggca
    12541 tcaatagcat tattcagctt atcaaattac cgattgagct tttaaacaga gcctcatcta
    12601 cttttggtgg aggaaatctg attgatacat caggttggaa ggcaagctta gatgatttta
    12661 aactaaaggc aagccgcgag gcagaagttg ttggtcaatc aattagccaa gcatttgcgg
    12721 atagtatcac cacagattac ataggcaatg cagttaattc agtgagtgac tatattgatg
    12781 gagcggcagt tcgtgggcgc ttaaaacgtc aattagatga aaccgcctct gacgatcaag
    12841 gtacgcagtc accagctaaa aaaacattag ctggaaataa taactctgct agtgactgga
    12901 aaaactacct caatgaactt gaacgagcca atgccgatgg attagcccgt attgcacttg
    12961 agcaagatcg ctcaatgcgt gaaatgttgg aaaaggcgaa gaaagccggt gcaagtcacg
    13021 ctgaaattga aaaagccaaa atgctgatta cagaacgtta tgctaaagag cgaatggaaa
    13081 ttgccgagaa gtatgtgccg agtctgaagt ttgaggaaga actcaaagat cagattaagg
    13141 aaattgatga actgcaaaag ttaaacctga ttaccaccga gcaagcaggt cttgcgaaag
    13201 aggcgttagc aggcaaatat cagccggtag ttgaaatcca acagcaatac atcaatcaac
    13261 tgagagagat tgaagcatta aaacaagccg gtgtattaag caaacctcaa gcagaagtag
    13321 cggccgaaaa agccaaatgg gacgccggca cacaaaaagc caaaatcgca ggtaaaaacg
    13381 ccgttagccc ttatgaaaaa tggaaatcgg aatttgaccc aatgcaggca attcaaaatg
    13441 agcaagcctc aaagttggca gaagtgcaat cgatgtacga tcagcatttg atccaatatg
    13501 aggattttat caacgctaaa gcacaaattg atgctaaggc gactgctgat actcatcaac
    13561 tgtttatgaa cagtattagt gggtttggtt cggcgataga tacgatgtta ggcgtgatga
    13621 aaaacgcagg gcaagagcaa tcaggtattt accgcacgat gtttgcgatg tcgaaagcgt
    13681 ttgctattgc ggaatcaatt ctgaacttga atcgtgcaat tactcaagca atgagcgatc
    13741 aaacagctat tacaccggct caaaaatttg caaatatggc ggctattgct agtgccgggg
    13801 cgagcttgat ttctaatatc cagtcagtct cattaggcgg tatggctcac agcggtattg
    13861 acaatgtgcc gaaagaaggc acttggttgc tggataaagg tgagcgtgta gtggatagtc
    13921 gtactaacca agacttaaaa acctttttat ccaatgctaa tcgtggcggt gcaagtggtc
    13981 aaagatcggc gataaatgtc aaaattatta ataacgggca acccgtagag gcgaaagtca
    14041 gcagtgaaga gactgtagat ggcaatatcc aaatgacggt ggaactgctg aagaaaatgg
    14101 atcaaatcgc cgatcaacgc taccgtagaa atcagttaaa tgatttaaga acaggtggaa
    14161 cattatctaa ataggtgaag tatgccaatt agtatttcta accaaatgaa actagatctt
    14221 gccaaacttg agcaaaatgc aatgctggac ttgtacgagg ttgatttgcg caatctcaaa
    14281 gataaaagtg gtaatgctgg cagagtttac cgcttttatt ctgggctaaa tgaactcaaa
    14341 acaagtatcg tctggcaagg gcggacttac gatccgtatc ctattgaggc aagtggattt
    14401 gaacgaaaca gtagcggccc gagcaatcgc ccgactctca cgctatcaaa tctgtttggt
    14461 ttaattacca gtattgcgaa tcagtttgac gaatgtatcg gtgcgattgt ccgccggcat
    14521 caggtttatg ctcaatattt agatgccgtg aattttgccg ggggtaatgc gaaagctgat
    14581 ccaaatcagg aaataatcag tcattttgtg attgagcagc ttaccagcct cacccgagaa
    14641 acggcgacct ttacgctggc attaccgatt gaaaccgata atgccaagat ccccagcaga
    14701 attattatgg cggacacctg cacttggatt taccgctcgg cggaatgtgg ctacaccggc
    14761 aagcagtatt ttgatgaaaa agacaaatca acctcagacc caaaagcaga taaatgtagt
    14821 cattgcctta atggttgtga attaagaggc aatcaacgca attttggcgg gtttgtatcg
    14881 gt
//
LOCUS       DANMCL010000073        14366 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.073, whole genome shotgun sequence.
ACCESSION   DANMCL010000073 DANMCL010000000
VERSION     DANMCL010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14366
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.073"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            12..2102
                     /locus_tag="PXF40_001967"
     CDS             12..2102
                     /locus_tag="PXF40_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HDL5803279.1"
                     /translation="MLSYLVFFSKIIKIPNLKGFLPHCEIRRRPLVGKTFIAQKRPNQ
                     IIGWGLRPSAVGSRAYAQKHQLPYIALEDGFLRSLGLGVKGYPPFSLVYDDIGIYYDT
                     TCPSRLEKLLLEKPLQDQEQIKLAERALSQILTYGLSKYNHALDFSEIPSAKEKIVLV
                     IDQTFGDMAVKYGQASEVDFNKMLETAISENPEAQIWVKTHPDVLSGKKKGYLTDLPQ
                     YTDRVRIITEDVNPASLIKLCEKVYCVTSQMGFEALLLGKKVVTFGVPWFAGWGVTDD
                     RNEAVQLLVQQNRRKDRSLLQLFYAAYFDYSRYINPNTGEKGSIFDVIDYLYKAKRLN
                     QRLSGNLYCIGMSLWKQAVIKPFFNLPQCRLHFVRSLNSLKKRPLADNAKILVWSNGK
                     ADVLQFAQQNNIPLLRMEDGFIRSVGLGANLVAPLSLVVDDLGIYFNAENTSRLEQIL
                     LSAEHFSETDLSYAETLRQKLVASHIGKYNVGGGDVKFNAQGKKIILVPGQVEDDASI
                     KSGSPQIKRNLDLLKKVRELNPSAYIIYKPHPDVVSGNRVGQIPTAETRRFADQMVDN
                     ANILDCILIADEVHTMTSLAGFEALLRGKKVHCYGLPFYAGWGLTEDRLKSARRGKSL
                     TLSQLIAATLIYYPLYVDPISRQFIDANQAIHILSQQKRNLTNQRIKRSWVSKQYGKL
                     QHLYRAFKYASHTK"
     gene            2125..3357
                     /locus_tag="PXF40_001968"
     CDS             2125..3357
                     /locus_tag="PXF40_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5803280.1"
                     /translation="MEHYLDELIINSQRILLLQGPIGSFFTEFARWLESEQKEVFKLN
                     FNGGDEYFYPNNSPNTFPYYDSLDNFEAYLIQFCQTHQIDNILCFGDNRYYHKVAKNV
                     CLKLKLVFWAFEEGYFRPEYITLEKWGVNAFSPIPKNHTFFLPYAELPVVSEPEKVSK
                     GFRCMAGKAIPYYWNAYKKRKAYAKYQHHRFLNLKYYLNLWTRSGIKRICYWLHDKGF
                     AKRVEKGEFGEFFIVPLQVYDDTQVRIHSEQKSVERFLREVLNSFAKFAPAHLNLIIK
                     HHPMDRGFIDYKMVIYEFLEQYPQLNGRVFYIHDVPLPVFLRYGKGMVTLNSTSGLSA
                     LLHNMPVKTLGRANYDFEGLTDKQPLDTFWANPQPPNSEVFKGYRQFHLHKTHINGNF
                     YHKSILRYPYNWENEAHR"
     gene            3438..4499
                     /locus_tag="PXF40_001969"
     CDS             3438..4499
                     /locus_tag="PXF40_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5803281.1"
                     /translation="MAIYAIWNNKGGVGKSYLTFQIACEYAKQYPAKKVLVVDLCPQA
                     NSSSMLLGGIEKGEQELAKIHSQVNKNTISGYISERLVSPYRSINSATKYVTQVSTIN
                     EYVPKNVYLVVGDEELEIQSSGILHASQAVHVPDSWRLVHLWVRDLVSDIQNAWDNDD
                     NVVFIDCNPSFTIYTELALAASDRLIIPFSADGSSKRAVKSVLSLVYGVKRHSGDVSS
                     HFYTESQKSKLALPQIYMYVGNRLTINAKASATAFKTVVEEIGDEIYNIWKTNANLFC
                     IHPAGVGTPTNKSSFRKMFQYEVRDANTASVVSGALGIPISRLSSGKRDVLGKNVMVN
                     QSQLDAQVPNIQNLVQCIE"
     gene            4651..6303
                     /locus_tag="PXF40_001970"
     CDS             4651..6303
                     /locus_tag="PXF40_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HDL5803282.1"
                     /translation="MTIFQVAQNWLAQDPDAETRAELEQLIQAAESDEKAKAELTARF
                     DGRLQFGTAGLRGRLQAGSMGMNRVLVAQAASGLAGFIKGYDKEPSIVIGYDGRKNSD
                     VFARDTAEIMAAAGIKTYLLPRKLPTPVLAYAIQYFDTTAGVMVTASHNPPEDNGYKV
                     YLGKANGGGQIVSPADKEIAALIDKVAAGDIRDLPRSQDFTVLDDEVVNAYIEKTASL
                     AKRPKAEINYVYTAMHGVGYEVLSKTLEKAGLPQPYLVSEQIQPDGSFPTVNFPNPEE
                     KGALDLAIKLAKEKNAEFIIANDPDADRLAVAVPDAQGNWKPLHGNVIGCFLGWYLAK
                     QFHAQGKQGVLACSLVSSPALAEIAKKYGLSSEETLTGFKYIGKVENLLFGFEEALGY
                     LVDPDKVRDKDGISAAIMFLDLVCSLKQEGKTLADYTTEFVQEFGAYVSGQISIRVCD
                     LAEIGKLMTALRNNPPSEIGGFKVAEFIDHTKTTRQNDILVFVLENGSRLIARPSGTE
                     PKIKFYLDARGTDAENAEQVLAQFDESVRSLLRQEEYGKQDC"
     gene            6356..7290
                     /locus_tag="PXF40_001971"
                     /pseudo
     CDS             6356..7290
                     /locus_tag="PXF40_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250489.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
     gene            complement(7312..9393)
                     /gene="recG"
                     /locus_tag="PXF40_001972"
     CDS             complement(7312..9393)
                     /gene="recG"
                     /locus_tag="PXF40_001972"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HDL5803283.1"
                     /translation="MSEQLLDGVPLTALSGVGAAISEKLSRIGINNVQDLLFHLPMRY
                     EDRTRITPIADVRPESFATIEGYVQLTEVQFGKRPILSVTLSDSTSKIMLKFFNFNAG
                     MKNSLATGVRVKAFGEIKRGRFMAEIHHPEYQIIRDNQPLVLAETLTPIYSTTEGLKQ
                     ASLRKLTEQALALLEKVKVAELLPDEYNPHKYSLKEALQLLHRPPPTISAEVLEKGDH
                     PAQKRLIFEELLAHNLAMQQLRLGVKQQYAEALTYQTDIKQRFLDSLPFKPTHAQSRV
                     TADIEQDLAKPHPMMRLVQGDVGSGKTLVAALAALLAIDNGKQVALMAPTEILAEQHA
                     NNFANWLNPFGIEVGWLAGKVKGKARTAQLEAIKNGDVQMIIGTHALFQDNVEFHHLA
                     LVIIDEQHRFGVHQRLTLREKGAKENNYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
                     LPPGRTPITTVVISEDRRAEIVQRVYQVCKQEHRQAYWVCTLIDESEVLEAQAAAAIA
                     EDLQRALPDLRIGLVHGRLKPQEKQAIMAEFKAANLDLLVATTVIEVGVDVPNASLMI
                     IENSERLGLAQLHQLRGRVGRGATASHCVLMYKPPLGKISSKRLQVMRDSQDGFYIAE
                     KDLEIRGTGEILGTKQTGMAEFKVADLMRDRKMIPLVQRYAKQIISENQPLAEALIKR
                     WLDNKAEYTNA"
     gene            complement(9397..9825)
                     /locus_tag="PXF40_001973"
     CDS             complement(9397..9825)
                     /locus_tag="PXF40_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HDL5803284.1"
                     /translation="MYRYLFDTNIVSELYKLRNDKMDVNVRQWLRGVNPSQTNISCIT
                     LSEIKTGILLKARKDKEQSDRLNDWFENNVLKAYQTKAFVVNNDIALLASEYHIPNKM
                     DLNDAYIAATAKYHNLILVTRNTKDFIRCDVRLFNPFETA"
     gene            complement(9825..10112)
                     /locus_tag="PXF40_001974"
     CDS             complement(9825..10112)
                     /locus_tag="PXF40_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5803285.1"
                     /translation="MAITITSREFNQNASKVLKMAEKEPVFITKWGKIVNVVSSYMDY
                     QQKKPSEPSFEELFASSENEDVSDEFWQEFEQTLVEIRKSNKPRPVDFGDE"
     gene            10276..12159
                     /gene="htpG"
                     /locus_tag="PXF40_001975"
     CDS             10276..12159
                     /gene="htpG"
                     /locus_tag="PXF40_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HDL5803286.1"
                     /translation="MANNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAA
                     DKLRFKALSEPALYEGDGELRVRVSVDETLGTITIADNGIGMTREQVIDHLGTIAKSG
                     TKEFLNALGTDQAKDSQLIGQFGVGFYSSFIVADKVTVKTRAAGVPAEQGVIWESAGE
                     GDYTVADLEKKERGTEIILHLREDEKEFLNEWRLREIIGKYSDHIGLAVEIQTNEYDD
                     EGKASGQKWEKINKAQALWTRSKNEISDEEYTEFYKHLSHDFADPLIWSHNKVEGKQE
                     YTSLLYVPSKAPWDLFQREQKHGLKLYVQRVFIMDDAEVFMPNYLRFMRGLLDTNDLP
                     LNVSREILQENKVTQSLRSALTKRALQLLEKLAKDDAEKYAQFWQAFGVVLKEGVGED
                     FANKQQVAGLLRFASTQRDDSEQAVSFADYIARMKEGQKAIYFLTADSYQAAKNSPHL
                     ELFHKKGIEVLLLSDRIDEWLVSHLTEFDGKPLQSITKSDLDLGELADKQEEESQKAQ
                     QAEFGSFLERAKGYFGERVKNVVLTHRLTDTPAVVSTDSDEMTTQMAKLFAAMGQQAP
                     EVKYTFELNPDHPMVKKVADLADEAEFADWIELLFEQALLAERGTLENPTAFIKRVNK
                     LLG"
     gene            12537..14252
                     /gene="proS"
                     /locus_tag="PXF40_001976"
     CDS             12537..14252
                     /gene="proS"
                     /locus_tag="PXF40_001976"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HDL5803287.1"
                     /translation="MRTSQYLFSTLKEMPNDAQVVSHQLMLRAGMIRPMASGLYNWLP
                     TGIKVLKKVENIIREEMNKGGAIEVLMPVVQPAELWVESGRWNDYGPELLRFKDRGER
                     DFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFVMKDA
                     YSFHTTQESLQETYDVMYQVYSNIFTRLGLDFRAVQADTGSIGGSASHEFQVLASSGE
                     DDVVFSTESDFAANIELAEAVAVGERQAPTAEMQLVDTPNAKTINELVENHGLAIEKT
                     VKTLVVKGATEEQPLIALVIRGDHELNEIKAQKHPLVADPLEFADEAEIKAKIGAGVG
                     SLGVVNMPIPVIIDRSVALMSDFGCGANIDGKHYFNVNWERDVAVPEIADLRNVVEGD
                     PSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVV
                     AAAIEQHYDDRGIIWPCDEMAPFTVAIVPMNMHKSEKVQAFAEELYANLKAQGVEVIF
                     DDRKERPGVMFADMELIGVPHMVVIGEKNLENGEIEYKNRRSGEKQMIAKESLLAFLK
                     ANVKA"
BASE COUNT         4220 a         2780 c         3274 g         4092 t
ORIGIN      
        1 attaattttt tatgcttagc tatttagtgt tttttagtaa aattataaaa atccctaatt
       61 taaaaggttt tttacctcat tgtgaaatta ggcgaagacc tcttgtggga aaaaccttta
      121 ttgctcaaaa aagaccgaac caaatcatcg gctgggggct tcgtccttca gcggtgggat
      181 caagagctta tgcacaaaaa catcaacttc cctatattgc attagaagac ggctttttac
      241 gctcactagg gctgggtgta aaaggctatc cgccattttc tttagtttat gatgatatag
      301 gtatttatta cgataccacc tgtccttctc gtttagaaaa gttattgctt gaaaaacctt
      361 tacaggatca agagcaaatc aagcttgcag agagagcatt atctcaaatc ttaacttacg
      421 gactttctaa atataatcac gcactagatt ttagtgaaat cccctctgcc aaagaaaaaa
      481 tcgtgttagt tattgaccaa acctttggtg atatggcggt gaaatatggt caagcgagtg
      541 aagtggattt caataaaatg ttggaaacgg caatcagtga gaatccagag gctcaaattt
      601 gggtaaaaac tcaccccgat gtattaagtg gcaagaagaa aggctatttg accgatttac
      661 ctcaatatac tgatagggtc agaattatta ctgaagatgt gaatccggca agtttgatta
      721 aattgtgtga gaaagtctat tgcgtaactt cgcaaatggg gtttgaggca ttattattag
      781 gtaaaaaagt ggttaccttt ggtgtaccgt ggtttgccgg ttggggggta acagatgatc
      841 gtaacgaagc ggttcaacta ttagttcaac aaaatagacg gaaagatcgt tcattactgc
      901 aactttttta tgctgcgtat tttgattaca gccgttatat taatccgaat accggtgaga
      961 aaggctctat ttttgatgtc atcgattatc tatataaagc caaaagatta aatcagcgct
     1021 taagtgggaa tctatactgt attggtatgt cgctatggaa acaggcggta attaagccgt
     1081 tttttaattt gccacaatgt cgattacatt ttgttcgttc gctaaattct ttaaaaaaac
     1141 gaccgcttgc agataatgca aaaattttag tttggagcaa tggcaaagcg gatgtcttgc
     1201 aatttgcaca gcagaataat attccattgt taagaatgga agatggattc attcgctctg
     1261 tcggactagg cgctaattta gttgcaccgc tttctttagt agtcgatgat ttaggcattt
     1321 attttaatgc agagaacact tcacgattag aacaaatttt attgagtgca gagcattttt
     1381 ctgaaactga tttgtcttat gctgaaacat taaggcagaa attggtggct agccatattg
     1441 gaaaatataa tgtgggcggt ggcgatgtaa aatttaatgc tcaaggtaaa aaaataattc
     1501 ttgtaccggg gcaggtagaa gatgacgctt cgatcaaatc aggttctcca caaattaaaa
     1561 gaaatctgga tttactgaaa aaagtgaggg aattaaaccc tagtgcctat attatttata
     1621 agcctcaccc tgatgtggta agtggtaatc gagtcggtca gattcctacg gcagaaacac
     1681 gcaggtttgc ggatcagatg gtggataatg ccaatatttt agattgtatt ttaattgcag
     1741 atgaagtgca tacaatgaca tctttagccg gtttcgaagc attattaaga ggtaaaaaag
     1801 tgcattgcta cggattacct ttttatgctg gttggggatt gacggaagat agattgaagt
     1861 cggcacgcag aggtaaatct ttgacattat ctcagttaat tgccgcaaca ttgatatatt
     1921 accctctgta tgttgatcct ataagcaggc agtttattga tgccaatcaa gcgattcata
     1981 tattgtcaca acagaaacga aacctaacca atcaaaggat taaacgttct tgggtgagta
     2041 aacaatatgg aaaattacag catctttatc gtgcgtttaa atatgcttcc cacactaaat
     2101 aagcgtagag ggtaggaaat taagatggaa cattatttag atgagctaat catcaatagc
     2161 cagagaattt tattgttaca aggcccgata ggctcttttt tcactgagtt tgcccgttgg
     2221 ttagaaagtg agcaaaaaga ggtcttcaag ttaaatttta atggcggaga tgaatatttc
     2281 tatccaaata atagcccgaa tacttttcct tactatgata gcttagataa ttttgaagcc
     2341 tatttaattc agttttgcca aactcatcaa atagataata tcttatgttt tggcgataat
     2401 cgttattatc ataaagtggc taaaaacgtt tgcttgaagt taaagttggt cttttgggcg
     2461 tttgaagaag ggtactttag gccagaatat attacgttgg aaaaatgggg tgtaaatgct
     2521 ttttctccaa tccctaaaaa tcacactttc tttttgcctt atgccgagtt accagtagtc
     2581 agtgaaccag aaaaagtatc taaaggcttt agatgtatgg cgggaaaagc aatcccgtac
     2641 tattggaatg cctataaaaa acgtaaagca tacgcaaaat atcagcatca tcgttttctg
     2701 aatctcaaat actaccttaa tttatggaca aggtcgggaa ttaagcgaat atgttattgg
     2761 ttacatgata aaggctttgc caagcgggta gaaaaaggag agtttggtga atttttcatt
     2821 gtgcctctac aagtttatga tgacactcaa gtgaggattc atagtgaaca aaaaagtgta
     2881 gagcgttttt taagggaagt tctgaattcc tttgccaaat ttgcaccggc acatctcaat
     2941 ttaattatta agcatcaccc gatggataga ggatttatag attataaaat ggtgatttat
     3001 gaattcttag agcaatatcc ccaattaaac ggtagagttt tttatattca cgatgtgccg
     3061 ttacctgtct ttttacgtta tgggaaagga atggtgactt taaattcaac cagtgggctt
     3121 tctgcattgc tccataatat gccggtcaaa accttaggta gagccaatta tgattttgag
     3181 ggattaaccg ataaacagcc attagatact ttttgggcta atcctcagcc acctaattcg
     3241 gaagtattta aaggctacag acaatttcat ttacataaaa cgcatattaa cggtaatttt
     3301 taccataaat cgattttgcg ttatccttat aattgggaaa atgaagcaca caggtgatgg
     3361 aaaatattaa aataagtaat atcttatagc taaattattg tgttattatt acacctattg
     3421 ttaaaagagg gggcattatg gctatttatg caatatggaa taataaaggt ggggttggta
     3481 aaagttattt aacttttcaa atcgcttgtg agtatgcaaa acaataccca gcaaaaaaag
     3541 ttctcgttgt tgatttatgt cctcaagcaa attcatcatc tatgctatta ggcggcattg
     3601 aaaaaggtga gcaagagtta gcaaaaattc attctcaagt aaacaagaat actatttcag
     3661 gatatatttc agaaagatta gtaagtcctt accgttctat taatagtgca acgaaatatg
     3721 taactcaagt tagcactata aatgaatatg taccaaaaaa tgtttatctt gttgttggtg
     3781 atgaggaatt agaaatccaa tcatctggta ttttacatgc ttcccaagct gttcatgttc
     3841 ctgattcttg gcggctagtg catctttggg tgcgtgattt agtttctgat atacagaacg
     3901 cttgggataa tgatgataac gttgtattta ttgattgcaa tccaagtttc actatttata
     3961 ctgaattagc gttggctgct tcagatagat tgatcatccc tttttccgct gatggttcat
     4021 caaaacgagc tgttaagtct gtattatctc tagtatatgg ggttaaaagg cactctgggg
     4081 atgtcagctc tcatttttat acagaatctc aaaagagtaa gttagcatta cctcaaattt
     4141 atatgtatgt aggtaataga ttaacgataa atgccaaagc atcagcaacc gcatttaaaa
     4201 cagttgtaga ggaaataggt gatgaaatct ataatatatg gaaaactaat gctaatttgt
     4261 tctgtattca cccagcaggt gttggtactc ctacaaataa atcaagcttc agaaaaatgt
     4321 ttcagtatga ggtgagagat gcaaatacag catctgttgt ttcaggtgct ttaggtattc
     4381 caattagtcg cttatcatca ggaaaaagag atgttttagg taaaaatgta atggtgaatc
     4441 agtcacaatt agatgctcaa gttcctaaca ttcaaaatct tgttcagtgt atagaataaa
     4501 gaaaaatagc gtatattaag tacgctattt tttatttctg acaaatcttt ttatttgata
     4561 gctcgatcac aaaaaaagaa atatctcctt ttaaataaaa ggactttggg ctaatctaaa
     4621 cagagttttt aaattacata ggagtaaaaa atgactattt tccaagttgc acaaaattgg
     4681 ttagcccaag acccggatgc agagacccgt gcggaattag agcagttaat tcaagcggca
     4741 gaatcggacg agaaagcaaa agcagaatta acagcccgtt ttgacggacg tttacagttt
     4801 ggtacggctg gtttgcgtgg tcgcttacaa gcgggttcaa tgggtatgaa ccgtgttttg
     4861 gtggcacaag ctgccagcgg tttagctggg tttattaaag gttatgataa agagccgtca
     4921 attgttattg gttatgacgg tcgtaaaaat tccgatgtgt ttgcccgtga caccgctgaa
     4981 attatggcag cggcaggcat taaaacgtac ctgcttcctc gcaaattgcc aacaccagtg
     5041 cttgcctatg cgattcaata ttttgatacc acagccggtg tgatggtaac tgccagccac
     5101 aacccaccgg aagataacgg ctataaagtt tatttaggta aagccaacgg tggcggacaa
     5161 attgtttcgc cggcagataa agaaattgct gctctgattg ataaagtagc agcaggcgat
     5221 attcgtgatt tacctcgtag ccaagatttc acggtgttag acgatgaagt ggtaaatgct
     5281 tatattgaga aaaccgcctc actagccaaa cggccaaaag ccgaaataaa ctacgtttac
     5341 actgcaatgc acggtgtggg ctatgaagtg ttaagcaaaa cattagaaaa agccggctta
     5401 ccgcaaccgt atttagttag tgagcagatt cagccggacg gttcgttccc aacggttaat
     5461 ttcccgaacc cggaagagaa aggggcgtta gatttagcga ttaaattggc gaaagagaaa
     5521 aatgccgaat ttattatcgc caacgacccg gatgctgacc gtttagcggt agccgtgcct
     5581 gatgctcaag gcaactggaa accactgcat ggcaatgtga tcggctgttt cttaggctgg
     5641 tatttagcca aacaattcca cgcacaaggt aaacaaggcg tgttggcttg ctcgttagta
     5701 tcctctccgg cgttagctga aattgcgaaa aaatatggtt taagctcgga agaaacctta
     5761 accggcttta aatatatcgg aaaagttgaa aacctattat ttggctttga agaagcctta
     5821 ggttatttgg ttgacccaga caaagtgcgt gataaagacg gcatttccgc tgccattatg
     5881 ttcttagatt tagtgtgcag cctcaaacaa gaaggtaaaa cccttgcgga ttacaccacc
     5941 gagtttgtac aagagttcgg ggcttatgta agcggtcaaa tttcgatcag agtttgtgat
     6001 ttagccgaaa tcggcaaatt aatgacggcg ttacgcaaca atcctccaag cgaaattggt
     6061 ggctttaaag tggctgagtt tattgaccat accaaaacca cacgccaaaa tgacatttta
     6121 gtgtttgtgt tggaaaatgg cagccgtttg attgctcgcc cttcaggtac tgagccgaaa
     6181 attaaattct atttagatgc tcgtggcaca gacgctgaaa acgcagagca agtgctggct
     6241 cagtttgacg aaagtgtgcg ttcgctgctt cgccaagaag aatacggcaa acaagattgc
     6301 taatggcatt aattgagggg gagcttaggc tctccctttt ttaaaggaga caataatggc
     6361 tcaaaaaatt attttagatt gtgatccggg gcatgacgat gcgattgcga tgatgctcgc
     6421 ttgggggaat ccgaatattg atttgttggc agtgactacg gtggtaggta atcaaacctt
     6481 agaaaaagta tcgcgtaatg cgttggcggt tgcggaaatt gctcatattt gcaacgttcc
     6541 ttttgccaaa ggttgtgcca gaccgctggt gcgtgaagtg gaaaatgccc cggatattca
     6601 cggtgattcg ggaatggatg ggcctgtact ccctgaatct acccgacaat ttgagaaaaa
     6661 acacgccgct caattaatta ttgatttgat aatgtcgcac ccggagaaaa gcattacctt
     6721 agtgccgacc ggtgggcaat aaccaatatt gctctagctg cccgccttga gccccgtatt
     6781 attgaaagag tgaaagaagt ggtgctgatg ggcggaggtt atcacaccgg caactggagt
     6841 gcggtggcag aatttaatat taaaattgac ccggaagctg ctcatattgt gtttaatgcc
     6901 ggttggaagg tgacgatggt cggcttagac ttaactcacc aagcacttgc gacccccgat
     6961 gtggttgaac gctttaaggc attaaacagc aaatcggggc agtttgtggt ggaattgctg
     7021 gcgttcttcg ccaaaatgta taaacaggct caaggctttg atgctccacc ggttcacgat
     7081 gcctgtgcgg tggcgtatgt gattgaccca agcctgattg aagttcagca agtgccggtc
     7141 aatattgagc taacaggcac gcatacactg ggtatgacgg tggcggattt ccgctacccg
     7201 ccaaaacagt gtaatacttg ggtagcaaaa aaattagaca aatcccgctt ttgggatttg
     7261 gtaattgaat cggtgaaaaa cctgccgtaa tctaaataac ccgcttgccg gttaagcgtt
     7321 ggtatattcc gccttgttgt ctaaccaacg cttaattaac gcctctgcaa gcggttgatt
     7381 ttcgctaata atttgcttgg cgtaacgttg caccagcgga atcattttgc ggtctcgcat
     7441 taaatccgcc accttaaatt ctgccattcc ggtctgtttt gtgccgagaa tttcgcctgt
     7501 gcctcgaatc tccaaatctt tttcggcaat gtagaaaccg tcttggctat cacgcatcac
     7561 ttgtaaccgc ttgctggaaa ttttcccgag cggcggtttg tacattaaga cgcaatgcga
     7621 ggcggttgcc cctcgcccaa cacgtccacg caactggtgg agttgagcca gcccgagtcg
     7681 ttcggaattt tcgataatca ttaggctagc attcggcacg tccactccca cttcaattac
     7741 ggtggtcgca accagcaaat ctaaattcgc tgccttaaat tccgccataa tcgcttgttt
     7801 ttcctgtggt ttcagccgtc cgtgtactaa cccgatgcgt aaatccggca aggctcgctg
     7861 taaatcttcg gcaatcgctg ccgcggcttg agcctccaac acttcgcttt catcaatcag
     7921 ggtgcagacc caataggctt ggcggtgttc ttgcttacag acttggtaca cccgttggac
     7981 gatttctgct cgccgatctt cagaaatcac cacagtcgtg attggcgttc tacccggtgg
     8041 cagttcgtca atgattgagg tgtcgaggtc agcatagacc gtcattgcca gcgttctcgg
     8101 aatgggggtc gccgtcataa tgagctgatg cggatagtta ttttctttcg ctcctttttc
     8161 ccgcaaggtc agccgttggt gtacgccaaa acggtgttgt tcatcaataa tcaccaacgc
     8221 taaatggtga aattccacat tgtcttggaa cagggcgtga gtgccgataa tcatctgcac
     8281 atcaccgttt ttgattgcct caagttgtgc ggttctcgcc ttgcctttca ctttaccggc
     8341 aagccagcca acctcaatcc caaagggatt aagccagttg gcaaaattat tggcgtgctg
     8401 ttcggcaaga atttcggtcg gtgccattaa tgccacctgc ttgccgttat caatcgctaa
     8461 tagtgctgcc aaggcggcta ctaaggtttt acctgaacca acatcgcctt gtaccagtcg
     8521 catcatcggg tgtggtttgg caagatcttg ctcaatatct gcggttactc ggctttgtgc
     8581 gtgagtaggc ttaaaaggca aactgtcgag aaaacgctgt tttatatcgg tttggtaagt
     8641 aagtgcctct gcatattgct gttttacccc taaacggagt tgctgcatcg ctaaattgtg
     8701 tgccagcagt tcttcaaaaa tcagccgttt ttgagcaggg tggtcacctt tttccaagac
     8761 ttcggcagaa atcgtcggcg gtgggcggtg caataactgc aacgcttctt ttaggctgta
     8821 tttgtgcgga ttgtattcat caggcaacag ctcggcgact ttcactttct ctaataaagc
     8881 gagggcttgc tcggttaatt tccgcagcga ggcttgtttt aacccctcag tggtggagta
     8941 aatcggggtc agggtttcag ccagtacaag cggttgatta tcccgaataa tttgatattc
     9001 agggtggtga atttccgcca taaatcgccc acgcttaatt tccccaaagg cttttacccg
     9061 aacgccggtg gcaaggctat ttttcattcc agcattgaaa ttgaagaatt taagcataat
     9121 tttgctggtg ctgtcggaga gtgtaaccga taaaatcggg cgtttaccaa actggacttc
     9181 ggtaagttgt acatagcctt caatggtggc aaagctttcc gggcgaacat cagcaatcgg
     9241 ggtaatacgg gtgcgatctt cataccgcat tggcagatga aacagtaaat cctgcacatt
     9301 attaatgccg attcgactta acttttcgga aattgccgct cctacgccgg aaagggcggt
     9361 taatggcacg ccgtctaata attgttcact cattatttat gcggtttcaa atgggttaaa
     9421 taaacgcaca tcacaacgga taaaatcttt ggtgttgcgg gtgactaaaa tcagattgtg
     9481 gtatttggcg gttgccgcaa tataagcatc atttaaatcc attttattgg gaatatggta
     9541 ctctgatgcc aatagagcaa tgtcgttatt caccacaaac gcttttgttt gataagcctt
     9601 taatacatta ttttcaaacc aatcatttaa tcggtctgat tgttctttgt ctttgcgggc
     9661 tttcagcaaa atacctgttt tgatttcaga taacgtaata cagctgatat tggtctggct
     9721 aggattaacc cctctcagcc actggcgaac attgacatcc atcttgtcat ttcttaactt
     9781 ataaagctcg gaaactatat tggtatcaaa aaggtagcga tacattactc atctccaaaa
     9841 tcaacaggtc ttggtttatt gcttttgcgg atttcaacca atgtttgttc aaactcttgc
     9901 caaaattcat cgctcacatc ctcattttcg gaagaggcga atagctcttc aaagcttggc
     9961 tcgctaggct ttttctgctg ataatccata taactagaca ccacattgac gattttgccc
    10021 catttggtaa taaaaaccgg ctctttttct gccattttta acactttgct ggcattttga
    10081 ttaaattctc tggaagtaat ggttattgcc atatcgctct ccaaaatgta gtaaaaagat
    10141 gagtgtattt tattaaatgt agtaatatct ttcaattaat tcgctatttg gcaacagata
    10201 ttttgcaaaa aatcttgaaa atctgaccac ttgccccatc tattccctgt tttttaatga
    10261 ataaaggaat acacaatggc aaataatcaa gaaacccgtg gcttccagtc ggaagtgaaa
    10321 cagttattgc aactgatgat ccactcgctt tactccaaca aagaaatttt cctgcgtgag
    10381 cttatttcca acgcctctga cgccgccgat aaattgcggt ttaaagccct ttccgagccg
    10441 gctttgtatg aaggtgatgg cgaactgcgt gtgcgtgtct ctgttgatga aacactcggt
    10501 acgattacga ttgccgataa cggtatcggt atgacccgtg agcaggtgat cgaccatctc
    10561 ggtacgattg caaaatctgg taccaaagaa tttttgaacg cactcggcac tgatcaagcc
    10621 aaagacagcc agcttatcgg gcagttcggc gtgggctttt actcttcttt catcgtggcg
    10681 gataaagtga cagtcaaaac ccgtgccgcc ggagtgcctg ccgagcaagg cgtgatttgg
    10741 gaatctgccg gtgagggcga ttacaccgtt gccgatctgg agaaaaaaga gcgtggcacg
    10801 gaaatcattc ttcacttgcg tgaggacgaa aaagagtttt taaacgaatg gcgtttgcgt
    10861 gagattatcg gcaaatactc cgaccatatc ggcctggcgg tggaaattca gaccaatgaa
    10921 tacgatgacg agggcaaagc aagcggtcaa aaatgggaaa aaattaacaa agctcaagcg
    10981 ctttggacac gctcaaaaaa tgagattagt gacgaggagt acaccgaatt ttacaaacac
    11041 ctcagccatg attttgccga cccgctgatt tggtcgcaca ataaagtcga aggtaagcaa
    11101 gaatacacca gcttgctgta tgtgccgagc aaagccccgt gggatctgtt ccaacgcgag
    11161 caaaaacacg gcttgaaact ctacgttcag cgtgtattta ttatggacga tgcggaagtc
    11221 tttatgccga actacttgcg ttttatgcgt ggcttgctcg acaccaacga cctgccgctc
    11281 aacgtcagcc gtgaaattct gcaagagaat aaagttaccc aatcgctccg ttctgcctta
    11341 accaagcgtg cgttacaact gctggaaaaa ttggcgaaag acgatgccga aaaatatgcc
    11401 caattctggc aagcgttcgg cgtggtgctt aaagagggcg tgggcgaaga ctttgccaac
    11461 aaacaacagg ttgcaggctt actccgtttt gcctccaccc agcgtgatga cagcgaacaa
    11521 gcggtcagtt ttgccgatta tattgcaaga atgaaagagg ggcagaaagc gatctacttc
    11581 ttaaccgcag acagctacca agcggctaaa aacagcccgc acttagagct gttccacaaa
    11641 aaaggcattg aggtgctact gctttctgac cgcattgatg aatggttggt tagccacctc
    11701 accgagtttg acggcaaacc gctacaaagc attaccaagt cggacttaga cttaggcgag
    11761 cttgccgaca agcaggaaga agagagccaa aaagcccaac aggcggagtt tggttcgttc
    11821 ttagaacggg cgaaaggcta ctttggtgaa cgggtcaaaa acgtggtgct gactcaccgc
    11881 ttaaccgaca caccggcagt ggtttccact gacagcgatg aaatgaccac ccaaatggca
    11941 aaactgtttg cagcaatggg gcaacaagca ccagaagtga aatatacttt tgagctgaac
    12001 ccagatcacc caatggtgaa aaaagtagct gatcttgccg atgaagccga gttcgccgat
    12061 tggattgaac tgctgtttga acaagctctg cttgctgaac gaggcacgtt ggaaaacccg
    12121 acagccttta ttaaacgggt aaataaattg ttgggctagc cattactaaa aacggaaatc
    12181 taggtttccg tttttccata ttcaatatat aatggaacaa aaattaaaca atgtattcgg
    12241 gggaataatg tttaaagaaa aagattatga tgaatattta gaggctaaag taaaaaaagg
    12301 tcagattttt actcttgaac aagcaaatgc cgaatggcaa gagattattg agcaaattga
    12361 acgagaaaat taagcataca cagtttaaga aaataccctt agttaaaaca aaataaccgc
    12421 ttacaagcgg ttattttttt ataggatttt gcaaaatttc ctgaaaattt aaccgctttg
    12481 ttttaaaata agcagatttt ttcaggtttc aaagtttaaa aagaatagga atagcaatgc
    12541 gtacaagtca atatttattt tcaaccctta aagaaatgcc gaatgatgca caagtagtta
    12601 gccatcaatt aatgttgcgt gccggaatga ttcgcccgat ggcgtcaggt ttatacaact
    12661 ggttgccgac cgggatcaaa gtgttgaaaa aagtggaaaa tattattcgt gaagagatga
    12721 acaaaggcgg ggctatcgag gtattaatgc cggtggttca gccggcggaa ttatgggtgg
    12781 aatccggtcg ttggaatgat tacggcccgg aattattacg ttttaaagat cgtggcgagc
    12841 gtgatttcgt gcttggcccg actcacgaag aagtgattac cgacttggtt cgccgtgaag
    12901 tttcttcgta caaacaactt ccgctgaatt tataccaaat tcaaacgaaa ttccgtgatg
    12961 aagtccgccc tcgtttcggg gtaatgcgtt cgcgtgaatt tgtgatgaaa gatgcctatt
    13021 ctttccacac cacacaagag agcctgcaag aaacctatga tgtgatgtat caggtttaca
    13081 gcaatatttt cacccgtttg ggcttagatt tccgtgcggt gcaggcagat accggctcta
    13141 tcggcggttc agcctctcac gagttccaag tgttagcctc aagcggtgaa gatgatgtgg
    13201 tattttcaac cgaatcagat tttgctgcca atattgaatt agccgaagcg gttgcggtgg
    13261 gtgaacgcca agcaccaacg gcagaaatgc aattagtgga tacgccaaat gcgaaaacca
    13321 tcaatgaatt agtagaaaat cacggtttag ccattgaaaa aacggtgaaa accttagtgg
    13381 tgaaaggggc aactgaagag caaccgttaa ttgcgttagt gattcgtggc gaccacgagt
    13441 taaacgaaat taaagctcaa aaacacccgt tggtggctga tccgcttgag tttgccgatg
    13501 aagcggaaat taaagccaaa atcggtgccg gtgttggctc gttaggtgtg gtgaatatgc
    13561 cgattccggt gattattgac cgctcagtgg cgttgatgtc agattttggc tgcggtgcga
    13621 atattgatgg caaacactac tttaacgtga actgggagcg tgatgttgct gtgccggaaa
    13681 ttgcagattt acgcaatgtg gtggaaggcg acccaagccc ggacggtaaa ggcacacttc
    13741 aaatcaaacg aggtattgaa gtagggcata ttttccaatt aggcaaaaaa tactcagaag
    13801 caatgaaagc cactgtgcaa ggtgaagacg gtaaaccgct agtgatgaca atgggttgtt
    13861 acggtatcgg cgttacccgt gtggtggcag ctgcgattga acaacattat gatgatcgtg
    13921 gtattatctg gccttgtgat gaaatggcgc catttacggt ggcgattgtg ccgatgaata
    13981 tgcacaaatc ggaaaaagtg caggcattcg ctgaagagtt atacgctaac ttaaaagctc
    14041 aaggcgttga ggtgattttt gatgatcgta aagaacgccc gggcgtgatg ttcgcggata
    14101 tggagcttat cggtgtgccg catatggtgg ttattggtga gaaaaacctc gagaacggcg
    14161 aaatcgaata caaaaaccgc cgcagcggtg aaaaacagat gatcgccaaa gagagcttac
    14221 ttgcgttctt aaaagcgaat gtaaaggctt aattataaat aacaaaattg ggcgtataaa
    14281 atacgccctt taatataaag cagcgagtat ttaactaaag tataaaatac tctattattt
    14341 ttagaatata ggaaatagaa tgcgtg
//
LOCUS       DANMCL010000074        14039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.074, whole genome shotgun sequence.
ACCESSION   DANMCL010000074 DANMCL010000000
VERSION     DANMCL010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 14039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.074"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..633)
                     /locus_tag="PXF40_001977"
     CDS             complement(<1..633)
                     /locus_tag="PXF40_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HDL5803288.1"
                     /translation="MAEGLLLTPYFQTEVGIVFYKVPKDVSPAAFGERTLLQPAPTDL
                     ATVKSGKVANFSANSTACKELAVFAKSAKVRSTLNQRDKYSNDLPYIRFVKSIQTCQC
                     RDGKYCHTEKVLVENKNGAVQLCWHHDKMRMDGEIPNEKLEALADENWEKFIAQQIRL
                     TLRKTQSTAIEFADLVLFASIKGLLDELDSKALQQFLGYPPLNNSGVSKES"
     gene            complement(760..1353)
                     /locus_tag="PXF40_001978"
     CDS             complement(760..1353)
                     /locus_tag="PXF40_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5803289.1"
                     /translation="MTDFDKNTYQTPNYVRNWLNHRYAWFHIDGCSNGQNTLYTYWIG
                     RAADGLDDDKLSCQIADDFLADDLFDVLLDKVSDWGELLRIFVNPPYSDPLPFVQRAA
                     ELKKAGHLVVMLLPADKTTEWYTIIQQHANEVIDIIGYHDEKGTWRTGRIQFINPVTG
                     KPAQGNNKGSMIVVFDPFIEGIVTRQMPLDKIKEWGK"
     gene            complement(1364..2410)
                     /locus_tag="PXF40_001979"
     CDS             complement(1364..2410)
                     /locus_tag="PXF40_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conserved phage C-terminal domain-containing
                     protein"
                     /protein_id="HDL5803290.1"
                     /translation="MRFTSTINNVRLVEWEINITQGALVDLINQASSWAKAVVIDGIT
                     YYWMSFSKVCEELPAVFSKEDTVYRQYKVLKEKGIIDHFKMDGKDYVRLTEKGCEWNK
                     FEPIRESEKNPSIGNNSEQTRKNFRESSEKNPTDNNTNYKNNNDHTTPLNPPAGEPAP
                     AEVVLNYLNSALVTLAVQLGERKPVGYSLKPWAKNITARIRESSVADCCQVVDYLVAK
                     WGRDEKMREYLCPKTIFRQSNFADYFPKSTAWANNGKPVCVNGKWVTPAELEKRLIMP
                     TVDEVRALFQKSLSGNPFKALDFTNKRNLVMYHATINTRNKRPLERDLPMIISQEIKN
                     AVERIDRLRVPTFS"
     gene            complement(2407..3090)
                     /locus_tag="PXF40_001980"
     CDS             complement(2407..3090)
                     /locus_tag="PXF40_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage regulatory protein/antirepressor Ant"
                     /protein_id="HDL5803291.1"
                     /translation="MNQLLNISAPKASITMSSREIAELCEKEHRHVTRDIEAMFSQLD
                     IPAEGYAHFWTHPQNGQTYREFRLPYDLTLTLISGYSVILRKKIIDRWQELESRQGIP
                     QSFSQALRLAAEQQEVIEQQNHQLAIQAPKVAFVEHYVEVGTTKSLRETAKILNFPEK
                     RLIECLERYRVLYRQSGNLLPYQDKQAKQLFAVKTGTAEHGHNFTQTRVTAKGIEWIA
                     QRYASELGQ"
     gene            complement(3148..3336)
                     /locus_tag="PXF40_001981"
     CDS             complement(3148..3336)
                     /locus_tag="PXF40_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cro/Cl family transcriptional regulator"
                     /protein_id="HDL5803292.1"
                     /translation="MKKDDVLEHFGTLEKVAATLGISVSAVSQWGEIIPEKNAYRLQE
                     ITAGKLKVKHSLYRNRSK"
     gene            3461..4117
                     /locus_tag="PXF40_001982"
     CDS             3461..4117
                     /locus_tag="PXF40_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803293.1"
                     /translation="MNTQTLGDRIKSRRKELKLTQKDLATALKGVSHVAVSQWESSTT
                     KPNSENILDLSTVLQCDISWLLRGNGESNVLPASLGMTKVPLISYIQAGQWTGIDDFR
                     ETCGDYEYILTDLEVSEDAFALEIKGDSMEPDFIEGDRVIIDPDVQPHAGEFVAAING
                     DYEATFKKYRPLEDLDEYGRQHFELIALNPDYHKLSTLKQEIRIIGTMVEHRIYRRKR
                     "
     gene            4129..4503
                     /locus_tag="PXF40_001983"
     CDS             4129..4503
                     /locus_tag="PXF40_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803294.1"
                     /translation="MTEFKDVKQAIVEAQLASTPKDKVVNDIMKGSAELLSANDIINR
                     LGIGADEFQELVNLPNHYLRINGGLGAAVYNTRRMFDTHVELVNQELEKNISFPKPDL
                     YILGKARWKKETFKKWLEEQCR"
     gene            4655..5392
                     /locus_tag="PXF40_001984"
     CDS             4655..5392
                     /locus_tag="PXF40_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5803295.1"
                     /translation="MLSKQVLSISESRLSTYLFCFFRNDPTKQKEAIAIYTALQHRTG
                     IYFSLIQEIEVALRNEVSQLLRFAAPNHNLYEFFHFLANDSNAPLNAESKRQLQKAIS
                     ECGRNYNENDIISHISFGFWVNLFNYDIKRNQYVAYWQSVLKPIFGHRFSNFKDLYNT
                     LKQIMRFRNRLYHQEVVWNKRIAKKPTHALENLEKTYKQFELALQKIAPERFAFRQLS
                     QALIWQRQIFFDQQIFEAEIVILPQHI"
     gene            complement(5428..6024)
                     /locus_tag="PXF40_001985"
     CDS             complement(5428..6024)
                     /locus_tag="PXF40_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803296.1"
                     /translation="MKKLLMTLCCLPAFALANETGESCSKIEDSAKRLECYDSVFVKK
                     DTGKDEATDEKSNWEYEQKKDELRNATTYFAKIRSTNTIDFGFPYNSSSMNLMLRKDP
                     KYGNDVIFSVHGQFNGCMIESCKITVKFDDGKLESYRMIGADGGSNDTLFIENAKAMK
                     TFVDKLKKSKKLIVEASFYNYGKGQFTFDTQGLEWKHF"
     gene            6670..6855
                     /locus_tag="PXF40_001986"
     CDS             6670..6855
                     /locus_tag="PXF40_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803297.1"
                     /translation="MNKMKQLAPFALLILLLGIVGRMDYDDHIQMQRYKCERNQGFWQ
                     MESNGNQYCGGKYGTKN"
     gene            6839..7036
                     /locus_tag="PXF40_001987"
     CDS             6839..7036
                     /locus_tag="PXF40_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803298.1"
                     /translation="MARKIDAGVEIVEVDKRFIAKFFYDGKLQHTTYPQYNRQNAIML
                     INRKIERFNIGRDKPIKLYKE"
     gene            7039..8013
                     /gene="ssb"
                     /locus_tag="PXF40_001988"
     CDS             7039..8013
                     /gene="ssb"
                     /locus_tag="PXF40_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HDL5803299.1"
                     /translation="MAGINKVIIVGRLGNDPELRTMPNGDSVAKISVATSTEWTDKTS
                     GEKKQATEWHSIIAFRNLADIIGKYLKKGSQVYVEGKLRTRKWQAQDGTDRWTTEIIA
                     DQLQMLGSSNSGNSNNNWATEPAGNPPPTNPYNHVMTDSESRDFDDDIRVRWITKEQA
                     KQFINNISTDWMKTICSFALLTGARRTEILSMTWDKIDFIRKVAIVSNDIAKSEKARS
                     LLLNDDAIELLQKQRGKNPKYVFVGSKGQALQDINRKIFNKATEKCLLVDFHFHDLRH
                     TWASWHVQAGTPLFTLKELGGWETLEMVKKYAHLNADHLLNHANSVKF"
     gene            complement(8100..8176)
                     /locus_tag="PXF40_001989"
     tRNA            complement(8100..8176)
                     /locus_tag="PXF40_001989"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8140..8142),aa:Arg,seq:tct)
     gene            complement(8201..8277)
                     /locus_tag="PXF40_001990"
     tRNA            complement(8201..8277)
                     /locus_tag="PXF40_001990"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8241..8243),aa:Pro,seq:tgg)
     gene            8447..9307
                     /gene="folD"
                     /locus_tag="PXF40_001991"
     CDS             8447..9307
                     /gene="folD"
                     /locus_tag="PXF40_001991"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HDL5803300.1"
                     /translation="MTAQIISGSEVSSQIKKKVSEKIAHYLEQGKRNPGLAVILVGND
                     PASQVYVGSKRKSCAEIGIASKSYDLPEETTEAELLALIEKLNQDDSVDGILVQLPLP
                     KQIDSTKVIEAILPHKDVDGFHPYNVGRLSQRIPTLRPCTPYGVMKLLETTGVDLYGQ
                     HAVIVGASNIVGRPMALELLLGGCTVTVTHRFTKDLEHHVRQADILVVAVGKPEFIPG
                     EWVKDGAIVIDVGINRGADGKLKGDVEYSVASQKAAFITPVPGGVGPMTVAMLMQNTL
                     QTYENHLQAV"
     gene            9421..10872
                     /gene="thiI"
                     /locus_tag="PXF40_001992"
     CDS             9421..10872
                     /gene="thiI"
                     /locus_tag="PXF40_001992"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HDL5803301.1"
                     /translation="MKFIIKLFPEIMIKSDSVRKRFIKILTSNIRNVLLKETENVSVV
                     RHWDFIEVRAKVDEETALVLDLLKRTPGIHHILEVEETPFTDMHDIFEQTYAAVKAEL
                     EGKTFSVRVRRKGKHDFRSLDVERYVGGGLNQRIETAKVKLTNPDVTVRIDIEHDKML
                     LIKARHEGLGGYPIGTQEDVLSLISGGFDSGVSSYMLIRRGSRVHYCFFNLGGAAHEI
                     GVKQMAYHIWSRYSTSHKVRFIAINFENVVGEILEKVDNGQMGVVLKRMMVRAASRIA
                     ERFDIQAIVTGEALGQVSSQTLTNLRLIDKASDTLVLRPLITHDKEQIIAMAKAIGTD
                     DIAKSMPEFCGVISKNPTVKAIETKILEEEGNFNFEVLEQAVQTASYLDIREIAQQTE
                     KEVVSVETTTELSKNDVVLDIRSPEEVDEKPFRLDGVEVKELPFYKLSSQFSTLDQSK
                     TYLLYCQRGVMSKLQALYLKENGYSNVKVFRVK"
     gene            complement(10917..11624)
                     /locus_tag="PXF40_001993"
     CDS             complement(10917..11624)
                     /locus_tag="PXF40_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YwiC-like family protein"
                     /protein_id="HDL5803302.1"
                     /translation="MFKEKPVISNQHGALAMAMLPFLYAVIESGFSTLHIFFGLSWLF
                     LYFFSYPFLSLFSKKPTERNKKWAKIYFGLSILFALPLIYAQPSILQFLPIILPLGLV
                     QVHYAKQKDERNLWNDIAGILTFGIMGMAAYYLVTKQYQFEILLHPTLFFIATTFYIK
                     SMVRERRNPIYMEISIAIHLVLAMLYILCSLQAVFFAYLIATARAIIVPSFGWNVKQV
                     GMLEFPVILLFLASLIW"
     gene            complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXF40_001994"
     CDS             complement(11692..12666)
                     /gene="pfkA"
                     /locus_tag="PXF40_001994"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HDL5803303.1"
                     /translation="MSKKIKKIAVLTSGGDAPGMNAAIRGVVRTALNEGLEVCGIQDG
                     YYGLYHDKVIPLDRRSVSETINRGGTFLGSARFPDFKRPEVRKHCVETLKKYSIDALV
                     VIGGDGSYMGAKLLTEEFGYPCIGIPGTIDNDIVGTDYTIGYQTALETALDAIDRLRD
                     TSSSHQRISIVEIMGRHCGDLTLSAALAGGCEYVIVPEKGLDKDALMRSIEEGFHKGK
                     RHSIIAITELMTDVHALAKEIEARFGNETRATVLGHIQRGGSPCAFDRILASRMGVYA
                     VELLLQGFGGHCVGIQNEQLVHHDIIDAINNMRRPFKEELFEASRKLF"
     gene            complement(12773..13969)
                     /locus_tag="PXF40_001995"
     CDS             complement(12773..13969)
                     /locus_tag="PXF40_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HDL5803304.1"
                     /translation="MLNTQFRTHFPFFEKSDGWTYLDSAATTLKPDVLIEATSEFYAS
                     AGSVHRSQYDLPQTEQYELARDLVAKRFNVETREAVIWTSGTTQSINTVAYGLEHQIA
                     AGDEIVISVAEHHANFIPWQQLAQRTRAKLVVLPLNDKYEIELETLKNALSEKTKIVA
                     FNLVSNVTGVRQPAEQIIPLIRQSCSAKIVLDIAQAVCSEQVDVQKLDADFYAFSAHK
                     MYGPNGVGVLTGKLQSLEQIQPLVFGGKMLKNITESELTVAELPYRLEAGTPNIAGII
                     GFGQVLAWLEKWDFVALNHQLYDLAEYTCKRLNSYQNLQIIGQQNTPTISFVVKNQHP
                     ADIAAFLTQSKIAIRQGEHCAKPYLRHLEEVGTVRLSLAHYNNQQDVEHFFNALDFTL
                     EILQES"
BASE COUNT         4268 a         2790 c         2844 g         4137 t
ORIGIN      
        1 actttctttg ctcacaccgc tattattcag tggtggatag ccgagaaact gctgtaatgc
       61 cttgctgtct aattcatcaa gcaaaccttt gatactcgca aacaacacta agtccgcaaa
      121 ttcaatagcg gtagattgcg ttttgcgtaa ggttaagcgg atttgttggg cgataaattt
      181 ttcccagttt tcatccgcta gtgcttctaa tttttcattc gggatttcac cgtccattcg
      241 cattttgtcg tgatgccaac aaagctgtac cgcaccgttt ttattctcta ccagcacttt
      301 ttccgtgtgg caatatttgc catctcggca ttggcacgtc tgaattgact ttacaaaccg
      361 gatataaggc aaatcattac tatatttgtc acgctgattt agcgttgaac gaacttttgc
      421 cgatttagca aacaccgcca gctctttaca agcggtcgaa tttgccgaaa aatttgcaac
      481 cttgcctgat ttaaccgtcg ctaaatcggt cggtgcaggt tgcaacaaag ttcgctcacc
      541 gaaagcagca ggagaaacat ctttaggcac tttgtaaaac acaataccca cttcggtttg
      601 aaagtaaggg gtaagtagca aaccttccgc cattattgcc cccatttctc ggtttcatca
      661 taggctttca cgaatagcat aaatacgcca atacagatta aaaaaatcag tacgccaatt
      721 actgcaccaa taccaataaa tagttcccaa taatccattt tatttacccc attccttgat
      781 tttatctagt ggcatctgac gagttacaat gccctcaata aatgggtcaa acacaacaat
      841 catcgagcct ttattattac cttgtgccgg tttacctgtt accgggttga taaattgaat
      901 ccgccctgtc cgccaagtgc ctttttcatc gtgatagcca ataatatcaa ttacctcatt
      961 agcgtgttgt tgaatgatgg tgtaccattc tgttgtttta tccgctggta ataacatcac
     1021 aaccaaatga cctgcttttt tcaattctgc cgctcgttga acaaaaggca gtggatcaga
     1081 atatggcgga ttaacgaaaa tacgcagtaa ttctccccag tctgaaactt tatctagtag
     1141 cacatcaaat aaatcatcgg ctaaaaaatc atcggcaatt tggcaactta atttatcatc
     1201 atctaaaccg tctgccgctc taccaatcca ataggtgtac aacgtatttt gtccgttaga
     1261 gcaaccgtca atatgaaacc aagcataacg atgatttagc caattacgca cataattagg
     1321 tgtttggtaa gtgtttttat caaaatctgt cattgtctaa tccttacgaa aatgttggta
     1381 ctctcaaacg gtcgatacgc tcaaccgcat ttttaatttc ttggctgata atcatcggca
     1441 aatcacgttc aagtggtcgc ttgtttctgg tgttgattgt ggcgtggtac atcactaaat
     1501 ttcgtttgtt ggtaaagtcc aatgccttaa acggattgcc actgagtgat ttctggaaca
     1561 aggctcgtac ttcgtccacc gttggcataa tcaagcgttt ttccagctcc gccggtgtaa
     1621 cccacttacc atttacgcaa acaggctttc cgttattagc ccaagcggtc gattttggaa
     1681 aataatctgc aaaattcgat tggcggaaaa tcgttttcgg gcagaggtat tcacgcattt
     1741 tttcatctcg tccccattta gcgacaaggt aatccaccac ttggcaacag tccgccaccg
     1801 aactttcacg aatgcgagca gtaatatttt ttgcccacgg cttgagcgaa taccccacag
     1861 gcttacgctc accaagctgt accgccaacg ttaccaaagc cgaattgaga taattcaaca
     1921 caacttcagc cggggcaggt tcccccgctg ggggattaag gggggtagta tgatcattat
     1981 tatttttata attagtatta ttatctgtcg gatttttttc cgagctttct cggaaatttt
     2041 tccgagtttg ttcggagtta tttccgatac tcggattttt ttccgactca cggatcggct
     2101 cgaatttatt ccattcacaa cctttttcgg ttaaacggac ataatcttta ccgtccattt
     2161 tgaagtggtc gataatgcct ttttctttca acaccttata ttggcggtaa actgtatctt
     2221 ctttgctaaa aaccgcaggt aactcttcgc aaaccttgct aaatgacatc cagtaatagg
     2281 ttatgccgtc aataaccacc gctttcgccc aactggaggc ttgattgatt aaatcgacca
     2341 atgccccttg tgtaatattg atttcccatt ccactaagcg gacattgttt atggttgatg
     2401 taaatctcat tgtcctaact ccgatgcgta acgttgagca atccattcaa tccctttggc
     2461 ggttactctc gtttgggtaa aattatgacc gtgttctgcc gtgccggttt ttactgcaaa
     2521 aagctgttta gcttgtttat cttgataagg gagtaggttt cctgattggc gataaagaac
     2581 tcgatatcgt tctaaacatt caatcaaccg cttttctgga aaattgagta tcttggcggt
     2641 ttctcgcaat gatttagtcg ttcccacctc aacataatgc tccacaaatg cgactttcgg
     2701 ggcttgaatg gctaattgat gattctgctg ctcaatcact tcttgctgtt ctgccgccaa
     2761 ccgtagagct tgagagaaag attgtggaat accttgtctg ctttctagct cttgccaacg
     2821 gtcgataatt ttcttgcgaa gtatcacgct atagccggaa attagggtaa gggttaaatc
     2881 gtaaggcaat cgaaattccc ggtatgtttg cccattttga gggtgtgtcc aaaaatgggc
     2941 atacccctcg gcaggaatat ctaattgact aaacatcgct tctatatcac gagtaacgtg
     3001 tcgatgttct ttttcgcaca actcagcaat ctcacgacta ctcatcgtaa tgcttgcttt
     3061 tggtgccgaa atgtttaata attgattcat cgaaaatacc tttcgtgttt aattatgtat
     3121 gaaagccacc gttacagcgg tggtttttta tttgcttcta tttctataaa gtgagtgttt
     3181 gacctttaac ttgccggcag tgatctcttg taatctgtac gcatttttct caggaataat
     3241 ctcgccccat tgagaaacag cagatacact aatccctaaa gttgccgcca ctttttctag
     3301 agttccgaaa tgttcgagca catcatcttt tttcatattt tcttaattcc tttcttgaat
     3361 tttatttaag acctcttaaa tatacaatta aaggaaactt aagtcaataa atgttaagat
     3421 aacttaacag caactttatt tttaccttta aggggatact atgaatactc agaccttggg
     3481 cgatagaatt aaaagccgta gaaaagaatt aaaattgaca cagaaagatc ttgctactgc
     3541 gttaaaaggg gtctcacacg ttgcagtatc tcaatgggaa agtagtacga ctaagccaaa
     3601 ttcagagaat attttggatt tatctacagt attgcaatgc gatattagtt ggctcttgcg
     3661 tggtaatgga gagtctaatg ttctacctgc tagcctcggt atgactaaag tcccattaat
     3721 tagctatatt caagccggac aatggacggg aattgacgat tttcgtgaaa cctgtgggga
     3781 ttatgaatat atcctaactg atcttgaggt gtctgaagat gcttttgccc tagaaatcaa
     3841 aggggactcg atggagcctg attttattga aggagaccga gtaattattg atcctgatgt
     3901 acaacctcac gccggtgagt ttgtggcagc aattaatggc gattatgaag ccactttcaa
     3961 aaaataccgt ccgttagaag acttagacga atacggaaga caacattttg agcttatcgc
     4021 tcttaatccg gattaccata aattatcaac gctaaagcaa gaaatcagaa ttatcggcac
     4081 aatggtagag catcgtattt atcgtagaaa gagataggaa ttgataatat gacagaattt
     4141 aaagatgtaa aacaggcgat tgtagaagct caattagctt cgacacctaa agataaagtc
     4201 gttaatgaca taatgaaagg aagtgcggaa ctgctttcag caaatgatat tatcaatagg
     4261 ttaggtattg gggcagatga gtttcaagag ttggttaatt tacctaacca ttatttgcgt
     4321 ataaatggag ggttaggtgc tgctgtgtat aatacaagaa gaatgtttga tacccatgtt
     4381 gagttagtca atcaagagtt agaaaagaat atttcatttc ctaaacctga tttatatatt
     4441 ttggggaaag ctcgttggaa aaaagaaaca tttaagaaat ggttggaaga acagtgtaga
     4501 taaagaaaag gtaggttaaa aaacctacct tttctgaacc gcaaataagc gattctcaca
     4561 ctttacaaag caatccagct cctacgtctg gggcttcggg tccgttgcca gtgcaagtat
     4621 tattacatta aactaaactt gagtaaagga aaatatgttg tccaaacaag tgctaagtat
     4681 ttcagaaagt cggctgagta catatttatt ttgctttttc cgaaatgatc ccacaaaaca
     4741 gaaagaagct attgcaattt ataccgcctt gcaacatcga acaggaattt atttttcatt
     4801 gattcaagaa atagaggtgg cactaagaaa tgaagtcagc cagttgttac gctttgctgc
     4861 acctaatcat aatttatacg aattctttca ttttctagcg aacgatagta atgctcctct
     4921 taatgcagaa tctaaacgcc agctacaaaa agccattagt gaatgcggac gtaactataa
     4981 tgaaaatgac ataatttctc atatttcttt tggattttgg gtaaatctgt ttaattatga
     5041 tataaagcgt aatcaatatg ttgcttactg gcaaagcgta ttaaagccta tttttggaca
     5101 tagatttagt aattttaagg atttatacaa tacattaaag caaattatgc gttttagaaa
     5161 tcggctgtat catcaagaag tggtttggaa taagcgaatt gccaagaaac caacgcacgc
     5221 actagagaat ttagaaaaaa cttacaagca atttgagtta gcactacaaa agatagcacc
     5281 tgaacgattt gcgtttcgtc agctttcaca agcacttatt tggcaacgcc aaatcttttt
     5341 cgaccaacaa atttttgaag ctgaaatcgt tattttgccc caacatatct aagcaaaaag
     5401 ctacgcatct atgtagcttt ttcttaatta aaaatgtttc cactctaacc cttgtgtatc
     5461 aaaggtaaat tgccctttgc cataattgta aaaactcgcc tctacaatta gttttttcga
     5521 ctttttcaac ttatctacaa aggttttcat tgcttttgca ttttcaatga aaagcgtatc
     5581 attgctgcca ccatccgccc caatcattcg ataactttcc aatttaccat catcaaactt
     5641 cacagtaatt ttacagctct caatcataca gccattaaat tgaccgtgta cgctaaaaat
     5701 tacatcattg ccatatttag ggtctttgcg taacattaaa ttcattgatg atgaattata
     5761 cgggaaacca aaatctattg tgttagttga tctaatttta gcaaagtaag tcgttgcatt
     5821 acgcaattca tctttctttt gttcatattc ccaattagac ttttcatcgg tagcttcatc
     5881 tttaccagta tcttttttca caaagacact atcataacat tctaagcgtt ttgcactatc
     5941 ttcaatctta gagcaacttt ctccagtttc gttagctaaa gcaaaagcgg gcaaacaaca
     6001 taaagtcatc agtagttttt tcatataacc tccatagaaa tcccttctta ttttctcaaa
     6061 agcgtggttt tcggtctgtg atcaagctcg caatctcaat aattatattt taatggttta
     6121 aaaaacaatc aattaagaaa tcataactaa ttgaaattta agaaatctta aaaatactta
     6181 ttaaataagc ttaaattttg attgacttgt aatttaagtt ttcttaaact taattcatca
     6241 aaacgagcta cggctcaatg ctctttaaca attcggtgct tgtgcggacg atattaacaa
     6301 cctcgggcag ttgtaaagta atgctttata actcagtaag gttggttaga ccctgacata
     6361 caaatttgaa cgacttgcca aaaagaggtg gcaaggttta ggcaacacac tcgcaaggtg
     6421 tggagagctg aaaaggcaac actggtatca gtcctaagca atcacgctta tctcaagttt
     6481 gagtaagtac ggatacaagc agcacccgac ggaatggcga aagccgggcg ggcgacggcg
     6541 tgggcagaca cgcatttatt ccaaagctca tttcaccaag tgtgtttcgg aatacccaca
     6601 actagacgca agtcgctcca tttgcccacc gtaaaacgtg ggcttttttt aaccctaaag
     6661 gacaatccta tgaacaaaat gaaacaactt gccccatttg ccttgctaat tttgctatta
     6721 ggcattgtcg ggcgaatgga ttatgacgac cacatacaaa tgcaacgtta caaatgcgaa
     6781 cgaaatcaag gcttttggca aatggaaagc aacggcaacc aatactgcgg agggaaatat
     6841 ggcacgaaaa attgatgccg gtgttgagat tgttgaggta gataaacgat ttatcgccaa
     6901 gtttttttat gacggcaaat tacagcacac aacctatcca caatacaacc gccaaaacgc
     6961 aattatgttg attaaccgca aaattgagcg gttcaacatt ggcagagaca aaccaatcaa
     7021 actttataag gaataacaat ggcaggaatt aacaaagtga ttattgtcgg tcgcctaggt
     7081 aacgacccgg aactacgaac aatgccaaat ggcgattcag tcgccaaaat cagtgtagca
     7141 acttcaaccg aatggacgga taaaacctca ggcgagaaaa aacaagccac agagtggcat
     7201 agcattatcg cctttcggaa tttagctgac attatcggca aatacctgaa aaaaggctcg
     7261 caagtgtatg tggaaggcaa gctacgcact cgcaaatggc aagcccaaga cggcacagac
     7321 cgctggacga ccgaaatcat cgccgatcag ctacaaatgc tcggtagctc aaacagcgga
     7381 aacagcaata ataattgggc aaccgaaccg gcaggaaacc caccaccaac caatccatat
     7441 aaccacgtaa tgacggattc agaatcacga gattttgatg atgatatccg ggttcgttgg
     7501 attaccaaag aacaagccaa gcagtttatt aataatatta gtactgattg gatgaaaact
     7561 atctgctctt ttgctttatt aacaggagca aggcgaacag aaatactttc tatgacttgg
     7621 gataaaatag attttatccg taaagtagcg attgtttcga atgatattgc caaatctgaa
     7681 aaagcgagat cgcttttact taatgatgat gcaattgaat tattacaaaa gcagagaggg
     7741 aaaaatccta aatatgtttt tgtaggaagc aaagggcagg cattacaaga tattaaccgc
     7801 aaaatattta acaaagcgac tgaaaaatgt ttattggttg atttccattt ccatgattta
     7861 aggcatactt gggccagttg gcacgttcag gccggcacac cattatttac cttaaaagaa
     7921 ttgggtggct gggaaacatt agagatggta aagaaatatg cccatcttaa tgcagaccat
     7981 ttactcaacc acgctaactc agttaaattc tagtcacaaa ttagtcacaa agtatttttg
     8041 acataggaaa ttaataactg atatttaaat gtaactattt gaaatataag ggtaattaat
     8101 ggcacgccct aaaggattcg aacctttgac ccacgcctta gaagggcgtt gctctatcca
     8161 gctgagctaa gggcgcagat gaagataata taaaaagaag tggtcggcga gataggattt
     8221 gaacctacga cccactggtc ccaaaccagt tgcgctacca agctgcgcta ctcgccgaca
     8281 taagatgttg ttgattatag atttctttgc acaacagtca atcttttttt gtgaatgtcg
     8341 gcttaaatga ttgaagttta tccgttattc aaaattagct tatcaaaaag gctatttttt
     8401 gagagaatga cgaatgtttt gccaagtgat atttcgggag gtagtaatga ctgcacaaat
     8461 tatttcgggg agtgaggttt cttcacaaat taaaaaaaag gtgagtgaga aaatcgctca
     8521 ttatcttgaa cagggtaaac gtaaccctgg tcttgcggtc attttagtgg ggaatgaccc
     8581 agcctctcaa gtgtatgtgg ggagtaaacg caaaagctgt gccgaaattg ggattgcgtc
     8641 gaaatcttat gatttacccg aagaaaccac agaggctgaa ttattagcac tgattgaaaa
     8701 gttgaatcaa gatgattcgg tcgatgggat tttagtccaa ttaccgttac ctaaacagat
     8761 cgattcgact aaagtgattg aagccatctt accacataaa gatgttgatg gattccaccc
     8821 ttataatgtt gggcgtttat ctcagcgtat tcccacttta cgcccttgca cgccatacgg
     8881 tgtgatgaag ttgcttgaaa caactggggt agatttatat ggtcaacacg cagtgattgt
     8941 aggtgcgtct aatattgttg gtcgcccgat ggcgttagaa ttgttgcttg gtggttgtac
     9001 agtcacagtt actcatcgct ttaccaaaga tttagagcat cacgttcgcc aagcagatat
     9061 tttagttgtg gcagtcggca agcctgaatt tattcccggg gagtgggtta aagacggtgc
     9121 tatcgtgatt gatgtaggga ttaaccgtgg agcagacggc aaactaaaag gtgatgtaga
     9181 gtattcagtt gcctcacaaa aagcggcatt tatcacccct gtccccggtg gggtaggccc
     9241 gatgacggtg gcaatgttaa tgcaaaatac cttgcagacg tatgaaaacc atttacaagc
     9301 ggtctaattt tacggatatt ttgcaaatcc tcggcattgg tcgaggattt ctttttctgg
     9361 gctttttcag cagaaaaggc taaaatactt gccattttta ttacacgatc cttattaaat
     9421 atgaaattta tcatcaaact tttccctgaa attatgatta aaagcgactc tgttcggaaa
     9481 cgctttatca aaattttaac ctcaaatatt cgcaacgtat tattaaaaga gactgaaaat
     9541 gtgtctgtgg ttcgccattg ggactttatt gaagttcggg cgaaagtgga cgaagaaacg
     9601 gcattagtgc tggatttgct taaacgcacg ccgggtattc accatatttt agaagtggag
     9661 gaaacccctt ttacggatat gcacgatatt tttgagcaga cttatgccgc agtgaaagct
     9721 gaactagaag gcaaaacgtt tagcgtgcgg gttcgccgta aaggaaagca cgatttccgt
     9781 tctcttgatg tagagcgtta tgtcggtggt gggctgaatc agcggattga aacggcgaaa
     9841 gtgaaattaa ccaacccaga tgttacggtc agaattgata ttgaacatga taaaatgttg
     9901 ctgattaaag ctcgccacga agggttaggc gggtatccaa tcggcacaca agaagatgtg
     9961 ttgtcattga tttcgggtgg ttttgattcg ggtgtatcga gctatatgct gattcgcaga
    10021 ggttctcgtg tgcattactg ttttttcaat ttaggtggtg ccgcacacga aattggcgtg
    10081 aaacagatgg catatcatat ttggagccgt tatagtacct cgcacaaagt ccgttttatc
    10141 gccattaatt ttgaaaatgt agtgggtgag attttagaaa aagttgataa cggacaaatg
    10201 ggcgtggtat taaaacgtat gatggtgcga gcggcaagcc gtattgccga gcgttttgat
    10261 attcaagcga ttgtgaccgg tgaggcgttg gggcaggtct ctagccaaac actgactaat
    10321 ttacgtttaa ttgataaggc atcagatacg ctggtattac gtccgctcat cactcacgat
    10381 aaagagcaga ttattgcaat ggcaaaagcg ataggcactg acgatattgc taaatcaatg
    10441 ccggagttct gtggagtaat ttctaaaaat ccgacggtta aggcaatcga aactaaaatt
    10501 ttggaagaag aaggcaactt taattttgag gtactagaac aagcggttca aacggcgagt
    10561 tatttagata ttcgtgagat cgctcagcaa accgaaaaag aggttgtttc ggttgaaacc
    10621 acaacagaat tgagtaaaaa cgatgttgtg ctagatattc gcagcccgga agaggttgat
    10681 gaaaaaccat tccgtttaga cggggttgaa gtaaaagaac tcccgtttta taaactttcc
    10741 agccagttta gtacgcttga ccaaagcaaa acctacttgc tctattgcca acgtggggta
    10801 atgagtaaac tgcaggctct ttatttgaaa gagaatggct acagcaatgt aaaagtgttt
    10861 cgagtgaaat aatgcctctt tgattgcacc ttaatgattg attaaggtgc aattttttac
    10921 caaataaggc ttgctaaaaa gagtaagatc acaggaaatt caagcattcc aacttgttta
    10981 acattccagc caaagcttgg cacaataatg gctcgggcag ttgcaattaa ataagcaaaa
    11041 aagaccgctt gtagagagca gagtatgtaa agcattgcta aaaccaaatg tattgcaata
    11101 ctgatttcca tataaattgg gtttcttcgc tctcgcacca tactctttat atagaaagtc
    11161 gtagcaataa aaaatagggt agggtggagc agaatctcaa actgatattg tttcgttacc
    11221 agataataag ctgccattcc cattatgcca aaggttagaa tgccggcaat atcattccat
    11281 aaattgcgtt catctttttg tttggcgtag tgaacttgca ctaacccaag cggtagaatt
    11341 atcggtaaaa attgcaaaat cgaaggctga gcgtagatca aaggtaatgc aaatagaatg
    11401 cttaagccaa agtagatttt cgcccatttt ttattgcgtt cagttggctt tttactgaaa
    11461 agtgagagaa aagggtagga aaagaagtag agaaacagcc acgacagccc aaagaaaata
    11521 tgcaaagtgc taaaaccact ttcaataacg gcgtagagaa acggcaacat tgccattgct
    11581 aatgcaccgt gttggttgga tataacgggt ttttctttga acattcaatt tccctcttaa
    11641 tgtggcaaat aaaaaggcga ctaaacagcc gcctttaaat tgtaagaaaa gttagaataa
    11701 ttttctagag gcttcaaata attcttcttt gaacggacga cgcatattat tgatcgcatc
    11761 aataatatcg tggtgaacca actgctcgtt ttgaataccg acacagtgac cgccaaagcc
    11821 ttgcagtaat aattccaccg catagacgcc catacgggag gccaaaatac ggtcgaaggc
    11881 acaaggcgaa ccaccacgtt gaatatgacc taatacggtt gcacgggttt cattgccgaa
    11941 acgtgcttca atttctttcg ctaatgcgtg aacatcggtc atcaattctg taattgcaat
    12001 aattgaatgg cgtttacctt tgtggaaacc ttcttcaatg cttcgcatta atgcatcttt
    12061 atctaagcct ttttccggta cgatcacata ttcgcaacca ccggcgaggg cagcacttag
    12121 ggttaaatca ccacagtggc gacccataat ttccacaatc gaaatacgtt ggtgtgaact
    12181 tgaagtatca cgcaggcggt caatcgcatc taatgcggtt tcaagggcag tttgatagcc
    12241 gatggtgtaa tccgttccca caatatcgtt atcaatcgta cccggaatac cgatacaagg
    12301 gtaaccaaat tcttcggtta ataatttagc ccccatataa gaaccgtcgc caccaataac
    12361 cactaatgca tcaatgctgt atttttttaa ggtttcgaca caatgtttgc gaacttctgg
    12421 tcttttaaaa tcagggaagc gggcagaacc taagaatgta ccgcctcggt tgatggtttc
    12481 agacacggaa cggcggtcaa gtgggatcac tttatcgtgg taaagcccat agtagccgtc
    12541 ttgaatacca caaacctcta aaccttcatt aagtgcggta cgaaccacac cacggattgc
    12601 cgcgttcatt cctggtgcat caccaccact ggttaatact gcaatttttt tgattttttt
    12661 actcatttaa aaacaccttg ttgataaatt aaagttaaat tggaaactgg tgcaaggtta
    12721 caatattcag ccttttcgtt ctactaaaaa atacgtattt ttttgattta gcttagcttt
    12781 cttgcaaaat ttcaagggta aaatctagag cgttgaaaaa atgctcaaca tcttgttgat
    12841 tattgtaatg ggcaagtgaa agtcgaactg ttccgacctc ttctaaatgg cgtaaataag
    12901 gcttggcaca atgctcccct tggcggatcg caattttact ttgggttaag aaagcggcaa
    12961 tatcggcagg gtgctgattt ttcaccacaa agctaatagt cggtgtattt tgttgcccga
    13021 taatttgcaa attttgataa gaatttaacc gcttgcaggt gtattcagcc aagtcataaa
    13081 gctgatgatt aagagcgaca aaatcccatt tttcgagcca agctagcact tgcccaaagc
    13141 cgataatgcc ggcgatattc ggcgtgccag cttccaagcg ataaggtaac tctgccacag
    13201 ttaattcact ttccgtaatg tttttcagca ttttgccgcc aaatacaagc ggttgaattt
    13261 gctccaaact ttgcaatttg ccggtaagca cgcccacacc gtttggacca tacattttat
    13321 gggcggaaaa agcgtagaaa tctgcatcta atttctgaac gtccacttgc tctgagcaaa
    13381 ctgcttgagc aatatctaac acaattttag cagagcaaga ttggcggata agcgggatta
    13441 tttgttccgc tggctggcga actcctgtta cgttagaaac taaattaaag gcaacaattt
    13501 tggttttttc cgataacgca tttttaaggg tttcaagctc aatttcatac ttatcattaa
    13561 gtggcaacac cacgagtttc gcccttgtac gctgtgccaa ctgctgccaa ggaataaaat
    13621 tagcgtgatg ttccgccact gaaattacaa tttcatcgcc tgctgcaatt tgatgctcca
    13681 agccataagc cacggtgtta atactttggg ttgtaccgct tgtccaaatc accgcttcac
    13741 gagtttccac attgaaacgt tttgcgacta aatctcgagc taattcatat tgttcggttt
    13801 gtggcaaatc gtactgactg cgatgcaccg accccgcaga agcgtaaaac tcacttgttg
    13861 cttcaatgag tacatcaggt ttcagcgttg tagcggcaga atctaaatac gtccatccgt
    13921 cagatttttc aaaaaaaggg aaatgggtgc gaaattgggt gttaagcata agttaattcc
    13981 taagagttgt ggaaaattga gttaccaaga aaatacctat tataaaggaa tgttttgag
//
LOCUS       DANMCL010000075        13920 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.075, whole genome shotgun sequence.
ACCESSION   DANMCL010000075 DANMCL010000000
VERSION     DANMCL010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13920
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.075"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(33..752)
                     /locus_tag="PXF40_001996"
     CDS             complement(33..752)
                     /locus_tag="PXF40_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253715.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HDL5803305.1"
                     /translation="MKLKNFLTILPLAVATAVTSAETHTVEHKDKPASFNFSTEVSRT
                     VEKDVMQASVYSQKSGNSLPELKKFVSENLNRVLAEAKKHPSIEVQAEGVTNHVNYNN
                     KGNIDGWDTSGSIQLKSKDFDAMAAVLENLGKDVAIRYIDFSVSPEKMASLEDEMTLE
                     IISKFQHKADVIQKALGAKTYKLVNINIQTPNDGGRPYYEHRAMYAVSSMAQSKSMDE
                     IPLEAGKTTISATASGSVEFE"
     gene            complement(810..1547)
                     /gene="tsaA"
                     /locus_tag="PXF40_001997"
     CDS             complement(810..1547)
                     /gene="tsaA"
                     /locus_tag="PXF40_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HDL5803306.1"
                     /translation="MNSTSNQLTPIQLNPIGFVESPYDEKFSVPRQPNLVAEGKGILR
                     LIPPYNTPDAVRGLEKFSHIWLIFQFHHIPEREWHATVRPPRLGGNERVGVFASRATH
                     RPNPLGLSKVKLEAVVAGGSEVYLKLGSVDLVNGTPIFDIKPYIAFADSEPQAVSGFA
                     QQKPQARLAVRFSEEAKQAVEFCRNFAKFGIEQPLSFLADVIAQDPRPAYQQGKPSER
                     VYGMNLAGYNIRWQIENDTQAIVLSIE"
     gene            1727..2635
                     /locus_tag="PXF40_001998"
     CDS             1727..2635
                     /locus_tag="PXF40_001998"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HDL5803307.1"
                     /translation="MNKNSLFSIWFTTARPKTLPLALASIIVGSALAHWAGKFDVVTT
                     LLAFITTILLQILSNFANDYGDHVKGSDTKERIGPLRAIQHGVIGGEQLKKAVIILSL
                     LSFVSGVALSAYAFETVQDLFFFIGLGIVSIIAAITYTVGKKAYGYLGLGDLFVLIFF
                     GFVAVIGVFYLQAHSLPIMILLPAFGCGLLSVAVLNINNLRDINQDRQAGKNTLIVRI
                     GSQNGRKYHVALLVLAVISYLIFAISEFEHWYSFIFLLSVPLLAKHARFVYQHKDPKE
                     LYPILGQMAGLALLTNLLFSLGIVLG"
     gene            complement(2711..3697)
                     /locus_tag="PXF40_001999"
     CDS             complement(2711..3697)
                     /locus_tag="PXF40_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3298 domain-containing protein"
                     /protein_id="HDL5803308.1"
                     /translation="MKKSLLALLIGSVFLISACEDGKMTQTVLEAEKQIVQLGTELKN
                     AQADLAKKEAEVAELSGVKAENEKLKSELENAQQNTALNVEIVKIFDKKEVIKHQVDP
                     KQEFAIEESTVSAFVSLPKTNFDWLNQLLINQAYDYNEEQGRKLKNPTEEEFKKHREA
                     VYQGLVESVKTEPAIGYDDHISSAFIGQRNNIATFTMMHYTYMGGAHGMHYTQYINVD
                     LAKKAIIGLNDLISPKNQVQLKDILWENYSSVRVDENGNYNGFADKKEFRISDQFYFT
                     PHGIAFVYPPYELGAYAEGDIEVEADWYIINKLLNSEYQRGEKDGFFEELDN"
     gene            complement(3791..5662)
                     /gene="rpoD"
                     /locus_tag="PXF40_002000"
     CDS             complement(3791..5662)
                     /gene="rpoD"
                     /locus_tag="PXF40_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HDL5803309.1"
                     /translation="MENQADQQLEQQSQLELLISQGREQGYLTLSEVHDHLPEELVDA
                     EQIEDIIQMINDMGIQVLEAAPDADDLLLAENIADEDVVEEATKVLSTVESELGRTTD
                     PVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAIAEYPEALSGLLACYAQVETG
                     EMRLSDLVTAFVDPNILEEAPLEDIEAALGEDEESSDVPDVDDENEDENGDSSSDSSD
                     DSSIDPELAREKFEALRSQHEKVLLVIQKHGRTSKKSKEQIEILSHIFREFRLVPKQF
                     DLLVASMQKLMKQVRTEERQIQRYAVEYAGMKKADFLKAFQGHELSEAWIEKAINAKK
                     NAAPKLANYVDNIRVNIANLQNLEQTSGLTIAQIREIGGRISNGELKARRAKKEMVEA
                     NLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAIT
                     RSIADQARTIRIPVHMIETINKLNRISRQCLQEMGREATPEELAERMGMPEDKIRKVL
                     KIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRMATNEVLEGLTPREA
                     KVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD"
     gene            complement(5921..7669)
                     /gene="dnaG"
                     /locus_tag="PXF40_002001"
     CDS             complement(5921..7669)
                     /gene="dnaG"
                     /locus_tag="PXF40_002001"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5803310.1"
                     /translation="MKGTIPRSFIDDLIARTDIVEVINSRVKLKKAGRDYQACCPFHH
                     EKTPSFSVSQSKQFYHCFGCGVHGNVITFLMDYDKLEFPEAIEELAAMHGLEVPRENV
                     IQRDGKPQANFKTKRNLYELMEAVAKFYQQNLSHQIEPQSYLQQRGLSEEIIERFEIG
                     FAPNAFDAALRTFGQSQEDIQKLLDTGVLTKNDSGRIYDKFRNRVMLPIRDKRGRVIA
                     FGGRVLPNDEQGAKYMNSPETVIYHKGSELYGLYQALKVNETPDYLFVVEGYMDVVAL
                     AQFGVDNAVASLGTATTGEQIQQMFRCTEQIVCCYDGDRAGRDAAWRALENALPYLQD
                     GRQLKFIFLPDGEDPDTFVRSQGKEGFEQYVAQNAKPLSDFLFDSLLADVDLSSKEGK
                     SKLAALAVPLINRIPGEMLRVYLRNILGQKLGILDPTQIEALLPTKKAAEKPLHQAVK
                     MKRTPMRLLIALLIQNPYFVKFVPDVSALASLKDPGFTLLTDIVATCQQNAGISMGGL
                     LEHYREDPQYKIVEALANWDHLELPENIERTFIDTLDFLYAKLVELRKEELIAKDRTV
                     GLTDDEKKEYALLMFQ"
     gene            complement(7823..8038)
                     /gene="rpsU"
                     /locus_tag="PXF40_002002"
     CDS             complement(7823..8038)
                     /gene="rpsU"
                     /locus_tag="PXF40_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005701713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HDL5803311.1"
                     /translation="MPVIKVRENESFDVALRRFKRSCEKAGILAEVRAREFYEKPTTI
                     RKREKASLAKRHAKRNFRENARNTRLY"
     gene            complement(8186..8782)
                     /locus_tag="PXF40_002003"
     CDS             complement(8186..8782)
                     /locus_tag="PXF40_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HDL5803312.1"
                     /translation="MSLLPMNEITSLNQLDLQKSYSYADYLLWKFKERVEIIKGKIVA
                     MSPAPTRFHQRISMKMTAKFLEVFDNHQCQIYSAPFDVRFPDENGKVKTVVQPDLCVI
                     CDVSKLDERGCVGAPDLVVEILSPGNTKREMKDKYELYQEQGVKEYWIVSPETRTIQI
                     FVLENGKYIGIQPVAEDEPATSVVFPALSFSTEKLFEL"
     gene            8924..10180
                     /locus_tag="PXF40_002004"
     CDS             8924..10180
                     /locus_tag="PXF40_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HDL5803313.1"
                     /translation="MHLNFKKIDNSHIALFYNVLVATFFVTVLTFKKGYSYVPMALGI
                     IATLSFLFYRFKLKQKWLLDKEDKFFIFSLIGYFLTFAMSAIFNGDGIREIDNPIQIL
                     LLIPLIILFRLYPIKKETVLHFIPIGALVAGCIAIYQRFILNLKFPFPEIMRIQSGNI
                     AILLSLFSIAIAFYWLSKKRIKTGIAYLVFAMFGLFASILTGARGGWLAFIPICFFIL
                     FLNLRQLNKKAIFLILLALISSLSFFISKPEFGIQKRYNAAKNDIIVFLEKGNRHSSL
                     GARFDMWENALIGIREKPLLGHGSTGYETFKKKQIETKQMAKTTLRFNSLHNQYLEAF
                     VKRGVVGFMALMAILIIPFVIFAKRLKAKNREVKCMAILGIVHIISHSFFFLSQSFLA
                     HNSGSLFYFFVLILLYHLVKQNEEII"
     gene            complement(10282..11289)
                     /gene="rfbB"
                     /locus_tag="PXF40_002005"
     CDS             complement(10282..11289)
                     /gene="rfbB"
                     /locus_tag="PXF40_002005"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HDL5803314.1"
                     /translation="MIILITGGAGFIGSALVRYLIEHTPHTVINVDKLTYAGNLASLE
                     SVAHHERYHFEKADICASGQISEIFGKYQPDVVMHLAAESHVDRSISGAADFIQTNIV
                     GTYTLLEAARAYWDTLPEPRKSAFRFLHISTDEVYGDLAKSEELFTEKTPYNPSSPYS
                     ASKAASDHLARAWHRTYGLPTVITNCSNNYGAYQYPEKLIPLMILNALEGKSLPVYGN
                     GLQVRDWLFVEDHIRALYLVLQKGQIGETYNIGGHNEKTNIEVVRSICSILQEMVPNN
                     PLVVGQYADLITYVQDRPGHDFRYAIDTSKIEKELDWKPKETFESGLRKTVEWYLANR
                     N"
     gene            complement(11286..11867)
                     /locus_tag="PXF40_002006"
     CDS             complement(11286..11867)
                     /locus_tag="PXF40_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HDL5803315.1"
                     /translation="MLEKIEKLIDEINKLHLAFSKDYFETGKIEKVNLKHTFAKVPTP
                     HILAYRLNLHESINDYLYRADLEGISYFYRVKTSESILDKIERFKQRSEGYPVNSILN
                     DIFGARIIVSSEVIQQVMESLDYWQEKYGLKNWYLRDKDEYVGIHIYFKNSSNFYYPW
                     ELQIWDKKDAEKNIQSHIKYKRNFVNQISYSPL"
     gene            complement(11888..13159)
                     /locus_tag="PXF40_002007"
     CDS             complement(11888..13159)
                     /locus_tag="PXF40_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HDL5803316.1"
                     /translation="MSIQQKKRHSRWYERIFFSTAVQSILGVMFSSVLPAIYFWGEKF
                     NSIETRSNTIIATSLAFVMIAISLRVLMKYPGNKSASFVFSTVISWYAVLLIVLTIFR
                     FDYSNTLLGTSFILTILFCFIGYFLSRSWIIPKIALVPFGRAINLNRIQNVEWIQLSE
                     PILGEKRINSIAVDLHYPDLSAEWHKFLAKCTLNGIPVYNVRQLEESLTGRVKIRHMY
                     ENDLGSLLPSPIYSLVKRIIDIALIVATFPITLPIMTITAIAIRLESEGGAMFIQKRV
                     GQGGKEFNIYKFRSMCKDSEKDDAQFASSADMRVTRIGKFIRKTRIDELPQFFNVLKG
                     DMSLIGPRPEQTAFVDKFEEEIPFYNYRHIVKPGISGWAQVVQGYAADVDDTKVKVEH
                     DFYYIKHFSLWLDILIIFKTLKTMLTGFGAR"
     gene            complement(13163..13914)
                     /locus_tag="PXF40_002008"
                     /pseudo
     CDS             complement(13163..13914)
                     /locus_tag="PXF40_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355362.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
BASE COUNT         4046 a         2979 c         2479 g         4416 t
ORIGIN      
        1 aaaaatacaa ctctatacaa atctatacat ttctattcaa attccacact tcctgaagcg
       61 gtagctgaaa ttgtggtttt acctgcttct aacgggattt catccataga tttgctttgt
      121 gccattgatg aaactgcata cattgctctg tgttcataat atggtctacc accatcattt
      181 ggagtttgaa tattgatatt aactagctta tatgttttcg cccctaaggc tttttgaatc
      241 acatcggctt tatgctgaaa tttgctgata atttccagcg tcatttcatc ttcaagggac
      301 gccattttct ctggcgatac actaaaatca atgtaacgaa tcgccacatc tttacctaaa
      361 ttttccaaca ccgctgccat tgcatcaaaa tctttgcttt tcaactgaat gctaccagag
      421 gtatcccaac catcaatatt ccctttgttg ttataattaa cgtgattagt cacaccttca
      481 gcttgtactt caatcgatgg atgttttttt gcctcagcca atacacgatt caggttttca
      541 gatacaaatt ttttcagctc cggcaaggag ttacctgatt tttggctata cacacttgcc
      601 tgcatcacgt ccttttccac cgtgcgagag acttcggttg agaaattaaa agaagccggt
      661 ttatctttat gttccacggt atgagtttcc gctgaagtta ccgctgttgc gactgcaagc
      721 ggtagaatgg taagaaaatt tttcaatttc ataatcagtc cttaaaaggg ttaaaaatca
      781 tttcttagat ctcacttgcg taggaaagtt cattcaatcg aaagcacaat cgcctgtgta
      841 tcattttcaa tttgccagcg aatattgtag ccggcaaggt tcataccata aactcgctca
      901 ctaggtttcc cttgttgata cgccgggcga gggtcttggg cgatgacatc ggcaagaaaa
      961 ctaagcggct gttcgatgcc aaattttgca aaatttcggc aaaattcgac agcttgtttt
     1021 gcctcctcgc taaaacgcac cgctaatctt gcttgtggtt tttgctgagc aaaaccggaa
     1081 accgcttgcg gctcgctatc tgcaaatgca atgtaaggct tgatgtcaaa aattggtgtg
     1141 ccgttaacta aatccacgct gcctaatttc aaataaactt cactcccccc cgccactacc
     1201 gcttctaact tcactttcga taagccaagc ggattcggac gatgggtggc acggctggca
     1261 aagaccccga cccgttcgtt cccgcccaag cgaggcggtc tgacggtggc gtgccactct
     1321 ctttcgggaa tgtgatggaa ttggaaaatc aaccaaatat gactaaattt ctccaagcct
     1381 ctgactgcat cgggggtatt gtaaggcgga attaaacgta gaatgccttt cccctccgct
     1441 accaaattcg gctggcgagg cacggaaaat ttttcatcat aggggctttc cacaaaaccg
     1501 atagggttta attgaatcgg ggttagttga tttgaggtag agttcattac gcttttttct
     1561 gttaaaataa tataaaatat tggacataat gatatgaaat tgaggatggt gcaagcgtcc
     1621 acgcttgtac caattcgttt taccatttaa cacaagagtg gacgcttgca ctatcgctta
     1681 aatccttaac atcattgtaa atgaaattac gctaagatta ttctctatga acaaaaattc
     1741 tctcttttcg atttggttta ccaccgctcg cccgaaaact ttaccgctgg cgttagcttc
     1801 aattattgtg ggttcagcac ttgctcattg ggcagggaaa tttgatgttg ttaccacctt
     1861 actcgcattt atcaccacca ttttgttgca gatcctgtct aacttcgcca atgattacgg
     1921 cgaccacgtc aaaggctctg acaccaaaga acgaatcgga ccgctacggg cgattcaaca
     1981 cggtgttatt ggcggtgaac aacttaagaa agccgtgatt atcttaagcc tactctcgtt
     2041 tgtttccggt gttgccttaa gtgcctatgc ttttgaaaca gtgcaggatc tgtttttctt
     2101 tatcgggctt ggcatcgtct caattattgc cgccattact tacaccgtcg gcaaaaaagc
     2161 ctacggctat ttggggctgg gcgatctatt tgtgctgatt ttctttggct ttgtagcggt
     2221 aatcggcgtg ttctacttgc aggctcatag cctacctata atgattctgc tccctgcttt
     2281 cggttgcgga ttgctgtctg tagcagtgtt aaatatcaat aacttgcgtg atattaacca
     2341 agaccgacaa gctgggaaaa acactctcat tgtacgaatc ggtagccaaa acgggcgaaa
     2401 ataccacgtt gcattgttag tgctagcggt catttcttat ctgatttttg caatttctga
     2461 atttgaacat tggtatagct tcattttttt gctgtctgta ccgttactgg caaaacacgc
     2521 tcgttttgtc tatcagcata aagacccaaa agaactctac ccaattctag ggcaaatggc
     2581 agggctggcg ttgctcacta atctattatt tagtttgggc attgtgttag ggtaagttgc
     2641 aaaattttaa caaaactaaa ccgcttgtaa taaaggatta caagcggttg ttttttatct
     2701 aaatttacaa ttagttatct agttcttcaa agaatccatc tttttcgcca cgttgatact
     2761 ccgaattgag caacttatta ataatgtacc aatccgcttc aacctctata tcgccttctg
     2821 cataagcacc taattcgtat ggcggataaa caaaagcaat gccgtgaggg gtaaagtaga
     2881 attggtcaga aatacggaac tcttttttat cagcaaatcc attatagttg ccattttcat
     2941 ccacacgcac gctactgtaa ttttcccaaa gaatgtcttt cagttgaact tgattttttg
     3001 ggctgattaa atcatttaag ccaatgattg cttttttagc taaatctaca ttgatatatt
     3061 gcgtatagtg cataccgtga gccccaccca tataggtgta atgcatcata gtgaatgtag
     3121 caatattatt gcgttgcccg ataaaagcac tggaaatatg atcatcatag ccaatagctg
     3181 gctcggtttt cacactttct accaaccctt gataaaccgc ttcacgatgc tttttaaact
     3241 cttcttcggt tggatttttc agctttctgc cttgttcttc attgtaatca taggcctgat
     3301 taatcaaaag ctggttaagc caatcaaaat tggtttttgg tagagacaca aacgcactta
     3361 ctgtactttc ttctattgca aattcttgtt tcggatcaac ttggtgctta atcacctctt
     3421 tcttatcaaa gattttcaca atttcaacat ttaacgctgt gttttgctga gcgttctcta
     3481 actctgattt taatttttca ttttctgctt tcacccctga aagttctgca acttcagcct
     3541 ctttttttgc taaatcagcc tgagcatttt ttaattctgt gcctaactga acaatttgtt
     3601 tttcggcttc taataccgtt tgggtcattt tgccgtcttc acaagctgaa atcagaaata
     3661 ctgagccaat taaaagtgct aatagtgatt ttttcatctc tccctctttt gtaaaaaata
     3721 cggtaaatat caccgcttgt tatacagatt aaaacaaaat cccctatacc atcaggcata
     3781 ggggaaatga ttagtcgtct aagaaactgc gtaaggtttc cgaacggctc gggtggcgaa
     3841 gtttgcgcag tgctttcgcc tcaatttggc ggatacgttc acgagttacg tcaaattgtt
     3901 taccaacttc ttcgagtgtg tggtctgtgt tcatatcaat accaaaacgc atacgcaaca
     3961 ctttcgcttc acgcggggtt aagccctcta acacttcgtt cgttgccata cgcaggctct
     4021 ccgcagtggc ggaatccaat ggtaattcaa ggctttcgtc ttgaatgaaa tcacctaaat
     4081 gtgaatcgtc atcgtcaccg attggtgttt ccattgaaat cggctctttg gcaattttca
     4141 atactttgcg gattttatct tccggcattc ccatacgttc tgccagttct tccggcgttg
     4201 cctcacgccc catttcttgt aaacattggc gtgaaatacg gttgagtttg ttgatagttt
     4261 caatcatatg caccggaata cgaattgtac gggcttggtc agcaatcgaa cgggtaatcg
     4321 cttgacgaat ccaccaagtt gcataagtcg agaatttata accacggcgg tattcaaatt
     4381 tatccaccgc tttcattaaa ccgatgtttc cttcttggat taaatctaag aactgcaagc
     4441 cacggttagt gtattttttc gcaatcgaaa tcaccaaacg taagttagct tccaccatct
     4501 cttttttcgc acggcgggct tttaactcac cattggaaat acgcccgcca atttcacgaa
     4561 tttgagcaat ggttaagcct gatgtttgct ctaaattctg taagttagca atattgacac
     4621 ggatattatc cacataatta gctaatttcg gtgctgcatt tttcttggca ttaatcgctt
     4681 tttcaatcca cgcttcgctt aattcgtgcc cttggaatgc tttcaagaaa tccgcttttt
     4741 tcatgccggc atattccact gcatagcgtt gaatttgacg ttcttcagtg cgaacctgct
     4801 tcatcagttt ttgcatagaa gcaaccaata agtcaaattg cttcggcacc aaacggaatt
     4861 cacggaaaat atgagataaa atttcaattt gctctttcga ttttttactg gttcgcccgt
     4921 gtttttgaat gaccaataac actttttcat gttggctgcg tagggcttca aatttttcac
     4981 gggcaagttc cgggtcaatt gagctgtcat cactgctgtc tgaactgcta tcaccgtttt
     5041 catcttcgtt ttcgtcatct acatcaggca catcagaaga ttcttcatct tcacctaaag
     5101 cagcctcaat atcctctaac ggtgcttctt ctaaaatatt aggatcgaca aatgctgtca
     5161 ctaaatcaga aaggcgcatt tcaccggttt cgacttgagc atagcaggct aacaggccac
     5221 ttaaggcttc cggatattcc gcaatcgcac attgaacttc gttaatccct tcttcaatgc
     5281 gtttagcgat atcaatctca ccttcacggg ttaaaagctc aactgtcccc atctcacgca
     5341 tatacatacg cacagggtca gtagttctac ctaactctga ttctacggtt gaaagcactt
     5401 tggtggcttc ttctaccaca tcttcatcgg cgatattttc agcgagtagt aaatcatccg
     5461 catcaggggc agcctctaaa acttggatac ccatatcgtt gatcatctga ataatatctt
     5521 cgatctgctc cgcatccacc aactcttccg gtaagtggtc gtgcacttca gaaagcgtta
     5581 aatatccctg ttcacgccct tgactgatca gaagttctaa ttgagattgc tgttctaatt
     5641 gttgatctgc ttggttttcc atagtctatc cgtttattat gcgagcaaaa atagtagtgg
     5701 attataccac taaatttggt tcgacttcat aaattcacaa aaaaattcta tttttctaat
     5761 ttacacatta ctttgatgct tatgagaaca gagaggtgta gcaagagaga taaataactt
     5821 tctttttaga tagaattaat tattttcttc gttcatcact tctgccaaat ctcccctaac
     5881 ccctctttgc taaagagggg aattattcga gcttaaaatt ctactgaaac atcaaaagag
     5941 catactcttt tttctcatca tcggttaagc ccacggttcg gtctttggca attagctctt
     6001 ctttgcgtaa ttccactaat ttggcgtaga gaaaatcgag agtgtcaata aatgttcgtt
     6061 cgatattttc gggtaactct aaatgatccc aatttgcgag ggcttcaaca atcttatatt
     6121 ggggatcttc ccgataatgt tcaagtagcc cgcccatact gatacctgca ttttgctgac
     6181 aagttgcgac aatatcggtt aataatgtaa agccaggatc tttcaaggag gctaaagcac
     6241 ttacatcggg tacgaatttc acaaaatacg gattttgaat caataacgca atcaacagcc
     6301 gcattggcgt acgtttcatt ttgaccgctt gatgtaaagg cttctctgcc gcttttttcg
     6361 tcggtaacag agcttctatc tgcgttgggt ctaaaatgcc taatttctgt cctaaaatat
     6421 tgcgtaaata cactcgcagc atctcgcccg gaatacgatt aattaacggc acagctaaag
     6481 cagcgagctt ggattttccc tcttttgaag agagatccac atccgccagc aaactgtcaa
     6541 ataagaaatc gcttaatggc ttggcattct gtgccacgta ctgctcaaat ccttctttac
     6601 cttgagaacg aacaaaggtg tccgggtctt cgccatcggg caagaaaata aatttcagtt
     6661 ggcgaccgtc ttgcaaataa ggcaacgcat tttctaacgc ccgccaagct gcatctcgac
     6721 cggctctatc gccatcataa caacagacaa tttgctcggt gcaacgaaac atttgctgaa
     6781 tttgttcacc ggtagttgcc gtgcctaaag aggcgactgc attgtccacg ccgaattggg
     6841 caagggcgac cacgtccata tagccttcca ccacgaacag ataatccggc gtttcattga
     6901 ctttcagtgc ttgatacaag ccatataact cactgccttt atgataaatc accgtttcgg
     6961 gcgagttcat atatttcgcc ccttgctcat cattcggcaa cacccgccca ccaaaggcaa
     7021 ttacccgtcc acgcttatct cgaatcggta acattacccg attgcgaaat ttatcgtaaa
     7081 ttcgaccgct atcatttttg gttaaaacgc ccgtatcgag caatttctga atatcttctt
     7141 gtgattgccc aaaagtgcgt agggctgcat caaaggcatt cggagcaaaa ccaatttcaa
     7201 agcgttcgat aatctcttca gacaaacctc gttgctgtaa atagctttgt ggctcaatct
     7261 ggtgcgataa attctgctgg tagaacttcg ccaccgcttc catcaattca taaagattac
     7321 gcttagtttt aaaattagct tgaggcttgc cgtcacgttg aatcacattc tctctcggta
     7381 cttccagccc gtgcatagct gccagttctt caatcgcttc cggaaattcg agtttgtcat
     7441 aatccatcaa aaaggtgatg acattgccgt gtacgccaca gccgaaacaa tggtaaaact
     7501 gttttgattg gcttaccgaa aaggaagggg ttttctcgtg atgaaaagga cagcaggctt
     7561 gataatctcg cccagccttt ttgagtttga cccgactgtt gatgacctca acaatatcgg
     7621 tgcgagcgat aagatcatca ataaatgaac gtggaattgt gcctttcatt gatttcctcc
     7681 tgctctttga atgatacaag cggagcaatt ttgcaaattt tttgcaaaaa acaaccgctt
     7741 gaaatagaaa cgttaaaaac accaaaaccg tgagcctaac ggaatcacgg tttcgatata
     7801 gtttgctaac cagcctaact aattagtata aacgtgtgtt acgtgcgttc tcacggaaat
     7861 tacgtttagc gtgacgttta gcaagtgatg ctttttcacg tttacgaatt gtagttggtt
     7921 tttcgtagaa ttcacgagca cgaacttcag ctaagatacc cgctttttcg caagagcgtt
     7981 tgaaacgacg taatgctacg tcaaatgatt cattttcacg aactttaatt actggcatat
     8041 gccatcacct cagaaaaata tgattaaatt aaaccgcaca caattttggc ggcatagaac
     8101 aaaaaaggta gtgcattcta ccttaagcac tcacataagt aaagtagtat tgtggcataa
     8161 aaccgccgta ttatgttgca tttttctaca gttcgaataa tttctcggtc gaaaaactta
     8221 atgccggaaa gaccaccgaa gttgccggtt catcttctgc caccggctga ataccgatat
     8281 atttaccgtt ttccaacaca aaaatctgaa tagtgcgggt ttcgggagaa acaatccaat
     8341 actctttcac cccttgttcc tggtaaagct cgtatttatc tttcatctcc cttttggtat
     8401 tacccggaga aaggatttcc accactaaat ccggtgcccc tacacagcct ctttcatcta
     8461 acttactgac atcacaaatt acacaaagat caggctgcac tacagttttg acttttccgt
     8521 tttcatcggg aaaccgaacg tcaaaaggcg cagaataaat ctggcattgg tgattgtcaa
     8581 aaacctctaa aaattttgct gtcatcttca tagaaattcg ctgatgaaaa cgagtaggag
     8641 ccggagacat cgccacaatt ttccctttga taatctcaac ccgctcttta aatttccata
     8701 gcaaataatc agcgtaactg taactttttt gtaagtccag ttgatttaag ctggtaattt
     8761 cgttcattgg taataagctc ataccgcctc ctttatcaga aatataaaga tattatgccg
     8821 aataatccct caaattcaac aaaactttcg ctaaaaagag atagataacc tttataccct
     8881 tagtataaaa tgacagcaat tttcattgtt ttaggatatg tcgatgcacc ttaacttcaa
     8941 aaaaatagac aactcacata ttgctctttt ctataatgta ctagtcgcca cattttttgt
     9001 cactgtttta acctttaaga aaggttatag ttatgtgcca atggcattag gtattatcgc
     9061 tacacttagt ttcttatttt atcgtttcaa attaaaacaa aagtggttac ttgataaaga
     9121 ggataaattt tttattttct cgcttattgg ctattttcta acgtttgcaa tgtctgctat
     9181 ttttaatggc gatggcattc gtgaaattga taatcctatc cagattttat tgcttatccc
     9241 tttaatcatc ctctttagac tttacccgat taaaaaagaa actgtattgc actttatacc
     9301 gattggagcg ttggtagctg gttgtatagc aatatatcag aggtttatat taaatcttaa
     9361 atttcctttc cctgaaataa tgcgtattca atcggggaac atagcaatat tattatcact
     9421 atttagtata gcaattgcct tttattggct ttcaaaaaaa agaattaaaa ctggcattgc
     9481 ctacctggtt tttgccatgt ttgggttatt tgccagtatt ctaacaggag caagaggcgg
     9541 ctggcttgca ttcattccca tttgcttttt tatcctattt ttaaatttaa gacagctaaa
     9601 taagaaagct attttcctga ttctattagc acttatatct tcactctcat tttttatctc
     9661 caaaccagaa tttggcatac aaaaacgata taatgcagct aagaatgata ttatcgtatt
     9721 tttagaaaaa ggaaatagac attcatctct gggagctcgt tttgatatgt gggaaaatgc
     9781 gcttatcgga atccgtgaaa aaccgctatt aggacacggt agcacaggct atgaaacatt
     9841 caaaaagaaa cagattgaaa caaaacaaat ggcaaaaaca acgcttaggt ttaatagctt
     9901 acacaaccaa tacctagaag cctttgtgaa aagaggtgta gttggtttta tggcgctaat
     9961 ggctatttta attattccat ttgttatttt tgccaaacga ttaaaggcaa aaaatagaga
    10021 ggtaaaatgt atggcgatat taggcattgt acatattatt tcgcattcat tctttttcct
    10081 aagccaatca tttttagccc ataattcagg ctcattattc tatttctttg tgttaatttt
    10141 actctaccat ttagtcaaac agaacgaaga gataatatga taaaacaata gaagaaagtt
    10201 gggaatataa ccgaggtggt aacttcatct tctaccacag gataaatgtc gggatatttc
    10261 ctctttttct gcttcttact actaattccg attagccaaa taccattcca ctgttttacg
    10321 caagccactt tcaaaagttt ctttcggttt ccagtcgagt tccttttcga tttttgaagt
    10381 atcaattgca tagcggaaat cgtggccagg gcgatcttgc acataagtaa ttaaatcagc
    10441 atattgtcct acaacaagcg ggttatttgg caccatttct tgcaaaatag aacagataga
    10501 acgaaccact tcgatattgg ttttttcatt atgcccgcca atattgtagg tttctccgat
    10561 ttgccctttt tgcaacacca aatagagggc acgaatatga tcttccacaa acagccaatc
    10621 tctgacctgc aagccgttgc cgtaaacagg tagggattta ccttctaagg catttaaaat
    10681 cattaacgga ataagttttt cgggatattg gtatgcccca taattattgg aacagttggt
    10741 gatgacagtc ggtaaaccgt aggtgcgatg ccaagcccga gccagatgat cgctggcagc
    10801 tttagatgcc gaataggggc tacttggatt ataaggggtt ttctcggtaa ataattcctc
    10861 gcttttggct aaatcaccat agacctcgtc ggtcgagata tgtagaaagc gaaacgccga
    10921 tttccttggc tcaggtaacg tgtcccaata ggctctcgct gcctctaata aagtataagt
    10981 gccgacaata ttggtttgaa taaaatctgc tgccccagaa atagagcgat caacatggct
    11041 ttccgctgct aagtgcatta ccacatcagg ctgatatttg ccaaaaatct cagaaatttg
    11101 accgcttgca caaatatctg ctttttcaaa atggtagcgt tcgtgatgtg cgacactctc
    11161 caatgaggct aaatttcccg cataggtgag cttatccaca ttgataactg tgtgtggagt
    11221 atgttcaatc agatagcgaa ctaatgcaga tccgataaaa ccggctccgc cagtgatgag
    11281 gatgatcata aaggtgaata tgaaatttga ttcacgaaat ttcgtttgta tttaatatgg
    11341 ctttgaatat tcttttcagc gtctttttta tcccaaattt gcaattccca aggataataa
    11401 aagttacttg aattcttaaa ataaatatga atacccacat attcatcttt atctctcaaa
    11461 taccaatttt ttagtccata tttttcttgc caataatcta atgactccat tacttgctga
    11521 atcacttcac tagaaacaat aatacgagct ccaaaaatat cgttgagaat gctatttact
    11581 ggataacctt cactacgctg tttaaaacgc tcgattttat ctaaaatcga ttctgaggtt
    11641 tttactcggt aaaaataaga aattccctct aaatctgcac gatataaata atcattaata
    11701 gattcgtgta aattaagacg ataagctaaa atatgtggcg taggcacttt ggcaaaagta
    11761 tgcttaagat tcactttttc aatcttacct gtttcaaagt agtctttcga aaaagctaag
    11821 tgcaacttgt tgatttcatc aatgagtttt tctattttct caagcatgct attcactctc
    11881 taatttatta tcttgcccca aatccagtta gcattgtttt caatgtttta aaaataatta
    11941 aaatatcaag ccataaagaa aaatgcttaa tatagtagaa gtcatgttct acttttactt
    12001 ttgtatcatc aacatctgcc gcataacctt ggacgacctg agcccaaccg gaaatacccg
    12061 gtttaacgat atggcgataa ttatagaatg gaatttcctc ttcaaattta tctacaaagg
    12121 ctgtctgttc tgggcgagga ccaattaagc tcatatcacc ttttaataca ttaaaaaact
    12181 gaggtagctc atcaatacga gttttacgga taaatttccc aatacgagtt accctcatat
    12241 ccgcactcga agcaaactgt gcatcatctt tttcggagtc tttacacata ctacgaaatt
    12301 tataaatatt aaactccttt ccaccttgcc caacgcgttt ttgaataaac attgctccac
    12361 cttcactttc taagcgaata gcaatagcgg tgattgtcat aataggtaaa gtaatgggaa
    12421 acgtagcaac aatcaatgca atatcaatga tacgcttcac taatgagtaa attggagaag
    12481 gaagtaatga acctaagtca ttttcataca tatggcgaat tttgacacgc ccggttaaag
    12541 attcctcaag ctggcgaacg ttatatacag gaataccatt caatgtacat ttcgctaaaa
    12601 atttatgcca ttctgcggac aaatcaggat agtgtaaatc taccgcaata gagttaattc
    12661 tcttttcccc caatattggt tcacttaatt gaatccactc tacattctga attcggttca
    12721 aattgatagc tcttccgaat ggaaccaaag cgattttagg gataatccaa cttcttgaaa
    12781 gaaaataacc aataaaacaa aatagaattg tgagtataaa gctcgtacct agcaatgtat
    12841 tagaataatc aaatctaaat attgttaaca cgattaataa aaccgcatac caagaaataa
    12901 cggtggaaaa aacaaaactt gctgacttat tacctggata tttcattaac actcttaagc
    12961 tgatagctat cattacaaag gcaagagaag tcgctataat cgtattagaa cgagtttcaa
    13021 tagaattaaa tttctctccc caaaaataga tagcgggtaa gacacttgag aacataacgc
    13081 ccaaaatact ttgaacagct gtactaaaaa agatacgttc ataccaacga gagtgtcttt
    13141 tcttttgctg aatgctcata atttatcctt ttcttaattt cttataaagt cttcctaaaa
    13201 gagatctagg caataaccgt ggtaaggctc taagtataaa aaacatgctt gatgagatta
    13261 ttgattgtaa tcccaactct tttttcaatt ttgctaattg gtactcactc ttaatgtaat
    13321 tccacccttt acgccgagcg tacattgcag aacctgaacg aacatttacc agtacatctg
    13381 gtaaattata cacctcatat ttctgtgtaa taactcgtaa ccataaattg taatcttcca
    13441 tataaagatg atgctgatag cctccaacat gctcgatcac agatttttta taggctactg
    13501 ccatatggtt aaaaggattt cttagtaatg ctgaaatacg aatttcatca tcattaatgg
    13561 gcacttgttt tatacccaga gaattagaca ttgtttcgtc aaattcttca acttgtcccc
    13621 ccaataaaac cacatcagga tttttactaa taaaatcaat ttgcttttca aatcgagatg
    13681 gtaagcaaat atcatcagta tccattctaa acacccactc attagagcag tgttttaagc
    13741 cttcatttaa ggccggccta aacccacatt ttgtggtaaa ctaacaacaa caagcggtaa
    13801 tttttcagta aaatgttgca caattcgctc taaatctcca ggaattatac catcaaaaac
    13861 cacaacaatt tcacttgctg gtaaagtttg ggatactaaa gaatctaaac acatctctaa
//
LOCUS       DANMCL010000076        13766 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.076, whole genome shotgun sequence.
ACCESSION   DANMCL010000076 DANMCL010000000
VERSION     DANMCL010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13766)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13766)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13766
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.076"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            44..223
                     /locus_tag="PXF40_002009"
     CDS             44..223
                     /locus_tag="PXF40_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803317.1"
                     /translation="MFKEKGYDEFLAEKIRLGLEDMQSGNGLSLDESKARTKQLIERK
                     ARELANFEQENIIYG"
     gene            216..503
                     /locus_tag="PXF40_002010"
     CDS             216..503
                     /locus_tag="PXF40_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803318.1"
                     /translation="MAKTLRISSRAQNDIEEILASVIEYTGFESSGIRLQEDIYQKFE
                     TIAYMPSAAGRLREDGTREAFTRRYRIVYTELENEVWIITIIHSSRLYPRI"
     gene            complement(629..2731)
                     /locus_tag="PXF40_002011"
     CDS             complement(629..2731)
                     /locus_tag="PXF40_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HDL5803319.1"
                     /translation="MKSFKLLPVSAAVLSVLAANAVAQTASTDAVVLDTVTVTDNQGL
                     KVQSNVVTTKKKDESTQTDLRGLLKDEPAISLGGGNGTSQYLYIRGMGQNSIDVKVDN
                     TYSDSQILYHQGRHMLDPALVKIVSVQKGAGSASAGIGQTNGAVIAKTVDALDLLKNS
                     DKNFGAKLGTGFSTNHAHNFNATLYGKGEIFDALVSGNLVRDRDYKGGKDYVNQFGTN
                     RVPYSALDKTSFLAKLGATLGDHRFVLSHSSERNEGQRLVREEFDVAPNGTKVSPYNR
                     LTVERQAPANRRITVQRTNLEWTGKNLGFAQEATANVYQLVQGRWSENETGNGYAGGV
                     DYATKTKIVTHGANVNFDSALHENVLLKYGVNYRHQEAKPHTKFNPLVKNQEKTDTGV
                     YVEAITAPVDKVTLTTGVRYDHFKFKAMDGKERSNGAFSPSVGLIYEPIEHLSLSASH
                     NYATRSPRLYDALTAHGNRKIVSIGSNTKAEKARNTEIGFNYNNGTFSFDGSYFWQDI
                     KDALGGGRDSHNPNNELIMNLGKIKNRGYELNAGYHNGGFTARIGVAHSKPRFYSPTI
                     WEVNRQTGKREEKPLLSTNPEYASAIGRTWTASLSYRFEQPNLEVGVHHRIVEKVKPE
                     DNFFVTGGTLQTNTGTGKDGYNVTDITLNWKPLKDDSVNVNFAVDNVANKKYNAHGQR
                     GQLSARGREFRAGVNYTF"
     gene            3014..3760
                     /locus_tag="PXF40_002012"
     CDS             3014..3760
                     /locus_tag="PXF40_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5803320.1"
                     /translation="MQLRHKQIMEYIQQFDEANVQELAEHCGVSIETIRRDLNKLDKD
                     GLLHRTHGGAVSHKKRDIGRSFTTRQRLNSEAKRSIAENVLEYLQPESVIALDASSTS
                     WNVAQRIPNIPCTVVSSSMRIIYSLSHKPHIKTIATGGIYSEKYDAFYGPLSEQLLTR
                     LKIDLAILSCTGIADGAIWESNEINISLKRKLIANSKQVFLLADHSKFERKDLFRIED
                     LSCIDKLFINQPPPDFLKNYCLAHQIEIII"
     gene            3956..5719
                     /gene="fucI"
                     /locus_tag="PXF40_002013"
     CDS             3956..5719
                     /gene="fucI"
                     /locus_tag="PXF40_002013"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005619331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HDL5803321.1"
                     /translation="MTTLKSTPVKIGIRPTIDGRRLGVRESLEDQTMNMAKAVAQLIQ
                     SEVRHPNGDFVECVIADSTIGGVAEAAACAEKFKRENVGAVITVTPCWCYGSETIDMD
                     PHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDQSIPDDVREK
                     LLHFARAGLAVATLRGKSYLSIGSVSMGIAGSIVNQQFFQEYLGMRNEYVDMTEIKRR
                     LDRHIYDAEEFKLAMSWVKTYCKEGIDVNAPENQRSPEEREKLWEDVVKMTIIARDLM
                     VGNPRLAELGYSEEALGHNAIAAGFQGQRQWTDHLPNGDFMEATLNSTYDWNGVRAPY
                     IMATENDSLNGVNMLFGNLLTGQAQIFADVRTYWSEDSVERVTGWRPESGFIHLINSG
                     SAALDGTGQHTDRAGKPTIKPAWEVTEEDGKRCLENTCWCPAVHEYFRGGLSSQFLTK
                     GGMPFTMHRINLIKGIGPVLQIAEGWSIDLPENVHDILNKRANETWPTTWFVPRLTGK
                     GAFTDVYSVMANWGANHCVATFGHVGADLITLASMLRIPVCVHNVEDKDVFRPSAWNG
                     FGQDKEGQDYRACANFGPLYK"
     gene            5913..7346
                     /gene="fucK"
                     /locus_tag="PXF40_002014"
     CDS             5913..7346
                     /gene="fucK"
                     /locus_tag="PXF40_002014"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HDL5803322.1"
                     /translation="MPISLIFDCGATNLRTIAINQAGEIVAAHHLPNNTQPDVESPEF
                     HIWDIEEIWSKLMTCAKQTLSQLSEQQRQEIVGISVTTFGVDGALFDKNGKQLYPIIS
                     WKCPRTLPIMENLANYLDVEALYQRNGVGHYSFNTLFKLLWLKENKPEIYQQAESFLF
                     ISSILTYLLTGVQTTDRTMAGTSMMTNIENDSWDKTVLDLLGLTENHFPPMKSAGEVV
                     GTLKGEISQELGLSGQIPVISCGHDTQFAIFGSGAGYNQPVLSSGTWEILMVRTPKAK
                     PQWQFVQNGLTIEFDSQSGYFNPGVQWVASGVMEWFGKRFFSDIANTEHYYRTMIEEA
                     AEVPAGSNGVKLVGNFDGTTAKTGSIIGLSMHITRGEIYRAGLEYMAHRLKEGLDVLQ
                     EVGHFNAESLICVGGGSKNALWNQIRADVLNRPIDVVDFPESTVLGAAMFTFTGAGVF
                     ENPNAAQQAMKPNVKRVEPSSNSQFYK"
     gene            7421..7852
                     /gene="fucU"
                     /locus_tag="PXF40_002015"
     CDS             7421..7852
                     /gene="fucU"
                     /locus_tag="PXF40_002015"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012341412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HDL5803323.1"
                     /translation="MLKGIHPAISPDLLKVLAEMGHGDELVLSDAHFPAHSIHQNVIR
                     ADGLSVATLLEGISALFEFDQYVEAPLAMMQAVKGDTLDPSVEERYLNAIKKVNGTAP
                     KIERVERFAFYDRAKNAYAVVITGELAKYGNIIIKKGVTPV"
     gene            7912..8565
                     /locus_tag="PXF40_002016"
     CDS             7912..8565
                     /locus_tag="PXF40_002016"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HDL5803324.1"
                     /translation="MDRKILARQIIDTCLEMTRIGLNQGTAGNVSVRYKDGMLITPTG
                     TPYEQMTEDSIVFVDGNGKHEEGKLPSSEWQFHLAVYEARPELNAVVHNHAKNCAAVS
                     ILGEPIPAIHYMIACTGTNHIPCVPYAPFGTHQLADYVREGIKHSKAILLAHHGLITA
                     DKTLEKALGIAHEVEVIAEWYLKLLATGKPIPTLNKEQMDIVLGKFKSYGSWVESEQ"
     gene            8627..10156
                     /locus_tag="PXF40_002017"
     CDS             8627..10156
                     /locus_tag="PXF40_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HDL5803325.1"
                     /translation="MQNEVILTMKNISKSFAGVNALKGVELTLRKGEVHALMGENGAG
                     KSTLMKCLLGVYQADEGEIIYKGQPVRFESVLEAQKAGISMIFQELNLIPHLTVAENI
                     FFAREPLKHGLVDKDKMVEESAKLLNFFEIDVDPNDEVRMLSVAKQQMVEIAKALSFD
                     VEVLIMDEPTSALTEKEIDKLFELVDRLRAKGVSIVYISHRMEELKRICNHITIFRDG
                     TYVSNHKFNEITMDEIITKMVGRSLDNHFPPKTAVVTNDIILSIMNAERKGVFEPLNF
                     DLRKGEILGITGLVGAKRTELARAIFGADPLDSGEIFVHENKVSIKDPSDAIKAGIAY
                     LSEDRKLNGVAVRMSIRENITMASMDKVANQIGVISYDEEEKASKTFIDKMEIKTPTI
                     EQKVQNLSGGNQQKVVIGKWLFREAKVMIFDEPTRGIDVGAKYAIYQLLDELAANGVG
                     VIVISSELPEVLGVSDRIIVMREGRMTGMLETKKTNQEEIMHYATGVKNMFAREYGVE
                     K"
     gene            10153..11151
                     /locus_tag="PXF40_002018"
     CDS             10153..11151
                     /locus_tag="PXF40_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803326.1"
                     /translation="MNEKQKEMLRKMAALAGLVLLIIFFSVTNEYFFTSNNIMTVGLQ
                     TSTIALIGIGATCVILTGGIDLSTGSVVALSGVAAAMIVNAGVPVPLGMILGILVGGI
                     CGLINGILVTRMKLPPFIATLGMMMVARGLALYVTNAAPVSGMPESFANLGNGALFKI
                     VEEGANGLPKVVFAGIPYPVIIMIFITVLFTFALSKLKVGRYLYAIGSNEEAARLSGI
                     KTNIVKIYAYVASGLLSGLTGVILASRLVTAQPNGGVSYELDAIASAVVGGTSLMGGV
                     GTIPGTLIGSFIIGVLRNGLNMNGVSSFVQMIVIGLVIIVAVSLDQLRQSKKAGKK"
     gene            11175..12122
                     /locus_tag="PXF40_002019"
     CDS             11175..12122
                     /locus_tag="PXF40_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5803327.1"
                     /translation="MKKSALFTATLFGLSTLFAGSAMAKSDEIAVIVKSANSTFWQNV
                     RKGAETAGKDIGGQYKVTFQGPEAETAIDAQVNMVDNAVNRGVAGIVLAASDPVALVP
                     AVKKAYESGIPVVLIDSGINSDGKYYQSFLATDNRAAGKLAAEKLLAKVKGGKVAVMS
                     FTQGAASAIERTGGFIDEIKAKADYKLVGPYYSDSDMTKALNQTEDVLGSNPDLAAIF
                     GANEPTAVGMARAVKQKGFAGKIVAVGFDGNSDLQNFVRDGTLDGIVVQSSYQMGYKG
                     VDTIGKLIKGEKVEKVIDTGVVYVTKENIDSEEAKGVLY"
     gene            12178..12429
                     /locus_tag="PXF40_002020"
     CDS             12178..12429
                     /locus_tag="PXF40_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIB"
                     /protein_id="HDL5803328.1"
                     /translation="MSNTLTDKALVVIAALGGRENIVDVYACITRLRVEVKNTDIVEW
                     DKIKSVGALGVVTSGSVIQSIFGSDAEAYRDEIKRILNI"
     gene            12558..13709
                     /gene="fucO"
                     /locus_tag="PXF40_002021"
     CDS             12558..13709
                     /gene="fucO"
                     /locus_tag="PXF40_002021"
                     /EC_number="1.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
                     /protein_id="HDL5803329.1"
                     /translation="MANRLILNETSYHGKGAIQNIVHEVTSRSFKKALVVTDKDLIKF
                     NVAQKVTALLDAAGLPYEIFDEVKANPAVDVIKAGVAKFKASSADYLIAIGGGSPIDS
                     AKAIGIIINNPEFSDVLSLEGVAPTHQKCVPIIAIPTTAGTAAEVTINYVITDEAKKR
                     KFVCVDVHDVPAVALVDPDMMESMPKSLAAATGMDALTHAIEGYITKAAWELTDALHL
                     KAIELIGRSLRGAVEKNPKDVEAMALGQYVAGMGFSNVGLGAVHSMAHPLSAYYDTPH
                     GIANAVLLPYVMEFNKNYTGEKYREIARAMGVKGVDEMSQEEYRNAAIAAVQQLSQDV
                     GIPPKLHQIGVKEADLAALSVDAFNDVCTGGNPRDCTAEELLEVYRIAY"
BASE COUNT         4118 a         2833 c         3007 g         3808 t
ORIGIN      
        1 aaagcagaca atgcttttaa ttatatctta ataggagcag attatgttta aagagaaagg
       61 ctatgatgaa ttcctagcag aaaaaattcg ccttggctta gaagatatgc aatcaggtaa
      121 tggtctttca ctcgatgaat caaaagcacg aaccaaacaa ctgattgaac gtaaagcaag
      181 agaactcgca aactttgaac aagagaatat catttatggc taaaacatta cgaattagca
      241 gtagagctca aaatgatatt gaagaaattt tagcgagcgt aattgaatat actggttttg
      301 aaagtagtgg aattcgctta caagaagata tttaccaaaa atttgagact atcgcttata
      361 tgccctctgc ggctggacgt ttaagagaag atggcacaag agaagcattc actaggcgtt
      421 atcgtattgt ttataccgaa ttagaaaatg aagtgtggat tattaccatt attcatagta
      481 gcagacttta tccacgcatt taaataacaa acgactaaaa tagtcggttt tttatttgca
      541 aaaaattaat aaaatatcac cgcttgtaag ctccataaaa aaaagcccga ttgtaacatc
      601 gggcgtttta gtctgaattt aagtcagatt agaatgtgta gttcacacct gcacggaatt
      661 cacgtccacg agctgataat tgaccacgct gaccgtgtgc gttgtatttt ttattcgcca
      721 cgttatccac tgcgaagttt acattcacgc tatcatcttt aagtggtttc cagtttaagg
      781 tgatatcagt tacattgtag ccgtctttgc ctgtaccggt atttgtttgt aatgttccgc
      841 ccgtaacgaa gaaattatct tcaggtttca ctttctcaac aatacggtgg tgtacgccaa
      901 cctctaaatt tggttgttca aagcgatagc ttaaagaagc tgtccaagta cgaccgatag
      961 ctgaggcgta ttctgggtta gtacttaata atggtttttc ttcccgctta ccagtttgtc
     1021 tgtttacttc ccaaatagtt ggtgagtaga aacgcggttt gctgtgtgca acaccaatac
     1081 gagcagtaaa accaccatta tggtaacctg catttaactc ataaccacgg tttttaattt
     1141 tacctaggtt cataattaac tcattattag gattatggct atcacgacca ccacctaatg
     1201 catcttttat atcttgccag aaatagctac catcaaaact gaatgtacca ttgttatagt
     1261 tgaaaccgat ttcagtatta cgagctttct ccgctttagt attgctacca atactaacga
     1321 tttttctatt tccgtgagcc gttagtgcat cgtataaacg agggctacga gttgcatagt
     1381 tgtggcttgc acttaagctt aaatgttcaa ttggctcata gataagccca acgcttgggc
     1441 tgaatgcacc attactacgc tctttaccat ccattgcttt gaatttgaag tggtcgtaac
     1501 gtacaccggt agttaaagtt actttatcta ctggagcagt aattgcttca acatacacgc
     1561 cggtatcggt tttctcttgg tttttcacaa gagggttaaa tttagtgtgt ggtttagctt
     1621 cttggtggcg atagttcaca ccgtatttta ataatacatt ttcgtgaagg gcagaatcaa
     1681 agtttacgtt tgcaccgtgg gttactattt tagttttggt tgcataatct acaccaccag
     1741 cataaccatt acctgtttca ttctcagacc aacgaccttg tactaactga tacacgttag
     1801 ctgttgcttc ttgagcaaaa cctaagtttt taccagtcca ttctaagtta gttctttgaa
     1861 ccgtaattct acggttagct ggagcttggc gttctacagt taagcggttg tacggagaaa
     1921 cctttgtgcc gttaggtgct acatcaaatt cttcacgcac taaacgctga ccttcatttc
     1981 gctcacttga atggcttaat acaaaacggt gatctcccaa tgttgcacct aatttagcta
     2041 aaaagctggt tttatctagt gcactatacg gaacacggtt tgtgccgaat tggtttacgt
     2101 aatctttacc gcctttatag tcgcgatctc tcacaagatt acctgagact aaagcatcaa
     2161 agatttcgcc tttaccatat aaggttgcat tgaaattgtg agcgtggttt gtgctgaagc
     2221 cagtacctaa ttttgcaccg aagtttttat cgctgttttt taataaatct aatgcatcaa
     2281 cggttttagc aattactgca ccattagttt gaccaatacc ggctgaagca ctgcctgcac
     2341 ctttttgtac agaaacaatt ttcaccaatg ccggatctaa catatgacga ccttggtgat
     2401 acaaaatttg gctatctgag taagtgttat ctacttttac atcaattgag ttttgaccca
     2461 taccacgaat atagagatat tgtgatgtac cgttaccacc acctaagcta attgccggct
     2521 catcttttaa taaaccacgc aaatcggttt gggtgctttc atcttttttc ttagttgtta
     2581 ccacattgct ttgtactttt aaaccttgat tatctgttac ggtaacagta tctaatacta
     2641 ctgcatctgt tgaagcagtt tgagccactg cattagcagc aagtacgctc aataccgcag
     2701 cagaaacagg gagcaatttg aagcttttca ttttatttat attccttagg taaattattt
     2761 aagaggatta tctgtttgat attaaaaata attctcaaca ccaaacgttc gcaaatttta
     2821 cagagataaa aatgattgtc aattagtctg aaatgaaatt tcacaaaata tattacaaat
     2881 tttacaaaaa gttccctaaa tttaaccgct tgcaacacaa aatgtgatcg ccttctaaaa
     2941 atcaaatttg cttgctcgac agtaacgcta caagcggtta aatttggaga aaaatttaca
     3001 aaaaggatag attatgcagc tgcgacacaa acagataatg gaatatatac aacagtttga
     3061 tgaagctaac gttcaagaat tggcggaaca ttgtggggtt tcgattgaaa ctatccgccg
     3121 agatttaaat aagctagata aagatggatt attacatcgc actcacggtg gagctgtgag
     3181 ccataaaaag cgagatattg gtcgctcatt taccacccga caacggctga acagtgaggc
     3241 gaaacgcagt atcgcagaaa atgtgttgga atatttacaa ccagaatcgg tgattgcttt
     3301 agatgccagc tcaacctctt ggaatgtggc acagcgtatt ccaaatattc cttgcaccgt
     3361 tgtcagcagt tcaatgcgga ttatctacag cctttcacac aaaccgcaca ttaaaacgat
     3421 tgccaccggt ggtatttatt ccgaaaaata cgatgccttc tatggtccat tatccgagca
     3481 gttactgacc cgtttaaaaa ttgatcttgc cattctttct tgtacaggca ttgccgatgg
     3541 ggcgatttgg gaatcaaatg aaattaatat ttcccttaaa cgtaaattaa ttgcgaacag
     3601 taaacaggtt tttttattag ccgatcacag taaatttgag cgtaaagact tgtttcgtat
     3661 cgaagattta tcttgcattg ataaattatt tatcaaccaa cccccaccgg actttctcaa
     3721 aaattattgc ttagcacatc aaattgaaat cattatttag tgatttctgc ccgattttat
     3781 tcagaaataa aacaaatcgg gcattctttt ttcactcatt tttaccaaaa tcccccattt
     3841 tttgtgatcg cactcacaaa atttaaacta aattcgcatt tttcttcata actcatattg
     3901 cgtatgcata ataaattcaa tcgcaaattt ttttaaccaa tcgggagaac tatttatgac
     3961 aacgttgaaa tctacccctg taaaaattgg tatccgccca accattgacg gtcgccgttt
     4021 aggagtgcgt gaatcacttg aagatcaaac aatgaatatg gcaaaagccg ttgcacaatt
     4081 aattcaatct gaagtccgcc acccaaatgg tgatttcgtt gaatgtgtga ttgctgattc
     4141 caccatcggt ggtgttgccg aagctgcggc ttgtgcagaa aaattcaaac gtgaaaatgt
     4201 cggagcggtg attaccgtaa ccccttgctg gtgctacggt tctgaaacca ttgatatgga
     4261 cccacatatg ccgaaagcca tttggggctt taacggaaca gaacgcccag gtgcagttta
     4321 tttagctgct gctttagcag gtcatagcca attaggttta ccggcattct ccatttatgg
     4381 cacagaagta caagaagctg acgatcaatc tattccagac gatgtgcgtg aaaaattact
     4441 ccactttgcc cgtgccggct tagcagtggc aaccttacga ggaaaatcat atttatctat
     4501 cggctctgtt tcaatgggta ttgccggttc tatcgtaaac caacaattct tccaagaata
     4561 tttgggtatg cgtaacgaat atgtggatat gaccgaaatt aaacgccgtt tagatcgcca
     4621 tatttacgat gccgaagaat ttaaattagc aatgagctgg gtgaaaacct attgcaaaga
     4681 aggtattgat gtcaacgcac cggaaaatca acgcagcccg gaagagcgtg aaaaactctg
     4741 ggaagacgtg gtgaaaatga ccattattgc ccgtgattta atggtgggta atcctcgctt
     4801 agcagagcta ggctatagtg aagaagcctt agggcataat gcgattgctg ccggtttcca
     4861 agggcaacgc caatggacag accatttgcc aaacggcgat tttatggaag ctaccttgaa
     4921 ttcgacctat gactggaacg gcgttcgcgc accatacatt atggcaactg aaaacgacag
     4981 cttaaatggc gtgaatatgt tgttcggtaa cttattaacc ggtcaggcac aaatctttgc
     5041 cgatgtgcgg acatactgga gcgaagactc ggtagaacgt gtcaccggct ggcgtccgga
     5101 aagcggtttt atccacttaa tcaactccgg ctctgcggcg ttagacggaa caggtcagca
     5161 taccgataga gcaggcaaac caactattaa accggcttgg gaagtgactg aagaagacgg
     5221 taaacgttgt ttagaaaaca cctgttggtg tccggcagtt cacgaatatt tccgtggtgg
     5281 tttatcttcc caattcttaa ccaaaggtgg aatgccgttt acgatgcacc gtatcaacct
     5341 gatcaaaggt atcgggccgg ttttacaaat tgccgaaggt tggtctatcg acttgccgga
     5401 aaatgtacac gacattttaa acaaacgcgc caatgaaacc tggccgacca cttggttcgt
     5461 acctcgctta accggaaaag gcgcatttac cgatgtgtat agcgtaatgg cgaactgggg
     5521 tgcaaaccac tgtgtggcaa ccttcggaca cgttggggca gacttaatta ccctcgcctc
     5581 aatgctccgc attccggttt gtgtgcacaa tgtggaagat aaagacgtat tccgcccaag
     5641 tgcgtggaac ggtttcggtc aagacaaaga aggtcaagac taccgtgctt gtgctaactt
     5701 cggaccatta tataaataat acacaatcac cctctcccct tgtgggagag ggacagccaa
     5761 gcaattcgtt cagaattgaa tggcagggag agggctacaa gcggtcgctt ttctctcaaa
     5821 atttacaaat ccctctctct gattaaattg ctaaacgcaa tttaatctat ctctctaaaa
     5881 gggagatatt aggataagta aaggagataa caatgccaat ttctcttatt ttcgactgtg
     5941 gtgccaccaa cctccgtacg attgcgatta atcaagcggg tgaaattgtg gcagcccatc
     6001 atctaccgaa taacacacaa ccagatgtgg aaagcccaga atttcatatt tgggatattg
     6061 aagagatctg gtcgaaatta atgacctgtg ccaaacagac gctttctcaa ctttcagaac
     6121 aacaacggca agagattgtt gggatttcag taaccacctt tggcgtggac ggtgcattat
     6181 ttgacaaaaa cggcaagcag ctttatccga tcatttcttg gaaatgcccg agaaccctac
     6241 cgattatgga aaaccttgcc aattatcttg atgttgaggc gttatatcaa cgtaatggcg
     6301 ttggacatta tagtttcaac accttattca aattattgtg gttaaaagag aacaaaccag
     6361 aaatttatca acaagctgag agtttcttat tcatctcatc tattttgact taccttctta
     6421 caggcgtgca aacaaccgac cgcacaatgg cgggaacgtc aatgatgaca aacatcgaaa
     6481 acgattcgtg ggataaaaca gttttagatt tattaggctt aaccgaaaac cattttcctc
     6541 caatgaaaag tgcaggagaa gttgtgggaa cattaaaagg agaaatttcc caagagttag
     6601 gtttaagcgg tcaaattcca gtaatttctt gcggacacga tactcaattt gccatttttg
     6661 gctcaggagc tggctataac caacctgtgt taagttcagg cacttgggaa attttaatgg
     6721 ttcgtacccc aaaagcaaaa ccacaatggc aattcgttca aaacggctta accattgagt
     6781 ttgatagcca atctggttat ttcaacccag gtgtgcagtg ggtagcttca ggtgtgatgg
     6841 agtggtttgg caaacgtttc ttctctgata tagccaatac tgaacattac taccgcacaa
     6901 tgattgaaga agcggcagaa gtgcctgctg gctcaaacgg tgtgaaatta gtcggcaatt
     6961 ttgatggcac aacagctaaa acaggttcaa ttatcggctt atctatgcac atcactcgtg
     7021 gcgaaattta ccgtgcaggc ttggaatata tggctcatcg tctaaaagaa gggttagatg
     7081 tattacaaga agtcggtcat tttaatgctg agagtttgat ttgtgtggga ggtggttcta
     7141 aaaacgcttt atggaatcaa attcgagccg atgtcttaaa tagaccgatt gatgtagtgg
     7201 atttccctga aagtaccgta ttaggcgcgg caatgtttac ttttacaggt gctggtgtat
     7261 ttgaaaatcc aaatgcggct caacaggcaa tgaagccaaa tgtgaaacgg gttgagccat
     7321 cgtcaaatag tcaattttat aaataaagtt tctcccctct ctctgatttg aggttcattc
     7381 agaacatcaa atcagagaga gggtaaaaaa ggagttcaaa atgttaaaag gtattcaccc
     7441 ggcaatttct ccagatttat taaaagtctt agccgaaatg gggcacggcg atgaattagt
     7501 gctttctgat gcacacttcc ctgctcactc tattcatcaa aacgtcattc gtgcagatgg
     7561 cttaagtgtt gccaccttat tagaaggcat ttctgctctg tttgaatttg accaatacgt
     7621 tgaagcccca cttgcaatga tgcaagcagt aaaaggcgac acgctcgatc caagcgttga
     7681 agagcgttac ctcaatgcaa ttaaaaaagt aaacggaaca gccccgaaaa tagagcgtgt
     7741 agaacgcttc gctttctatg atagagccaa aaacgcttat gccgttgtca ttacaggcga
     7801 gttagccaaa tacggcaaca ttattatcaa aaaaggcgta acaccggttt aattacaagc
     7861 ggttaaaaaa gcagaatttt ttacaaatat aaaattaaaa ggagttcaac aatggacaga
     7921 aaaatactgg cgagacaaat cattgatact tgtcttgaaa tgacccgaat tgggttaaat
     7981 caaggtacag caggcaatgt gagcgtacgt tataaagacg gtatgctcat tacgccaaca
     8041 ggtacacctt atgagcaaat gaccgaagat tctatcgtct ttgttgatgg caacggcaaa
     8101 cacgaagagg gaaaactccc ttcaagtgag tggcagttcc atttagcggt ttatgaggct
     8161 cgccctgaat taaatgcggt agttcacaac cacgctaaaa actgtgccgc agtgtctatt
     8221 ttaggtgaac ctatccctgc cattcactat atgatcgcct gcaccggcac taatcacatt
     8281 ccttgtgtac cttatgcccc gttcggcact caccaattag ccgactatgt acgtgaaggc
     8341 attaaacaca gcaaagcaat tttactcgct caccacggct taatcaccgc agataaaacc
     8401 ctcgaaaaag ccctcggcat cgcccacgag gtggaagtga tcgcagaatg gtatttgaaa
     8461 ctgctcgcta caggaaaacc tatcccaacg ctaaacaaag aacaaatgga tatcgtactc
     8521 ggaaaattta agtcctatgg ttcttgggtg gaaagcgaac aatagcctgc cataaataac
     8581 atacaagcgg tgatatttct taaaattttt acaaacggag tgcagtatgc aaaatgaagt
     8641 aatactcacg atgaaaaaca tcagtaaatc ctttgcgggg gtcaatgcgt taaaaggtgt
     8701 tgagcttacg ctgcgtaagg gcgaagttca cgcattaatg ggcgaaaacg gtgcaggtaa
     8761 atccaccttg atgaaatgct tgctgggcgt atatcaagcc gatgaaggtg aaatcatata
     8821 taaaggtcag cctgttcgct ttgagtcggt attagaggca caaaaagcgg gcattagtat
     8881 gattttccaa gaactgaacc tcattcccca tttaacggtg gcagagaata ttttcttcgc
     8941 ccgtgagcca ctcaaacacg gtttagtgga taaagacaaa atggtggaag aatcggctaa
     9001 attgctgaat ttctttgaga ttgatgttga tccaaacgat gaagtgagaa tgttgtcggt
     9061 agccaaacaa cagatggtag aaattgccaa agccctttca tttgatgtgg aagtactgat
     9121 tatggacgag ccgacctccg ctcttaccga aaaagagatc gataaattat ttgaattggt
     9181 cgatagactg cgtgccaaag gggtgagcat tgtctatatt tctcaccgaa tggaagaatt
     9241 aaaacgtatc tgtaaccata ttacgatttt ccgtgatggc acctatgtat ctaaccataa
     9301 attcaatgaa atcacgatgg atgagatcat taccaaaatg gttgggcgtt cattggataa
     9361 ccatttccca ccaaaaaccg ctgtggtgac aaacgacatt atcctctcga ttatgaatgc
     9421 tgaacgtaag ggagtgtttg aaccattgaa ctttgactta cgcaaaggag aaattctggg
     9481 cattaccggc ttggttggag caaaacgtac tgaactggct cgagccatct tcggagcaga
     9541 cccacttgat agcggtgaga tttttgtgca cgagaacaaa gtcagcatta aagatccgag
     9601 tgatgcaatt aaagccggta tagcctattt gtcggaagac cgtaagctca atggtgttgc
     9661 agtaagaatg tcgattcgtg agaatatcac gatggcatct atggataaag ttgccaatca
     9721 aataggtgtg atttcttacg atgaagaaga aaaagcctca aaaactttca tcgacaaaat
     9781 ggaaatcaaa accccaacga ttgagcagaa agttcaaaac ttaagtggtg gtaaccaaca
     9841 aaaagtggta attggtaaat ggttattccg tgaagcaaaa gtgatgattt ttgatgagcc
     9901 gactcgggga attgatgtcg gagcaaaata tgctatctat caactgctcg atgagcttgc
     9961 tgccaatggc gtgggtgtta tcgtgatctc ttccgaattg cctgaagtct tgggagtttc
    10021 cgaccgcatc attgtaatgc gtgaaggtag aatgacaggt atgctcgaga ctaaaaaaac
    10081 caaccaagaa gaaattatgc attatgcaac tggtgttaaa aatatgtttg ctcgtgaata
    10141 tggggtggaa aaatgaatga aaaacaaaaa gaaatgttaa gaaaaatggc tgcattggct
    10201 ggcttagtac tattaatcat ctttttcagc gtaaccaatg aatacttctt tacctccaat
    10261 aacattatga cagtagggct acaaacctct accattgcgt taattggtat tggggcaacc
    10321 tgtgtgatct taaccggtgg aattgattta agtaccggtt cagtagttgc actctccggt
    10381 gtggcagctg caatgattgt aaatgccggt gtacccgtac cactaggaat gattttaggg
    10441 attttggtcg gcggtatttg tggcttaatc aacggcattt tagtcaccag aatgaaattg
    10501 cctccgttta ttgctaccct cggtatgatg atggttgccc gtggtttagc attgtatgtt
    10561 accaatgccg caccagtttc cggaatgcct gaatcctttg ccaatctcgg taacggagca
    10621 ttatttaaaa ttgtggaaga aggggcaaac ggcttgccga aagtggtatt tgcaggtatt
    10681 ccttaccctg tgattattat gatctttatt accgtactat tcactttcgc tctctctaaa
    10741 ctgaaagtcg gacgctatct ttacgcaatt ggttctaacg aagaagccgc acgcttatcc
    10801 ggcattaaaa ccaatattgt caaaatctat gcctatgttg ccagtggctt actctctggt
    10861 ttaactggcg ttatccttgc ctcccgcctc gtcaccgccc agccaaacgg tggggtctct
    10921 tacgagctgg atgcgattgc cagtgctgtg gtgggcggca catcgcttat gggcggtgtg
    10981 ggtactatcc ccggcacact catcgggtca ttcattatcg gggtactccg taatggtttg
    11041 aatatgaatg gcgtttcttc atttgttcaa atgattgtca tcgggcttgt gattatcgtg
    11101 gcggtctctc tcgaccagct ccgccaatcc aaaaaagccg gtaaaaaata atccactctt
    11161 aaaggagaat taaaatgaaa aaatcagcat tatttactgc gaccctcttt ggtttatcga
    11221 ccttatttgc aggcagtgca atggcaaaat ctgatgaaat cgctgtgatt gtgaaatctg
    11281 ccaactctac cttctggcaa aacgtgcgta aaggggctga aactgccggc aaagatattg
    11341 gaggacaata caaagtcacc ttccaagggc cggaagccga aacagcgatt gacgcccaag
    11401 tgaatatggt ggacaacgcc gtaaaccgtg gcgtggcagg catcgtactg gctgcctcag
    11461 acccggtagc attagtgccg gcggtgaaaa aagcttatga gagtggcatt ccggtggtgc
    11521 ttatcgattc cggcatcaac agtgacggca aatactacca atctttcctt gccaccgaca
    11581 accgtgcagc aggtaaatta gcagcggaaa aactgcttgc caaagtcaaa ggcggcaaag
    11641 tggcagtgat gagctttacc caaggggcag catcagcgat tgagcgtacc ggtggtttta
    11701 ttgacgaaat caaagcaaaa gccgattaca aactggtcgg cccgtactac tccgattcgg
    11761 atatgaccaa agcgttaaac caaaccgaag acgtattagg ttctaaccct gatcttgcag
    11821 cgatcttcgg ggcgaacgaa ccgactgcgg taggaatggc acgagcggtg aaacaaaaag
    11881 gctttgccgg caaaattgta gcggtgggct ttgatggaaa ctccgaccta caaaacttcg
    11941 tgcgtgacgg aacactagac ggcatcgtgg tgcaatcttc ctaccaaatg ggctataaag
    12001 gcgtggacac catcggcaag ctgattaaag gcgagaaagt cgaaaaagtg attgataccg
    12061 gggtggttta tgtcacgaaa gaaaacattg atagcgaaga agcgaaaggt gttctttact
    12121 aacattcaag ttaaacgggg tggggttgcc caccctttca gccgaaagga agccaatatg
    12181 tcaaataccc ttaccgataa agccttagtg gtgattgccg cacttggcgg tcgagaaaat
    12241 attgtcgatg tttacgcctg tattacccgc ctacgtgtgg aggtgaaaaa taccgacatt
    12301 gtggaatggg ataaaattaa atctgtcggt gcgttaggcg ttgtgacctc aggctcagtt
    12361 attcaatcta tttttggtag cgatgccgaa gcctaccgtg atgaaatcaa acgtattttg
    12421 aatatttagc ctaagcacac tcacaacaaa agaatcgcaa caagcggtga aatttttatc
    12481 aaaatttgca aaaaaatgac gtaatttgac cgcttgcaag ttaatcgaat tgtttaactt
    12541 ttaagaagga aaatagtatg gcaaatcgtc ttatcctcaa tgaaaccagt taccacggca
    12601 aaggagcaat ccaaaatatt gttcacgaag tgaccagccg gagtttcaaa aaagcccttg
    12661 tggtaacaga caaagacctg atcaaattta acgttgccca aaaagtcacc gccttgcttg
    12721 atgccgcagg cttgccttat gagattttcg atgaggtcaa agccaacccg gcagtcgatg
    12781 tgatcaaagc gggggtcgca aaattcaaag cctccagtgc cgattattta attgcgattg
    12841 gtggcggctc accgattgat agtgccaaag cgattggtat tatcatcaat aaccctgagt
    12901 ttagcgatgt actttcattg gaaggtgtcg ccccaaccca ccaaaaatgt gtgccgatta
    12961 tcgccattcc aactaccgca ggtacagccg cagaagtcac gattaactat gtcattaccg
    13021 atgaagcgaa aaaacgcaaa tttgtgtgcg tggacgttca cgatgtgccg gcagtggcgt
    13081 tagtcgatcc agatatgatg gaatctatgc cgaaaagctt ggctgccgca accggtatgg
    13141 acgctctcac ccacgccatt gaaggctaca ttaccaaagc ggcgtgggaa ttaaccgatg
    13201 ctctacacct taaagcgatt gagctgatcg gccgttcatt gcgtggtgca gtggagaaaa
    13261 atccgaaaga tgtcgaggca atggcattgg gacaatatgt ggctggaatg ggcttctcca
    13321 acgttgggct tggcgcggtt cacagtatgg cacacccgct ttctgcctat tacgacaccc
    13381 cacacggcat tgccaacgca gtattactgc cgtatgtgat ggaatttaat aaaaattaca
    13441 ccggcgaaaa ataccgtgaa attgcccgag caatgggggt aaaaggcgta gatgaaatga
    13501 gccaagaaga gtaccgcaac gccgccattg ctgccgtaca acagctttca caagatgtcg
    13561 gcattccgcc aaaactgcat caaatcggcg ttaaagaagc cgatttagcg gcattatcgg
    13621 tcgatgcctt taatgatgtc tgcaccggtg gcaacccgag agattgtacg gctgaggagc
    13681 tgttggaggt atatcggatc gcatactaag ttctatcttt gttaaataga caagcggtga
    13741 ttttttaata aaaatttgca atttct
//
LOCUS       DANMCL010000077        13693 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.077, whole genome shotgun sequence.
ACCESSION   DANMCL010000077 DANMCL010000000
VERSION     DANMCL010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13693
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.077"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            58..1011
                     /locus_tag="PXF40_002022"
     CDS             58..1011
                     /locus_tag="PXF40_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803330.1"
                     /translation="MEIILRLLWRRLMALPVMILGVTALVFIVLQFTPGDPATVALGE
                     SASEAAKEIYREQHGLNDPLLVQYFRFLGNLFVLDFGMTTPPEQPIVDMIAKAFPLTL
                     QLTFIGVFLAAIVSFTLGVTAALYRDTWIDQLIRLISVAAVATPSFWLGILLIQYFSL
                     KLDWLPSGGFIPFSEDPKGYVNSMVLPSLALAVPVCASLIRVVRTTMVEEMDKDYVRT
                     AIGNGVPYSTVIRHNVLRNALITPVTVLGLRVGYLLGGAVVIEQIFDLPGMGKLIFNG
                     IVNHDLNLVQGVVLTIAFTFVLVNIIVDILYLLINPKIRSL"
     gene            1013..2983
                     /locus_tag="PXF40_002023"
     CDS             1013..2983
                     /locus_tag="PXF40_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HDL5803331.1"
                     /translation="MFRQGLAARLASGGARFRALSTSSKIALLFIVFIALVAIFAPLV
                     APYDPLQTLRPVQAPSGDYLFGTDRLGRDIFSRMVWGARTSLFIGLGAVGVAILFGSI
                     LGATAATADKFGNEVIMRFMDILMAFPGIALAAVLLATFGNSVPVIIVTIAVVYTPQL
                     ARVVRANVVSQWEEDYVRAERVIGGSRTYILLKHVVRNTAAPVLVFATVMVADAIVFE
                     ASLSFLGAGVQPPFPSWGNILSEGRNLVLSGFWWATTFAGIMILLTVLALNILAEGLT
                     DALVNPKLKRSTQSKEDVAKPLATDVQEAMSETLALKRYLLKLHEKETTRTDRMQLNS
                     TAKPILQVKNLSIRFPNRYGETPLVDNISFTVHEGETMGLVGESGCGKSITAFSIMGL
                     LPKTAKITGEILFTDRSGKQHNLLESADLNALRGHEISMIYQDALSALNPSMRIKDQM
                     AQLISRGGKQSAETLLQWVKLDPEKTLNRYPHELSGGQRQRVLIAMALAREPKLLIAD
                     EPTTALDVTVQAEVIKLLNELREKLGFAMVFVSHDLALVAQIAHHITVMYAGQVVETA
                     PTTPLLANPTHEYTRGLLGSVLSTELRAERLYQIPGSVPSPFDFAKGDRFASRSLRPD
                     ANPEQHLKLVPTGDHPQHFWASHLEDPQSKEA"
     gene            2998..3804
                     /locus_tag="PXF40_002024"
     CDS             2998..3804
                     /locus_tag="PXF40_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803332.1"
                     /translation="MSMKFIKEQPIIELSNIVVQFASRDGTLFNPKKFTAVNDVSLAI
                     HAGETVGLVGQSGCGKSTLASVMIGLQKPTSGTVKFNGLEMKYGSAEARKYFGSQVSV
                     IFQDPATALNPRMRVLDILKDPMDIHNILQPQEREKRVYDLLSRVGLPRSAALVEPTR
                     LSGGQKQRVAIARALALNPKLIVADEPTSALDVSVRAQVLNLLADLKKELNLAMVFIS
                     HDLQTVHQVSDRIVVMNGGKIVEMGDASDVFERPTQEYTRTLIEAAPSLL"
     gene            3867..5453
                     /locus_tag="PXF40_002025"
     CDS             3867..5453
                     /locus_tag="PXF40_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HDL5803333.1"
                     /translation="MIQITQTINIDLLIVGSGIAGLSAAVEAKEKGINTLLISKSTIG
                     SGASYFPLKATLGIQVTGDEADKIHFKEDIENIGKGKINPNVVQAYIEDSPQAIELLH
                     RIGFQPWKRNDNRPACFAKYPRPIYLIKDWRESALRAKQILQEQHIAFYENATLLHIV
                     TDNNQVQGAVFSLTTSGQISYIFCKTKHLILAAGGIAGLYKDNLYPADVIGSLHYVAQ
                     QAGATLVNLAFIQFIPAFVEPKYKVLFGEHTLKYVTQITDSKGNNLFPHLNAEQFAKM
                     VLERSHYAPFSLDFAGVEFDLVMMKHLLENPHEKGIYLKYSPKLYEDTEEFYTVYLNW
                     LKNEVGIDLVQDKIAIKPFAHSCNGGIQINQWGESAVKGLFAIGEISHCIEGANRMGG
                     NSVGGGLVFAKRAVSEIVRSLEQNDLQKNSEISPLAMAEKALNQLANSTANLELTASE
                     VLSTIREKMALYANVYRTRSNLKLLLEELNRLEQEFDPIYHAQYQGIEIYNALKTAQL
                     VVNQMLNEQSLGAHYLDEQN"
     gene            5499..6881
                     /gene="nhaC"
                     /locus_tag="PXF40_002026"
     CDS             5499..6881
                     /gene="nhaC"
                     /locus_tag="PXF40_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5803334.1"
                     /translation="MNNYLLKLKPMTAVILSLLTVFILGFTMIGLGWVPQISILAVIV
                     MLLLFGLINKIPFKNMQEGMASGLMSSIGAVYLFFFIGLLVSALMMSGAIPTLMYYGL
                     SVISPELFYISAFALSSVVGIALGSSLTTTATIGVAFIGMASAFGANPAIVAGAVVSG
                     AFFGDKTSPLSDTTTIAASVVGIDMFAHIRNMLYTTIPAWILTALFLWFLTEPTDAQN
                     LANIENLKTNLQETGLIHGYSLLPFVTLILMAIKRVNSIYIIVTTVTLSLIITYIHSS
                     PTLEQLGNYFFTSYKPVEGVDLGEVASLVSRGGINSMFFTITIVLLALSLGGLLQILG
                     ILPALLNGISGFLTSTGRVTLVVASTAVGINVLIGEQYLSLLLSGNTFRSTYERLGLE
                     VKNLSRTIEDAGTVINPLVPWGVCGVFISSVLNVPVLDYLPYAFFCYICLILTLIFGF
                     TGVTISKKAN"
     gene            complement(6924..8120)
                     /gene="ispC"
                     /locus_tag="PXF40_002027"
     CDS             complement(6924..8120)
                     /gene="ispC"
                     /locus_tag="PXF40_002027"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HDL5803335.1"
                     /translation="MKKLVILGSTGSIGKSTLSVVEHNPNPNQYEVFALVGGKNVELM
                     LEQCRQYQPTFAAMDDEKSAQALKTALATLGSKTEVLAGQAAICELAAHSEVDMVMAA
                     IVGAAGLLPTLSAVKAGKTVLLANKESLVTCGQIFIDEARKSGAKLLPVDSEHNAIFQ
                     SLPPEAQQKVGFCPLAELGVSKIILTGSGGPFRTKPLNEFDAITPAQAVAHPNWSMGK
                     KISVDSATMMNKGLEYIEARWLFNATAEEMDIIIHPQSIIHSMVRYIDGSVIAQMGNP
                     DMCTPIAHTMAYPNRINAGVPPLDFFKLKELTFIEPDFARYPNLKLAIEAFAEGQYAT
                     TAMNAANEIAVEAFLNEQIRFTDIVNVNRTVVENIAPIQVSEIADVLHIDKLARELAK
                     QAVLQL"
     gene            complement(8239..10437)
                     /gene="relA"
                     /locus_tag="PXF40_002028"
     CDS             complement(8239..10437)
                     /gene="relA"
                     /locus_tag="PXF40_002028"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP diphosphokinase"
                     /protein_id="HDL5803336.1"
                     /translation="MVAIRYSHQLEPNNFELSSWCASLNMSPVTFEQIHNAWSYAQEK
                     LDTDYSLMWYGIEMVEVLHGLNMDDDSLVAAMLFPLVKHNVIDLVQLKEDFSNDIKNL
                     VKGVLEMENIRQLSANNVSDLQIDNIRRMLLAMVDDFRCVVIKLAERIAYLRDSNHHS
                     EEDTVLAAKECSHVYAPLANRLGIGQLKWELEDYCFRILHPVSYTQIAKFELGERRVD
                     RERYIANFVADLTACLSPEIKNVQIYGRPKHIYSIWKKMQKKRLRFNQLFDIRAVRVI
                     VPTLEDCYTALGIIHTKYTHLPEHFDDYIANPKPNGYQSIHTVVLGEGEKTIEVQIRT
                     QQMHDDAELGVAAHWKYKEGATAGRSGYEEKIVWLRKLLEWQNDLADSGDMVAEMRSQ
                     IFDDRVYVFTPRGEVIDLPQKATPLDFAYAIHSEIGHRCIGAKVAGRIVPFTYHLQMG
                     DQVEIITQKEPNPSRDWLNPNTGFVNTGKARSKIIAWFKKLDREKNIPIGKEALEAEM
                     EKFGFTLKQIEEYALPRYNLKQFDDLYAGIGGGDIRLHQLMHFLQSKLIKPTAEQEDE
                     AVLKQVNKNTNQPKPSKGYVIVEGVGNLMHSIARCCQPIPGDEIVGYITQGRGISIHR
                     ADCEQLFELQSLNPERVVEADWGEGYTSGLSLTIRVIANDRNGLLRDVSAIMANEKVN
                     VLGVSSRTDVKRSLATIDMEIQLNNVEILNKLLARIAQLDDVIEAKRLSS"
     gene            10691..11998
                     /locus_tag="PXF40_002029"
     CDS             10691..11998
                     /locus_tag="PXF40_002029"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HDL5803337.1"
                     /translation="MTILALGINHKTASVGLREKVAFVDDKRKLALEQIQTSGLAESV
                     VILSTCNRTELYFHQPNISPREESEENIQWREQCFRWFAQIHQLDESELRECLYFKQN
                     LEAANHLMKVASGLDSLILGEPQILGQVKQAYQYSEDFYQHQQKAMSTKLSRLFQRTF
                     ATAKRVRSETEIGSQAVSVAYAACGLARQIFDNFGKLRFLLVGAGETIELVARYLIQH
                     GAKNIMLANRTHIRAEMLAEKLNAPMQILSLSALQLGLNQADVVISSTGSPDTLISKE
                     MVEIAQKQRQFDPLLLIDIAVPRDIDEKAGDLEGVYAYSVDDLQNIIQRNMAQREEAA
                     KQAAEIVKEESKAFFEWLKQQQSSDLIKRYRQDAEQTRQELLEKALQAISQGQDSQKV
                     LSELSYKLTNQLLHAPTQALQAMAKSGNSTGLQSFSRALRLEE"
     gene            12183..>13693
                     /gene="der"
                     /locus_tag="PXF40_002030"
     CDS             12183..>13693
                     /gene="der"
                     /locus_tag="PXF40_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005614634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HDL5803338.1"
                     /translation="MTPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGH
                     ANIAGYDFIVIDTGGIDGTEEGVEEKMAEQSLLAIEEADVVLFLVDARAGLLPADVGI
                     AQYLRQREKTTVVVANKTDGIDADSHCAEFYQLGLGEVEQIAAAQGRGVTQLIEQVLA
                     PLGEQLNAEQFNQEQAGENAKNVANEETDEWDTEFDFENEEDAALLDEALAEEAEESI
                     EDKNIKIAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYIPMERDGQQYTIID
                     TAGVRKRGKVNLAVEKFSVIKTLQAIQDANVVLLTIEAREGISDQDLSLLGFILNAGR
                     SLVIVVNKWDGLSQDIKDQVKSELDRRLDFIDFARVHFISALHGSGVGNLFDSVKEAY
                     ACATQKTSTSMLTRILRMAADEHQPPLVNGRRVKLKYAHPGGYNPPIIVIHGNQVEKL
                     ADSYKRYLSNYFRKSLKIIGSPIRILFQEGNNPFAGKKNKLTPSQLRKRKRLM"
BASE COUNT         3904 a         2953 c         2822 g         4014 t
ORIGIN      
        1 gcttgtaggt aaacttagat ttaattttgg agtgtaacta cactcaagga gaagaaaatg
       61 gaaattatac tccgattatt atggcgtcgc ctaatggctc tgccggtaat gatcttaggc
      121 gtaactgcct tggtatttat tgttttacaa ttcacccccg gagatccggc aaccgttgct
      181 ctcggtgaaa gcgccagcga agccgctaaa gaaatctatc gtgaacaaca tgggttaaat
      241 gatccattgc ttgtacaata ttttcgcttt ttagggaatt tattcgtatt agatttcggt
      301 atgacaaccc ctccagaaca gcctattgtt gatatgattg ctaaagcatt ccctttaaca
      361 ttacagctta cctttattgg ggtcttctta gctgctatcg tctctttcac attaggtgta
      421 acggcagcac tttaccgtga tacttggatt gatcaattaa tccgtttaat ctcggttgcc
      481 gctgttgcca caccttcttt ctggttgggt attttattga ttcaatactt ctccttaaaa
      541 ttagattggt tgccttcagg cggttttatt ccatttagcg aagatccaaa aggctatgta
      601 aactcaatgg ttctcccttc actcgcttta gctgttcctg tatgtgcctc attgatccgt
      661 gtcgtgcgta caacaatggt agaagaaatg gataaagatt atgttcgaac agccatcggt
      721 aatggtgtac cttactcaac ggtgattcgc cacaacgtgc ttcgtaatgc cttaattact
      781 ccggtaacag tattaggttt acgggttggt tatttattag gtggtgcagt tgtgattgaa
      841 cagatcttcg acttaccggg aatgggtaaa ttaattttca acggtatcgt caatcacgac
      901 ttgaacttag tgcaaggtgt agtattaact atcgcattta ctttcgtgtt ggtgaatatc
      961 attgttgata ttctttactt gctcattaat ccaaaaattc ggagtttata atatgtttcg
     1021 ccaaggatta gctgctcgac ttgcttcagg cggtgcaaga tttagagcat tatcaaccag
     1081 ctcaaaaatc gccttactct ttattgtatt tatcgcatta gtcgctattt ttgcaccatt
     1141 agtagcgcct tatgacccac tgcaaacgct acgtccagtg caagctccaa gcggtgatta
     1201 tttattcggt acagaccgtt taggacgtga tattttctcg cgtatggtat ggggagcaag
     1261 aacatctctc tttatcggtt taggtgcggt aggcgttgcg attctattcg gtagtatttt
     1321 aggggcaact gcggcaaccg ccgataaatt cggtaacgaa gtgattatgc gttttatgga
     1381 tatcttaatg gcattcccgg gtatcgcatt agctgctgta ttacttgcca ctttcggtaa
     1441 ctctgtacct gtgattatcg tgactattgc ggttgtttac actccccaac ttgcccgagt
     1501 ggtgcgtgct aacgtagtat ctcaatggga agaagattat gtgcgtgccg agcgtgtaat
     1561 tggtggtagc cgtacttata ttctattaaa acacgttgtg cgtaatactg ctgcaccggt
     1621 tttagtattc gcaacagtga tggttgctga tgccatcgta tttgaagcat cactttcatt
     1681 cttaggtgca ggtgtccagc ctccattccc atcttgggga aatatcttat ctgaaggtcg
     1741 taaccttgta ttaagtggct tctggtgggc tacaactttc gcagggatta tgattttatt
     1801 aaccgtactt gcgttaaata tccttgctga aggcttaacc gatgcgttag taaatccaaa
     1861 actaaaacgt tcaactcaaa gtaaagaaga tgtcgcaaaa ccattggcaa cagacgttca
     1921 agaagcaatg tctgaaactc ttgcgttaaa acgttactta ctcaaattac acgagaaaga
     1981 aacgacccgt actgaccgta tgcaattaaa ctcaacggcc aaaccgattt tacaagtgaa
     2041 aaacttatca atccgtttcc caaatcgtta tggtgaaact ccgcttgttg ataatatcag
     2101 ctttactgtt cacgaaggcg aaaccatggg cttagtgggt gaatctggtt gtggtaaatc
     2161 aatcaccgca ttctcaatta tgggtttatt accaaaaact gcaaaaatca ctggtgaaat
     2221 cctctttacc gaccgttcag gtaaacaaca caatctttta gaatcagccg atttaaatgc
     2281 ccttcgtggt cacgaaatct cgatgattta ccaagatgca ttaagtgcgt taaacccatc
     2341 aatgcgtatt aaagaccaaa tggcacaatt aatcagccgt ggtggtaaac aatcagcaga
     2401 aacattattg caatgggtaa aacttgaccc ggaaaaaacg ctcaaccgtt atcctcacga
     2461 gttatctgga ggacaacgtc agcgtgtatt aattgcaatg gcacttgctc gtgaaccgaa
     2521 actattgatt gctgatgaac caacaacagc attagacgta accgttcaag ctgaagtgat
     2581 caaattatta aacgaattac gtgagaaact tggatttgca atggtattcg tgagccacga
     2641 cttagcttta gtggcacaaa tcgctcacca catcacggta atgtatgctg gtcaagtggt
     2701 tgaaactgca ccaactacgc cattattggc aaacccaaca cacgaataca cacgtggatt
     2761 attaggctcg gtactttcta ccgaattgcg tgcagaacgc ctataccaaa ttccgggcag
     2821 tgtgccttca ccatttgatt ttgcgaaagg tgaccgtttt gcgagtcgtt cattaagacc
     2881 agatgcaaac cctgaacagc acttgaaatt agtgccaacc ggtgatcacc cacaacactt
     2941 ctgggcttca cacttagaag atccacaatc taaagaagca taaaggagag caatacgatg
     3001 agtatgaaat ttatcaaaga acagccaatt attgaactgt ctaatattgt tgtgcaattt
     3061 gcttctcgtg acggcacctt atttaacccg aaaaaattca cggcggtaaa tgatgtcagc
     3121 ctagcaattc acgccggtga aacagtcggt ctggttggac aatctggttg tggcaaatct
     3181 actttagcca gtgtgatgat cgggcttcaa aaaccaacct ccggcacagt aaaatttaac
     3241 ggcttagaga tgaaatatgg cagtgcggaa gctcgcaaat atttcggtag ccaagtgtca
     3301 gtaattttcc aagacccggc aaccgcccta aatccgcgta tgcgtgtgtt ggatatttta
     3361 aaagatccga tggatattca taatatctta caaccgcaag aacgtgagaa gcgggtttat
     3421 gatttgctct ctcgagtcgg tctacctcgt tcagcggcgt tggtcgagcc aacccgatta
     3481 tctggtgggc aaaagcaacg tgtagcgatt gctcgtgcat tggcattaaa tccgaagctg
     3541 attgtggctg atgaaccaac ctctgcactt gacgtatcgg ttcgagctca agtactgaac
     3601 ctgctggcag acttgaaaaa agaactcaat ttagcgatgg tatttatctc tcacgactta
     3661 caaaccgttc accaagtttc agaccgcatt gtggttatga acggcggtaa aattgtggaa
     3721 atgggcgatg cttcagacgt atttgaacgc ccaacgcaag agtacacccg aaccttaatt
     3781 gaagcagcac catctttatt ataattgtgc tttgtgccta caagcggtaa aatttttcgc
     3841 aaattttacc gcttgtgttt ttatttatga tccaaattac ccaaaccatt aacattgatt
     3901 tattaattgt cggctctggc atcgctgggc tttctgctgc agttgaggca aaagaaaaag
     3961 gcattaatac cttactgatt agcaaatcta cgattggctc gggagcgagc tactttccgc
     4021 ttaaggcaac acttggcatt caagtaaccg gcgatgaagc cgataaaatt cactttaaag
     4081 aagatattga aaacatcggc aaaggcaaaa tcaaccctaa tgtggtacaa gcctatatcg
     4141 aagattcacc acaagcgatt gaactactcc accgtatcgg ctttcagcct tggaagcgta
     4201 acgacaaccg tccggcttgt tttgccaaat accctcgccc aatttattta attaaagatt
     4261 ggcgggaatc tgccctacga gcgaaacaga ttttgcaaga gcaacacatt gctttctatg
     4321 aaaatgctac ccttttacac atcgtcacag acaataacca agtgcaaggt gcggtatttt
     4381 cgctcactac aagcggtcaa atttcctata ttttttgcaa aaccaagcat cttattttag
     4441 ccgcaggcgg gattgctggg ctgtataaag ataatctcta cccggctgat gttatcggtt
     4501 cacttcatta tgtggcacaa caagccgggg caaccttggt taatcttgcc tttattcagt
     4561 tcattcctgc ctttgtcgag ccaaaataca aggtgctatt tggcgaacat acattgaaat
     4621 atgtcaccca aatcaccgat tctaagggta acaatctatt tccacactta aatgccgagc
     4681 aatttgcaaa aatggtgctg gaacgtagcc attatgctcc tttcagcctt gattttgccg
     4741 gcgtggagtt cgatttagtg atgatgaaac atttgcttga aaaccctcac gaaaaaggca
     4801 tttaccttaa atacagcccc aaactgtatg aagacacgga agagttttat accgtctatt
     4861 tgaattggct caaaaatgaa gtcgggattg atttagtgca agataagatt gcaatcaagc
     4921 cgtttgctca tagctgtaac ggcggcattc aaattaatca atggggcgaa agtgcagtaa
     4981 aagggctatt tgcgattggt gagatttctc actgcattga aggggcaaac cgtatgggtg
     5041 gtaactcagt cggcggtggc ttagtgtttg ccaaacgtgc ggtatcggaa attgttcgtt
     5101 cgctagaaca gaatgatttg caaaaaaaca gcgaaatctc accgcttgca atggcagaaa
     5161 aagcattaaa tcagcttgct aattcaactg ctaatctaga actaactgcc agtgaagtgc
     5221 tttctactat tcgagagaaa atggcgttat acgccaatgt gtaccgcact cggagcaacc
     5281 tcaaactact acttgaggaa ttaaaccgtt tggaacaaga atttgaccca atctatcacg
     5341 ctcaatatca aggcattgaa atttacaatg cgttaaaaac cgctcaatta gtggtcaatc
     5401 aaatgctaaa tgagcagagt ttaggcgcgc actacttaga tgaacaaaat tagtctataa
     5461 tagccaactt atttaaaaat aataaattag gagtataaat gaataactac ctacttaaat
     5521 taaaaccaat gacagcggtc atactttcgc ttttgacggt ctttatctta ggttttacaa
     5581 tgattgggct tggctgggtg cctcaaattt caattctagc cgtgattgta atgctgctac
     5641 ttttcggctt aatcaataaa attccgttta aaaatatgca agagggtatg gcaagcgggc
     5701 tgatgtccag tattggtgcg gtttacctat tcttttttat tggattattg gtttcagctt
     5761 tgatgatgtc tggtgcgatt ccaaccttaa tgtattatgg cttaagtgtg atttcacctg
     5821 aattatttta catttctgca ttcgcattaa gttctgtagt aggtattgcg ttaggcagta
     5881 gtttaaccac aaccgccacc atcggtgttg cttttatcgg tatggcttct gctttcggtg
     5941 cgaaccctgc gattgtagca ggtgcggtgg tttcaggggc gttttttggc gataaaacct
     6001 ctccactttc agacactact accattgctg cttccgtagt gggcattgat atgttcgctc
     6061 atatccgtaa tatgctttat accaccatcc ctgcgtggat tttaacagca ttattccttt
     6121 ggtttttaac cgaacctact gatgcacaaa atttagcaaa tatagagaac ctaaaaacca
     6181 atttgcaaga aacaggatta atacacggct actctttgct accttttgtt acgttaattt
     6241 taatggcaat taagcgtgtt aattcaattt atattattgt aactacagta acactctcgc
     6301 taattattac ctatatccac agttcgccaa cccttgaaca gctagggaat tatttcttta
     6361 ccagctataa acctgttgaa ggcgtagatt taggcgaagt ggcatcatta gtctctcgtg
     6421 gtggcattaa tagtatgttc tttaccatca ctattgtatt gcttgcgtta agtttaggtg
     6481 gtcttttaca aatcctcggc attttaccgg cactacttaa cggcattagc ggctttttaa
     6541 ccagcacagg acgtgttact cttgtagttg ccagcactgc ggtgggaatt aacgtcttaa
     6601 tcggtgagca atatttgagc ttattgttat caggtaatac tttccgctca acttatgaac
     6661 gtttaggctt agaagtgaaa aacttatctc gcaccattga agatgcaggc acggtaatca
     6721 acccattagt cccttggggc gtgtgcggtg tgtttatcag tagcgtatta aatgtaccgg
     6781 tgttagatta tctaccatac gcattcttct gttatatctg tttaatcctt accttaattt
     6841 ttggatttac cggggtaaca atcagtaaaa aagctaacta atatgtgaaa aatgcctaca
     6901 aatttgtagg cattttcttt tcattagagc tgaagaacag cttgtttggc taactctctg
     6961 gcgagtttat caatatgcaa tacatcagca atttcactga cttgaattgg agcaatattt
     7021 tccaccaccg ttctattcac gttcacaata tccgtaaagc ggatttgctc gtttaaaaac
     7081 gcctcaacgg caatttcatt ggcggcattc atcgctgttg tcgcatactg tccttctgca
     7141 aaagcctcaa tcgctaattt taagttcggg taacgggcaa aatccggctc gataaaggtt
     7201 agctctttta atttaaagaa atctaatggt ggcacaccag cattaattcg gtttggatat
     7261 gccatcgtgt gagcaatcgg cgtacacata tccgggttgc ccatttgagc aatcaccgag
     7321 ccatcaatat aacgcaccat cgaatgaata attgattgtg ggtgaatgat gatatccatt
     7381 tcctcggctg ttgcattaaa caaccagcgg gcttcaatat actccaagcc tttgttcatc
     7441 attgtggctg aatcgactga aattttctta cccatagacc aattggggtg agcaactgct
     7501 tgagccggtg taatcgcatc aaattcattt aatggcttag tacggaacgg tccacccgat
     7561 cctgttaaaa taattttact gacacccagt tcagcgagtg gacaaaaccc gactttttgc
     7621 tgtgcctccg gtggaagcga ttggaaaatc gcattgtgtt cactatctac cggtaagagc
     7681 ttcgcaccgg atttacgagc ctcatcaata aaaatttgcc cacaggttac cagcgattct
     7741 ttatttgcca acaatacggt tttacccgct ttcaccgcag aaagtgtcgg taataaccct
     7801 gctgctccta caatagcagc cattaccata tccacttcgg aatgtgcagc aagctcacaa
     7861 atagctgctt gaccggctaa cacttcagtt ttagacccca aagttgccaa tgccgttttt
     7921 aatgcttgtg cggatttttc atcatccatt gccgcaaaag tcggctgata ttgacgacat
     7981 tgctccagca ttaattcaac attctttcca ccaactaacg caaacacctc atattggttt
     8041 gggtttgggt tatgctcaac taccgataaa gtgcttttac cgatagaacc tgttgaacct
     8101 aaaatcacta attttttcat tttgtttctc tttatctaat gactgataag ggcgaaagat
     8161 ttttcgcccc tacgccgtaa ttatgcggat actcattcgt tgtttgtaaa ttgtttagca
     8221 aaaacaaccg cttgtagatt aactcgaaag ccgttttgct tcgataacat catctaattg
     8281 agcgatacga gccaataatt tattcaaaat ttcaacgttg ttaagctgaa tttccatatc
     8341 aatggtggca aggctacgtt tcacatcggt tcggctggaa acgcctaaca cgtttacttt
     8401 ttcatttgcc ataattgcac tgacatctcg cagtaagccg ttgcggtcat tggcaatcac
     8461 tcgaatggtt aagcttaaac cagaggtata gccttcgccc caatccgcct ccacaactcg
     8521 ttctgggttg agactttgta attcaaacag ttgctcacaa tctgcacggt gaatcgaaat
     8581 ccctctgcct tgtgtgatgt aacccacgat ttcatcaccc ggaatcggct ggcagcaacg
     8641 ggcaatggaa tgcattaagt tccctacgcc ctctacaatc acatagcctt tgcttggctt
     8701 cggctgattg gtgtttttat tcacctgttt aagtaccgct tcgtcttctt gttcggcggt
     8761 cggtttaatt aattttgatt gcaagaagtg cattaactga tgaagacgaa tatcgccacc
     8821 gccaataccg gcatagagat catcaaactg ttttaagtta tagcgaggca gagcatattc
     8881 ttcaatttgc ttgagcgtaa aaccgaattt ttccatttcg gcttcaaggg cctctttgcc
     8941 gattggaata tttttctctc ggtctaattt tttaaaccac gcaataattt ttgagcgagc
     9001 tttgcctgta ttcacaaaac cggtattcgg attgagccaa tctcggcttg ggttcggctc
     9061 tttttgggtg ataatttcaa cctgatcgcc catttgcaga tgataagtaa acggcacaat
     9121 ccgccctgcc acttttgctc caatgcaacg atgcccgatt tcactatgaa ttgcataagc
     9181 aaaatcaagt ggtgtagctt tttgcggtaa atcgatcacc tcgcctcttg gggtaaagac
     9241 ataaacacga tcatcaaaaa tttgcgaacg catttctgcc accatatcgc ctgaatcggc
     9301 aagatcgttt tgccactcaa gcaatttgcg tagccacacg attttttctt cgtagcccga
     9361 acgccctgcg gttgccccct ctttatattt ccagtgagcg gctacgccta gctccgcatc
     9421 atcgtgcatt tgctgggtac gaatttgcac ttcaatcgtt ttttcacctt cgcctaatac
     9481 aactgtatga atagactgat aaccgttagg ttttgggtta gcaatataat catcgaaatg
     9541 ttccggcaaa tgggtatatt tggtgtgaat aatgcctaat gccgtgtagc aatcttctaa
     9601 cgttggcact attacccgca cagcccgaat atcgaaaagc tgattaaatc tcaaccgttt
     9661 tttctgcatt ttcttccaaa tgctgtagat atgtttcggg cgtccataaa tctgcacatt
     9721 cttgatttca ggacttaaac aagcggtcag atctgctaca aaatttgcaa tataacgctc
     9781 acgatccaca cggcgttcgc ccaattcaaa tttagcaatt tgagtgtaag agacagggtg
     9841 taaaatgcgg aaacagtaat cttccagctc ccatttgagc tgcccgatac ccaatcgatt
     9901 ggcaagcggt gcataaacgt gagaacattc tttagcggcg agaacggtat cttcttcgga
     9961 atggtggtta ctatcacgca ggtaggcaat tcgttcggca agtttaatca ccacacagcg
    10021 gaaatcgtcc accatcgcca acaacatgcg acggatattg tcgatttgca gatccgacac
    10081 attattggca ctaagctggc ggatattctc catttcgagt acgcctttaa ctaagttttt
    10141 gatgtcgtta ctgaaatctt cttttaattg caccaagtcg atcacattgt gttttaccag
    10201 aggaaaaagc attgcggcaa ctaagctgtc atcgtccata ttcaagccgt gcaatacttc
    10261 aaccatctca atgccatacc acatcagact atagtcggta tccagttttt cctgtgcata
    10321 actccacgca ttgtgaatct gctcaaaagt cacaggagac atattcaggc ttgcacacca
    10381 actcgacaac tcaaaattat tcggttcaag ttgatgggaa taacgaattg ctaccataag
    10441 gcctccttgt aaatttttgt ggaaattaga ccgcttgtac agcttaaaat ggagttttat
    10501 tatacgtgga aattcagaaa aaatttaccc ctaatcgaaa atttaatcca agttatctta
    10561 tcctctttac tccttaagag gtagcaacct tgtgataaat caaacctatc aacacaatca
    10621 tttgcacgac ttcacgctct tgattaaaat acttgcgttt ttattttgat ctttattttt
    10681 gtgggtagca atgacaattt tagctttagg aatcaaccat aaaaccgcct ctgtgggttt
    10741 aagagagaaa gtggcgtttg tagatgacaa acgtaaactg gctcttgaac aaatccaaac
    10801 gagcggattg gctgaaagcg tggtcattct ctctacctgc aaccgcaccg agctctactt
    10861 ccaccagcct aatatttctc cccgtgaaga gagcgaggaa aatatccaat ggcgtgaaca
    10921 atgtttccgc tggtttgccc aaattcatca acttgatgaa agcgagttgc gtgaatgttt
    10981 atattttaaa caaaatttag aagccgctaa ccacttaatg aaagtggcaa gcggattaga
    11041 ttcactaatt ttaggcgaac cacaaatttt agggcaggtt aaacaagcct atcaatatag
    11101 cgaagatttc taccaacatc agcaaaaagc gatgtccacc aagctatcac gcttgttcca
    11161 acgcaccttt gccaccgcaa aacgagtacg ttccgaaacc gaaatcggca gccaagcggt
    11221 gtcagttgct tatgcagctt gcggtttagc ccgtcaaatt ttcgataatt ttggcaagtt
    11281 acgctttttg ctggtagggg caggcgaaac cattgaatta gtcgcccgct atttaattca
    11341 acacggggcg aaaaatataa tgttggcaaa ccgcacccat attcgggcgg aaatgttggc
    11401 ggaaaaacta aacgctccaa tgcaaattct gtcgttaagt gctttgcaac tcggtttaaa
    11461 ccaagctgat gtagttatta gctccaccgg tagccctgat accctaatca gtaaagaaat
    11521 ggtggaaatt gcgcaaaaac aacgccaatt tgacccactt ttgctgattg atattgccgt
    11581 tcctcgtgat attgacgaaa aagccggcga cttagagggc gtttacgctt atagtgttga
    11641 tgatttacaa aatattatcc aacgcaatat ggctcagcgt gaagaagccg ccaaacaagc
    11701 cgctgaaatc gtcaaagagg aaagcaaagc attttttgaa tggttaaaac aacagcagtc
    11761 tagtgattta atcaaacgct atcgtcaaga tgcggagcaa acccgccaag aattgttgga
    11821 gaaagcccta caagcaatca gtcaagggca agacagccaa aaagtattaa gtgagctaag
    11881 ctacaaactc accaaccagt tactacacgc cccaacccaa gcgttacaag caatggcaaa
    11941 aagtggcaac tccaccggct tacaaagttt ttcaagagca ttacggctag aagaatgatg
    12001 ctcagcacat tcttttaggc atatttgcaa aaaattgaac atttttaacc gcttgcggac
    12061 gcacgccgtg cgtccctccc cgtgttcccg atcttcttct aatttcaact tccccaaatt
    12121 tccgctataa taagccaatt tttgcaacta ttttgcaaat aaccggatat agaggataca
    12181 aaatgactcc tgttgttgcc ctagtgggca gacctaatgt cggcaaatcg actttattta
    12241 accgtttaac ccgtactcga gatgccttag tagcagattt ccccggctta acccgagacc
    12301 gtaaatatgg tcacgctaat attgccggct acgatttcat tgtaatcgac accggtggta
    12361 ttgatggtac agaggaaggc gtggaagaaa aaatggcgga acaatcttta ttggcgattg
    12421 aagaagccga tgtggtgctt ttcttggttg atgcccgagc cggattatta cctgccgatg
    12481 tcggcattgc tcaatattta cgccaacgtg aaaaaaccac ggtggtggtt gccaataaaa
    12541 ccgatggtat tgatgccgac tctcactgtg ccgaattcta tcaattaggc ttaggcgaag
    12601 tagaacaaat tgctgcagca caagggcgtg gggttacgca gcttatcgag caagtgttag
    12661 ctcctttagg cgaacagcta aatgccgagc aatttaacca agaacaagcg ggcgaaaatg
    12721 ctaaaaatgt tgcaaatgaa gaaacagacg aatgggatac cgaattcgac tttgagaacg
    12781 aagaagatgc ggcattatta gatgaagcct tggcagaaga agcagaagag tcgattgaag
    12841 ataaaaatat caaaattgcg attgtcggtc gtccgaatgt tggtaaatca acactgacca
    12901 accgcatttt aggcgaagag cgtgtggtag tttatgatat gccaggaaca acccgtgatt
    12961 ctatttatat tccaatggag cgtgacggtc agcaatatac catcattgat accgccggtg
    13021 tgcgtaaacg tggcaaagtg aatttagcgg ttgagaaatt ctcggtaatt aaaaccttgc
    13081 aagccattca agatgcaaac gtggtgctat taactattga ggcccgagaa ggtatttccg
    13141 atcaggattt atcactactc ggctttattc taaatgctgg tcgttcattg gtgattgtgg
    13201 taaacaaatg ggacggcttg tcgcaagata ttaaagatca agtgaaatca gagttagatc
    13261 gccgtttaga ttttattgat tttgccagag tgcattttat ctcggcattg cacggctcag
    13321 gcgtggggaa tttgtttgat tcagtaaaag aagcctacgc ttgtgcaacg caaaaaacct
    13381 cgacctcaat gctgactcgc attttgcgta tggctgctga tgaacaccaa ccaccattgg
    13441 ttaatggtcg ccgagtgaaa ttaaaatatg ctcacccggg tggctacaac ccaccaatta
    13501 ttgtgattca cggcaatcag gttgaaaaat tagcggattc ttacaaacgt tatttaagta
    13561 attatttccg taaaagttta aaaattatcg gctcgccaat tcggatttta ttccaagaag
    13621 gcaataatcc ttttgccggt aagaaaaaca aactgacacc aagccaatta cgcaaacgta
    13681 aacgtttgat gaa
//
LOCUS       DANMCL010000078        13550 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.078, whole genome shotgun sequence.
ACCESSION   DANMCL010000078 DANMCL010000000
VERSION     DANMCL010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13550
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.078"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..442)
                     /locus_tag="PXF40_002031"
     CDS             complement(<1..442)
                     /locus_tag="PXF40_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014668079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMP-N-acetylneuraminate-beta-galactosamide-
                     alpha-2, 3-sialyltransferase"
                     /protein_id="HDL5803339.1"
                     /translation="MNLIICCTPLQVLIAEKIIEMHPNERFYGVMLSTVKNAKFDFYQ
                     ARLAQKCEQFFAMQQHSERIQLLKEIIYLKRTFGGKKFNKVFLANINELEIQFLLSAI
                     SFQELNTFDDGTANIVQNSIFYQAENIGLNRKLINFFLGNKYSLE"
     gene            complement(439..1644)
                     /locus_tag="PXF40_002032"
     CDS             complement(439..1644)
                     /locus_tag="PXF40_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HDL5803340.1"
                     /translation="MKAVKDSVIYLIGELASKSIPFLLLPYFSRKLGVAGYGELSYYQ
                     TFAALFVIFIGLSQDGAVARYFYFYGKRSLNLVLSTGYLYTLCATLLILLGCWYFQSE
                     IIAYVAIGAMFQSFLNVQLSVRQCQKQALAYTTIQLMSAIFSAVITVAMMEYFKTDLV
                     EKRILAILMSNGLVFLIAYFLYAKRAKTKKFSLARHKTALLYLFGFGIPLILHHSSIF
                     LKGQLDRVFIYHKFSEEDLGLYAMGAQIAMILAIVVQALNKATLPYFYEALKQKKINV
                     SHIHKWALYALFIVPLPAIVMWFIPEELVVWILGSQFVGTKYYIILFLIATMLVVPYL
                     ILVNYLFFYGKNKLISLCSILSTIFYLVALFALTFSKIEYIPFASIIGAISIIPILYI
                     MTAKVGKTV"
     gene            complement(1654..2838)
                     /gene="neuC"
                     /locus_tag="PXF40_002033"
     CDS             complement(1654..2838)
                     /gene="neuC"
                     /locus_tag="PXF40_002033"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HDL5803341.1"
                     /translation="MKNIAYITGSRAEYGIVKRLLQKLAQDPTVNFSLVVTAMHLDPQ
                     YGNTVTVIEQDGFEIAARIPLTLNSENNQTIIHSMAECLDRFGEHFQQHRYDAVIVLG
                     DRYEMLAVATAAAMHNIPLIHLHGGEQTLGNYDEFIRHCITKMSKLHLTSTEEYRQRV
                     IQMGELPENVVNTGSLGAENSLDLVLPTQAELVERLGIPASPYFLVVFHPETLTDVSV
                     LEQIEALLNAFEQFKDKYQFVFIGSNSDTNSEQIYARFKAYTDENQFKFFTSVKPEEY
                     LALIKYSNGLIGNSSSGLIEAPSCGVGTLNIGNRQQGRVRDESVIDVESNEQAIIDGI
                     EKLISADFQHRLPSMKNPYFQDNAMEKAYNAIKIFLADSHHTQPKGFYDVAFSQAVKK
                     SE"
     gene            complement(2839..4098)
                     /locus_tag="PXF40_002034"
     CDS             complement(2839..4098)
                     /locus_tag="PXF40_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylneuraminate cytidylyltransferase"
                     /protein_id="HDL5803342.1"
                     /translation="MKKIAIITARAGSKGLPNKNVLLANGKPLMAYSIEAAIESGQFE
                     KIIVSTDSQEYIDLFSHYPIEFIKRAEHLASDKASSFVVIEDVLNQYRSVEFDYFMLL
                     QPTSPLRSGEHIKESCEKFEKNFEQFDFLVSVSDAHKPTTLTRMIEEDECLKHFQLDY
                     SNYARQLHHPEYSPNGAIFTAKPEAYLKQKHFYGAKCLAYFMDKDVSIDIDDRQDFEY
                     FYFILQQRNKEKILLETIKRSILMKKENFKEVKEIALIGHSIIEYWDIEHLNGKAVNN
                     LGIAGISTKQYSDLILDEGLISALPKDIILMFGTNDIVYAGWSDEKILADINHLIAQL
                     TAIRGDINLYFLEITPTAFRVDRNNNDIRLLNQYLKDNLAVKWISLDQAFSDKYGKLD
                     LSYSDDGLHLNAKGYEKLTAILEKELN"
     gene            complement(4158..5195)
                     /gene="neuB"
                     /locus_tag="PXF40_002035"
     CDS             complement(4158..5195)
                     /gene="neuB"
                     /locus_tag="PXF40_002035"
                     /EC_number="2.5.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate synthase"
                     /protein_id="HDL5803343.1"
                     /translation="MVNVFIVAEIGCNHNGDPALAKKMVDVAKECGVDAVKFQTFKAD
                     KLISKYAPKAEYQKVTTGTADSQLEMTRKLELPYEEFVKLEAYARSLGLEVFSTPFDF
                     ESIDFLASQQQKVWKIPSGELTNLPYLEKIARLPIEGKTIVISTGMATIEETKASLKV
                     LEDNGVAKKDITILHCNTEYPTPYEDVNLNAFHQLKQEFGDYSLGFSDHSAGYFAGLA
                     AVPYGITFIEKHFTLDKNFEGPDHKASVTPEELKLLCEGIRAVEKSLGSSEKLVTNSE
                     AKNKIVARKSIIAARPIKKGEIFTTENITTKRPGNGISPMFWYDVLGKEAQQDFEEDQ
                     LIQDSRFENQM"
     gene            complement(5195..5839)
                     /locus_tag="PXF40_002036"
     CDS             complement(5195..5839)
                     /locus_tag="PXF40_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HDL5803344.1"
                     /translation="MQQKSKREKLILIGAGGYAKSVLDSLDHEQYEFCGLIDNFKPEG
                     SVHLGYPILASTIDCFSKRDNYHYFICIGNNSYRLEKFSKLQKYKCRIINVVDKTALV
                     SKNSTLGIGVFVGKMAIVNSGVTVGDNVIINTKSLVEHGCFIGSHCNISTNTTLNGDV
                     IVEDHAFIGSSSVVNGQLRVGESALVGSGAVVIRNVEPRTVVAGVPAKYIKDIK"
     gene            5972..6715
                     /locus_tag="PXF40_002037"
     CDS             5972..6715
                     /locus_tag="PXF40_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005615381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5803345.1"
                     /translation="MFEFIKLITAMILPPFNIILLWLLALILFSLGYKYAAYFFALLG
                     ILILYIFSIPYTSQKLGDSLVEAEPFTIEKYKNAQAIVVLGGGLRDSQELFGKLAITG
                     IPLERMRYAAYLHKETGLPILATGSSPNGTSEAKVMADEFKMFFNIETKWLENKAKTT
                     KENAIFSREILEKENIHKIILVTNQWHMKRAEMLFSQQGFEVMSASVGSGDTPDHYKL
                     NFMHFIPQAGAMNSNMLALKEWIGYWKEK"
     gene            complement(6792..8990)
                     /gene="priA"
                     /locus_tag="PXF40_002038"
     CDS             complement(6792..8990)
                     /gene="priA"
                     /locus_tag="PXF40_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HDL5803346.1"
                     /translation="MALNVPLHRYFDYLLPPAFNACQGGRVVVPFGRQTKIGIVVDFP
                     QTSDVPTEKLKPIKAALDSSPIFDSEMWQLLNWAARYYHAPIGEVLTGALPIKLRNGD
                     STERVQPNYFVVTEQGRKSLIIGENKKAKKQVERLTELAECAKYFEKPTACSPSAWKG
                     LLEKGYIEKIDVPFMAQAWQDSLGEFPLVNTNNRLILNKQQTLVVSRLNAQTTFASFL
                     LNGVTGSGKTEVYLQLIETVLKREEQVLLLVPEIGLTPQTVQRFKARFNVEIDVLHSN
                     MNETERLNAWLRAKNGESAIVIGTRSALFTQFQKLGVIILDEEHDSSFKQQDGWRYHA
                     RDLAVVRAKNANIPIVLGSATPSLESLHNVQNGKFIELTLTARAGNAQLANQQIIDLK
                     TQRVTAGLSERLLSMMKTQLEQGNQVMLFLNRRGFAPVLLCHECGWVCECEACNKPFT
                     YHQKQKVLRCHHCATQRVIPRQCGHCGSTHLITTGVGTEQLEQVLNQQFPHYQVTRID
                     RDSTARKGALENHLTAIREGKSQILIGTQMLAKGHHFPNVTLVAIVNVDSALFSTDFR
                     AEEKLAQLYIQVAGRAGRAEKKGEVVLQTHYPDHPLLKTLLEQGYRAFADEALKMRQL
                     MSLPPFSSQVLFKATGKDNQQTLQLLEQLADYFSQKIQQQNGQGFQLPPPFSAPMAKK
                     AGHYRWLLLIQHPLRGALQQLLDAFDQERESLNIPNNIRLNIDIDPQEIS"
     gene            complement(9002..9614)
                     /locus_tag="PXF40_002039"
                     /pseudo
     CDS             complement(9002..9614)
                     /locus_tag="PXF40_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family translocator"
     gene            complement(9607..10506)
                     /gene="rarD"
                     /locus_tag="PXF40_002040"
     CDS             complement(9607..10506)
                     /gene="rarD"
                     /locus_tag="PXF40_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HDL5803347.1"
                     /translation="MLKGILLSLSASVLFGCMYYLAIFLKPLAGVSIFGIRMLVTIPF
                     LFLALYLFKKQNEFWVFLQRLKQEPYLLLVILITASIVGGQMWLFLWAPNSGKAIEVS
                     MGYLLMPIIMVAFGKVVYKETLSLNKWLAIVVAFIGVASNILFTGKISIASLFVCTGY
                     PIYFYLRRKFGLSHLHSFVVEILYLLPVACYFISQTDMQYVETQNLNIYYFIALLGLI
                     SGTALISYTLASTILPFNLLGLLGYVEPLLMLVVSFLIGERLANESYLLMICLLISIS
                     FLVLDGMFALRQQRKRKLSVNNE"
     gene            complement(10733..11950)
                     /locus_tag="PXF40_002041"
     CDS             complement(10733..11950)
                     /locus_tag="PXF40_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HDL5803348.1"
                     /translation="MDRFPKSDKLAQVRYDIRGPIHKEALRLEEEGHKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIVQYYQSKGMRGMDVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPMPDYPLWTAASTLAGGKAVHYLCDEENEWFPDLED
                     IKSKITPRTKGILVINPNNPTGAVYSRQILLEIAELARQHNLIIFADEIYEKIVYDGA
                     VHHHIAALAPDVLTVTYNGLSKAYRVAGFRQGWMVLSGPKHQAKGFIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFVLPGGRLLEQRNKMHELLVQIPGISCVKAKGALYM
                     FPKIDTEMYGIKDDQKFIYDLLRQEKVLLVQGSGFNWKKPDHFRVVTLPYAHQIEEAI
                     GRLANFLKTYRQD"
     gene            12138..13442
                     /locus_tag="PXF40_002042"
     CDS             12138..13442
                     /locus_tag="PXF40_002042"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HDL5803349.1"
                     /translation="MLIFHQLKQELTKSYSKVGREQGLVAIQASMPLLEANIPLLGWL
                     KTQKTSYPHFFLQYRDTDQTIATIGTLRQFYTLEAAQSFIQQHHFPLIGGLQFEGNTQ
                     FILPQFSLVKNQQNLTACFYFDSDNFEQQAVIFEQFLANFSQITELGLTDNPLVSMSA
                     TSHFEQWKANIEKAIVSIEQGDFQKVVLANAMRLHFEQPICAYSLLAQSQKTNLGCYH
                     FLWAESADVAFLGSTPERLYQRQGLHFSTEALAGTAAVTTSEVQTELNAQWLLSDPKN
                     IYENQLVVDDIENQLKDCVTEFAVSEAKIKRLHNVQHLRRQIQATLKPDTSDSDCLSK
                     IHPTAAVAGLPRQKAKGFITENEPFTRHWYAGTLGVMGNEEAEFCVTLRSALISQNSI
                     TLYAGAGIVSGSDPQSEWQEIKRKAQGMAKLLDVDLVTKGEL"
BASE COUNT         4193 a         2880 c         2458 g         4019 t
ORIGIN      
        1 tttctaggct atatttatta cctaaaaaaa agttaatcaa ttttcgattt aacccaatat
       61 tttcagcttg atagaaaata ctgttttgta caatattagc tgtgccatca tcaaaggtat
      121 tgagttcttg aaatgaaatg gcacttaaca gaaattgaat ttctaactca ttgatatttg
      181 ctaaaaagac tttattaaac ttcttaccgc caaaagtacg ttttaaataa ataatttctt
      241 ttaataattg aatacgctcg ctatgttgtt gcatcgcaaa aaattgttcg cacttttggg
      301 ctaatctagc ttggtaaaaa tcaaatttcg cgttttttac cgtagaaagc atcaccccat
      361 agaatcgctc attagggtgc atttcaatga ttttttcagc aatcaacact tgcaagggcg
      421 tgcaacaaat aattaaattc atacggtttt tcctactttt gccgtcatta tataaagaat
      481 cggaataatg ctgattgcac caatgatgct ggcaaaagga atatattcaa ttttagaaaa
      541 agttaaagca aatagtgcaa ctaaataaaa aatagtagat aaaatcgagc aaagcgaaat
      601 tagcttattt ttgccataaa aaaacaaata attgactaaa atgaggtaag gcacaaccaa
      661 cattgtcgca attaaaaaga gaataatgta gtattttgtt cctacaaatt ggctacccag
      721 aatccatacc actaattctt ccggaataaa ccacatcaca atagcaggta atggtacaat
      781 aaataaggca tacaacgccc atttgtggat atggctgaca ttaatttttt tctgctttaa
      841 ggcttcataa aaataaggca gtgttgcttt atttaaggct tgaaccacaa tggctagaat
      901 catcgcaatt tgagccccca ttgcatataa acctaaatcc tcttcgctaa atttatggta
      961 aataaatact ctgtctaact gtccttttaa gaaaatactg gaatggtgca aaatcaacgg
     1021 aataccaaag ccgaataaat acaataaagc agttttatgg cgggcaaggc taaatttctt
     1081 cgtttttgct cttttagcat acaaaaagta agcgattaga aagactaagc cattactcat
     1141 caaaatcgct aaaatccgct tttccactaa atcggtctta aaatactcca tcattgcaac
     1201 ggtaataact gccgaaaaaa tcgccgacat taattgaatc gttgtataag caagtgcctg
     1261 tttttgacac tgccttacac taagctgtac attcaaaaac gactggaaca tcgccccaat
     1321 cgctacataa gcaataattt cagactggaa ataccagcaa cccaacagga taagcaaagt
     1381 tgcacaaaga gtatataaat accctgtact caagactaaa tttagtgaac gcttaccata
     1441 aaaatagaaa tagcgagcaa ccgcaccgtc ttggctaagc ccgataaaaa ttacaaataa
     1501 agcagcaaag gtttggtagt aggaaagctc cccataacct gccacgccga gtttgcgtga
     1561 aaagtagggt aagagcaaga aaggaattga ctttgacgcc aattccccaa ttaaataaat
     1621 cacactgtct ttaactgctt tcatagttgc aaattattct gattttttga ccgcttgcga
     1681 gaaagcaaca tcataaaatc ctttcggttg agtatggtgg ctgtctgcta agaatatttt
     1741 gattgcattg taagcctttt ccatcgcgtt gtcttgaaaa tatggatttt tcatactcgg
     1801 taaacggtgt tggaaatcgg ctgaaatcaa tttttcgata ccatctatga tagcctgttc
     1861 attactctct acatcaatta cgctctcatc ccgtactcgc ccttgctggc gattaccgat
     1921 atttagcgta ccaacaccac aactcggtgc ttcaatcaag cctgatgagc tattaccaat
     1981 caacccattt gaatatttaa tcaacgctaa atactcttcc ggtttgactg aggtgaaaaa
     2041 cttaaattga ttttcatcgg tgtaagcctt aaaacgtgca taaatttgct ctgaattggt
     2101 gtctgaattt gagccgataa agacgaattg gtatttgtct ttaaactgct caaaagcatt
     2161 gagtaacgcc tcaatttgct ccaacacgga aacatcggtt aaggtttccg ggtggaagac
     2221 cactaaaaaa taaggcgatg ccggaatccc taatctctcg actaattctg cttgggtcgg
     2281 caacactaaa tccaaactat tctccgcccc tagagaacca gtattcacca cattttcggg
     2341 cagctcgccc atttgaatca cacgctgtct atattcttca gttgaagtta aatgcaattt
     2401 cgacattttg gtaatacaat ggcgaataaa ttcatcgtaa ttacctaatg tttgctcacc
     2461 accgtgcaga tgaatcagcg gaatattatg catcgccgca gccgttgcca ccgccaacat
     2521 ctcgtaacga tcgcctagca caatcaccgc atcataacga tgttgctgga aatgttcgcc
     2581 aaatcgatct aaacactctg ccattgaatg aataatggtc tgattatttt cactgtttaa
     2641 ggtaagcgga atacgagctg caatctcaaa gccatcttgc tcaatgaccg tcaccgtatt
     2701 gccatattgc ggatccaaat gcatcgcagt aacaaccaga gagaaattca cagtcggatc
     2761 ttgtgctaat ttttgtaata aacgctttac aatcccgtat tcggcacgag atccggtaat
     2821 ataggcaata tttttcattt agttgagctc tttttccaaa atagcggtta atttttcata
     2881 accttttgca tttaaatgta atccgtcatc gctatagctt aaatccaatt tgccatattt
     2941 atcgctaaat gcctgatcta agctaatcca tttcaccgct aaattatctt taagatattg
     3001 atttaacaag cgaatatcgt tgttattacg atcgactcta aatgcagttg gggtaatttc
     3061 caagaaatag agattaatat ctccacgaat tgctgttaat tgtgcaatta aatgattaat
     3121 atctgctaga attttttcat cactccagcc agcatataca atatcattag taccgaacat
     3181 taaaataatg tctttaggta aagcagaaat taaaccttca tccaaaatca gatcactgta
     3241 ttgttttgtt gaaatacctg caattcctaa attattaact gccttaccgt ttaaatgttc
     3301 aatatcccaa tattcaatga tcgaatgccc gattaaggct atctctttca cttctttaaa
     3361 gttctctttt ttcattaaaa tcgaacgttt aatggtttca agtaagattt tttctttatt
     3421 gcgttgttgc agaataaagt agaagtactc gaaatcttgg cgatcatcaa tatcaataga
     3481 aacgtcttta tccataaaat aggctagaca tttcgcacca tagaagtgtt tttgtttaag
     3541 ataggcttct ggcttagctg taaaaatagc tccattcggt gaatattcag gatgatgcaa
     3601 ttggcgtgca tagttagaat aatccaactg aaaatgcttt aggcactcgt cttcctcaat
     3661 catacgagtc aatgtcgtag gtttatgggc atcagaaaca gatactaaga aatcaaattg
     3721 ttcgaaattt ttctcaaatt tttcacacga ttccttaata tgctctcctg atctcaacgg
     3781 cgaagttggt tgaagtagca taaaatagtc aaactctact gatctatatt gatttaacac
     3841 atcttcaatc acgacaaaag aactcgcctt atcactggct aaatgctcgg cacgtttaat
     3901 aaattcaatt ggataatgtg agaacaaatc aatgtattct tgggaatcag tactaacgat
     3961 aattttctca aattgccccg actcaatcgc agcttcaata gaataggcca ttaacggctt
     4021 accgttggct aataatacat ttttattcgg caagcctttt gaaccggctc gggctgtaat
     4081 aattgcaatt tttttcataa atttgaccgc ttgttaaaca caaaatgatg gagctttcat
     4141 cccatcacta tattatatta catctgattt tcaaaacgag aatcttgaat taattgatct
     4201 tcttcaaaat cctgttgtgc ttctttacct agcacatcat accaaaacat cgggctaatg
     4261 ccattaccgg ggcgtttagt cgtaatattt tcggttgtaa aaatttcgcc ttttttaatt
     4321 ggacgtgccg caataattga ttttcttgcc acaattttat tttttgcttc cgaattagtg
     4381 actaatttct cggaagaacc cagcgatttt tccaccgcac gaatgccttc acacagtaat
     4441 ttcagctctt caggtgtaac cgaagcttta tgatccggac cttcaaagtt tttatctaag
     4501 gtaaaatgtt tttcaatgaa ggtaatgccg taaggtactg ccgccaaccc tgcaaaataa
     4561 ccggcagagt ggtcagaaaa acctaaacta tagtcgccaa actcctgttt tagctgatgg
     4621 aacgcattta aattcacatc ttcataaggt gtcgggtact cggtattaca atgtaaaatc
     4681 gtaatatctt ttttcgctac accgttatct tccaatactt ttaatgaggc ttttgtttct
     4741 tcaatggttg ccataccggt agaaataacg atcgtcttgc cttcaatcgg aagtcgtgca
     4801 attttttcta aatacggcaa attggttaat tcaccagacg gaattttcca cactttttgt
     4861 tgttggcttg ccaagaaatc aatcgactcg aaatcgaatg gcgtagagaa tacctctaac
     4921 cccaatgaac gagcgtaagc ctctaatttc acaaactcct cataaggtaa ctctaatttg
     4981 cgggtcattt ctaattggga atcagcggtg ccggtcgtta ctttttgata ctcggcttta
     5041 ggggcatatt tagagatcaa cttatccgct ttaaaggttt ggaatttcac cgcatcgaca
     5101 ccacactctt tcgctacatc aaccattttc tttgctaacg caggatcgcc gttatggtta
     5161 caaccgattt ctgccacaat aaatacattt accattattt tatatcctta atatattttg
     5221 ctggaacgcc tgctacaact gtgcgaggct ccacatttct aattaccact gcaccggagc
     5281 caaccaatgc actttcaccc actcttagct gtccgttcac aacagaggaa ctaccaataa
     5341 aagcatgatc ttcgacaatt acatcgccat ttagtgtcgt attggttgaa atattgcaat
     5401 gactgccgat aaaacaacca tgctcaacca gcgatttagt gttaatgatc acattatcgc
     5461 ctacagttac gccactgttt acaattgcca tttttccaac aaacactcca atgcctagag
     5521 tggaattttt ggacaccaat gcggttttat ctaccacatt aattattcta cacttatatt
     5581 tttgtagctt agagaatttt tctaaacggt aactattatt tccaatacaa ataaaatagt
     5641 gataattatc tcgtttagaa aaacaatcaa ttgttgaagc tagaatagga taacctaagt
     5701 gcacactacc ttcaggctta aagttatcga taagtccaca aaattcatat tgttcgtgat
     5761 caagtgaatc taacactgat ttggcatagc caccggcacc gatcaaaatc aatttttctc
     5821 ttttagactt ttgttgcatt gctatcaccc atgatgaatt tcaattcata tggagtattc
     5881 taatactttt caagatagaa aaatagacaa gtcttatata atttaggaaa atgaacatat
     5941 ctttacttat ttttactacg atattctttc tatgttcgag ttcattaaac tgatcaccgc
     6001 aatgatcctc ccgccattta atattatttt gctgtggttg ttagcattaa tcctcttttc
     6061 tttaggctat aaatacgctg cttacttctt tgccttgtta ggtattctga ttttatatat
     6121 cttcagcatt ccctatactt cacagaaatt aggggattca ttagtcgaag cagagccatt
     6181 taccatagag aaatataaaa atgctcaagc gattgtggtg ctaggtggcg ggctacgaga
     6241 cagccaagag ttattcggca aactggcaat taccggtatt ccgctggaaa gaatgcgtta
     6301 tgccgcttat ctgcataaag aaaccggctt accgatttta gcgaccggaa gcagcccaaa
     6361 tgggacttct gaggcaaagg ttatggcaga tgaatttaaa atgttcttca atattgagac
     6421 caaatggctg gaaaataagg cgaaaaccac caaagaaaat gcgattttca gccgtgagat
     6481 tttagaaaaa gagaatattc ataaaatcat tcttgttacc aaccaatggc atatgaaacg
     6541 ggctgaaatg ctgtttagcc aacaaggatt tgaggtgatg tctgccagcg tcggttctgg
     6601 cgatacgccc gatcattaca aactcaactt tatgcacttt attccgcaag ccggtgcaat
     6661 gaatagcaat atgctggcat taaaagagtg gattggttat tggaaagaga aataaccgaa
     6721 gataaatagc agcaaggcag gttttcacct gccttctttt tgcaaaaaat cagtcaaaaa
     6781 caaccgcttg tctaactaat ctcttgtggg tcaatgtcga tattcagcct gatattattc
     6841 ggaatgttta aactttccct ttcttgatca aaggcatcga gtagctgttg taatgctcct
     6901 cggagagggt gttgaatcag caataaccag cggtaatgtc ctgctttctt cgccattggg
     6961 gctgaaaatg gtggagggag ctggaagcct tgcccgtttt gttgctggat tttttggcta
     7021 aaataatctg ctaattgctc aagcagctgt aaggtttgtt gattatcttt gccggtcgct
     7081 ttgaacaaaa cttgcgagga aaatggtggc aaactcatta attgcctcat ttttaacgcc
     7141 tcatcagcaa aagctcggta gccttgttcc agcaaggttt taagcagtgg gtgatcaggg
     7201 taatgggttt gtagcaccac ttcgcctttt ttctccgctc gccctgctct gcctgccacc
     7261 tgtatgtaaa gctgtgctaa tttttcttcc gcacgaaaat cagttgaaaa taacgctgaa
     7321 tccacattaa caatcgccac caacgtcaca ttcgggaaat gatgcccttt tgccaacatt
     7381 tgcgtaccaa tcaaaatttg gcttttgccc tctcgaatag cggtcaaatg gttttccaat
     7441 gcacctttgc gagcggtaga atctctgtct atacgagtca cttggtaatg agggaattgc
     7501 tgatttagca cctgctcaag ttgttctgtg ccgacaccgg tagttattaa atgggttgaa
     7561 ccacaatgtc cgcattggcg gggaattacc ctttgggtgg cacaatgatg gcaacgcaac
     7621 actttttgct tttggtggta agtaaaaggc ttattacacg cctcgcactc acaaacccaa
     7681 ccgcattcgt gacaaagtaa taccggggca aagccacggc gatttaaaaa cagcatcact
     7741 tgattgcctt gctctaactg ggttttcatc attgaaagca agcgctccga caaaccggca
     7801 gttacccgtt gcgtttttaa atcaataatc tgctgattgg caagttgtgc attgccggcc
     7861 cgagcggtta gtgtcagttc gataaatttc ccgttttgca cattgtgcaa actttcaaga
     7921 cttggcgttg ccgagcccag cacaatcgga atatttgcat ttttcgccct aaccaccgcc
     7981 aaatcccgtg cgtggtaacg ccaaccgtct tgttgcttaa acgagctatc gtgttcttca
     8041 tccaagataa tcacgcccaa tttttgaaac tgggtaaata aagcagagcg agtgccgatt
     8101 acaatcgcac tttctccatt tttcgcccgc aaccacgcat ttaaccgctc agtttcgttc
     8161 atattcgagt gcaatacgtc aatttcaacg ttaaagcgag ctttaaagcg ttgtaccgtt
     8221 tgcggtgtta gcccgatttc aggcacaagc agcagcactt gttcctctcg cttaagcacc
     8281 gtttcaatta actgcaaata cacttcggtt ttgcccgagc ctgttacgcc attgagtaaa
     8341 aagctcgcaa aagtggtttg tgcatttaaa cggctgacca ctaaggtttg ttgtttattt
     8401 aagatcagcc gattgttagt atttactaac ggaaattcac ctagtgagtc ttgccacgct
     8461 tgtgccataa acggcacatc aattttctcg atataccctt tttcgagtaa gcctttccaa
     8521 gcagatgggc tacaagcggt cggtttttca aaatattttg cacattcggc aagctcggtt
     8581 aaccgttcca cctgcttttt ggctttttta ttttcaccga taatcagaga tttccgccct
     8641 tgctccgtca ccacaaaata attcggttga actcgctcag tggaatcgcc attgcgtaat
     8701 tttatcggta aggctccggt tagcacttca ccaatcgggg cgtggtaata acgagccgcc
     8761 cagttcagca gttgccacat ttctgagtca aaaatcgggc tagaatccaa cgctgcttta
     8821 atcggtttga gtttttcggt tggcacatca ctagtttgcg ggaaatcgac cacaatgccg
     8881 attttggtct ggcgaccaaa aggcacaacc acccgcccgc cttggcaggc attgaatgcc
     8941 ggcggtagca aataatcaaa ataacgatgt aacggcacat tcagtgccac tctgattaat
     9001 ctcacttctc taaaccaatt ttgattgcaa gcccgataaa tatcgagccg cagattttat
     9061 ttaaccaatt tccaaaggtt tgattatgcc gtaaaaaacg cccaacaggt gcagcggcta
     9121 agactaaaat acttacccaa ataatgctgg tggataaaaa cgttagcccc aacagcataa
     9181 aaggtatttt ccaaattact ggatacaaac tgcggcaata acgccaagaa aaagagcaat
     9241 actttcgggt ttaatagatt ggtaatcaac ccttgacgga atatcttcca tagaggaagt
     9301 ttgtctagat tgattttctc taacaccaac ggctctcgcc acattttaat gccgagatag
     9361 cagagataaa ttgcccctgc gtatttcaga aaattaaata aagtgggcga atgtgccaca
     9421 atgcctgcaa gcccgagtga aaccgcaaga atatggcata aaatgcctgc tagaatgccg
     9481 aatgaagaca ttaagcccga ctttttcccc tcagcaatag tgcgagttaa aatatagata
     9541 gtatccgaac ccggtgtaag atttagcaga atacaagcgg tcaaaaatcc ccaataattt
     9601 acaatatcac tcattattca cactcaattt acgtttacgc tgctgacgaa gagcaaacat
     9661 accatctaat actaaaaatg aaatggagat caacaagcaa atcatcaaca agtaagattc
     9721 atttgctaac ctttcgccaa ttaagaaaga caccaccaac atcaatagtg gctcaacata
     9781 gcctaataaa ccaagcaaat taaagggtaa aatcgtgctg gctagcgtat agctgataag
     9841 tgcagtgcca ctaattaaac ccagtaatgc aataaaatag taaatattga ggttttgtgt
     9901 ttcgacatat tgcatatcgg tttgagagat aaaataacaa gctacaggga gcaaatataa
     9961 aatttctacc acaaagctat gtaaatggct taagccaaac tttcggcgaa ggtaaaaata
    10021 gattgggtaa cctgtgcaaa caaataaact tgctatcgaa atttttcccg taaacaaaat
    10081 attactcgct acaccaatga aagcaaccac aatcgccaac catttattca aggaaagcgt
    10141 ttctttataa accactttgc caaatgccac cataataatc ggcattaata gatagcccat
    10201 tgaaacctca atcgcttttc cgctattggg agcccataaa aacagccaca tctgcccgcc
    10261 cacaatagat gccgtgatta aaataaccag caataaataa ggctcttgct ttaggcgttg
    10321 aagaaatacc caaaactcat tttgtttttt aaataagtat aaagcaagga aaagaaaagg
    10381 aatcgtaacc agcatacgaa tgccgaaaat gctcacacct gccagcggtt ttagaaagat
    10441 cgccaaatag tacatacagc cgaataacac tgaggctgaa agagataaaa gaatgccttt
    10501 taacatagtg ataagaaagt aattattttt taatttttca aatctcccct acccctcttt
    10561 tctaaagagg attgtcgagt tctaaataaa tgaataatgt tcggaggtag gggcgggtcc
    10621 agtgcccgcc cgcaaattaa tatcgttagc ggacaggcac aggacctgtc cctactgata
    10681 ttatagaact tacaaccctg cttttataaa gtggggtaaa gggagattcg acttagtctt
    10741 gacgataggt tttcaagaaa ttcgcaaggc gaccaatcgc ttcttcaatt tgatgtgcat
    10801 aaggcaaagt taccacacgg aagtgatccg gttttttcca gttaaaaccg gaaccttgca
    10861 ctaatagcac tttttcttgt cgcaacaaat cgtagatgaa tttttggtca tctttaatgc
    10921 cgtacatttc ggtatcaatt ttcgggaaca tatataacgc ccctttcgct tttacacagc
    10981 taatacccgg aatttgtacc aataattcgt gcattttatt tcgttgttcc agcaaacgac
    11041 cgcccggcaa cacaaattca ttgatacttt gataaccacc taatgcggtt tgaatggcgt
    11101 gttgcatcgg cgtattggca cataaacgca tagaagagag catatccaac ccttcaataa
    11161 aacctttggc ttgatgcttc ggaccgctca gcaccatcca gccctgacgg aaaccggcaa
    11221 cacgatacgc cttggataaa ccgttataag ttacggttaa tacgtccggt gcaagagcag
    11281 caatatggtg atgtaccgca ccatcataga caattttttc ataaatttcg tcagcaaaaa
    11341 taattaagtt atgctgacgg gcaagttctg caatttccag caaaatttga cggctataca
    11401 ctgctccggt cgggttattc gggttgataa ccaaaatccc tttagtgcga ggcgtgattt
    11461 tcgatttaat atcttcaaga tcagggaacc actcattttc ttcatcgcac aggtaatgca
    11521 ctgctttacc accggctagg gttgaagctg ctgtccataa cggataatca ggcattggaa
    11581 ttagaatttc atcgccatca tttaataacg cctgcatcga cattgtaatc agttcagata
    11641 cgccgttgcc gatgtaaaca tcgtttacat ccataccacg catacctttt gattgataat
    11701 attgcacaat cgctttgcgg gcagaataca aaccttttga atcacaatag ccttgtgcgg
    11761 ttggaagatt acgaatcaca tccactaaaa tttcatcggg tgcttcaaag ccaaaagggg
    11821 ctgggttacc gatatttaat tttaaaattt tatgcccttc ttcttctaag cgaagtgcct
    11881 ctttatgaat tggcccacgg atatcgtaac gaacctgagc taacttatct gatttgggaa
    11941 aacgatccat tgtaaacttc ctataatgta ttatctaatt gtagtctcat cccgctgttc
    12001 aaaaaatcgg taattcggaa tgaatttgta aacattactc taatttggga ggaaaaaaaa
    12061 gaggaaatac gttaaaatgg agaccttttt ttcaatcagc taaaaacaag cggtttcttt
    12121 ttctgatttt tttgcaaatg cttatttttc atcaattaaa acaagaactt acaaaaagtt
    12181 actcaaaagt gggaagagag caaggattgg tcgccattca agcctctatg ccgctattgg
    12241 aggcaaatat tccgctactc ggttggttga aaacacaaaa aacaagctac cctcactttt
    12301 ttctgcaata tcgtgataca gatcagacca ttgccaccat tggcacactt cgccaatttt
    12361 atacgctaga agctgcacaa tcttttattc aacaacatca tttcccgtta atcggcgggc
    12421 ttcaatttga aggcaatacg caatttattt tgcctcaatt ttcattggta aaaaatcagc
    12481 aaaatttaac cgcttgcttc tattttgata gtgataactt tgaacaacaa gcggttattt
    12541 ttgaacaatt tcttgcaaat ttcagccaaa ttaccgaatt aggactaacg gataatccgc
    12601 tcgtttcaat gagtgccacc agccattttg agcaatggaa agccaatatt gaaaaagcga
    12661 ttgtttctat tgagcagggc gattttcaaa aagtggtatt ggcaaatgcg atgagacttc
    12721 attttgagca acccatttgt gcttacagct tgctggcaca aagccaaaaa acaaatttag
    12781 gttgttacca ctttttatgg gcggaaagtg ctgatgttgc ctttcttggc tcaacccctg
    12841 agcggctata tcaacgccaa gggctacact tttctaccga agccctcgcc ggcaccgctg
    12901 cggttaccac cagtgaagtg caaaccgaac tcaatgcaca atggctgtta agtgatccca
    12961 aaaatatcta tgaaaatcaa ttagtggttg atgacattga aaaccaactc aaagattgcg
    13021 tgaccgaatt tgcagtatcc gaggcaaaaa ttaagcgttt gcataatgtg caacacctac
    13081 gccgccaaat tcaagcaacg ctcaaaccgg acacctcaga ttcagattgc ttaagcaaaa
    13141 tccacccaac tgcggcagtt gcagggcttc cccgccaaaa agcaaagggt tttattaccg
    13201 aaaatgagcc ttttacccgc cattggtatg caggtacatt aggcgtaatg ggcaacgagg
    13261 aagccgaatt ttgcgtaaca ctccgttctg cattaatttc acaaaattca attacgcttt
    13321 atgccggtgc cggcattgtg tcaggctcag atccacaatc ggaatggcaa gaaattaaac
    13381 gtaaggcaca aggaatggca aaactgttgg atgttgattt agtaacaaaa ggggaactgt
    13441 aagctaggct ttcagaactt aatctcttaa ttatttcttt ctatattttc atttccaact
    13501 tcccaacaaa atatattatt gccaccaaat tagtagtgaa tattccataa
//
LOCUS       DANMCL010000079        13538 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.079, whole genome shotgun sequence.
ACCESSION   DANMCL010000079 DANMCL010000000
VERSION     DANMCL010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13538
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.079"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            78..872
                     /locus_tag="PXF40_002043"
     CDS             78..872
                     /locus_tag="PXF40_002043"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HDL5803350.1"
                     /translation="MRLIPLETDHDVSVWAARYIVDRINAFQPTKEKPFVLGLPTGGT
                     PEKTYKELIKLYQAGEVSFKNVVTFNMDEYVGLPKEHPESYHSFMFKHFFDHVDIPLE
                     NINILNGMAEDVNAECERYEEKIRFYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
                     TLTEDTRIANSRFFNNDVSQVPKFALTVGVGTLLDAEEVMILVTGHNKALALQACVEG
                     AVNHLWTISCLQLHRRGIVVCDEPATQELKVKTVKYFKELEKNVAR"
     gene            953..2095
                     /gene="nagA"
                     /locus_tag="PXF40_002044"
     CDS             953..2095
                     /gene="nagA"
                     /locus_tag="PXF40_002044"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HDL5803351.1"
                     /translation="MNHYALTNCVIYTGEQVLYQHALVVKEDKIDSIVLEENLPLDLQ
                     KIDLKGANLSAGFIDLQLNGCGGVMFNEEITTRTLEIMQETNLRSGTTSYLPTFITSP
                     DEGVKQAVAVMREYLSKHKNQALGLHLEGPYLSVAKKGVHRPEFIREISPEMLDFLCD
                     NGDVITKITIAAENPTADHIKRFNDAGIIVSIGHSNATFAQTKQRIAEGAAFATHLHN
                     AMSPVSNGREGGVVGAVLDSDIYTGIICDGLHVEWGNIRIAKKAKGDKLVIVSDAVAA
                     AGSDIESFIFVGKKVTVKDGKCYDEFGALGGAAITMIESIRNVVQHCDISLNEAIRMS
                     TLYPAKAIGVEETLGSLEAGKIANLAIFDNQFEVKATAVNGQLQWH"
     gene            2177..2491
                     /locus_tag="PXF40_002045"
     CDS             2177..2491
                     /locus_tag="PXF40_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HDL5803352.1"
                     /translation="MQFKDYLATFPTIDHLAGLNVINSGEVIQHIPAIEGKLGSLKLY
                     NALFAKFDGKLTASAAKQGLEWFAEHVEDAKNNVGKHPNIDLLFRVIEQDLSLSLEPI
                     VK"
     gene            complement(2570..3760)
                     /locus_tag="PXF40_002046"
     CDS             complement(2570..3760)
                     /locus_tag="PXF40_002046"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HDL5803353.1"
                     /translation="MTQAIESVLAELKRGVENIYSEEDLITKLKENRPLRIKLGADPT
                     APDIHLGHTVVLNKLRQFQQFGHEVYFLIGDFTGMVGDPSGKNSTRPPLSREDVLRNA
                     ETYKEQIFKILDPQKTKIVFNSEWLGKLGTEGMIRLASNYTVARMLEREDFKNRFTNQ
                     QPIAIHEFIYPLLQGHDSVELKADVELGGTDQTFNLLVGRELQKSAGQKPQVAMTLPL
                     LVGLDGEKKMSKSLGNYIGVTEAPSEMFGKIMSISDDLMWDWYNLLSFRPLDEIAQLK
                     ADVENGKNPRDVKILLAKEIIARFHDEAAADAAEQEFINRFQKGAIPDEVPEFTFEGE
                     IGLAALLKEAGLVPSTSEAIRSAQQGGVKIDGEKVEDVKQTAQKGTFVYQVGKRKFAR
                     ITVK"
     gene            complement(4123..5427)
                     /locus_tag="PXF40_002047"
     CDS             complement(4123..5427)
                     /locus_tag="PXF40_002047"
                     /EC_number="7.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium ion-translocating decarboxylase subunit
                     beta"
                     /protein_id="HDL5803354.1"
                     /translation="MESIIALFKGMGLMHLELGQAIMIVISLVLLWLAIARKFEPLLL
                     LPIGFGGLMSNIPEAGMAMTALDNLLHSGSAEQLAIIAAKVNSTSLDLHSIKDAIALA
                     APSVQNELEVMAGDMGYTAGVLALFYKVAIGYGVAPLIIFMGVGAMTDFGPLLANPRM
                     LMLGAAAQFGIFATVLGALGLNWLGIIDFTLPQAAAIGIIGGADGPTAIYLASKLAPE
                     LLGAIAVAAYSYMALVPLIQPPIMKALTTEQERKIRMVQLRNVSNREKIIFPIVLLLL
                     VALLLPDAAPLLGMFCFGNLLRTSGVVERLNDTAQNALINIVTIFLGLSVGAKLVADK
                     FLQPQTLGILVLGVIAFGIGTASGVIMAKIMNRFSQHKINPLIGSAGVSAVPMAARVS
                     NKVGQEYDKQNFLLMHAMGPNVAGVIGSAIAAGVMLKYISTM"
     gene            complement(5437..7263)
                     /gene="oadA"
                     /locus_tag="PXF40_002048"
     CDS             complement(5437..7263)
                     /gene="oadA"
                     /locus_tag="PXF40_002048"
                     /EC_number="7.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-extruding oxaloacetate decarboxylase
                     subunit alpha"
                     /protein_id="HDL5803355.1"
                     /translation="MTTQPKKIAITDVVLRDAHQSLFATRLRLDDMLPIASELDNIGY
                     WSLETWGGATFDSCIRFLGEDPWVRLRELKKAMPKTPMQMLLRGQNLLGYRHYADDVV
                     DKFVERSVANGMSVFRVFDALNDPRNMQAALQAVKKHGGHAQGTLSYTTSPVHTLQTW
                     LDVTEQLLEIGVDSLVIKDMSGILTPMAAYELVSEIKKRYDVELHLHCHSTTGMAEMA
                     LLKAIEAGVDGVDTSISSMSGTYGHPATESIVATLQGTPYETGLSIPALEKISAYFRN
                     VRKKYAKFEGQLRGIDSRILVAQVPGGMLTNLESQLKQQNASDKLDLVLQEIPRVRED
                     LGNIPLVTPTSQIVGTQAVMNVLMGERYKTIAKETAGILKGEYGRTPAPVNKALQDRV
                     LEGAEPITDRPADHLPPELEKLVAEVTASAKEKGITLSENMIDDVLIVALFQQVGWKY
                     LENRNNPSAFEPVPSADEAKPAQASAASAPKAQTQSGSAIYTVELEGKAFVVKVSEGG
                     DITNIAPTPATPAPQAVDSAPKSANTLSANAEPVNAPMAGNILKVEVKEGQQVAEGDV
                     LLILEAMKMETQICAAKSGTIQGINVKQGDVVAVNDTLMSIA"
     gene            complement(7303..7557)
                     /locus_tag="PXF40_002049"
     CDS             complement(7303..7557)
                     /locus_tag="PXF40_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxaloacetate decarboxylase subunit gamma"
                     /protein_id="HDL5803356.1"
                     /translation="MAPAELFAEGINLMVAGMGFVMLFLLVLIYAISFISKIINQYFP
                     EPVSIPASKTVPQSPPDDLERLRPVIAAAIAHHRRINGQH"
     gene            complement(7747..8934)
                     /locus_tag="PXF40_002050"
     CDS             complement(7747..8934)
                     /locus_tag="PXF40_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HDL5803357.1"
                     /translation="MSNNNRSALLGAAFLMATSAIGPGFLTQTATFTQTLLASFGFVI
                     LLSILLDIGAQLNIWRIVAVSEKKAQDIANAVLPGAGYFLALLIVMGGLAFNIGNVGG
                     AGLGLNILTGLSPEMGAVVSGAIAVGVFLFHEAGKVMDRFAQIMGFVMIALTIFVAVK
                     ANLPIDDAVVHTFVPEKLDVIAIVTLVGGTVGGYITFAGAHRLLDAGIKGKENLKEVS
                     KSSVSAILIASIMRVVLFLAVLGVVSMGVQLDPKNPAATPFAHVAGDVGLMIFGVVIW
                     AASITSVIGAAYTSVSFITSFSPFIEKHKNCFIVAFIVVSTAVLATIGRPAQVLVFVG
                     TLNGLILPISLGLILLAAHKTKIVGDYKHPVWMTVSGAIVVILMAVLSAMTLSKYISG
                     LMA"
     gene            complement(9209..9946)
                     /gene="pxpA"
                     /locus_tag="PXF40_002051"
     CDS             complement(9209..9946)
                     /gene="pxpA"
                     /locus_tag="PXF40_002051"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HDL5803358.1"
                     /translation="MNHVDLNVDLAEGCGNDHSLLQLVTSANVCCGLHAGDYNEMRKA
                     INWAKENSVRVGAHPSFPDRENFGRTNMQLPDDELKACLLYQLGAAKALCDAENMPMS
                     YVKPHGALYNMAAKDPHLATLIANTVKQFDPNLKLMGLSGSLMLSIAEQHGLETISEV
                     FADRHYLADGSLVPRTRDDAMVESDDEAISQVLQMVLDGTVPTVDGGNVAIKADSICL
                     HGDGEHAVVFAERIKKELQAKGILVKA"
     gene            complement(9933..10862)
                     /locus_tag="PXF40_002052"
     CDS             complement(9933..10862)
                     /locus_tag="PXF40_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HDL5803359.1"
                     /translation="MIYIEIIQGFAHIQDLGRYGYRHLGVSHGGAMDSLALQAGNLLL
                     KNANNAPAIELTLGGMRITFDCDTPFCLTGALVEAELDGTPVFSYYRYTANARQTLTI
                     KRIVLGNYAYLCVAGGFLVPQVLGSASTALKAQFGGFQGRMLKAGDNIATGRRDSRLS
                     LMSIEPIDFTSRIRATASSEYEAFTADSRERFWQQGWQLQNNSNRMGYRFAEKALELT
                     ASLEMLSYAAPSGTVQVPPDGQPIVLMADAQTTGGYPKIACIIQADLGRLAQNPFGST
                     VQFEQVSREQAVEIYQKDQNYLETIRRKANESR"
     gene            complement(10859..11506)
                     /gene="pxpB"
                     /locus_tag="PXF40_002053"
     CDS             complement(10859..11506)
                     /gene="pxpB"
                     /locus_tag="PXF40_002053"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HDL5803360.1"
                     /translation="MLTIHHTSEHSLLCLAEPPAELAKQQQIWRVAEQARALDGVLEV
                     VVGMNNFTLFHAIGTDSTRLIQAVQQLWENDQAQAAQSPRLIEIPVHYGGEFGEDLFE
                     VAQFHNTTPEEIIRRHTEPTYTVFMIGFQPGFPYLNGLPQNLHTPRRNVPRTKVPAGS
                     VGIGGRQTGIYPFTSPGGWQLLGRTELPLFDIQHNPPTLLTAGDNVRFVAESITL"
     gene            complement(11600..12424)
                     /locus_tag="PXF40_002054"
     CDS             complement(11600..12424)
                     /locus_tag="PXF40_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HDL5803361.1"
                     /translation="MKKLLLFLLFIGNPIFAKSPELMLVEQYQDQDISGWVMSEKLDG
                     VRGFWDGQQLISRQGYPLNPPDYFIQDFPPFAIDGELFSERGKFEEISSIVRSAQPKG
                     WHKLKLQVFDVPNAQGNLIERLATLENYLKQHPTLHIAIIEQIPIKDKAHLQQFYQSV
                     LEQGGEGVIVRNPNAGYIQGRSAQILKIKPVLDEECTVVAHHKGKGKYTDKLGAITCE
                     NQRGRFRIGSGFKDKERENPPPIGSIITYKYRGVTESGKPRFATFWRIRNDQISEN"
     gene            complement(12558..13382)
                     /locus_tag="PXF40_002055"
     CDS             complement(12558..13382)
                     /locus_tag="PXF40_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803362.1"
                     /translation="MEHFIGLGVAGNFAGHLEQAGEEADFAKVKTVEAVQPKAIFPFY
                     VPAENLGDYQFLSTYPLSNTAINFPSDADNLQIEPEVALICEIGYQDQQVVSLTPTHF
                     AAYNDCSIRRPNANKICEKKNWGASSKGLSAIHLPLDNFNKGGTLDNYNIACFHKRNG
                     ELNTYGIDSPAVEYSYFHQKLLDWIVERMNNQPDEGPMNNISEMLKQANYPTKAIISI
                     GATRYTPFGESNLLQVGDVSMVVVYNVKKYSHSQIEEMAKLETFSEDISALIQTVR"
BASE COUNT         3706 a         2995 c         3038 g         3799 t
ORIGIN      
        1 tagaaattga agttgtattt cattaaaata ataaaaaatg aagtgattta ttcagaattg
       61 atatttaagg agagactatg cgtttaattc cgttagaaac tgatcacgat gtgagtgttt
      121 gggctgctcg ttatattgtt gatcgtatca atgcattcca accaaccaaa gaaaaacctt
      181 ttgtgcttgg cttaccaacc ggcggtacgc ctgaaaaaac ctataaagaa ttaattaaat
      241 tatatcaagc tggtgaagtg agctttaaaa atgtggtgac tttcaatatg gacgaatacg
      301 tcggcttacc taaggaacac cctgaaagct accacagttt tatgttcaag cacttttttg
      361 accacgttga tattccgctt gagaatatca atatcctcaa cggtatggcg gaagacgtga
      421 atgcagaatg cgaacgttat gaagaaaaaa tccgttttta tggtaaaatc catctgttta
      481 tgggtggggt cggtgtggat gggcatattg cgtttaatga gcctgcatct tcgctttctt
      541 cccgcactcg aattaaaacg cttaccgaag atactcgcat tgcaaactca cgtttcttta
      601 acaatgacgt aagccaagtg ccgaaatttg ctttaaccgt tggggttggt acgttgcttg
      661 atgccgaaga agtgatgatc ttagtgaccg gccataacaa agccttagca ttacaggcgt
      721 gtgtggaagg ggcggtaaat catctttgga ccatcagttg cttacaatta catcgccgtg
      781 gtatagtggt gtgtgatgag ccggcaaccc aagagctgaa agttaaaaca gttaagtatt
      841 tcaaagagtt agagaaaaac gtagctcgct aattctgatt ttacaagcgg ttaattttgt
      901 aatatttttt acaaaaacga ccgcctgtta gcatttaaag agaagagaga aaatgaacca
      961 ttatgcctta acaaactgtg tgatttacac cggtgaacaa gtgctttacc aacacgcatt
     1021 agtggtgaaa gaagataaaa tcgactccat tgttttggaa gaaaatttac cgctggatct
     1081 gcaaaaaatc gacctaaaag gagcgaatct ttcagccggt tttattgact tgcaactgaa
     1141 cggctgcggt ggggtgatgt ttaatgaaga aatcactacc cgcactttag aaattatgca
     1201 ggaaaccaat ctgcgttcag gcacaaccag ctatttaccg acttttatta cctcgcctga
     1261 tgagggagtg aaacaagcgg tggcggtaat gcgtgagtat ttgtcgaaac acaaaaacca
     1321 agcactcggc ttgcatttgg aaggacctta tctaagtgtg gcaaagaaag gagtacaccg
     1381 tccggaattt atccgtgaaa tcagccctga aatgttagat ttcttatgcg ataacggcga
     1441 tgtaattacg aaaatcacga ttgcagcaga aaacccgacc gcagaccata tcaaacgctt
     1501 taatgatgca ggaattattg tatctatcgg gcattccaat gccacttttg ctcaaaccaa
     1561 acagcgaatt gccgaagggg cagcgtttgc tacgcattta cacaatgcaa tgtcgccggt
     1621 cagcaacggg cgtgaaggcg gtgtagtagg ggcggtgttg gatagcgata tttacaccgg
     1681 cattatttgc gatggcttgc acgttgaatg gggcaacatt cgcattgcca aaaaagccaa
     1741 aggcgataaa ttagtgattg tcagcgatgc tgttgctgcc gcaggaagtg atattgagtc
     1801 gtttattttt gtcggtaaaa aagtcacggt gaaagatggc aaatgctacg atgaattcgg
     1861 agcattgggc ggtgcggcaa tcacgatgat cgaatccatt cgcaacgtag tgcaacattg
     1921 cgatattagc ctgaatgaag caatccgaat gagtaccctt tacccggcaa aagcgattgg
     1981 ggtagaggaa acactcggct cacttgaagc cggcaaaatt gccaaccttg cgattttcga
     2041 taatcaattt gaagtaaaag cgactgctgt aaacgggcaa ttacagtggc attaattttg
     2101 ctacaaattc taagcataac agcatataat ccaaaggcag gcattgtgtc tgccttttat
     2161 ttatagggag aataacatgc aatttaaaga ttacttagcc acttttccaa ctattgatca
     2221 tctagccggc ttaaacgtga taaatagcgg tgaagtgatt caacatattc ctgcgattga
     2281 aggtaaatta ggttcactaa aactttacaa tgcactgttt gcgaaatttg atgggaaatt
     2341 aaccgctagt gcagcaaaac aagggttgga atggtttgcc gaacacgttg aagatgcgaa
     2401 aaataatgtg ggtaagcacc cgaatattga tctattattt agggtaattg agcaagattt
     2461 atctttaagt ttagagccga ttgttaaata agattgcact agtgaaaaat aacaagcggt
     2521 cattatctgc aaaatttttg caaataatga ctgcttgtgt ttaagaggct tatttcacgg
     2581 taatgcgtgc aaatttgcgt ttgccgactt ggtaaacaaa agtgcctttt tgagcagttt
     2641 gtttcacatc ttccactttt tcaccatcaa ttttaacccc gccttgttgg gctgagcgaa
     2701 ttgcctctga agtggacggt actaagccgg cttctttcag tagagccgct aggccgattt
     2761 caccctcaaa ggtaaattca ggcacttcat caggaattgc ccctttttgg aaacggttga
     2821 taaactcttg ctctgctgca tctgctgccg cttcatcgtg gaaacgagcg ataatttctt
     2881 ttgccagtag aattttcaca tcacgcgggt ttttgccatt ttcaacatcc gcttttaatt
     2941 gtgcaatttc gtctaatgga cggaatgaga gcaggttgta ccaatcccac attaaatcgt
     3001 ctgaaatcga cataattttg ccgaacattt cgcttggagc ttcagttaca ccaatgtagt
     3061 tgccgagaga tttcgacatt tttttctcgc cgtctaagcc gacaagtagt gggagtgtca
     3121 ttgccacttg tggtttttga ccggctgatt tttgtaactc acgtccaact aacaagttaa
     3181 aggtttggtc tgtaccacct aattccacgt cagctttcag ttctaccgag tcgtgacctt
     3241 gtagtagcgg ataaataaat tcgtggattg cgatcggttg ttggttcgtg aaacggtttt
     3301 tgaaatcttc acgttctaac attcgagcaa cggtgtagtt ggaggctaag cggatcatac
     3361 cttccgtacc taacttgcct aaccattcgg agttgaatac gatcttggtt ttttgtggat
     3421 ctaaaatttt gaagatctgc tctttatagg tttcggcatt gcgtaacacg tcttcacggc
     3481 taagtggcgg acgggtagag ttttttcctg atggatcgcc taccataccg gtgaaatcac
     3541 cgattaagaa atagacttcg tgtccgaatt gttggaattg acgaagtttg ttcagcacaa
     3601 cagtatgacc taagtgaata tccggtgcag ttgggtctgc ccctaattta atacgcaatg
     3661 ggcggttttc ttttaatttg gtgattaaat cttcttctga ataaatattt tccacgccac
     3721 gtttaagttc ggcaaggact gattcgatag cttgagtcat ttatcttcct tttagtcttg
     3781 aatataaaaa atggatctat tatagcggta tgaattgaaa ttgataggct ataggcgaaa
     3841 aaaaacgccg tattttgtgg gggaatacgg cgtaaagagt tggagtgatt acctattatt
     3901 tttgaagtga tttaatgata atgattatca tctgttaagt caatactttt tttgaaaatt
     3961 ttcaataaga attattctca tcaattaagt aagatggata ctacggcaat tagtgaagaa
     4021 tgtacagcgg aattttcgta ttgtaagagt gttggtaagc ggtattttta gaaaaaacct
     4081 ccgagagcgg ttatttttcg gaggtttttt gcaaatgagg atttacatcg ttgaaatgta
     4141 tttcaacatc acccccgctg caatcgcaga gccaatcacg ccggcaacgt ttgggcccat
     4201 tgcgtgcatt aacaagaagt tttgtttatc gtactcttgt ccgactttgt ttgatacccg
     4261 tgcagccatc ggcacggcag aaacacccgc tgagccgata agtgggttga ttttgtgctg
     4321 actaaagcgg ttcattattt tcgccataat cacaccgctt gcagtgccga tcccaaaggc
     4381 aatcacgccc aatactaaaa tgcctagtgt ttgcggttgt aagaatttgt ctgcgaccaa
     4441 ttttgccccc accgataacc ctaagaaaat cgtcacgata ttgattaacg cattttgggc
     4501 ggtgtcgttt aagcgttcta ctacgccact ggttcgcagt aagttgccaa agcagaacat
     4561 tcccaataac ggtgcagcat ccggcagtaa gagtgccact aataatagca acacgatagg
     4621 gaaaataatt ttctcacggt tgcttacatt acggagctga accattcgga ttttacgttc
     4681 ttgctcggtg gttaaggctt tcataatcgg cggctgaatc agtggcacta acgccatata
     4741 agaataagcc gctaccgcaa tcgcacctaa taattcaggg gcaagtttgc tggcaagata
     4801 aatcgcggtc gggccatctg ccccgccgat aatcccaatc gcagcggctt gtggcaatgt
     4861 gaagtcgata atgcctaacc agtttagccc taatgcaccc agtacggtag caaaaatccc
     4921 aaattgagcc gcagccccaa gcattaacat tcgagggttg gcaagtaaag ggccgaaatc
     4981 agtcatcgcc ccgacaccca taaagataat aagcggagca acgccgtagc cgatagcaac
     5041 tttatagaat aatgccaaca caccggcggt atagcccata tcgccagcca ttacttcaag
     5101 ctcattttga acagagggag cagccagtgc gatggcatct ttaatcgaat gcagatcaag
     5161 gcttgtacta tttaccttag cagcaataat tgccagttgc tcggcagaac cgctgtggag
     5221 taaattgtct aatgccgtca ttgccatacc tgcttccgga atgtttgaca tcaaaccacc
     5281 aaagccaata ggcagtagta aaagcggttc gaattttcgg gcgatggcaa gccaaagcaa
     5341 cactaaactg atgacaatca taatcgcttg ccccagttct aaatgcatta gccccatacc
     5401 tttaaaaagt gcaataatac tttccatacc ggactcctag gcaatactca ttaaagtatc
     5461 atttaccgcc acaacatcgc cttgtttgac attaatgcct tgaatcgtgc cggattttgc
     5521 cgcacaaatt tgggtttcca ttttcattgc ttcaagaatc agtaacacat cgccttcagc
     5581 aacttgttgc ccctctttca cttccacttt caaaatgttc cctgccattg gagcattcac
     5641 cggttcggca ttggctgata gcgtatttgc agattttggt gcagaatcga ccgcttgcgg
     5701 agccggtgtt gctggtgttg gagcgatatt ggttatatcg ccaccttcac tcaccttcac
     5761 cacaaaggct ttgccttcaa gctcaacggt ataaatggct gaaccggatt gtgtttgggc
     5821 ttttggtgca gaagcagcgg aggcttgtgc cggttttgct tcatcagcac ttggcactgg
     5881 ctcaaaggca gacggattat tgcggttttc caaatatttc cagcccactt gttggaagag
     5941 tgccacaatc aatacatcat caatcatgtt ttcagatagc gtaatgcctt tttcttttgc
     6001 acttgcagtc acttctgcca ctaatttttc cagttccggc ggaagatgat cggctgggcg
     6061 gtcggtaatc ggctctgctc cctcaagcac tctgtcttgc aaggctttgt ttaccggtgc
     6121 cggtgtgcga ccatattcgc cttttaaaat acctgcagtt tctttggcga tagttttata
     6181 acgttcgccc attaatacgt tcatcaccgc ttgtgtgccg acaatttgtg aggttggtgt
     6241 caccaacgga atattgccta aatcttcacg cacacgagga atttcttgta aaaccaagtc
     6301 taatttatcc gacgcatttt gttgcttgag ttggctttcg aggttggtca gcatgccacc
     6361 cggcacttgg gcaaccaaaa tacggctatc tataccacgg agctgtcctt caaattttgc
     6421 atatttttta cgcacgttac ggaagtaggc agagattttc tccagagctg gaatgctcaa
     6481 gccggtttca tacggcgtgc cttgaagtgt ggcgacaata gactcggttg ccgggtgacc
     6541 gtaagtgccg gacattgatg aaatggaggt atcgacacca tcgacaccgg cttcaatcgc
     6601 tttgagcaac gccatttcag ccataccggt ggttgaatgg caatggagat gtagctcaac
     6661 gtcgtagcgt tttttaattt cgctgactaa ttcataggct gccattgggg ttaaaatgcc
     6721 cgacatatct ttgatcacca acgaatccac gccaatttcc aataattgct cggttacatc
     6781 caaccacgtt tgtagggtat gaacagggct ggtggtgtaa ctcaaagtac cttgtgcgtg
     6841 cccgccgtgt tttttgaccg cttgtaatgc ggcttgcata ttgcgagggt cgttgagggc
     6901 atcaaataca cggaacacac tcataccgtt tgccaccgaa cgctcgacaa atttatctac
     6961 cacatcgtcg gcataatgac gataacccaa taagttttgc ccacgtagca gcatttgcat
     7021 tggggttttc ggcattgctt ttttcagctc acgtaaacgc acccacggat cttcgcctaa
     7081 aaaacgaata caactgtcaa aagttgcccc gccccaagtt tctaacgacc aatagccgat
     7141 attatccagc tcggaggcaa tcggtaacat atcgtctaag cgtaaacgag tcgcaaaaag
     7201 ggattggtgt gcatcacgca aaaccacatc ggtaatcgca atttttttcg gttgagttgt
     7261 cataatcaaa ttccttctaa ttattttatt tttgaaatct tgttaatgtt gcccgttaat
     7321 tcgacgatga tgagcaatcg cagcggcaat cacagggcgt aaacgctcta aatcatctgg
     7381 gggagattga ggcacagttt tagaggctgg aatagaaaca ggttcgggga aatattgatt
     7441 gataatcttg gaaataaagc tgatggcata aattaaaacc agcaggaaca gcataacaaa
     7501 tcccattccg gctaccatta aatttatacc ttccgcaaag agttctgcag gtgccataat
     7561 ttatccttaa aatgtagaaa tgatgaagaa aatgtagaaa aaattcagat ttatttcaaa
     7621 ttatttagcc tcaaaatgag tggtagatca caaactttaa acgcaagcgg tcagatttta
     7681 caaatttttt acaagagtag ttaaaatttg caaaacctga ccttaggtta gcttgaagct
     7741 aagtcgttat gccattagcc ccgaaatata ttttgaaagg gtcattgcac ttagcaccgc
     7801 cattagaatc accacaatcg cccctgaaac ggtcatccac acagggtgtt tgtagtcgcc
     7861 cacaatcttg gttttgtgag ctgccagcag aattaacccg agggaaatcg gtagaattaa
     7921 gccgttaagc gtccctacaa acaccaagac ttgtgccggt ctgccgatgg ttgccagcac
     7981 ggcggttgaa accacaataa aggcgacaat gaaacagttt ttgtgttttt cgataaatgg
     8041 cgagaatgaa gtaatgaagg aaaccgaggt ataagccgcc ccaatcacag aggtaatgga
     8101 ggctgcccaa atcaccacgc cgaagatcat caaaccgaca tcgccggcaa cgtgggcaaa
     8161 tggggtagcc gcagggtttt tcggatcaag ttgcacgccc attgacacca cgcccagcac
     8221 cgctaaaaac agtaccacac gcataattga ggcgattaaa atggctgaca ccgagctttt
     8281 gctcacctct tttaaattct ctttgccttt aatgcctgca tcaagcaaac ggtgcgcacc
     8341 agcaaaggtg atgtatccac caacagttcc gcccactagc gtgacaatcg caatcacgtc
     8401 taatttttcc ggcacaaagg tatgcaccac cgcatcgtcg attggcagat tggcttttac
     8461 ggcaacgaag atggttaaag caatcatcac aaagcccata atttgtgcaa atctgtccat
     8521 cactttacca gcttcatgga acaggaacac gcccacggca atcgcaccgc tgaccaccgc
     8581 acccatttca ggggaaagtc cggtgagaat gtttagccct aaacctgcac cgcccacgtt
     8641 gccgatatta aaggctaaac cgcccatcac gataagcaga gccagaaagt aacctgcccc
     8701 cggcaatacg gcattggcga tgtcttgagc tttcttttcc gatactgcta caattcgcca
     8761 aatattcagt tgagcaccga tatcaagcaa gatcgagagt aagatcacaa agccgaagct
     8821 ggcaagtagg gtttgggtga aggtggctgt ttgggttaag aaccccggcc cgatggcgga
     8881 ggtcgccatt aaaaatgctg ccccgagtag ggcgctacgg ttgttgtttg acattgtgtt
     8941 ggttcctttt ttgttgttaa tgagtcatta ttcgtggatt tatcatggta atattcccct
     9001 ctttagcaaa gaggggttag gggagatttg gcagtagaac tcatcgaagt gagagagtta
     9061 ataatgctca atttaacctc ttgaaattac ttattttctc cgtaaatcgc ttctgtcaaa
     9121 tctcccccag cccctctttt ctaaagaggg gagttcgatc tccaagagtt ttatttctgg
     9181 ttttccgtcc attttgacta aaacaggatc aggctttcac caaaatcccc tttgcctgta
     9241 actctttttt aattcgctcg gcaaatacca cggcgtgttc gccgtcaccg tgtaagcaaa
     9301 tgctgtcggc tttaatcgcc acattaccac catcaacggt tggtacagtg ccgtctaaca
     9361 ccatttgcaa gacttggctg atcgcttcat catcgctttc taccattgca tcatcacggg
     9421 tgcgaggcac gagcgagccg tcagctaaat agtggcggtc ggcaaagact tcggaaatgg
     9481 tttccaaacc gtgctgctcg gcaatgctca acatcaggct gccggataag cccatcagtt
     9541 tgaggttggg atcgaactgt ttgaccgtat tggcgataag ggtggcaagg tgagggtctt
     9601 tggcggccat attgtataaa gcgccgtgcg gtttaacgta gctcatcggc atattttccg
     9661 catcacataa ggctttggcg gctcccagtt ggtagagcag acaggcttta agttcatcat
     9721 cgggcagttg catattggta cgcccaaagt tttccctatc tggaaaactc gggtgagcgc
     9781 caactcgcac gctgttttcc ttcgcccagt taatcgcttt acgcatttca ttgtaatcac
     9841 cggcgtgcaa gccacagcag acattcgccg aagtaacgag ctgtaataat gaatgatcgt
     9901 tgccacaacc ttcggcaaga tcgacattta aatcaacgtg attcattcgc ttttctccga
     9961 attgtttcca aataattttg atctttttga taaatttcga ccgcttgttc acggcttact
    10021 tgctcaaatt gcaccgttga gccgaacgga ttttgtgcca accgcccgag atcggcctga
    10081 ataatgcagg caattttcgg ataaccaccg gtggtttggg catctgccat cagcacaatc
    10141 ggctggccgt ccggcggcac ttgcaccgta ccactcgggg ctgcgtagga gagcatttca
    10201 agggaagcgg tcaattccaa cgctttttct gcaaaacggt agcccatacg gttgctgttg
    10261 ttttgcagtt gccacccttg ttgccaaaag cgttcacggc tatctgcggt aaaggcttca
    10321 tattcgctcg aagcggttgc ccgaatgcgt gaggtgaaat caatcggctc aatcgacatc
    10381 aaagaaagtc ggctgtctct gcggcctgtg gcgatgttat cgccggcttt taacattctg
    10441 ccttgaaaac cgccaaattg agctttgaga gcggtacttg ccgaacctaa cacctgcggc
    10501 accagaaaac cgcctgccac gcataaatag gcgtaattgc cgagaacaat ccgttttatc
    10561 gtcagcgttt gacgggcgtt ggcagtgtag cggtaatagg aaaaaaccgg cgtgccgtcc
    10621 agctccgcct ccaccaatgc accggtgagg caaaatggcg tgtcgcaatc aaaggtaatc
    10681 cgcattccgc caagggtaag ttcaatcgca ggtgcattat ttgcattttt taacaataaa
    10741 ttacccgctt gtaaggcaag gctgtccatc gcaccgccgt ggctcacgcc taaatggcga
    10801 taaccataac gccctaaatc ttgaatgtgg gcaaaaccct gtattatttc gatataaatc
    10861 atagcgttat actctccgcc acaaatctaa cattatcgcc ggctgtaagt agcgttggcg
    10921 gattgtgttg aatatcaaac aacggtaact cggttcgtcc taacagttgc cagccacctg
    10981 gtgaggtaaa gggataaatg cctgtttgcc tgccgccgat gccgaccgaa ccggcaggga
    11041 ctttggtgcg aggcacgttt cggcgtgggg tgtgtaaatt ttgcggtaag ccgttgaggt
    11101 aaggaaagcc gggttgaaag ccgatcataa acacggtgta agtcggttcg gtatgacggc
    11161 ggataatctc ttcgggagtg gtattgtgga attgggcgac ttcaaacaga tcttcgccaa
    11221 attcaccgcc gtaatggaca gggatttcaa tcaggcgtgg ggattgtgcg gcttgggctt
    11281 ggtcgttttc ccagagttgt tgaaccgctt ggataaggcg tgtgctatcg gtgccaatgg
    11341 cgtgaaatag ggtaaaattg ttcattccta ccaccacttc caacacgcca tctaaggctc
    11401 ttgcctgttc tgccacccgc caaatctgtt gctgtttggc aagctctgca ggcggttcgg
    11461 ctaagcagag cagggaatgt tcgctggtat gatgaatcgt cagcataatt gccctcaaat
    11521 tgttacaaaa aggtaacaac tttttacgct gatatatcca gactgtcaat tttattttgt
    11581 tgaaaatgtg aaatagctct taattttcag aaatttgatc atttcttatt cgccaaaacg
    11641 ttgcaaatct gggcttgcct gattctgtga cacctcgata tttataggta atgattgagc
    11701 caatcggtgg cggattttct cgttctttat ctttaaaacc gctgccaatc cgaaaacgtc
    11761 cacgttgatt ttcacaagtg attgccccga gtttatcggt atatttccct ttgcctttat
    11821 gatgggcaac cacagtgcat tcctcatcta aaaccggttt gattttcaaa atttgggcag
    11881 aacgaccttg aatatagcct gcattcgggt tgcgaacgat aaccccttcg ccaccttgtt
    11941 ccagcacaga ttggtaaaat tgttgaaggt gggctttatc tttaatcgga atttgctcaa
    12001 taatagcgat atggagcgtt ggatgttgct tcagataatt ctctaaggtc gccagccgtt
    12061 caatcaaatt cccttgtgca tttggcacat cgaacacctg taatttcagc ttgtgccaac
    12121 ctttgggctg agcggaacgc acaatgcttg aaatttcctc aaatttgccc cgttcgctaa
    12181 acagttcgcc gtcaatcgca aaaggaggga aatcttgaat aaaatagtcg ggtggattga
    12241 gcggataacc ttggcggctg atgagctgtt gaccgtccca aaagcctcgc acgccatcga
    12301 gtttttctga cattacccag ccactgatgt cttgatcttg atattgctca acgagcatta
    12361 actcgggcga tttggcaaaa atagggttac caatgaagag taggaataag agcagttttt
    12421 tcatagtctc tccgaaatag tgcctccgaa tatgcaaggc actataaagg aaagcgtgca
    12481 aacagtcaga aatgaatctc aatttttcga cgcagatcgc aaaattttcc gaaaaactga
    12541 tcgcttgagt gagaaattta acgtactgtt tgaattaaag cagaaatatc ctcgctaaag
    12601 gtttccaact tcgccatttc ttcaatttgg ctatgagaat atttcttcac attgtaaacg
    12661 accaccatac ttacatcacc tacttgcaat aaattacttt cgccaaaagg cgtgtagcgt
    12721 gttgccccaa tgctgataat cgctttagtt gggtagtttg cctgttttaa catttcggaa
    12781 atgttgttca tcggaccttc atcgggctga ttattcattc tctctacaat ccaatcgagc
    12841 aatttttgat ggaaatagct gtactccacc gcagggctgt cgatgccgta ggtattcagc
    12901 tcgccattac gtttatggaa acaagcgatg ttgtaattat ccagcgtgcc gcctttgttg
    12961 aagttatcta acggaagatg aattgccgaa agccctttag acgaagcccc ccagtttttc
    13021 ttttcacaga ttttattcgc attcggacgg cggatagagc agtcattgta agccgcaaaa
    13081 tgggttggcg tgagcgaaac cacttgctga tcttggtagc caatttcaca aattaacgcc
    13141 acttcaggct caatttgcag attatcagca tcactcggga aattaatcgc agtatttgaa
    13201 agcggatagg tggataaaaa ctgataatcc cccaaatttt ccgccggcac ataaaacggg
    13261 aaaatcgcct ttggctgcac tgcttccact gttttcactt tcgcaaaatc cgcctcctct
    13321 ccggcttgtt ctaaatgtcc agcaaaattg ccggccacgc ctaaaccgat aaagtgttcc
    13381 ataatctact ccttaattgg taaaagttgg ataaaatttt accgcttgta accaaaaatt
    13441 gcgaatgttt attttgatct gattgataga aaattattga attgagatta aatttagcca
    13501 tattttgaac ataaaattag cgctttgtta taaaaaca
//
LOCUS       DANMCL010000080        13486 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.080, whole genome shotgun sequence.
ACCESSION   DANMCL010000080 DANMCL010000000
VERSION     DANMCL010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13486
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.080"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            484..1128
                     /gene="rppH"
                     /locus_tag="PXF40_002056"
     CDS             484..1128
                     /gene="rppH"
                     /locus_tag="PXF40_002056"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HDL5803363.1"
                     /translation="MIDFDGYRPNVGIVICNKHGQVLWAKRFGQNSWQFPQGGINEGE
                     NIEAAMYRELYEEVGLSKKDVRLLWASKYWLKYKLPKRLVRNEGSGPVCIGQKQRWFL
                     LQLIGDESLINLKTTKNPEFDGWRWVSFWYPVRQVVSFKRDVYRKAMKEFAQVLQNNI
                     QKATDDKTGEKPRIERGETSPHTYKKTSQDSAKAYKREARKPYRPWHQHNQKGK"
     gene            1130..1918
                     /locus_tag="PXF40_002057"
     CDS             1130..1918
                     /locus_tag="PXF40_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HDL5803364.1"
                     /translation="MTILLSCLFLGVFVGFLAGLFGIGGGLIIVPSLVFLLPMAGVPP
                     EYIMSTALGTSFSTIIITAFASAQRHHKLGNVDIQTSKYFIPALMVSVFLSGLVVSRL
                     DPQLMSRIFAVMVLYLAGKMIFSIKRAPKNKPLTVQTTIIGGSIIGALASMAGIAGGA
                     FIVPFLNDRGLEMKRAIGTSSFCGAFLGLSGTISFIVSGWGLEGMPDYSLGYVYLPAL
                     FGITATSFFTSKMGASAANALPVPMLKKAFAVLLVCIAINMFLK"
     gene            1926..2723
                     /gene="lgt"
                     /locus_tag="PXF40_002058"
     CDS             1926..2723
                     /gene="lgt"
                     /locus_tag="PXF40_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HDL5803365.1"
                     /translation="MNEQFIQFPQISPIVFEIGPIALRWYGLMYLAGFAFAYWLGMRR
                     AKNSNGVWTTEQVDSLVYTCFWGVVLGGRIGDVFFYSFDRFLQDPLYLFRIWEGGMSF
                     HGGLIGVIVAMIWVSYRQKRNFWQTADFIAPLVPFGLGMGRIGNFINDELWGRVTDVP
                     WAVLFPSGGYLPRHPSQLYEAFLEGVVLLFILNWFIQKPRPAGAVSGLFLIGYGTFRF
                     IVEYFREIDHNVNTTADLITRGQLLSLPMIIGGILIMAWAYKVNKVK"
     gene            2810..3478
                     /locus_tag="PXF40_002059"
     CDS             2810..3478
                     /locus_tag="PXF40_002059"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HDL5803366.1"
                     /translation="MSKKYKVIGFDLDGTLINTLPDLTLVANSMFLEAGLPTVTQEKV
                     LTWIGKGADIFFQNAVAHTGRIFQADELVKMRVSFDKYYATYVCEESTLFPNVKETLE
                     ILKANDYPLVVITNKPTKLVEPVLSAFGIYHLFDETLGGQSLPKIKPHPDPMFFICEK
                     FGITPSELLFVGDSENDVIAAKAAGCDVVGLTYGYNYNVPIEQSNPTFVTSEFKDVLK
                     IVGL"
     gene            3548..3808
                     /locus_tag="PXF40_002060"
     CDS             3548..3808
                     /locus_tag="PXF40_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HDL5803367.1"
                     /translation="MPTIALRQVGGSVAMVIPPAFLEALKLSVGSKVDLSLNDNQLVI
                     NPARPKVKYSLEELLRQSDFEAARNEESQSWLSEPAIGKEIL"
     gene            3805..4137
                     /locus_tag="PXF40_002061"
     CDS             3805..4137
                     /locus_tag="PXF40_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HDL5803368.1"
                     /translation="MKRGDIYWLDLDPTLGHEQSGFRPVVIVSATAFNLASKLPVVVP
                     ITNGGAFAERLGFAVSLKDAGLKTTGIIRCDQPRTVDIAQRHGKFIEALPESLLDEIM
                     ARVSVIFE"
     gene            4264..5295
                     /gene="trpS"
                     /locus_tag="PXF40_002062"
     CDS             4264..5295
                     /gene="trpS"
                     /locus_tag="PXF40_002062"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HDL5803369.1"
                     /translation="MSKPIVFSGVQPSGELTIGNYLGALRNWVKMQDDYDCVYCIVDQ
                     HAITVRQDPESLRKSTLDVLALYLACGIDPNKSTIFIQSHVPEHAQLAWVLNCYTYFG
                     EMGRMTQFKDKSARYEENVNVGLFTYPVLMAADILLYQANQVPVGDDQKQHLEITRDI
                     ANRFNALYGKKDSEGNLIEPVFAVPEVFIAKSGARVMSLLEPTKKMSKSDDNRNNVIG
                     LLEDPKAVAKKIKRAMTDGDEPPVVRYDVQNKAGVSNLLDILSAITGKTIAELETEFE
                     GKMYGHLKTEVADKVSELLTNLQERYHHYRQDEALLEKIYREGAEKARAQAKATLDKV
                     YELVGFVRY"
     gene            complement(5359..6114)
                     /locus_tag="PXF40_002063"
     CDS             complement(5359..6114)
                     /locus_tag="PXF40_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HDL5803370.1"
                     /translation="MKFIKKLSYSVFLATVITACATTESINQEAAQSYAQVKTQARQQ
                     NAIDNSSATAKRIHTVFHKMKPYAERANQTGVPFHWEITVLKSDELNAWAMPGGKMAF
                     YTGLVERLNLSNDEIAVVMGHEMAHALKEHGKSDRTVSAITSIVGAIADVAVTASTGV
                     STEGLLSTGVDLIATKPFSRSQETEADEVGLILMAESGYNPSAAPNVWVKMSKANGDS
                     GLSIFSTHPSNADRQENLARLVPEAMKIYNARK"
     gene            complement(6170..6697)
                     /gene="ppa"
                     /locus_tag="PXF40_002064"
     CDS             complement(6170..6697)
                     /gene="ppa"
                     /locus_tag="PXF40_002064"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HDL5803371.1"
                     /translation="MGLELVPAGKELPDDIYVVIEIPANSDPIKYEVDKETGALFVDR
                     FMATAMFYPANYGYVNNTLSSDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGG
                     DAKVVAVPHTKLSKEYDHIKDVGDLPALLKAQIQHFFESYKALEAGKWVKVEGWGDVN
                     EARQEILESFERAKK"
     gene            6914..6989
                     /locus_tag="PXF40_002065"
     tRNA            6914..6989
                     /locus_tag="PXF40_002065"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6947..6949,aa:Lys,seq:ttt)
     gene            7012..7087
                     /locus_tag="PXF40_002066"
     tRNA            7012..7087
                     /locus_tag="PXF40_002066"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7045..7047,aa:Lys,seq:ttt)
     gene            7109..7184
                     /locus_tag="PXF40_002067"
     tRNA            7109..7184
                     /locus_tag="PXF40_002067"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7142..7144,aa:Lys,seq:ttt)
     gene            7277..8311
                     /gene="mltG"
                     /locus_tag="PXF40_002068"
     CDS             7277..8311
                     /gene="mltG"
                     /locus_tag="PXF40_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005613374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HDL5803372.1"
                     /translation="MLKKILIALGLAGVIACGGLFYGYQKLTSLAEHPITVQPNQLFV
                     LEKGVSSQKLAALLEEQGIVTHDDADLIPYLMRLYPELSKFKAGAYSLAGLTTVKDLL
                     AHLSSGKEVQLNVQFIEGKTFKIWREQLAKADYLQHTLQGKSEKEIADLLGIPHEKIE
                     GWIAPDTYNYTPNSTDLALLKRAYQKQKTALEQAWKNRAENLPLATPYEMLILASIVE
                     KETGIATERPQVASVFINRLRNNMRLQTDPTVIYGMGDRYNGNIRRKDLEEATPYNTY
                     QIDGLPPTPIAMPSEASIKAVANPDNTPYLYFVADGTGGHKFSKTLNEHNKAVAEWIQ
                     IERKRKNEQK"
     gene            8322..8942
                     /locus_tag="PXF40_002069"
     CDS             8322..8942
                     /locus_tag="PXF40_002069"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HDL5803373.1"
                     /translation="MRGKFIVIEGLEGAGKTTAHQVILKELEQAGINDVVMTREPGGT
                     PLAEKLRHLIKHETEEAINDKAELLMLYAARVQLVENVIKPALAEGKWVLGDRHDMSS
                     QAYQGGGRKLDRHLLETLKESVLGTFEPDLTIYLDLDPVIGLERARGRGELDRIEQQS
                     LDFFYRTRERYLELTQHNDKAVIINAEQPIEQVTADIQQVIRNWLK"
     gene            8942..9919
                     /locus_tag="PXF40_002070"
     CDS             8942..9919
                     /locus_tag="PXF40_002070"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HDL5803374.1"
                     /translation="MYPWLESTYQQLTDSFLQGRGHHALLFKTDVGLGTDTLIYKVAE
                     WLLCSQKLRHQPCLECKSCLLMQSNNHPDFHILEPIEDKDIGIDQVRELIYKLQNFAQ
                     QGGNTVVYIRGVDRLTEASSNALLKTLEEPRENVYFLLEAPLQATVLATIQSRSQTWV
                     LYAPQASEVMAWLQTQFPAISTDDLEIALRLCHSRPLICKNFIENDRLQQRKTFLQTF
                     WRFYKSHDVFLLFQAFAQEKELILQQLEWLESFFSDALKAKMAISHGWLNPDLQNGIL
                     PFSQQLTTHGLLKGHQILQQTQRDLTEINAVNPELMLLDCLTKLVLVFE"
     gene            10050..10292
                     /locus_tag="PXF40_002071"
     CDS             10050..10292
                     /locus_tag="PXF40_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system ParD family
                     antitoxin"
                     /protein_id="HDL5803375.1"
                     /translation="MARTTSVTLGEPLNDFVNEMVASGRYGSTSEVVRTALRMLEEKE
                     QYLAQLRQAIDDGDASGYATETIDEMMLRVKAELNV"
     gene            10285..10569
                     /locus_tag="PXF40_002072"
     CDS             10285..10569
                     /locus_tag="PXF40_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803376.1"
                     /translation="MYKLSAQALRDQEKLFRYSISQFGVQQTESYFADLKHILNLLAD
                     FPTMGTSAEYIRGGLRMHTHQSHTIYYRIKADHIFIVRILHNQMNHKRYI"
     gene            10574..11362
                     /locus_tag="PXF40_002073"
     CDS             10574..11362
                     /locus_tag="PXF40_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchF/TatD family DNA exonuclease"
                     /protein_id="HDL5803377.1"
                     /translation="MKDLFIIDSHCHLDSLDYETRHKNVDEVIENAKARGVHHFISVC
                     TTVGRFEAMKNLTAHRNDVSLSCGVHPLNVEDEPFDYDKLFQFAQDPKVVAIGETGLD
                     YHYTPETKALQQSLFVQQIEIANKLNKPLIIHSRSARQDTMDMLEQNNAEKCGGVLHC
                     FTEDWAMAKRALDIGFYISISGIITFRNAEELREVVRKVPLDRLLVETDSPYLAPIPY
                     RGKPNQPAYVRETCEYVATLKGVSTEELARITTENVQHLFNIKL"
     gene            11372..11893
                     /locus_tag="PXF40_002074"
     CDS             11372..11893
                     /locus_tag="PXF40_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1523 family protein"
                     /protein_id="HDL5803378.1"
                     /translation="MRAILKYFLILVSLSFFIVLGGAVNYAMPSYEDTVVTGMEVRRM
                     DKDGIISKANPADGEVRDVYFLFTEDPETKKVMVYRNEDTGWGLPPYFKFGSADIQAK
                     AQAYANEKQRVQIKYYGWRINWLNEFRNIVSIKPLEEAETVSKPIMSYVLYAVLAFLF
                     FLSVQFIRGIFKD"
     gene            11968..12669
                     /gene="lpxH"
                     /locus_tag="PXF40_002075"
     CDS             11968..12669
                     /gene="lpxH"
                     /locus_tag="PXF40_002075"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HDL5803379.1"
                     /translation="MTYYFIADLHLNENQPEITHLFLQFMQEKALLAEAVYILGDLFD
                     FWIGDDEQSELISTVKQAIKTLTTSGTKCYFICGNRDFLIGKRFSEQTGMVILPDYHV
                     IDLFGTSTLLCHGDTLCTDDVKYQQFRKKVHQKWRQAIFLMFPLSWRIRIAEKIRSKS
                     KQEKRDKSAEIMDVNAEVTAQIVAKYNTTQLIHGHTHRQAIHQHNGFTRIVLGDWKEN
                     YASILSVTEQGAEFI"
     gene            12666..13456
                     /locus_tag="PXF40_002076"
                     /pseudo
     CDS             12666..13456
                     /locus_tag="PXF40_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618283.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
BASE COUNT         4023 a         2862 c         2796 g         3805 t
ORIGIN      
        1 tacaattgca caaaaagcaa ccaacaaaac aattgattat tcacagattg aaaagatgac
       61 actaactatt tgatttaatt ataatttatg gaaatagcaa aaggctgatt tgagttattc
      121 acgcctaatt tgaaaaacta tcacatcttt atccacaaat ggtggggata actctgcttt
      181 atttgcgaag caaaaattgc cctgcttatt cattttaaaa tttaaactta ttttgacgag
      241 aaaaaacgca acaacttgat ctttatccag atcattgctt aagaaaaaga tcgcattttt
      301 agatctgatt aattgctctg ttttacaacg ttccgcctgt ttatcctcaa cttataccac
      361 ttatattcaa tagttatcca caaagttatt cacaagcggt tatattttat ggtttttttg
      421 caaatcaacc caaagtatga aacaattctc ccattctaga atttttatca attaggtggt
      481 cgagtgatcg atttcgatgg ctaccgccca aatgttggaa tcgttatctg taataagcac
      541 gggcaagttc tgtgggcaaa acggtttggt caaaactctt ggcaatttcc gcaaggtgga
      601 attaatgagg gggaaaacat tgaagcagca atgtaccgtg agctttatga agaggtcggc
      661 ttaagtaaaa aagatgtacg attgctttgg gcgtctaaat attggctaaa atataaactg
      721 ccaaaacgct tggtacgtaa tgaaggctct ggtcctgtct gtatcgggca aaaacagcgt
      781 tggtttctac tgcaattaat cggtgatgaa agcctgatta atttgaaaac cacgaaaaat
      841 ccggagtttg acggctggcg ttgggtcagc ttttggtatc cagtccgcca agtggtctct
      901 tttaaacgag atgtttatcg caaagcgatg aaagagtttg cacaggtttt gcaaaacaat
      961 attcaaaaag cgactgacga taaaaccggt gagaaaccac gcattgagcg tggcgagact
     1021 tcgccccata cttataaaaa aacctctcag gattctgcca aagcctataa acgagaagct
     1081 cgtaagcctt atcgtccttg gcatcaacat aatcaaaaag gaaaataaga tgactatttt
     1141 attaagctgc ctttttttag gggtgtttgt cggcttttta gccggcttgt tcggcattgg
     1201 tggtgggtta atcatcgtgc cgagtttggt cttcctactg cccatggcag gtgtaccgcc
     1261 ggaatatata atgtccaccg cactcggcac atcattttca accattatta ttaccgcctt
     1321 tgcatcggca caacgccatc ataagttagg caatgtcgat atccaaacca gtaaatattt
     1381 tattccagcg ttgatggttt cggtttttct atcgggcttg gtggtaagcc gcctcgatcc
     1441 gcaactgatg tctagaattt ttgcggtaat ggtactttac cttgcaggta aaatgatttt
     1501 ttcaataaaa agagcaccga aaaataaacc acttaccgtt caaacgacga taatcggagg
     1561 ttcaatcatc ggtgcgttag ccagtatggc agggatcgca ggtggagcct ttattgtacc
     1621 atttttaaac gatcgaggct tagaaatgaa acgtgccatc ggcacttcct cattttgcgg
     1681 agcattttta ggtttatctg gcacaatcag ctttattgta agtggctggg gcttagaagg
     1741 aatgcctgat tattctctcg gttatgttta tttaccggct ctgtttggta ttacggcaac
     1801 ttcatttttc acctcaaaaa tgggggcaag tgccgccaac gctctacctg tgccgatgct
     1861 gaaaaaagcc tttgcggtgc ttttggtctg tatcgccatc aatatgtttt taaaataagg
     1921 acactatgaa cgaacaattt atccaatttc cacaaattag cccgattgtg tttgaaatcg
     1981 gtccgattgc cctgcgttgg tatgggctaa tgtatttagc cggctttgcc tttgcctact
     2041 ggctgggaat gagacgggcg aaaaattcca atggagtttg gacaaccgag caagtggata
     2101 gcttagtcta tacttgcttc tggggcgtag tattaggtgg gcgtatcggc gatgtgttct
     2161 tttatagctt cgaccgtttc ttacaagatc cgctctacct ctttcgcatt tgggaaggcg
     2221 gaatgtcctt tcacggcggt ttaatcggcg tcattgtagc aatgatttgg gtttcctacc
     2281 gccaaaaacg caatttctgg cagacagcag attttatcgc accgctagta ccgttcgggc
     2341 taggtatggg gcgtatcggc aatttcatta acgatgaact ttgggggcgt gtaaccgatg
     2401 tgccttgggc ggtgttattt ccaagcggtg gctatcttcc ccgccacccg tcacagcttt
     2461 atgaagcctt tttagagggt gtggtgttac tctttatcct caactggttt attcaaaagc
     2521 ctcgcccggc aggtgcggtt tcagggttat ttttaatcgg ctacggcaca ttccgcttta
     2581 ttgtggaata cttccgagaa atcgaccata acgtcaatac caccgcagat ttaatcactc
     2641 gtgggcaact actctcttta ccgatgatta tcggcggcat actgattatg gcgtgggcgt
     2701 ataaagtaaa caaagtgaaa taaacgtagg ggcaagtcaa tatttgccct cattacaaaa
     2761 attgcaaaaa atttgcagaa aacgaccgct tgtgtttgaa ggatatacta tgagtaaaaa
     2821 atacaaagtc atcggtttcg acttagacgg aacgctaatc aacaccctcc ccgatctcac
     2881 tcttgtcgcc aattcaatgt ttctagaagc cggtttgcca acggttacac aagaaaaagt
     2941 gctgacttgg atcggtaaag gggcagatat tttcttccaa aatgcggttg ctcacaccgg
     3001 cagaattttc caagccgatg agttggtgaa aatgcgagtg agctttgata aatactacgc
     3061 cacctatgtg tgcgaggaaa gcaccctttt cccaaatgtg aaagaaacct tagaaatcct
     3121 caaagcaaac gactacccgc tggtggtgat taccaacaaa ccgaccaaat tagtcgagcc
     3181 ggtgctttcc gctttcggca tttatcattt attcgatgaa acccttggtg ggcaatcgct
     3241 ccccaaaatc aaaccgcacc ctgacccgat gttttttatc tgcgaaaaat tcggcattac
     3301 cccatcagaa ttactttttg tcggcgactc agaaaatgac gtgattgccg ccaaagccgc
     3361 cggttgtgat gtggttggac taacttacgg ctataactac aatgtgccga ttgaacaatc
     3421 taacccgact tttgtgacat ctgaatttaa agatgtgttg aaaattgtgg ggttataaag
     3481 aaaacatttg ttttcttttg atgtttgctt tagactttcc gaacctaaag atttaaagga
     3541 gtaaagtatg ccaacaatcg cattacgtca ggtcggtggc tcggttgcaa tggtgattcc
     3601 gcctgctttt ttagaggcac tcaagctctc cgtcggtagc aaagtggatt tgtctttaaa
     3661 cgacaaccaa ctcgtgatta atcctgcccg cccaaaagtg aaatacagct tagaggaatt
     3721 attaagacaa tccgattttg aggcagcaag gaatgaagaa agccaatcgt ggttatccga
     3781 gccggcaata ggaaaagaaa ttttatgaaa cgtggcgata tttactggct cgatcttgat
     3841 ccaaccttag gacacgaaca atcaggcttc cgccccgttg taattgtttc cgcaactgca
     3901 tttaatctag ccagtaaact gcctgtggtt gtgccgatta ctaacggtgg agcttttgct
     3961 gaaagactgg gctttgccgt ttcattaaaa gatgccggct taaaaacaac agggattatt
     4021 cgatgcgatc aacctcgcac agtcgatatt gcacaacgcc atggaaaatt tatcgaagcc
     4081 ttacccgaaa gcctacttga tgaaattatg gcaagggttt cagtgatttt tgagtaagat
     4141 acaagcggtc tgatttgctc tattttttgc aaaatcatca ataaatctga ccgcttgtac
     4201 ttttatccct tcccaataac cgttaagata acctatattt ttcaaatcaa acgagaagat
     4261 aaaatgagca aacctattgt atttagtggc gtgcagccct caggtgaatt gactatcggt
     4321 aactacttag gggcgttacg caactgggtg aaaatgcaag atgattatga ctgtgtatat
     4381 tgcattgtcg atcaacacgc cattaccgtt cgtcaagatc cggagtcgct acgcaaatca
     4441 actttagatg tgttagccct gtatttagct tgtggcattg atccaaacaa aagcactatt
     4501 tttattcaat cccacgtgcc ggaacacgcc caattagctt gggtgctgaa ctgttacacc
     4561 tatttcggtg aaatggggcg tatgacgcaa tttaaagata aatcagcacg ctatgaagag
     4621 aatgtcaatg tgggcttatt tacttatccg gtattaatgg cggcagatat tctgctttac
     4681 caagccaacc aagtgccggt aggcgatgac caaaaacaac atttggaaat cacccgtgac
     4741 attgccaacc gtttcaatgc cttatacggc aaaaaagatt ccgaaggcaa cctgatcgag
     4801 cctgtttttg cagtgccgga agtctttatt gcgaaatccg gggcaagagt gatgtcgcta
     4861 cttgagccga ccaaaaaaat gtcaaaatcg gacgataatc gtaacaatgt gattggacta
     4921 ttggaagatc cgaaagcggt agcgaagaaa atcaaacggg caatgaccga tggcgatgaa
     4981 ccgccagtag tgcgttatga cgtacagaat aaagccggtg tctcgaattt attggatatt
     5041 ctctccgcca ttaccggcaa aaccattgcc gaattagaaa ccgaatttga aggcaaaatg
     5101 tatggtcatt tgaaaacaga agtagcagat aaggtttccg aactattaac caatctgcaa
     5161 gaacgttatc accactaccg ccaagatgaa gcattattgg aaaaaatcta ccgtgaaggg
     5221 gcagaaaaag ctcgagctca agccaaagca acgttagata aggtatatga attagtcggt
     5281 tttgtgcgtt actaacactt aatgaaaaat gctcttgagg attcaagagc atttttgcaa
     5341 aaaagaaccg attgtcaatt atttacgggc gttataaatc ttcattgctt ccggcacaag
     5401 gcgggctaag ttttcttgac ggtcagcatt tgatgggtga gttgagaaaa tggacaagcc
     5461 tgaatcgcca ttggctttac tcatttttac ccaaacattc ggcgctgctg atgggttgta
     5521 gcctgattct gccattaaaa ttaacccaac ttcgtccgcc tcagtctctt ggctgcgaga
     5581 gaatggcttg gtggcaatca aatccacgcc agtgctgagt aaaccttcgg tgcttacgcc
     5641 tgttgaggca gtcacagcca catctgcaat agcacctaca atactggtaa tagcgctaac
     5701 cgtacggtct gatttaccgt gttctttcag tgcgtgagcc atctcgtgtc ccattaccac
     5761 tgcaatttca tcgttcgata aattaagtct ttccactaac cccgtgtaaa acgccatttt
     5821 accgcccggc atcgcccacg cattgagttc atccgatttc aatacggtaa tttcccaatg
     5881 aaaaggtaca ccagtctggt tggctctttc cgcataaggc ttcattttat gaaaaacagt
     5941 gtgaatccgc ttagcggtgg cagacgaatt gtcaatcgca ttttgctgac gagcttgggt
     6001 tttcacttga gcataacttt gagccgcttc ttggttaatg ctttctgttg tggcacaagc
     6061 ggtaatcact gttgctaaaa aaactgaata acttaatttt ttgatgaatt tcattttata
     6121 tcccacaaaa aatgccaaac aaatttgctt ggcattcaaa aataaataat tatttcttag
     6181 cacgctcgaa tgattctaag atttcttggc gagcttcgtt tacatcgccc caaccttcta
     6241 ctttcaccca tttgcccgct tctaatgctt tatagctttc gaagaagtgc tggatttgtg
     6301 cttttaataa cgccggtaag tcacctacat ctttgatgtg gtcatactct ttacttaatt
     6361 tggtgtgtgg aacagcaacc acttttgcat caccgccggc ttcatcggtc atttttaaca
     6421 caccgacagg acggcaacga atcaccgaac ccggttgtaa cggatatggt gttggcacta
     6481 atacatcaac cgggtcaccg tctgatgata aggtgttatt cacataacca tagtttgccg
     6541 gatagaacat tgcggttgcc ataaagcgat ccacaaataa tgccccggtt tctttgtcca
     6601 cttcatattt gattggatca gagtttgccg gaatttcaat tacaacataa atatcgtccg
     6661 gtaattcttt accggcagga actaattcta agcccatttt ggtttccttc tataataggt
     6721 gaaataaacg gcgtgattat agcctatttt cagaaaaaga taaaagcccg tttctctttt
     6781 cattttccgc caacaaatcc ggctaatttt ttgctaaatt gcttacaaac cgcacactca
     6841 accatttttc gataaaaaaa acttgccaaa gttttaaaaa tccgtaagat atgccctcgt
     6901 tacgcaagat tatgggtcat tagctcagcc ggtagagcag cggactttta atccgttggt
     6961 cgaaggttcg aatccttcat gacccaccat taatcttcaa aacacctcta agggtcatta
     7021 gctcagtcgg tagagcagcg gacttttaat ccgttggtcg aaggttcgaa tccttcatga
     7081 cccaccatta atttcaaaac tcctctgagg gtcattagct cagtcggtag agcagcggac
     7141 ttttaatccg ttggtcgaag gttcgaatcc ttcatgaccc accatttact caaatcccat
     7201 ttgcaaattt ttctgaaaaa acaaccgctt tatagtagaa ttcagtcaat ttttatcact
     7261 tttattttat tcatcaatgc taaaaaaaat ccttattgca ttaggcttag ccggcgttat
     7321 tgcttgcggt ggactgtttt acggctacca aaaactcacc tctttagccg aacacccgat
     7381 cacggttcag ccgaatcaac ttttcgtatt ggaaaaaggc gtttccagcc aaaaattagc
     7441 ggctctgtta gaagagcaag gcattgtcac ccacgatgac gccgatctta tcccttattt
     7501 aatgcgatta taccctgagt taagcaaatt caaggctggt gcttattcac tcgcaggctt
     7561 aacgacagta aaagatttgc tcgctcattt aagctccggc aaagaagtgc aacttaacgt
     7621 gcaatttatt gagggcaaaa cttttaaaat ttggcgggaa caactagcga aagccgatta
     7681 tttacagcac acgctacaag gcaaatcgga aaaagaaatc gctgacttac tcggcattcc
     7741 acacgaaaaa atcgaaggtt ggatagcccc ggatacttac aactacacgc ccaattccac
     7801 cgatttagcc ttgcttaaac gggcttatca aaagcagaaa acggcgttgg aacaggcttg
     7861 gaaaaataga gcggaaaatc taccgcttgc aacaccatac gaaatgctga ttcttgcctc
     7921 gattgtggaa aaagagaccg gcattgcgac cgaacgccca caagtggcat cggtctttat
     7981 taaccgttta cgcaacaata tgcgactgca aaccgatcca accgtcattt acggaatggg
     8041 cgatcgttat aacggcaata tccgccgcaa agatttagaa gaggcaacgc catacaatac
     8101 ttaccagatt gacggcttac cgccaacgcc gattgccatg ccgagtgaag cttcgattaa
     8161 agcggttgcc aacccggata atacacccta cctctatttt gtggcagacg gcacgggcgg
     8221 tcataaattc agcaaaacac tgaatgagca taataaagcg gtggcagaat ggattcaaat
     8281 tgaacgcaaa cgcaaaaatg aacaaaaata gtgagaacaa tatgcgtgga aaatttattg
     8341 taattgaagg cttagagggc gcaggcaaaa cgactgctca ccaagtgatt ctcaaagagt
     8401 tggaacaagc cggcattaat gacgtagtaa tgacccgaga acccggcggc accccccttg
     8461 ccgaaaagtt acgccattta attaaacacg aaaccgaaga agccattaac gataaggctg
     8521 agctgctaat gctctacgct gctcgtgttc aattagtcga aaatgtgatc aaacctgccc
     8581 ttgccgaagg caaatgggtt ctgggcgacc gccacgatat gtcttcccaa gcctatcaag
     8641 gcggtggacg taagttggat cgtcacttac tcgaaacctt aaaagaatcg gtactcggca
     8701 cattcgagcc agatttaacg atttatctcg atctcgatcc ggtgattggt ttagaaagag
     8761 ccagaggcag aggcgaatta gaccgcatcg aacagcaaag ccttgacttc ttctaccgca
     8821 cacgagagcg ttatttagaa ttaacccaac acaacgataa agccgtgatc atcaatgccg
     8881 aacaacccat cgaacaggtg actgcggata ttcaacaagt aattagaaac tggctgaaat
     8941 aatgtaccct tggctcgaaa gcacttatca acaacttacc gattcatttt tacagggtcg
     9001 aggtcatcac gccttactgt tcaaaacaga tgttggtctt ggtacagaca ccttaatcta
     9061 caaggtggct gaatggttgc tttgcagcca aaaactccgc catcaacctt gtcttgaatg
     9121 caaaagttgc ctgcttatgc aaagcaacaa ccaccccgat ttccacattc ttgagccgat
     9181 tgaagacaaa gatattggta tcgaccaagt gcgtgagttg atttataaac tccagaattt
     9241 cgcccaacaa gggggaaata cggtcgttta tattcgagga gttgatcgtt taaccgaggc
     9301 aagcagtaat gccctgctca aaaccttgga agagccacgt gaaaacgtct atttcttgct
     9361 cgaagcaccg cttcaagcaa cagttttagc taccattcaa agccgcagcc aaacttgggt
     9421 actttacgcc ccacaagcct cagaagtaat ggcttggcta caaacacaat ttccggcaat
     9481 ctcaaccgac gacttagaga ttgcactccg cctttgccac tcacgcccac taatttgcaa
     9541 aaattttatc gaaaatgacc gcttgcaaca gcgaaaaacc tttttgcaaa ccttctggcg
     9601 tttctacaaa agccacgatg tcttcttgtt attccaagcc ttcgcccaag aaaaagagct
     9661 gattttacag caactcgaat ggctggaaag tttctttagc gatgccctaa aagctaaaat
     9721 ggcaatcagc cacggttggc taaacccgga tctccaaaac ggcattctcc cttttagcca
     9781 acaactaacg acccacggct tacttaaagg gcatcaaatt ctccaacaaa cccagcggga
     9841 tttaaccgaa attaacgccg tcaatccgga attgatgttg ctagattgcc tgacgaagtt
     9901 ggttttggtg tttgagtaaa agccctctct catagaaggt agctttcaat tagccgtaaa
     9961 aagaggcttc tagccctaga atatagttta taacttgcaa aattatctat ctttgttatt
    10021 gtatgaataa ttcacacaag gagaatatta tggcaagaac aaccagcgtg actttaggcg
    10081 aacctttaaa tgattttgta aatgaaatgg tggcaagtgg gcgttatggc tctaccagtg
    10141 aagtagtgag aaccgcttta cgaatgcttg aggaaaaaga gcaatactta gctcagttgc
    10201 gacaagccat tgatgatggt gatgctagtg gttatgcaac cgaaacgatt gatgaaatga
    10261 tgttgagagt aaaggcggaa cttaatgtat aaactttctg ctcaagcact ccgagatcaa
    10321 gagaaacttt ttcgttacag tatctctcaa tttggtgttc aacaaacaga atcttatttt
    10381 gcagatctaa agcatatttt gaatttatta gctgattttc caacaatggg aacttctgcg
    10441 gaatatattc gtggtggctt gcgaatgcac acacatcaat ctcatacaat ttattatcga
    10501 ataaaagcag atcatatatt tattgttcgc atcttacata accaaatgaa tcataaacgc
    10561 tatatttaga aaaatgaaag acttatttat catagactca cattgtcatc tagattctct
    10621 agactacgaa actcgtcaca aaaacgtgga cgaagtaatt gaaaatgcca aagcccgagg
    10681 ggtgcatcat tttatctcgg tttgcactac agttgggcgt tttgaagcaa tgaaaaactt
    10741 aaccgcccat cgtaatgacg tttcactttc ttgtggcgtt cacccgttga atgtggaaga
    10801 tgaacctttt gattacgata aattatttca gttcgctcaa gatccgaaag tggttgccat
    10861 tggggaaact ggtttggatt atcactacac accggaaacc aaagcgttgc aacaatcgct
    10921 tttcgttcaa caaattgaaa ttgcaaacaa actcaataag ccactcatta tccattctcg
    10981 ttcggcacgc caagatacga tggatatgtt ggaacaaaat aatgccgaaa aatgcggtgg
    11041 ggtgttgcat tgctttaccg aagattgggc aatggcaaaa cgggctttag acatcggctt
    11101 ttatatctca atttcgggca ttattacttt ccgcaatgca gaagaactcc gagaagtcgt
    11161 gcgaaaagtg ccgttagatc gcttattggt tgaaacagat tccccttatc ttgccccgat
    11221 tccttatcgt ggtaagccga accagccggc gtatgtgcgg gaaacttgcg aatatgtggc
    11281 gacattaaaa ggcgtttcaa ctgaagaatt agctcgcatt acaaccgaaa atgtgcaaca
    11341 cttattcaac attaaattat aaggaactaa tatgagagca atacttaagt attttctgat
    11401 tcttgtctca ctatcatttt ttattgtatt aggcggtgca gttaattatg caatgccaag
    11461 ttatgaagat accgtagtaa caggtatgga agtacgccga atggataaag atggtattat
    11521 cagcaaagcg aatcctgctg atggcgaggt gcgcgatgtt tatttcttat tcacggaaga
    11581 tcctgaaacc aaaaaggtaa tggtttatcg taatgaagat accggctggg ggttgcctcc
    11641 ttatttcaaa ttcggatctg ccgacattca agccaaagct caagcctacg ctaacgaaaa
    11701 acaacgtgtg caaattaaat attacggctg gcgaatcaat tggctaaatg aatttagaaa
    11761 tattgtttca atcaagccat tagaagaagc agaaacagtc agcaaaccaa ttatgagcta
    11821 tgtactttat gccgtattgg cgttcttgtt cttcctctca gtacaattta ttcgtggcat
    11881 ttttaaagat taatgccgat taacctttga caaacggttc gattttgtaa aaaattgaac
    11941 cgttttcttt tttatcaaca atatcaaatg acgtactatt ttattgccga tctccactta
    12001 aatgaaaatc agcctgaaat tacccacctc tttttgcaat ttatgcaaga aaaagcacta
    12061 cttgcagaag cggtttatat cttaggtgat ctgtttgatt tctggattgg cgatgatgag
    12121 cagtctgaac tcatttcaac cgttaaacag gcaatcaaaa ccctcactac aagcggtaca
    12181 aaatgctatt ttatttgcgg aaatcgtgat tttttaattg gcaaacgatt cagcgaacaa
    12241 acgggtatgg ttattttgcc tgattatcac gttatagatt tattcggcac atctaccttg
    12301 ctttgccacg gcgatacgct ttgtactgat gatgtgaaat atcaacaatt tcgtaaaaaa
    12361 gtccaccaaa aatggcgaca agctatcttt ttgatgtttc cgctttcttg gcgaattcgt
    12421 attgcggaga aaattcgatc caaaagcaaa caagaaaagc gtgataaatc cgctgaaatt
    12481 atggacgtaa acgctgaagt taccgctcaa attgtcgcaa aatacaatac aactcaactt
    12541 atacacgggc atacgcatcg acaagcaatc catcagcata atggatttac ccgcattgta
    12601 ttaggcgact ggaaagaaaa ttacgcctct attttaagcg taaccgagca aggagctgaa
    12661 tttatatgat taatgtgatt attccttgct ataacgccga aaacaccctt gttcgtgcag
    12721 tgcaaagtgt attaaatcag tctggattaa atctattgtg gcttattgat gatgcttcaa
    12781 cggataatac gcttgcctta gctaaacatt tacaagccca agtgcctgat aaaattagag
    12841 tggaacaaat gcctcaaaat ggcggtgttg ccaaagcacg caactgggga gcattacaaa
    12901 gtgaaacaga tttaattgcc tttttagatg ctgatgatgc ttatgaaaac ggggcattgc
    12961 aagttgctga aaagattttt gagtttaaac cggaaaccgg cttggttcgg ttagcattaa
    13021 aaccggtaac ttagatcaac gttacagctc tcaccctaat tttgagttag cttggcaata
    13081 tatgcaaatg actggtgcag gcaacactgt atttcggcgt agtttcttcc tcgcttgtgg
    13141 cggctttcca caacatcagc tcttccaaga attaggtgga gaagatggtg ctttaggcat
    13201 agccactaca caaattagct ctgtagctac tgcatttaat gatgtcggtg ttttacatta
    13261 ctgccgagag ggtatgcacg cagaaagatt attaaatgcg attttattca acgaaaaaga
    13321 tcccaatgtt actgaagaaa aagttaaaca agccaaccta attaccgaaa atattgttaa
    13381 taatattaga aatctacaag actgtcttaa tagtaaaggg attggtatta agccttatac
    13441 gcttgaatgg agctaaaaaa gcatttgcag attttcccta aaaaaa
//
LOCUS       DANMCL010000081        13178 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.081, whole genome shotgun sequence.
ACCESSION   DANMCL010000081 DANMCL010000000
VERSION     DANMCL010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13178
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.081"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            174..1472
                     /gene="tig"
                     /locus_tag="PXF40_002077"
     CDS             174..1472
                     /gene="tig"
                     /locus_tag="PXF40_002077"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HDL5803380.1"
                     /translation="MSFSIETLEGLKRRVTINVPADKIEAAYKEQLKGYAKNARVDGF
                     RKGKVPHSIIEQRFGIAARQDVLSDEMQRAFFEAVIAEKINLAGRPTFTPNNYQPGQD
                     FSFTAEFEVFPEVELKGLENIEVEKPVVEIADADLDKMVDVLRKQQATWSESQEAAKA
                     ESRVTIDFVGSVDGEEFEGGKASDFVLFMGQGRMIPGFEDGIVGRKAGEQFDIDVTFP
                     EEYHAENLKGKAAKFAITLKKVEEMVLPELTEEFVKKFGNAKSVEELRAEIKKNMQRE
                     LKNAVTSRVKTQVINGLIAQNDVEVPAAAVEEEINVLRQQAVQRFGGKPEMAAQLPAE
                     LFEAEAKRRVQVGLLLSSIIGSNELKVDEKRVEEMIADIASAYEQPAEVVAHYAKNRQ
                     LTENIRNVVLEEQAVDAVLAKAKVTEKTMSFDEVMSQQAQ"
     gene            1588..2040
                     /locus_tag="PXF40_002078"
     CDS             1588..2040
                     /locus_tag="PXF40_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HDL5803381.1"
                     /translation="MEQLTFAQQLEQFFANHTLMVFAWVALLIAVIFSFYKSATQKYK
                     IVDNAQATQLINKEEAVVVDLRSDEEFRAGHIIDSIHVLPSDIKAAKINQIDKYKARP
                     VIVVDTNDFTSGGVAADLAKQGFSRVYVLKEGIGGWRAASLPTIKKHK"
     gene            2061..2561
                     /gene="secB"
                     /locus_tag="PXF40_002079"
     CDS             2061..2561
                     /gene="secB"
                     /locus_tag="PXF40_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HDL5803382.1"
                     /translation="MSEENQVASTEEATQTPFELQIQRIYVKDVSFEAPNLPTIFQQE
                     WKPQLGFELDTETKEIGEDLYEVTLHITVQTTLEDSNDVAFICEVKQAGVFTIKGLEG
                     IQLAHCLASQCPNVLYPYARELISSLVNRGTFPALNLSPVNFDALFMDYLQRQEESAE
                     EPALAN"
     gene            2668..3678
                     /gene="gpsA"
                     /locus_tag="PXF40_002080"
     CDS             2668..3678
                     /gene="gpsA"
                     /locus_tag="PXF40_002080"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HDL5803383.1"
                     /translation="MSEIYSAPITVLGAGSYGTALAIALSRNGHKTYLWGHNPDKMAV
                     LASERMNQDFLPDIVFPEALEIVADLATAVQKSKDLLIVVPSHVFSEVLAQIKPFLSQ
                     DHRIMWATKGLERDTGRLLQTVAKEILGEIYPLAVLSGPTFAKELAAGLPTAISLAST
                     DPVFADQMQKRSHCSKAFRVYLNNDIIGVQLGGAIKNVIAIGAGISDGMGFGANARTA
                     LITRGLAEISRLGVSLGADPKTFTGMAGLGDLVLTCTDNQSRNRRFGLALGQGKSAEV
                     AIAEIGQVVEGFYNTKEAYLLAQTQGVEMPIVEQIYQMLFCGKQASDVVKTLLGRERK
                     GE"
     gene            3694..4509
                     /gene="cysE"
                     /locus_tag="PXF40_002081"
     CDS             3694..4509
                     /gene="cysE"
                     /locus_tag="PXF40_002081"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HDL5803384.1"
                     /translation="MQQSEINQIWQAIRDEAKELANCEPMLASFFHATILKHHNLGDA
                     LSYILANKLENPIMPAIALKEIIEEAYRAEPQIIASAACDINAVRTRDPAVDKWSTPL
                     LYLKGFHALQSYRVTHYLWNQGRKALAVYLQNEISVAFDVDIHPAAKVGCGIMFDHAT
                     GIVVGETSVIENDVSILQGVTLGGTGKENGDRHPKIREGVMIGAGAKILGNIEIGRYS
                     KIGANSVVLQPVPDHATAAGVPARIIGKSSEQKPAFDMNQYFEDEQGLFGDGI"
     gene            4558..5169
                     /locus_tag="PXF40_002082"
     CDS             4558..5169
                     /locus_tag="PXF40_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HDL5803385.1"
                     /translation="MQLTFNDFQNYYNGKGDLTMFSFYGKKTWENGIYVGIDGSIGRA
                     NNKLSHQSQTIKLARNVYSLGLTVGKTLEVASFNLQPSFGMRYHHLTSANAQLENTKF
                     ETDRVDLLAIQAGLALNKTFIFNELKVKPELGSYFVDASHGTLKTKLNEFSLNQNIGR
                     YFKQEVGITLHYKGVSSSVHAGFTKGNTLQEQKFISLKVGYEW"
     gene            complement(5709..6401)
                     /locus_tag="PXF40_002083"
     CDS             complement(5709..6401)
                     /locus_tag="PXF40_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5803386.1"
                     /translation="MTELTPKQEAFCFAYIETGNASEAYRQAYETEDMKSETVHRKAK
                     ELMDNGKITARIEELKAEHAERHKLTVDDLLKELEEARILAREKENPNAMTQATMGKA
                     KLLGLDKQVTDPCFDGETGKGDMILSVNCSSIKDGKALDETCILKAGTHEFITRDSFI
                     FYRHIRIDSLDEIKANIEAGYFIQKALINDEAYQQILKGVLSSKSVTPRYKRFLKNAI
                     RQSACPDILAEP"
     gene            complement(6398..6823)
                     /locus_tag="PXF40_002084"
     CDS             complement(6398..6823)
                     /locus_tag="PXF40_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803387.1"
                     /translation="MKHELNLAGITALMNEPIKATLSFLDFPHIRIERLHHDNGRPFF
                     IGVLSLDLEDHINIEMAGATGFLEALAIIAYHQQLTATPLLVNDDLLSEINKLPHPQR
                     TNPFIDRHGNEITREQMSKEYREKIDYAFAEKRMAEGKE"
     gene            complement(6830..6982)
                     /locus_tag="PXF40_002085"
     CDS             complement(6830..6982)
                     /locus_tag="PXF40_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803388.1"
                     /translation="MPELLIVLGNRIAKLEQQHNAMPSETDSITLGILRKQLSQLLKV
                     AERIKE"
     gene            complement(7143..7829)
                     /locus_tag="PXF40_002086"
     CDS             complement(7143..7829)
                     /locus_tag="PXF40_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803389.1"
                     /translation="MADHSQFISRLENRIEPKISFQELIQELSNYTNKPFSHIADKLK
                     SLIFSFQQNGIYTNAFVNCTLFEDGESYAIEPKTLHFKDAFDQPKGVLSDVIAQNSID
                     VEHLNAYYVTAREITQLIKTQSPTLLDKLTTKQTQSEISQIQNDYISVYDFIEWASKH
                     YSSLSETANDLNRLLKDKNIQLYRQYGGISPSIDKDNTNLKAAFDFVAINNGYEKQSS
                     SFNFDDDIPF"
     gene            complement(8224..8547)
                     /locus_tag="PXF40_002087"
     CDS             complement(8224..8547)
                     /locus_tag="PXF40_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5803390.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNDVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            complement(8660..8878)
                     /locus_tag="PXF40_002088"
     CDS             complement(8660..8878)
                     /locus_tag="PXF40_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module killer protein"
                     /protein_id="HDL5803391.1"
                     /translation="MMREQTTNQIIITDNFSKWLENLKNPIAKATVARRIKNAINGNF
                     GDHKSLAGTGGLYEMRIATGAGYRIYYA"
     gene            complement(9153..10379)
                     /locus_tag="PXF40_002089"
     CDS             complement(9153..10379)
                     /locus_tag="PXF40_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5803392.1"
                     /translation="MARKITPLNDTQIRKAKPEDSPLRDGNGLLLVITSNSKLWRFRY
                     ERPFTKKRNDLSIGAYPDISLAQAREIREEYRALLAQNIDPQTHRQQQEQAKANEISN
                     TYENVAWAWLEHRKTKKNFSDNYQKDVIALIKNNLLPHFGRMPITQITAPMAIKAFKQ
                     YQDEGKLEKLKRAIQKHNEIMMFAVHREMIPFNPTANIAKEFDSPTVEHFKTIKPEDL
                     GEFLYTLQNAQIHLQTRYLILWQLLTMTRPNEAAKAKWADIDEKAKLWTIPAENMKRG
                     IEHKITLSRQAIALLREIKKLSGGKTYLFPSVKNPQTHVNTQTANGAIKRMGYKGKLV
                     AHGLRAIASTYLNEKGYNSDLIEVALSHLNSDRIKAAYDRGERLEQRFKLLQVWADFV
                     EECSQGSLPQYHLKIA"
     gene            complement(10654..11020)
                     /gene="ssrA"
                     /locus_tag="PXF40_002090"
     tmRNA           complement(10654..11020)
                     /gene="ssrA"
                     /locus_tag="PXF40_002090"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            11186..12145
                     /gene="rpoH"
                     /locus_tag="PXF40_002091"
     CDS             11186..12145
                     /gene="rpoH"
                     /locus_tag="PXF40_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HDL5803393.1"
                     /translation="MKKFNENEIEDAEIIDAEPIDVDEIDEEETSVEAMHPALVSGSM
                     PVPQGNLDSYIRMANQYPILTAEQEKELAERYYYDEDVEAAKQLILSHMRFVIHIARG
                     YLGYGLPLADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWVKAEIHEYVLKNWRIVK
                     VATTKAQRKLFFNLRKNKNRLAWFNEEEIKKVADDLGVSVEEVREMESRMTGQDLGFD
                     LPAGDDDEDSYAPSMYIEDSSSNFADDLEDEQHNGQATAQLAYALATLDERSQDIIKT
                     RWLDDNKATLQDLADKYNISAERVRQLENAALKKIKEAISLDG"
     gene            12311..12604
                     /locus_tag="PXF40_002092"
     CDS             12311..12604
                     /locus_tag="PXF40_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3144 domain-containing protein"
                     /protein_id="HDL5803394.1"
                     /translation="MTQLSTSVYQRADGFINVANAHLKNIAPNQVSNAMLFGCARFNA
                     YVAASKAEYKQQLADSREEVIQYFVEQYKEMLTANLDEYIQNFERYIEGKKAD"
     gene            complement(12622..12924)
                     /locus_tag="PXF40_002093"
     CDS             complement(12622..12924)
                     /locus_tag="PXF40_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HDL5803395.1"
                     /translation="MNTYNNTLNNKNLEKKQLLMAIQAIPASQDFIWDGKDDDERPVT
                     PSEFSIAMKKRGRPAGSKKELVSLRLDKSVLEAFRASGKGWQSRINQVLSDFVKQV"
     gene            complement(12896..>13178)
                     /locus_tag="PXF40_002094"
     CDS             complement(12896..>13178)
                     /locus_tag="PXF40_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HDL5803396.1"
                     /translation="YTWDETKRKINLAKHGLDFADADEVLSSPYRFDVEVIRNNEFRI
                     QSFAYSFGRLLVLSLAYTEREDYIRVISFRRASKAEREAYYEYLQQYFE"
BASE COUNT         3816 a         2457 c         2816 g         4089 t
ORIGIN      
        1 cggtgaaaaa agaccgcttg taggcaagcc cattgacaag cagtcagatt ttagggattt
       61 tttacaaaac tgtttatttg cgaatgagtt tcttctcgac agtttcttga tagaacgcta
      121 caataaccgt ctatttgtat atctttttta tatccctaaa ccgaggttta agaatgtcat
      181 tttcaattga aacattagaa ggcttaaaac gccgtgttac tattaacgta ccagctgata
      241 aaatcgaagc agcatacaaa gaacaattaa aaggctatgc gaaaaatgct cgtgtagatg
      301 gcttccgtaa aggtaaagtg ccacactcaa ttatcgaaca acgttttggt attgcagccc
      361 gtcaagatgt gttatctgat gaaatgcaac gtgcattctt tgaagccgtc attgctgaaa
      421 aaatcaactt ggcaggtcgc cctactttca cgccaaacaa ctaccaacca ggtcaagact
      481 tcagctttac tgcggaattt gaagtattcc cagaagtgga attaaaaggt ttagagaata
      541 tcgaagtaga aaaaccggtt gttgaaatcg cagacgctga tttagacaaa atggtagatg
      601 tattacgcaa acaacaagcg acttggtcag aaagccaaga ggctgcaaaa gccgaatctc
      661 gtgtaactat tgatttcgtt ggttcagtag atggtgaaga attcgaaggc ggtaaagcat
      721 cagacttcgt gttatttatg gggcaaggtc gtatgatccc ggggtttgaa gacggaatcg
      781 taggtcgtaa agcgggtgag caattcgaca ttgatgtgac tttcccagaa gaataccacg
      841 ctgaaaactt aaaaggcaaa gcagcgaaat ttgcaattac cttgaaaaaa gtagaagaga
      901 tggtattacc ggaattaacc gaagagtttg tgaaaaaatt cggtaatgca aaatcagtgg
      961 aagaattacg cgcagaaatt aagaaaaata tgcaacgtga acttaaaaat gcagtcactt
     1021 cacgtgtgaa aactcaagta atcaacggct taattgctca aaatgatgtt gaagtgccgg
     1081 ctgctgcggt tgaagaagaa atcaacgtat tacgccaaca agcggtgcaa cgttttggtg
     1141 gtaagcctga aatggcagct caattaccgg ctgaattatt tgaagcagaa gctaaacgcc
     1201 gtgttcaagt gggcttatta ttatcttcaa tcatcggttc taacgaatta aaagtagatg
     1261 aaaaacgtgt tgaagagatg atcgcagata tcgcttcagc ttacgaacaa ccggctgaag
     1321 tggttgctca ctatgcgaaa aaccgtcaat taactgaaaa tatccgcaat gtggtattag
     1381 aagagcaagc ggttgatgca gtgctagcga aagcgaaagt gactgaaaaa acaatgtcat
     1441 ttgacgaagt aatgtcacaa caagctcaat aatttcctta taaggtgggc ttttgctcac
     1501 cttttattac ttttacaagc ggttaaattt agtgataaat ttgcatcaaa acgaccgctt
     1561 attttttgat gttaaggaaa ttgaattatg gaacaactaa cttttgctca acaattagag
     1621 caattttttg ccaatcatac cttgatggtg tttgcttggg ttgcattatt gattgcggta
     1681 atttttagct tttataaaag tgcaacgcaa aaatataaaa ttgtcgataa cgcacaggct
     1741 acacagctga ttaataaaga agaggcagta gtggttgatt tacgttctga tgaagagttc
     1801 cgtgccggtc atattattga tagcattcac gtgttaccgt cagacattaa agcagctaaa
     1861 atcaatcaga ttgataaata caaagctcgc ccggtaattg tagtagacac taatgacttc
     1921 acttcaggtg gtgttgcggc agatcttgct aaacaaggct ttagcagagt ttatgtatta
     1981 aaagaaggga ttggcggctg gcgtgcagca agcctaccaa ctattaaaaa acataaataa
     2041 tctattatta aggaaatttt atgtcagaag aaaatcaagt tgcatcaaca gaagaagcta
     2101 cacaaacccc ttttgagctt caaattcaac gcatttatgt aaaagatgtt tcatttgaag
     2161 caccaaattt accgactatt ttccaacaag agtggaaacc acaattaggc tttgagttag
     2221 atactgaaac caaagaaatt ggtgaagatt tatacgaagt taccttacac attacggtgc
     2281 aaactacgtt agaagacagc aatgatgtcg ctttcatttg tgaagtaaaa caagcaggtg
     2341 tgtttactat taaaggttta gaaggcattc aacttgctca ctgcttagct tcacaatgtc
     2401 cgaatgtgct ttatccttat gctcgtgagc taatctcaag ccttgtgaat cgtggtacat
     2461 tcccggcatt aaatctctca ccggtaaact ttgatgcgtt atttatggat tatctccaac
     2521 gccaagaaga aagtgcagaa gagccggctt tagcgaacta agcattttag atagaaaata
     2581 ggtatgcaag gcatacctat ttttttacaa gcggttattt tttctactat tttttgcaat
     2641 tttctaaata agccgaacag aggaaatatg agtgaaatct attctgcccc aatcacggta
     2701 ttaggtgcag gttcttatgg aacagcttta gccattgccc tttctcgaaa tggtcacaaa
     2761 acctatttat gggggcataa tcccgacaaa atggccgttt tggcatcaga gcgaatgaac
     2821 caagattttc tgcctgatat tgtattcccg gaagccttag aaattgtcgc agatcttgct
     2881 acagcggtac aaaaatcgaa agatctgctg attgtggtgc caagtcatgt attctctgaa
     2941 gtattggctc aaatcaagcc ttttttgtcc caagatcacc gtataatgtg ggcaaccaaa
     3001 gggctggagc gagataccgg gcgtttgttg caaacggtag ctaaggaaat tttgggggaa
     3061 atttacccgc ttgcggtgct ttccggtccg acttttgcca aagaactggc ggcaggcttg
     3121 ccaacagcga tttcgcttgc ctcaactgat cctgtttttg ccgatcaaat gcaaaaacgg
     3181 agtcactgtt ccaaagcgtt ccgagtttac ctcaacaatg atattatcgg tgtgcaactc
     3241 ggtggggcta ttaaaaatgt gattgcaatt ggtgccggta tttcagacgg aatgggattc
     3301 ggggcgaatg ctcgtaccgc cttgattact cgagggctgg cggagattag ccgtttgggt
     3361 gtttcgctcg gggctgatcc gaaaaccttt accggaatgg cggggcttgg agatttagtg
     3421 ctgacgtgta ccgataacca atcccgaaac cgccgatttg gtttggcgtt agggcaagga
     3481 aaatcggcag aagtcgcgat agcggaaatc ggtcaagtgg tagaaggatt ttataatacc
     3541 aaagaagcct atttgctcgc tcaaacacag ggcgttgaaa tgccgattgt agaacaaatt
     3601 taccaaatgt tattttgtgg caaacaggct tcggatgtgg tgaaaacctt gttggggcgt
     3661 gaacgaaaag gcgaataaag aaaggagaat aaaatgcagc agagtgaaat taatcagatt
     3721 tggcaagcaa ttcgagatga agccaaagag ctggcgaatt gtgaacctat gttagcaagt
     3781 tttttccacg ctaccatttt aaaacaccat aatctaggcg atgcgttaag ttatattttg
     3841 gcgaataagt tagaaaaccc gattatgccg gcaatcgcct taaaagaaat tattgaggaa
     3901 gcttatcgag cagagccaca aattattgct agtgcagctt gtgatattaa tgcggtcaga
     3961 actagagatc ctgcggtgga caaatggagt acacctctgc tgtacttaaa aggcttccac
     4021 gctttacaaa gctatcgggt gacgcattat ctttggaatc aaggcaggaa agcattagcg
     4081 gtttatttac aaaatgaaat ttctgttgcc tttgatgtgg atattcatcc tgcggcaaag
     4141 gtcggttgcg gaattatgtt tgaccacgcc accggtattg tggtgggtga aacctctgtg
     4201 atcgaaaatg atgtctcgat tttacaaggt gtaacactag gcggtacagg gaaagaaaat
     4261 ggcgaccgcc acccgaaaat ccgtgaaggc gtgatgattg gagccggtgc aaaaattctc
     4321 ggtaatattg aaatcggacg ctattctaaa atcggggcaa attcagtggt gctacaacct
     4381 gtgcctgatc acgccacagc agcaggtgta ccggctcgca ttatcggcaa atcctctgaa
     4441 caaaaaccgg cttttgatat gaatcaatac tttgaagatg agcaaggttt gtttggtgat
     4501 gggatttagg taagagttat tcctttaatt tatgatttag acattgctaa gtacaagttg
     4561 caattaacct ttaatgattt tcagaactac tataatggta aaggggattt aactatgttt
     4621 tctttttatg gtaagaaaac atgggaaaat ggcatttatg tagggattga tggtagcatt
     4681 gggcgtgcga ataacaaatt aagccatcaa agccagacga taaaactagc cagaaatgta
     4741 tattctttag gattaacggt aggtaaaacg ttggaagttg caagttttaa cctacaaccg
     4801 tcatttggta tgcgctatca tcatttaaca tctgcaaatg cccaattaga gaacacaaaa
     4861 tttgagactg atagggtaga tcttttggcc attcaagctg gtttagcatt aaataaaact
     4921 tttatattta atgaattaaa ggtaaaacct gaattaggaa gctattttgt tgatgcaagc
     4981 cacggaacac ttaaaactaa gttaaatgaa ttttccttaa atcaaaatat aggccgttat
     5041 tttaagcaag aagtagggat tacactccac tataaagggg tatcaagttc ggtacatgct
     5101 ggctttacaa aaggaaatac attacaagaa caaaaattca tttcactcaa agttggatat
     5161 gagtggtaag ctttatgtaa cctgaagcta cacttgaatc ggttcaaaca taatgttact
     5221 aaaaaagcct tgaaacattg attttcaagg ctttttaggt atcggttgaa ccgtatagga
     5281 ttataatttg gtgctggggt catctgaatt gtatcacttc aagcattgat aaataagggt
     5341 tttggttaat tcaaatttta tttgtactcc taaatatact cctaaaattc aaagtgcctt
     5401 attgcttagg ctattttgtg tacaattatt cggatcgtgt atagggaaat ttagttcgta
     5461 gttttctata gtagtttaag tttataaaga aaaaatttaa aactttttga aattttaccc
     5521 actttaccca ctgatttgtt ggaagccttg atatataagg ctttatagcc agtgggaagc
     5581 aagtgggtta cagtgggtta agtgggtaac tttgattttt acccactgtt agccactttt
     5641 agaggggaaa tattagcggt tttggtagtg gttaaagggc aaaaaaggcc ttaattctca
     5701 tcaacggctt aaggttcggc tagaatatca gggcaagcac tttggcggat tgcatttttt
     5761 aggaagcgtt tatatctagg cgttactgat tttgacgata gtacgccttt tagtatttgt
     5821 tgataggctt catcattaat tagggctttt tgaatgaaat aaccggcttc tatatttgcc
     5881 ttaatctcat ctaacgaatc gattcttata tggcggtaga aaataaagct gtcccgtgtg
     5941 ataaattcgt gtgttcctgc ctttaaaata caagtttcat caagtgcttt cccgtcttta
     6001 atgcttgagc agtttacact taaaatcata tctcctttac cggtttcacc atcaaagcac
     6061 ggatcggtaa cctgcttatc cagccctagc aacttcgctt tgcccattgt ggcttgagtc
     6121 attgcgttag ggttttcttt ctctctcgcc agtatacgag cctcttccag ctcctttaaa
     6181 aggtcatcaa cggttaattt atggcgttct gcgtgttcgg ctttcagttc ctcaatcctt
     6241 gccgtaatct tgccgttatc cattagctct ttagcttttc ggtggacggt ttcggacttc
     6301 atatcttcgg tttcataggc ttggcggtag gcttcgctag cattgccggt ttcaatataa
     6361 gcaaagcaaa aagcctcttg ttttggtgtg agttcggtca ttctttcccc tccgccattc
     6421 gcttttcagc aaaggcataa tcgatttttt ctcggtattc tttgctcatc tgctcccgtg
     6481 taatttcgtt gccgtgtcgg tcaataaatg ggtttgttcg ttgtgggtgg gggagcttgt
     6541 tgatttcact caataagtca tcattcacta atagcggcgt ggcggttagc tgttgatgat
     6601 aggcaataat cgctagagcc tctaaaaagc ccgtagcccc tgccatttca atattgatat
     6661 gatcttcaag gtcaagagaa agcacaccga taaaaaacgg tctgccgtta tcgtggtgca
     6721 gtcgttcaat tcggatatgc ggaaaatcta aaaagctcaa ggttgctttg ataggttcat
     6781 tcattaaagc agtaataccc gctaaattaa gctcgtgttt cattttggtt tattccttta
     6841 ttctttccgc cacttttaac agttggctaa gttgttttct taaaatgccg agtgtgattg
     6901 aatcggtttc gcttggcatt gcgttatgtt gttgttccag cttcgctatt cggttgccta
     6961 gcacaattaa aagctcgggc aatgggtaag ctcggtttca gaatagaggc ttaaaaacgt
     7021 gaatagtctg ctaaataatc aggtgttatc tcagaaaaat cgagcttttt ccctagtgct
     7081 gcttctaatt cttgtttatt taaaagtaaa ttttggaaat catttaaatt cattgctgcc
     7141 acctagaacg gaatatcatc atcaaaatta aagctgcttg attgtttttc atatccgtta
     7201 ttaattgcta caaaatcaaa ggctgctttt aaattagtat tatctttatc aatgcttgga
     7261 cttattccgc catattgtcg ataaagctgt atatttttat ctttgagtaa gcggtttaaa
     7321 tcgttagctg tttcactaag acttgagtaa tgtttacttg cccattctat gaagtcataa
     7381 acagaaatat aatcattttg aatttggcta atctctgatt gtgtttgctt ggtggttaat
     7441 ttatctaaca aggttggcga ttgtgtttta atcagctgtg ttatttctct tgctgttacg
     7501 taataagcat ttaaatgttc aacatcaata gaattttgag caataacatc acttaaaacg
     7561 cctttaggct gatcgaaagc gtctttgaaa tgtagtgttt tgggctcaat agcatagctt
     7621 tcaccatctt caaagagagt gcaatttaca aaagcattcg tatatattcc attttgctga
     7681 aaggaaaaaa tgaggctttt caatttatcc gctatatgtg aaaaaggttt atttgtatag
     7741 tttgataatt cttgtatcag ttcttgaaag ctgattttgg gctcaatacg attttcaagc
     7801 ctagaaataa attgactgtg atctgccata agcgcccctt taacgtatcc ctttactgtg
     7861 agagcgtgga aagagaaata aagggctttc tcctttcgtg ccggttaatt actccgccac
     7921 tatccacgct aatttgaata aatccgtata gttacggatt gaacttgata ggttgtattt
     7981 tgctaattat tcagataaat tacaagtaat aagctgtgtt ttattacagt aaatcaaaat
     8041 aggctaaaga tgggtttccg gacgctataa aaaagagcat tcaagcggtc atatttcatt
     8101 aaggttttgc gaatagtgcg gaattttcgg agcagtacgc acgcaaggag caaataaaaa
     8161 gccgtcaata tccatcaacg gctatttaaa agtgaggttt tgacaggtag caagtgataa
     8221 gttttagcca tttttgactt gtggaataag cactaaattg aatgccccta gaattttttg
     8281 aatagtgtca aagcgtggtt tgctgccttt ggctagggtt ttatataggc tctctctgcc
     8341 tagccctgtt tgcttggcca gctccgccat tcctcttgct cttgctacat cgttcaaggc
     8401 ttctaaaaat tcgtcttggt cgccctcttt taacacttcc gctaaatagg cttgaatagt
     8461 tgcctcatcg gttaaaaact ccgccacgtc aaaagggcgt aaaccgtgct tttctgctgc
     8521 ctgttcattg atttgtattg tttccattgc tttctcctgt agtttttaat tcagcccata
     8581 atgctttcgc tttctctata tcggcttgct gtgttgattt atcgccgccg tgtaacaaga
     8641 tataaattac atttccttgt tatgcgtaat aaattctata tccggctcct gttgctatcc
     8701 gcatttcata aagtccgcct gtaccggcta aagatttatg atcgccaaag ttgccattaa
     8761 tcgcattttt tatccgtctt gctaccgttg cttttgcgat agggttcttt aaattctcaa
     8821 gccattttga aaaattatcg gtaataataa tttgattagt ggtttgctct ctcatcattg
     8881 ccggcttctt attctattta ttgcttattg tatccattaa gatacagtga gcaagggttt
     8941 ttgccattta cccactttta acccacttta cccactgtca ttttttcttt atttttcagt
     9001 tagttataaa aaaataatag tgaaaagtgg gtaaagtggg taaaaatcga aaagtttaca
     9061 gaattttcat caaggggaat tacgggcata aaaaagccgt caggcggttt acctaacggc
     9121 attacaagcg gtcatttttg gcggaaaatt tactaggcta ttttcaaatg atattgcggt
     9181 aagctacctt gcgaacattc ctctacaaaa tccgcccaca cttggagcag tttaaaacgt
     9241 tgctctaggc gttcgcctct atcataggcg gctttgattc ggtcgctgtt taaatgcgat
     9301 aaggcaacct cgattaaatc gctattgtag cctttctcat taagataagt ggaggcgatg
     9361 gcccgcaagc cgtgagccac taatttgccc ttgtagccca ttcgtttgat cgcaccgttg
     9421 gcggtttgag tattgacgtg cgtttgtggg ttcttcacgc tagggaataa atacgtttta
     9481 ccgccactta gctttttaat ctctcgcaaa agtgcgattg cttggcgtga gagtgtgatt
     9541 ttatgctcaa tgcctcgctt catattttcc gccggtatcg tccacagttt ggctttttcg
     9601 tctatatccg cccattttgc cttagccgct tcattcgggc gggtcattgt gagtaactgc
     9661 cacagaatta aatagcgtgt ctgtaaatga atttgggcgt tttgtaaggt gtataaaaac
     9721 tcgcctaaat cttccggctt aatggttttg aaatgttcaa ccgttgggct atcaaactct
     9781 ttcgcaatat tggcggtagg gttaaacggt atcatttcac ggtgtacggc aaacatcata
     9841 atttcattat gtttttgaat tgcccgtttt aacttctcta gtttgccctc gtcttggtat
     9901 tgcttgaatg ccttgattgc cattggtgcg gttatttgtg tgataggcat tcttccaaag
     9961 tgcggcaaga ggttattttt aattaaggcg attacatctt tttggtagtt gtctgaaaaa
    10021 ttcttcttgg tcttgcggtg ttccagccac gcccacgcta cattttcata agtgttgctg
    10081 atttcgttgg cctttgcctg ttcctgttgt tggcggtggg tttgagggtc gatattttga
    10141 gccaataatg ccctatattc ttctctaatt tctctcgctt gtgctaaaga aatatcaggg
    10201 taagccccaa tgcttaaatc attccgcttt tttgtgaacg gtctttcata cctaaaccgc
    10261 cacaatttag aatttgaggt aataacaagt agtaagccgt taccgtctct taatgggctg
    10321 tcttccggtt tcgcttttct tatttgggta tcgtttaacg gtgtgatttt tctagccata
    10381 gtaaaccttt aggagtataa agcctaaatc ttaggagtat gattttttgt ttgggagtac
    10441 aaaactaaaa gcgataaagc cttatttgaa aaggctctaa agtggtttta ggagtacgaa
    10501 tttttggggg tattccggcg tactcctaaa tatactccta aaatcttcgg atttgattgt
    10561 atcgtatagg tacgcaacgg acaataaaaa agccttgaaa cattgatttt caaggctttt
    10621 taggtatcgg ttgaaccgta taggattata atttggtgga gctgggggga tttgaacccc
    10681 cgtccgaaat ttctctacct tcagtactac atgtttagtc tagtctttaa tttcgcttat
    10741 tcacagcgga cagacacgca atgaataaac tagctttatt taatttagtg tttcgatcct
    10801 aaagcggcgg cgtccacacg atctcgtttt gggtgactta tctttgccct cgtcttacga
    10861 gcggaagctg aggagataag gctttaaagc aggttattaa gctgctaaag cgtattgttc
    10921 gtcgtttgcg actattattt tgcggtttgt ttacgaggcc taccgcacct cgacatgcac
    10981 cttgggcttc gccaatcccg tcgaatccaa aatcagcccc aaaagtagcg gtattctaaa
    11041 ggaaagcggt cgaatttgca aaaagttttg caagtggcgg aacttagcgg tattgaatag
    11101 ctcgaaataa aatcatacaa atcccacacc agatagattt aactctgtta taatgtaaac
    11161 cttgctgaga gtgaagagaa atagaatgaa aaaatttaac gagaacgaga ttgaagatgc
    11221 tgaaattata gatgccgagc cgattgatgt tgatgagata gacgaagaag aaacatcggt
    11281 agaagcaatg catccggctt tggtttccgg ctcaatgcct gtgccgcagg gcaatttgga
    11341 tagctacatc cgaatggcaa atcagtatcc gattctcacc gccgagcaag aaaaagaact
    11401 ggcggagcgt tattattatg atgaagacgt tgaggcggca aaacagctga tcctttccca
    11461 tatgcggttt gtgatccata ttgctcgtgg ctatttgggc tatggtttac cgctggcaga
    11521 tctgatccaa gagggtaata tcggcttgat gaaagcggta aaacggtttg acccgaatgt
    11581 cggcgtgcgg ttggtttctt ttgcggttca ttgggtgaaa gcggaaattc acgaatatgt
    11641 gctgaaaaac tggcgaattg tgaaagtggc aaccaccaaa gctcaacgta aattattctt
    11701 taatttacgc aaaaataaaa accgcttggc gtggtttaat gaagaagaga tcaaaaaagt
    11761 tgccgatgat ttaggggttt cagtggaaga agtacgagaa atggaatctc gaatgaccgg
    11821 acaagattta ggttttgacc tgcctgccgg tgatgacgat gaagacagct acgctccttc
    11881 tatgtatatt gaagatagca gctccaattt cgccgatgac ttggaagacg aacaacataa
    11941 tgggcaggca accgctcaac ttgcctatgc gttagccacc cttgatgaac gtagccaaga
    12001 catcatcaaa acccgctggt tagatgacaa taaagccaca ctgcaagatt tagccgataa
    12061 atataacatc tcggcagagc gggtaagaca gcttgaaaat gccgcattga agaaaatcaa
    12121 ggaagcgatt tcattagacg gctagaaatg cctacaagcg gtgatttttt tactcgctac
    12181 gctcgcactt cgtgccgtcg gcagagccaa cgttcaaacg caagcgtttg tgcaaaattt
    12241 tacgcaaaaa gcaccgcttg tattttgact aaaaatgagg atactatgat taacattacc
    12301 gataaacaaa ttgacccaac tttctaccag cgtctaccag cgagcagacg gctttattaa
    12361 cgttgccaac gctcatttaa aaaacattgc cccaaaccaa gtcagcaatg cgatgttgtt
    12421 tggttgtgcc agatttaacg cctatgttgc ggcaagcaag gcggaatata aacagcagtt
    12481 ggccgattcc agagaagaag ttattcaata ttttgtggag caatacaaag aaatgctcac
    12541 tgcaaattta gatgaatata tccaaaactt cgagcgatat attgaaggga aaaaggcgga
    12601 ttaaccgcct ttgttttgtg gtcaaacttg ttttacaaaa tcacttaaaa cttgattaat
    12661 tctactttgc caacctttac ctgaagctct aaaggcttca agaacgcttt tatcaagacg
    12721 taacgaaacc aattctttct ttgaaccagc tggtctgcca cgttttttca ttgcaattga
    12781 aaactctgat ggcgtaaccg ggcgttcatc gtcatctttt ccgtcccaaa taaaatcttg
    12841 gcttgccgga atagcttgaa tagccataag tagctgtttt ttctctaaat ttttattatt
    12901 caaagtattg ttgtaagtat tcataatatg cctctctttc tgctttagat gctcgccgaa
    12961 agctaattac tctgatgtaa tcttcccttt ctgtatatgc aagtgataat acgagtaaac
    13021 gtccaaatga atatgcaaaa gattgtattc taaattcatt gttacgaata acttcaacat
    13081 caaatcgata gggcgatgag agaacttcat ctgcatcggc aaaatctaat ccgtgcttgg
    13141 ctaaattgat tttgcgttta gtttcgtccc aagtataa
//
LOCUS       DANMCL010000082        13086 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.082, whole genome shotgun sequence.
ACCESSION   DANMCL010000082 DANMCL010000000
VERSION     DANMCL010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 13086)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13086)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13086
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.082"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            1..619
                     /locus_tag="PXF40_002095"
                     /pseudo
     CDS             1..619
                     /locus_tag="PXF40_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            871..2061
                     /locus_tag="PXF40_002096"
     CDS             871..2061
                     /locus_tag="PXF40_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000616649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine--oxo-acid transaminase"
                     /protein_id="HDL5803397.1"
                     /translation="MSTSQQLIQQTEHFGANNYLPLPIVISKAKGIWVEDPEGNRYLD
                     MLSAYSAVNQGHCHPKIVQALKDQADKVTLTSRAFYNDQLGIWYEKICKLANKEMALP
                     MNTGAEAVETAIKTARRWGYDVKGIAENQAEIIACVGNFHGRTMAAVSLSSDPDYKRG
                     FGPMLGGIKLVPYGDLEALKAAITPNTAAFLVEPIQGESGILIPPEGFLEQAYELCKE
                     NNVLFIADEIQAGLGRTGKLFATEWEGFEPDIYILGKALGGGVFPISCVLANRDILGV
                     FNPGSHGSTFGGNPLACAVSIASIDVLLEEKLAERSRELGEYFLAELKKIQNPIIKEV
                     RGRGLFIGLELHQPARPFCEKLKEKGLLCKETHDTVIRFAPPLVIEKFNLDWALEKIR
                     EVLA"
     gene            2136..3647
                     /gene="nhaC"
                     /locus_tag="PXF40_002097"
     CDS             2136..3647
                     /gene="nhaC"
                     /locus_tag="PXF40_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HDL5803398.1"
                     /translation="MLILQTFSKNQPLVKGGFMSNRTEITDQNIRIPFRYAILPVIIM
                     VSIMAVAIIKFEASPHVPLLIGAISAAVIAMAHGYRWETIEKGIYRGIRMALPAIVII
                     IMIGLTIGAWLGGGIVATMIYYGLKLISPSLFLVTISIICAIVTLAIGSSWSTMGTIG
                     VAAMGIGFSLGIPAPMVAGAVISGAYFGDKMSPLSDTTNLAAGITETNLFEHIRHMFI
                     TTVPAFLIALSVYFYFGMEFRAENLDLAKIEDIMQAMQEHFLISPWLLLVPLLVVVLV
                     AKKVPALPALAAGIILGWLCHVFVQGGDVSVAVITLHDGYKIESGHEMIDKLFNRGGI
                     ESMMYTISLTIVAMTFGGIAEQAGMLHSVVEKILTLAKSAGSLISATIVSAFITNVTT
                     SEQYISILLPGRMYIKAYRDKGLSSRNLSRALEDGGTVTSVLVPWNTCGVYAFSMLQV
                     SAFEYAPYAIMNWLIPLIAIGLATLNIKIERLPPEELAKEPEEITLPKRGCCP"
     gene            3764..7363
                     /gene="putA"
                     /locus_tag="PXF40_002098"
     CDS             3764..7363
                     /gene="putA"
                     /locus_tag="PXF40_002098"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HDL5803399.1"
                     /translation="MMSYQLLPNTTIRPELSRHYRFDEQTLVQNLIEQAHCDEQADNI
                     KKLTTQLVGKVRTARQKASGVDALMHEFSLSSQEGVALMCLAEALLRIPDTATADKLI
                     RDKIAKGDWRSHTGNSPSLFVNAAAWGLVITGKLVSTHSESSLSSALSRLIAKGGEPL
                     IRKGVDVAMRMLGKKFVTGETIQQAIKNGEKRFAMGYRYSYDMLGEAALTAEDAKRYY
                     NDYVASIHAVGATSKGLGVYKSSGVSVKLSAIHPRYSLSQHQRVMDELYPRLKELFLL
                     AKKYDIGLNIDAEEADRLELSLDLMDRLLADPDLAGFNGIGFVVQAYQKRCPYVIEHL
                     IETARKHNRQLMIRLVKGAYWDTEIKRAQMDGAEGYPVFSRKVHTDLNYIVCAKKLLA
                     AQDVIYPQFATHNAQTLATIYHLAQGKRFEFQCLHGMGESLYDQVVGSDNLNVQCRIY
                     APVGTYQTLLAYLVRRLLENGANSSFVSQIVDENLSVDDLAQAPVQKAELTNGTMHPK
                     IPLPVDLFDDNRVNSKGYDLTDAVSLQNLENALNELTKQHYRAEPQLANDNTSGQESR
                     KIYNPANQAELVGEVIDATENDMEQAFESAAAFQSEWANTSPAVRAECLEKMADLMEA
                     NMPQLFDLAVREAGKTLNNAIAEVREAVDFCRYYAKEVRNNIEAYKNPRGIVVAISPW
                     NFPLAIFVGEVSSALVAGNVVLAKPAEQTSLMAHYAVSLFYQAGVPKAALQCLPGRGK
                     TVGVALVADHRVNGVIFTGSTETAKNINRNLHKNEKIIPLIAETGGQNAMIVDSSALG
                     EQVVIDVLNSAFDSAGQRCSALRVLYLQRDVADHILTMLKGAMAELKVGLPQHLTTDV
                     GPVIDKVAQQRLLDHIENLKKSAKSYYQVAISSEIAENGIFVPPTLLEIDHISQLKHE
                     VFGPVLHVIRFDADKLDQVIADINSTGFGLTSGLHSRIDETVDLWLKSVHAGNLYVNR
                     NTVGAVVGVQPFGGMGLSGTGPKAGGPLYLQRLVNRQEWTLNGLQGNAQAVDFDLNFA
                     IRKVLSGAEQQTALDLAKSLARRSPLGKTYPMQGITGEKNEMIFVARPQIGISKGNLA
                     SQVQALIAIVTVGSQAVAEKSSELAKHASAFGKKLQVVDDFNSLDHLSTLIVLDLLSS
                     EEKLHHAERKGAILTYIEGLDLALSLLPLVHEKAISINTAAAGGNASLMSEMD"
     gene            7472..8122
                     /locus_tag="PXF40_002099"
     CDS             7472..8122
                     /locus_tag="PXF40_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISMha3 family transposase"
                     /protein_id="HDL5803400.1"
                     /translation="MRKSRLSQYKQHKLIELFVAGVIARTAAELVNVNKTTAAYYFHR
                     LRLLIYQHSPHLEMFEGEIEIDESYFGGHRKGKRGRGAAGKTAVFGLLKRDGKVYTVV
                     VPNTQSATLLPIIREKVKPDSLVYTDFYRSYDVLDVSEFNHFRINHSTHFAENQNHIN
                     GIENFWSQAKRHLRKFNGIPKAHFELYLKECEWRFNHSDLKSQIFLLKQLVKGGLG"
     gene            complement(8123..9010)
                     /locus_tag="PXF40_002100"
     CDS             complement(8123..9010)
                     /locus_tag="PXF40_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide transport protein"
                     /protein_id="HDL5803401.1"
                     /translation="MNKLTQLALISLAFTGSAFAAPKSFTYCLESSPAALNPQIATDG
                     ATLDVGQAIYNRLIDFEKGTTNLTPSLAERWEISEGGKIYTFFLRQNVQFQSNKSFTP
                     SRYFNADDVIFSINRQFDKTNPYHKLSGGNYEFFYGMNMQNIIKNVTKVDDYTVKIEL
                     SEPNAPFLANLAMDFMAIFSAEYANKMQIAGTPEKLDLEPIGTGAFQFYGYQKDAAVR
                     FTAFEHYWEGKAKIDRLVFSITPDASVRLAKLEKNECQAMPYPNPSDLSALKANKDIQ
                     LFEKSGLNIGYITFRGCPR"
     misc_feature    complement(9036..9181)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(9358..10368)
                     /gene="mglC"
                     /locus_tag="PXF40_002101"
     CDS             complement(9358..10368)
                     /gene="mglC"
                     /locus_tag="PXF40_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HDL5803402.1"
                     /translation="MSALQQNRTLDFFKQNAIYFVLLILLIVIIVQDPSFLSLRNFSN
                     ILSQSSVRLIIALGVAGLIVTQGTDLSAGRQVGLAAVISATLLQSMENMNKVFPNLSE
                     IPIPVVVLTVCAIGAVIGLFNGFVVAYLNVTPFIATMGTMIIVYGINSLYYDAVGSSP
                     IAGFSDDFSTFAQGFFRFGDFRLSYITIYAVIATIIMWTLWNKTRFGKNVFAIGGNPE
                     AARVSGVNVPLNLMGIYMLSGIFYAFGGMLEAGRIGSATNNLGFMYEMDAIAACVVGG
                     VSFAGGVGTIIGVVTGVLIFTVINYGLTYIGVNPYWQYIIKGGIIILAVAIDSLKYAK
                     KK"
     gene            complement(10382..11881)
                     /gene="mglA"
                     /locus_tag="PXF40_002102"
     CDS             complement(10382..11881)
                     /gene="mglA"
                     /locus_tag="PXF40_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005709009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HDL5803403.1"
                     /translation="MTGEVLLTMTNVSKSFPGVKALDNANLTVKSHSVHALMGENGAG
                     KSTLLKCLFGIYAKDEGDILFLGKPVNFKTSKEALENGISMVHQELNLVKQVTVMDNL
                     WLGRYPLKGPFVDHDKMYRDTKAIFDELDIDVDPRDKVAKLSVSQMQMIEIAKAFSYN
                     AKIVIMDEPTSSLSEKEVEHLFKIIQKLKDRGCGIIYISHKMDEIFKICDEITILRDG
                     KWVNTVAIKDTSMDQVVSMMVGRELTQRFPEKTNLPKEVILEVEHLTAKNQPSIQDVS
                     FSLRRGEILGIAGLVGAKRTDIVETIFGVREKAGGTIRLNDKEINNRNAFDAINNGFA
                     LVTEERRSTGIYANLSIEFNSLISNMKSYLGKFGLLSNKKMKSDTQWVIDSMNVKTPS
                     HQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDIGAKFEIYQLILELANKDK
                     GIIMISSEMPELLGVTDRILVMSNGKVAGIVETAHTSQEEILQLAAKYL"
     gene            complement(11953..12942)
                     /gene="mglB"
                     /locus_tag="PXF40_002103"
     CDS             complement(11953..12942)
                     /gene="mglB"
                     /locus_tag="PXF40_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015701875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5803404.1"
                     /translation="MKKAVLSAVAMAVALGATISTAQAENRIGVTIYKYDDNFMALMR
                     KEIEKEGKTQKVELLMNDSQNTQSIQNDQVDVLLSKGVKALAINLVDPSAYKTIIQKA
                     KSEDVPVVFFNKDPGAAAIDSYPKAYYVGTEPKESGIIQGELIAKQWKAHPELDLNKD
                     GKIQFALLKGEPGHPDAEARTKYVVESLKAQGIDSEQIFMDAALWDAAQAKDKVDAWL
                     SSGKAKDIEVIISNNDGMALGALEATKAHGRKLPIFGVDALPEALQLIKKGELAGTVL
                     NDGVNQGKAVVQLSANLADGKDAVAGTQWKLENRVVRIPYVGVDKDNLSEFLK"
BASE COUNT         3781 a         2733 c         2797 g         3775 t
ORIGIN      
        1 acataaactc attgaactgt ttgtagcagg tgtcactgct cgaacagcgg ctgagttggt
       61 gaatgtaaac aaaaccaccg ctgcctatta ctttcaccgt ttgcgattgc tcatctatca
      121 acatagccct catctggaaa tgtttgaggg tgaaattgaa gcggacgaaa gttatttcgg
      181 tggtgctcgc aaaggtaaac gagggtgtgg tgccgcaggc aaaactgccg tatttgggct
      241 gttaaaacgt gatgacaagg tttataccgt tgtcgtacca aatacgcaat ctgccacact
      301 tttgccgatt attcgggaga aagtgaagcc agacagcctt gtttacgccg atttttatcg
      361 aagctatgat gtgcttgatg tgagtgaatt taaccatttt cgtatcaatc acagcacaca
      421 cttcgctgaa aatcacaatc acattaacag aattgagaat ttttggagcc aagcaaaacg
      481 ccatttgcgt aaatttaacg gcatacctaa agctcatttt gagctgtatt tgaaggaatg
      541 cgaatagcgt tttaatcaca gtgacttaaa atctcaaatt tccattttaa aacaattggt
      601 taggggttgt ttaagttagt tatctaggac agccctaaat tttgtagttg gaatttcaac
      661 ggagaaagtt atctataaac ttacaaaagt tatagaaaat ggaggcattt ttgcttaaag
      721 tatgctatct attcatatta attgcatagt taatcaacaa ctgaagaaaa attagaagta
      781 gatcataaaa tcaacaaaaa gtccgtgctt tttagctaaa gattgttaaa ctcttttgtg
      841 ttacaagttt ttaacataaa ggagtttttt atgtctactt ctcaacaact catccaacaa
      901 accgaacatt tcggtgccaa taactaccta cctctaccta ttgttattag taaagctaaa
      961 ggcatttggg ttgaagatcc tgagggtaat cgctatttgg atatgcttag tgcctactca
     1021 gcggttaatc aagggcattg tcatccaaaa attgtacagg cactaaaaga tcaagcagac
     1081 aaagtaacgc tgacctctcg agcattttat aacgatcaac ttggtatttg gtatgaaaaa
     1141 atctgcaaac tcgctaataa agagatggca ttaccgatga atacgggtgc agaagcggta
     1201 gaaacagcga ttaaaactgc tcgccgttgg ggttatgatg tgaaaggaat tgcagaaaat
     1261 caagcagaaa tcatcgcttg tgttggcaat tttcacggac gaacaatggc tgcagtatct
     1321 ctctcgtctg atccggatta taaacgtggt ttcgggccga tgttaggtgg catcaaactt
     1381 gttccatacg gtgatttaga agcattaaaa gctgcgatta caccaaacac agcagcgttt
     1441 ttggttgagc caatccaagg tgaatctggc attcttattc cacctgaagg tttcttggaa
     1501 caggcttatg aactatgcaa agagaataat gtgctgttta ttgctgatga aattcaggca
     1561 ggtcttgggc gtactggcaa gttatttgca acagaatggg aaggctttga gccagatatt
     1621 tatattctag gtaaagcact tggtggcggg gtgttcccaa tctcttgtgt gttagcaaat
     1681 cgtgatattt taggcgtatt caatcctggc tcgcacggtt cgacatttgg tggtaatcca
     1741 ttagcctgtg cggtatctat tgcctcaatt gatgtactgt tggaagaaaa acttgcagag
     1801 cgttcccgtg agttaggtga atacttcttg gcagagctga aaaaaatcca aaatccaatt
     1861 attaaagaag ttcgtggacg tggactgttt attggcttgg agttacatca accagcacgc
     1921 ccattctgcg aaaaactcaa agaaaaaggc ttactctgca aagagaccca cgatacagtt
     1981 atccgctttg ctcccccttt ggtgattgaa aaattcaatt tggattgggc attggagaaa
     2041 attcgggagg tgttggctta attgtcattt tctctatatt ttatcctgcc aaatcgcctt
     2101 taaccctttt tggcaggaag caaaacagtt gtaaaatgct gattttgcaa actttttcca
     2161 aaaatcaacc gcttgtaaaa ggtggcttta tgtcaaacag aacagaaata acagaccaaa
     2221 atatccgaat cccgtttcgc tatgctatat tgcctgtgat tattatggta tcgattatgg
     2281 cggtggctat catcaaattt gaagcctcac ctcacgttcc gttgcttatt ggggcaatta
     2341 gtgccgctgt gattgcaatg gcacatggct accgttggga gacaattgaa aaaggaattt
     2401 atagaggcat tcgtatggct ttaccagcga ttgttatcat tattatgatt gggctaacca
     2461 tcggagcttg gctaggtggt ggaattgtag ctacgatgat ttactacggc ttgaaattga
     2521 tctctccgtc gctgttttta gtaactatct caataatttg tgctattgtg acccttgcga
     2581 ttggtagctc gtggtctaca atgggaacaa tcggtgtagc ggcgatgggg atcgggttta
     2641 gtctcggcat tccggcaccg atggttgccg gtgcggtgat ctcaggagca tatttcggcg
     2701 ataaaatgtc gccactgtca gacactacca atctggcagc agggattacc gaaaccaatc
     2761 tgtttgaaca tatccgccat atgtttatca ctaccgtgcc ggcgttcctg attgcgttat
     2821 ctgtctattt ctattttggt atggaattta gagccgaaaa tctcgatctt gctaaaattg
     2881 aagacattat gcaggcaatg caggaacatt tcttgatttc gccttggttg ctattagtgc
     2941 ctttattagt cgtggtgttg gtggcaaaaa aagtgcctgc cttaccggca ttagctgcag
     3001 ggataattct tggttggctc tgccacgttt ttgtgcaagg cggtgatgtc agcgtagcag
     3061 tgattactct gcacgacggc tataaaattg agagcggcca cgagatgatt gataagctgt
     3121 tcaaccgtgg tgggatcgag tcgatgatgt acaccatttc ccttacgatt gttgcgatga
     3181 cttttggtgg cattgcagag caagctggaa tgttacattc agtagtggaa aaaatcctta
     3241 cccttgcaaa atcagcaggt agcttaatta gtgctacgat tgtatcggca tttattacca
     3301 acgtaacgac atctgagcaa tatatttcta ttttattacc aggcagaatg tatataaaag
     3361 cctataggga taagggacta agttcgagaa acctttctcg tgcattggaa gacggaggaa
     3421 cagttacttc ggttcttgta ccttggaata cctgtggtgt ttatgcgttc tcaatgttgc
     3481 aagtgagtgc ttttgaatat gcaccgtatg caataatgaa ttggctcatt ccactgattg
     3541 cgattggctt ggcaaccttg aatatcaaaa ttgagcgatt gccaccggaa gaattagcca
     3601 aagaacctga ggaaattact ctgccaaaac gtggttgttg tccataattt atctaaatag
     3661 tatttaataa caataggtta agttaaataa caagcggtcg gttttatctt aaaatttgca
     3721 agtttataca taaatttgat cgcttgctgt atagaaagga aaaatgatgt cataccaact
     3781 tttacctaac accactatcc gtcctgaatt gagccgtcat taccgctttg atgagcaaac
     3841 cctggtgcaa aatctgatag aacaagcaca ttgtgatgaa caggctgata acattaaaaa
     3901 gctcactacc caattagtcg gtaaagtccg aactgcacgc cagaaagcaa gcggggttga
     3961 tgcgttaatg cacgaatttt cactctccag ccaagagggg gtggcgttga tgtgccttgc
     4021 cgaagcatta ctacgcattc ctgacaccgc cactgcggat aaattaattc gagacaaaat
     4081 tgccaaaggg gattggcgtt cacacaccgg caacagcccc tctctgtttg tgaatgcagc
     4141 ggcgtggggc ttggtgatta ccggcaaatt ggtttcaacc cacagcgaaa gctcactctc
     4201 atcagcactt tcacgcctga tcgccaaagg cggagaaccg ctgatccgca aaggtgtgga
     4261 cgtagcaatg cgtatgctcg gcaagaaatt tgtaacgggc gaaaccattc aacaggcgat
     4321 taaaaacggc gaaaaacgct tcgcaatggg ttatcgttac agctacgata tgctgggcga
     4381 agcggcactc accgccgaag atgccaaacg ctattacaac gactatgttg cctctattca
     4441 cgctgtgggt gccacctcga aaggcttggg cgtgtataaa tcctcgggtg tgtcggtcaa
     4501 actctccgcc attcaccctc gttattccct ttcccaacac caacgtgtga tggacgaact
     4561 ctatccacgt ctgaaagaac tgttcttgct ggcgaaaaag tatgacatcg gcttgaacat
     4621 tgatgccgaa gaagccgacc gcctcgaatt gtcgcttgat ttgatggaca gactgcttgc
     4681 cgaccctgat ttggcagggt ttaacggcat tggttttgtg gtgcaggcgt accaaaaacg
     4741 ttgcccgtat gtgatcgagc atttaattga gaccgcccgt aaacataatc gccagctaat
     4801 gattcgcttg gtaaaaggcg catattggga cactgaaatc aagcgggcgc aaatggacgg
     4861 tgcagagggc tatccggtct tctcccgtaa ggtgcatacc gatttgaact acatcgtttg
     4921 tgccaaaaaa ttgctggcgg cgcaagatgt gatctatccg caatttgcca cccacaacgc
     4981 tcaaactctc gccaccattt accacttggc acagggcaaa cgttttgagt ttcaatgctt
     5041 gcacggtatg ggagagagct tgtacgacca agtggttggc agcgataatc ttaacgtgca
     5101 atgtcgcatt tatgcccctg tcggtactta tcaaaccctg cttgcctatt tagtacgtcg
     5161 cttgttggaa aacggagcga acagctcatt tgttagccaa attgtggatg aaaatctcag
     5221 tgtagatgat ctggctcaag cccctgttca aaaagcagaa ctgaccaatg gcactatgca
     5281 cccgaaaatt ccattgccag tcgatttatt tgacgacaat cgtgttaatt ccaaaggcta
     5341 tgatttaact gatgcagtaa gcctacaaaa tttagaaaat gccctcaatg aacttaccaa
     5401 acagcattac cgtgctgaac cacagctggc aaatgataat acaagcggtc aagaaagccg
     5461 aaaaatttac aatccagcga accaagctga attagtcggc gaagtgattg atgccaccga
     5521 aaacgatatg gaacaggcgt ttgaaagtgc ggcggcgttc caaagtgaat gggcgaatac
     5581 ttcccctgcg gtgcgtgccg agtgcttaga aaaaatggcg gacttgatgg aagccaatat
     5641 gccacaactg ttcgatttgg cggtgcgtga ggcaggcaaa acgctcaaca atgcaattgc
     5701 tgaagtgcgt gaagccgtcg atttctgtcg ttattatgcc aaagaggtac gcaacaacat
     5761 tgaagcatac aaaaatccgc gtggcattgt agtagcaatt agcccgtgga actttccgtt
     5821 agcgattttt gtgggtgaag tttcatctgc gttggtggca ggcaatgtgg tactagcaaa
     5881 accagctgaa caaacttcgt taatggcaca ttatgctgtc agccttttct accaagcagg
     5941 tgtgccgaaa gcggcgttgc aatgcttacc gggtagagga aaaacggttg gggtggcgtt
     6001 ggtggcagat catcgtgtga acggcgtgat ttttactggt tcaacagaga cagctaaaaa
     6061 cattaaccgc aatttgcaca aaaacgagaa aattataccg cttattgccg aaactggcgg
     6121 acaaaatgca atgattgttg atagctcggc actgggcgag caggttgtga tagatgtttt
     6181 aaactccgca tttgactcag cagggcaacg ttgttcggca ttgcgtgtgc tgtatctgca
     6241 acgtgatgtt gccgatcaca ttctcacaat gctcaaagga gcaatggcgg agttgaaagt
     6301 tggtcttcca caacacttaa ctaccgatgt cggaccagta atcgataaag tcgcacaaca
     6361 acgcttgctc gatcatattg aaaatctcaa aaaatcggcg aaaagttact atcaggtggc
     6421 tatctcctct gaaattgccg aaaatggtat tttcgtaccg ccaacgctgt tagaaataga
     6481 tcatatcagc cagcttaaac acgaagtatt cggaccggtg ctacacgtta tccgttttga
     6541 tgcggataaa ctcgaccaag tgattgccga cataaactcc acaggtttcg gtctaaccag
     6601 cggtttgcat agccgaattg atgaaacggt ggatttatgg ttgaaatctg tccacgctgg
     6661 aaatctgtat gtaaaccgta acacggtagg ggctgtggtc ggcgtacagc cattcggtgg
     6721 aatggggtta tcaggaactg ggccgaaagc tggcgggccg ctctatctac aacgtttagt
     6781 aaaccgccaa gaatggacat tgaacggttt acagggcaat gcacaagcgg tcgattttga
     6841 cttaaatttt gcaatccgca aggttctaag tggagctgag cagcaaacgg cgttagatct
     6901 ggccaaaagc cttgcacgcc gctcgccact cggaaaaacc tacccaatgc agggtattac
     6961 cggcgagaaa aacgagatga ttttcgtggc tcgcccacag attgggatta gcaaaggtaa
     7021 tttggcttca caggtgcaag ccttgattgc cattgtaacg gtcggcagcc aagcggtggc
     7081 agaaaaatca agcgagctgg caaaacacgc ctctgccttt ggtaagaaat tacaggtggt
     7141 ggatgatttc aacagtctcg atcacctcag cacactcatt gtgcttgacc tgctttctag
     7201 tgaggaaaaa ttgcatcatg ccgaacgcaa aggggcgatt ttgacctaca tcgaagggct
     7261 ggatttagcg ctctcactgc tgccgttggt acacgagaaa gcaatcagca tcaacaccgc
     7321 tgccgcaggg ggaaatgcca gcttaatgag tgaaatggat taagcaacaa acaaaagagt
     7381 ataagagggc agatcacaat gatctgcctt tttattttaa ggggctgtcc tagataacga
     7441 ctaaaacttc catttaggtt aagataaccc tatgagaaaa agtcgtctaa gtcagtacaa
     7501 acaacataaa ctcatagagc tgtttgtagc aggcgtaatc gctcgaacag ccgcagagtt
     7561 agtgaatgta aataaaacca ccgcagccta ttattttcac cgtttgcgat tgctcatcta
     7621 tcaacatagc cctcatttgg aaatgtttga gggagaaatt gagattgatg agagctattt
     7681 cggcggtcat cgcaagggta aacgaggtcg tggtgcagca ggcaaaaccg ccgtattcgg
     7741 gcttttaaag cgtgacggca aggtttatac cgtagtagtg ccgaacacac aatctgctac
     7801 acttttgccg attattcggg aaaaggtgaa gcccgatagc cttgtttaca ccgattttta
     7861 tcgaagctat gatgtgcttg atgtgagtga atttaaccat tttcgtatca atcacagcac
     7921 acacttcgca gaaaatcaaa atcacattaa cggaattgag aatttttgga gtcaagcaaa
     7981 acgtcattta cgcaagttta atggtattcc gaaagcccat tttgagctat atttgaaaga
     8041 atgcgaatgg cgttttaatc acagtgactt aaaatctcaa atattccttt taaaacaatt
     8101 ggttaaaggg gggttaggtt agttatctag gacagcccct aaaagtaata taaccgatat
     8161 ttaggcctga cttttcaaat aattgaatat ctttattcgc ttttaaagca gacaaatctg
     8221 acgggttcgg ataaggcatc gcttggcatt cgttcttctc caatttagct aaacgtactg
     8281 aggcatcggg cgtaatacta aatacaaggc gatctatctt cgcttttcct tcccaatagt
     8341 gttcaaatgc tgtaaatctt accgctgcgt ccttttggta accatagaac tggaatgcac
     8401 ctgtgcctat aggttctaaa tctaattttt ccggcgtacc cgctatttgc attttatttg
     8461 catattccgc agaaaagatc gccataaaat ccatagctaa attagcaaga aagggggcat
     8521 tcggttcaga taattcgatt tttaccgtgt aatcatctac ttttgttaca tttttgatga
     8581 tgttttgcat attcattccg tagaaaaact catagttacc gccggacaat ttgtgatatg
     8641 gattcgtctt atcaaactga cggttaatcg aaaaaataac atcatcagca ttaaaataac
     8701 gactaggggt aaaactttta ttactctgga actgcacatt ctgacgcaag aaaaaagtat
     8761 aaatttttcc gccttcactg atttcccatc gctctgccag agaaggagtg aggttagtgg
     8821 tacctttttc aaaatcaatc aggcgattat agattgcttg cccgacatca agagtagctc
     8881 catctgttgc aatctgagga ttcaatgctg ccggagatga ttccaaacag taagtaaaag
     8941 atttaggtgc tgcgaaagca gaacctgtaa atgctaaaga aataagtgca agttgtgtca
     9001 gcttgttcat tgtcatatcc ttaaatgtta agcaataaaa aaccctttca aaagttgcct
     9061 tccgaaaggg ttagaattgg gtttgcgatt ttggattgcg tttgccattt caggttttcg
     9121 gaagatatct tccgaacacg ccaaatgccc gaaagattaa tcggtcaaat ggtagtgatg
     9181 atgtttaacg caatagctca taatattctc caaaattgaa tgtttaggaa tttacgcttt
     9241 ttaaaaatca attgcaaacg ttttctttaa aattttgtaa aaaattcaac atttttcacc
     9301 gcttgtatcg tacctaggag caaatggcga tttgctccta ggtttccaag caataggcta
     9361 ttttttcttc gcatatttaa gtgagtcaat cgctaccgcc aagataatga tgccaccttt
     9421 aataatatat tgccagtaag ggtttactcc aatataggtt aagccgtagt tgataacggt
     9481 gaagattaac acccctgtta ctacaccgat gatagtaccc acaccaccgg caaaggatac
     9541 cccacctacc acacaagcgg caatggcatc catttcatac ataaagccta agttgttggt
     9601 tgcactaccg atacgacctg cttctaacat accgccgaag gcatagaaga tgcctgaaag
     9661 catataaata cccatcaggt taagcggtac gtttacaccg gaaactcgtg ctgcttcagg
     9721 gttgccgcca atagcaaata cgtttttacc gaagcgggtt ttattccata acgtccacat
     9781 aataatggta gcaatcacgg cataaatagt gatgtaggat agcctaaagt cgccaaagcg
     9841 gaagaagcct tgtgcaaagg ttgagaaatc atcgctaaag cctgcaattg gcgatgagcc
     9901 tactgcatcg tagtaaagcg agttgatacc atacacaata atcattgttc ccatcgtggc
     9961 aataaacggt gttacgttga ggtaagccac cacaaagccg ttaaataaac caatgacagc
    10021 accgatggca cacacggtta atacaaccac aggaatcggg atttccgaga ggtttgggaa
    10081 taccttgttc atattttcca ttgattggag caaggtggcg gaaattaccg ctgccaagcc
    10141 cacttggcga ccggcagata agtctgtccc ttgtgttaca atcaagcctg caacccctaa
    10201 tgcaataatc aaacgcacag aagattgcga taaaatgtta ctgaagttac gcaagctcaa
    10261 gaaacttggg tcttgcacaa taatcacaat aagtaagatt aataatacga agtaaatcgc
    10321 attttgttta aaaaaatcga gtgttctatt ttgttgtaaa gcagacatac ttcactcctt
    10381 gttataaata ttttgctgcg agttgcaaga tttcttcttg cgaggtgtga gcggtttcga
    10441 caatacctgc aactttcccg ttactcatca ctaaaattcg gtctgtgacc ccaagcaatt
    10501 ccggcatttc cgatgaaatc ataatgatgc ctttatcttt attcgccagc tctaaaatca
    10561 actggtaaat ttcaaatttt gccccgatat cgataccacg ggtcggctcg tcaagcatca
    10621 agatttcagg ctgggttaac aaccaacgcc cgataatcac tttttgttgg ttaccgccgg
    10681 aaagtgagcc aatatgcgtt tgatgcgatg gggtttttac attcatcgaa tcaattaccc
    10741 attgggtatc gcttttcatt tttttattgc tcagtaagcc gaacttgcct agataagact
    10801 tcatatttga aatcagagag ttaaactcaa tgcttaagtt ggcataaatc cctgttgaac
    10861 ggcgttcttc tgtaaccaat gcaaagccgt tattaatcgc atcaaaagcg ttgcggttat
    10921 tgatttcttt atcgtttagt cggatagtgc cgcctgcttt ctcccgtaca ccgaaaatgg
    10981 tttcaacaat atcagtccgt tttgctccaa ctaagccggc gatgcctaaa atttcccctc
    11041 tgcgtaagct aaagctgaca tcttgaatag agggttgatt ttttgccgtt aaatgctcaa
    11101 cttcaagaat cacttctttc ggcagattgg ttttttcagg gaaacgctgg gtcagctcac
    11161 gccctaccat cattgaaacc acttgatcca ttgaggtatc tttaattgca acggtgttta
    11221 cccatttacc gtcacgcaaa atggtaattt catcacaaat tttaaaaatt tcgtccattt
    11281 tgtgtgaaat atagataatg ccacagcctc tgtctttcag tttttggata attttaaata
    11341 aatgctcgac ttctttttct gaaagtgacg aagttggttc gtccataatc acaattttgg
    11401 cattgtaaga gaaagctttt gcaatctcga tcatctgcat ttgtgaaacc gataatttgg
    11461 ctactttatc acgtggatca acatcaatat ctaattcatc aaaaatcgcc ttagtatcac
    11521 gatacatttt atcgtgatct acaaaaggcc cttttagtgg gtaacgacct agccataagt
    11581 tatccattac cgtcacttgt tttactaggt tcaactcttg gtgaaccatt gagatcccat
    11641 tttctaacgc ctcttttgag gtcttaaaat tcaccggctt gccaagaaag agaatatctc
    11701 cctcatcttt agcataaatc ccaaataagc atttcagtaa cgttgattta cctgctccat
    11761 tctctcccat taaggcgtga acactatggg atttcaccgt taagttagca ttatctaagg
    11821 cttttacccc gggaaatgac ttgctaacat ttgtcattgt gagtaaaact tcacctgtca
    11881 tatctcaccc ctgattacat cgaaaaatcg aaaaaaagca cgggtatcca tcacccgtgc
    11941 taaaagcgtg aattatttta aaaattcaga taagttgtct ttatcgacac caacgtaagg
    12001 aatacgcacc acacggtttt ccaatttcca ttgtgtacca gcaactgcat ctttaccgtc
    12061 tgctaagtta gcagaaagct gaacaaccgc tttaccttgg tttacaccat catttaatac
    12121 cgtaccggct aattcacctt ttttgattaa ttgaagtgct tctggcaatg catctacacc
    12181 gaagattggt aattttctac cgtgagcttt ggttgcttct aatgcaccta acgccatacc
    12241 atcattatta gaaataatta cttcgatgtc tttcgcttta ccacttgata accaagcatc
    12301 cactttatct ttagcttggg ctgcatccca taatgctgcg tccataaaga tttgctcact
    12361 gtcgatacct tgtgctttta agctttctac cacatattta gtacgtgctt ccgcatcagg
    12421 gtgacccggc tcacctttta ataaggcaaa ttggatttta ccgtctttat tcaagtctaa
    12481 ttcaggatgg gctttccact gttttgcaat taactcacct tgaataatgc ctgactcttt
    12541 cggctcagta cctacataat aagctttcgg atagctatca atcgcagctg cacccgggtc
    12601 tttattgaag aacaccacag gcacatcttc actttttgct ttttgaataa ttgttttata
    12661 agctgatgga tccactaagt taattgctaa tgctttaacc cctttagaaa gtaatacatc
    12721 aacttggtcg ttttgaatag attgcgtatt ttgcgagtca ttcattaata actcgacttt
    12781 ttgtgtttta ccctcttttt cgatttcttt acgcattaat gccataaagt tatcgtcata
    12841 tttataaatt gttacaccaa tacggttttc agcttgagct gtactgatcg ttgcacctaa
    12901 tgcgactgcc attgccactg cacttaatac tgctttcttc atagtagatc acctctttta
    12961 tgtgtttata gggaaatgaa ttgcttacca taagcaactt ggtgcaaagt ataactaatt
    13021 ttaaaaaaac aatccgtgat cattctcaca gaattaagac aaagtggaga aatttttaat
    13081 tttaag
//
LOCUS       DANMCL010000083        12661 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.083, whole genome shotgun sequence.
ACCESSION   DANMCL010000083 DANMCL010000000
VERSION     DANMCL010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12661)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12661)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12661
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.083"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            233..451
                     /locus_tag="PXF40_002104"
                     /pseudo
     CDS             233..451
                     /locus_tag="PXF40_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390712.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
     gene            complement(503..718)
                     /locus_tag="PXF40_002105"
     CDS             complement(503..718)
                     /locus_tag="PXF40_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803405.1"
                     /translation="MQTEKRGRGRPKSGLTLQELQAKSDAKRGVRLKSFKFHEDFIAQ
                     LEQLAEQHGISQTQVIVQAVEQFSKGA"
     gene            1263..1964
                     /locus_tag="PXF40_002106"
     CDS             1263..1964
                     /locus_tag="PXF40_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803406.1"
                     /translation="MSTQISTQTISFNNQALITFEQNGTHYTAMKPICENIGLTWHAQ
                     YERIKRDEILSQGILIIRIPTNGGDQQMICLPIEYLNGWLFGIDINRCKPEIRETLIK
                     YKKECYQALHDYWFKGKAERSQIAPIVEPKIPMELTKKEWLRFASMWYALYNSLEVLA
                     TLEKPLRAIGSPFGATAYTHATEYQTTLGVMKRILEPMLADFEVDPFEEAHYHKALTT
                     LRQYQPKGLGGLVRI"
     gene            2218..2394
                     /locus_tag="PXF40_002107"
     CDS             2218..2394
                     /locus_tag="PXF40_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803407.1"
                     /translation="MTEEDKEYLQTKIENEGFEYAFVSYSDFEEVQDEKFHGLRKAYL
                     KARSELAEYIDIED"
     gene            2482..2865
                     /locus_tag="PXF40_002108"
     CDS             2482..2865
                     /locus_tag="PXF40_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803408.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEEDQIRCPKTYAKL
                     REILEANEENVVRIGNVSISIGSTT"
     gene            2915..3136
                     /locus_tag="PXF40_002109"
     CDS             2915..3136
                     /locus_tag="PXF40_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HDL5803409.1"
                     /translation="MNIYTDFLSREEIEFITQCKQKNLIKKQLNIMGIPFKENANGFP
                     VVRRDYAQAKQRKPIATNDSDWVSNAFKA"
     gene            3158..4198
                     /locus_tag="PXF40_002110"
     CDS             3158..4198
                     /locus_tag="PXF40_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5803410.1"
                     /translation="MARPRKYENNGLPQNLLCRRRKRANGSIVEYYFYVLADGKERSL
                     GTNKHEAILEAAKLNFENSRKSPIVLFIDVAKRYELEVVPTKKAKNTRQSNLQAIHWL
                     CKFFGNPPAPLEKIEPKHISQYLQWRKDTPAVANIEVGLFNTIWNMAREWGYTALPSP
                     SQGVKKFPTKYREVYVEDYILDKIYEFADERMADIIETAYLLGQRPIDICNIHRSHIY
                     DGILHITQQKTGKKVRFEISGRLKEILDKRLGYESDWIFTNKWGKKLKRRSLGDHFKE
                     IRERAMKAYPELADEIAKVQMRDMRAKAATDISLMTTDEQAQKQLGHTSKRMTHHYIR
                     KDKILKPTDEIT"
     gene            complement(4357..4644)
                     /gene="rplY"
                     /locus_tag="PXF40_002111"
     CDS             complement(4357..4644)
                     /gene="rplY"
                     /locus_tag="PXF40_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005625668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HDL5803411.1"
                     /translation="MSFKFEAEVRSAQGKGASRRLRHNGQVPAIIYGGNAEPVSIILD
                     HDKVNNAQVHDSFYNEVLTIVVAGKEEQVKVQAIQRHPTKPKLVHLDFKRA"
     gene            complement(4796..6064)
                     /locus_tag="PXF40_002112"
     CDS             complement(4796..6064)
                     /locus_tag="PXF40_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HDL5803412.1"
                     /translation="MSDLKQQALDFHEFPIPGKISVTPTKALDTQHDLALAYSPGVAE
                     PCLAIEKDPSASYRYTARGNLVAVISNGTAVLGLGNIGALASKPVMEGKGVLFKKFAG
                     IDVFDIEINETDPEKLVEIIASLEPTFGGINLEDIKAPECFYVEQKLRERMGIPVFHD
                     DQHGTAIITGAAVINGLQVVGKAISEVRLVVNGAGASAIACTNLLRSLGVKKENITMC
                     DSKGVIFQGRGDKMDETKQFYAIEDNGWRTLADAVANADVFLGCSKGGALTQEMVKTM
                     AKDLLILALANPVPEITPAEAKAVRPDAIVCTGRSDFKNQVNNVLCFPFLFRGALDVG
                     AKTINEEMKMAAAHAIAELAKEPVPFEVISTYGELSFGPEYIIPTPFDPRLIVNVSIG
                     VAKAAIQSGVATRPITDWEAYAEQLKKLVA"
     gene            complement(6221..7132)
                     /locus_tag="PXF40_002113"
     CDS             complement(6221..7132)
                     /locus_tag="PXF40_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HDL5803413.1"
                     /translation="MKWLMLCREPRLYSCCRIKAACEAKGIELDILDQNRMLLGLENG
                     EFKIYYQAGESYDNNRPEPVLLPNYDGILPRFGTGSTEMGCSVLRHFEAKGIPVLNHS
                     AAFALARDKWRTLQKLAKHNLPVPNTNFAGHLVSVKSQLNQFAFPLISKVLNGSQGNG
                     VMLFEGKNNAEAVLATFRQVNEPYLCQQFVGDAKGQDIRAFVIGNEVVAAMSRTSVTG
                     DFRANIHQGGTAQPIELTQMERALAIKATKTIGLDIAGVDFLRTEKGVVILEVNASPG
                     FEGIERVNDVDIASEMVSYFINKMKNA"
     gene            complement(7129..7848)
                     /gene="nfsA"
                     /locus_tag="PXF40_002114"
     CDS             complement(7129..7848)
                     /gene="nfsA"
                     /locus_tag="PXF40_002114"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HDL5803414.1"
                     /translation="MQSKPTLETILSHRSIRKFTEQPISEEIFQILIEAGKAASSSNH
                     LQCVTVIRVTDRQIRETLKAVSGMQYVVDCAEFLVFCIDFNKHKQLVPESQLEWAEVS
                     LIGAVDTGILAQNVFLAAESLGLGAVYIGALRNDIERVSKALNLPEYCVPLVGMCLGY
                     PAQEPAIKPRLPNSLVCYNNQYQDFDWTEFAKYNENLTAYYQARIGEPQQWQAAIHKT
                     LDKPVRPHILPFFNQKGLLKK"
     gene            complement(7860..8645)
                     /gene="mtgA"
                     /locus_tag="PXF40_002115"
     CDS             complement(7860..8645)
                     /gene="mtgA"
                     /locus_tag="PXF40_002115"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HDL5803415.1"
                     /translation="MEQSMAKRNKRFLSSLLKKIGLFFIPRKIKSKLGWLWFGSSRLL
                     TFGGTFFLIPILIFSVLPVPYSAYMVQKKVENLVQGKSYPIKKEWVSLNEISWQMQMA
                     VIASEDQKFESHFGIDLQAIETALKLNAKSKKVRGGSTISQQTVKNMFLWHGQSWLRK
                     GIEVPLTLLVENVWSKDRILEVYLNIAEFGNGIFGVEAAAKHFFKKSAKQLTLQESAL
                     LAASLPNPLVFRVDKPGPSMRKRQAWIMRQVSLLDGKNYLDKL"
     gene            complement(8620..8940)
                     /gene="trpR"
                     /locus_tag="PXF40_002116"
     CDS             complement(8620..8940)
                     /gene="trpR"
                     /locus_tag="PXF40_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HDL5803416.1"
                     /translation="MKTLYNQRDPNEWTQFLALLEQAVAEDKLEPFFSMFLTADERGS
                     LGLRLQIVQALLKGEDSQREIQQNLNTSAATITRGSNMLKTLDQDFLQWLNGKVNGTV
                     NGKA"
     gene            complement(9020..9661)
                     /gene="lolA"
                     /locus_tag="PXF40_002117"
     CDS             complement(9020..9661)
                     /gene="lolA"
                     /locus_tag="PXF40_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005600572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HDL5803417.1"
                     /translation="MKTLFKKSVFGLALFGLANVALADAQSVAELQRRLEQVSQYSAD
                     FDQTVRSSKGKQIQQGKGKFQVKRPNLFRMDTKSPQENLIVSDGKDLWFYDPFVSQVT
                     VNTVQDAVNNTPFVLLTSGDKSHWDQYDVSQSADTFVLKPKSKKSNLKQFDVRIDQSG
                     LLKGFSTIERDGQSNLYVLRNITTGGVSSDLFKFSVPKGAELDDQRGGKKSKK"
     gene            complement(9772..12630)
                     /gene="polA"
                     /locus_tag="PXF40_002118"
     CDS             complement(9772..12630)
                     /gene="polA"
                     /locus_tag="PXF40_002118"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005611716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HDL5803418.1"
                     /translation="MATIAKNPLVLVDGSSYLYRAFHAFPPLTNRLGEPTGAMYGVLN
                     MLKSLISQVNPSHIAVVFDAKGKTFRDELFKQYKSHRPPMPDDLRPQIEPLHRIIKAL
                     GIPLISIEGVEADDVIGTLAVQAAKDGKDVLISTGDKDMAQLVNDHIMLINTMNNTLL
                     DREGVIEKYGIPPELIIDFLALMGDSADNIPGVKGVGEKTALALLQGIGSLEQIYANL
                     DQIATLSFRGAKNFAPKLEAEKANADLSYLLATIKTDVELDVTHDQLLTQPQDRAELA
                     QLFEHYEFKRWLNEVNQNANPVTQTSAEKVPNNYQVTQAVRNEENVANVVEIDRSKYE
                     TVDTEQKLSAWIEKLTAARLIAVDTETDSLDAMSANLVGISFALENGEACYIPLGHKQ
                     KAQPQQADMFGDEERSESPSSDELVKNQLNLTACLSKLKPILLNPEIKKIGQNIKYDL
                     TIFANYGIELQGVAFDTMIESYTQNSTGRHNMDDLAARYLGHKTIPFEELAGKGKNQL
                     TFDKIEIAKAAEYAAEDADVTMKLHQVLWEKLQQEPELVKLFDEIEMPLVGVLSRIER
                     NGVLIDPKKLLTQSAEIEKRLEEVETLVHAEAGQTFNLASTKQLQEILFEKLGLPVLK
                     KTPKGAPSTNEEVLDELAQQGHLVPKLLMEHRGLSKLKSTYTDKLPQLINKKTGRVHT
                     SYNQAVTATGRLSSSDPNLQNIPIRNEEGRRIRQAFVAREGYKIVAADYSQIELRIMA
                     HLSNDEGMINAFAEGKDIHRATAAEIFGVELGEVTSEQRRSAKAINFGLIYGMSSFGL
                     SNQLGIGRAEAQKYMDLYFQRYPAVQQFMTDIREVAVEKGYVETLFGRRLYLPDIKSG
                     NAILRKAAERVAINAPMQGTAADIIKVAMIGIDNAIRDNDEIKMIMQVHDELVFEVKA
                     DKIDHYSQLIKTEMEKAISLKVPLIAEVGVGENWDEAH"
BASE COUNT         3782 a         2814 c         2380 g         3685 t
ORIGIN      
        1 gagtcctgat tgattagcca ttgtttgaaa agctctttca tagtgttctc cttatatttt
       61 tttatgagat tactacgaaa gcgttttact gtcagaacaa aaatttattt tttcgatgca
      121 gatcgcaaaa atagatattg aggcttgaca ccgccaaact tcggattaag ataaccgcac
      181 tttcaagccg tccaccaacg gctttttttg tacctaaaaa cggagaaacg aaatggcaaa
      241 tagcgtaatg attgtacaag gcgtggaggt caaagtaacc gctcgtgatg gtgaggatta
      301 catcagccta actgatatgt gcaaagcttt tggagacagc gaccagctca ttaaaaactg
      361 gcttcaaaat aaaaatacca ttgaatttct tcaagtttgg gaagagctga ataatccaaa
      421 ttttaatttg gtggaattac accaaattaa atgcaacaac taattaaaaa catcgaacag
      481 tgaagggtag gtttataggg gcttacgccc cttttgaaaa ctgctcaacc gcttgaacga
      541 ttacctgtgt ttgcgaaatg ccgtgttgtt ctgcaagctg ttcaagttga gcaataaaat
      601 cttcgtggaa cttgaatgac ttcaatcgca caccacgctt tgcatcgctt tttgcttgta
      661 attcttgaag cgttaaacct gatttagggc gaccacgacc tcgtttctct gtttgcattg
      721 tcaattcctt gttgattttt aatacggaac gttatattat ttaggaactg cctagcagag
      781 atggcgttct ctgctaggac ttttagcttt ctaatctaat aagctggcgt gcttattaag
      841 attaagatca ctaggattaa caacttaaga tacataatcc agttcctgat gtttgccgct
      901 ctcttcaagg gcggcttctt cattttcaga ccctttccga aaacaagatt attttaatac
      961 ataccaaata aaacgcaagc tattttttag tatttattaa aataatttta tttgacaacc
     1021 gccaaacttt aacttactat tccgcccaag gtgtcgaaac ctcatactct aaggcggata
     1081 gttcactaat cgccactagg cgattttttt atatccgtaa tcctgactat gtcgggaggg
     1141 cgactaatac aagaccgaaa ggaaatacgt ccagccctta ccttagagtg ggttttcgaa
     1201 cctcccgacg ccactgtcga aagtggcttg ttttaaacaa atagactcta aggattacga
     1261 ctatgtcaac tcaaatttct actcaaacca tttctttcaa caaccaagcc ttaatcacat
     1321 tcgagcaaaa cggcacacat tacaccgcaa tgaaaccgat ctgcgaaaat atcggcttga
     1381 cttggcacgc tcaatacgaa cggatcaaac gagatgaaat cctttcgcag ggtattctta
     1441 tcataagaat acctacaaac ggtggcgatc aacaaatgat ctgcctccca attgaatacc
     1501 tcaacggctg gctcttcggc attgacatca atcgctgcaa acccgaaatc agagaaacgc
     1561 tcatcaaata caaaaaagag tgctaccaag ccctgcacga ttactggttc aagggcaaag
     1621 cggaacgttc acaaatcgcc ccgattgtcg aacctaaaat cccaatggag ctaaccaaaa
     1681 aagaatggct acgtttcgct tcaatgtggt acgccctcta caacagcctt gaagtacttg
     1741 ctacgttaga aaaaccgttg cgtgctatcg gttcgccgtt tggggcaacc gcctacactc
     1801 acgccaccga gtatcaaacc acgcttggcg taatgaaacg gatacttgaa ccgatgttag
     1861 ccgacttcga ggtcgatccg tttgaagaag ctcactacca caaagcccta actaccttaa
     1921 ggcaatacca gccgaaaggc ttaggcggct tagtccgaat ttaatttgca aaaaaatcac
     1981 acaatccgac cgcttgtgaa acatcaagcg gcggtttcct gcacccaaaa ttcaaggatt
     2041 aggcgatgaa atacgcaaaa atcatactct ttttaaccgc ctttgcagtt gctgccgact
     2101 acttagagtt acacaacgac tgcgatggca aaccatgcac tatcgcacag cgataatgct
     2161 tccccgaccc tgcccgtgca gtgtttattt ttatccactc tcaataggag aaacgaaatg
     2221 acagaagaag acaaagaata tcttcaaact aaaattgaaa acgaaggttt tgaatacgct
     2281 ttcgtcagtt atagtgactt tgaagaagtc caagatgaaa aattccacgg gcttcgcaag
     2341 gcttatttaa aagctcgaag tgagttagcg gaatatattg atattgaaga ttaaccactg
     2401 atgaactgtt cattgaacaa atgaacactt gacaaccaac cgcttgtagc taactgcaag
     2461 cggttaattt ttggaggaaa aatgcacata gaagacaaaa tcgcttggtg gcttgccaat
     2521 ggagagacag gggtaagcag taaaacaatg gctttttacc ttggttacgg aataagacca
     2581 aaaatagaag gctacccaca cgatgtatcg gatttcaggc gttgctttct gttgttggag
     2641 acagtccctt ttttgcgaaa taggattgaa aaaatggctg aacttgggaa agtttgggct
     2701 gcacttgcaa aagaatggca cacattagag gctctctaca acgaagagga agatcaaata
     2761 agatgcccca aaacctatgc taagttgaga gaaatcctag aagccaacga agaaaatgtt
     2821 gtccgcatcg gtaatgtgag catttcgata ggttcaacga cttaacgatt atttaaccaa
     2881 atccctctaa atgaggggtt tatttggaga gaatatgaac atctacactg acttcctttc
     2941 tcgtgaagag attgaattta ttactcaatg caagcagaaa aatctaatca aaaaacaact
     3001 caacattatg ggcattccat ttaaagaaaa tgcaaatgga ttccctgttg tccgccgtga
     3061 ttatgctcag gctaaacagc gtaaacctat tgcaacgaat gattctgact gggtatcaaa
     3121 tgcatttaaa gcgtaaattg agaagaagga ggcacttatg gcacgccctc gaaaatatga
     3181 aaacaacgga ttgccacaaa acctactctg ccgccgcaga aaacgagcaa acggaagtat
     3241 agttgaatac tacttttacg ttcttgccga cggcaaagaa aggtctctcg gtacaaacaa
     3301 acacgaagca attttagaag cagccaagct aaattttgaa aatagtagaa aatccccaat
     3361 tgttttattt attgatgtgg caaaacgcta tgaattggaa gttgttccaa ccaaaaaagc
     3421 caaaaacact cgtcaatcta atttacaggc tattcattgg ctatgtaaat tctttggtaa
     3481 cccacctgca ccgctcgaaa aaattgagcc aaagcacatc agtcaatatt tacaatggag
     3541 aaaagacacg ccggctgttg ctaatattga ggtaggttta tttaacacaa tttggaatat
     3601 ggcaagagaa tggggataca ctgctcttcc aagcccatca caaggtgtaa aaaaattccc
     3661 gaccaaatat cgtgaagttt atgtagagga ttatatcctt gataaaatct atgaatttgc
     3721 agatgaaaga atggcggata ttatcgaaac agcctatttg ctgggacaaa gaccgattga
     3781 tatttgtaat atacaccgct cacacatcta tgacggtata ttgcatatta ctcaacagaa
     3841 gacagggaaa aaagtgagat ttgaaattag tggtcggcta aaagaaattt tagataaaag
     3901 gttgggatac gaatcagact ggatttttac caataaatgg gggaaaaaat taaaacggcg
     3961 aagtttaggc gatcatttta aagaaataag ggagagagca atgaaagcat atcctgaact
     4021 tgctgatgaa atcgctaaag tacaaatgcg tgatatgcgt gccaaagcag ccaccgatat
     4081 ttccctaatg acaaccgatg aacaagctca aaaacaactt gggcatacat caaaaagaat
     4141 gacacatcat tacatcagaa aagacaaaat cctcaaacct accgatgaaa tcacctaaaa
     4201 ataaagccct tttgccaaat acaaaagagc catttactca cctaaaatcc gttccgaaac
     4261 tattttgtaa ataattgatt ttattgacct aaaaaactat aaaatcgcaa aaagtttcgg
     4321 aacagaaaac agcgttaaac ccttgtaaat caaggattaa gcacgtttga agtctaagtg
     4381 aactaatttt ggtttagttg ggtggcgttg aattgcttgt acttttactt gctcttcttt
     4441 acctgcaaca acgatagtta atacttcgtt atagaatgaa tcgtgaactt gtgcgttgtt
     4501 cactttatcg tgatctaaaa tgattgatac aggctctgca ttaccaccgt agatgattgc
     4561 aggaacttga ccattgtgac gcaggcggcg gctcgcaccc ttaccttgcg cagaacgaac
     4621 ttcagcttca aatttgaatg acatagtttt attctcttaa ataaaatggg gaaatccccg
     4681 tgaatagaaa aaacagcagg cgacccagct gtttccgaaa aaatatcggc atatccgtct
     4741 cgatatgcca actacgtatt ttactgaagt tgcagaaaaa tgcaatgtaa aaatattaag
     4801 caaccagttt tttcaactgc tctgcataag cttcccaatc tgtaattggt cgagttgcta
     4861 cacctgattg aattgctgct tttgctacac caatcgagac attcacgatc aaacgtggat
     4921 caaatggcgt tggaataata tattccgggc caaacgataa ttcgccataa gttgaaataa
     4981 cttcaaacgg cacaggttct ttagccaact ctgcaatcgc atgggctgct gccattttca
     5041 tttcttcatt aatggttttt gccccaacat ctaatgctcc acggaataag aacgggaaac
     5101 aaagcacatt attcacttgg tttttaaagt ctgaacgacc ggtacataca atcgcatctg
     5161 gacggacagc cttcgcttca gcaggtgtaa tttccggcac agggttcgct aaagcaagaa
     5221 ttaatagatc ttttgccatt gttttaacca tttcttgcgt taaagctccg ccttttgaac
     5281 aacctaagaa aacatctgca ttcgcaacgg catctgccaa tgttctccaa ccattatctt
     5341 ctattgcata gaattgtttg gtttcatcca tcttatcacc acgaccttgg aaaataacgc
     5401 ccttagaatc gcacattgtg atattttctt ttttcacacc taatgaacgg agtaagttag
     5461 tacacgcaat cgctgatgct ccagcaccgt ttaccactaa acgtacttct gaaattgctt
     5521 tacctaccac ttgtaatccg ttaatcaccg ccgcaccggt aataattgcc gtaccgtgtt
     5581 gatcatcgtg gaacacaggg attcccatac gttcacgtaa tttttgctct acataaaaac
     5641 attcaggtgc tttaatatct tccagattaa taccaccaaa agtcggttct aacgatgcaa
     5701 taatctccac taatttctcc ggatcagttt cattaatttc aatatcaaac acatcaattc
     5761 cggcaaattt cttaaataga acacctttgc cttccatcac aggcttactt gctaaagcac
     5821 caatattgcc taagcctaac actgctgtac cattagaaat tactgcaact aagttacctc
     5881 gtgccgtata acgataagaa gctgaaggat ctttttcaat cgctaagcaa ggctcagcaa
     5941 ccccaggaga gtacgctaaa gctaaatcgt gctgagtatc taatgcttta gtaggagtaa
     6001 cggaaatttt tccggggatt gggaactcgt gaaaatcaag cgcctgttgt tttaaatcgc
     6061 tcattttaga aaccttataa tctataaaaa taaaagtaat caataatagc caaagagtag
     6121 ccattttacc ctaaattttt tcgcattttt atggctttgc tctcattttt tatgatattt
     6181 acaaaaaata atacaaaaac gtccgcttgt tttactcaaa tcaagcattc ttcatcttat
     6241 tgataaaata agaaaccatt tcagaagcta tatcaacatc atttactctc tctatgcctt
     6301 caaatcctgg gctggcattg acttctaaaa taactacgcc tttctctgtc cgcagaaaat
     6361 caacgcctgc aatatcaagc cctatcgttt tagttgcttt aattgctaac gcacgttcca
     6421 tctgagttaa ttcaatcggt tgagccgttc caccttgatg aatattggct ctaaaatcgc
     6481 ctgttacgct ggttcggctc atggcagcaa ccacttcatt gccaatcaca aacgcccgaa
     6541 tatcttgccc tttagcgtcg cccacaaatt gttggcatag ataaggctca tttacttgcc
     6601 taaaggtcgc taacacggcc tcggcattat ttttgccttc aaatagcatt acgccattcc
     6661 cctgtgaacc atttagcact tttgaaataa gtggaaaagc aaattgattg agttgtgatt
     6721 tcacagaaac caaatgccct gcaaaattcg tattaggaac cggcaaattg tgtttggcta
     6781 atttttgtaa tgttcgccat ttgtctcggg ctaacgcaaa tgccgctgaa tgatttagaa
     6841 caggaatacc tttcgcctca aaatggcgta acaccgaaca gcccatttcg gtactgcctg
     6901 tgccaaaacg gggtaaaatg ccgtcataat tcggcaacaa taccggctcc ggacggttgt
     6961 tatcatagct ctcgccagct tgatagtaga tcttaaattc gccattttct aacccgagta
     7021 gcattctatt ctggtctaaa atatccagct caatcccctt tgcctcacaa gcggctttta
     7081 ttcgacagca gctatataaa cgaggctctc gacatagcat tagccacttc attttttcag
     7141 caatcctttc tgattgaaaa acggcaaaat atgcggacga acaggcttat ccaatgtttt
     7201 atgaatagct gcttgccatt gttgtggctc gccgattctg gcttggtagt aagcggtcaa
     7261 attttcatta tattttgcaa attcagtcca atcaaaatcc tgatattgat tgttataaca
     7321 aaccaaacta ttcggcaaac gaggttttat tgccggctct tgtgccggat accccaaaca
     7381 catacccacc agtggaacac aatattccgg caagttaagg gctttagaaa cccgctcaat
     7441 atcattacgc aatgctccaa tatacaccgc tcccagccct agtgattcgg cggctaaaaa
     7501 tacattctgg gccaaaatac cggtatctac cgccccaatc aacgacacct ccgcccattc
     7561 caactgcgat tcagggacaa gttgtttgtg tttattaaaa tcaatgcaga acaccaaaaa
     7621 ttcagcacaa tctactacat attgcatacc tgaaacggct tttaatgttt ctcgaatctg
     7681 ccgatcggtt acacgaatca ccgtcacaca ttgcagatga tttgaacttg aagccgcttt
     7741 acctgcctca attaagattt ggaaaatctc ttcagaaata ggctgttcgg taaatttacg
     7801 aatagaacgg tgagataaaa tcgtctcaag agtcggttta ctttgcatat ttttctcgtc
     7861 taaagtttat ctaaataatt tttgccatca agcaaactta cttgtcgcat aatccacgct
     7921 tggcgttttc gcatactcgg gccgggttta tctaccctaa acaccaacgg gttaggcaaa
     7981 gaggctgcca atagtgcgga ttcttgcaag gttagctgtt tggctgattt tttgaaaaaa
     8041 tgctttgcgg ctgcttccac cccgaaaatg ccgttaccaa attccgcaat attgaggtac
     8101 acctctaaaa tccgatcctt actccacaca ttttcgacta acagggttaa aggcacttca
     8161 atccctttgc gtaaccagct ttgcccgtgc cacaaaaaca tattttttac cgtttgttgc
     8221 gaaatggttg aacctccacg cacttttttg gatttagcat tcagtttcaa ggcagtttct
     8281 atcgcttgta agtcaatgcc aaaatggctt tcaaactttt gatcttctga ggcaatcaca
     8341 gccatttgca tttgccacga aatctcattc aggctcaccc attctttttt gatcgggtaa
     8401 gatttcccct gaaccagatt ctccaccttt ttttgcacca tatacgcaga ataaggcacc
     8461 ggtaacaccg aaaaaatcag tatcggaatc aggaaaaatg tgccaccaaa ggttaataag
     8521 cgactagaac caaaccaaag ccagcccagt ttacttttta ttttgcgagg aataaaaaaa
     8581 agccctattt tcttcaaaag agagcttaaa aatcgcttgt tacgctttgc cattgactgt
     8641 tccattaacc ttgccgttca gccattgcag aaaatcttgg tcgagtgttt taagcatatt
     8701 tgaaccacga gtgatggttg ccgcactggt atttaaattt tgttggattt cccgttgcga
     8761 atcttcacct tttagcaaag cttgcacaat ttgtaaacgc aagcctaatg aacctcgctc
     8821 atcggcggtg agaaacattg agaaaaacgg ctcaagttta tcttccgcaa ccgcttgttc
     8881 aagcagagcc aaaaactgcg tccactcgtt tggatctcgc tggttataga gtgttttcat
     8941 actgtccctt gaagtaaaaa cggtgacaag cggtcagatt tttacaaaat tttgcagaaa
     9001 aacgaccgct tgctctccat tattttttcg attttttacc gccacgttgg tcgtctaact
     9061 ctgccccttt cggtacgctg aatttaaaca aatcgcttga gacaccgccg gtagtaatat
     9121 tgcgtaacac atataagtta ctttgcccgt cacgctcaat ggtactgaaa ccttttaata
     9181 aaccgctttg gtcaatccgc acatcaaact gttttaaatt gctttttttc gattttggct
     9241 taagcacgaa agtatcagca ctctggctga catcatattg atcccagtgg cttttatcac
     9301 cgctggttaa taagacgaat ggcgtattat taactgcatc ttgcacggta tttaccgtaa
     9361 cttgtgaaac gaaaggatcg taaaaccata aatctttgcc gtcagataca atcaaatttt
     9421 cttgtggtga tttggtatcc attctaaata agttcgggcg ttttacttgg aatttgcctt
     9481 tgccttgctg aatttgttta cctttgctag aacgcacggt ttggtcgaaa tccgcactat
     9541 attggcttac ttgttccaaa cggcgttgta attctgcaac agattgagca tcagccaatg
     9601 ccacatttgc caagccaaat aacgctaaac cgaataccga ttttttaaat aatgttttca
     9661 tttgttttcc tttttaccaa caagaatttt cttgtttgac aataaaatca tcaaaagttt
     9721 catattaatg aactgttaca acaatacaat aaaagtcgtg aattgtatag tttaatgagc
     9781 ttcgtcccag ttttcgccta cgccaacttc ggcaatcagt ggcactttga ggctaatcgc
     9841 tttttccatt tcggttttga ttaattggct gtaatggtcg attttatcgg ctttgacttc
     9901 aaacaccaat tcatcgtgaa cctgcataat cattttgatt tcatcattat cacgaatcgc
     9961 attatcaata ccaatcatcg ccaccttaat aatatcggca gccgtgcctt gcattggggc
    10021 gttgattgcc acccgttctg ctgctttacg caaaatagca ttgccggatt taatatcagg
    10081 caagtacaaa cggcgaccaa atagggtttc aacatagcct ttttcaactg caacttcacg
    10141 aatatcggtc ataaattgtt gaaccgccgg gtaacgttgg aagtagagat ccatatattt
    10201 ttgagcctct gcacgcccaa tccctaattg gtttgaaagc ccaaatgacg acattccgta
    10261 aatcagcccg aagttaattg ctttcgcact gcggcgttgt tcggaggtga cttcacctaa
    10321 ctccaccccg aaaatttcgg cagcggtagc acggtgaata tctttgccct ccgcaaaggc
    10381 gttaatcatt ccctcatcat tcgataaatg agccataatc cgtagctcaa tttgtgaata
    10441 gtcggcagcg acaattttat aaccttctct cgcgacaaaa gcttggcgaa tccgtctgcc
    10501 ctcttcattg cggatcggaa tgttctgcaa attcggatcg ctggaagaaa ggcgtccggt
    10561 tgcggtgact gcttgattgt aagaggtatg cacccgccct gtttttttgt taatcagttg
    10621 tggtaattta tcggtgtagg tagatttcaa cttacttaac ccacgatgct ccattaataa
    10681 cttcggcact aaatgccctt gttgagccaa ctcgtctaac acttcttcgt tggttgaggg
    10741 tgcacctttt ggagttttct tcaacaccgg caagcctaat ttttcaaaca aaatctcttg
    10801 taattgttta gttgaggcaa gattgaaggt ttgccctgct tctgcgtgta ctaatgtttc
    10861 aacttcctcc aaacgttttt caatttcagc cgattgggtc aataattttt tcgggtcaat
    10921 caacacgcca ttgcgttcaa ttcgagaaag tacgcccaca agtggcattt caatttcatc
    10981 gaataacttc accaattcag gctcttgctg tagtttttcc cacaatactt ggtggagttt
    11041 catcgtcaca tcggcatctt ctgccgcata ttcagccgct tttgctatct cgattttatc
    11101 gaaggtcagt tgatttttcc ccttaccagc aagctcttca aacggaatcg ttttatgccc
    11161 caaataacgg gcggctaaat cgtccatatt atgacgaccg gtgctgtttt gggtgtaaga
    11221 ttcaatcatc gtatcaaaag caacaccttg tagctcaatg ccgtagttcg caaaaatggt
    11281 taaatcatat ttaatattct gcccgatctt tttaatctcc gggttaagca aaatcggctt
    11341 gagtttactt aaacaagcgg tcaaatttag ctgatttttt accaattcat cggaagacgg
    11401 gctttctgaa cgctcctcat caccgaacat atcggcttgt tgcggttggg ctttttgctt
    11461 atgcccaagc ggaatatagc acgcctcgcc attttccagt gcaaaggaaa taccgaccaa
    11521 attagccgac attgcgtcaa ggctgtcggt ttcggtatcc accgcaatca aacgagctgc
    11581 ggtgagtttt tcgatccagg ctgataattt ctgttcagta tcaacggtct catatttgct
    11641 acgatcgatc tcgaccacat ttgcaacatt ttcctcattt ctgaccgctt gtgttacttg
    11701 gtaattattc ggtacttttt cagccgaagt ttgagtgacc ggattggcat tttgattcac
    11761 ttcgttcagc cagcgtttaa attcataatg ctcaaataat tgagcaagct cagcacggtc
    11821 ttgcggctgt gttaaaagtt gatcgtgagt aacatcaagt tccacatcgg ttttgatggt
    11881 agcaagcaaa taggataaat cggcattcgc tttttccgct tccaattttg gggcgaaatt
    11941 ttttgcccca cggaaagaaa gggtggcaat ttgatccaaa ttagcataaa tctgttcaag
    12001 tgaaccaatg ccttgcaata aagctaatgc ggtcttttcc cccacacctt ttacgcccgg
    12061 aatgttatcg gcggaatcgc ccattaatgc cagaaagtcg ataatcaact caggcggaat
    12121 gccatatttt tcaatcacgc cttcacgatc taacaaagta ttgttcatcg tgttaatcaa
    12181 cataatgtga tcgttcacca attgtgccat atctttatcg ccggtgctga tcaacacatc
    12241 tttgccgtct ttagcggctt gcacagcaag cgtgccgatc acatcatcag cttccacacc
    12301 ttcaatcgaa atcagtggaa tgcctaaggc tttgataatg cgatgcaaag gctcaatttg
    12361 agggcgtaaa tcatcgggca ttggtgggcg gtgcgattta tattgcttaa acaactcatc
    12421 acggaaggtt ttccctttgg catcaaacac cacagcaata tggcttggat tcacttgtga
    12481 aatcaggctt tttaacatat tcagcacgcc atacattgcc cctgtcggtt cgcctaagcg
    12541 attagtgagc ggagggaaag cgtgaaatgc tcgatataaa taggaagaac catccaccaa
    12601 taccagtgga ttttttgcga tagttgccat aaaaatctct ttataatcaa ataaatattg
    12661 g
//
LOCUS       DANMCL010000084        12126 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.084, whole genome shotgun sequence.
ACCESSION   DANMCL010000084 DANMCL010000000
VERSION     DANMCL010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12126
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.084"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1077)
                     /locus_tag="PXF40_002119"
     CDS             complement(<1..1077)
                     /locus_tag="PXF40_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5803419.1"
                     /translation="MDKRSRWSCLVNEQGEISEWEDKAGADYFAELPQICHYAQALLY
                     SDKNSLQFYYSSNHQWLKISLERHQSFVLTQAEHTDLPYGLSKREIELLTLISSGLSN
                     EDIANELCISKRTVDKHIENIFAKTHTKSRTLLAVFAITEHLICLPTPGKLTQSILAS
                     FNIEQLALQIIAKKQPLVTASTRHEPPIFTINHHHSRPIIIGVPYVEQGIGQIDTREL
                     LNGTQLAVETINQQGGIHGREVQVATAGFYVKDKASILQAYHHLFDQEVDAISTAYAC
                     YLPEVHELIATKGIPYLHIATHSGSNKLAQNLPNQRIENMFQVCASDVTYGLGISHFL
                     QYYRYHYAPWLQNKTVMVVTVSWQK"
     regulatory      1241..1397
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            1386..2411
                     /gene="moaA"
                     /locus_tag="PXF40_002120"
     CDS             1386..2411
                     /gene="moaA"
                     /locus_tag="PXF40_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005607581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HDL5803420.1"
                     /translation="MQSIIPIKNVGDDVVSGLVDRFQRQYTYLRLSITDVCNFRCNYC
                     LPDGYKPPSHKQTFLSVDEIQRVAKAFANLGTEKIRITGGEPTLRKDFLEIAHTISQT
                     PGIRKVALTTNGYRLERDVELWQQAGITDINVSVDSLDPRQFQLITGENKLQSILKGI
                     DKAFEIGYPKIKVNAVLMKQYTAPELDKFLTWIKDKPIQMRFIELMETGEMDSFFQAQ
                     HLSGQSVMTRLLQEGWQLQPKAMSDGPAKVLSHPDFKGEIGLIMPYEKNFCASCNRLR
                     VSALGKLHLCLFGEEGIDIRDLLASDEQQLQLETRLKSSLQGKREHHYLHIGDSGVRN
                     NLASIGG"
     gene            2912..3388
                     /gene="moaC"
                     /locus_tag="PXF40_002121"
     CDS             2912..3388
                     /gene="moaC"
                     /locus_tag="PXF40_002121"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HDL5803421.1"
                     /translation="MTTFTHINQNGEANMVDVSMKQETVRIARAEAFVRMNAETLQMI
                     VSGNHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVQLEALPESNQVRIESL
                     CKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMIIENVRLLSKSGGKSGDFKVD"
     gene            3381..3626
                     /gene="moaD"
                     /locus_tag="PXF40_002122"
     CDS             3381..3626
                     /gene="moaD"
                     /locus_tag="PXF40_002122"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005631889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HDL5803422.1"
                     /translation="MIKILFFAQVRELVATDRLDVEPTFTTAEALREHLSQQGKKWQL
                     ALEKGKLLVAINQTICPLETEIKDGDEVAFFPPVTGG"
     gene            3628..4083
                     /gene="moaE"
                     /locus_tag="PXF40_002123"
     CDS             3628..4083
                     /gene="moaE"
                     /locus_tag="PXF40_002123"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HDL5803423.1"
                     /translation="MFETLIEVQEAEFDQNRIYQWLSEQHSVGAATLFIGKVREMNLG
                     DNVSGLFLEHYPAMTKKALQEIVAQARTRWDLQRVAVIHRIGQLHTGDEIVLVGVSSA
                     HRGDAYHANEFIMDYLKTKAPFWKREQTQAGERWIEGRESDQQAAKKWQ"
     gene            4116..4598
                     /gene="ybeY"
                     /locus_tag="PXF40_002124"
     CDS             4116..4598
                     /gene="ybeY"
                     /locus_tag="PXF40_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HDL5803424.1"
                     /translation="MENLYIDLQIACENTENLPSEQQFYTWVQKALAVEAKTDDFPES
                     EITIRIVDEAESHELNLTYRGKDKPTNVLSFPFEAPEGIEMPLLGDLVICRQVMEKEA
                     EEQGISAESHWAHLAIHGTLHLLGYDHIEEDEAVEMESLETEIMQSLGYEDPYLSEKI
                     "
     gene            4676..6694
                     /locus_tag="PXF40_002125"
     CDS             4676..6694
                     /locus_tag="PXF40_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HDL5803425.1"
                     /translation="MRTIAIITSPNNADFIQQGYFYIPENHQLKAIPFSNAKTILGQE
                     YPFAIYTMQAENGVNFNLDAFAILAGTIQENGTLFLLCPQWDNLENELDFDALRWNEN
                     QAIACPNFYQHFKQLVAKFGFEVRTNLPKLPATSGQIPSKIYQLTQEQQNILQNLPLD
                     PADIHLITAPRGRGKSTLAGRLAKALPAQNKVLITARSYSALPSFWRSAEQKIPFFAP
                     DNLIEQVKSKNISPNQWLFIDEAASLPLPILHTLCAYFEKVVLTTTTQNYEGTGRGFE
                     LKFPVMLDKPFKHWTLSQPLRWSENDPLEAFVTELLLLSEEKSPLFSKEGKGEIYSLR
                     SHYVPLLKQRSNAKRLWQKQLSKNISYSNKHLQEKIAFYHLLANAHYKTTPTDLRRLF
                     DGENQLLFSQQENEQLIGGIWAMQEGGLDEKLTQAIWLGERRPQGSLVAQYLCFQGNL
                     PQACKLHSIRISRIAVLPEKQNQGVGKRLISQFILQNSVEKRPLDFISVSFGLTTPLH
                     AFWQSCGFQLVQITPNKEASSGYQSAMMIYPISEQGKLFAQQATQAFARDFALQPFFT
                     EICEELQNFEQFRPLATHNLDERDWKNLTAFAHGKRTFSAAYVSLKRLYLSDKARFSE
                     LDIFERKGQKISKMEVENYRKLVLQNLNNKSFKIIYRFYYIFLCFCSC"
     gene            6759..7949
                     /locus_tag="PXF40_002126"
     CDS             6759..7949
                     /locus_tag="PXF40_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000462687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HDL5803426.1"
                     /translation="MFSHIQAAPADSILGLGEAFKADSREGKINLGIGVYMTDEGKTP
                     IVKAVKEAEKRLLETENSKNYLTIDGVQAFNAATQALLFGEGAEVITSGRAKTAQSLG
                     GTGALRIAAEFIKRHTNAKNVWISTPTWPNHNGIFDAVGVNVKGYRYYNKETNGLDWE
                     NLIADLSQAEAGDVVLLHGCCHNPTGIDPTPAQWEQLAALSAEKGWLPLFDFAYQGFA
                     NGLEEDAYGLRAFVKNNRELLVASSFSKNFGLYNERVGAFTLIADNADDANRAFTQIK
                     SIIRVLYSNPSAHGASAVAVALADPDLKAQWIAELDEMRNRIKEMRSQLVQKLKEKGA
                     NKDFSFITEQNGMFSFSGLTPEQVDKLKDEFAIYAVRSGRINVAGITSKNIDALADAI
                     VKVL"
     gene            complement(8056..9357)
                     /gene="folC"
                     /locus_tag="PXF40_002127"
     CDS             complement(8056..9357)
                     /gene="folC"
                     /locus_tag="PXF40_002127"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HDL5803427.1"
                     /translation="MNTLSIPKATDSLETWLSYLEQAHSKPIDMGLDRIRKVATELDL
                     LKPAPYVITVAGTNGKGSTCRLLEVTLLKAGFRVGVYSSPHLIHYNERVRINGEVLPD
                     ADHVQAFAKINAKKTASLTYFEFSTLSAFELFKQNQLDIVILEVGLGGRLDATNIIDP
                     SLAVIISIDIDHVAFLGDNREDIGREKAGIFRENIPVVIGEPDCPHSIKQIADSLNCH
                     AFYRGKDWQFEIKNNLFHWYSEEKSFTDLPIPLIPIPNAGTALAVLMQLPFEIDEKII
                     RQALNEAQMTGRFQTLTDTDFTHFSQPKPAAKVIIDVGHNPHAARYLADKLRELKQPN
                     QKIYAVFSALEDKDLSGIVEPLANIIDEWHCAGLDCWRGQTGEAVLAKLVNVLPNSTA
                     CSYENVAQASRVLFETANENDIVLVFGSFHTVADFMLWLET"
     gene            complement(9367..10263)
                     /gene="accD"
                     /locus_tag="PXF40_002128"
     CDS             complement(9367..10263)
                     /gene="accD"
                     /locus_tag="PXF40_002128"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HDL5803428.1"
                     /translation="MSWLDRILGRDSSSSSNAKSKVPEGVWTKCTSCEQVLYSEELQR
                     NQQVCPKCDHHMRIDARTRLLNLLDKDSAVEIAADLEPEDVLKFKDLKKYKDRLTAAQ
                     KQTGEKDSFIVLAGTLHNMPVVTASFNFEFMGGSMGSVVGAKFVKAAEKALAEKIPFI
                     CFSASGGARMQEALFSLMQMAKTSAILAKMKEQGVPFISVLTDPTLGGVSASLAMLGD
                     VNIAEPKALIGFAGPRVIEQTVREKLPEGFQRAEFLLEHGAVDMIVHRKEMRDTLSRL
                     CAKLTNQPTPFKVAELVVENAE"
     gene            10572..11357
                     /gene="mazG"
                     /locus_tag="PXF40_002129"
                     /pseudo
     CDS             10572..11357
                     /gene="mazG"
                     /locus_tag="PXF40_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525312.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
     gene            11425..>12126
                     /locus_tag="PXF40_002130"
     CDS             11425..>12126
                     /locus_tag="PXF40_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HDL5803429.1"
                     /translation="MSKILLIDDDIEFTELLTELLSLEGFKMKVVHNGLEGLNELESN
                     QYDLVLLDVMMPVLSGVKTLKRIRQKYSLPVLMLSARDDQIDRILGLELGADDYVPKP
                     FNNRELVARMKAILRRTTSRPASTDHSEQNYTENISKSLQFAGVELHSGRQQAYYQGC
                     DLDLTGTEFALLQMLMRNSGEILSRELLSLKILGKNLTPYDRAIDMHISNLRKKLPER
                     EDGLPWFKTLRGRGYL"
BASE COUNT         3711 a         2431 c         2510 g         3474 t
ORIGIN      
        1 tttttgccaa ctcaccgtta ccaccatcac cgttttattc tgaagccaag gggcataatg
       61 gtaacggtaa tattgcagaa agtgagatat acctaagcca taggttacat cactggcgca
      121 aacctgaaac atattttcaa ttcgttgatt cggtaaattt tgggcaagtt tatttgagcc
      181 actatgggtt gcaatatgca aataaggaat gcctttagtt gcaattaatt cgtgtacttc
      241 cggcaagtag caggcataag cggtggaaat cgcatcaact tcttgatcaa ataaatgatg
      301 gtatgcctga agaatacttg ctttatcttt aacataaaac ccagccgttg caacctgtac
      361 ttctctgccg tgaataccac cttgttgatt gatggtctca accgcaagtt gagtgccgtt
      421 aagtagctct cgggtatcga tttgcccaat accctgttca acataaggca cgccaataat
      481 aatcggacga ctatgatggt ggtttatcgt aaaaatcggt ggttcgtgtc gagttgaagc
      541 cgttacaagc ggttgttttt tcgcgataat ttgcaatgcc agttgttcaa tgttaaagct
      601 ggcaagaatg gattgggtta gttttcccgg tgtgggtaaa cagattaaat gttcggtaat
      661 ggcaaaaaca gctaataagg ttcggctttt ggtatgtgtt ttcgcaaaaa tattttcgat
      721 atgtttatca acagtccgtt tgctgataca aagctcattg gcgatatcct cattgctcaa
      781 accactgcta attagagtga gaagctcaat ctccctttta ctcagtccat aaggcaaatc
      841 ggtatgctct gcttgagtca atacaaacga ttggtggcgt tctaggctga tcttaagcca
      901 ttgatggttt gaactatagt aaaactgcaa gctattttta tctgaataga gcaatgcctg
      961 tgcatagtgg caaatttgcg gtaattcagc aaaatagtct gcccctgctt tgtcttccca
     1021 ttctgatatt tcgccttgtt catttactaa acaagaccat cggctacgtt tatccattct
     1081 cacctcgaac taaaaacgtt agctaaaata gcaaaattat ctcggcatta atatgatata
     1141 aatcaaacta agcaacggtt gccagatttt tataggtaga gcatacaatt taaattatac
     1201 ctcttgccta attaggtttc tcaccataaa atgaaaacca atttattgaa gactccgagc
     1261 attatttcct aactctaaaa attaaagaca aatttttgat atggaattta tgccagtaac
     1321 agcataaagc tgttcaaagg ataacttaga aatgggttgt cctctcgtgt ttagaaaggt
     1381 gtcaaatgca gtctattatc ccaattaaaa acgtgggtga tgatgtcgtt tcaggtttag
     1441 ttgatcgctt tcagcgtcaa tatacttatt tgcgactatc cattactgat gtttgtaact
     1501 tccgttgtaa ttattgcttg cctgatggct ataagccgcc ttcacataag caaacttttc
     1561 ttagcgttga tgaaatccag cgggtggcta aagcctttgc caatttaggg acggaaaaaa
     1621 tccgtatcac cggtggtgag ccaactttac gcaaagattt cctcgaaatc gctcacacta
     1681 tttcacaaac acccggtatc cgtaaagttg ccctaaccac caacggctat cgcctagagc
     1741 gtgatgttga actgtggcaa caagccggta ttaccgatat taatgtgagt gttgatagcc
     1801 ttgacccacg ccaatttcaa ctgattaccg gcgagaacaa gttgcaatct attttaaagg
     1861 gtattgataa agcctttgaa attggctacc caaaaattaa agtcaatgcg gtgctaatga
     1921 agcaatatac cgcccctgaa ttggataaat tcctcacttg gatcaaagac aagccgattc
     1981 aaatgcggtt tattgagctg atggaaaccg gtgaaatgga tagtttcttc caagctcaac
     2041 atctttctgg tcaatcggtg atgacccgct tattacaaga aggctggcaa ttacaaccca
     2101 aagcgatgtc tgacggcccg gcaaaagtgc tttctcaccc tgattttaaa ggcgaaatcg
     2161 gcttaattat gccctacgag aaaaatttct gtgcctcttg caaccgcttg cgtgtttccg
     2221 cacttggtaa actgcatctt tgcttatttg gtgaagaagg gattgatatt cgtgatttac
     2281 tggcaagcga tgagcaacag ttacagcttg aaacccgcct aaaatcttcc ttacaaggca
     2341 agcgagaaca ccactatttg catattgggg atagtggggt taggaataat ttggcgagta
     2401 tcggtggtta aacaaccacc gagcgtgttt tttctgttac ttttctttgc ttcgccaaag
     2461 aaaagtaacc aaaagaaagg cgaccccaga ttttccttaa tccttcgctt gttgctaact
     2521 tttgggacga acttttcaaa ctcgccaact gcgttggctc aaacacgaaa agttgtcctc
     2581 aaaagtttac gcaatcgcta cggcggaaaa taggggcaag cggtacatta tttaagattt
     2641 ttgcaagttt ttatttaaaa ataaccgctt gtaatgttcc agcttctccc ttctgaaccg
     2701 cctgagcgac tttgaattta taggaaaaat ttagtgtttg agccaacgaa gttggcgagt
     2761 tttaaatttt tccgttaaac aaattcaaat aaaatgaaga tagcggtgaa gtagggtgtg
     2821 ctttctttgg ttactttctt tgcacaagca aagaaagtaa caagaagacg ctcaatatta
     2881 attttacaat caaatttaaa gagacaaaca aatgacaacc ttcacccaca tcaaccaaaa
     2941 cggcgaagcc aatatggttg atgtttcaat gaaacaagaa accgtacgca ttgcccgagc
     3001 ggaggcattt gtgcgaatga atgccgaaac attacaaatg atcgtcagtg gtaatcacca
     3061 caaaggcgat gtattcgcaa ccgctcgaat tgccggtatt caggcggcga agagaacttg
     3121 ggagctgatt ccactctgcc acccgttatt gctttctaaa gtggaagttc aactggaggc
     3181 gttgccggaa agcaaccaag tgcgaattga atcactctgt aaactaaccg gcaaaaccgg
     3241 cgtggaaatg gaggcattaa ccgcagctag tgttgctgct ctgactattt acgatatgtg
     3301 taaagccgtg caaaaagata tgattattga aaatgtaaga ttacttagta aaagtggcgg
     3361 aaaatcagga gatttcaagg ttgattaaga tacttttttt cgcccaagtg cgtgaacttg
     3421 tggcaacgga tagactagat gttgagccta cttttaccac tgccgaagcg ttgcgtgaac
     3481 acttaagcca acagggtaaa aaatggcaac ttgcccttga aaaaggcaaa ctgctggttg
     3541 caattaatca aacgatctgc ccgcttgaaa cggagatcaa agacggcgat gaagtggcat
     3601 tcttcccacc ggtaaccggg ggctaaaatg tttgaaaccc tgattgaagt acaagaagct
     3661 gaatttgacc aaaaccgcat ttaccaatgg ctcagtgaac aacatagcgt gggggcagcc
     3721 actctattca tcggtaaagt acgtgaaatg aatttgggcg ataatgtttc cggtttgttt
     3781 cttgaacact atccggcaat gactaaaaaa gcattgcaag aaattgtggc tcaagctcgc
     3841 actcgttggg atttacaacg cgttgcggtg attcaccgca ttgggcaact gcataccggt
     3901 gatgaaatcg tattagtcgg tgtgagttct gctcatcgag gtgatgccta ccacgccaac
     3961 gagtttatta tggattatct caaaaccaaa gccccatttt ggaaacgaga acaaacccaa
     4021 gccggtgaac gttggattga agggcgtgag agtgaccaac aagccgccaa aaaatggcaa
     4081 tagaaaaaat ggcaataatt tgcaaaaggt aacgaatgga aaatttatat attgatttgc
     4141 agatcgcctg cgaaaatacc gaaaacttac caagtgaaca acaattttat acttgggtac
     4201 aaaaagccct cgcagttgag gcaaaaaccg atgatttccc tgagagtgag atcaccattc
     4261 ggattgtcga tgaagcagaa agccacgagc taaatctgac ttatcgtggt aaagacaagc
     4321 caaccaatgt gctatctttc ccgtttgagg cccccgaagg aatcgaaatg ccactattgg
     4381 gtgatttagt catctgtcgt caagtaatgg aaaaagaggc ggaagaacaa ggtatttcag
     4441 ccgaatccca ttgggctcat ttggcgattc acggcacact tcatctgctc ggctacgacc
     4501 atattgagga agatgaagca gtggaaatgg aaagcctcga aaccgaaatt atgcaaagtt
     4561 tagggtatga agatccgtat ctttcagaaa aaatatagtc ttgtagggga gggtcctgtg
     4621 ccctccagta ctccattata atcggacagg cacaggagct gttcctacaa gttatatgag
     4681 aacgatcgca atcataacat ctcctaacaa tgccgacttt attcaacaag gctattttta
     4741 cattcccgaa aatcatcagc ttaaagctat ccccttttcc aatgccaaaa cgattttagg
     4801 acaagaatac ccttttgcca tttatactat gcaagcagaa aatggggtga attttaactt
     4861 agatgctttt gcaatacttg ccggcactat tcaagaaaac ggtactttat ttttgctttg
     4921 tcctcagtgg gataatttgg aaaatgaatt agatttcgat gcgttacgtt ggaacgaaaa
     4981 tcaggctatt gcctgcccga atttctatca acattttaaa caattagtcg ctaaatttgg
     5041 ttttgaagtc agaactaatt tgccaaaatt accggctaca agcggtcaaa ttccttcaaa
     5101 aatttaccaa ttaacgcaag aacagcaaaa tattttgcaa aatctaccgc ttgatcctgc
     5161 cgatattcat ttgattaccg cccctcgtgg gcggggcaaa tctacccttg cagggcgact
     5221 tgcaaaagcg ttacccgcac aaaataaggt attaattacc gcacggtctt attctgcatt
     5281 gcccagtttt tggcgttcgg cagagcaaaa aatccctttt ttcgcacctg acaatttaat
     5341 cgagcaagtt aaaagtaaaa acatttcacc taaccaatgg ctctttattg atgaggcagc
     5401 tagcctaccc ttgccgatac tccacacact ttgtgcctat tttgaaaaag tggttttaac
     5461 cacaacaacc caaaattacg aaggcacggg gcgaggattt gagctgaaat tcccggtaat
     5521 gttggataaa ccgtttaaac attggacgtt atctcaacca ttgcggtgga gcgaaaatga
     5581 tcctctcgaa gcatttgtga ctgagttgct attactttcc gaagaaaaat ctcccctctt
     5641 tagcaaagag gggaaggggg agatttattc gcttcgctca cactatgtgc cgttgctaaa
     5701 gcaacgttca aacgcaaagc gtttgtggca gaagcaatta tcgaagaata taagttattc
     5761 gaataagcat ttacaggaaa aaatcgcttt ctaccactta ctcgccaacg cccattacaa
     5821 aaccactcca actgacttac gccgtttatt tgatggcgaa aatcagcttt tgttttcaca
     5881 acaggaaaac gagcaactta tcggcggaat ttgggcaatg caagagggtg gtttagatga
     5941 aaaattaacc caagccattt ggctagggga acgccgtccg caaggcagtc tagtggctca
     6001 atatctctgt tttcaaggga atttaccgca ggcttgcaaa ttgcattcca ttcgcatttc
     6061 tcggattgcg gtattgcctg aaaagcaaaa tcaaggcgtt ggcaagcggt tgatttctca
     6121 gtttattttg caaaattcgg tagaaaaacg accgcttgat tttatctctg tgagctttgg
     6181 gctaactact ccactccacg cattttggca atcttgtggt ttccaacttg tgcaaatcac
     6241 accgaataaa gaggcaagca gtggttatca aagtgcaatg atgatttacc cgatttcgga
     6301 gcaaggaaag ttatttgcac agcaggcaac ccaagccttt gccagagatt tcgcccttca
     6361 gccatttttc acggaaattt gtgaggaatt gcaaaatttc gaacaatttc gaccgcttgc
     6421 cacacacaat ttagatgaac gtgattggaa aaatttaacc gcgtttgctc atggcaagcg
     6481 gacgttttca gcggcgtatg tgagtttaaa acggctttat ttatcggata aagcacgctt
     6541 ttcagagctg gatatttttg aacgaaaagg gcaaaaaatc tccaaaatgg aggtggaaaa
     6601 ttatcgaaaa ctcgttttgc aaaacttaaa caataaatca tttaaaataa tttataggtt
     6661 ttattacatt tttttgtgtt tttgctcttg ctaaatctgc aatttaatcg tataaattca
     6721 ctgtttattt ttcattttga tgaggaactc caatgtcaat gtttagtcac attcaagctg
     6781 ctccggcaga ctcaatttta ggcttaggtg aagcgtttaa agcagatagc cgtgaaggta
     6841 aaatcaacct tggtatcggt gtttatatga ccgatgaagg caaaaccccg attgtcaaag
     6901 cggtaaaaga agcagaaaaa cgtttattag agacggaaaa cagtaaaaat tatttaacca
     6961 ttgacggtgt tcaagcattc aatgcggcaa cgcaagcgtt attatttggc gaaggggctg
     7021 aagtgattac ctcaggtcgt gctaaaactg cacagagttt aggtgggaca ggggcattac
     7081 gcattgcggc ggaatttatc aaacgtcata cgaatgcgaa aaatgtatgg atttcaaccc
     7141 cgacttggcc aaaccataac ggcatttttg atgcagtagg cgtgaatgta aaaggctatc
     7201 gctactacaa taaagagact aacggtttag attgggaaaa tttaattgcc gatttaagcc
     7261 aagcggaagc cggagatgtg gtgttattgc acggttgctg ccacaacccg accggaattg
     7321 acccaacacc tgcacaatgg gaacagttag cagcattatc tgccgaaaaa ggctggttgc
     7381 cgttatttga ctttgcttat caaggctttg caaacggttt agaggaagat gcttacggtt
     7441 tacgagcttt tgtgaaaaat aaccgtgaat tgttggtcgc aagctcattc tcgaaaaact
     7501 ttgggttata taacgagcgt gtcggtgcat ttaccctaat tgcagataat gctgatgatg
     7561 ccaaccgtgc tttcactcaa atcaaatcga ttattcgtgt actttactct aacccatctg
     7621 ctcacggtgc aagtgcagta gcagttgcat tggctgatcc tgaccttaaa gcacaatgga
     7681 ttgcggaatt agatgaaatg cgtaaccgta ttaaagaaat gcgtagccaa ttagtgcaga
     7741 aattaaaaga aaaaggggca aacaaagact tctctttcat tactgagcaa aatggtatgt
     7801 tctcattcag tggcttaaca ccggagcaag tggataagtt aaaagatgag tttgcaattt
     7861 atgctgtgcg ttcaggcaga atcaatgtag caggcattac cagcaaaaac attgatgctc
     7921 ttgccgatgc gattgtgaaa gtgctttaat taaaccttaa agatatatag aggcataagc
     7981 ctgagtgctt gtgcctcttt tttatctttt aggtacaagt gtggacactt gcaccaacgt
     8041 tgattattcg tagaactagg tttccaacca aagcataaaa tctgctaccg tatgaaatga
     8101 gccgaacacc agcacaatat cattttcgtt ggctgtttca aacaatactc ggcttgcctg
     8161 tgccacattt tcatagctac aagcggttga atttggcaaa acgtttacca atttcgctaa
     8221 caccgcctcg cctgtttgtc cacgccaaca atctagccct gcacaatgcc attcatcaat
     8281 aatattagct aatggctcga caataccgga taaatcctta tcttctaacg cactaaacac
     8341 cgcatagatt ttttgatttg gttgctttaa ctcccgcagt ttgtcagcta aataacgtgc
     8401 tgcgtgtggg ttatgcccta catcaataat tacttttgca gccggtttag gttgagaaaa
     8461 atgagtaaaa tcggtatccg tcagggtttg aaaacgccct gtcatttgag cttcatttaa
     8521 ggcttgtcga ataatctttt catcaatttc aaatggcagt tgcattaata ctgctaatgc
     8581 ggtgccggcg tttggaatcg gaataagcgg gattggtaaa tcggtaaagg atttttcttc
     8641 agaataccaa tgaaacagat tattcttaat ttcaaactgc cagtctttac cccggtaaaa
     8701 agcgtgacaa tttaacgaat cagcaatctg tttaatcgaa tgagggcaat caggctcgcc
     8761 gatgacaacc ggaatatttt cacggaaaat gccggctttc tcacgcccga tgtcttcacg
     8821 gttatcgcct aaaaatgcaa cgtggtcgat atcaatcgag ataatcacgg caaggcttgg
     8881 atcaataata ttagtggcat ctaatcgccc acctaatccg acttctaaaa tcacaatatc
     8941 gagctgattt tgtttgaata gctcaaatgc agacagcgta ctaaactcaa aataagtgag
     9001 tgaagcggtc ttttttgcat taatttttgc aaatgcttgg acgtggtcgg catcaggtaa
     9061 tacttcgccg ttaattcgca cccgttcatt atagtgaatt aagtgcggtg aagagtaaac
     9121 accaacccga aatccggctt ttaataaggt aacttctaac aaacggcagg tcgaaccctt
     9181 gccgttagta ccggcaacgg taatcacata aggggcaggc ttgagtaaat ccagctctgt
     9241 tgcgacctta cgaatacgat ctaagcccat atcaatcggt ttagaatggg cttgttctaa
     9301 ataggaaagc cacgtttcca aagaatccgt ggctttaggt atgcttaatg tattcattca
     9361 gatattttat tctgcgtttt ctacaaccaa ttccgccact ttaaacggcg ttggttgatt
     9421 ggttaatttt gcacaaagac gggaaagggt atcacgcatc tctttacgat gcacgatcat
     9481 atcaactgcc ccgtgttcta ataagaactc ggcacgttgg aaaccttccg gcagtttttc
     9541 acgtacggtt tgctcaatta cacgaggacc agcaaagccg attagggctt ttggctcagc
     9601 aatattcaca tcgcccagca ttgccaaact tgcggaaacc ccacctaaag ttgggtcggt
     9661 taatacagaa ataaacggta cgccctgctc tttcattttg gctaaaatcg cactggtttt
     9721 tgccatttgc attaaagaga ataacgcctc ttgcatacga gccccgcccg atgccgaaaa
     9781 acagataaac ggaatttttt cagctaaagc tttttccgca gctttcacaa attttgcacc
     9841 tactacagac cccattgaac cgcccataaa ctcaaagtta aaggaggccg taaccaccgg
     9901 catattatgc aatgtaccgg caagcacgat aaaagaatct ttctcaccgg tttgtttttg
     9961 cgcggcagtt aaacgatctt tatatttctt taaatcttta aatttcaaca catcttccgg
    10021 ctctaagtcg gcagcgattt cgaccgcaga atctttatct aacaaattca ataaacgggt
    10081 gcgggcatca atacgcatat gatgatcgca ttttggacaa acctgttggt tgcgttgtaa
    10141 ttcttcgcta tagagaactt gttcacaact tgtgcatttt gtccatacac cttccggcac
    10201 ttttgatttt gcattgcttg atgatgaaga gtctctacct aaaattctgt ctaaccagct
    10261 cattattatt ccttttggat tgagttgttg ggttcactaa atggttgcta ttaaagcata
    10321 atttatcggt ttttgatatg ttttcttgac atatcagatc actaactatg tgtataagtt
    10381 cgataaaaaa acgcaatcag aagaatgatt aacatcacca caatttgaat taagcgtttt
    10441 ttggttaatt tttccgctgc cattgctctg ctcatactta ataaatttcc gcattataag
    10501 cgaaaaagca cgggctatgt agaatttgca aaattttgat caaaaataac cgcttgtaaa
    10561 aaggaaatac tatggcagca accattgaac aatttcttga ggttgtaaac caacttcgtc
    10621 accctgaaca cggctgcccg tgggatctca aacagaattt tgacacgatg ttccccactt
    10681 attggaagaa acctacgaag tagcggaagc gattcacacc caagatcgca ctgccttgcg
    10741 tgaagagtta ggcgatttat tactgcaagt ggtattttta agccaattag cgaaagagga
    10801 aggcagtttc acttttgatg atgtagtaac ggatattcac gataaactga tttaccgcca
    10861 ccctcacgtt tttggtgatg tgaaagctac taacagcgaa gaggccttac aaagttggga
    10921 agcacaaaaa gcgaatgatg caaaacaccg tagccaagat tctattttta gatgatttac
    10981 cttttgcttt gcctgctctt acccgtgcaa ataagctaca aaaacggtgt gcaaaagttg
    11041 gattcgattg ggataaccct cacgatgtgc tggcaaaagt cgaagaagaa ctcgatgaag
    11101 tcaaagcaga aatcgcacaa tatccggctc gctccatcga gcttgctgaa gaattaggcg
    11161 atctcttgtt tgcgattgta aatttatgcc gccattatca taccgatgcc gaggaaattt
    11221 tacgcaatgc aaatctaaaa tttgaacatc gctttcgaaa agttgaaaaa tctgtgaaaa
    11281 aatcgggaag aactgtaaaa gaatgtaaat tagaagaact agatgtaatt tggcacaaaa
    11341 taaaagtggt aaaataaaaa gcaccaattg ttatactaat ttttaccttt gtaaagttag
    11401 ttttaatttt atagggaata ttttatgtca aaaatcttat taatagatga tgatattgag
    11461 tttactgagc tactaactga attactttca ttagaaggat ttaaaatgaa agttgtgcat
    11521 aatggtttag aaggcttaaa tgagttagag tctaatcaat atgatttagt attactagat
    11581 gtgatgatgc cggtattaag tggcgtgaaa acattaaaac gtatacgaca aaaatactca
    11641 ttacccgttt taatgttaag tgcaagagat gatcaaattg atagaatctt aggtttagaa
    11701 ttaggggctg acgattatgt accgaaacct tttaataatc gtgaactagt cgctagaatg
    11761 aaagcgatac ttcgaagaac aacctctcgc ccagcttcaa cagaccattc tgaacagaat
    11821 tatactgaaa acatctctaa atcattacaa tttgccggag ttgaattaca ttcaggacgt
    11881 cagcaggctt attatcaagg atgtgatctt gatttaacgg ggactgaatt tgcattatta
    11941 caaatgttaa tgcgaaactc aggggagatt ttgtccagag aattattgag tttaaaaatt
    12001 ttagggaaaa atttaacgcc ttatgatcgt gcaattgata tgcatatttc taatcttcgt
    12061 aaaaaattac ccgaacggga agatggatta ccttggttta aaaccttaag aggtcggggt
    12121 tactta
//
LOCUS       DANMCL010000085        12051 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.085, whole genome shotgun sequence.
ACCESSION   DANMCL010000085 DANMCL010000000
VERSION     DANMCL010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 12051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12051
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.085"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..711
                     /locus_tag="PXF40_002131"
     CDS             <1..711
                     /locus_tag="PXF40_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5803430.1"
                     /translation="PKNPNFLRHLITLFEDKNFISLDFFAGSSSFPHAILESNRIDKG
                     NRKFIAVQYPEEIDIKSKNGKVAKQFCQRKNLPLYITEISKERIRRAGKQILQNNPEN
                     RPLDVGFKVFKLTESHFKQWQSPTSENLADQLEMFIDPVSEKADTQAVLYELLLRLGL
                     KLTAKVRLENKVFWVEENGLIFALLLNAADEEIIQTVIAQQPKKVIALDRLFNGNDAR
                     KKNTELQMQDAGITFFVI"
     gene            721..3357
                     /locus_tag="PXF40_002132"
     CDS             721..3357
                     /locus_tag="PXF40_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HDL5803431.1"
                     /translation="MELQFETLEYQLQAVNATVNLFVGQPNAATEFSLKAQNDMRFVP
                     NLGLQISDEQLQQNLANLQNRQKIDRTLLVEQGKNFTVEMETGTGKTYVYLRTIFELN
                     RQYGWQKFVIVVPSVAIREGVLHTLETTKSHFNTVFDNPSVNQKFEYKSNQTSRLKSF
                     ASANHIEILVMNIDAFTKESNVINTVNESGDAPIFYIQQANPIVIIDEPQNMETEIRR
                     NAIESLSPLFTLRYSATHKNAYNPIFSLNPVQAYEMGLVKQIEVDSVLAENEVNGAYL
                     SLKEIKTGAKSWSAKIEILFNDKKAMKKKVISVKPNQDLYELSNQNEMYRSGFILSGM
                     DTDSQMVSFSNGTQIFQGAEHSQLKEDVQKMQIRRTIGEHLQKEKKLRPLGIKVLSLF
                     FIDKVDNYRPSAQSPTGGKFAKWFEEIYLELAKEEPQGVHNGYFSQDKKGVAKDTNGT
                     TQADNETYQLIMRDKEKLLSLENPLRFIFSHSALKEGWDNPNVFQICTLNDTASEMKK
                     RQEIGRGLRLPVNQQGLRIYDRHLNTLTIIANESYEQFAATLQREIEEDCGVQFAKSN
                     VKKREDKKAVRYRKDFSLHPEFAAIWERIKHQTTYRVDFSNAELIESAVEKIRKMPDI
                     EATKIKHSKVKLEMNETGISTNYRSSNETAVNTQWAIPDLLSEIQKKTGLTRATLCKI
                     LQKSDRLQEVFRNPQRFIDLIAEKINLALQQIMTDGVEYHKIAGKTYEMTLFGDFDFY
                     LNQYTFEVQDKTKTIYEDYIALDSQTENIFARHCESSEQVEFYFKLPKRFKIPTPLGS
                     YNPDWAVVFKGENKIYLVAETKNTGKGIQAGVDEEKLDESERMKIDYARKHFKGLQRD
                     YKDLDYRVVQKVEELSAEYCKI"
     gene            3489..5921
                     /gene="gyrB"
                     /locus_tag="PXF40_002133"
     CDS             3489..5921
                     /gene="gyrB"
                     /locus_tag="PXF40_002133"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HDL5803432.1"
                     /translation="MSEQTQATSYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHM
                     VFEVVDNAIDEALAGHCKDIIVTIHSDNSVSVQDDGRGIPVGIHPEEGVSAAEVIMTV
                     LHAGGKFDDNSYKVSGGLHGVGVSVVNALSSKLQLTIRREGHVHEQFYSLGEPDAPLA
                     IIGNTEKTGTSVRFWPSLDIFKNKTEFEYKILSKRLRELSFLNSGVSIKLIDERDGKE
                     EHFKYEGGIKAYVEYLNEGKTHIHNTPFYLTTEKDGIGVEISLQWNDSYNENVYCFTN
                     NIPQRDGGTHLAGFRGALTRALKNYMDNSGVLKKADANIDASGDDAREGLVAVISVKV
                     PDPKFSSQTKDKLVSSEVRGAVESSMNEALSDYLAENPDDAKNIVTKIIDAARAREAA
                     RKAREMTRRKGALDLGGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRDRKNQAI
                     LPLKGKILNVEKARFDKMLSSQEVATLITALGTGIGRDDYNLEKLRYHKIIIMTDADV
                     DGAHIRTLLLTFFYRQMPELIENGYIYIAQPPLYKVKKGKQERYIQDNDEMSQYEIDI
                     ALEGAGLYVSEDAPALSGVALENLIAQYNGVQKLIERLSRRYPTLLLNELIYSKPLSV
                     EFAKNQANMTAWSEQFVATLMAKEVGGSFYRINTLFNEERQIYEPEIIVTTHGMDSTY
                     RLDYNFINGNEYARIVALGNELNDLLSDSAYVVRGERRQEISSFAEALDWLVKESRKG
                     LTIQRYKGLGEMNPEQLWETTMDPVARKMLQVNITDAIAADKLFSTLMGDEVEPRRDF
                     IETNALYAQLDI"
     gene            complement(5974..6936)
                     /gene="cmoB"
                     /locus_tag="PXF40_002134"
     CDS             complement(5974..6936)
                     /gene="cmoB"
                     /locus_tag="PXF40_002134"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005707797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HDL5803433.1"
                     /translation="MIDFRPFYQQIATTDLSAWLETLPLQLKQWEKTTHADYAKWAKV
                     ADFLPNSTACINLKDKVESISSKPLSEGEVKQITHHLKQLMPWRKGPYHLHGIHIDTE
                     WRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFE
                     AVRKLLGNDRRANLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVRGG
                     ELVLETLVIDGDINDVLVPADRYAKMKNIYFIPSVAALINWLEKVGFKNVRCVDEAIT
                     TLEEQRKTDWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANA"
     gene            complement(7033..8796)
                     /locus_tag="PXF40_002135"
     CDS             complement(7033..8796)
                     /locus_tag="PXF40_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HDL5803434.1"
                     /translation="MSEQTFITGKDAALEDSIATFQHKLKTLGFNIEEASWLNPVPNV
                     WSVHIRDADCPQCFSNGKGASKKAALASALGEYFERLSTNYFWADFYLGQEIANSEFV
                     HYPTEKWFPIDDEAIPPMEMMDEFLWEYFDPNGEITPELLVDLQSGNYDRGIVTLPYV
                     RQSDNETVYIPQSIIGNLFVSNGMSAGNTKNEARVQGLSEVFERFVKNRIITEAISLP
                     EIPQSVIDGYPTIKASIEKLEQEDFPILCYDASLGGEFPVICVILLNPNNGTCFASFG
                     AHPNFQVAFERTVTELLQGRSLKDLDVFAPPSFNNEDVADHANLETHFIDSSGLISWD
                     LFKRDADYPFVHWDFSGTTEQEFNNMMAIFNKHNQPVYIMDYEHLGVYACRILAPGMS
                     NIYPSDDLVYANNNMGMDWREILLDLPHFHHDAETYQELLDELDEQSIDDLTRVREFI
                     GVVAEKGSAMQTLRIGELKSMLHLALGNLEQASDWANWTANMNASVFSAERNNYYRCL
                     IQSIELFLDEERDSEQYRMVFEKMYGKQAVEAAWGAIQGGNPFHGLTASDESLENMTA
                     HQKLLNAYRKVQKAKVNPIAR"
     gene            9060..11348
                     /locus_tag="PXF40_002136"
     CDS             9060..11348
                     /locus_tag="PXF40_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated helicase/endonuclease Cas3"
                     /protein_id="HDL5803435.1"
                     /translation="MEEHTIQSFYAHSGKLSDHSDWQTLLSHANNVGLLAAEFAAPFA
                     SQEIARCTGLLHDLGKYSERYQKRLHGGERVNHSTAGAKIAVERWGPLGKMMAFCIAG
                     HHAGLANGSGEGKNRSTLTQRLQEQFGYGHKDLPVLDAIWQQELNLPEKLPLPPLKPS
                     KNEPFFSYAFFIRMLYSCLVDADFLDTEAFYANLEKRPLERGNYPNLTALHQQFNQFI
                     AQFRERIATQTPNTQEAQRKAEVNRLRSEILDYAVSQAKQETGLFSLTVPTGGGKTFT
                     SMAFALEHAKQYGLCRIIYVIPFTSIIEQNAAEFRKAFGELGTEAVLEHHSTFDHDSL
                     PDKSSRDKLKLASENWDTPVVVTTAVQFFESLFADRSSRCRKLHNIVGSVIILDEAQM
                     LPLNLLRPIMAAIDELARNYQCSVVLCTATQPAIHQANGFYKGFENVREIAPNPTALF
                     EKLKRTTVKHIGIQTDVELQSKLADNPQMLIIVNNRRHARALYDSAKQLEGAYHLTTL
                     MCAKHRSQTLTEIRLRLKQNLPCRVIATSLIEAGVDVDFPLVMRAEAGLDSVAQAAGR
                     CNREGKRLSVESNVWVFQPEEQWKAPPELGLLSGCMRSTVQVHADDLLNPKAINHYFQ
                     AVYEAKGKELDKPNILKACHDAGQSLNFPFQKIAEDFRMITSHLIPVIIPFDQEAENL
                     IDRLRYADQVGGILRKLQPYTVQVPEKALAELYNAGRVETINETNFGKQFYCLIGMDL
                     YDEVAGLSWENVDFLESEKLVL"
     gene            11479..>12051
                     /locus_tag="PXF40_002137"
     CDS             11479..>12051
                     /locus_tag="PXF40_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803436.1"
                     /translation="MREPLLDEDELKKWLQTIFTDNLVIIVGSGLSCAEGLPGMGALA
                     DRLKERMPECLDDIDKVTWNTISDCLDSEGLEGALLKHQANETIEAAIIKITAEYVLS
                     EEQKAINKCIAENQKLKFSYLLPHISASNPKIARVITTNYDRLIEFAAEYENWGIDSM
                     MVGRYWGKHNPDLSRKLQIRDIRVKGKCPKL"
BASE COUNT         3798 a         2303 c         2582 g         3368 t
ORIGIN      
        1 cctaaaaatc ctaatttttt aagacattta ataactctat ttgaagataa aaattttatt
       61 tctttagatt tctttgctgg cagttcatca tttccacacg caatattgga aagtaataga
      121 attgataagg gtaatagaaa atttattgcg gttcaatatc ctgaagaaat tgatatcaag
      181 agtaagaatg gaaaagtagc aaagcaattt tgccaaagaa aaaatttacc actatatata
      241 actgaaattt caaaagaacg tattcgccgt gccggaaagc agattttgca aaataacccc
      301 gaaaaccgac cgcttgatgt aggttttaaa gtcttcaaac tgacagaaag ccattttaaa
      361 caatggcaat cgcccacatc tgaaaattta gccgatcaac ttgaaatgtt tattgatcct
      421 gttagtgaaa aagcggatac gcaagccgtt ttatatgagc ttttattgcg tttagggtta
      481 aaactcacgg caaaagtgcg gttggaaaat aaggtgtttt gggtggaaga aaacgggctg
      541 attttcgcct tgctgttaaa tgcagccgac gaagaaatta ttcaaactgt tatcgctcaa
      601 caaccgaaaa aagtcatcgc tttagaccgt ttattcaacg gcaatgatgc ccggaagaaa
      661 aacaccgaat tgcaaatgca agatgccggc attacgtttt ttgtgattta aggagaaaaa
      721 atggaactcc aatttgaaac cttagagtat caattacaag ccgttaatgc cacagtaaat
      781 ttgtttgtcg gacagccgaa tgccgcaact gaattttcac tcaaagccca aaatgatatg
      841 cggtttgtgc cgaatttagg cttgcagatt agtgatgagc agttacaaca gaatttggct
      901 aatctgcaaa acaggcaaaa aatcgaccgc actttgcttg tcgaacaggg aaaaaatttt
      961 accgtggaaa tggaaactgg tacagggaaa acctatgtct atttacgcac gatttttgaa
     1021 ttaaaccgtc aatacggctg gcaaaaattt gtgattgtcg tgccgagtgt ggcaattcgt
     1081 gagggagtgt tgcatacgtt ggaaactaca aaaagccatt ttaatacggt atttgataac
     1141 ccgagcgtca atcaaaaatt tgaatataaa agtaaccaaa cttcacgctt aaaatccttt
     1201 gctagtgcta atcatattga aattttagtg atgaatattg atgctttcac caaagaaagt
     1261 aacgtgatta ataccgtgaa tgaaagcggt gatgctccga ttttctatat tcaacaggcg
     1321 aatccgattg tgattattga tgaaccgcaa aatatggaaa cggagattcg ccgtaatgcg
     1381 attgagagtt taagtccgct tttcactttg cgttattctg ccacccataa aaatgcgtat
     1441 aacccgattt ttagcctcaa tccggtgcaa gcctatgaaa tgggattagt taaacaaatt
     1501 gaggtagata gcgtattggc ggaaaatgag gtaaatggag cttatctttc cctcaaagag
     1561 attaaaacag gggcaaaaag ctggtcggca aaaatcgaaa ttttatttaa cgataaaaaa
     1621 gcgatgaaaa agaaagtgat tagcgtgaaa ccgaatcagg atttgtatga gctttccaac
     1681 caaaatgaaa tgtatcgttc agggtttata ttaagcggaa tggataccga tagccaaatg
     1741 gttagcttct ccaacggcac acaaattttt caaggggcgg aacattccca acttaaagaa
     1801 gatgtgcaaa aaatgcagat tcgccgcact attggcgagc atttgcaaaa agaaaagaaa
     1861 ttacgaccgc ttgggatcaa ggtgttgtct ttgttcttta tcgataaagt ggataattat
     1921 cgcccttctg cacaaagccc tacgggggga aaatttgcaa aatggtttga ggaaatttat
     1981 ttggagctag ccaaagaaga gcctcaaggc gtgcataacg gttatttctc acaggataaa
     2041 aaaggcgtag caaaagatac taatggcaca acgcaagcgg ataacgagac ttatcaactg
     2101 attatgcggg ataaagaaaa attgctttcg ctggagaatc cgttacggtt tattttctcg
     2161 cattctgcct taaaagaagg atgggataat ccgaatgtgt ttcaaatttg tactttaaac
     2221 gatactgcaa gcgaaatgaa aaaacgccaa gagattgggc ggggcttgcg tttgcctgtg
     2281 aatcaacaag gattgcggat ttatgatcgt catctaaata cgctgacaat tatcgcaaat
     2341 gaaagttacg aacaatttgc cgccacatta cagcgtgaaa ttgaggaaga ttgtggtgta
     2401 cagtttgcca aaagcaatgt taaaaaacgg gaagataaaa aagccgttcg ctaccgtaaa
     2461 gatttcagct tacatccgga atttgcggca atttgggaac ggattaaaca ccaaaccact
     2521 tatcgggtag atttcagtaa tgcggaattg attgaaagtg cggtggaaaa aatccgcaaa
     2581 atgcccgata tcgaggcgac aaaaattaag cattccaaag tgaaattgga aatgaatgaa
     2641 acagggattt caactaatta tcgctcatct aatgaaacag cggtaaatac acaatgggcg
     2701 atacctgatt tattgagtga gattcaaaag aaaaccgggc tgacgcgtgc gaccctttgc
     2761 aaaattttac aaaaatccga ccgcttgcaa gaagtcttcc gcaatcctca acgctttatt
     2821 gatttaattg cagagaaaat caaccttgct ttacaacaaa ttatgacaga cggggtggaa
     2881 tatcacaaaa ttgccggaaa aacctatgaa atgacgttat tcggcgattt tgatttttac
     2941 ctcaatcaat atacttttga agttcaagat aaaacaaaaa cgatttatga agactatatt
     3001 gcactggatt cccaaacaga aaatatcttc gcccgacatt gtgaatctag tgagcaagtg
     3061 gagttttatt ttaaattacc caaacgtttt aaaattccaa cgccattagg cagctataat
     3121 cccgattggg cagttgtgtt taagggagaa aataaaattt acttggttgc cgaaacgaaa
     3181 aatacaggca aaggtattca agcaggagta gatgaagaaa aattagatga aagtgaacga
     3241 atgaaaatcg actatgcccg taagcatttc aaaggcttac agagagatta taaggatttg
     3301 gattataggg ttgtacagaa agtggaggag ctgtctgcgg agtattgtaa aatttaatct
     3361 gtggtcttgt agaattgaga tagactgcaa tttcaactaa aatttaaccg cttgttttgc
     3421 gatactttta cgcatttttc tgctataatc ggcacaattt tttcgatttc aaattagtag
     3481 gaataagaat gtctgaacaa actcaagcaa caagttatga ttcttccagt attaaggtgt
     3541 tacgcggctt agatgcggtg cgtaaacgcc cgggaatgta tatcggcgat accgatgacg
     3601 gtacgggctt acaccatatg gtgtttgagg tggttgataa tgcgattgac gaagcattag
     3661 ccgggcattg taaagacatt attgtcacaa ttcattccga taattcggtt tctgtgcaag
     3721 atgacggtcg tggaattccg gtggggattc acccggaaga aggcgtttcg gcagcagaag
     3781 tcattatgac tgttcttcac gcaggcggta aatttgacga taactcctat aaggtttccg
     3841 gcggtttgca cggtgtgggc gtatcggtgg tgaatgcact ttcctctaaa ttacaactca
     3901 ctattcgccg tgaaggacac gttcacgagc aattctatag cttaggtgag cctgatgcac
     3961 ctttagcgat tatcggcaat accgaaaaaa cggggacgtc ggttcgtttc tggccaagtt
     4021 tggatatttt caaaaataaa accgaatttg aatataaaat tctgtctaaa cgcttgcgtg
     4081 aactatcatt tttgaattca ggcgtttcga ttaaattaat tgatgaacga gacggcaaag
     4141 aagagcattt taaatatgag ggcggtatta aagcctatgt tgagtattta aacgaaggca
     4201 aaactcatat tcacaatacg ccattctatt tgaccactga gaaagacggc attggcgtgg
     4261 aaatttccct acagtggaat gacagttaca acgaaaatgt gtactgcttt accaataata
     4321 ttccacagcg tgatggcggt acgcacttag ccggtttccg tggggcatta actcgtgcgt
     4381 tgaaaaacta tatggataac agcggggtat tgaaaaaagc cgatgcgaac attgatgcct
     4441 caggtgatga tgcccgtgaa ggtttagtag cggtgatttc ggtgaaagtg ccggatccga
     4501 aattctcctc acaaaccaaa gataaattgg tgtcgtcaga agtgcgtgga gcagtggaaa
     4561 gctcaatgaa tgaggcttta tccgactatt tagccgaaaa tccggacgat gcaaaaaata
     4621 tcgttaccaa aattattgat gcagcccgtg caagagaagc agctcgtaaa gcccgtgaaa
     4681 tgacccgccg taaaggggcg ttagatttag gcggcttacc gggtaaatta gctgattgtc
     4741 aggaaaaaga tccggcgtta tcggagcttt acttggtgga gggtgactct gccggtggct
     4801 cggcaaaaca agggcgtgac cgtaaaaacc aagcgatttt gccgttaaaa gggaaaattc
     4861 tgaacgtgga aaaagcccgc tttgataaaa tgctttcttc acaagaagta gcaaccttga
     4921 ttaccgcttt aggcacaggc atcgggcgtg atgattataa tttggaaaaa ttacgttacc
     4981 acaaaatcat tattatgacc gatgcggacg tggatggtgc acatattcgt acgcttttat
     5041 taactttctt ctaccgtcaa atgccggagc tgattgaaaa cggctatatt tatattgcac
     5101 agccaccgct ttataaagtg aaaaaaggca agcaagagcg ttatattcaa gataacgatg
     5161 aaatgtcgca atatgaaatt gatattgcat tagaaggtgc aggcttatat gtgagtgaag
     5221 atgctccagc gttaagtggc gtagcgttag agaacttaat tgcccaatat aacggcgtac
     5281 aaaaattaat tgaacgttta agccgtcgtt acccaacatt attacttaac gaattaattt
     5341 attcaaaacc gctttcggtg gaatttgcaa aaaatcaagc aaatatgacc gcttggagcg
     5401 agcaatttgt cgctacattg atggcaaaag aggtgggcgg cagtttctac cgtattaata
     5461 ccttgttcaa tgaagaacgc caaatttatg agccggaaat tattgtgact acacacggta
     5521 tggacagtac ctatcgttta gattacaact ttatcaacgg taatgaatac gctcgcattg
     5581 tggcattagg caacgagctg aacgatttac tatctgattc agcctatgtg gtgcgtggtg
     5641 aacgtcgcca agaaatcagc agttttgctg aagccttaga ttggttggtg aaagaatctc
     5701 gtaaaggctt aactattcaa cgttataaag ggttaggtga gatgaatccg gaacaattat
     5761 gggaaaccac gatggatccg gtggctcgta aaatgctaca ggtcaatatt accgatgcga
     5821 ttgcggcaga taaactcttc agtacgctga tgggcgatga agttgaacca cgccgagatt
     5881 tcattgaaac taacgctttg tatgctcagt tagatattta gttaaaaaat ccgcatttga
     5941 catgcggatt ttttattctc ttaaactagc attttaagca ttcgctaaaa tcaccgcccg
     6001 cttcggagca gggtagcctt caatggtttt gctatgatcg tttggatcta aaaaatccac
     6061 taaactttca ttttccaacc aatcggtttt tcgctgctct tctagtgtag tgattgcctc
     6121 atcaacacaa cgcacatttt taaagccgac tttttccagc caattaatga gtgcagcaac
     6181 agaaggaata aaatagatat ttttcatttt cgcatagcga tcagccggca ctaaaacatc
     6241 attaatatcg ccatcaatca ccagcgtttc taacaccaat tcaccgcctc tgactaattg
     6301 ggctttgagt tgagaaagat gatcaagcgg tgatttgcga tgataaagca cccccattga
     6361 aaacacggta tcaaaagcag caagcggttg catttgctca ataccaagtg gaatcagatt
     6421 agcccgtcta tcattcccta agagtttccg cactgcctca aattggcaca ggaacagctc
     6481 ggtcgggtca ataccaacta ccatttttgc cccttcgcct accattcgcc acatatgata
     6541 accgctaccg cagccgacat ctaaaatggt gcggtctttt aacggtgcaa gatgcggaag
     6601 cacacgatcc catttaaaat cggaacgcca ttcggtatca atatgaatcc cgtgtagatg
     6661 ataagggcct ttacgccacg gcattagttg ctttaaatgg tgggtaattt gcttgacttc
     6721 cccctcagat aaaggcttgc ttgaaataga ctcaaccttg tcttttagat tgatacaagc
     6781 ggtcgaattt ggtaaaaaat ctgcaacttt tgcccacttg gcatagtcag cgtgggtggt
     6841 cttttcccat tgtttgagtt gtaagggtaa ggtttctaac caagcagaaa ggtcggttgt
     6901 ggcaatttgt tgataaaaag gacgaaagtc aatcattttg aaatttatgt ctaggggaga
     6961 gacctatgcc ctcccgaaag gtagtaaata gaaaggacag gcacagaacc tacccctacg
     7021 aaaaatataa aattatctcg caatcggatt tactttcgct ttttgcactt tgcgataagc
     7081 gttcagtaat ttctgatgtg cagtcatatt ttcaagcgat tcgtccgatg cagttaaacc
     7141 gtggaacggg ttaccgcctt ggattgcacc ccaagcagct tcaaccgctt gtttaccgta
     7201 cattttctca aacaccatac gatattgttc cgaatcacgc tcttcatcta agaacaactc
     7261 aatcgattgg attaagcagc ggtaataatt gttacgttct gctgagaata cgcttgcatt
     7321 catattcgct gtccagtttg cccagtctga ggcttgctct aagttaccta aagctaaatg
     7381 cagcatcgat ttaagctcac cgatacgcaa tgtttgcatt gcagagcctt tctctgccac
     7441 cacgccaata aattcacgca cacgggttaa atcatcaatg ctttgctcat ctaattcatc
     7501 aagcagttct tggtaagttt cagcatcgtg atggaaatgt ggcaaatcta acaagatttc
     7561 acgccaatcc atacccatat tgttattggc atagaccaaa tcatcgcttg gatagatatt
     7621 cgacataccc ggtgcaagaa tacggcaagc gtacacacct aaatgctcat aatccataat
     7681 atacacaggc tgattatgct tgttgaaaat cgccatcata ttattaaatt cttgctccgt
     7741 tgtgccggag aagtcccaat gcacgaacgg ataatccgca tcacgtttga aaagatccca
     7801 cgaaattaga ccgcttgaat caataaagtg tgtctcaagg ttcgcatgat ctgctacatc
     7861 ttcattatta aatgaaggtg gggcaaacac atctaaatcc tttaagctac ggccttgtaa
     7921 taactcggtt acggtacgtt caaacgccac ttggaaattc gggtgtgcac caaaagaggc
     7981 aaaacaagta ccgttatttg ggtttaacaa gatcacacaa ataactggaa attctccgcc
     8041 taatgaagcg tcatagcata aaatcgggaa gtcttcttgc tctagtttct cgatagaggc
     8101 tttgattgtc ggataaccgt caatcacact ttgcggaatt tccggcaagc tgattgcctc
     8161 agtaataata cggtttttga caaaacgctc gaacacttcg gataagccct gcactcgagc
     8221 ttcatttttt gtgttgcctg ccgacatacc gtttgaaaca aacaggttgc cgataatgct
     8281 ttgcggaatg taaaccgttt cattgtcaga ttggcgaacg taaggtaggg taacaattcc
     8341 acgatcataa tttcctgatt gtaaatcaac caataattcc ggcgtgattt caccattcgg
     8401 atcaaaatat tcccataaaa actcgtccat catctccatt ggtggaatgg cttcatcatc
     8461 aatcggaaac catttttcgg ttggataatg cacaaattca ctattagcaa tctcttgacc
     8521 taaataaaaa tccgcccaga aatagttggt agataaacgc tcaaaatact cacctaatgc
     8581 agaggcaaga gcggcttttt tgcttgctcc cttaccgtta gaaaaacatt gcggacagtc
     8641 tgcatcacga atatgcaccg accacacatt cggaacagga tttaaccaag aggcttcttc
     8701 aatattaaaa cctaaggttt ttaatttatg ctgaaaggtc gcaatgctgt cttcaagtgc
     8761 agcatcttta ccggtaataa aagtttgttc tgacatgata atacctttaa cttgtcgtaa
     8821 aaatggcaac attctagcaa aaatccccat agataagtaa attttttgtg aaatttctgc
     8881 tgaaagaaca gatttcaaaa cttagaaaaa atgattacaa gcggtcaaat tttacttgaa
     8941 ttttgcaagt gaaatttgtg tttgatttag attaagaaaa tattatctag gatatataca
     9001 gaataaaagg ttagaggtag tattgcttgt gttaggaagg aaatattgaa ggtataaaaa
     9061 tggaagaaca tactattcag tctttttatg cccattcggg gaagctttca gatcattcag
     9121 attggcaaac tttactcagc cacgccaata atgttggctt gcttgccgcc gaatttgctg
     9181 cgccgtttgc ttcacaagaa attgctcgct gcacggggct attgcacgat ttaggcaaat
     9241 atagtgaacg ttaccaaaag cgtttacatg gcggagaacg ggtaaatcac tctactgctg
     9301 gtgcaaaaat tgcagtggaa cgttgggggc ctttgggcaa aatgatggcg ttttgtatcg
     9361 caggccacca cgctgggtta gcaaatggtt ctggagaagg gaaaaatcgt tctacactta
     9421 cacaacgttt gcaagagcaa tttggctatg gtcataaaga tctaccggta cttgacgcta
     9481 tttggcagca agaacttaat ttgcctgaaa aattgccctt accgccgtta aagccttcta
     9541 aaaacgaacc tttcttttct tacgcctttt ttatccgaat gctctattct tgccttgtcg
     9601 atgccgactt tcttgataca gaagcttttt atgccaatct cgaaaaaaga ccgcttgaac
     9661 gaggaaatta ccccaattta accgcactcc atcagcaatt taatcaattt attgcacagt
     9721 ttagggagcg aattgccact caaacgccta atacgcagga agcacaacgt aaagcggaag
     9781 taaaccgctt gcggagtgaa attttggatt atgccgtatc tcaagcaaaa caggaaacag
     9841 gtctgttttc tctgactgtg ccaacgggcg gtggtaaaac ctttacttca atggcgtttg
     9901 cccttgagca tgctaaacag tatggtttat gccgcattat ttatgttatt ccgtttacca
     9961 gcattattga acaaaatgct gcggaatttc gtaaagcttt tggcgaatta ggaacagagg
    10021 cggtattgga acatcacagc acttttgatc acgatagcct acctgataaa tcaagccgag
    10081 ataagctgaa attggcatca gaaaattggg atactcctgt tgtggttaca actgcagtgc
    10141 aattctttga aagtttgttt gccgaccgtt cttcacgctg tcgcaaattg cataatatcg
    10201 tcggtagcgt gattattttg gacgaagccc aaatgctacc gttgaattta ttacgcccaa
    10261 ttatggctgc gattgatgaa ttagctcgca attatcaatg ttcggtagtg ctttgcacag
    10321 cgacacaacc cgctattcat caagcgaacg gtttttataa aggatttgaa aatgtgcgag
    10381 aaattgcccc taatccaacc gcactttttg aaaaattgaa acgtactacg gtaaagcata
    10441 tcggtattca aacagatgtg gagttgcaaa gcaaactcgc agataaccca caaatgctga
    10501 taatcgtgaa taaccgccgt cacgcccgag cgttatatga ttcagcgaaa cagttagagg
    10561 gagcttatca cctcaccacg ctaatgtgtg ctaaacaccg ctcacaaacg ctgactgaaa
    10621 ttcgtcttcg cctaaaacaa aacctacctt gccgagtgat tgccacttct ttaattgaag
    10681 ccggtgttga tgtcgatttc ccactggtta tgcgagctga agcaggacta gattcagtgg
    10741 ctcaagcagc agggcgttgc aaccgagagg ggaaacgttt atctgtagaa agcaatgttt
    10801 gggttttcca acctgaagaa cagtggaaag caccaccaga gctaggctta ctttctggct
    10861 gtatgcgttc aacggttcag gttcacgcag atgatctact taatccgaaa gcaatcaatc
    10921 attatttcca agcggtttat gaggctaaag gaaaagagct ggataagcca aatattttaa
    10981 aggcgtgtca cgacgctggg caaagcctta atttcccatt ccaaaaaata gctgaagatt
    11041 tccgaatgat cacaagccat ttaattccgg tgattatccc tttcgaccaa gaagccgaaa
    11101 accttattga ccgtttacgc tatgcggatc aagtaggcgg tattttaaga aaactccagc
    11161 cttacactgt gcaagtaccg gaaaaagcat tagccgaact ctataacgct ggcagagttg
    11221 aaaccattaa tgaaaccaac ttcggcaaac agttttactg cttaattgga atggatttgt
    11281 atgatgaagt ggcggggttg agttgggaga atgtggattt tcttgagtcg gagaaattgg
    11341 ttttatagat gaatgtttat tttaacttct ttataagttt aattttgcat agatatactt
    11401 taatatacca aatagcctat gacgtctcgt agtaaacagc tagtttgtaa gaatagatat
    11461 ttggaaggga aacgtaaaat gagagaacca ttattagatg aagatgaatt aaaaaaatgg
    11521 ttgcaaacta tttttactga caatttggtc attattgtcg gttcgggttt gtcctgtgcc
    11581 gaaggtttgc cgggaatggg agcattagct gatagattaa aagaacgaat gcctgaatgt
    11641 cttgatgata tagataaggt aacatggaat accatttctg attgtctgga ttctgaaggc
    11701 ttggaaggtg cattgttgaa gcatcaagca aatgagacga tagaagccgc tattattaaa
    11761 ataacagccg agtatgtact ctccgaagag caaaaagcga taaacaaatg tattgctgag
    11821 aatcagaagc tcaaattttc ttatttgctt ccccatattt cagcttcaaa tcctaaaatt
    11881 gcccgtgtaa ttactactaa ttatgataga ttgattgagt ttgcggcaga gtatgaaaat
    11941 tggggaatag attcaatgat ggtcggtcgt tattggggaa aacataatcc tgatttgagt
    12001 aggaaattgc agataagaga cattagagta aaaggtaaat gtccaaaatt g
//
LOCUS       DANMCL010000086        11899 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.086, whole genome shotgun sequence.
ACCESSION   DANMCL010000086 DANMCL010000000
VERSION     DANMCL010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11899
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.086"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            93..440
                     /locus_tag="PXF40_002138"
     CDS             93..440
                     /locus_tag="PXF40_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803437.1"
                     /translation="MFREEAIEYQSKKWKSTAVLFSRVPALVVFSISFFIFTAFILFI
                     VFGNYTRRETVVGELVMQSHPILLSAPKSGYISENYIQPHQQVKKRAIRWLKLRWIEL
                     RIAKILMLILFFR"
     gene            437..1354
                     /locus_tag="PXF40_002139"
     CDS             437..1354
                     /locus_tag="PXF40_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HDL5803438.1"
                     /translation="MKSQIQATEQAITALYKNKSETINSLEKQIKNSQKIYQDKQSYL
                     VEIEKSMNDYAELVKRYEKLLKVGHSSHDEVNIQKSRYFQQKSLFNELKQELIQLKST
                     QLSLENEIETRKTEFNNQIIRYEMQKSDLNIRLMEFESVSDIIVNASLDGKIESTSVT
                     VGQIIKENDPLAQILPQNKGNYQLVMWVPNSAISFIKQGDEVNIRYEAFPFEKFGQFK
                     GKITSISTLPASLQELSFYKNLPVNLEQGIPLYKILIELADQNVKYNDTSLYFMSGMK
                     AEATLFLEKRKLYEWIFFPMYQLRKNMEQ"
     gene            1354..2145
                     /locus_tag="PXF40_002140"
     CDS             1354..2145
                     /locus_tag="PXF40_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase C39"
                     /protein_id="HDL5803439.1"
                     /translation="MTGIKQLKFDFRRRIPVILQTETAECGLACLAMMLGYYDKNTNL
                     FELRSQYGTSSRGVTLHTLISIANDCGLITRPLSLELDEVPQLRLPCILHWDFNHFVV
                     LTHASEKQFIIHDPAFGKRKLSRAEFSNHFTGVALEVWSEVKFEKSNNENTISLYETL
                     KHISGIKGALVKIFALSMLIELIALLMPIGTQLVMDHVMQAKDQSLLLIICIGLFLFT
                     LFRTMVSMFRAWVSLKMNYLIDFQWTASFFSHLLKLPLDFFENAK"
     gene            2523..3440
                     /locus_tag="PXF40_002141"
                     /pseudo
     CDS             2523..3440
                     /locus_tag="PXF40_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014167835.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(3442..4110)
                     /locus_tag="PXF40_002142"
     CDS             complement(3442..4110)
                     /locus_tag="PXF40_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HDL5803440.1"
                     /translation="MKYLYALIFSLFFSSVYAAERQLQCKVVGISDGDTLTCLVNKTP
                     LKIRLQHIDAPEQAQPYGNKAKQALAQFVFQQNITAIVSGYDRYQRLLATLYLNDKNI
                     NLALVENGMAWAYTTKREYIEAQDQAQQAKIGLWQDKFPINPSQWRKTHTSTLPQAVK
                     KPENIANQPPTIDCQIKLSCNQIGNYAQAKRYFQQCGWKELDGNNDSIPCNKLYRQEQ
                     KNRN"
     gene            complement(4154..5521)
                     /locus_tag="PXF40_002143"
     CDS             complement(4154..5521)
                     /locus_tag="PXF40_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HDL5803441.1"
                     /translation="MSIDTILNQINSFVWGPPLLILISGVGLYLTFSLKGIQLSQLGQ
                     AFRYMFKPEKGKGQSGDISAFAALSTALAATIGTGNIVGVATAIHSGGPGALFWMWLI
                     ALFGMATKYAEGLLAIKYRTKDRAGFVAGGPMYYIELGMGKKWRWLAKAFAFFGVLVA
                     LLGIGTFPQVNGITHALESTFDVPIIFSAIILTLIVTAIILGGVQRISKIATIVVPFM
                     AIGYVIAALSVILLNMEKVPQAIITIVHAAFNPQAALGGAVGFTVMQAIQLGVARGIF
                     SNESGLGSAPIAAAAAQTKEPVRQGLISMTGTFLDTIIVCTMTGLVIVISGAWAGDVK
                     GAELTTTAFTQGLNSSFGAIIVTVGLVFFAFTTILGWCYYGERCFVYLTRGRTQYIKL
                     YRLLFIALIASAPFLQLDTIWTLADIVNGLMAFPNLIALIALRKVIISETKDFFARLK
                     TGKAE"
     regulatory      complement(5640..5735)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            complement(5906..6958)
                     /locus_tag="PXF40_002144"
     CDS             complement(5906..6958)
                     /locus_tag="PXF40_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HDL5803442.1"
                     /translation="MTHSTKTLVAIASIIIILAGIKLSNEIVVPFLLSLFIAIICSPM
                     IKFMTKRKVPLWLAITILLIVFILGFSFLAGIINNTLQEFTNAIPQYKIQLSSRIQVI
                     LELAHRWHIPLTLSQEEIMSKFDPSSIMNLVSKLLMGLSGALSNIFVIFLVVIFMLLE
                     MPVAKYKLALALSPDDDLSNEKEYINQVLEGVIGYLGVKTFVSLLTGGLVWILLEILG
                     VEYAILWAILTFLLNYVPNIGSILAGIPIVIQALVLNGFSIGLGTLIGIVVINMVVGN
                     ALEPKLMGKKLGLSTLVVFLSLLFWGWLLGTVGMLLSVPLTMACKVALESNKATQKYA
                     VLFSDLEEVPKEQKYR"
     gene            complement(7005..7430)
                     /gene="ruvX"
                     /locus_tag="PXF40_002145"
     CDS             complement(7005..7430)
                     /gene="ruvX"
                     /locus_tag="PXF40_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HDL5803443.1"
                     /translation="MTETTTKTVIAFDFGTNSIGCAVGQSITGTAQGLTTFKAQDGIP
                     NWEEIGKLLQDWKPDMLVVGLPLNMDGTEQPLTQRARKFANRLNGRFNLPVELQDERL
                     TTVEAKAEIFSRGGYKALKKDKVDSISACLILESWFENH"
     gene            complement(7430..7990)
                     /locus_tag="PXF40_002146"
     CDS             complement(7430..7990)
                     /locus_tag="PXF40_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HDL5803444.1"
                     /translation="MLENLQGKFLIATPEMDDDYFERTVVYICEHNPQGAMGVVINTP
                     TDLSVLELITRMDFQMANQRDYKKDQMVLSGGPVNQDRGFIIHTKTANDFIHTYPITD
                     KITLTTSGDVLDSFGTLASPEKFIVCLGCSTWRGSQLEQEIAQNYWIVSDANEKTLFE
                     TGYLERWAEAYEMMGLSSIPSRAGRA"
     gene            complement(7990..8721)
                     /gene="rsmE"
                     /locus_tag="PXF40_002147"
     CDS             complement(7990..8721)
                     /gene="rsmE"
                     /locus_tag="PXF40_002147"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007524366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HDL5803445.1"
                     /translation="MRIPRIYQPQPLAGLQSCVLSEDAANHVGRVLRMKQGEQIILFD
                     GSNHVFHATLQAVEKKQIIAKIDSSELDDRESNLPIHLGQVISRGDRMEFTIQKSVEL
                     GVKTITPLWSERCGVKLNDERQDKKLQQWQKIAIAACEQCGRNEIPEIRPIMKLTDWC
                     KEQDDMLKLNLHPRAKYTIRELPNVPKAGVRLLIGSEGGLSAEEIAMTESEGFTEVLL
                     GKRVLRTETASLAAITALQVCFGDI"
     gene            complement(8781..9071)
                     /locus_tag="PXF40_002148"
     CDS             complement(8781..9071)
                     /locus_tag="PXF40_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803446.1"
                     /translation="MPKKLHNIYYTEEALIDLENIAISVSEFTGYASSGIRILEELEN
                     SINNLAIFPTMGVKGAIINTRELYHNGYRIVCEVKENEISIITIVHCSRLYP"
     gene            complement(9052..9225)
                     /locus_tag="PXF40_002149"
     CDS             complement(9052..9225)
                     /locus_tag="PXF40_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803447.1"
                     /translation="MNNPYHNVSQEYLDYLAKKVKQGKEDIKNGRIYSPEEVRKRVIA
                     AAFRGAENAKKVA"
     gene            complement(9397..9984)
                     /locus_tag="PXF40_002150"
     CDS             complement(9397..9984)
                     /locus_tag="PXF40_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803448.1"
                     /translation="MKRSKKTLVLATTFVAALLAGCQSQSNTLTFSTPTPTAVFNTNN
                     QTAAVNVMTQDLRTSREIASYTKNGEVIRLTAVPEVAAMFQQAVQQDLNAKGFQIVQG
                     AANANVVVNIRKFFATVEQGNLRYKADAQVSVKVAVQGSKGNFSKNFNATRGYEGAFG
                     ASNDEIKKVLDQAYSDVVKAIYNDNEIANAIHQFK"
     gene            10076..10387
                     /locus_tag="PXF40_002151"
     CDS             10076..10387
                     /locus_tag="PXF40_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA/IbaG family iron-sulfur metabolism protein"
                     /protein_id="HDL5803449.1"
                     /translation="MSVEQTIIQKIKTEFQPIFFNVENESYMHSSGRGAESHFKLTLV
                     SDKFEGQRTVARHRAVYACLAEELANGVHALALHLYTQGEWEATGGLVPKSLNCLGVG
                     Q"
     gene            10479..10568
                     /locus_tag="PXF40_002152"
     tRNA            10479..10568
                     /locus_tag="PXF40_002152"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10513..10515,aa:Ser,seq:gga)
     gene            complement(10744..11118)
                     /locus_tag="PXF40_002153"
     CDS             complement(10744..11118)
                     /locus_tag="PXF40_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein NlpE N-terminal
                     domain-containing protein"
                     /protein_id="HDL5803450.1"
                     /translation="MKKIALIGFTTAMLGACSLLPQKSVSGTYAGELPCADCEKIQAQ
                     LTLNADKTYQYDTVYFKDKKEYTYRDKGTYSWEPNKPNVIRLEKASGNLAFQVSEQHV
                     ELCDPNGNTVKNSNNYKLGKVR"
     gene            complement(11143..11445)
                     /locus_tag="PXF40_002154"
     CDS             complement(11143..11445)
                     /locus_tag="PXF40_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HDL5803451.1"
                     /translation="MKNSAPKKINDILQNSSLSRIVEKANFINDLNQKIQKRWPESYR
                     GLYRVVNLVDNQLIVSVKNATVRQGLILQQNMLLKQIQTDLPEITQLEFRVNPSVT"
     gene            11566..11886
                     /locus_tag="PXF40_002155"
     CDS             11566..11886
                     /locus_tag="PXF40_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2547 family protein"
                     /protein_id="HDL5803452.1"
                     /translation="MSLFLKHFHRTPFWSQLFLGMVAILALPEIQVAYANESEQETVL
                     NQSFLQYAQSANDIEQQSLFIAELIHKIVEIKPQAVHFCEFFANSYRLDRQNAYPIRA
                     GPQT"
BASE COUNT         3523 a         2243 c         2307 g         3826 t
ORIGIN      
        1 attctcttct taagaagtaa catgtttata agattagctt ttaatgtata taaaataaat
       61 gtgctaatgt agtagtgtaa aattggtatt atatgttcag agaagaagct attgaatatc
      121 aatcgaaaaa atggaaaagc acagctgtac tatttagcag agttccagct ttggttgtct
      181 tttccatttc tttctttatc tttactgcct ttattctatt tattgtgttt ggtaattata
      241 cccgccgtga aacggttgtg ggtgaattag tgatgcaatc tcatccgatt ttattatctg
      301 ccccaaaatc cggctatata tccgaaaatt atattcaacc acatcagcag gtaaaaaaaa
      361 gggcgatccg ctggttaaaa ttacgctgga tagaattacg catagcgaaa atattaatgt
      421 taattctatt ctttcgttga aatcacaaat tcaagcaaca gaacaagcga taactgcttt
      481 atataagaat aaatcagaaa ctattaatag ccttgaaaag cagatcaaaa acagtcaaaa
      541 aatttatcaa gataagcaga gttatttagt ggaaattgaa aaaagtatga atgactatgc
      601 ggagttggtt aaacgctatg agaaattatt aaaagtaggg cattccagcc acgatgaagt
      661 gaatattcag aaaagccgtt atttccaaca aaaatcactg tttaatgagc taaagcaaga
      721 attaattcaa ttaaaatcca cccaacttag cttggaaaat gaaattgaaa cccgtaaaac
      781 cgaatttaat aatcagatta ttcgctatga aatgcaaaaa agcgatttaa acattcgttt
      841 aatggaattt gaatctgttt cagatattat tgttaatgcc tctttagatg gaaaaattga
      901 aagtaccagc gtaacagttg ggcaaattat taaagaaaat gacccgcttg cacaaattct
      961 gccacagaat aaaggaaatt atcagctagt gatgtgggta ccgaatagtg ccatttcatt
     1021 tattaaacaa ggcgatgagg tgaatattcg ctatgaggct tttccgtttg aaaaattcgg
     1081 gcagtttaag ggcaaaatta cgtcaatttc aaccttacca gcttctttgc aagaacttag
     1141 tttttataaa aatctccctg taaatttaga gcaaggtatt ccgctttata aaattctgat
     1201 tgagcttgcc gatcaaaacg taaaatataa tgatacctcc ctttatttta tgagtggaat
     1261 gaaagccgaa gccacgttat ttttagaaaa acgtaaactg tatgagtgga tatttttccc
     1321 tatgtatcaa ttacgcaaaa atatggagca ataatgacag gaattaagca gttaaaattt
     1381 gattttcgga gaagaatacc tgttattttg caaactgaaa cagctgaatg tggcttagcc
     1441 tgtttagcga tgatgttggg ctattacgat aaaaacacca atttatttga attgcgaagt
     1501 caatatggta cttcctctcg tggcgtaacg ctgcatactt taatttctat tgcaaatgac
     1561 tgtggtttaa taactcgccc tctttctcta gagttagatg aagtaccaca acttcgtctg
     1621 ccttgtattc ttcattggga ttttaatcat tttgtagtat taactcacgc aagtgaaaaa
     1681 cagtttatta tccacgatcc tgctttcggt aaacgtaaat tatcccgtgc tgaattttcc
     1741 aaccatttta ccggagtcgc tttagaagtt tggtctgaag ttaaatttga gaaaagcaac
     1801 aatgaaaata ccattagttt gtatgaaacc ttaaagcata tttctggcat aaaaggtgca
     1861 ttagtgaaaa tttttgccct ttcaatgctc attgaactca ttgccttatt gatgccaatt
     1921 ggaacacagt tagtgatgga tcacgttatg caagcgaaag atcaatcatt acttttaatt
     1981 atctgtattg ggctattttt atttaccctt tttcgcacaa tggtcagtat gtttagggct
     2041 tgggtttcct tgaaaatgaa ttatttaatt gattttcaat ggacagccag tttcttttct
     2101 catctcttaa aattaccgct tgatttcttt gaaaacgcca agtaggtgat attcattccc
     2161 gatttagttc attaaaaacc attcagaaaa ctctaacttc aagcattatt accacgatta
     2221 ttgatacgat tatgataatc agtttaatta ttatgatggt gttatatggc ggttggctct
     2281 tttgggtagt attagctttt tcctttatct attttattct tcgaatggtt acttatttag
     2341 tttatcgtca actgaatgaa gagcagatta ttaaaggagc aaaagcccat tcgcatttta
     2401 tggaaacttt atatggtatt acaacgttaa aatcattagg attggaaaat aaacgacaag
     2461 aacagtggat gtcgctcaat gcggatgctt ttaacacatc aattaaggta actaaatttg
     2521 atatgctgtt ttccggtatt cataccttta tttctaccat cgaacagatt ttaattcttt
     2581 ggattggggc gacaatgatg attgaaaatg tgatgacatt aggaatgttt gtcgctttta
     2641 atgcctatcg aggctctttc tcttcacgaa tggggaattt aattgatatt atttttagcc
     2701 taaaaattct ttcattacat agagagcgga ttgcagacat tgctttaaat gaagtcgaag
     2761 atgaaagtaa atatcaagaa ctcagatttg aacataacca aacagatata gaagttaaag
     2821 acctttgttt caaatacgat cctttttcta aaaatgtgct tgaaaatgtc aatttagtga
     2881 tcagaagtgg ggaaagtgtt gctattaccg caccatcagg ttatggcaaa acaacgttat
     2941 taaaattaat tgcaggttta ttaaaaccaa cctcaggttc tgtgtatttt aacggcattg
     3001 atatttatca gttaggatta agtcaatatc ggagccaaat tgcttgcgta ttacaggaag
     3061 ataaattctt ttctggttcc attttagaga atattgttag ttttgaaagt aattatgatc
     3121 gagaatgggc tatcgaatgt agcaaacttg cgaatattca caatgatatt atggcaatgc
     3181 cgatgaatta tgaaacctta ttaggagaat taggaaataa tttgtctggc ggacaaagat
     3241 aacgattgtt tattgctcga gctttatata aaaagcctaa aattcttttg atggatgagg
     3301 cgactagcca tttagatgaa gaaaatgaga agcttgtcaa tcaagctatt tcacgaatga
     3361 agataacaag gattattatt gctcatagac aatcgactat tcagtcggcg gatagaatta
     3421 ttgccctgaa tgacaggtaa attaattcct atttttctgt tcttgccgat aaagtttatt
     3481 gcacggaatg ctgtcgttgt tgccgtctag ctctttccag ccgcattgtt gaaagtagcg
     3541 ttttgcctgt gcgtaattgc cgatttggtt gcagcttaat ttaatttggc aatcaatcgt
     3601 tggtggctgg tttgcaatat tttccggttt tttgaccgct tgtggtaagg ttgaggtgtg
     3661 tgtttttcgc cattggctcg ggttaatcgg gaatttgtcc tgccataagc cgattttagc
     3721 ttgctgtgct tgatcttgtg cttcgatata ttcccgcttt gtggtgtaag cccacgccat
     3781 accgttttcc actaaggcta agttgatgtt tttatcgttt aagtagaggg tggcaagtaa
     3841 tcgttggtaa cgatcatagc ctgaaactat ggcagtaatg ttttgttgaa acacgaattg
     3901 agccagagct tgtttggctt tgttgccgta aggctgcgct tgttcggggg catcaatatg
     3961 ttgtagcctt atttttagtg gtgttttatt gaccaaacaa gtgagggtgt cgccatcgct
     4021 aatgccaacg actttgcatt gtagttggcg ttcggcggca tataccgatg agaaaaataa
     4081 gctaaaaatc agggcgtaaa gatatttcat tattaaaaaa gagagggcta ataagccctc
     4141 attctatcat tttttattcg gctttacctg ttttaaggcg agcgaagaaa tcttttgttt
     4201 cactaataat cactttgcgt aacgcaatca atgcgattaa attcgggaat gccattaagc
     4261 cgttcacgat gtctgccagc gtccaaattg tatcgagttg taaaaatgga gcagaggcga
     4321 tgagtgcaat aaacagcaag cggtataatt taatgtattg ggtgcgacct cgagtgagat
     4381 agacaaaaca gcgttcaccg tagtagcacc agcctaaaat ggtggtaaag gcaaagaaga
     4441 ctaaaccaac tgtcacaatt atcgcaccga atgagctgtt taaaccttga gtaaaagcgg
     4501 ttgtggtgag ttctgcgcct tttacatcgc ctgcccaagc ccctgaaatc acaattacta
     4561 agccggtcat tgtgcagacg ataatagtgt ctaagaacgt gccggtcatt gaaattaggc
     4621 cttgacgtac cggctctttg gtttgggcgg cagcggcggc gatgggggca gagcctaatc
     4681 ctgattcatt cgagaaaata ccacgtgcaa cccctaattg aatcgcttgc atgacggtga
     4741 atccgactgc tccgcctaat gccgcttgtg ggttgaaagc tgcgtgtaca atagtaataa
     4801 ttgcttgtgg gactttttcc atattcagta gaatgacgga taaagcggcg atgacatacc
     4861 caatagccat aaacggtaca acaatggttg caattttaga aatccgctgc acgccaccta
     4921 aaataatagc ggtaacgata agggttaaaa tgatcgcact gaagataatc ggcacatcaa
     4981 aggtgctttc taaggcgtgg gtaatgccat tcacttgggg gaacgtgcca ataccaagca
     5041 aagcgaccaa tacgccaaaa aacgcaaagg ctttagcaag ccaacgccat ttttttccca
     5101 ttcccagttc gatatagtac atcggaccac cagccacaaa tccggctcta tctttagttc
     5161 gatatttaat tgccaataag ccttcggcat atttcgtagc cataccgaat aaggcaatca
     5221 gccacatcca aaataatgct ccaggcccgc ccgaatgaat agcggttgcc acgccgacaa
     5281 tattccccgt gccgatagta gctgctaggg cagtggaaag ggctgcaaaa gcggaaatat
     5341 cgcccgattg ccctttgcct ttttccggtt tgaacatata gcgaaaggct tgccctagtt
     5401 ggcttaattg aatacctttg agtgaaaagg ttaaatataa ccctacgcct gaaattaaaa
     5461 tcaggagtgg cgggccccaa acaaaactgt tgatttgatt aagaatagtg tcgatagaca
     5521 tttgatgttc ctcgtaaaaa ctgcttacaa ggaaagaaaa ggaatgcaag agacaagcgg
     5581 tcaaaaaacg gaaatttttt gcaaagaatt agcaaaaaaa caccgcttgt atcgtataac
     5641 ttttctcccc tgtccttttg cctgagcgtt tcacacattg ctgtattttc gccttcggcg
     5701 gcggatttta atccgctctc tccaagggtt cgtccagtaa cagtccccgc agtgttcact
     5761 gcacctgaaa gagtttacct cgtcggtgaa atgttaattc atttctctcc agctaccttc
     5821 atccgaacaa tctaatttat tttataatgt aaaataaaaa agatttgcca aattctagca
     5881 actcttttgc ttccgtcaag tgaatttaac gatatttttg ttctttcggt acttcttcta
     5941 aatcgctaaa taatacggca tatttttggg tggctttatt ggattctaat gccactttac
     6001 acgccatcgt aagtggaaca gaaagtaaca ttcctacggt gccaagtaac cacccccaaa
     6061 atagaagtga gaggaacact acaagggtag aaagcccgag tttcttgccc attaatttag
     6121 gttcaagcgc attacccaca accatattaa tcacgacaat gccgattaaa gtgcctaatc
     6181 ctatagaaaa gccattgagt accaaggctt gaatcacaat tggaattccc gccaaaatag
     6241 agccgatatt cgggacgtag ttaagcagga aggttagaat tgcccataaa atcgcatatt
     6301 ctacgcctag aatttctagt aagatccaaa ctaaccctcc ggtgagtagg ctcacaaagg
     6361 ttttaactcc aaggtaacca atcacccctt caagtacttg gttgatatac tctttttcgt
     6421 tgcttaaatc atcatctggg ctaagtgcga gggctaattt atatttggca accggcattt
     6481 ccaatagcat aaaaatgacg actaagaaaa tcacaaaaat attcgataat gcaccggata
     6541 gccccattag cagtttgctg accaaattca ttattgagct tgggtcaaat ttgctcataa
     6601 tctcttcttg tgagagggta agtggaatat gccatctatg ggcgagttct agaatcacct
     6661 ggattctaga tgaaagctga attttgtatt gcggaatagc attagtaaat tcttgcaagg
     6721 tgttattaat aatgcctgct aagaaactga atcctaagat aaaaacaata agtaaaatgg
     6781 taatggctaa ccataatggc actttacgct tagtcataaa tttgatcatt ggtgaacaaa
     6841 taatggcaat aaatagcgaa agtaaaaatg gcacaacaat ttcattggat aatttaatcc
     6901 ctgccagaat aatgataatg gaggctatcg ccacgagagt tttggtggaa tgtgtcataa
     6961 tttttccttt tacaagcggt taaaaatcag caatttttta caaattagtg attctcaaac
     7021 caactttcta aaattaaaca agcggaaatg gaatccactt tatccttttt taatgctttg
     7081 taaccaccac gagaaaaaat ttccgctttt gcttcaacag tagtgaggcg ttcatcttgt
     7141 agctcaaccg gcagattaaa gcgtccgttt aagcgattgg caaattttct ggcacgctga
     7201 gttaaaggct gctctgtgcc gtccatattc aagggtagcc caacaaccag catatctggt
     7261 ttccaatctt gcaagagttt tccgatctct tcccagtttg gaataccgtc ttgggcttta
     7321 aatgtagtta aaccttgagc tgtgccggta atactttgtc caactgcaca gccgatgcta
     7381 tttgtgccaa aatcaaaggc aatcacggtt tttgttgtgg tttctgtcat taagctctcc
     7441 cagctcttga cggtatgctt gaaagcccca tcatttcata ggcttctgcc caacgctcta
     7501 aataaccggt ttcaaacagc gttttttcat tcgcatcaga cacaatccaa taattttgag
     7561 caatttcttg ctcaagctgg ctgccacgcc aagtggaaca acctaaacac acaataaatt
     7621 tttcaggtga agccagtgtg ccaaaggagt ctaacacatc accggaggta gtgagcgtaa
     7681 ttttatcggt gatcggataa gtgtgaataa aatcattggc ggttttggtg tgaataataa
     7741 agccacgatc ttgatttacc ggcccaccgc ttaacaccat ttggtctttt ttgtaatcac
     7801 gctggttcgc catttggaaa tccattcggg taatcagctc tagaaccgac agatcggtag
     7861 gagtgttaat tactactccc attgcacctt gcggattatg ttcgcaaata tagaccaccg
     7921 tacgctcgaa atagtcatcg tccatttccg gcgtggcaat taaaaattta ccttgtaaat
     7981 tctctaacat taaatatctc caaaacaaac ttgtaacgca gtaattgccg caagtgaggc
     8041 ggtttctgtg cgtaacactc gtttacccag taatacttca gtaaaacctt cgctctcggt
     8101 catggcgatt tcttcggcag ataatccgcc ctcagagcca atcagtaaac gaacaccagc
     8161 tttcggcaca ttcggcagtt cacgaatggt atatttggct cttgggtgca aattcagttt
     8221 caacatatcg tcttgttctt tgcaccagtc ggtgagtttc ataatcgggc gaatttcagg
     8281 gatttcattt cgtccgcatt gttcacaggc ggcaatcgca attttctgcc attgctgtaa
     8341 ttttttatct tgccgttcat cattgagttt cacgccacaa cgttccgacc aaagtggggt
     8401 aatagttttt acccccagct ccaccgattt ttgaatggta aattccattc tatcgcctcg
     8461 ggaaatcact tgccctaaat ggatcggcag gttggattct cggtcatcta attcacttga
     8521 atcaattttt gcaataattt gctttttttc gaccgcttgt aacgtagcgt ggaaaacgtg
     8581 gtttgaacca tcaaataaaa tgatttgctc tccttgtttc attcgtagca ctcgcccaac
     8641 gtggttagcg gcatcttcac ttaacacgca actttgaaga ccagctaacg gctgtggttg
     8701 gtaaattctt gggattctca taattatcta gttataaatt aaaggcagac gattgtctgc
     8761 cataggtaag ttaaaacggg ttaaggataa agtcttgaac aatgcacaat agtaataatc
     8821 gaaatttcat tctctttaac ttcacacact attctatagc cgttatgata tagttctctc
     8881 gtattaataa ttgcaccttt tacacccatt gtaggaaaaa tggctaaatt attaatacta
     8941 ttttccaatt cttctagtat cctaattcca ctacttgcat aaccggtaaa ttcactaact
     9001 gagatggcaa tattctctaa atctattaag gcctcttcag tataataaat attatgcaac
     9061 ttttttggca ttttcagcac ctctaaaagc ggcagcaata actctttttc tgacctcttc
     9121 gggtgaataa atccgaccgt ttttaatatc ttcctttcct tgctttactt ttttagcaag
     9181 ataatcaaga tattcttggc taacattatg ataaggatta ttcatatttt tcctccctgc
     9241 gatgagtctc tattgtgggg gctactgatc gtttaatcaa gttaatttat cttatttttc
     9301 gagccacatc acaaaacgag aaaacaacaa gcggtcattt ttccacgttt tttgcaaaaa
     9361 atcgaagaaa gatgaccgct tgccagaaaa aattaattat ttgaactggt gaattgcatt
     9421 ggcgatttca ttatcgttgt aaatagcttt caccacatca gaataggctt ggtctaacac
     9481 tttcttgatt tcatcattgc ttgcaccaaa tgcaccttcg taaccacggg tagcgttgaa
     9541 gtttttgcta aagtttcctt tagaaccttg cactgccact tttacactca cttgtgcatc
     9601 ggctttgtag cgtaagtttc cttgttctac tgtggcaaag aatttacgaa tattcactac
     9661 cacattggca ttcgctgcac cttgtacaat ttggaaacct tttgcattca ggtcttgttg
     9721 gacggcttgt tggaacattg cagcaacttc aggcactgcg gttaaacgaa tgacctctcc
     9781 gtttttagtg tagcttgcga tttcacgcga ggtgcgtaaa tcttgtgtca ttacattcac
     9841 cgcagccgtt tgattgtttg tgttaaatac agcagttggc gttggggtag agaatgttaa
     9901 tgtgttggat tggctttggc agccggctag taatgcggca acaaaagtag tggctaacac
     9961 taacgttttt ttagagcgtt tcatagtaaa tccttctata ttgaataaat ttcgagaaaa
    10021 tttctgctta gtatagtatt atttcgtttt gattttcaat gaacgagagc aaaaaatgtc
    10081 ggtagaacag acaattattc aaaaaattaa gacagaattt cagccgattt tctttaatgt
    10141 cgaaaacgaa agctatatgc acagctcagg tagaggagca gaatcgcatt ttaaattaac
    10201 tttggtgtca gataaatttg aagggcagag aacagttgca cgtcatcgtg ctgtctatgc
    10261 ttgcttagct gaggaattag ctaatggcgt tcacgcactt gctttgcacc tatataccca
    10321 aggtgaatgg gaagcgactg gcggacttgt acctaaatcg ctaaattgct taggtgttgg
    10381 gcaataagtg gataaaaatg atttatttta ttttgtgaag aaaatacttg aaagagccgt
    10441 gtaaaattgc tatatttacg ccatcttttt gttgattcgg tgagatgtcc gagtggttga
    10501 aggagcacgc ctggaaagcg tgtatatggg aaactgtatc gggggttcga atccccctct
    10561 caccgccatt catactgaaa gattccttac tgttttcata gatatttcct tggttaagtt
    10621 aaagtagata atactttttc atttttaggt tatccccgag caaacattgc ttgggggttt
    10681 ttttatgcga tcggcgatag attacaaaga aaaaggattc ctaagaatcc tttttatctg
    10741 cttttaacgt actttaccta gtttatagtt attgctgttt tttaccgtgt tgccatttgg
    10801 gtcgcaaagt tcaacgtgtt gttcagacac ttggaaggca agattgcctg atgctttttc
    10861 cagacgaatc acatttggct tattgggttc ccaactgtat gtgcctttgt ctcggtaagt
    10921 gtattctttt ttatctttaa aatataccgt atcatattgg taggttttat ctgcatttaa
    10981 ggttagctgg gcttggattt tctcacagtc agcacacggt aattcacctg cataagtacc
    11041 gctaacgctt ttttgtggta gcaatgagca agcccctagc attgcggtgg taaaaccaat
    11101 gagtgcgatt tttttcatac tattttcctc ttcaaaatta aattatgtaa cactcggatt
    11161 tactctaaat tcaagttggg ttatttcagg taaatcggtt tgtatctgtt ttagtaacat
    11221 attttgttgc aagattaaac cttgccgtac ggttgcattc ttaacgctca caataagctg
    11281 attatcaact aaattcacta ctcggtaaag cccacgataa gattctggcc atcttttctg
    11341 aattttttgg tttaaatcgt taatgaagtt tgctttttcg acaatacggc ttaagcttga
    11401 gttctgtaaa atgtcattaa tctttttagg tgctgaattt ttcatctgtt tctttacatt
    11461 tcgtcttatt ttaggcttga ttttacgata cttgacccaa taatttactc attcggcttt
    11521 actttagcgt ataattagcc caattttttc atttatctta atttaatgag cttattttta
    11581 aaacactttc atcgaacgcc tttttggtcg caactctttt tgggaatggt tgcgatactt
    11641 gctttacctg aaattcaggt tgcgtacgcc aatgaaagtg aacaggaaac cgttcttaat
    11701 caatcttttc ttcaatatgc tcaatccgct aatgatattg agcaacaatc gctttttatt
    11761 gcagagttaa tccataaaat tgtggaaatt aaaccacaag cggtgcattt ttgcgaattt
    11821 tttgcaaact cctaccgctt ggatagacaa aatgcttacc ccattcgagc cgggccacaa
    11881 acctaaatat aatttaatt
//
LOCUS       DANMCL010000087        11880 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.087, whole genome shotgun sequence.
ACCESSION   DANMCL010000087 DANMCL010000000
VERSION     DANMCL010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11880
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.087"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(198..2159)
                     /gene="recD"
                     /locus_tag="PXF40_002156"
     CDS             complement(198..2159)
                     /gene="recD"
                     /locus_tag="PXF40_002156"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HDL5803453.1"
                     /translation="MLNLLLELKQEKAISDLNYQFARFIDNKQKPYGYSPLEQDLAVL
                     AAALVSYQVGLGHTALRLENLSLSSLFELNSKPQTYHLLEQILQKIEQIPPLEWQSVL
                     KNHIAFSYSPETIKPMLFQNSLLYFYRYWQAEHRIAGYLQQAVDFSEKFANTELNQSI
                     LNQLFTGKAQTIDWQKIAVATALEKQFSLISGGPGTGKTTTVVKLLLGLQLKQQALQK
                     PYLQIALAAPTGKAAARMKESLESKLAEEKGLSEELKRSIPTEAVTIHRLLGARPLTE
                     KTKYHTKNPWHYDLVVLDEASMIDLSMMEKVVQALKPNSRLIMLGDKDQLASVEAGSI
                     MGELGSFIDNGYSQSHCDYLKAVTDYQIEAGNALPIGDCLSHLKHSYRFGEKAWIGEL
                     ANAVNDQKINLSWEIFDKYKNSDKLENFCYPETKETTDKSSWIEKSVQMVVDKAVELY
                     RDYLQAVQKREKNPDSVSVKAIFEKFQKVRILSALRVSELGVERLNMAIAEGLRKASL
                     VKFNHSRDRYIGKPILMTENMPINSIASGDVGIILPDENGESRVYFDSLQENREHHSL
                     PLGRVSNYEAAYIMTVHKSQGSEFEHTVLVLPHSISPVLTKELIYTAITRAKDKFTLF
                     GSEKVWKYSVGAKTERQSGLKEQIRGKFS"
     gene            2289..3413
                     /gene="alr"
                     /locus_tag="PXF40_002157"
     CDS             2289..3413
                     /gene="alr"
                     /locus_tag="PXF40_002157"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HDL5803454.1"
                     /translation="MKPATATIDSQALRHNIRLIKSFAPQQKLLAMIKANAYGQGLLP
                     AAGTLADMVDGFGVARLREALEIQETGYTGKIVLVEGFFDREELLKTLSRKFDTVIHN
                     LEQLELLEQVAKEWQAEQQKGFWTRKAKIYFPINIWLKIDTGMHRLGIHPEQVDHFVE
                     RLKNCALVNSISFVSHFSRADELDCGYTEKQIAVFEQATQKYQDHDRSISASSGILYW
                     KQAHYDWVRPGIIMHGISPHYTPITDLGFKPVMTLSSSLIAVRTHKAGEPVGYGGAWV
                     SPKDTKLGVTAMGYGDGYPRNAPEGTPVLINGRIVPIVGRVSMDMLTVDLGAESQDKV
                     GDKAIFWGEQLLIEDVAKHIGVISYELITKLTPRVIFEYK"
     gene            complement(3476..4117)
                     /gene="sodA"
                     /locus_tag="PXF40_002158"
     CDS             complement(3476..4117)
                     /gene="sodA"
                     /locus_tag="PXF40_002158"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005708524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HDL5803455.1"
                     /translation="MAYTLPELGYAYDALEPHFDAKTMEIHHSKHHQAYINNANAALE
                     AHPELLEKCPGALIKDLSQVPAEKRIAVRNNVGGHVNHTLFWKGLKTGTTLQGALKEA
                     IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLEEGKLAVVSTANQDNPLMGKEVAGVS
                     GYPILVLDVWEHAYYLNYQNRRPDFIKAFWNVVNWDEAARRFEEKVATCGCAK"
     gene            4561..7017
                     /gene="thrA"
                     /locus_tag="PXF40_002159"
     CDS             4561..7017
                     /gene="thrA"
                     /locus_tag="PXF40_002159"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HDL5803456.1"
                     /translation="MRVLKFGGTSLANPERFMQAAEIIEKAHLADQAAGVLSAPAKIT
                     NHLVAIVDKAIAGESFQSNLSEATEIFHNIINGLYATNNHFAKEALLALVEAELNQIQ
                     QVAAEAAQTKSLSDKIAATIHCRGEKLSIAMMQAWFEAKGYEVTRIDPVEKLLAHGSY
                     LESSVDIAESTKRVDAGSIPKKNIVLMAGFTAGNEQGELVLLGRNGSDYSAACLAACL
                     KADVCEIWTDVDGVYTCDPRLVPDAVCLETMSYQEAMELSYFGAKVIHPRTIGPLVPL
                     NIPCLIKNTGNPDGKGTLIDGNVANDNLKVKGITNLDNVAMFNVSGSGMQGMVGMAAR
                     VFSTMSKAGISVILITQSSSEYSISFCVPAKSAEKALAALNTEFAQELSENLLDPIDI
                     IKDLSIVSVVGDGMRTAKGIAARFFSALAQANISIVAIAQGSSERSISAVVPLNKAIE
                     AVKATHKSLFNSKRVVDMFLVGVGGVGSELIEQVKQQKEFLAKKDIEIRVCALANSDK
                     MLLNENGLNLDNWKEDLEKAIQPSDFDVLLSFIKFHHVVNPVFVDCTSAQSVANLYAR
                     ALKEGFHVVTPNKKANTSGYDYYLEMRENARQSQHKFLYETNVGAGLPVIENLQNLLA
                     AGDEVEKFEGILSGSLSFIFGKLEEGLTLSQATLIAKEKGFTEPDPRDDLSGADVARK
                     LLILVRETGLPLEFEDIEIEGVLPKGFSEGMSRDEFLQALPSLDEEFSKRVEAAKAEG
                     KVLRYVGSITGDKCRVAIEAVDENHPLYKVKDGENALAFLTRYYNPIPLLLRGYGAGN
                     SVTAAGIFADILRTLQGGVN"
     gene            7017..7964
                     /gene="thrB"
                     /locus_tag="PXF40_002160"
     CDS             7017..7964
                     /gene="thrB"
                     /locus_tag="PXF40_002160"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HDL5803457.1"
                     /translation="MALRIYAPASSANISVGFDSLGAAISPIDGSLLGDVVQIEESEQ
                     QFELESAGYFVRKLPKEPQKNIVYQAYVLFSERLKLRNGSVKNLRLTLEKNMPIGSGL
                     GSSACSIVAALVALNKFHDEPFSKMELLEMMGELEGRISGSIHYDNVAPCYLGGLQLM
                     TQSLGNICQPLPFFDEWYWVLAYPGVEVSTAEARAILPKSYTRQDMIQQARYLGSFVH
                     ACHTHQDILAATMMKDLIAEPYREDLLPNFPAVRQGCKDLGALAVGISGSGPTMFAIA
                     PDLEHAQRLVSYLEKEYLQNNEGFIHICKVDNQGARELK"
     gene            complement(8079..9455)
                     /gene="cysS"
                     /locus_tag="PXF40_002161"
     CDS             complement(8079..9455)
                     /gene="cysS"
                     /locus_tag="PXF40_002161"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HDL5803458.1"
                     /translation="MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTF
                     VSFDVIARYLRYSGYNLRYVRNITDVDDKIIKRALENNETCDELVDRMIAEMHKDFDA
                     LNILRPDVEPRATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNL
                     EQLQAGARVEIKSIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELG
                     EHFDIHGGGSDLMFPHHENEIAQSCCAHGGDYVNYWLHTGMLTIDKEKMSKSLGNFFS
                     IRHMLGLYDAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIG
                     EHYVEAFKTAMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGL
                     LEQDPDAFLKGDANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTP
                     NGTIWRKA"
     gene            9611..10120
                     /locus_tag="PXF40_002162"
     CDS             9611..10120
                     /locus_tag="PXF40_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HDL5803459.1"
                     /translation="MITLHTNFGDIKIELNFEKAPITAKNFEDYAKEGFYNGTIFHRV
                     IDGFMIQGGGMTAGMAEKPTKDPIQNEANNGLSNKRGTIAMARTSDPHSASSQFFINV
                     ADNTFLDYRSKEMFGRSVVQDWGYAVFGEVVEGMDVVDKIKGVKTGNKGFHQDVPVED
                     VVIESVSVA"
     gene            complement(10212..11141)
                     /locus_tag="PXF40_002163"
     CDS             complement(10212..11141)
                     /locus_tag="PXF40_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005601223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HDL5803460.1"
                     /translation="MEIALLLADKILQLTLMVLLGYLIVKTKLLKSEHSYPISVIGLY
                     IISPAMLITAFQVDYTTEILNGLYLAFLISVLLNGLLILLGWLLKRALKLDNIEQATA
                     IYSNSGNLIIPIVASLFGNEWVIYSTAFIVVQNVLFWSHLRLLICGKGNVPFRKMIFN
                     INIIAIVIGMMLFLLHIKLPATLANTLSTLGHMLGPLAMLVAGMLIAAIPFKEIITDK
                     RIYLVAFLRLIFIPLILLAVIKLGGFASWIENGKTVVMITFLATISPSAATATQMAVA
                     YGQDAKKASAIYGVTTLLCVFTMPLIIWLYQFL"
     gene            complement(11144..11863)
                     /gene="fdhD"
                     /locus_tag="PXF40_002164"
     CDS             complement(11144..11863)
                     /gene="fdhD"
                     /locus_tag="PXF40_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HDL5803461.1"
                     /translation="MPVALVYNGISHTVMMATPANLEDFALGFSLAEGILNAPSELYG
                     LDVIEQENGVEIQLEISSRQFVALKDKRRSMAGRTGCGICGVEQLEQVNQSCKIVKKN
                     NRLQNVNPLILEDCLLQLENAQFLSKETGASHAAAFFTPDGKLLAIREDVGRHVALDK
                     LIGWYAKADFPIGFVFVTSRASFEMVQKCLAVGIEMLCAISATTEMAVNMARENQFTL
                     LAFARKGKATIYAGEERLALN"
BASE COUNT         3463 a         2533 c         2426 g         3458 t
ORIGIN      
        1 gcccacacag attgtctgat aaattgttaa agaacaaaaa gaaacgacgc actggaaatc
       61 aattttaaat cgttcacaac agtgcgtcgt tgtgtgctgc gtattatagg gaaaaacaaa
      121 aacaacgcaa gcggtttttg taaaaaattt gaaaaaaatg accgcttgcg tatttttacg
      181 gcaaaacgag tattaattta gctaaacttg cctcttattt gttcttttag cccactttgt
      241 ctttcggttt tggcaccaac actgtatttc caaacttttt cgctaccaaa taaggtaaat
      301 ttatcttttg cccttgtgat tgcggtgtaa atcaactctt tcgtcagcac cggggaaatc
      361 gaatggggca acaccaatac cgtatgttca aattcagaac cttgcgattt atgcacagtc
      421 ataatataag ctgcttcata atttgaaacc ctacctagag gcaaactatg gtgttctcta
      481 ttttcctgta aggaatcaaa ataaactcgg ctttctccat tttcgtccgg caaaatgatg
      541 ccgacatcac cgctggctat gctatttatc ggcatatttt ctgtcattaa aatcggtttt
      601 ccgatatagc ggtctcggct atgattaaat ttcactaagc tagctttccg caagccttcc
      661 gcaatcgcca tattaagacg ttcaaccccc agttcactta cccttaaggc tgataaaatt
      721 cggacttttt gaaatttctc aaaaatcgct ttcacactca ctgaatctgg atttttctcc
      781 cgtttttgaa ccgcttgtaa ataatcacga taaagttcaa ccgctttatc caccaccatt
      841 tgcacacttt tttcaatcca gcttgattta tccgttgtct ctttcgtttc cggataacag
      901 aaattttcta acttatcact gtttttatat ttgtcgaaaa tctcccacga aaggttaatt
      961 ttttgatcat ttactgcatt tgcaagctct ccaatccagg ctttttcgcc aaatcgatag
     1021 ctatgtttta agtgagataa acaatcacca atcggcaacg cattaccggc ttcaatttgg
     1081 tagtcggtaa cggcttttaa gtaatcgcaa tgggattggc tataaccatt atcaataaaa
     1141 gagccaagtt cccccataat tgaaccagct tccacagaag caagctgatc tttatctccc
     1201 agcattatca agcgagagtt tggtttgagc gcttgaacaa ctttctccat cattgataaa
     1261 tcaatcattg aagcctcatc taatacgacc aaatcatagt gccacggatt tttggtatga
     1321 tatttggttt tctcagttaa tggtctcgca ccaagcaagc gatgaatagt cactgcttca
     1381 gttggaatag agcgttttaa ctcctcagat aacccctttt cttccgccaa cttgctttcc
     1441 agcgactctt tcattcttgc tgctgctttt ccggttggtg cagccagagc gatttgcaaa
     1501 tatggtttct gtagtgcttg ctgttttaat tgcagcccga gtaataattt tactaccgta
     1561 gttgtttttc cggttcccgg cccacctgaa attaagctaa actgcttttc taatgctgtt
     1621 gcaacggcaa tcttttgcca gtcgatagtt tgagctttcc cagtgaatag ttggttgaga
     1681 atgctttggt ttaattcggt atttgcaaat ttttccgaaa aatcaaccgc ttgttgtaaa
     1741 taaccggcaa tgcgatgctc cgcttgccag tagcgataaa aatagagcaa gctgttttgg
     1801 aataacatcg gtttaattgt ttcgggagaa tagctaaaag cgatatgatt tttcagcaca
     1861 ctctgccatt caagcggtgg aatttgctca attttttgca aaatttgttc gagcaaatga
     1921 taagtttgtg gcttgctatt taattcaaaa agagaagaaa gactgagatt ttccaaacgt
     1981 aatgccgtat gcccaagtcc cacttggtaa gaaaccaacg cagcggctaa cacagctaaa
     2041 tcttgctcca aaggcgaata cccatagggt ttctgcttat tatcaataaa acgggcaaat
     2101 tgataattta agtcagaaat cgccttttct tgtttaagtt ccaataataa attcagcata
     2161 atcaaacctt aaatcgacca cctaacatta agtgataata ctaatctttt ttgcattatt
     2221 ttctaaggga ttttttattt taggcgtata atttagcctt tcttgtgatt ttaactatgt
     2281 agataagtat gaaaccagca acagcaacca ttgatagtca agccctccgc cataatattc
     2341 gcctgatcaa atctttcgct ccacagcaaa aattattggc gatgatcaaa gccaatgctt
     2401 acgggcaagg cttattgccg gctgccggca cattagcaga tatggttgat ggctttggag
     2461 ttgcccgttt gcgtgaagcc ttagaaattc aagaaaccgg atacacaggc aaaattgtgt
     2521 tagttgaagg tttttttgac cgagaagagc tactcaaaac cctttcccgc aagtttgata
     2581 ccgtcattca taacctcgaa caactggaat tactcgagca agtagcaaaa gaatggcagg
     2641 cagagcaaca aaaaggcttt tggactcgta aagcgaaaat ctacttcccg attaacattt
     2701 ggctaaaaat cgacaccgga atgcaccgct taggcattca cccggagcaa gtcgatcact
     2761 ttgttgaacg tttgaaaaat tgtgccttgg tcaattcaat cagctttgtg agtcatttta
     2821 gccgtgccga tgaactcgat tgtggctata ccgaaaaaca aattgcggtg tttgagcaag
     2881 ctacgcaaaa atatcaggat cacgaccgca gtatttccgc ctcaagcggt attctttatt
     2941 ggaaacaggc tcattatgat tgggttcgcc cgggtattat tatgcacggc atttctcccc
     3001 actatacgcc gattaccgat ttaggtttta agccggtaat gacgctctcc tcttccctga
     3061 tcgctgtgcg tacccataaa gccggcgagc ctgtaggcta tggtggtgct tgggtaagcc
     3121 ctaaagatac caaactcggc gtgactgcaa tgggctacgg cgatggctac cctcgcaatg
     3181 ctcctgaagg tacccctgtg ttgattaacg gtagaatagt gccgattgtc ggtcgagttt
     3241 cgatggatat gctgacggtc gatttaggtg cagagagcca agataaagtg ggcgataaag
     3301 ccattttttg gggagagcaa ctattaattg aagatgtggc gaaacacatt ggcgtgatta
     3361 gctatgagct gattactaaa ctcactcctc gtgtgatttt tgaatataaa tagacaacaa
     3421 gcggtaaaat tttcaacaaa ttttaccgct tgtatcttat tcaagatcga aaatattatt
     3481 tcgcacaacc gcaggttgct actttttctt caaaacggcg agcggcttcg tcccagttta
     3541 caacgttcca gaatgcttta atgaaatccg gacggcggtt ttggtagttt aagtagtaag
     3601 cgtgttccca aacgtctaag actaaaatcg gatagcctga aacgcctgcc acttctttac
     3661 ccattagtgg gttgtcctgg ttagcggttg aaacaacggc taatttaccc tcttctaata
     3721 ctaaccacgc ccagcctgaa ccaacacgag tagtcgctgc tttttcaaat tctgattgga
     3781 aagcttcaac tgaaccgaaa tcacgctcaa tcgcttcttt taatgcacct tgtaaggtag
     3841 tgcctgtttt taaacctttc cagaataaag tgtggtttac atgaccacct acgttgttac
     3901 gcactgcaat acgtttttct gcaggcactt ggctcaaatc tttgattaat gcacccggac
     3961 atttttctaa taattcaggg tgagcttcta atgctgcatt tgcattgttg atgtaagctt
     4021 ggtgatgttt agaatggtgg atttccattg ttttagcatc gaaatgtggc tctaacgcat
     4081 cataagcgta gcctaattct ggtaatgtat atgccatagt taattcctct caaatagtaa
     4141 ataggttaat cagagttaaa ctccgagtac attttatcaa gaaacacaca aaaaatgcac
     4201 atttttttga tctagaacaa aattatttca ctatctaatt tagaaaggtt cctaatcaaa
     4261 ttcttgcttt taattgtttt atatagaaag acaaagaaat ttaaaaaaat gtggtgaaaa
     4321 acagcgttaa gcccattgac aaaggcatta ttttcacgca ttcttgaacc attattcact
     4381 ctcttgaccg agattccgcc aatgaattgt tttaatatga tgacaacgat tattaccacc
     4441 attatgtcac caacatagtg cgggttttaa ttggctgaaa taatgaaaga ataaaccgaa
     4501 aacccgctac aagcgggttt ttttgtataa aaatttacaa ataatttatc aggagtaact
     4561 atgcgagttc ttaaatttgg aggcacttct cttgccaacc ctgaacgctt tatgcaagcg
     4621 gcagagatta tcgagaaagc tcatttggca gatcaagctg ccggcgtatt atccgcccca
     4681 gccaaaatta ccaatcatct tgtcgctatt gtagataaag cgattgccgg tgaatcattt
     4741 caatctaacc tttctgaagc taccgagatt ttccacaaca tcattaacgg cttatatgct
     4801 acaaataatc actttgctaa agaagcactg ttagccttag tggaagcgga attaaaccaa
     4861 attcagcaag tggctgcaga agcagctcaa actaaatcgt tgtcagataa aattgctgcc
     4921 actattcact gccgtggtga aaaactctct attgcgatga tgcaagcgtg gttcgaggca
     4981 aaaggctatg aagtcactcg tatcgaccct gttgaaaaat tattggctca cggcagctat
     5041 ttggaatctt cggtcgatat tgccgaatcc accaagcgag ttgatgcagg ttcaattcca
     5101 aagaaaaata tcgtgctaat ggctggtttt accgcaggta atgagcaagg cgaactggtg
     5161 ttattagggc gtaacggttc agattattct gccgcttgtt tggcagcgtg tttaaaagcc
     5221 gatgtttgtg aaatctggac ggacgtagat ggcgtttaca cctgcgaccc tcgtttggtg
     5281 cctgatgcag tatgcttaga aacaatgagc tatcaagagg caatggagct ttcctacttt
     5341 ggggcgaaag tgatccaccc tcgcaccatc gggccattag tgccgctcaa tattccttgt
     5401 ttaatcaaaa ataccggcaa tccggacgga aaaggcacat taattgatgg caatgtggca
     5461 aacgataatc tcaaagtaaa agggattacc aaccttgata acgtggcgat gttcaacgtt
     5521 tcaggttcag gaatgcaggg aatggtgggc atggctgccc gtgtgttctc gacgatgtca
     5581 aaagccggta tttcggtgat tttaattacc caatcatcat cagaatatag catcagcttc
     5641 tgcgtgccgg caaaatcggc agaaaaagcg ttagcggctc taaatactga atttgcacaa
     5701 gagttatctg aaaacttact tgacccgatt gatattatta aagatttatc cattgtttcg
     5761 gtagtgggtg atggtatgcg taccgccaaa ggaattgcgg ctcgcttctt ctctgcccta
     5821 gcccaagcca acatcagtat tgtggcaatt gcacagggtt catctgagcg ttccatttct
     5881 gctgtcgtgc cgttaaacaa agcgattgaa gcagtaaaag caactcacaa atcgctattt
     5941 aacagtaaac gtgtggtgga tatgttttta gtgggtgtag gcggtgtggg tagcgaactc
     6001 atcgagcaag tcaaacaaca aaaggagttt ttggcaaaga aggatattga gatccgtgtg
     6061 tgtgctttag ctaattcaga taaaatgtta ctcaacgaaa acggcttaaa tttagacaac
     6121 tggaaagaag atttagaaaa agcaattcag ccgtcagact ttgatgtatt gctttctttc
     6181 atcaaattcc accacgtggt aaacccagta tttgtagatt gcacttcggc acaatcggtg
     6241 gcgaacctgt acgcacgagc cttaaaagag ggcttccacg tggtaacacc aaacaaaaaa
     6301 gccaatacat caggttacga ttactactta gaaatgcgtg aaaacgcccg ccaaagccag
     6361 cacaaattcc tctacgaaac taatgtaggg gcaggtttac cggtaattga aaacttacaa
     6421 aacctattag ctgccggtga cgaagtagag aaatttgaag ggattttatc cggctcgctc
     6481 tctttcattt tcggcaaatt agaagaaggt ttaacccttt cgcaagcaac tttaatcgcc
     6541 aaagaaaaag gctttaccga gccagatcca cgagatgatt tatccggtgc agatgttgct
     6601 cgtaaactct taattcttgt tcgtgaaacc ggcttaccgc ttgaatttga agatattgaa
     6661 attgaaggcg tattgccaaa aggcttctcg gaaggaatga gtcgtgatga gtttttacaa
     6721 gctctaccgt ctttagacga agaattcagc aagcgtgtag aagctgccaa ggctgaaggc
     6781 aaagtgttgc gttatgtggg ctcgatcaca ggtgataaat gccgagttgc cattgaagcc
     6841 gtggacgaaa accacccact ttacaaagtt aaagacggcg aaaatgccct tgcttttctc
     6901 acacgttact acaaccctat tccattatta ttgcgtgggt atggtgcggg caatagcgta
     6961 accgctgccg gtatctttgc agatattctg cgtactttac aaggaggagt gaactaatgg
     7021 cgttacgaat ttatgcccca gcttcaagtg caaatattag tgtgggtttt gactcattag
     7081 gcgctgcaat ctccccgatt gacggctctt tgctcggcga tgtagttcaa attgaagaga
     7141 gtgaacaaca atttgagcta gaaagtgcag gttattttgt acgtaaattg cccaaagaac
     7201 cacaaaaaaa cattgtctat caagcctatg tgctatttag cgaacgcttg aaattacgta
     7261 acggcagtgt aaaaaattta cgcttaacac ttgaaaaaaa tatgccgatt ggctcagggc
     7321 taggctcaag tgcctgctcg attgttgcag cattagtggc actcaataaa ttccacgatg
     7381 aaccgttctc caaaatggaa ttactggaaa tgatgggcga attggaaggc agaatttcag
     7441 gctcaatcca ctacgacaac gttgcccctt gctatttagg tggcctgcaa ttaatgacac
     7501 aatcgctcgg caatatttgc caacctctgc cattctttga tgaatggtat tgggtgcttg
     7561 cctacccggg cgtggaagta tcaaccgccg aagcccgtgc tattttgccg aaaagctata
     7621 ctcgtcaaga tatgattcag caagcccgct acttaggatc tttcgtccat gcttgccata
     7681 cacatcaaga tatcttggct gctacaatga tgaaagacct aattgctgag ccttaccgtg
     7741 aagatttact gccgaacttt ccggctgttc gtcaaggctg taaagactta ggtgcgttag
     7801 cggttggtat ttcaggttcc ggtccgacaa tgtttgcgat agcccctgat ctcgaacacg
     7861 ctcaacgttt agtgagctat ttagagaaag aatatctgca aaacaacgaa ggctttattc
     7921 atatctgtaa agtcgataat caaggagcaa gagagctgaa atagccctct cgaacaacca
     7981 tatcactaaa taacttaaag gactgactcc aataccactt ggagcagccc tttttgatta
     8041 attttttgaa aagtctatca cttataaaca atcgaaggct atgccttacg ccaaattgtg
     8101 ccgtttgggg tgtcttcgag gacaatattt atcgctttga gcttatctcg cacttcatcg
     8161 gcaaccgccc agtttttagc cgctttggct tcgttgcgtt gtttgattaa ggcttcgatt
     8221 tctgccgttt catcgtcatt cgcatcacct tttaaaaacg catcggggtc ttgttccagt
     8281 aagcctagca cgccggctaa ctcttttaaa cgaacggcta aaccgttggc ttttgccata
     8341 tcttcggttt tgagtttgtt caactcacgg gcaatttcaa ataacaccgc taatgccccc
     8401 ggggtgttga aatcatcgtc cattgcggtt ttaaaggctt ctacatagtg ttctccgatg
     8461 gcttcgcccg acacatcaca accacgcaga gcggtatata aacgctcaag agccgaacgg
     8521 gctaaatcaa ggttgtcaat gctgtaatct aataacgaac ggtaatgagc ggttaagaag
     8581 aaataacgta acgattcggc atcgtataag cctaacatat ggcgaatgct gaagaaattg
     8641 cccaaagatt tcgacatttt ttctttatca atggtaagca ttccagtgtg taaccaataa
     8701 ttgacataat cgccaccgtg agcacagcaa gattgtgcaa tttcgttttc gtgatgcggg
     8761 aacattaaat ccgagccacc gccgtgaata tcaaaatgtt cgcccaactc tttgctattc
     8821 attgccgaac attcaatatg ccagcccggt ctgccattgc cccacgggct ttcccagctt
     8881 ggctcaccgg ctttcgacat tttccacaag acaaaatcca tcgggttttt cttgatggat
     8941 ttaatttcaa cccttgcacc ggcttgtagt tgctctaaat tttggcggga taatgcacca
     9001 tatttctgga acgattccac atcaaacatc acatcgccat cggctgcgac ataagcgtgt
     9061 ccgttgtgaa tcagtttttc taccatcgca ataatttcag gaatatgctt ggtggctcgt
     9121 ggctcaacgt ccgggcgaag aatgtttaac gcatcaaaat ctttgtgcat ttcagcaatc
     9181 attctatcca ctaattcatc gcaagtttcg ttattttcta acgcacgttt gatgattttg
     9241 tcgtccacat cggtaatgtt acgcacatag cgtaaattgt agcctgaata acgtaaataa
     9301 cgggcaatca catcgaaaga gacaaaagtg cgaccgtgcc caaaatgaca aagatcgtaa
     9361 accgtgacgc cacagacgta cattcccacc tgatttgggt taatcggttt aaattcttct
     9421 ttttcacgtt ttaaggtgtt ataaattttg agcataaagt cctcttgtgt aacattcagt
     9481 aacaaatggg gctaagtata gcgaataagc ggtctgattt tgagattttt ttgcaatttg
     9541 gcgtaaactt tttaataata gcgagcgaaa tttattttcc attccatttt tatttataaa
     9601 ggaacaaaga atgattacat tacataccaa tttcggtgac attaaaatcg aattaaactt
     9661 tgaaaaagcc ccgattaccg ctaaaaactt tgaagattac gctaaagaag ggttttataa
     9721 cggcacgatt ttccaccgtg tgattgacgg ctttatgatt caaggtggcg gaatgacggc
     9781 aggtatggct gaaaaaccga caaaagatcc gattcaaaac gaagcgaaca acggtttaag
     9841 caacaagcgt ggcacaatcg caatggctcg cacttctgat ccgcattctg cttcgtcaca
     9901 gtttttcatt aatgtggcgg ataatacttt cttagattat cgctcaaaag agatgttcgg
     9961 cagaagtgta gtgcaagatt ggggctatgc agtatttggc gaagtggttg aaggtatgga
    10021 cgtggtcgat aaaatcaaag gcgtaaaaac cggcaataaa ggcttccacc aagacgtgcc
    10081 ggttgaagat gtggtgattg agtctgtaag cgttgcctaa ttccgcaaat tagcctacaa
    10141 gcggttgatt tttcacaatt ttttgcattt ctcagcgttg caaaaaagta gcagaaatcg
    10201 actgcttgtt tttatagaaa ttgatacagc caaataatca gcggcattgt aaacacacaa
    10261 agtaaagtgg ttacgccata aatcgcactg gcttttttgg catcttgccc gtaagccacc
    10321 gccatttggg tcgccgttgc agcagaaggg ctgatggtgg ctaagaatgt aatcattacc
    10381 accgtttttc cattctctat ccagctcgca aaaccgccga gtttaatcac cgctaacaaa
    10441 atcagcggaa taaaaatcaa gcggagaaaa gccaccaagt aaatgcgttt atcggtaata
    10501 atctctttaa atggaattgc tgcaattaac atacctgcca caagcattgc taaaggccct
    10561 aacatatgcc ctaaagttga gagcgtgttt gcaagcgtag cgggcagttt gatatgtagc
    10621 aaaaacaaca tcataccaat cacaatcgca ataatgttga tattaaagat catctttcta
    10681 aacggcacat tgcctttgcc acaaatcagc agccgtaagt gagaccaaaa caacacattt
    10741 tgcaccacaa taaaagccgt tgaataaatc acccattcat tgccgaacag ggaggcaaca
    10801 atcggaataa ttaagttgcc ggagttggaa taaatagcgg tggcttgttc tatgttgtct
    10861 aatttcaacg ctcttttgag cagccaacca agcagaatta acaagccgtt taataagacg
    10921 gagattaaaa atgccagata caagccgttt agtatttcgg tggtgtaatc tacttgaaaa
    10981 gcagtaatca gcattgccgg gctgataatg taaagtccga taaccgaaat cggataactg
    11041 tgctccgatt tgagtaattt agttttaacg atgaggtagc cgagcagcac catcagggtt
    11101 aattgtagaa ttttatcggc taataaaagg gctatttcca ttatcaatta agagcgagtc
    11161 tctcttctcc tgcataaatg gtcgctttgc ctttgcgggc aaaagcaagt aaggtaaatt
    11221 gattttcacg agccatattc actgccattt cagtggtcgc tgagatggca cacaacattt
    11281 caatgccaac ggctaagcat ttctgcacca tttcaaagct ggcacgactg gttacaaaca
    11341 caaatccaat cggaaaatca gctttagcat accaaccgat taatttatcc aacgccacgt
    11401 gtctgcccac atcttcacga atggcaagca gttttccatc cggggtaaaa aatgcagcgg
    11461 cgtggcttgc accggtttct ttcgataaga attgagcatt ttctagctgt aataaacaat
    11521 cctctaaaat cagtggattg acgttctgca agcggttatt tttcttaaca attttgcaac
    11581 tttgattaac ctgctctaat tgctctacac cgcaaatacc gcaacctgtt ctgcctgcca
    11641 ttgagcggcg tttatctttt aatgcaacaa attggcggct cgatatttca agctgaattt
    11701 ctactccatt ttcttgttca attacatcta aaccatataa ttccgatggg gcatttaaaa
    11761 tcccttccgc caatgagaat cctaaagcga agtcctccaa attagccggt gttgccatca
    11821 ttacagtatg agaaataccg ttatatacca aagcaaccgg cacttctgaa attaaatttt
//
LOCUS       DANMCL010000088        11640 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.089, whole genome shotgun sequence.
ACCESSION   DANMCL010000088 DANMCL010000000
VERSION     DANMCL010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11640
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.089"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            630..1358
                     /gene="ttrB"
                     /locus_tag="PXF40_002165"
     CDS             630..1358
                     /gene="ttrB"
                     /locus_tag="PXF40_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL5803462.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVMVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
     gene            1360..2391
                     /gene="nrfD"
                     /locus_tag="PXF40_002166"
     CDS             1360..2391
                     /gene="nrfD"
                     /locus_tag="PXF40_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL5803463.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            2381..5476
                     /gene="ttrA"
                     /locus_tag="PXF40_002167"
     CDS             2381..5476
                     /gene="ttrA"
                     /locus_tag="PXF40_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL5803464.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            5617..6462
                     /locus_tag="PXF40_002168"
     CDS             5617..6462
                     /locus_tag="PXF40_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5803465.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6575..7972)
                     /locus_tag="PXF40_002169"
     CDS             complement(6575..7972)
                     /locus_tag="PXF40_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5803466.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(8062..8685)
                     /gene="gmk"
                     /locus_tag="PXF40_002170"
     CDS             complement(8062..8685)
                     /gene="gmk"
                     /locus_tag="PXF40_002170"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5803467.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            complement(8798..9271)
                     /gene="gpt"
                     /locus_tag="PXF40_002171"
     CDS             complement(8798..9271)
                     /gene="gpt"
                     /locus_tag="PXF40_002171"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5803468.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            complement(9417..10826)
                     /locus_tag="PXF40_002172"
     CDS             complement(9417..10826)
                     /locus_tag="PXF40_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5803469.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            complement(11022..>11640)
                     /locus_tag="PXF40_002173"
     CDS             complement(11022..>11640)
                     /locus_tag="PXF40_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5803470.1"
                     /translation="RLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKETIEGKVTVRTQ
                     SYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEGTATYSGKAFN
                     HDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQISSTVHGNNPLN
                     LSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
BASE COUNT         3190 a         2679 c         2650 g         3121 t
ORIGIN      
        1 accacctcct tatatggagg aagaaaaatt tcaaaaaata ataatgaggt tttcaaaaga
       61 tataaaaata atgatgcaca accacataaa cttcatagaa tctgacagat ttgcggaatg
      121 gattcttgaa aaggcttgtg ttcgctctaa aacattaacc agcttttatg gcgacaagtc
      181 tgttataagg gccgttccac cattggattg gtcaggaaaa tataaatata ccaaaatagg
      241 atttagatta tgctacgatt tgtaggggga tatatgaaga aatacagtaa tgattctctt
      301 ataaatagta ttgttatatc taaattaaaa gcaggatgga aaattagaaa aggaaagaaa
      361 cataatatat taattgcccc aaattctagg agattagcga tacctagtac cccgagtgat
      421 attaatgcgt ataaaaactt tagatctaaa ctaaaccatc ttattgcttt ttaattagta
      481 tcaatgccct attatctact tgtatagggc atttcccttc atccttgacc caaatcaact
      541 ttccccttga tatgtggaaa accacaatac cttgccgttc cctctccgcc ttagaatacc
      601 tttgttattt ttaaatttgt gggggaaata tggatttaag caaacgttcc tttttgaaag
      661 agctttccgc cttgacggtg ggggcgagtt ttgtgccgtt gcaatcggcc caggcgttta
      721 tgccggcttg gcgtgagggc gatgagaaca aacgctatgc gatgctgatt gatttgcgta
      781 aatgtatcgg ctgtcaagcg tgtaccgtga gctgttcggt ggagaacgcc acgccgttgc
      841 acagtttccg caccacggtg cgtcaatatg aaatcaccaa cggcacgcag gtggtgaaca
      901 atgtggtgtt gcctcgtttg tgtaaccatt gcgatcaacc gccgtgtgtg ccggtctgcc
      961 cggtgcaggc aacctttcaa cgtaaagacg gtgtgatggt gattaacaat gagcagtgca
     1021 tcggctgtgg ttactgcgtg caagcctgcc cgtatgatgc ccgttttatc aatgaagaga
     1081 ccaaaaccgc cgataaatgc accttctgca ctcaccgttt ggaggtaggt ctgctgccgg
     1141 cgtgcgtgga aagttgcgtg ggcggggcaa gggtgattgg cgatttgaac gacccgaaaa
     1201 gtcaaatttc ccaactttat caagcccaca aagatgattt gaaagtcctg aaaccggagg
     1261 ccggcaccgt gccacacgtt ttctatgtgg ggctagacga tgatgccttt gtgagcaaaa
     1321 ttgacgggca accaatgctc tggacggggg aggcgtaaaa tgattcgtga agtattagtg
     1381 gaaccgcaac atatcgtctg gttgccgtgg attgtgcatt atttcttctt cgtaggcgtg
     1441 gcggcaacgg cagtgtttac cgccgtgctg tttgcaaaaa aatcactgaa accgaccgct
     1501 tgcgagctgg cggcggtgac ggtagccttg attggctcga ttgtcgcccc tgtggcattg
     1561 actgccgacc tgcaccaacc gagccgtatt ctgcatttct acaccgattt tgcgtggcga
     1621 tctccaatgg cgtggggagc gattatcctg cccctgttca gcgtggcggt agcgggttat
     1681 tttgtgctgg cattggctca ccatacccgg ccgaacctgc cgaaatggtt agcgtggcta
     1741 cagttgccga tactgcaaaa tcaaggcttg ctttgggcat tccgcctgtt tgccacactc
     1801 accgctatcg gcattatcgg ctacaccgtg cttgaaacct accaaaccgg cacaagaacc
     1861 ttatggcaca gtgcgtggct gctgccgatt atgctctttt ctgcgtgggc ggtggcattg
     1921 gggcttaccc aagcggtctg caaaatgctg ttccacaccc aaaccaacac ggggctatgg
     1981 acaaaactct gcctgatttt aaccgcactt tcgcttgtcg gactagcatt cagtagtcca
     2041 caagccacac aagattttgc ccagctcttc aatggctcaa tcaccgctta ccttgtcggc
     2101 attttctggc taattgccct catttgcaat ttttctgcca aaaaccaccg cttgcaatgg
     2161 ctcggcgtgc ttgccctcat cgctttcggc tggctactcc gctgggtact ggtgatccaa
     2221 gtccaaacca ttgccaaaac caatgccttg caaaatccat atcatttcga ttggacagcc
     2281 gtcgatggtg gtttggggat tgtctcgatt tttgggctaa cggtgctagt aagtatcgtg
     2341 gtatggcaac tgattttaat aatttgtggg ggaagaaaag gtgaacaata aacgcagaaa
     2401 tctgttgaaa ggcgggctgg cacttggtgg ggcggcggcg tttggggccg ggtattcgcc
     2461 gaaggtgtcg gagattgcca aaggggtgat gcacggcaca tcgggcgaga aaacccgtga
     2521 tgcaattcac ggtaattcgc tcacgccgga gtatcaggta aaagacggca aactgctcag
     2581 caatcctgag caaattgtgt gcaatacaca gtgtatgggc tgttggacgc agtgtggcat
     2641 tcgggcgagg gtggatttga acaccaacca agtgattcgc atttcgggca atccgtatca
     2701 cccgctttcc tccgacaaaa ccctgccgtt cggtatgccg attgccaagg cggaactgtt
     2761 gctggcgggc gaaagtggca ttgaaaatcg ctccaccgcc tgtgctagag gggcggcgtt
     2821 cttggagggg gtgaacagcc cgtatcggat tacccaaccg ttgaaacggg tcggaaaacg
     2881 gggcgaaggc aagtggcaga ccatcagctt tgagcagttg gtggaggaaa tcatcaatgg
     2941 tggcaaccta tttggtgaag gcgaagtgga gggcttgaag acgatccgca atctggtcga
     3001 tccgattaac ccgaaacagc ctgatttggg aatgaaagca aaccagcttt tagttacttt
     3061 tgccggcccc gaaggtcgtc agccgatttt gcaacgcttt gcccaaaaga gcttcggcac
     3121 gatcaacttt tccaaccacg gggcttattg tggcgctgcg taccgtgccg gttcgggtgc
     3181 ctttatgaaa gattttgaca accaacaaca cgccaagccg gactgggatc acgctgaatt
     3241 tattctgttt atcggcacgt ctccggcaca gtcgggcaat ccgtttaagc gtcaggctcg
     3301 ccagcttgcc aaacgccgcc ctgatgacaa tttcagctat gtggtggttt cccctcgttt
     3361 ggagatgacc tcctccctcg ccacccaaaa caaccattgg gtgccgatta agcccgaggg
     3421 cgatttggcg ttggtaatgg gaatgttgcg ttggattatc gaaaacgagc gtttcaatgc
     3481 tgactacctc tcccgcccaa gtctggcagc gatggaaaat gccggccacg tcagctatgc
     3541 caatgcgtca catctgatta tttgcgaacc gaaccacccg aaattcgggc aggcgttgcg
     3601 gattagcgat ctgcaagatg tgcaactcga ccccgaagag aaagtggaag aaaacctgat
     3661 tgtggtaaaa gatcaggcaa gcggcgaact catttcagca aaagattgct tacaagcggt
     3721 catttttgtc gaacaaattg caaaactgct tgatggctcg gaagtgttgg tgaaatcctc
     3781 aatgcagttg ctgaaagagg cgacacaaga gaaaaccctt gccgaatata gcgacatttg
     3841 tggcgtgccg gtgcaaacca ttgaaaactt agcgaaaaaa ttcacttcgc acggtcataa
     3901 agccaatgcc atcactcacg gcggcacgat gcacagcacc ggtttttata ccagttgggc
     3961 gattttgttg ctgaatgcaa tggtcggtaa cctcaacaaa aaaggcggaa tggcagtagc
     4021 cgcaggcaaa ttcaaagatt tcggggacgg gcctcgctac aatttagcga acttcccgaa
     4081 tgaagtgaag ccaaaaggca cgaaccttgc ccgcagtaaa aaggcgtacc aaaattcaag
     4141 cgaatttaag cagaaagtga cgaagggcga aaatccgtat ccggcacaag gggcgtggta
     4201 tccgttcacc ggcgggcaaa ctaccgagat gtttacctca atggtgcagg gctatccata
     4261 ctttgcgaaa gcgtggatca accatatggc gaaccccgtt tacggcttaa ccgctatgaa
     4321 cccgattgcg ttggagaaat taaaagatcc gaaaattcta ccgctctttg tctctattga
     4381 tgcttttatg aacgaaacca ctgcactgac ggactacatc gtgccggaca cccacaactt
     4441 tgagagctgg ggcttttcaa cggcgtgggg cggtgtgcct caacgcacca gcaccgcacg
     4501 ccacccgatt gtgccgtcca aaaacgccaa aactgccgaa ggcgacacca tctgtatgga
     4561 gaatttcgtg attgcggtgg cgaaaaaaat gggcttgccg ggctttggcg aaaatgcgat
     4621 tgccgattta gaaggcaacc gctatccgct ccaccgtacc gaagattact tcctacgggc
     4681 ggcagcgaac attgcctttg ccggtgagaa acctgcaccg gacgccagcg agcaagatct
     4741 gctgctcacc ggcgtgcaac ggattatgcc gaaaattgaa caaacgctaa aagccgaaga
     4801 gcgattaaaa gtggcgaatg tgtattgcaa aggcggacgt tttgccccac acgaaagtgc
     4861 gtggaaagag gagaatatgg agttccagtg gaaaaactgc ctgcaaattt ggaacgaaaa
     4921 cgtgtataaa gcccagcacc acagcaacgg tgaacactat tggggctgcc ctcgttatat
     4981 gtcgccacgt tttgcggacg gctccacgct ggagcagcac tatccgcagt cggaatgggg
     5041 ctttaaactg atttcgttta aatcgaacat tatgagcagt attaccgccc cactgttgcg
     5101 tctgctctcg atcaagcctg agggcttagt ggcgatgaac cgtttagatg cggaagaaaa
     5161 aggcattaaa cacggcgatg tggtgaaact cagcacccca accgccggct tgacggtgca
     5221 gattgtggtg ttggacggta tcgcccgagg cacaatcggc atcgaacacg gctacggtca
     5281 taaacagatt ggggcaagtt cctacaccat tgacggcgtg gaaattccag ccaacccgat
     5341 gatcgccaaa gggattaacc tcaacgacct cggcattatc gaccacacca aagcggtcaa
     5401 atccccgtgg gtagattggg tctgtggctc agcggtgaga aatggcattc cggcgaaggt
     5461 agagaaatta gcctagccga acaagcggtt ggttttgcag aaaaatgtgc aaaatcgacc
     5521 gcttttattg atgtaaggga cactgttcct tatgcaaacc agcattgcag agcgtaaaaa
     5581 atcatactct gcattttaat ttattttgga gaacctatga cttttgtcaa aaaaacagca
     5641 ctgagcctga ttgcaacggc acttttcgct acatcaagtt ttgccgctga gcagagccaa
     5701 taccaacata ttcgtaatgc aacggcgaaa attgaatatg ccggcaagac gtttttggtt
     5761 gatccgtatt tagcggagaa agatcgctac ttaccgccga atgcgaaaaa acgtaatccg
     5821 accttggata tgactgtgag cattgatgaa gtgttaaatg gcgtggatgc ggtgatcgta
     5881 actcacactc accacgctca ctgggacgat gtagcacaac aacgtgtgcc gaaaaatctg
     5941 ccgatttttg tgcagaatgc cggtgatgcc cgtttaatcc gttcacaagg ctttaccgat
     6001 gtgcgtgtgg tcggcaaaga taccccgttt gaaggcgtaa ccttaacccg aactcgtggc
     6061 cagcacggca ccgatgcgat gtatgcgaac ccgaaaattg ccgaaatggt cggcgatgcg
     6121 atggacgtag tgatgaaagc ggaaggcaaa ccgaccgtct atttggtggg agataccatt
     6181 tggaaccacg aaatcgaaca ttcgttcaac acttacaaac cagactttgt ggtgctgaat
     6241 gccggctgtg ccaaactacc aaactttgaa ggcagcccga ttatgtgtac cgaagatgtt
     6301 tccaaagcac acaaaatcgc tccacaagcg aaaatcttaa ctgtgcatat ggacgccctg
     6361 ccacaaacct caatcagcag tgatcagatg cgtgattatg tacaaaaaga gggattaaat
     6421 cgtgtaactg tgccgaaaaa cggtgatgtg attaagttct agtagctaaa ctaacattac
     6481 caaaatggtt taagtagcaa taaatagcga agcgggttaa gccatcaagc cttaacccac
     6541 ttttaccaac catagtatat agttttagat ataattatct tctgtattta cctgccattg
     6601 cttggtaaac cgcattctcg ttggtcaaaa tcgcatattt tgcatttaaa atcgccaact
     6661 gagaattaag ctcggtattc agtgcggtaa tccactcacg gaactccgac accccttgtt
     6721 cataacggtt tttatagtat gaactgatac gtttattttt cgcattggta tcttgaagga
     6781 tttttaacga gcttctcgac tgcgtataac tgtaataata acggtcaatt tcatttaagg
     6841 ctgaggtaat tttttgctca tagtttaaac gggcagtcac ataatccgtt tcagaaattt
     6901 ttacgttatt tttaacccga ttccaatcta agaacggtaa atccaattta attaagccgt
     6961 tacccacagg gttatctgcc acattgccga tattggttgc actaccggta atagaaccac
     7021 cgatggttaa ggttgggaac cagcttttct cggttgcggt taaggtttta aatgcacttt
     7081 gtaagcgttg taacgagcct actacatcag ggcgattagc aatggctgac actggcacat
     7141 ttaaatctac cccttgcaat ttcacgctca taatattcgg gtaacgaatg ttaagcggag
     7201 tatttggctg aacatttaac aaattgcgta atgtttgctc ggcaattttt tggttggttt
     7261 tcagatcaat tacactattt ctggcgttta agaccgcttg ttgagcctga tcaaccgcta
     7321 aactatcaat cgcaccggca ttcattttgt tagttaaaat acggctgatt tgctcataat
     7381 ggcgaatgct ctcttcggta atacgaatcg catcacgata gtaagctaac tggtagtaag
     7441 tagtcacaac cgcattaata atagataaac gggtagcttt taagtcttca atggtggctt
     7501 tatgcgtcca ttctgccgca ctggcggtat cggctaaacg tcgccataaa tccacagtat
     7561 aacttaaatt aaatgcagct tgagctgcgg ttgttgaaac accggtcgaa acattatttg
     7621 aagaagccga acctaaacct ttagccgcag aaacagaacc tgaaccacta aaggttggca
     7681 ctaaatttgc ccctactaaa ttagcgttat acaaggcttt attgactgca attccgcttt
     7741 tggctaaatc aaggttattt ttgatggcta aatcaaccac acggtttaat tccgcatccg
     7801 tatagccttg ccaccattgc tcgttaattt gatattgttt ggtaatttca tcatagcttt
     7861 gataggtttg ctgtgcttgt tgcaaagtcc cgtcattgct catattccct gtggtacaag
     7921 ccgttacggt tagagccaac gccacagaaa atgctaattt tgaaagtttc attacatttc
     7981 cttttgaaaa taaagagggg aaaatgggcg tattctaccc aaaaacagat tgcctttcca
     8041 gttaaatgaa caactgttca tttaattatt taacaaatca gtaatcaaat gctgatgacg
     8101 aatttgttgc gaacctaagc tcaaacgctc ggcaattaaa atcgctttta gctctgccaa
     8161 tgcctgttgg aaatcatcat taataatcac ataatcgaac tcattgtaat ggttcatttc
     8221 cgacaccgcc tctgccatac gtttggcaat ggtttcagcg gaatcttgcc cacgcccgat
     8281 taaacgtttt tccaattctg tttttgacgg tggcaaaata aaaacggttt tcacattcgg
     8341 cactttttcc cgaatttgtc tagccccttg ccagtcaata tccaaaaaga catcaatgcc
     8401 ctgctctagg ctacgttcaa tcatcggcaa tgatgtgccg taataattgc caaacacctc
     8461 cgcccattct aaaaaatacc cttgctcaat cagctgctta aactcatcgt gcgaagtgaa
     8521 ataataatgc acgccgtcct gttctgccgg acgaggctga cgggtagtgt gtgaaatcga
     8581 aagctgtact tccgaacggg gtaaatccgc caacaaggcg ttaattaagg aagattttcc
     8641 tgctccactt ggggcagaaa taatataaag attgcctaaa ctcattattt gtatatacct
     8701 atttgatttt gggaataggg cgaatgatga ttcgccccta catttcatag gaataaataa
     8761 aaaataatgg acaactttca ttgtccatta cacaaaatta tctacgtgcc aaaggctgaa
     8821 cgaaggtaat gcctaaatcc caaggctgct caatccacgt ttcttgtgga atatcaatca
     8881 cataatcatc aaccaacggt gcaccgtgcg gtttcgcaaa cacggttaca aaacgagctt
     8941 tcgggtacat tctgcgaatt tcttttgccg tgttgccggt atccactaaa tcatctacca
     9001 caataaagcc ttcgccatcg gtatcggctg cgtgtaacac atttaactca ccttggctat
     9061 cgtgatcgta gctggcaatg cacactgttt ctacgtggcg aatacccaac tcacgtgcta
     9121 aaacggctgc cggaaacaag ccgccacggc tcaccgcaat aatccctttc cactgtgtgg
     9181 caggtaataa attttctgcc aacttgcgag cgtgcatatg gaacatatcc cacgtcacga
     9241 catatttttc atttgtgtat ttttcactca tagaaacaac ctaatataaa attgggggct
     9301 accccgatat aaaaaattgc actaggataa cccgaaaatg cttttttcgc catcatttca
     9361 tttatttttt tgtgccggca gctacgcaat cgtatgctta gcacaaaaaa ccaacactaa
     9421 aatagctttt ctaaagtgaa aaagacttcc ttgttttggc gagagtaaaa atcagcaata
     9481 ttgctgtcaa ttttttgata acggaaattc agcttcggca caatgccctg ccaatgccaa
     9541 gtgcggttcc aaaccgctaa attggcttga tattccgtgt ctaaccgctt atagccaaac
     9601 aaatagtgct tgtcggcaaa atatcgcttg ccaaagccga tacttgcctg cgttgcccag
     9661 cgttcgcctt gaaaaaccgc ccccactcga gccagccact tattcgagct ttgtgctttt
     9721 tcccgtgcaa tttcacgcac gccgtctaaa tttgcaaaaa accgcccatt tttgaccgct
     9781 tgccactgca caccgccact gagttggtgc tgatagctgt tataacggct tgcggttagc
     9841 tcctcaaaat accgtttttg caaatgggta aaactccccg acaccaacca ttgcgaatta
     9901 aggtaacgca aaccgttgag tgttgcccca aattgaacat tataacggct actccccagc
     9961 caattttgct caataaaagg cgaaaaagtc agccgataag cgacggtgcg gtagctataa
    10021 ttcggcgaaa cggatacgga ttgctcacgg taatctcggt tatcccaata gtaaatcccg
    10081 ctataattga gcgttaaacc gacaaaatga ttgcctttca cgttgtgcaa tttactcaac
    10141 cctaagccat aacgcacgcc ttttgctgat tgtggcaaac tgtctgcatt tttgcggaaa
    10201 atccgcccat ttacattcac aatcggcgaa gatgaggcat tattcacgtt atctgtttgg
    10261 gtatattgca gataaaaatc gggctgccac gcctcatttt cagcaatttg gacttgagta
    10321 ttgcgggcaa ttttagcaag ttccggcggt aaatgggctt gaatagcctt aaattcctgc
    10381 tctgccgcac gaaattgctg atcttctgcc aaaatcaacg ccaaatcaaa acgagggtaa
    10441 accaaactcg ggggcttagc taacagttgg cgatagtgaa aaactgcggt ttgatgatct
    10501 tttttcgcat aggcaagtgc ggcttgcgca tagtgccaca acaacgggtc aaaattttca
    10561 gtttgcggat aacggcttaa aagcggttca agcgttgccc aatcttggct gagaatcgct
    10621 tggttaattt gctgttcaac attctgattg actgaatacg caggctgata agcggtcggt
    10681 ttttgtgaat tttttacaac attttgctca aatttaaccg cttgcggctg acgctcaaag
    10741 gaaatcgggt cagtgttgtg ttcaatcacc ttttctgccc atacaacggg gctgaacagc
    10801 gaaaataaaa ggggatattt tttcataaag ataaagaaaa ttggtagggg cggacctata
    10861 tgttcgcctc tacgggattt atcactctct ccccttgtgg gagagggtta ttagaagctg
    10921 taaattgaaa tctaaactat tgtgtcttat ggtatctaca agcaatatca agacaaatgc
    10981 cgtttaattt ttcgttaaac ggcattgaac gttagaaaag gttatttttg gatatcgcca
    11041 cgagtgccgg caagtccaaa attactcact tccccagtaa gatttgcttt tgtctgaatt
    11101 tcaccggcaa tttcctctgc atttttaccg aaaaattcga ctgtatattt tccagaaagg
    11161 tttaaaggat tattgccatg tactgttgaa gaaatctgag tattattaat cgtcccctct
    11221 tctaatacga ttaagtttcc aaattctccc tcaactctac ctgaaccggt acgcttagag
    11281 aaattaacat tataggttag atcaccacca ttaaaacctt tagctccatc gtggttaaat
    11341 gcttttcctg aatatgttgc agtaccctct gttggtaatt tctctgtttt caatccttta
    11401 actgtaactg ttccatcaac tttatcaata taattaccgt tttcccagcc atttctttga
    11461 actgcttgtg ctgttactac agaatatggc tgattatata aataactctg tgttctgact
    11521 gtgactttac cctcaatagt ttctttacta ttaccaagtt ttaagccgta atttgtatca
    11581 tcaatacctt ttgctttaat aatagctata ggatctactt ctttttctgc tgctaaacgc
//
LOCUS       DANMCL010000089        11404 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.090, whole genome shotgun sequence.
ACCESSION   DANMCL010000089 DANMCL010000000
VERSION     DANMCL010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11404
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.090"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(6..491)
                     /locus_tag="PXF40_002174"
     CDS             complement(6..491)
                     /locus_tag="PXF40_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803471.1"
                     /translation="MIQNDPRDAIILSLLANAVYGGHNNSQISYQETEEVNLYARLRQ
                     VEGDVREIKSNYLTKEAFYKAGGSTLIALVVTAGIALWTVYSHLDTKVEARFSKIDDK
                     FVQVETNIKNLDIRLTKVESRLDNVEQRLDNVEQRLGNMEKKIDGVDNKLDLLLQQFK
                     R"
     gene            complement(496..876)
                     /locus_tag="PXF40_002175"
     CDS             complement(496..876)
                     /locus_tag="PXF40_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803472.1"
                     /translation="MNNKRIKPEQFADFITQRTGRNLTCPICNSQEHYLHDGYDTFTE
                     LCGEKIIGVPTIPYRIEPSPDEVMKFAAPEFHSLHFNEREGTKYWLDQKARTAVIVTC
                     VCCNNMLFFDRERILEWIKGSQNE"
     gene            complement(927..1586)
                     /locus_tag="PXF40_002176"
     CDS             complement(927..1586)
                     /locus_tag="PXF40_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HDL5803473.1"
                     /translation="MTTLGSRIKAYREQLGISQYEVAERCTSIDNRDKNNKWGQSRIA
                     NYERNNRTPDLDDIEILSKVLGVSPETLAFDTNVQLARPTKSNSYPLISNIQAGLWTE
                     AFDFKDSEGYDYIDTEIDAGPDAFFLRISGMSMEPKFSEGDLVLIDIRKRPHPGDYVA
                     AVNGTGEATLKRYRELGEWSESGNPHFELIPLNPDFPTLSSMKQDIRIIGVAVEHRSY
                     L"
     gene            1716..1922
                     /locus_tag="PXF40_002177"
     CDS             1716..1922
                     /locus_tag="PXF40_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005656653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5803474.1"
                     /translation="MNKIAEIRNQIGISQAQLAVQIGWGQPRIANYETGNRTPSIYVA
                     QKIVEGLNELGANVRIDDVFPVGN"
     gene            1943..2203
                     /locus_tag="PXF40_002178"
     CDS             1943..2203
                     /locus_tag="PXF40_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803475.1"
                     /translation="MPRNELTKNARAIADLIHRKSATVTHKKLARAIGLSESQFSRTF
                     ADNVEMVAVIIDYLSIELADKDELLELKEKRYKRINLEEATT"
     gene            2367..2537
                     /locus_tag="PXF40_002179"
     CDS             2367..2537
                     /locus_tag="PXF40_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803476.1"
                     /translation="MKNQRNDTQKSSLWQEFEYRKRLKNLIESGLSVAEIETRSQQIY
                     EELKSECTTEAN"
     gene            2512..3381
                     /locus_tag="PXF40_002180"
     CDS             2512..3381
                     /locus_tag="PXF40_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HDL5803477.1"
                     /translation="MNAQPKQINPILKLHPKQSEAKKVSVDDGYTQIPNELLKAILRS
                     GVLGWKGSYLLATVLKTLSWHKESDWFTHSQVCEMMNIEPTKYHINQLSAARKELIRE
                     NILFEDGKETGVNLSVFEWKMVYPEKVGSSRNNRELIPEKVGNGYPEKVGNTKETITK
                     EKINNEFTNVNSVQQPETSLPKKTKSEPVDYQGVMEEFNRAVEDTPIPQIRAMSDERK
                     RSVHALAKILRKEFGGYTRQHFADYFNDFVRQASSRKDRFYFGGLDGSAWVANFGYII
                     RSKTFYKTWEDSL"
     gene            3378..4739
                     /locus_tag="PXF40_002181"
     CDS             3378..4739
                     /locus_tag="PXF40_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase"
                     /protein_id="HDL5803478.1"
                     /translation="MSQNLKNITYEVEYLLVGALLKSGLNSKARDVLSWLEPEMFATF
                     QLGVIYEAIRKQALKDNVIDMLLLNTDYGQDFATLAEIMKNTISGANLDGYAEKVRQY
                     HQRREAQRVFLDVAGELQNARDEQLDAITSTGLAHLSKLLQRGGKVKPIDMNDLLEGY
                     LELFQERAKPSFKERLLFTGIEALDGKLGGINDTDICIVAGRAGNGKTETAITFTKNI
                     IENKGSVLFFSLEMSKEQIMDRLIASASGVNSVKLRNPEMMNDEDFARMGTAIQPLQN
                     QQLYIVDKSGLTAEEIVAIAESHIQEYGKVSAVVIDYIGLVRHGKLDGKINRTYQIGE
                     SMERFKTFCKNNHTPMILLAQLNRNADGSRPTNADLRDSGSLEQDASQIIMVHNQRNK
                     DGEPAPYTEWIVTKNRFGANGTVYMQFQQGRFVECDQAEAREYFQPKETKTSSNKRYG
                     AMQ"
     gene            4736..5272
                     /locus_tag="PXF40_002182"
     CDS             4736..5272
                     /locus_tag="PXF40_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HDL5803479.1"
                     /translation="MTDFDKNIKYKIIYADPPWKYKDSGCNGSAENHYTTMNIKEICD
                     LPVQDISDKDSILFLWVTYPMLPEGLKLIEAWGFNYKTIGFQWVKTNKKNKNSFFFGL
                     GRWTRGNTECCLIATKGKPSRVSNKVSQLIIEPIQHHSKKPDIVREKIVELMGDLPRI
                     ELFARNKTQGWDVWGDEV"
     gene            5363..5578
                     /locus_tag="PXF40_002183"
     CDS             5363..5578
                     /locus_tag="PXF40_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803480.1"
                     /translation="MITYKCPKCNGELEDLSINDEWGWFLDEPYRCNGHYTGRFPNIS
                     RDSTLNRTKSCGYFSKEEVKKVNGTQR"
     gene            5562..6068
                     /locus_tag="PXF40_002184"
     CDS             5562..6068
                     /locus_tag="PXF40_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
                     /protein_id="HDL5803481.1"
                     /translation="MAHSVNDIVKAHGRRYKARLKIQMIKMQGGVLVPLNEREAEALV
                     SLKNGEQYEIEVIRTRNPAFHRKVFAFLNFCFEYWSADKTEWEFFDERKQFDTFRKNL
                     TVLAGFKEITYTLDGRMRVEAQSLSYGNMEQDEFEQVYKALINAAIKHVFNNTKDENR
                     INQLYSFF"
     gene            6118..6330
                     /locus_tag="PXF40_002185"
     CDS             6118..6330
                     /locus_tag="PXF40_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803482.1"
                     /translation="MKKNVIRYWLSVPFRIIAVLFFLVILTVRYVGYLLIYPLAFFAA
                     VGSFIVFCQWTYQEWLYYFKRGFAPI"
     gene            6376..6570
                     /locus_tag="PXF40_002186"
     CDS             6376..6570
                     /locus_tag="PXF40_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803483.1"
                     /translation="MTKFFETIAFVMLFGIIPSCLLAINTTLMNMNIKNAPWFMVIIQ
                     LGFNITCYWLWFISVMRNVI"
     gene            6698..7267
                     /locus_tag="PXF40_002187"
     CDS             6698..7267
                     /locus_tag="PXF40_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinG"
                     /protein_id="HDL5803484.1"
                     /translation="MANKPPKQHKCKECGSYYIKFQSTQQVCSVKCAMAMGKRKTEAK
                     RKKSAKIDRLEQRKRLEKLKSRRDFEKDLQKIFNKFIRLRDKDLPCISCGRYHQGKYD
                     AGHYKTVGGNPELRFNEDNCHSQCVPCNRHLHGNIVNYRVNLIEKIGLERVEFLERKD
                     HPPLKLTIEQIKDLIKVYKAKCKELERVT"
     gene            7257..7730
                     /locus_tag="PXF40_002188"
     CDS             7257..7730
                     /locus_tag="PXF40_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803485.1"
                     /translation="MLPRKIKNKWLEPEKQKWIEELLRLWGAWEFGGLDLESRVNMIY
                     RLMKSAEGVKSLSSREVCNDSLGTLINEIFTVVTKRDVMLADILKQKYWFGRSERQIA
                     IYYQLRDSEGRKERRWQEIIQDKCKKAERIIADILESKISSSNSTDKLKKYQFSP"
     gene            7958..8033
                     /locus_tag="PXF40_002189"
     tRNA            7958..8033
                     /locus_tag="PXF40_002189"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7991..7993,aa:Trp,seq:cca)
     gene            8050..8235
                     /locus_tag="PXF40_002190"
     CDS             8050..8235
                     /locus_tag="PXF40_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803486.1"
                     /translation="MYNLDDAIQECREKFGEDKPYFSEAGTLTFAGCKALSRLRDEKL
                     GIKAPPNFPFPRVEDLS"
     gene            8261..8431
                     /locus_tag="PXF40_002191"
     CDS             8261..8431
                     /locus_tag="PXF40_002191"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803487.1"
                     /translation="MTEQLNTQSKSGEEDQEKSQDRYAVGWPSRRISDCVQHFRSRKI
                     YPFASNNDVKQG"
     gene            8574..8819
                     /locus_tag="PXF40_002192"
     CDS             8574..8819
                     /locus_tag="PXF40_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803488.1"
                     /translation="MKLMKDMGTQSYIWSGFSTWLAWLGEQQNLMLLSLAIGIVTAIA
                     GLIQRFDEWRRRKREDERAEELHQAKMARLRKGLSDE"
     gene            8812..9381
                     /locus_tag="PXF40_002193"
     CDS             8812..9381
                     /locus_tag="PXF40_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HDL5803489.1"
                     /translation="MSKSLKYGSGIVCGIAAIITLVQYQHPEIRTNQAGLEIIGNAEG
                     CRRDPYKCPADVITVGIGSTEFGGEKIDPNRIYSDKEIAERWAKDLKIAESCVNRHFN
                     GKDMNDNQFSGMTSAVFNMGCYNMRFYRNKQGQYVQTTIHKLAVNKQFEEMCHRLPDF
                     IRASGKVLNGLVIRREKEKALCLTGLVAR"
     gene            9354..9704
                     /locus_tag="PXF40_002194"
     CDS             9354..9704
                     /locus_tag="PXF40_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HDL5803490.1"
                     /translation="MLNWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQ
                     QKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNEITSILAQDSCAKADLPNGVA
                     DSIKRLHQQNNHKH"
     gene            9709..9882
                     /locus_tag="PXF40_002195"
     CDS             9709..9882
                     /locus_tag="PXF40_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803491.1"
                     /translation="MYPPAAYLVPCGRTEFSGRTYGDTVEYLVKVMGERDLCANQIDR
                     IREWQAQTKQGFK"
     gene            10274..10798
                     /locus_tag="PXF40_002196"
     CDS             10274..10798
                     /locus_tag="PXF40_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HDL5803492.1"
                     /translation="MTKKGEVKATSKGVGKLTDKQKRFVEEYLIDLNATQAAIRAGYS
                     EKTAYSIGEENLRKPEIRSAIQEAQNKRSERTQITQDDVLNGLLEVIAMSTGKKIVTE
                     TDVAKNDNGELVGFDIAKTKFEPAAANKALELLGKHLGMFKDKVDLINSDGSLNRPMV
                     IELIAPSLDDESTD"
     gene            10782..>11404
                     /locus_tag="PXF40_002197"
     CDS             10782..>11404
                     /locus_tag="PXF40_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HDL5803493.1"
                     /translation="MKAQIELPPKLLPVFAKDYRYKGAYGGRGSGKTRAFAKMSAVSA
                     YKRAMRGESGVILCGREFMNSLEESSLEEVKQAIKSEPFLANFFDVGEKYVRTKDGRI
                     SYVFSGLRHNLDSIKSKARILIAWIDEAETVSETAWRKLIPTVRENNSEIWVTWNPEN
                     RGSATDTRFRQNPPENSCIIEMSYQDNPWFPDVLEQERLNDKQRLDDA"
BASE COUNT         3653 a         1956 c         2581 g         3214 t
ORIGIN      
        1 ttattttatc ttttgaattg ttgtagtaac agatcgagtt tattatcaac cccatctatt
       61 ttcttctcca tattgcctag tcgctgctca acattgtcta gtcgttgttc gacattatcc
      121 aatctagatt caactttagt gaggcgaata tcaagatttt tgatattggt ctctacttgg
      181 acaaacttat catcaatttt cgagaatcga gcttcaactt tggtgtcaag gtgtgaatat
      241 actgtccata atgcaattcc agcagtaact actaatgcaa tgagtgtaga gccaccagct
      301 ttataaaaag cctctttcgt caaataattt gacttgattt ctcttacatc gccttcaact
      361 tgtcttaatc gagcatataa attcacttct tccgtctcct gataactaat ttgtgaatta
      421 ttatgcccgc cgtatactgc atttgcaagt aaggatagta tgattgcatc tctaggatca
      481 ttttgaatca ttggtctatt cattttgtga gcccttaatc cattctaaaa ttctctctct
      541 gtcgaaaaaa agcatattat tacagcaaac acaagtgaca ataacggctg ttctcgcttt
      601 ttggtctaac caatattttg ttccttcccg ttcattgaaa tgcaaagaat gaaattcagg
      661 agctgcaaat ttcataactt catcaggaga tggctctatt cggtatggaa tggttggaac
      721 accgataatt ttctctccgc ataattccgt aaaagtgtca tagccatcgt gtaaataatg
      781 ttcttggcta ttacaaatag ggcaagttaa attccgccca gtacgttgcg tgataaaatc
      841 cgcaaactgt tcaggtttaa tgcgtttatt attcatttta acttcctttc tacccaataa
      901 aattcaactg ttagctttgg tggactttac aaatagcttc tatgctcaac agcgacacca
      961 ataatacgaa tatcttgttt cattgagctg agtgttggaa agtcggggtt aagcggtatt
     1021 agctcaaaat gaggattgcc ggattcagac cattcgccta actcccgata acgttttaaa
     1081 gtagcctcac ctgtgccatt aaccgctgct acataatcgc ccgggtgagg acgtttgcga
     1141 atatcgatta acaccagatc gccttcacta aatttaggct ccatcgacat tccggaaatt
     1201 cttaaaaaga aagcgtccgg tccggcatca atttccgtat cgatatagtc gtagccctcc
     1261 gaatctttga aatcaaaggc ttctgtccat aaacccgctt gtatattgct gatcaacgga
     1321 tatgagttcg attttgtcgg tctggcaagc tgaacgtttg tatcaaaagc aagtgtttct
     1381 ggagaaacac caagcacttt gctgagtatt tcaatatcat caagatcggg agtacgattg
     1441 tttctctcat aattagcaat gcgagattgc ccccatttgt tatttttatc tcgattatct
     1501 attgatgtac atctttcagc aacttcatat tggctgattc ctagctgttc tctgtaagcc
     1561 ttaattctac tacctaaggt tgtcatagca ctctcctatt agattttcct cattttaaca
     1621 cgctccgtta tatccttgtg aatcacaaaa tgaaatttac aattagttca ttttgtgatt
     1681 taattaaaag atataaatca caaagagaaa tttgtatgaa taagatagct gaaatacgaa
     1741 accaaattgg tataagtcaa gctcagttag ctgttcagat tggttggggg caaccaagaa
     1801 tagctaacta tgaaactgga aatcgtaccc catctattta cgttgctcaa aaaattgttg
     1861 agggattgaa cgaattaggt gcaaacgtac gaattgatga cgttttcccc gttggcaact
     1921 aatttacccc aagaggcttg caatgccacg caatgaatta acaaaaaatg caagagcgat
     1981 tgcggatttg attcatcgaa aatccgcaac ggtgacgcat aagaaactag caagagcaat
     2041 cggactgagt gaatcacaat ttagccgtac atttgcagat aatgtggaaa tggtggcggt
     2101 gattattgat tacttaagta ttgagcttgc ggataaagac gagttactag agctgaaaga
     2161 gaaacgatat aagcgaataa atctcgaaga agcgacaaca tagaagttac caacaatgaa
     2221 aaatttttta gaaaaattca aatcattcta ccacagtaaa aattcaattt ttattagagt
     2281 ggcaattttt atgctgcttg cgtggtgggt ttttaacaat taaaaaacca ccgctggaac
     2341 ggtggtaatt tacaaggagt taccttttga aaaatcaacg caatgataca caaaaaagct
     2401 ccttatggca agagtttgaa tatcgaaaac ggttaaaaaa tctcattgaa agcggtttat
     2461 ccgtagccga aattgaaacc cgttcacaac aaatttatga ggagctgaaa agtgaatgca
     2521 caaccgaagc aaattaaccc aattttaaaa ttgcacccta aacaatcaga ggctaagaaa
     2581 gtgagtgttg atgatggtta tacacaaatt ccgaatgagt tattaaaagc aattttgcga
     2641 tcgggtgttt taggttggaa aggctcttac ttactggcta ccgtcttaaa aacattgtct
     2701 tggcataaag aaagtgattg gttcacgcat tcccaagtgt gtgaaatgat gaatattgag
     2761 ccgacaaaat accatattaa tcaactttcc gctgctcgaa aagaacttat ccgtgaaaat
     2821 atcttgtttg aagatggtaa ggaaacaggg gtaaatctca gtgtttttga atggaaaatg
     2881 gtatatcccg aaaaagtagg gagttcccga aataataggg aattaattcc cgaaaaagta
     2941 gggaatgggt atcccgaaaa agtagggaac acaaaagaaa ctattacaaa agaaaaaata
     3001 aataatgaat ttactaacgt aaattctgtg caacagcccg agacctcttt gccgaaaaaa
     3061 acaaaatctg agccggtcga ttatcaagga gtgatggaag aatttaatcg tgctgtggaa
     3121 gacacaccga ttccgcaaat tcgggcgatg agtgatgagc gaaagcgatc ggttcacgca
     3181 ttagcaaaaa tcttgcgaaa agaatttggt ggctacacca gacaacactt tgccgattac
     3241 ttcaatgatt ttgtccgaca ggcaagtagc cggaaagaca gattttattt tggcgggctt
     3301 gatggctcgg cttgggtagc aaatttcggc tacatcattc gttcgaaaac gttttataag
     3361 acttgggaag attcgctatg agccaaaatt tgaaaaatat cacttacgag gttgaatatt
     3421 tgctggttgg agcattgctg aaatccggtc ttaactcgaa agctagggac gtattgagct
     3481 ggttagagcc tgaaatgttc gctacctttc aacttggggt gatttatgag gctatccgca
     3541 agcaggcgtt gaaagataac gtgatcgata tgctgttact caataccgac tacggacaag
     3601 attttgccac gttggcagag ataatgaaaa acacgatcag cggtgcaaac ttagacggct
     3661 atgcagaaaa agtccggcaa tatcatcaac gccgagaagc ccagcgagtg tttttagacg
     3721 ttgcaggtga gttgcaaaat gcccgagacg agcagttaga tgctatcact tcaaccgggt
     3781 tagctcacct aagcaaatta ttacaacgtg gcggaaaagt gaaaccgatt gatatgaatg
     3841 atttgctcga aggttatttg gaattgttcc aagaacgtgc aaaaccaagt tttaaagagc
     3901 gtttgttgtt taccggtata gaagcattag atgggaaact aggcggtatt aacgataccg
     3961 atatttgcat tgtagcagga cgtgccggta acggtaaaac cgaaacagcc atcacgttta
     4021 ctaaaaacat tatcgagaat aaaggttcgg tgctgttctt ctcgctggag atgagcaaag
     4081 agcagattat ggataggctg attgccagtg caagcggtgt aaattcagta aaacttcgca
     4141 atccggaaat gatgaatgat gaagattttg cccgaatggg aacggcgatt cagcctttac
     4201 aaaatcagca gttgtacatt gttgataaaa gcggattaac cgcagaagag attgtggcga
     4261 ttgcagagag ccatattcaa gagtacggca aagtgagtgc ggtagtgatt gattatatcg
     4321 gtttggttcg acacggcaaa ctagacggca aaattaaccg aacctatcaa atcggtgaaa
     4381 gtatggagcg gtttaaaact ttctgcaaaa acaatcacac accgatgatt ttattggcac
     4441 agcttaaccg caatgcagat ggcagtcgcc caaccaacgc agatttgcga gacagtggca
     4501 gtcttgaaca agatgcaagc caaatcatta tggtgcataa ccaacgcaac aaagacggcg
     4561 agccagcccc ctatacagaa tggattgtta ctaaaaatcg ctttggagca aatggcacgg
     4621 tttatatgca attccagcag ggtaggttcg tagaatgcga ccaggcagaa gcgcgggagt
     4681 atttccagcc gaaagaaact aaaacatcat caaacaaacg ctatggagca atgcaatgac
     4741 agattttgat aaaaatataa aatacaaaat tatttacgca gatccgcctt ggaagtataa
     4801 ggatagtggc tgtaatggga gtgcagaaaa ccattacaca acaatgaata tcaaagaaat
     4861 atgtgattta cccgtccaag atatttcaga caaagattct attctgtttt tgtgggttac
     4921 ttaccctatg ttacctgagg gcttaaagtt gattgaggcg tgggggttca actataaaac
     4981 aatagggttt caatgggtga agacaaataa gaagaataag aattcttttt tctttggctt
     5041 gggacgatgg actagaggta ataccgaatg ctgtttaatt gcaacaaaag gaaagccatc
     5101 gagggtaagc aataaagtga gccaattaat tattgagcca atacaacatc atagtaaaaa
     5161 gcctgacatt gtcagagaaa agatagttga gttgatgggt gacttgccaa gaatagagtt
     5221 gttcgccaga aataaaaccc aaggttggga tgtttggggg gatgaggtgt gattgtttca
     5281 agctattgtt acccaaagtg cggtagggtt ttattaaaaa ggttggcggt tgtgaaggat
     5341 aacgaaggtt gggacggttt agatgattac ttataaatgc cccaaatgca acggagagct
     5401 tgaagattta agtattaatg atgaatgggg ttggttttta gatgagccgt atcgttgcaa
     5461 cggacactat acagggcggt ttccaaacat tagccgagat agcacgttaa atcgcacaaa
     5521 atcctgtggg tactttagca aggaagaggt taagaaagta aatggcacac agcgttaatg
     5581 acatcgtaaa agcccacggc aggcgttata aagcaagatt gaaaatacag atgataaaaa
     5641 tgcaaggagg cgttttagtc ccccttaatg agcgtgaagc tgaagcattg gtatcactta
     5701 aaaatggcga gcaatatgaa attgaggtta ttcgcactcg caatccagcc tttcatcgga
     5761 aggtcttcgc ctttttaaat ttttgctttg aatattggtc ggcagacaaa accgaatggg
     5821 agttttttga tgagaggaaa cagtttgata ctttccgaaa aaatctgact gttctggcag
     5881 gatttaaaga aatcacatac accctagatg ggcgtatgcg tgtagaagct caaagtctta
     5941 gttacggaaa tatggaacaa gacgagttcg agcaggttta caaagcattg attaatgcag
     6001 ctatcaagca cgttttcaac aataccaaag atgagaatag gataaatcag ttgtattcgt
     6061 ttttttaatt aaggcgaaat cgccatattt aattaggttt aattgcagga gattaaaatg
     6121 aaaaagaatg ttattagata ttggcttagc gtgccattca gaattattgc agtgcttttt
     6181 ttcttagtca ttcttactgt tagatatgta ggttatttat tgatttatcc attagcattc
     6241 tttgcagcag tcggtagttt tattgttttc tgtcaatgga catatcaaga atggctttat
     6301 tattttaagc gcggttttgc tccgatttag tgtgtgttta ttaattccct cgaattcggg
     6361 ggaaggagaa gtaagatgac aaaatttttt gaaactatcg cattcgtgat gttatttggc
     6421 attattccaa gctgtttgtt ggcgattaat actactttaa tgaatatgaa tattaaaaac
     6481 gcaccgtggt ttatggtgat tattcagtta ggttttaata tcacttgtta ttggttgtgg
     6541 tttatttctg ttatgcggaa tgttatttaa ggagattaat aagtgagcca gtgcaatgaa
     6601 ctgactgtaa ttttaatcgc catcgctatt cttagtgtat gtgccggttc actctttttt
     6661 attgagtggt ttgataagag agatggtgag ggttggaatg gctaacaaac cacctaaaca
     6721 acacaaatgc aaagagtgcg gcagttatta catcaaattt caaagcacgc agcaggtctg
     6781 ctctgttaag tgtgctatgg caatgggtaa gcgtaagaca gaggcgaaac gcaaaaaaag
     6841 tgcaaaaatc gaccgcttgg agcaacggaa gcggctggaa aaattgaaaa gccgtagaga
     6901 ttttgagaaa gatttacaaa agatatttaa taaattcatt cgcttgcgtg ataaagattt
     6961 accctgtatt tcctgtggcc gctatcatca ggggaaatat gatgcagggc attataaaac
     7021 cgttggtggt aatcctgagc tacgttttaa tgaagataat tgccacagtc aatgtgtgcc
     7081 gtgtaaccga catctgcacg gcaatattgt gaattatcga gtaaatctga ttgagaaaat
     7141 cgggcttgag cgtgtggaat ttttagagcg taaagaccac ccaccattaa aacttactat
     7201 cgaacaaatc aaagatttaa tcaaagtcta taaagcgaag tgcaaggagc ttgagcgtgt
     7261 tacctagaaa aattaaaaac aagtggttag agcctgaaaa gcagaaatgg atcgaagagt
     7321 tgctaaggtt atggggggcg tgggaatttg gcggattgga tttagaaagt cgggtaaata
     7381 tgatttaccg gctgatgaaa tctgcggagg gggttaaaag tctttcatct agagaggttt
     7441 gtaacgatag cctcggcacg ctgatcaatg agatttttac ggtagtcacc aaaagagacg
     7501 taatgttagc cgatatactc aaacaaaaat actggttcgg gcgttcggag cggcaaatcg
     7561 ctatttatta tcaactaagg gacagcgagg gtagaaaaga aagacgatgg caagaaatta
     7621 ttcaagataa atgcaaaaaa gcggaaagaa ttattgcaga tattcttgaa agcaagattt
     7681 catccagtaa ttctacagat aaactgaaaa aatatcaatt ttccccttga ttttagtgcg
     7741 taacaagtgt atattttgtg ctaatggtgg acgtagtata aatgatgttt accaatgtta
     7801 gttaaagacg cagcctgaag taatattcag ttcggaggag aataactaga aacgacgtcg
     7861 agtatagtta tttcagcgtt tgcgtggcag tatgccgacc gaattagttt aacagccctg
     7921 agcagaaatg cttggggctt ttttgtttac ggattttaag ggtgtagctc agttggtaga
     7981 gcagcggtct ccaaaatcgt tggttgttgg tttgagtcca accacccttt ccaaatgcga
     8041 gtaaatgtta tgtataacct tgatgatgca attcaagaat gcagagaaaa atttggtgaa
     8101 gataagcctt atttttctga agctggaaca cttacttttg ctggttgcaa agccctctct
     8161 cgattaagag atgaaaagtt aggaattaag gctccgccaa atttcccttt cccaagggtt
     8221 gaagatctat cttagctaca aaaatcaatg agggattgct atgacggaac aactaaatac
     8281 tcagtcaaaa agcggtgaag aagatcaaga aaaatctcaa gatcgctatg ccgtgggctg
     8341 gccatctcga cgtatatcag attgcgttca gcacttccga agtaggaaaa tttatccatt
     8401 tgccagtaat aatgacgtga agcaaggtta aatgcttctg gtggtacaga gtaaattcaa
     8461 tcatttttac cctctgctag tttatttgtt ggggaacagt attctagcag aatttttaac
     8521 caaagctcag tctcacgact gggctttttt attgcctcga aacggggtgg agtatgaagt
     8581 taatgaaaga tatgggaacg cagagctata tttggtcggg atttagcact tggctggcgt
     8641 ggctcggcga acagcagaat ttaatgttac ttagtcttgc tatcggtatt gttactgcca
     8701 ttgcagggct tattcagcga tttgatgaat ggcgtaggcg taagcgtgaa gatgagcgag
     8761 cggaagagct tcatcaagcg aaaatggcaa gattgagaaa ggggttaagt gatgagtaaa
     8821 agccttaaat atggcagtgg tatcgtttgt ggtatcgctg ccattattac attagtccaa
     8881 tatcaacatc ccgaaatccg cactaaccaa gctggattag agattatcgg taatgctgag
     8941 ggttgcagac gtgatccgta taaatgccct gccgatgtaa tcacggttgg cattggctca
     9001 acggagtttg gcggtgaaaa gattgaccca aatcgtattt attctgacaa agaaattgct
     9061 gagcgttggg caaaagattt gaagattgcg gagagttgtg tcaatcgtca ttttaatggt
     9121 aaagacatga acgataatca attttcggga atgacgtccg ctgtatttaa tatgggttgt
     9181 tataacatga gattttatcg gaataaacaa ggtcaatatg tgcagactac catccataaa
     9241 ctcgcagtga ataaacaatt tgaggagatg tgtcatcgac tacctgactt tattcgtgcc
     9301 agtggtaagg tattgaacgg attggttatc cgccgtgaaa aggagaaagc attatgctta
     9361 actggattag tggcacgata gccattgtga ttttgggctt gtgtgtatgg ttatggggtc
     9421 agtcacagat gatagatagc ttaagagctg agaaccgcgc acaagcccaa accattgagc
     9481 agcagcaaaa agccaatcaa cggctaaccg atagcttaga gcaagagcga caagcggtcg
     9541 aaaaaatcca aaaaattgca aatgagctgc ggaataaagt ggagatggcc aagaatgaaa
     9601 ttacatcaat actggcacaa gacagttgtg ctaaagctga tttgcctaat ggcgttgctg
     9661 atagcattaa gcggctgcac cagcagaaca atcacaagca ctgagtattt gtatccgccg
     9721 gcagcttacc ttgtgccgtg tgggcgaaca gaatttagcg gtagaaccta tggcgatacg
     9781 gttgagtatc tcgtcaaagt gatgggagag cgtgatttgt gtgctaatca aattgaccgt
     9841 atcagagaat ggcaagcaca aaccaaacaa gggtttaaat agctaattat ctaattaacc
     9901 gctattgaaa atgggagcgt aacagctccc tttttgtttt gatggaaagt aaatattaca
     9961 taatttagct atggtttcgg ggttggttgg ataaaacacc gaggaaatac ctaagtgatg
    10021 tgatttatat aaaacaaaac cccgaacatt tgcggtgttc gaggtttttt tattacccat
    10081 tgaaacggaa tgagtaacaa gttatggaaa ttattacatt tttaaccgta accatcaagg
    10141 agattcttat ggaatatggt ttatggcaaa taagcctagc agtaacagtc cctattttgg
    10201 cgttcgtgtc gccaaagctg attaatgcta ttgctaatct attaaatgca atgaagtaaa
    10261 ggaatttaac ccaatgacta aaaaaggcga ggttaaagcc acgtctaaag gcgtgggtaa
    10321 attaaccgat aaacagaaac gatttgtaga agagtatctg attgacttga atgcgactca
    10381 agctgcgatt agagctgggt acagcgaaaa aacagcatac tcaatcggag aagagaacct
    10441 gagaaaacct gaaatcagaa gtgcaattca ggaggctcaa aataaacgct cggagagaac
    10501 ccaaattaca caagatgatg tgctaaatgg gttgcttgaa gtgattgcaa tgagtactgg
    10561 taaaaaaatt gtgacagaaa ctgatgttgc aaaaaatgac aatggtgagt tggtcggttt
    10621 tgatattgca aaaacaaaat tcgaacctgc cgccgcaaat aaagctcttg agttactcgg
    10681 taaacattta ggaatgttta aagacaaggt tgatttaatt aattctgatg gttcactgaa
    10741 tcgaccgatg gtgattgaat taattgctcc gagtttagac gatgaaagca cagattgaac
    10801 taccacctaa actgttgcct gtttttgcca aagattatcg ttacaaaggt gcttatggtg
    10861 ggcgaggttc aggcaagact cgggcatttg ccaaaatgtc ggcagtgtct gcttataaaa
    10921 gagcaatgcg aggggaaagt ggcgttattc tttgcggtcg tgagtttatg aactcattgg
    10981 aagaaagctc tcttgaagaa gttaaacagg cgatcaagtc tgagcctttt ttagcaaatt
    11041 tttttgatgt cggcgagaag tatgttcgca ctaaagatgg gcggatttct tatgtgtttt
    11101 ccggacttcg gcataactta gatagcatca aatctaaagc ccgtattttg attgcgtgga
    11161 tagatgaagc agaaacagta agcgaaactg cttggcggaa attaattcca accgtgcgtg
    11221 agaataattc cgaaatatgg gtaacttgga acccggaaaa tagagggagc gcaacagata
    11281 ctcgcttcag gcaaaatcca cctgaaaaca gctgcataat tgaaatgagc taccaagata
    11341 atccttggtt tcctgatgtg ctcgagcaag agcggctaaa tgacaaacag cggcttgatg
    11401 atgc
//
LOCUS       DANMCL010000090        11318 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.091, whole genome shotgun sequence.
ACCESSION   DANMCL010000090 DANMCL010000000
VERSION     DANMCL010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11318)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11318)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11318
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.091"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            276..1820
                     /gene="leuA"
                     /locus_tag="PXF40_002198"
     CDS             276..1820
                     /gene="leuA"
                     /locus_tag="PXF40_002198"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HDL5803494.1"
                     /translation="MSNNNIIIFDTTLRDGEQSLKASLTVKEKLQIALALERLGVDVM
                     EVGFPVSSAGDFESVQTIARHIKNSRVAALSRAVAKDIDAAYEALKVAEAFRIHTFIA
                     SSALHVEAKLKRSFDDVVEMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAI
                     NAGATTVNIPDTVGFCLPNEYGNIIHQVMNRVPNIDKAIVSVHCHNDLGMATANSLTA
                     VQNGARQIECTINGIGERAGNTALEEVVMAIKTRQEFMGVDTRINTQEIHRVSQMVSQ
                     LCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSG
                     RAAVKGHMADMGYTETDYDLDKLYEAFLQLADKKGQVFDYDLEALAFIDMQQGDEDRL
                     KLDVITTQLISGLPASAFVQVELDGVRQSATSQGGNGPVEATYNAIMNIVGMELKMSH
                     YNLTAKGEGAEALGQVDIVVEYEGRKFHGVGLATDIVESSARALIHAINAIYRSQKVA
                     DLKAKK"
     gene            2042..2614
                     /gene="rpoE"
                     /locus_tag="PXF40_002199"
     CDS             2042..2614
                     /gene="rpoE"
                     /locus_tag="PXF40_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000003307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HDL5803495.1"
                     /translation="MSEQITDQELVEKAQKGDKKAFNLLVVRYQNRVAGLLTRYVARD
                     DIPDIVQESFIKAYRSLESFRGESAFYTWLYRIAVNTAKNHLTSLGRRPPKEDILAED
                     AESYDVGAQLRESDTPENLILSEELKKVVFDTIENLPDELKTAIRLRELEGLSYEEIA
                     EVMECPVGTVRSRIFRAREAIDAKIKPLMQ"
     gene            2660..3283
                     /locus_tag="PXF40_002200"
     CDS             2660..3283
                     /locus_tag="PXF40_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5803496.1"
                     /translation="MQERITQQNERLSAYMDGQNVDTAFVETLTNSPELQQKWASYHT
                     IRSVMQGDEIILGRDFSAKMEALLENEEIESQANVEKPKGLLLKLKRWGTPIMQAGIA
                     ASVCLVAVLGVNSMNASDEIAQTQQPVLQTLPFSNSVEAVSYNAPVQDQPTEEQLELQ
                     QRKINALLENHELQRRTNNVKNLTLSEEEKQKAQTSSNTESEPNIQK"
     gene            3441..4424
                     /locus_tag="PXF40_002201"
     CDS             3441..4424
                     /locus_tag="PXF40_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucB/RseB C-terminal domain-containing protein"
                     /protein_id="HDL5803497.1"
                     /translation="MLFKIKKYLLLFWVISACYTFAWAESTIKTPLAYLTAMSEAHKK
                     STYELVYILQQGSDTESFRLRHAFTHNKEYAQLLNLDHSREEIILKNNKVSYLGYNFR
                     PFSLNSSQILDNLPNVLYTDYANLKGYAFLDAGKDRISDRITKVIRMKPNDTLRYAYI
                     LWIDEETHLLLKSQVLNMDNLVLEEFRVLQLYQSPELDRIANVIESLMLPTLTTVKKE
                     EFPKSDGWQVKWLPTGFRLIQQQTVTGATYQVESEYVDSRVYSDGLSTLTIYIMPSQG
                     VSFNEYAWQQGKLTILNQTINDRDIVIIGDVPLQSAKQIMNNIGFKEGAQP"
     gene            4421..4885
                     /locus_tag="PXF40_002202"
     CDS             4421..4885
                     /locus_tag="PXF40_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR reducing system RseC family protein"
                     /protein_id="HDL5803498.1"
                     /translation="MMIEQATVVEYQNGVAIVQCYAKSSCGGCVAQSACGSKALSALA
                     GEKIDPRFRIEVDEPLKVGDKVELGLAENILLKSVFLIYGIPLLVLVMTAVGFSQFFA
                     NELIVLFIMLLSTGITFWAVRKLIHKHSKQANFSPIFLGKVLGDYNGKNMAK"
     gene            4863..6548
                     /gene="fadD"
                     /locus_tag="PXF40_002203"
     CDS             4863..6548
                     /gene="fadD"
                     /locus_tag="PXF40_002203"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HDL5803499.1"
                     /translation="MEKIWLNNYPPYSPKTIETDQYESLVEMFEAAIQRHPDIPAYIN
                     MGQVLTFRKLEERSRSFAAYLQNELRLKKGDRIALMMPNLLQYPIALFGALRAGLVVV
                     NVNPLYTPRELEHQLNDSGAKAIVIVSNFAATLEKIVFNTEIKHVILTRMGDQLSFGK
                     RTLVNFVVKYIKKLVPKYKLPHAVSFREALSIGKQRQYVKPNIVSQDLAFLQYTGGTT
                     GVAKGAMLTHQNLIANMMQAKWIVEPLLGNSANMIGLVPLPLYHVLALSMNCLLFIEL
                     GLTGLLITNPRDIPGFIKELKKYKVSVITGVNTLFNALLNHESFKEVDFSHLKLSVGG
                     GAAIQSSVAKRWHDLTGVHIIEGYGMTECSPLISATRGDSVEYSGSIGVPVPNTDIRI
                     VDDEGKEVPLGERGELVVKGPQVMQGYWNRPDETAQVLQDGWMATGDIVVMGDDLNLR
                     IVDRKKDMIIVSGFNVYPTEIEEVISQNPKVNEVVAIGVPSEASGESIKIFVTKKDES
                     LTRDELRTYCRQFLTGYKIPRDIEFRDELPKSNVGKILRRVLRDEELAKVNKA"
     gene            6573..7202
                     /gene="upp"
                     /locus_tag="PXF40_002204"
     CDS             6573..7202
                     /gene="upp"
                     /locus_tag="PXF40_002204"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HDL5803500.1"
                     /translation="MKIVEVKHPLVKHKLGLMREAEISTKDFRELANEIGSLLTYEAT
                     KDLEMESVEINGWSGEKIAVERIKGKKVTVVPILRAGLGMMDGVLEHIPSARISVVGI
                     YRDEETLKPVPYFSKLANDVDERLAIITDPMLATGGSMVATIDLLKKAGCKQIKVLVL
                     VAAPEGIKVLEAAHPDVELYTASIDSHLNENGYIIPGLGDAGDKIFGTK"
     gene            complement(7313..8179)
                     /gene="rsmA"
                     /locus_tag="PXF40_002205"
     CDS             complement(7313..8179)
                     /gene="rsmA"
                     /locus_tag="PXF40_002205"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HDL5803501.1"
                     /translation="MSSTNSKKHLGHTARKRFGQNFLHDMNIIHSIVSAINPKNGQFL
                     LEIGPGLGALTEPVAELVDKLTVVEIDRDLAERLRHHPFLNQKLTIIEQDALRFNFRD
                     YFNQLNLDEDSVRVFGNLPYNISTPLIFHLLTFHDLIQDMHFMLQKEVVKRLCAAPNS
                     KAYGRLTIMAQYYCQVIPVLEVPPTAFKPAPKVDSAVVRLVPYNQLPYPAKDVYWLNR
                     VTTQAFNQRRKTLRNALSTLFSAEQLDALGVDLTARAENLTIADYVRLANWLHDNPPA
                     IDTTEELVDEDC"
     gene            complement(8241..9191)
                     /locus_tag="PXF40_002206"
     CDS             complement(8241..9191)
                     /locus_tag="PXF40_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5803502.1"
                     /translation="MKMKLVKSLFAVAVATMSLTQTAHAFEERVVALVNDTPIMQSQV
                     QRVLGKKKATETAQRAAIDQVIDDMLVQQAMKEAGVKVSPAAVNQAVENVAIQNGITY
                     GQLLDALDYQGITLEQFKRNIAQQMAMEQVRHISISKSIQVAPQQVQALAKELMAKDK
                     AAGKLKTVSGKEHRISHILLKTNPILNDAQAKAKLSSLTTDINSGKISFEEAAKTHSV
                     DYASGADGGDLGFNFLEIYDPAFANVASKIKPNQISAPFKSQFGWHILKVTDTRNGDR
                     TEDAYHQRAYQQLVNKQAEEASKDWVKALRKTANIQYVGQ"
     gene            complement(9264..9818)
                     /gene="pyrR"
                     /locus_tag="PXF40_002207"
     CDS             complement(9264..9818)
                     /gene="pyrR"
                     /locus_tag="PXF40_002207"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HDL5803503.1"
                     /translation="MAREKIIIDTEQFQRTISRISHQIIEKHGDLQDVVIVGIKRRGA
                     EIAELIQKRIEDLAQTRLPYMALDITFYRDDLDLIYQDPVFMGADNQLNLNGKKVILV
                     DDVLFTGRTIRAALDALLDFGRAARIELVIFVDRGHRELPIRADYVGKNIPTAKNEQI
                     QVQTLSYDGINQVVLVPAANKESA"
     gene            complement(9832..11259)
                     /gene="hldE"
                     /locus_tag="PXF40_002208"
     CDS             complement(9832..11259)
                     /gene="hldE"
                     /locus_tag="PXF40_002208"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HDL5803504.1"
                     /translation="MMMQYSPKFNNAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKV
                     QDIEERAGGAANVAMNIASLGVPVTLHGLIGDDDAGRALDKLLNSHQIQNHCVVINSH
                     PTITKLRILSRHQQLLRLDFEEGFHNVDSTALLAKLSQEITAYGALILSDYGKGTLES
                     VQQMIQIARNAKVPVLIDPKGTDFERYRGATLLTPNMSEFEAVVGHCKDEDEIVSKGL
                     KLIADYDLSALLVTRSEKGMTLLRPNHEPYHLPTQAKEVYDVTGAGDTVISVLATAIA
                     DGRAYEEACYLANAAAGVVVGKLGTSTVSPVELENAIHQRTATGFGVVSEAELKAIVE
                     EAKKRGEKIVMTNGCFDILHPGHVSYLENARKLGDRLIVAVNTDASVKRLKGEARPIN
                     DLAARMAVLAGLASVDWVVPFDEDTPQRLISEILPDLLVKGGDYKPEEIAGSQEVWAN
                     GGDVRVLNFENGCSTTNVIKKIQAL"
BASE COUNT         3450 a         2151 c         2446 g         3271 t
ORIGIN      
        1 aattaatggg ctggtaaacg gttgcgtgaa gagaaaaatg ctattgacat tgatttggat
       61 aaggataata tacacctcaa ctactgaata acaatgcaaa cataaacata caacacaaca
      121 tggaaaaatt taccttactc cgattatctc tgttatcgta ttttgtgcga ggataaagat
      181 tgattggaaa aagtaaatgg actatccaca ttcttgcccg caccttaaaa tgcgggcttt
      241 ttttatcaaa taaaaacacc taaaaagagg cttctatgag caacaataac attattattt
      301 ttgatacgac tttacgtgat ggtgagcaat cattaaaagc aagtttaacc gtaaaagaaa
      361 aattgcaaat tgcccttgct ttagaacgtt taggggttga tgtgatggaa gtcggttttc
      421 cagtttcttc agcgggcgat tttgaatcag tacaaaccat cgctcgtcat atcaaaaaca
      481 gccgggtggc ggcgctttcc cgagcggttg caaaagacat tgatgcagct tatgaagcct
      541 taaaagtagc agaagcattc cgtatccata cctttattgc cagctcggca ttacacgttg
      601 aggctaaatt aaaacgttca tttgatgatg tagtcgaaat ggcggttgca gcggtaaaac
      661 gcgccagaaa ttatactgat gatgttgagt tttcctgtga agatgctggg cgtactggaa
      721 ttgataacat ctgccgcatt gtagaagctg ccattaatgc cggtgcaacc acagtgaata
      781 ttccggatac agtcggtttc tgtttaccga atgaatacgg caatattatc caccaagtga
      841 tgaaccgtgt tccgaatatc gataaagcga ttgtctctgt tcactgccat aacgatttag
      901 gtatggctac cgccaactca ttgacagcgg tgcaaaacgg agcgagacag attgagtgta
      961 ctatcaacgg tattggcgaa cgtgccggta acaccgctct tgaagaagtg gtaatggcaa
     1021 ttaaaacccg ccaagaattt atgggggttg atacccgcat taatacccaa gaaattcacc
     1081 gtgtcagcca aatggtcagc cagctttgca atatgccgat tcagccgaac aaagcgattg
     1141 tcggtagcaa tgcctttgct cactcttcag gtattcacca agacggtatg ctgaaaaata
     1201 aaaatactta tgaaattatg tcgccggaaa ccatcggctt gaaaaaagag aagctgaatt
     1261 taactgcccg ttcaggtaga gcagcggtga aagggcatat ggctgatatg ggttatacgg
     1321 aaacggatta cgatttagat aaactttatg aggccttctt gcaacttgct gataaaaaag
     1381 ggcaagtgtt tgattatgac ttagaagctc ttgccttcat tgatatgcag caaggcgatg
     1441 aagaccgctt aaaattagat gtaattacca cccaactaat cagcggttta ccggcttcgg
     1501 cttttgtaca ggtggaatta gacggcgttc gtcaaagtgc tacatctcaa gggggaaatg
     1561 gtccagttga ggcaacttac aatgccatta tgaacattgt gggaatggag ctaaaaatgt
     1621 cgcactataa tctgactgcg aaaggcgaag gagcagaagc attagggcaa gtggatattg
     1681 tagtggaata tgaaggtcga aaattccacg gtgtgggttt ggcaaccgat attgtggaat
     1741 cttcagcccg agctttaatt cacgccatta atgcgattta ccgttcacaa aaagtggcag
     1801 atttaaaagc gaagaaataa cttatagagc gaaagcataa catagacaag cggtcggatt
     1861 ttttgaaatt tttgcaaaat ttcgctaaaa tccgaccgct tgcttagttt attaagtagg
     1921 ttttatctag gaatgtaaaa aattacacaa tttttcaaat tttttgaact tttgtcataa
     1981 agcacacact aacaaagtgt gcaatggaaa atgacatatt gatatttagg agagtccgca
     2041 gttgagcgaa cagatcaccg accaagaatt agtcgaaaaa gcacaaaaag gtgataaaaa
     2101 agcatttaat ttacttgttg tacgttatca aaatagagta gccggtttgc tgactcgtta
     2161 tgttgcaaga gatgatattc cggacattgt gcaagaatct tttattaaag cctatcgttc
     2221 tttagagtct ttccgtggcg aaagtgcttt ttatacgtgg ctttatcgca ttgcagtgaa
     2281 tactgcgaaa aatcatttaa cctctttagg cagaagaccg ccaaaagaag atattcttgc
     2341 cgaagacgct gaaagttatg atgtaggcgc gcaacttcgt gaaagtgata cgccagagaa
     2401 tttgatatta tccgaggaat taaagaaagt cgtgtttgat acgattgaaa atttacctga
     2461 tgagcttaaa accgccattc gtttaagaga attggaaggg ctaagttacg aagaaatcgc
     2521 agaagtgatg gaatgtccgg ttggtactgt acgttcccgt attttccgag caagggaagc
     2581 gattgatgct aaaatcaagc cacttatgca atagatagaa agattatttt agaagagatt
     2641 taaatcattg gagtcaatta tgcaagaacg catcactcaa caaaatgaac gcctttcagc
     2701 ttatatggat gggcaaaatg ttgatacagc atttgtagaa acattaacta acagccctga
     2761 attacagcaa aaatgggcaa gttatcacac tattcgtagt gtgatgcaag gtgatgagat
     2821 cattttaggg agagatttct ctgctaaaat ggaagcatta ctggaaaatg aagaaattga
     2881 atctcaagca aatgtagaga aacctaaagg cttattgctc aagctcaagc gttggggaac
     2941 tccaattatg caagccggta ttgcagcttc agtgtgctta gttgcggtat taggggttaa
     3001 ttcaatgaat gcgagtgatg aaatagctca aacgcaacaa ccagtattac aaacattgcc
     3061 atttagcaat tcagttgaag cggtaagtta taatgcgcca gttcaagatc aaccaacaga
     3121 agaacagtta gagcttcaac agcgtaagat taatgcgtta ttagaaaacc atgagttaca
     3181 acgccgtact aataacgtta aaaatttaac cttatctgag gaagaaaagc aaaaagcaca
     3241 aacttcttcc aatacagaat cagagccaaa tatacaaaaa taataggtaa aataagttac
     3301 tgaaagccac ataatttatc cataattatg tggctttttg tatgtaaatg tagcgaaaaa
     3361 ataagaaata accaacaagt agcgaaatag tgaaaatttt ttgctaaaat aacctaagtt
     3421 aatttggctt gagaataaat atgcttttta agataaaaaa atacttattg ttgttttggg
     3481 ttatttctgc ctgctataca tttgcttggg cagaatcaac tattaaaaca ccattagcat
     3541 atttaacggc tatgtcagaa gcacataaaa aatccactta tgaattagtt tatattcttc
     3601 aacagggaag tgatacagaa tctttccgtt tacgtcatgc ttttacccat aataaagaat
     3661 atgcccaatt actgaattta gatcacagcc gagaagaaat tattttaaaa aataacaagg
     3721 tcagctattt ggggtataat tttcgtcctt ttagtttaaa tagttcacag attttagata
     3781 acctccctaa tgtactttac acagattatg caaatttaaa aggttatgcc tttttagatg
     3841 ctggtaaaga tcgtatttct gaccgaatta caaaggtaat tcgtatgaag ccaaatgata
     3901 ctttaagata tgcctatata ctatggattg atgaagaaac acatttatta cttaaaagcc
     3961 aagtcttgaa tatggataat ttggtattag aagaattcag agttttgcaa ctttatcaat
     4021 ctccagaatt ggataggatt gcaaatgtaa tagaatcact aatgttacca acattaacga
     4081 cagtgaaaaa agaagaattt cctaagtctg atggttggca ggtgaagtgg ttgccgacag
     4141 ggtttaggtt aattcagcaa caaacagtca caggtgcgac atatcaagtg gaaagtgagt
     4201 atgtagatag cagagtatat agtgatggtt tatctacatt aactatttat attatgccta
     4261 gccaaggcgt gagttttaat gagtacgctt ggcaacaagg taaattaacg attttaaatc
     4321 aaacgattaa tgatagagat attgtgatta ttggtgatgt gccgttgcaa tcggctaagc
     4381 aaattatgaa caatattggt tttaaggaag gagctcagcc atgatgatcg aacaggctac
     4441 ggtggtggaa tatcagaatg gtgtggctat tgtacaatgt tatgctaaaa gtagctgtgg
     4501 tggctgtgta gctcagtctg cttgtggcag caaagcatta tcagcattag caggtgaaaa
     4561 aattgaccct cgttttcgta ttgaggtaga tgaaccccta aaagtaggcg ataaggttga
     4621 actagggtta gctgaaaata tcttgctcaa aagcgtgttt ttaatttatg gcattcctct
     4681 gctggttctt gtgatgacag cggtcggatt ttcgcaattt tttgcaaatg agcttattgt
     4741 tttatttata atgttgcttt caacaggtat aacattctgg gctgtaagaa aattgattca
     4801 taaacacagc aaacaagcaa atttttcacc tatcttttta ggtaaggttt taggagacta
     4861 taatggaaaa aatatggcta aataattatc cgccttattc accaaaaacg attgaaacag
     4921 atcaatatga atctttagtg gaaatgtttg aagcagcgat acaacgccac cctgatattc
     4981 cagcttatat taatatgggg caggttttaa cgttccgtaa attggaagaa cgtagccgct
     5041 cgtttgccgc ttatttgcaa aatgaattac gcctgaaaaa aggtgatcga atcgcattga
     5101 tgatgccgaa tttattgcaa tatccgatcg ctttatttgg cgcattacgt gccgggcttg
     5161 tggtggtgaa tgtcaacccg ctttatacgc cgcgtgaatt agaacatcaa ttaaatgaca
     5221 gtggtgcgaa agcgattgtg atagtctcga acttcgcggc taccttagaa aaaattgtct
     5281 ttaatactga gattaagcac gttattttga cccgaatggg cgaccaactt tcattcggca
     5341 aacgcacctt agtcaatttt gtggtgaaat acatcaaaaa attagtgccg aaatataaat
     5401 tgccacatgc ggtcagcttc cgtgaagcct taagcattgg caaacagcgt caatatgtaa
     5461 aaccgaatat tgtcagccaa gatctcgcct ttttacaata cactggcggt actacaggtg
     5521 tagcgaaagg ggcaatgctg actcatcaaa acttaattgc taatatgatg caggcaaaat
     5581 ggattgttga gccattgttg ggtaattctg ccaatatgat tggattggta cctttaccgc
     5641 tgtatcacgt cttagcactt tcgatgaatt gcttgctctt tatcgaatta ggacttaccg
     5701 gattattaat tactaatccg cgcgatattc caggctttat taaagaatta aaaaagtaca
     5761 aagtttcagt gattactggg gtaaatacat tgtttaatgc attacttaat cacgaaagtt
     5821 ttaaagaggt tgatttttca cacctaaaat taagtgtagg tggcggtgca gcgatccaat
     5881 ctagcgtggc aaaacgctgg cacgatttaa ccggcgtaca tattatcgaa ggttatggaa
     5941 tgacagaatg ttctccgctg attagtgcaa cccgtggcga ttcggtggaa tattccggct
     6001 ctattggcgt gccagtgcca aatactgaca ttcgtattgt ggatgatgaa ggcaaagaag
     6061 taccactcgg cgaacggggc gagctggtgg tgaaagggcc gcaagtaatg caaggctatt
     6121 ggaaccgtcc tgatgaaacg gcacaagtgc tacaagatgg ttggatggca accggtgaca
     6181 ttgtggtaat gggggatgat ctgaacttac gcattgttga tcgtaaaaaa gatatgatta
     6241 ttgtctccgg ttttaatgtg tacccaaccg aaattgaaga agtgatttcc caaaacccaa
     6301 aagtgaatga agtagtggcg attggtgtgc cgagtgaggc ttccggcgaa agcattaaaa
     6361 tttttgtaac caaaaaagat gaaagtttaa ctcgagatga attgagaacc tattgtcgtc
     6421 aattcttaac cggctacaaa attccaagag acatcgaatt ccgtgacgaa ttaccaaaaa
     6481 gtaatgtcgg caaaattctt cgccgagtgt taagagacga agaattagca aaggtgaata
     6541 aggcttaaat tacactaatt aaggagctta aaatgaaaat tgttgaagta aaacacccac
     6601 ttgtaaagca taaattgggc ttaatgcgtg aagcggaaat cagcaccaaa gatttccgtg
     6661 agctagcgaa tgaaattggt agtctgctta cttacgaagc aaccaaagat ctggaaatgg
     6721 aaagtgtgga gatcaatggc tggagcggag agaaaattgc ggttgagcga attaaaggca
     6781 aaaaagtgac tgttgtgccg attctgcgtg ctggcttagg tatgatggac ggtgtgttag
     6841 agcatattcc aagtgccaga attagtgtgg ttgggattta tcgtgacgaa gaaaccttaa
     6901 agcccgtgcc gtatttctcc aaactagcca acgatgttga tgagcgttta gccattatca
     6961 ccgacccaat gcttgcaacc ggtggctcaa tggtagcaac cattgacctc ctgaaaaaag
     7021 caggctgtaa gcagattaaa gtgctagtgt tagttgccgc tccagagggg attaaagtat
     7081 tagaagccgc ccacccagat gttgaactct acaccgcctc aatcgatagt cacttaaacg
     7141 aaaacggcta tatcattcca ggcttaggcg atgcagggga taaaattttc ggcaccaagt
     7201 aacatcaaaa ctaagtaaca gcaaaacaag taaagctgat ttaaacaagc ggccattttt
     7261 cactaaagat ttgcaaatct tggtagaaaa atgaccgctt gtaatttatt gattagcaat
     7321 cttcatcaac caattcttcg gttgtatcaa ttgccggcgg gttgtcgtgt agccagttag
     7381 ccaaacgcac ataatcggca atggtaaggt tttccgctcg ggcggttaaa tcaacgccta
     7441 aggcgtccag ttgctccgca ctaaacaggg ttgaaagagc attgcgtaag gttttacggc
     7501 gttggttaaa ggcttgagtc gtgacccgat tgagccaata cacatctttt gccggataag
     7561 gcagttggtt ataaggcact aaacgcacta ccgcagaatc gacttttggt gccggtttaa
     7621 aggcggttgg cggcacttcc agcaccggaa ttacttggca atagtattga gccataatgg
     7681 ttaaacgccc gtatgcttta ctgtttggcg cggcacataa acgtttcacc acctcttttt
     7741 gcaacataaa gtgcatatct tgaattaagt cgtgaaaggt cagcaggtgg aatatcaagg
     7801 gcgtagaaat gttgtaaggt aagttaccaa acacacgcac cgagtcttcg tctaagttga
     7861 gttggttaaa atagtcacgg aaattaaagc gtagggcatc ttgctcaata atggtgagtt
     7921 tttggtttaa aaacgggtgg tggcgtaaac gctctgctaa atcacggtca atttcaacca
     7981 ccgtgagttt atctaccaat tcggcaaccg gctcggttaa tgctcctaaa cccggaccga
     8041 tttctaataa aaattgtccg tttttcgggt taatggctga aactatgctg tgaataatgt
     8101 tcatatcgtg caaaaagttt tgcccgaaac gcttacgagc ggtatgacct aaatgttttt
     8161 tggaatttgt agaactcatt gttatccttt ttgaaataag aaaagaaccc cgcattatgc
     8221 gaggttctta aaaattttaa ttattgaccg acatattgaa tattggcggt ttttctaagc
     8281 gcttttaccc aatctttaga ggcttcttcg gcttgcttgt tcaccagttg ctgataagca
     8341 cgttggtggt aagcatcttc ggttctgtct ccgttacgag tgtcggtgac ttttaaaata
     8401 tgccaaccaa attgcgattt aaacggagca gaaatttggt ttggtttgat ttttgatgca
     8461 acattcgcaa atgccggatc gtaaatttct aagaagttaa aacctaaatc tccaccgtct
     8521 gcccctgagg cataatcaac agaatgggtt tttgccgctt cttcaaagct gattttgcct
     8581 gagttaatat cagtagttaa gctgctaagt tttgctttgg cttgagcatc atttaaaatc
     8641 gggttggttt tgagcaaaat atgactaatg cgatgctctt tgccagaaac ggttttcaat
     8701 ttgcctgctg ctttatcttt cgccattaac tctttcgcca gagcttgcac ttgctgtggt
     8761 gcaacctgaa tcgatttgct aatgctgata tggcgaactt gttccattgc catttgttga
     8821 gcaatattac gtttgaattg ttcaagtgta ataccttgat aatctaacgc atctaataac
     8881 tgaccgtaag taatgccgtt ttgaattgct acattttcaa ccgcttggtt taccgcagct
     8941 gggctgactt taacgccggc ttctttcatt gcctgttgca ccaacatatc atcaatcact
     9001 tgatcaatag ccgcacgttg agcagtttct gtcgcctttt tcttgccaag cacacgttga
     9061 acctggcttt gcataatagg ggtatcattc actaacgcca ccactctttc ttcaaatgcg
     9121 tgggcggttt gggtaagact cattgttgca acggcaacag caaataatga tttgactaat
     9181 ttcattttta taacaatcct aatggaggta attaagcagt aacttttcct tagagataag
     9241 tttagcgaaa aggttcactt aatttaagca ctttctttat tggcagcagg aactaagacc
     9301 acttggttaa tcccatcata cgagagcgtt tgcacctgaa tttgctcgtt tttagccgtt
     9361 ggaatatttt ttccgacata atcggctcgg ataggcaatt cccgatgacc tctatcgaca
     9421 aaaatcacca gttcaattct ggcagctctg ccaaaatcta agagtgcatc aagtgccgcc
     9481 cgaatggttc tgccggtaaa cagaacatca tcaaccaaaa tcactttttt accgttcaga
     9541 tttagctgat tatcggctcc cataaatacg ggatcttgat aaattaagtc taggtcatca
     9601 cggtagaacg taatatctaa cgccatataa ggcaagcgtg tttgagctaa atcttcaatg
     9661 cgtttttgga ttaactcggc aatttcagct cctcgacgtt tgatgccgac aatcactaca
     9721 tcttgcaaat caccgtgttt ttcaataatt tgatgtgaaa tacgagatat tgtgcgctga
     9781 aattgctcgg tatcaataat gattttttct ctcgccattc gcttattacc attatagtgc
     9841 ttgaattttc ttgatcacat tagtggtaga acagccgttt tcaaagttca atactcgcac
     9901 atcgccgccg tttgcccata cttcttggct gccggcaatc tcttccggct tgtaatcacc
     9961 accttttacc aataaatcag gtaggatttc actgattaaa cgttgtggtg tatcttcatc
    10021 aaaaggcaca acccaatcta cagaggctaa accagctaaa actgccatac gggcagctaa
    10081 atcattaatc gggcgagctt cgccttttag gcgttttacc gaagcatcgg tattgacggc
    10141 tacaattaat cggtcgccta atttacgggc gttttccaaa taggaaacgt gaccggggtg
    10201 aagaatatca aagcaaccgt tcgtcatcac gattttttcg ccacgttttt tcgcttcttc
    10261 cacaatcgct tttaattcgg cttcagaaac cacgccaaaa ccggtggcag tgcgttggtg
    10321 aatcgcattt tccagctcaa ccgggctgac ggttgaagtc cctaatttac ctacgactac
    10381 accggcggca gcattggcta aatagcaggc ttcttcatag gctctgccat cggcaatcgc
    10441 agtggctaat acactgatta cggtatcgcc tgcaccggtt acatcataaa cctctttggc
    10501 ttgggtcggc agatgataag gctcgtggtt cgggcgaagt aaggtcattc ctttttccga
    10561 acgggtaact aatagtgcag ataaatcata gtcggcaatc agttttaacc ctttgctgac
    10621 aatctcatcc tcatctttac aatgcccaac caccgcttca aattccgaca tatttggtgt
    10681 aagcaatgtt gccccacgat agcgttcaaa gtctgtgcct ttcgggtcga tcagcaccgg
    10741 caccttagca ttgcgggcaa tttggatcat ttgttgcacc gattccaatg tgcctttgcc
    10801 gtaatccgag agaattaatg ctccgtaagc ggtaatttct tgcgaaagtt ttgcaagtag
    10861 ggcggtagaa tctacattgt gaaaaccctc ttcaaaatcc aaccgcaata attgctgatg
    10921 gcgggaaaga atccgcaatt ttgtgatggt tgggtgcgaa ttaatcacca cacaatgatt
    10981 ttggatctgg tgggaattaa gtaatttatc taaagcacgc ccggcatcat catcgccaat
    11041 taagccgtgt aatgttaccg gtacgccaag gctggcgatg ttcatcgcca cgtttgccgc
    11101 accgccggca cgctcttcaa tatcttgtac tttcaccacc ggcacagggg cttcaggcga
    11161 aattcgattg gttgccccga accagtaacg gtctaacatt acatcgccaa gcaccagcac
    11221 tttagcatta ttaaattttg gagagtattg catcatcata gttaatattc tctgttaaat
    11281 gatggcgcaa gcgtccacgc ttgtgccatt attagttt
//
LOCUS       DANMCL010000091        11217 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.092, whole genome shotgun sequence.
ACCESSION   DANMCL010000091 DANMCL010000000
VERSION     DANMCL010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11217
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.092"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..388)
                     /locus_tag="PXF40_002209"
     CDS             complement(<1..388)
                     /locus_tag="PXF40_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL5803505.1"
                     /translation="MCKKAFPLWGLIFGLLLSTSAFSVSKNFNYQNILMESLHFSENI
                     ELSSLSKDWLLYSDRNTYHKYQNDEFEFQDKIEQAGKKLQKLVDDRKSEEAPIVFTIP
                     VNSEFGNYDFEQGKFEYQPLMNGHMYI"
     gene            complement(607..852)
                     /locus_tag="PXF40_002210"
     CDS             complement(607..852)
                     /locus_tag="PXF40_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803506.1"
                     /translation="MTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKEFIE
                     PGATIRRSNDQPSIGSVDCDPRKKIHYKFDVHLMNTL"
     gene            complement(1061..1384)
                     /locus_tag="PXF40_002211"
     CDS             complement(1061..1384)
                     /locus_tag="PXF40_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803507.1"
                     /translation="MKNNFGYWLGRKIRAFKEWNHPTFLKYTYIILFLLITYQLRLWL
                     YAVFGAVISLIGIVLLADFMHENNAITQRRNILNELKEIKKLQENDCIKENLTGSHNG
                     TGNGC"
     gene            complement(1397..1891)
                     /locus_tag="PXF40_002212"
     CDS             complement(1397..1891)
                     /locus_tag="PXF40_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5803508.1"
                     /translation="MLSGLKIESFSKEFKRDCFDSESELLNQYLKTQVSQDIKRRITS
                     CFLAVNSEQTVVGYYTLASTSLSLSDLPITLQRKLPRYPTVPAVLLGRLAVDKRVKGL
                     GLGQALLGNALKRVLRADIAAYALIVEAKDESAVNFYRKFGFIDFENEARKLFFPLDR
                     VRLS"
     gene            complement(1891..2163)
                     /locus_tag="PXF40_002213"
     CDS             complement(1891..2163)
                     /locus_tag="PXF40_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HDL5803509.1"
                     /translation="MATATARFEARMSQEVHMLLKRAASLEGRSLSDFVVGAALSAAR
                     KTVEQNDIIRLSVNDQELFAKALIDPPEPNLAMQKALALSSQILGE"
     gene            complement(2322..2750)
                     /locus_tag="PXF40_002214"
     CDS             complement(2322..2750)
                     /locus_tag="PXF40_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803510.1"
                     /translation="MRKLLVITALTLCTTPVFAADKNVIFSCTSTEGKPLTVKRVGND
                     YEYSYDKTTFKNPIKKAVTNDGSIIARGSGFTTYALELENDGLKYLVGFVQPNGNAKE
                     FIEPGATISQSKEQPSIGSVDCDTRKKSHYKFDVHLMNTL"
     gene            complement(2771..4777)
                     /locus_tag="PXF40_002215"
     CDS             complement(2771..4777)
                     /locus_tag="PXF40_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5803511.1"
                     /translation="MKSQFKFKKTHLLVITVLFSSTSSISFADSITDKLEFSKSDSII
                     SDRVFYQIGGGTGYMAPPSRGNTKVVDLGIGWKANLTCGNFDIKTTIKNDLNGLKDGF
                     KDLMGNVIDSAKGAVASMPAMILQRANPQLYDLLTNGMYQGKLDFNRLKTSCEEMSKV
                     LADHTLGGKWGQAADLESYKQITSTQPDAKQAQKDLEDKKGKDGRVWVGGQRKGGQNQ
                     DPINVVGDVAKGGFNLLNKRNVLDSSPVSNCEGNLCQTWDTPQAAADFLTKIIGEQSI
                     STCKEDCGTKTSSKAGVGLSPEIEEEHIRTIVKLENVLNMDVPKSELLAELSSSSVPV
                     TRGLIESLRDDPDVELLSQRLSAEIATSKVMEKMLLARRAILAGMREPNVAQNADAQV
                     ELERVLNIIDREISQVKLEMDMQKMITGNTASVILQSKSEREALAGAHSLSQDSLDKR
                     VQGLENGNVALTDLETGSNINLSRRNIALSIPNIPNVAALIPTLPNRGGSGVGGNFPS
                     LAQISGSTMDQATGLLRNFEGFISKAQWDVNAHRVGYGSDTITRADGTVVKVTKDTVI
                     TKEDAERDLARRTAIFANNVRQELGDSHWNALPANAQAVLVSYAYNYGSLAKTKSVLD
                     AARRSAQTGDMTALATAVRNRQVDNNGINARRRNQEADYILGKN"
     gene            complement(4792..5733)
                     /locus_tag="PXF40_002216"
     CDS             complement(4792..5733)
                     /locus_tag="PXF40_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03756 family integrating conjugative element
                     protein"
                     /protein_id="HDL5803512.1"
                     /translation="MKRAFFSVLLSVSLAVPTTLYPQQVKASLNTASIAASSASTSCL
                     DYKVVGTCFWLFCTYFGCKVRTSTKIKHYLPEMVVSSYNQDGQTPWTELQSLNPGVKG
                     GEYRSPQRQYSQLTFKNADAFGHPQGAIGQLLGSTGYYCKSQTTPFIPYFLSGLDFFA
                     WRENMPEMFYPEALIPGMREVGRVGDSWGNIYPRSGWVTQAHDYKASATIVQRVADIV
                     TRTAQPHIYFPAAKKGGVGEWPPGPVEEGQARTHKWQMLYPQMSNTCSVFPNGGQTDT
                     YSSQISNQGDYAWALWRPYSCCKRRGQTFLYSIDWSH"
     gene            complement(5730..6173)
                     /locus_tag="PXF40_002217"
     CDS             complement(5730..6173)
                     /locus_tag="PXF40_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03757 family integrating conjugative element
                     protein"
                     /protein_id="HDL5803513.1"
                     /translation="MKASRFLGYFSIVTVVFSVVAQAQPNIIVYTTKMYPIQNSQLAS
                     QVYYLDQVENFEEEISRNLSKSPEIAEREIRAFFNSADWKAQEEQLKDAYQGVISGWQ
                     NGIKKVPAVFFNNLQSSPSVIYGMTDIQKALDEWHKWVQQHGESK"
     gene            6548..6901
                     /locus_tag="PXF40_002218"
     CDS             6548..6901
                     /locus_tag="PXF40_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803514.1"
                     /translation="MSQQTAGWDVIPFESSKTAKPSLFWKLGNKLGNIFVSAKHKAKS
                     KYVEVTKGINQRIAEEDEMRALELQMCLDEQAAEYEQEISRIKRKMFFRALFVAIIAF
                     LCGMATVFGTQLSLI"
     gene            6973..7218
                     /locus_tag="PXF40_002219"
     CDS             6973..7218
                     /locus_tag="PXF40_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5803515.1"
                     /translation="MSVHIKLSCVGDILPIKLNEWTPEHRALHHEISHKALEAWQNRD
                     KGTQSVRFMQQMPARQGLHFRFLSVSEQDGKLIVSRS"
     gene            7227..7469
                     /locus_tag="PXF40_002220"
     CDS             7227..7469
                     /locus_tag="PXF40_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803516.1"
                     /translation="MFGKLFYKMNPKVLAKIGEDFRKAGYLMGAGFVGMVISNDQIST
                     SEGFVLFLWGLYIWIIGHIALHHSEKILNSKQGEPK"
     gene            7733..8575
                     /locus_tag="PXF40_002221"
     CDS             7733..8575
                     /locus_tag="PXF40_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803517.1"
                     /translation="MSDSVLNTYFKHALVKAGFPDTLDMEYSLSHCQGDGVAFYGRLG
                     TDDLIQLFNHLNPQKRKQKMFANLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMEL
                     YAKTADQLVFFNDSDARRNWYFPTSKVDKYKALWDGFIEDLEQYIKDISREMESVGYQ
                     IIEASPYQTETVFKFNTEKYLVELKRKPSEFYSELVDWAFGDMCDFEAAIEQICQGQL
                     CYADFEATVTDKKSEIQLGLARLSGISYSPNDRSFSGYRQELIGEAIASARHNAARFA
                     YLHA"
     gene            8690..9103
                     /locus_tag="PXF40_002222"
     CDS             8690..9103
                     /locus_tag="PXF40_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5803518.1"
                     /translation="MKNEHNLEQLKYIWDNRNLENKVYQYLFHICIEPMKKGDWNRYT
                     IWLNFHGNLINVSDVVYRVVESQKLKDDIKIWYDKQYYCRPTKVETTGFISIFLHLFY
                     EGIARILLEQGMITETEAAEKSYNFRAANCFQRLL"
     gene            9117..9272
                     /locus_tag="PXF40_002223"
     CDS             9117..9272
                     /locus_tag="PXF40_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803519.1"
                     /translation="MEPRTVKVIYDDGDYFFTLINADEQTIRNYYAIGSSIGFDNTRK
                     IVAVEIL"
     gene            9352..10335
                     /locus_tag="PXF40_002224"
     CDS             9352..10335
                     /locus_tag="PXF40_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5803520.1"
                     /translation="MNPQSNTQPKFDLYQEVTDKIIAALEQGTAPWLKPWDSVIPYGG
                     MPCNAISGRLYSGINVLLLWLSAAEHGYIQRKWITAKAAIEAGGHVRKGEKATLAVSY
                     RPYDREKTDDDGNLVLDDDGNPVIEHLASIKKHCLFNIEQCEKLPQDWYETVETPEQL
                     TDENQYAIFEEIRLMLKGMDLQVMVKPSNQAYYHPRNDHIVMPEMKQFHSPQKFHSVL
                     LHEMTHATGHQSRLARDGIVSGKARFGNKVYAFEELVAEMGCAFLCSHLGFADVPQNA
                     SYIESWIKVLREDKRAIFRASGKAREACQYMLDALNIAQLADKYEVFEEAA"
BASE COUNT         3298 a         2235 c         2139 g         3545 t
ORIGIN      
        1 aaatatacat atgcccattc atcaggggtt ggtactcaaa cttaccttgt tcaaaatcat
       61 aattcccgaa ttctgagttt acaggaattg tgaaaacaat aggggcttct tcagattttc
      121 tgtcatccac cagtttttgt agtttcttac cagcttgctc aattttatcc tgaaactcaa
      181 actcgtcatt ttgatattta tgatacgtat ttctatcgct gtaaagtaac cagtctttag
      241 ataacgaact aagctcgata ttctcactaa aatgtaatga ttccatcaat atgttttgat
      301 agttgaagtt tttagacact gagaatgctg aagtggatag cagtaatccg aagattaagc
      361 cccataatgg gaaagctttt ttacacattt ttatctcctg acacattaga gagtttaaat
      421 tatgatagat ccacctgata ataaagagca agtcttttaa acaaaaatcc cttagatttt
      481 ttaaacctaa gggatttacc taccgagcat tgtgtttttt aacgtgggtc agctctgaca
      541 ccacaattgt tcatctgccg agctttgtct tttttaactt gggctagctc tagcaccaca
      601 aaggtattat aaagtattca tcaaatgaac atcaaactta taatggattt ttttacgagg
      661 gtcacaatcc acagaaccaa tacttggttg atcattacta cggcgaattg ttgctcccgg
      721 ctcaataaac tcttttgcat ttccatttgg ttgaacaaat ccgactagat atttcaagcc
      781 atcattttcc aactctaagg cataagtagt aaaacctgag cctctggcga taatcgaacc
      841 gtcgttggtc actgcctttt taatcgggtt tttgaaagta gttttgtcat acgaatactc
      901 gtaatcattt cctacccgtt taactgtgag aggtttacct tctgtgctgg taaaagtcgg
      961 agatatggga aatagtgtgg tgcaatataa aattaatact aaaataaatt cttaataaaa
     1021 aatagctaca gttttattga aaattgtagc tatttagaat ttaacagcca ttaccagtac
     1081 cattatggga tcctgttaaa ttttctttaa tacagtcgtt ttcttgtaat tttttgattt
     1141 ctttaagttc attaagtata ttacgtcttt gtgttattgc gttattctca tgcataaaat
     1201 cagctaacag aacaatacca attaaggata taactgctcc gaatacagca tataaccata
     1261 gccttagctg ataagttatt aggagaaata atataatata tgtatatttg agaaaagtgg
     1321 gatgattcca ttctttaaaa gctcgaattt tcctgcctaa ccaataacca aaattatttt
     1381 tcataatcac tctccattaa gataatctca ccctatctag tggaaaaaat aatttcctag
     1441 cctcattttc aaagtcaata aatccaaatt tacgataaaa attgaccgca ctttcatctt
     1501 ttgcctcaac aattaatgcg taagctgcta tatctgcacg aagtaccctt ttaagtgcat
     1561 tacctaatag agcttgccct aaccctaatc cctttacacg cttatctact gctaatcgac
     1621 caagtaggac ggcaggtacc gtaggatatc ttggtaattt cctctgtaat gtaattggta
     1681 aatcagataa tgaaagactt gttgaagcca gtgtgtaata tcctactact gtctgttcag
     1741 aattaacagc taaaaaacaa gaagtaatac gtcttttaat atcttgtgaa acctgagttt
     1801 tgagatattg atttaataat tcagattcac tatcaaaaca atctcgttta aattccttgc
     1861 taaatgactc tattttcaat cccgaaagca ttattccccc agaatctgtg agcttaatgc
     1921 caaggctttt tgcattgcca aattaggttc aggaggatca atcaatgctt tagcaaaaag
     1981 ttcttggtca ttcacagata atcgaataat atcattttgc tcaactgttt ttcttgctgc
     2041 agatagtgca gctccaacaa caaaatcact aagactacgc ccttcaagag aagcggctcg
     2101 ttttaacagc atatgaactt cttggctcat tctagcttca aatcgtgcgg ttgcagttgc
     2161 catatatttt ctccttgaat tatttagttt taattgtacg tatttatacc gtacaaatca
     2221 agcatgacaa taaaaaaatc ccttagattt tcaaacctaa gggatttacc taccgatctt
     2281 tgtgtttttt aacgtgggct ggccctagtg ccatacaggc attataaagt attcatcaaa
     2341 tgaacatcaa acttataatg gcttttttta cgagtatcac aatcaacaga gccgatactt
     2401 ggttgttctt tactttggct aatcgttgct cccggctcaa taaattcttt tgcattgcca
     2461 tttggctgaa caaagccgac caaatacttc aatccatcat tttccagctc taatgcatac
     2521 gttgtaaaac ctgaacctct ggcgataatt gagccgtcat tagtgactgc ctttttaatc
     2581 ggatttttga aggttgtttt gtcatacgaa tattcgtaat catttcctac ccgtttaaca
     2641 gtaagcggtt ttccctccgt gctggtacag gaaaatatta cgtttttatc tgctgcaaat
     2701 actggggtcg tgcagagtgt aagagcagta attactaata atttacgcat aaatgtaact
     2761 ccttataagg ttaattttta ccaagaatat aatcagcttc ctgattccgg cggcgtgcat
     2821 tgataccgtt attatcaacc tggcgatttc tgacagcagt tgccaaagca gtcatatcac
     2881 cagtttgagc tgatcgtcta gctgcgtcaa gcacactttt tgttttcgct agtgagccgt
     2941 aattatatgc ataagacacc aaaacagcct gagcgttcgc cggtaatgca ttccaatgtg
     3001 aatcacctaa ctcttgtctc acattgttcg caaagatagc agttctgcga gctaaatcac
     3061 gttcagcatc ttctttggta atcacagtat ccttggtcac tttaactacg gtaccgtctg
     3121 cccgtgtaat cgtatcggaa ccatatccta cacgatgggc attcacatcc cattgagcct
     3181 tggagataaa gccttcaaaa ttacgcagta accctgttgc ctgatccatc gttgaaccgc
     3241 tgatttgtgc aagtgatggg aaatttccgc ctacacctga accacctcta tttggtagag
     3301 tcgggatgag agctgctaca ttcggaatat ttgggatact caatgcaata tttctacgag
     3361 agaggttaat attagagcct gtctctaaat cagttaatgc aacattaccg ttttcaagtc
     3421 cttgaacacg cttatccaga ctatcttggg ataaactatg agcaccagca agagcttccc
     3481 gttcggattt actttgcaga atcaccgaag ccgtattgcc ggtgatcatt ttttgcatat
     3541 ccatttccag ttttacttgg gaaatttcac ggtcaataat attgagtact ctttccagtt
     3601 ctacttgagc atccgcattt tgagcaacat tcggctctcg cataccagct aggattgctc
     3661 ggcgagccag tagcattttt tccattactt tactggtcgc aatttcagcg gataaacgtt
     3721 ggctgagaag ttcaacatct ggatcatcac ggaggctttc aatcaagcca cgagtgacag
     3781 gtacactact tgagcttaat tcagctaata gctcggattt cggcacatcc atattcagta
     3841 cattttctaa tttaacaatt gtacgaatat gttcttcttc aatttccgga cttaaaccaa
     3901 caccggcttt cgaactggtt ttagtaccac aatcctcctt acaggttgaa attgattgct
     3961 caccaataat cttagttaag aagtcggcag cagcttgagg tgtatcccaa gtctgacaaa
     4021 gattaccttc acaatttgaa accgggctgc tatctaagac attccgctta ttgagtaaat
     4081 taaatccgcc tttcgctaca tcaccaacga cattaattgg atcttggttt tgcccacctt
     4141 tacgttgccc accaacccaa actctcccat ctttcccttt tttatcttct aggtcttttt
     4201 gggcttgctt cgcatcaggt tgtgtcgagg taatttgctt atagctctct aaatctgctg
     4261 cttgccccca ttttcctcct agtgtgtgat ctgccagaac tttagacatt tcctcacagg
     4321 aagtttttag acggttgaaa tccagcttac cttggtacat accatttgtc agcaaatcgt
     4381 agagttgagg gttggcccgt tgcaatatca ttgcaggcat actggcaacc gcacctttag
     4441 ctgaatcaat gacattcccc attaaatctt taaagccatc tttaaggccg tttaaatcat
     4501 ttttaatagt tgttttaatg tcaaaattgc cacaggttaa attcgctttc caaccgatgc
     4561 ctaaatcaac gactttggta ttaccacgac taggtggagc catataacct gttcctccgc
     4621 cgatttggta aaagacacga tctgaaataa tcgaatccga cttactaaat tccagtttat
     4681 cagtgattga gtcagcaaaa gagatagagg aagtactgga aaaaagtact gttattacta
     4741 atagatgtgt tttcttgaat ttaaattgtg atttcattgc aagacctcgt tttagtgtga
     4801 ccaatcaata ctgtaaagga atgtttgccc tcggcgttta caacaactat aaggtcgcca
     4861 tagtgcccaa gcataatcac cttgatttga aatctgagag gaataggtgt ctgtttgccc
     4921 cccatttgga aaaacagagc aggtatttga catttgagga taaagcattt gccatttatg
     4981 tgttctggct tgtccttctt cgacaggtcc tggtggccat tctccaacac cacctttttt
     5041 cgctgccggg aaataaatat gtggttgagc agttcgggtc acgatgtctg caactctctg
     5101 cacaatggtt gcagaggctt tataatcgtg agcttgtgtt acccaaccgg aacgtgggta
     5161 aatatttccc cagctatcgc ctacacggcc aacttcccgc attcccggaa tcagagcttc
     5221 cggataaaac atttccggca tattttcacg ccaagcaaag aaatctaatc cacttagaaa
     5281 atagggtata aatggtgtgg tttgactttt acaatagtag cctgtacttc ctaataactg
     5341 accaattgct ccttggggat gcccgaaagc atctgcattt ttgaaggtta gttgagagta
     5401 ttgacgttgc ggagaacgat attctccgcc ttttacgcca ggattgagag attgtaattc
     5461 tgtccacgga gtttgcccat cctggttata agatgaaacg accatttccg gtaaataatg
     5521 cttaattttg gttgatgtac gaaccttgca tccaaagtag gtgcaaaata accagaagca
     5581 cgttccgacg actttatagt ctaaacagct tgttgaggca cttgatgcag caatcgacgc
     5641 cgtattcaat gatgctttta cctgttgagg atataaggtt gttggtactg ctaaacttac
     5701 agagagaagt accgaaaaaa acgctctttt cattttgatt caccgtgttg ttgaacccat
     5761 ttatgccatt catctagtgc tttttgtata tcagtcatac cataaatcac gctcggagag
     5821 gattgcagat tattaaaaaa caccgcaggc acttttttaa ttccattttg ccatccactg
     5881 atcacccctt gataagcatc ttttaattgc tcttcttggg ctttccaatc tgctgaatta
     5941 aagaatgctc gtatttctcg ttcggcaatc tcgggggatt tactgagatt tcgactgatt
     6001 tcctcttcaa aattctctac ttgatcaaga taataaactt gggaggcaag ttgtgaattt
     6061 tgaatggggt acatctttgt tgtatagaca atgatattcg gctgtgcttg tgccactaca
     6121 gaaaacacta ctgttactat gctgaaatat cctagaaatc tacttgcttt catcactctc
     6181 tttccgaata aataagcaga aaattagcga gatttttaca tagaggatag gaaaaactct
     6241 tttcaaaaaa gagatatttt tttgagcaaa aaatggttga ttttataaat ggatttcgta
     6301 tgatatggaa tattaagatg ctgtggaaac agcccttaaa agtcgcataa ctcttgagaa
     6361 gcggcggcta tccatcgagg tagttgagtt atttacccaa aatgtctccc agcattctga
     6421 aagggaacgc tgcaaatttg caggaatgcc acctaaacac ctaccttccg agggatattt
     6481 caattccctt ggaattgcga tctcctgagg aattttattt atttaacttt ttataggaga
     6541 actcgctatg agtcaacaaa ccgcaggatg ggatgtgatc ccatttgaat cgtcaaaaac
     6601 cgcaaaacct tctctttttt ggaaacttgg caataagctc ggtaatattt tcgtttcggc
     6661 gaaacataaa gctaaaagca aatatgtcga ggtaaccaaa ggcatcaatc aacgaattgc
     6721 tgaagaagat gaaatgcgag ccttagaatt gcaaatgtgc ttagatgagc aagcagctga
     6781 atatgagcag gaaatttctc gcattaagcg taagatgttt ttcagggctt tattcgttgc
     6841 gattattgcc tttttatgtg gtatggctac cgtttttggt actcagctct ctttaatcta
     6901 atttaactca cccatcgggg aaatgctatt tcccttgtgg taatacattt ccccttaatt
     6961 ttggagaaat gtatgtcagt tcatatcaaa ctctcctgtg ttggagatat tttgccaatc
     7021 aaactcaatg aatggacacc ggaacatcga gccttacatc acgaaattag ccataaagct
     7081 ctcgaagcct ggcaaaatcg agataaaggc actcaaagcg tgcgatttat gcaacaaatg
     7141 ccagcccgac aaggactgca tttccgcttt ctgagtgtat cggagcaaga cggcaagctc
     7201 attgtcagtc gttcatagtt ggttcaatgt ttggtaagct tttttacaaa atgaatccca
     7261 aagtactagc taaaatcgga gaagatttta gaaaagctgg ttatcttatg ggagctggtt
     7321 ttgtcggaat ggtaatttcc aatgatcaga tttccacatc ggaaggattt gttctttttt
     7381 tgtggggatt gtatatttgg attatcgggc atatcgcact acatcattct gagaaaatac
     7441 ttaattcaaa gcaaggagaa ccgaaatgag tccgtacttt ttaggtgctg ctattggaac
     7501 agcgttattg gcaacaattt ttattgttct agtaacttgg gcaaatcgag atattttgtt
     7561 tacaaaatca gataagccac agtctaaata gcaaaactcc attctaaccc ataggggaac
     7621 aagttccccg aggagcttgt tctccgtttt accttccttt taccctatcg ggaaatactt
     7681 tcccgaattg ggcttaagtg tttcccatta ttttttattt tggagaaaca ttatgtcaga
     7741 ttcagtatta aacacttatt ttaaacacgc tcttgtcaaa gctggttttc cggatacctt
     7801 agatatggag tattcactca gccattgtca aggagatgga gtcgcatttt atggtcggct
     7861 tggtacagat gatctaatcc agcttttcaa tcatctcaat ccacagaaac gtaaacagaa
     7921 aatgtttgct aatttgctaa cgcacattga atcttgggaa acccacgatg atattggttt
     7981 tgaaattata cgaaatcgct ttgggtatcg ttactcgcat tggaatacga tggagcttta
     8041 tgctaaaact gcagatcagt tagtgttttt caatgatagt gatgctcgaa gaaactggta
     8101 ttttcctact tcaaaagtgg ataaatacaa agcattgtgg gacggattta tcgaagattt
     8161 ggagcagtac atcaaagata tttcccgtga aatggaatcg gtcggttatc aaattattga
     8221 agcctcgccg tatcaaacgg aaaccgtttt caaatttaat acggaaaaat atctagtaga
     8281 actgaaacgt aaaccttctg agttttattc agagcttgtt gattgggcat ttggtgatat
     8341 gtgtgatttt gaagcagcta tagagcagat ttgtcaaggg caactctgtt atgctgattt
     8401 tgaagcaact gttaccgata agaaaagtga aattcagtta ggtcttgctc gcttgagtgg
     8461 aataagttac tcgccgaatg accgttcgtt tagtggttat cgacaagagc ttattggtga
     8521 ggcgattgcc tctgctcgcc ataatgcagc acgttttgcc tacttgcacg cctaatttgc
     8581 agatttttac tttaatttga ccgcttgtag tggttaattt tcaccccgtg gggaaatatt
     8641 ttccctattg ggcaaaatgt ttctccactt tttaatttgg agaaatgtta tgaaaaatga
     8701 acacaattta gagcaactta aatatatttg ggataaccgc aaccttgaaa ataaagtcta
     8761 tcaatatctg tttcacatct gcattgagcc gatgaaaaaa ggagattgga atcgttatac
     8821 gatttggctt aattttcacg gtaacttaat caacgtgtca gacgttgtat atcgagttgt
     8881 ggaatctcaa aagctcaaag atgacatcaa aatttggtat gacaagcaat actattgccg
     8941 tccaaccaaa gttgaaacaa caggttttat ttccattttt ctgcacctgt tttatgaggg
     9001 catagctcgt attttgctgg aacagggaat gattactgaa actgaagcag ccgagaaaag
     9061 ttacaacttc agagctgcaa attgttttca acgtttgctt taatggaggt gagataatgg
     9121 aacctcgcac tgttaaagtt atttacgatg atggcgatta tttctttacc ctaatcaatg
     9181 ccgatgaaca gactattcgt aattactacg ctataggcag ttcaatcggt tttgataaca
     9241 caaggaaaat tgtcgctgtt gaaattttat aaactaccca tcggggaaac gacttcccca
     9301 tagggcgata gtgtttcccc atttttctac ccgaactttg gagaaacact tatgaaccct
     9361 caatcaaaca cacagcctaa atttgattta tatcaagaag tgaccgataa aatcatcgcc
     9421 gctttagagc aaggaacggc tccttggctt aaaccttggg atagcgttat tccttatggt
     9481 ggtatgccgt gtaatgccat atccggaaga ttgtattccg gaatcaatgt tttgttactt
     9541 tggttgtctg ccgcagaaca cggctatatc caacgcaagt ggatcactgc aaaagcagct
     9601 attgaagccg gtggacacgt tcggaaaggt gaaaaagcaa cccttgcggt cagctatcgc
     9661 ccgtatgatc gagaaaaaac cgatgatgat ggcaaccttg tcctcgatga cgatggtaac
     9721 ccggtaatcg aacatctcgc ttcgattaaa aagcactgcc tattcaatat tgaacagtgc
     9781 gaaaaactgc cacaggactg gtatgaaacg gttgaaaccc cagaacagct gactgacgaa
     9841 aatcagtatg ctatttttga ggagattcgt ttgatgttga aaggtatgga tttgcaagtg
     9901 atggtaaaac caagcaatca agcttactac cacccacgca atgaccatat cgtgatgccg
     9961 gaaatgaagc agtttcattc accacaaaaa ttccatagcg tgctgctaca tgaaatgact
    10021 cacgcaacag ggcatcaatc tcgccttgct cgtgatggta ttgtttccgg aaaagctcgc
    10081 tttggcaata aagtttatgc ttttgaagaa ttggtcgctg aaatgggctg tgcattcttg
    10141 tgttctcacc taggctttgc tgacgtgcca caaaatgcca gctacattga aagttggatc
    10201 aaggtgttaa gagaggataa acgggcaatt ttcagggctt cagggaaagc tcgggaagcc
    10261 tgtcaatata tgctggatgc cttaaacatc gcacagctgg ctgataaata cgaagtattt
    10321 gaagaagccg cttaataaat ttgccgaaag gcatttcccg tggggagata ctctcccttc
    10381 ggggcattgt gtctcccttt ttattcactt aacgagagga ctcaatgctc aatctaaact
    10441 tatttaaacg acccattgaa atttcgacac ttgaatcttg gtcaaaattc tgtgatgatg
    10501 ttggtaaagt agcttttgtt gcagtacctg ctatgctgta tagtaattac gagttttgga
    10561 ttaagataag cagtataatt ggtctattta tagctaccta tttctgttta gttatcggta
    10621 gaaatatacg ccaatttatt gagaaggaga aatcaaaatg ggattaatga tcggcatttg
    10681 gattattgct tttattgcat ttgggttggc catatggaca agccatattc taaaaaagca
    10741 agatgaacgc cttaaacagc taaaaaatag ctaactttca aaatacggca cattttgtgc
    10801 cgtatttctt ttgtactggt ggcaaatata agattactat catcagtata ttgtaatatc
    10861 tcaactcaac agcattagtc aaaaatcctc caacatattc agagagtttt tcctactgag
    10921 ttctcttatt ttttggttca atactctccc tttataaatt aaatttggtt cagataaaag
    10981 ccgctcaatg gcaaaaggat aaaggagccc ttacgggcaa gggtaatccc ctaaggggga
    11041 ataagggtaa cctttccaag gggaaaggtc ttacccaaaa gggcaaaggg ctaaacggct
    11101 ttctttcaac gcaaacatca tctttttcgg tctatttcaa tgcactcaat tctcaaaaaa
    11161 attcttggca aaagtaaatc ctcgtctcaa agttcggtta aatctgacaa tgttttc
//
LOCUS       DANMCL010000092        11112 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.093, whole genome shotgun sequence.
ACCESSION   DANMCL010000092 DANMCL010000000
VERSION     DANMCL010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11112
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.093"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(19..1308)
                     /locus_tag="PXF40_002225"
     CDS             complement(19..1308)
                     /locus_tag="PXF40_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HDL5803521.1"
                     /translation="MDSIPLSSLFITLAILLVLSAFFSGSETGLMSLNRYKMRHLAEQ
                     GHKGAKLAEKLLARTDVLLSLILICNNLVNIAASAIATMIGMQLSGEAGVAIATGLLT
                     FVMLVFSEILPKTVAAIYPEKVGFFASFVLTPLKKLLSPIVFLMNLIIAGLMKLLRIQ
                     QKDKQGLSSEELRSVVLDAGKFIPAEHREMLVSILDMEKVTVDDIMVPRNDISGIDID
                     DDWKAIMRQLNHAPHARVIIYKGDMDNNIVGILRVREAFRLMLEKNEFTKEMLLRATD
                     EVYFIPEGTPLTTQLMNFKANKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSSAP
                     TLEQEVQQQSDGTVIIEGSANLRDLNKLFDWDLPLEEARTFNGLILEHLEKIPDEGME
                     FELYNLKVMILEVSENMVKQAKVEHLSPKIEKEQDSA"
     gene            complement(1432..2229)
                     /gene="ccsA"
                     /locus_tag="PXF40_002226"
     CDS             complement(1432..2229)
                     /gene="ccsA"
                     /locus_tag="PXF40_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HDL5803522.1"
                     /translation="MLLPLLSIVAYALALLWVAPTLVNLENAATVNKKPNMMLVFGFG
                     LLATILHFSVLYNELFLIEGQNFTVTNVISLMSFIMAACVTLALLKWKTVWFPLIIVY
                     SFAICSVGVAGFVKGSFIRNVQENAGLLFHLGIALFSYALFFLALIYAFQLKWLDRKL
                     KSKTMFFCQILPPLMTVERHFFTLTLAAQAMLTLTLFSGVVYLHNFFEPEHIHKAIFS
                     FLAWLVYSIQLLGQWKLHWRGKRVLIYSISGMMLLTIGYFGSRLIVN"
     gene            2445..2969
                     /gene="yceD"
                     /locus_tag="PXF40_002227"
     CDS             2445..2969
                     /gene="yceD"
                     /locus_tag="PXF40_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005621677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HDL5803523.1"
                     /translation="MQKVKLPLTIDPYKDAQRRVDYEGYISGKLLTRLGESVCNVQSD
                     AQVTLSLYVDPQRLTVIKGTAKVDVEFDCQRCGDPFTQTLDCSFVFSPVSNMDQADIL
                     PEIYEPIEVNEFGEVNLLDMIEDEFILELPLVPMHSEEHCEVSVSEQVFGELPEELVQ
                     KPNPFAVLANLKKN"
     gene            2986..3156
                     /gene="rpmF"
                     /locus_tag="PXF40_002228"
     CDS             2986..3156
                     /gene="rpmF"
                     /locus_tag="PXF40_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006231206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HDL5803524.1"
                     /translation="MAVQQNKKSRSRRDMRRSHDALTTAAVSVDKTSGETHFRHHVTA
                     DGYYRGRKVINK"
     gene            3175..4197
                     /gene="plsX"
                     /locus_tag="PXF40_002229"
     CDS             3175..4197
                     /gene="plsX"
                     /locus_tag="PXF40_002229"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HDL5803525.1"
                     /translation="MVDITLAVDVMGGDFGPRVTIPALEKALKQNPSLSFLLFGDEHQ
                     IAPLLQKHTLLNHPKIQIHHTEQVIEADVPFTTAIRQSKNSSMRLAIEAVKEGKAQGC
                     VSGGNTGALMGLAKLLIEPLPNIERPALTSLIPTLNGKSSVMLDLGANIEVSNHQLQQ
                     FAEMGNLFAQVMLDLVYPRLSLLNIGTEENKGTAQLQAVHQLLKNRQDLNYTGFIESD
                     KLTSYLTDVIICDGYTGNIALKALEGAAKNIISLFKKEKADSNICRNTKRYLLKAMFY
                     RYYRKLQQINPDRHNGATLLGLSKVVVKSHGGANINAFYYAIDYAVQQIQGDIPNKIL
                     EGLTQK"
     gene            complement(4294..5577)
                     /gene="hisD"
                     /locus_tag="PXF40_002230"
     CDS             complement(4294..5577)
                     /gene="hisD"
                     /locus_tag="PXF40_002230"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HDL5803526.1"
                     /translation="MQTLIWNNLTETEQQQYLARPAQVVGESIKAAVNEIKANVIANG
                     DKALFELAEKFDKVKLESLVVSEQQIQQAQSRISPELKQAIQNAKANIEAFHKAQQNQ
                     EVDIETQPGVCCQVITRPINAVGLYIPGGSAPLFSTVLMLAVPAKIAGCNKIVLCSPP
                     PIADEILYTAHLCGVETIYAVGGAQAIIAMANGTQTVAKVDKIFGPGNAFVTEAKRQV
                     VQEGTAIDMPAGPSEVLVIADEFADPAFVASDLLSQAEHGADSQVILVTPSESLARAV
                     DEELEKQVAVLPRAETARKALAHSRTFIAENLQQAVEISNKYAPEHLIVQTENARSLL
                     ADLDNAGSIFLGAYSPESMGDYASGTNHVLPTYGYTKTYSSLGLADFSKRMTVQELTP
                     QGFLALAETVERMASAELLDAHRNAVSLRVAKLKG"
     gene            complement(5589..6488)
                     /gene="hisG"
                     /locus_tag="PXF40_002231"
     CDS             complement(5589..6488)
                     /gene="hisG"
                     /locus_tag="PXF40_002231"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HDL5803527.1"
                     /translation="MTTQNRLRIAMQKKGRLSQECSELLKQCGVKIIWNDQRLIAYSE
                     NMPIEILRVRDDDIPGLVFDGVVDLGIIGENVLEEVELGRLSAGENVAYKKLRQLDFG
                     GCRLSLAIDRDKNYNNIKDLEDAVIATSYPNLLKRYMKEQNVPFKSILLTGSVEVAPS
                     AGIANAICDLVSSGATLEANGLKEVEVIYRSTACLIQRQEPLSAEKQALVDKLLTRIQ
                     GVQQANESKYIMLHAPKDKLAEITALLPGVENPTILPLANDQTRVAMHVVSQENLFWE
                     TMEQLKEMGASSVLVLPIEKMLA"
     misc_feature    complement(6521..6648)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            6847..7704
                     /locus_tag="PXF40_002232"
     CDS             6847..7704
                     /locus_tag="PXF40_002232"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HDL5803528.1"
                     /translation="MQISLKKIYSGKVRDLYEIDEKRMLMVATDRLSAFDVILDDPIP
                     RKGEILTQISNFWFNKLAHIMPNHFTGDSVFDVLPQEEAEAIQHRAVVCKRLIPVKIE
                     SIVRGYLTGSGLKDYQQTGTICGLTLPEGLVEASKLPQPIFTPSSKAEVGDHDINISY
                     EECERQIGQELAAKVRDAALKLYTEAANYALTKGIIICDTKFEFGLDENGELTLMDEV
                     LTPDSSRFWSVETYREGTNPPSFDKQFVRDWLENSGWNKQPPAPKIPAEVIEKTVAKY
                     QEALDLLTK"
     gene            complement(7845..9326)
                     /gene="ilvC"
                     /locus_tag="PXF40_002233"
     CDS             complement(7845..9326)
                     /gene="ilvC"
                     /locus_tag="PXF40_002233"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HDL5803529.1"
                     /translation="MANYFNTLNLRQKLDQLGRCRFMDRDEFADGCNFLKGKKIVIVG
                     CGAQGLNQGLNMRDSGLDIAYALRAEAIAEKRASFKRASENGFVVGTYEQLIPEADLV
                     INLTPDKQHSKVVADVMPLMKQGAAFGYSHGFNIVEEGEQIRPDLTVVMTAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGLAIAKAWASATGGDRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSIVCYDKLVSEGKDPAYAGKLIQYGWETITEALKQGGITLMMDR
                     LSNSAKLRAFELSEQIKEELAFLFEKHMDDIISGEFSSTMMADWANGDANLLKWREET
                     GKTAFENAPQADGIKISEQEYFDNGVLMVAMVKAGVELAFDTMVSAGIYEESAYYESL
                     HELPLIANTIARKRLYEMNVVISDTAEYGNYLFSHVATPILAEKIIPTLEKGDLGEPT
                     PAVEIDNVTLRDVNDAIRNHPIELIGQELRGYMTDMKRISSQG"
     gene            9548..10783
                     /locus_tag="PXF40_002234"
     CDS             9548..10783
                     /locus_tag="PXF40_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HDL5803530.1"
                     /translation="MKINRIILQSCSECGQQVRVPLTSNGNAVCPVCHNILRKSNTWS
                     LHRSAFLALAILILLPFALTFPLMSIDLLGIKINATVWDGIWKMATEGYPYTAFMVLV
                     CAVIMPIAFVLLILTIQLQRIIRQRPRYTLIFLTKIKEWVMLDVYLVALAVAAFKIRD
                     YADLQFDINLIAFVLVTLLNTLLFIKTEPKQAWERFYPEYHALPFDHPSNPTLCPTCE
                     YCFDETILDLKGRQRCPRCESNLSISDNVKIQRVWACLIAGTIMMIPANIFPISTTEL
                     AGQVSADSLMSGVLLFMEMGSYTVAAIVFIASIAVPVSKITIIFYLLLAIHYKWKHPI
                     HWQMKLLHYVHFVGRWSMLDLFVLSLMMSLLERGQILSFSVGEAAFYFGAAVFLTMFA
                     SANLDSRMLWKIHTVQKTS"
BASE COUNT         3325 a         2473 c         2086 g         3228 t
ORIGIN      
        1 ctttcttttt tcttaaaatt aggctgaatc ttgctctttt tcaattttcg gtgaaagatg
       61 ttcaactttc gcttgtttaa ccatattttc actcacttca agaatcatca ctttcaagtt
      121 gtagagttca aattccattc cttcatcagg aattttttct aaatgctcta aaatcaagcc
      181 gttaaaggtt ctggcttcct caagcggtaa atcccaatca aatagtttgt tcagatcacg
      241 caggttggct gagccttcaa taatcaccgt accatctgat tgttgctgaa cttcttgctc
      301 aagggtcggt gctgatgaag tcgtaaattc acccacaatt tcttctaaaa tatcttcaag
      361 agtgactagc cctttaatat caccatactc atcaaccact aaaccaatac gctctttatt
      421 cgctttaaag ttcattaatt gtgtagtgag tggtgtgcct tcaggaataa aatagacttc
      481 atctgttgca cgcagtagca tttctttggt aaattcgttt ttctccaaca ttaaacgaaa
      541 ggcttcacgc acccgcaaaa tcccaacaat attgttgtcc atatcccctt tgtagataat
      601 cacccgagcg tgaggggcgt gattaagctg acgcataatc gctttccagt catcatcaat
      661 atcaatgccg ctgatgtcgt tgcgaggcac cataatgtca tcaaccgtca ctttttccat
      721 atctaaaata gagaccaaca tttcacggtg ttcggcagga ataaatttac cggcatcaag
      781 cactacacta cgcagctctt cggagcttaa gccttgttta tctttttgtt gaatccgcaa
      841 taatttcatc agcccggcaa taatcaaatt cattaaaaat acaatcgggc tgagtaattt
      901 tttaagcggt gttagcacaa agctggcgaa aaaaccgact ttttcagggt aaattgccgc
      961 tactgtttta ggtaggattt ccgaaaaaac caacattaca aaagttagca aaccggttgc
     1021 aattgccaca ccggcttcac cggataactg cataccgatc atcgttgcaa tcgcagaggc
     1081 ggcaatgttg actaagttat tacaaattaa gataaggcta agtagcacat cggtgcgtgc
     1141 caagagtttt tccgccagtt tcgccccttt atgcccttgc tcggcaaggt gacgcatttt
     1201 gtagcggttt aaagacatca agccggtttc cgagcctgaa aaaaatgcag agagtactaa
     1261 aagaatagct aaggtaataa ataaactact caggggaata ctgtccaaaa ttcaattcct
     1321 atgtaaatta atcataaaag gtagcgtaac actaaaagcg ttgtcactac ctcactttgt
     1381 cggttcagcc gacttgcaaa aaattttgct tttttgaccg cttgtagatc attaattgac
     1441 gatcaaacga ctaccgaaat agccgatggt gagcaacatc atacccgaaa tcgaataaat
     1501 aagcacccgt tttccacgcc aatgtaattt ccactgtcca agtaactgaa tgctataaac
     1561 aagccaagct aaaaaggaga aaattgcttt atgaatatgc tccggctcga aaaagttatg
     1621 caaataaacc acaccggaaa ataaagtgag cgtcagcata gcttgtgcag ctaaggttaa
     1681 agtaaagaaa tggcgttcaa ccgtcattag cggtggtaga atctggcaaa agaacattgt
     1741 tttgctcttt agttttctat ccagccattt gagttgaaaa gcataaatta atgctaaaaa
     1801 gaagagagca taagaaaata atgcaatccc taaatggaaa agcagtcccg cattttcttg
     1861 cacattacgg ataaaactac cttttacaaa tccagccacc cccacactac aaatggcgaa
     1921 agagtacaca ataattaaag gaaaccaaac cgttttccat tttaacaacg caagtgtgac
     1981 acaagccgcc ataatgaaac tcatcaaaga gattacattt gttaccgtaa aattctgccc
     2041 ttcgattaaa aataattcat tatataacac agaaaaatgc aaaatcgtgg caagtaaccc
     2101 aaacccaaag actaacatca tattaggctt tttattaact gttgcggcat tttctaaatt
     2161 cactagagta ggggcaaccc aaagtagcgc tagagcgtaa gcaacaatgg ataaaagagg
     2221 aagtaacata ttgtctcgaa tctcgtcaaa taagaataac tatcagaatt ttaatcaaaa
     2281 gtaaccgttt tagctagttt ttgctgttgc tagatcaaaa attatcctaa aaaatgtgct
     2341 tttcgcctta aattgaaccc taccttttct cggtaagatt atctcactga aaacaataat
     2401 tttcctttga ctaatttgct ttctatctgt aatatgcaca ccctatgcaa aaggtaaaac
     2461 taccccttac gattgaccct tacaaagatg ctcagcgtcg cgttgattat gaaggctaca
     2521 tttcaggtaa acttctaaca cgcttgggtg aatcagtatg taatgtgcaa agtgatgcac
     2581 aagtcactct ctcgttatat gtcgatccac aacgcctaac tgtgattaaa ggcacagcaa
     2641 aagtagatgt ggaatttgat tgccaacgat gtggtgaccc gtttacacaa acgctcgact
     2701 gttcatttgt tttcagtccg gtgtctaaca tggatcaggc ggacatcttg cccgaaattt
     2761 atgaacctat cgaagtaaac gagttcggtg aagtaaattt actagatatg attgaagatg
     2821 aatttattct tgaattacct ctagtcccga tgcatagtga agaacactgt gaagtgtccg
     2881 taagtgaaca ggtatttggc gagttgccgg aagaactggt acaaaaacca aacccgttcg
     2941 cagtattagc taatttaaag aaaaactaga tctaggagaa agcccgtggc tgttcaacaa
     3001 aataagaaat ctcgttcacg tcgtgatatg cgtcgttcac acgatgcatt aacaactgca
     3061 gcagtttcag tagataaaac cagtggtgaa actcactttc gccaccacgt aactgcagac
     3121 ggttactacc gtggtcgtaa agtaatcaac aagtaattcc tttcgaggtt tatcttggtt
     3181 gatatcactc ttgcagtaga tgtgatgggc ggggactttg gtccccgcgt tactattcct
     3241 gcactggaaa aagccttaaa acaaaatcca agcctttctt ttttattatt tggtgatgaa
     3301 caccaaatag cccctttatt acaaaaacac acactactca accaccccaa aatccaaatt
     3361 catcataccg aacaagtgat tgaagctgat gttccgttca ctactgcaat ccgccaaagc
     3421 aaaaacagct ctatgcggtt agcgattgag gcagtaaaag agggcaaagc acaaggttgt
     3481 gttagtggcg gtaacactgg tgcgttaatg ggattggcaa aattattgat tgaaccatta
     3541 ccaaatattg aacgccctgc actcacttcg ctaattccta ccctcaacgg caaatccagc
     3601 gtaatgttag atttaggggc aaatattgaa gtaagcaatc accagctaca acaatttgca
     3661 gaaatgggaa acctgtttgc tcaagtaatg cttgatttag tttaccctcg cctgtcttta
     3721 ttgaatattg gtacagaaga aaataaaggc acggcacaac ttcaggcagt gcatcaactg
     3781 ctgaaaaaca gacaagactt aaattacacc ggctttattg aaagcgataa attaaccagc
     3841 tatctcactg atgtgattat ttgtgacggc tacaccggca atatcgcgtt aaaagcgttg
     3901 gaaggggcag ctaaaaatat tatttctctc tttaaaaaag agaaagccga ttccaatatt
     3961 tgccgtaaca ccaaacgata tttactgaaa gcgatgttct accgttacta ccgcaaattg
     4021 caacaaatta accctgaccg ccataacggt gcgaccttgc tcggcttatc taaagtagtc
     4081 gtgaaaagcc acggcggggc aaatatcaat gccttttatt acgctattga ttatgcggtg
     4141 caacaaattc aaggcgacat tccaaataaa atcctagagg gtttaaccca aaaataagcg
     4201 aactcaactg ttcgcttatt ttcatttctt gtttcactta aagatacaag cggtcaaatt
     4261 tgcaaaaaaa tttacccatt caaccgcttg tgtttagcct tttaattttg ccactcgtaa
     4321 actaaccgca ttgcggtgtg catctagcaa ttctgcactt gccattcgtt ccaccgtttc
     4381 ggccaaggct agaaagcctt gtggtgtcag ctcctgcacc gtcattcgct tgctaaaatc
     4441 agctaaacct aagctcgaat aggttttagt gtagccgtaa gtcggtaaaa cgtggttagt
     4501 gccgctagca taatccccca tactttccgg cgaatacgcc cctaagaaaa tcgagccggc
     4561 attatctaaa tccgccaaca acgagcgagc attttcagtt tgcacaatta aatgctcggg
     4621 tgcatattta ttactaattt cgaccgcttg ttgcaggttt tccgcaataa aagtgcgact
     4681 gtgagccaat gctttacggg cagtttcggc acgaggtaaa accgccacct gcttttctaa
     4741 ttcttcatcg actgcccttg ccaagctctc acttggtgtg actaaaatca cttgggaatc
     4801 ggctccatgt tctgcttgag agagtaaatc gctcgccaca aatgcagggt cagcaaactc
     4861 atcggcaatc accaacactt ccgacgggcc tgccggcata tcaatcgccg tgccttcttg
     4921 cacaacttgg cgtttcgcct ccgtcacaaa cgcattgccc gggccgaaaa ttttatccac
     4981 tttcgctacc gtttgtgtgc catttgccat cgcaataatc gcttgagccc ccccaactgc
     5041 gtaaatcgtt tccaccccac acaaatgggc ggtgtagaga atttcatcgg caatcggcgg
     5101 tggtgagcaa agcacaatct tgttacaacc ggcaattttt gccggcactg caagcattaa
     5161 cacggtagag aaaagcgggg ctgaaccgcc cggaatataa agccccaccg cattaatcgg
     5221 gcgagtgatg acttggcaac acacccccgg ctgggtttca atatccacct cttgattttg
     5281 ctgtgccttg tggaaagcct cgatattcgc tttcgcattt tgaatcgctt gcttaagctc
     5341 tggtgaaata cggctctgtg cttgctgaat ctgctgttct gatacaacta agctctctaa
     5401 ttttacttta tcgaactttt cagctaattc aaataatgcc ttatcgccgt tggcaattac
     5461 attcgcttta atttcattaa ctgccgcttt aatactctcg ccaaccacct gtgccggacg
     5521 ggcaagatat tgctgctgct cagtttctgt taaattgttc caaattaggg tttgcatatt
     5581 tattcctttt acgccaacat tttctcaatc ggtaaaacca atacggaact tgcgcccatt
     5641 tcttttagct gctccattgt ttcccagaac aggttttctt ggctgacaac gtgcattgcc
     5701 acacgggttt ggtcgttagc taacggtaaa atagtcgggt tttccacacc gggtaataaa
     5761 gcggtaattt ccgccagttt gtctttgggg gcgtgcagca taatatactt agattcgttc
     5821 gcctgttgca caccttgaat gcgggttaat aatttatcca ctaacgcttg tttttccgct
     5881 gaaagtggtt cttggcgttg aattaggcaa gcagttgaac ggtaaatcac ttcaacctct
     5941 tttaatccgt tcgcctctaa tgttgcacct gaagaaacca agtcacaaat cgcattcgca
     6001 attccggcac ttggagcaac ttcaaccgaa ccggtgagta aaatactttt aaacggcaca
     6061 ttttgctctt tcatataccg ctttaataaa ttggggtaag aagtggcaat cacagcatct
     6121 tctaaatctt tgatattgtt ataattttta tcacgatcaa tagctaacga taaacggcag
     6181 ccaccaaaat ctaactgacg aagtttttta taggcaacat tctcaccagc acttaatcgc
     6241 cctaattcca cttcctctaa tacattttca ccgataatcc caagatcaac tacgccgtca
     6301 aaaactaagc ctggaatgtc gtcatcacgc acccgtaaaa tttcaatcgg catattttct
     6361 gaataggcaa tcaggcgttg atcgttccaa atgattttca cgccacattg tttaagcaac
     6421 tcactacatt cttggcttaa gcgacctttt ttctgcatcg caattcttaa tcgattttgt
     6481 gttgtcattg ttgtttcctt cttatgtttt aaattgtaaa aataaaaaaa cctctcgaaa
     6541 tcacttccga gagggttaaa tttatgctgc gtttaggcgt actcggaagt cttatcttcc
     6601 gcacatacca aatgcccgaa agattattca ggtaaatgat ggtggtgatg agtacgaata
     6661 aaagccattt tgttgttctc caaactaaat tgctttaaaa gatacgctta aattttggca
     6721 atgacaagtg ttttttgcga aaaaattgct atttttcatc tctctaaaac aactatcgca
     6781 aacgtttgcg taaagcggta taatttgcct gattttttgc aaattcaaca aagtaggaat
     6841 aacactatgc aaatcagcct caaaaagatc tactccggca aagtccgtga tctctacgaa
     6901 atcgatgaaa aacgtatgct tatggttgcc accgaccgat tatctgcctt tgatgttatt
     6961 ttagacgatc ctattcctcg taaaggcgaa atcctcaccc aaatctccaa cttctggttc
     7021 aacaaattag cccacattat gccaaaccac ttcaccggcg acagtgtgtt tgacgtgtta
     7081 ccgcaagaag aggcagaagc tattcaacat cgtgcggtgg tttgcaaacg cttaataccg
     7141 gtgaaaattg aatcgattgt gcggggttat ttaaccggct ccgggctgaa agattaccaa
     7201 caaaccggca cgatctgcgg cttaacattg ccggaaggct tggttgaggc cagcaaatta
     7261 ccgcaaccga tcttcacacc gtccagcaaa gccgaggtgg gcgatcacga tattaatatc
     7321 agctacgaag agtgtgaacg ccagatcggt caagaacttg ccgccaaagt gcgtgatgcc
     7381 gctctaaaac tctacactga agcggcaaac tatgccctga ccaaaggaat tattatttgc
     7441 gacaccaaat tcgaattcgg cttagacgaa aacggtgaac taacgctaat ggacgaagtc
     7501 ctaaccccgg attccagccg tttttggtca gttgaaacct accgagaagg cacaaatcca
     7561 ccttcatttg ataaacaatt cgtgcgtgac tggctggaaa atagcggttg gaacaaacaa
     7621 cccccagccc cgaaaatacc ggcagaggta attgaaaaaa ccgtagcgaa atatcaagaa
     7681 gcattggatt tattaaccaa ataacaccac aagcggtcaa atttacgcta ttttttgcaa
     7741 aacaaaaacc tgtaagccaa cacttacagg ttttttagtt agtggtaaaa agtgcggtta
     7801 ttctaccgca cttttgcaaa attttgtgta aatctgaccg cttgttagcc ttgcgaagaa
     7861 atacgtttca tatctgtcat ataaccacgt aattcttgac cgattaactc gattgggtgg
     7921 ttacggattg cgtcattcac atcacgtaag gtaacgttgt cgatttccac tgccggagtt
     7981 ggttcaccta aatcgccttt ctctaacgtt gggataattt tctccgctaa aatcggggtt
     8041 gcaacgtgag agaataagta gttaccgtat tctgcggtat ctgaaattac cacgttcatt
     8101 tcatataaac gcttacgagc gattgtattt gcgattaacg gtaactcgtg tagagactcg
     8161 tagtaagccg attcttcata aataccggct gaaaccattg tatcaaaggc taattcaacc
     8221 cctgctttca ccattgcaac cattaacaca ccgttatcaa agtattcttg ctcagaaatt
     8281 ttaataccgt ctgcttgtgg tgcgttttca aaggctgttt tacctgtttc ttcacgccat
     8341 tttaataagt tggcatcgcc gtttgcccag tctgccatca tcgttgatga gaactcacca
     8401 ctgatgatgt cgtccatatg tttttcaaat aagaacgcta attcttcttt gatttgctca
     8461 gaaagctcga acgcacgcaa tttggcactg tttgataagc gatccatcat taaggtgata
     8521 ccgccttgtt ttaacgcttc ggtaatggtt tcccaaccgt attggatcaa tttacctgcg
     8581 taagccggat ctttaccttc cgacactaat ttgtcgtagc acacgattga acctgcttgt
     8641 aacataccgc aaagaatggt ttgttcaccc attaaatcag atttcacttc tgctacgaat
     8701 gaagattcta atacgcccgc acggtcacca ccggtagcac ttgcccacgc tttcgcaatg
     8761 gctaaacctt cgcctttagg gtcattttcc gggtgaacgg caattaaggt tggcacaccg
     8821 aaaccacgtt tgtactcttc acgcacttcc gtgcccgggc atttcggagc ggtcatcaca
     8881 accgttaaat ccggacgaat ttgctcacct tcttccacaa tgttgaaacc gtgtgaataa
     8941 ccaaatgccg caccttgttt cattaacggc attacatcgg caactacttt agagtgctgt
     9001 ttgtccggcg ttaagttaat gactaaatcc gcttcaggaa ttaattgctc gtaagtaccc
     9061 accacaaagc cgttttcaga agcacgttta aatgaagcac gtttttcagc aatcgcttcg
     9121 gcacgtaaag cgtaagcaat atctaagcct gaatcacgca tatttaaacc ttggtttaaa
     9181 ccttgagcac cacaacccac aatcacgatt tttttgcctt ttaagaaatt gcagccatct
     9241 gcaaattcat cacgatccat aaagcggcaa cgacctaact ggtctaattt ttgacgtaaa
     9301 tttaaagtgt tgaaatagtt agccattttt taatccttat ttgaattaat gagattgata
     9361 tgatgttttg tttgcacatt gttatagttt gatttgatta taccttaacc taacattgcg
     9421 taaattgaaa atattaatat ttcatattgc ataaaatgca acttgcaaaa attttgccaa
     9481 atttaaccac ttgcaatctc tacgataaag tagaaaataa ccacctaatt taatagaaga
     9541 tcaaaaaatg aaaataaaca gaatcatttt acaaagctgt agcgaatgtg ggcaacaagt
     9601 gcgagtcccg ctcacgtcaa atggcaatgc cgtttgcccg gtctgccata atatattacg
     9661 caaaagcaat acttggagct tgcaccgtag tgcttttttg gcattagcca ttttaatttt
     9721 gcttcccttc gcacttactt ttcccttgat gagcattgac ttactcggca tcaaaattaa
     9781 tgctaccgta tgggacggta tttggaagat ggcaacggag ggctaccctt acaccgcttt
     9841 tatggtgcta gtctgcgcgg taataatgcc gattgcattt gtattgctaa ttttaaccat
     9901 tcagctacaa cgtattattc gccaacgccc ccgttacacg ctgattttct taactaaaat
     9961 aaaagaatgg gtaatgcttg atgtctattt agttgctctt gcggttgccg cttttaaaat
    10021 tcgagattat gccgatctac aattcgatat caacttaatc gcctttgtgt tggtaacact
    10081 cttaaacacc ctacttttta ttaaaaccga gccaaaacaa gcatgggaac gtttttaccc
    10141 agaatatcac gccttgccgt ttgatcaccc aagcaatcca acactttgcc cgacctgtga
    10201 atattgcttt gatgaaacta ttttagactt aaaaggacgg caacgctgcc ctcgttgtga
    10261 aagcaattta tctatttccg acaacgtaaa aatacaacgg gtttgggctt gcttaattgc
    10321 agggactatt atgatgattc cggcaaatat tttcccgatt tcgacaactg aactggcagg
    10381 tcaggtttcg gcagattcat taatgtccgg cgtgcttctg tttatggaaa tgggtagcta
    10441 caccgtggca gcgattgtgt ttatcgctag tattgcggtg ccggtgagca aaattaccat
    10501 tattttttat ctcttgctgg caattcatta caagtggaaa cacccgattc attggcaaat
    10561 gaaactacta cactacgtcc attttgtcgg acgctggtca atgctggatt tattcgtgtt
    10621 atcattgatg atgtcgctac tcgaacgagg gcagattctc agtttctcgg taggggaagc
    10681 cgctttctat tttggagcag ccgtattctt aacgatgttt gcctctgcaa atttagattc
    10741 cagaatgttg tggaagattc atactgtcca gaaaacatcc taaataaaga ttttccgata
    10801 aataatacat aacatgcaaa gtaagaaaag tagtacgtaa cccaaaatct caatccctat
    10861 tgagtaagaa agagccgata atgtagcacc gatagccaga aagaaattag caaatataaa
    10921 atagtcttta ctatatttac ttgaggcaat tagggtatcc attgcagtac taaagaacat
    10981 ttccaaatac gtgacaccca ctaatacaat aaataatgtt actatatttt gtgaaataaa
    11041 cataaataag ccacttaata taatacaaat aataaaagat aaaattagag aaaattgatg
    11101 tgttatcctt tt
//
LOCUS       DANMCL010000093        10634 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.094, whole genome shotgun sequence.
ACCESSION   DANMCL010000093 DANMCL010000000
VERSION     DANMCL010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10634
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.094"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..576
                     /locus_tag="PXF40_002235"
     CDS             <1..576
                     /locus_tag="PXF40_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HDL5803531.1"
                     /translation="GAYLEASEAQIFRGKYQEMEFVPNPDFDGPYYGLDFGFAQDPTA
                     AVKCWVFNGDLYIEFEAGKVGLELDDTADFIAKGVPQIADHVVRADSARPESISYLKR
                     HGLPRIIGVEKWKGSVEDGIEHIKSYGKVFIHPRCQQTLNEFRLYSYKTDRLSGDVLP
                     VVIDAHNHFIDALRYALTPLMQVKSAKGVLL"
     gene            573..1949
                     /locus_tag="PXF40_002236"
     CDS             573..1949
                     /locus_tag="PXF40_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HDL5803532.1"
                     /translation="MSLEQDRLAFLAEALGLGNIKRRTLWKEFGYPNTLTFNHFLKAY
                     KRNSIAFAAINRLLDGCWVDCPVIVEGEQKNESKQTTEWESKVERFMKRYWSAIKEAD
                     RRNLVGNYSALLLQVRDGQQWDQPILQGALSSIGEFGLVKLIPVWQSQLSVTEFQEDV
                     TADNYGEPLMYQFSESAFGKKSVSRNIKVHASRVILLNEGGDFNSPHSGVPLLEAGYN
                     KLVDLEKTSGGSAEGFLKNASRQLGIKLTKDVDLRQLEDSAKALGFSSFSDALNDKIK
                     KINSGTDSALITHEGDASVLSVAPADPKPTWEISANEFAASVQIPFTILFGQQTGRLA
                     SDEDKTDWANRCNGRRNGFLTDVITQLLNRLWFIGVLPMPKNSDVTVSWSDLLAPSEK
                     EKIANAQALASVATTSQSAFGFAAVTANEIRESLGFEPLPDNLIPPTIDDENEDQDEN
                     QATADSDK"
     gene            1903..2841
                     /locus_tag="PXF40_002237"
     CDS             1903..2841
                     /locus_tag="PXF40_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017357793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HDL5803533.1"
                     /translation="MKIKTKIKPLRIPTNKADPLNMGVSVAKLFRHIDVIYSQIKRSI
                     KQQILQKMSLRLQANNFEYFPSYLTATELADLLETLQKIIDKEILSNGSQGENLWFDS
                     YIDEAALKGTQSAVTDLGLQSEAYRSQRNLSSIVFSPAYFNRLAIAHMASYSEWQGLS
                     DELRKSLAGVITEAVLNGKNVKETAREIRQKLDVSSKRAKRIAQSSQLAAYRRAEWQE
                     AEEAKEELGLNTKLLHFSALKATTRLAHAQRHGKYFDVAEVREWYSRDGNQFNCYCKQ
                     SVVVVNADGKTDIEPLLVGLAKERKQWVGALKNVKK"
     gene            2828..4198
                     /locus_tag="PXF40_002238"
     CDS             2828..4198
                     /locus_tag="PXF40_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016533290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HDL5803534.1"
                     /translation="MSKNNVNIVTVINSKNISTESIDGDQHLIIRGVVPIVDDVVMND
                     GLYPADEINKSYNSLEGNFMPLGHPKIEGKYVSAQDVRAVNKHHVGAWAKNVRKESGK
                     VLVDMYINRRFAEGSEQGKTLLERLDGMVTNTNAEPIHVSTGLILNKVKQSGKSKGKK
                     YSWIATNMSFDHIAILLDVPGAATPDDGVGIFVNQDGSEMGVENVNLTQAADYRTEKL
                     FDKVRFYLMANSDLSFEEIHRALREAIRPEGKDKWSFWVEAVYPKYFIYSDDNSGKKY
                     KRSYFIDENDNVQLTSEPVEVVKKIGYEEITTNEEHNPMKTKILAVLNAANVKTEGLN
                     DDQLLEAYNKLQADKGKEPEKPKNEDDSEIDEKIKKAVNAAIEPLQQALQANTDKEQA
                     AMRAAVKAKFNMSDAAVNALQGEVLTELYAQTQQSVGLNNNSANGNGDNQWDGYSLNQ
                     EEKGNE"
     gene            4191..4625
                     /locus_tag="PXF40_002239"
     CDS             4191..4625
                     /locus_tag="PXF40_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803535.1"
                     /translation="MSNVIYRGSVKREPQTVNIVINDTSAPGAVVKLHNGKLEAAADL
                     KGRRFLLGNNRFKGQTIEQAYAKGDTATAFRLEPEQEYYAQIADGTYNFGDELTVKQA
                     GGKLTKAETGDVVLFFFDEESQRVISGGKGYADVVVANAYTK"
     gene            4640..5629
                     /locus_tag="PXF40_002240"
     CDS             4640..5629
                     /locus_tag="PXF40_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HDL5803536.1"
                     /translation="MLKFTKEQERFVINERINYDKKHALMAANSAGLLGNAMTLPKDV
                     WAEWDRDAVQIQREELVVFNDLAGISKSMPIGKLIHHFQTVSDSGSVNISLDGRSSAK
                     TDNVVLNYHGTPLPIIDSTFSFGWRDMSAAQSEGYQIDGAARANSLRKVAEKMEDLAL
                     NGDSSIVVGNAKLYGLRTAPNRMTNTHNLDLATATPKEIYDVFRDLISKFHAKNYYSP
                     VTLYVNYGDYFAMSTRDYSEQKSEGSILNKVMTIPQIAKIVPASRVPQNEILGLCKRS
                     DVYQVLNGMPLVTRPIARHNETDDYSFQIMAAVAVEFKFDDKGNAGYIQYTKS"
     gene            5641..5901
                     /locus_tag="PXF40_002241"
     CDS             5641..5901
                     /locus_tag="PXF40_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803537.1"
                     /translation="MKWLLTHDSHELKKGDVYEGETLPLWLVGKAIEIEEKSFEVATP
                     SDHADGETGETGETGETGETGETGETGETGETGQKGKKDKGK"
     gene            5904..6281
                     /locus_tag="PXF40_002242"
     CDS             5904..6281
                     /locus_tag="PXF40_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803538.1"
                     /translation="MAAEIELSEARTTLDELGFTSPNSLLELYVQQTNTLDQALNKSG
                     YSEETQKLIKLYLVAILAISSGARRIKSEGAPSGASRTFEYDPNALDNLKSAIRSIDP
                     KGCAESLLPKDKVVGFFDVVGGC"
     gene            6281..6625
                     /locus_tag="PXF40_002243"
     CDS             6281..6625
                     /locus_tag="PXF40_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803539.1"
                     /translation="MSNLSNWSYTAKATLWQAKGKNDDGVLVFSTPQIISCDYGADRK
                     RARFEIGREQAVKNVIWTEFAHAKLGDYVLIGESEQADPILAGAEEIIHIQRFADTFD
                     RNRDDFALITGG"
     gene            6627..6995
                     /locus_tag="PXF40_002244"
     CDS             6627..6995
                     /locus_tag="PXF40_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HDL5803540.1"
                     /translation="MGIKVKGIRQVKQRLNQVVGEVQSQKATRAMFRILNAVAPLAAH
                     YTPVDTSTLINSQFTEMEVNGTRLIGRVGYSANYAAYVHDPNIKQNFRKPSAKKEFLT
                     SALNESKATIKSIVKEELSL"
     gene            6992..7372
                     /locus_tag="PXF40_002245"
     CDS             6992..7372
                     /locus_tag="PXF40_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803541.1"
                     /translation="MISYVKAFKQWLEAHSLADGYVVQLYQWEDTQKAKPVIVIQPNS
                     GSPQVSDLSSEHYLLISLVAGKNSGYTIEERARAIMSKILVEPFASFGYIESMGGLPA
                     PIFTEDNRMIFRLPLRIISTNQEE"
     gene            7376..7858
                     /locus_tag="PXF40_002246"
     CDS             7376..7858
                     /locus_tag="PXF40_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803542.1"
                     /translation="MGSPSPQNNAENLVVGRAVVLEYGTTDAKPQESEWKVAGAMTTK
                     SWDFSPNSVTSEADDAGGFPETLITNSDFSISGDGEWRKRPKSKELGIKDLVVLYANA
                     VKNRTQPYIWVRLKYAGLTILGKMVITALSSEAPTNDLVKFSIEFKVGDSSTIEIAAA
                     "
     gene            complement(7898..8314)
                     /locus_tag="PXF40_002247"
     CDS             complement(7898..8314)
                     /locus_tag="PXF40_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HDL5803543.1"
                     /translation="MFYPALFTPAEEGGFVVTFPDLPEAITQGDTFEEAMEMAEDVLL
                     SCVEIYFDEDRRFPLTRPVNTDEVPVFMPESIYAKVLLHNTMQEQAVSKAEIARLTNI
                     RPPEVQRILAPRHITKIDTIGRILASLGKPLQLSLG"
     gene            complement(8370..8546)
                     /locus_tag="PXF40_002248"
     CDS             complement(8370..8546)
                     /locus_tag="PXF40_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010848235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HDL5803544.1"
                     /translation="MKQSEFLRWLKANGVEVENGSKHLKLYYKGKRSHLPKHPSQELK
                     TGLVEGVKKQLGLK"
     gene            8642..9313
                     /locus_tag="PXF40_002249"
     CDS             8642..9313
                     /locus_tag="PXF40_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803545.1"
                     /translation="MKMVSYPITEIGEMLIATDGRDFLFRPSFKNIYKIGSPQEIVKI
                     YALLHGCEIREILPHILTKSESHQSYFWSVLNSPVFGRKILQNAMIVMSCCCDDDISL
                     LIGEWLPSKSGVRYKLGKMPPETIINFAKNLMGHGVIGCCELPKKEQSAKNEFSESFD
                     AVEYISLARTHFNMSREDAENLTMTELQQLLKSQMPAENNSYGQFTEEEYDRIMAEYE
                     KRRAA"
     gene            complement(9328..9561)
                     /locus_tag="PXF40_002250"
     CDS             complement(9328..9561)
                     /locus_tag="PXF40_002250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803546.1"
                     /translation="MKKDCTKQDFANWLNENQEVCWIKEVSIERILSCVDDYVAICNA
                     RSKDEFELLNDIRELFYSAHYKDFTPVLSGRFF"
     gene            9730..10188
                     /locus_tag="PXF40_002251"
     CDS             9730..10188
                     /locus_tag="PXF40_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803547.1"
                     /translation="MKKMIVFVASVLSSFVIASDWEIIEAAQNKVKAELIRKSEKKAE
                     LCLNVAQAVLITNQKVQKDTFSMCGEFSTEIVFSDSKAYSLAVCGKVKGKDIIGNPIE
                     SDYIYQRATKDFYFNYNGKKSAYYDPQSDLARLQEVSDSMFNAMQNRYCK"
BASE COUNT         3210 a         2156 c         2498 g         2770 t
ORIGIN      
        1 ggtgcttatt tggaagcgag cgaagcgcaa atctttcgcg gtaaatatca agaaatggaa
       61 tttgtgccga accctgattt tgatggccca tattacggct tagattttgg tttcgcgcaa
      121 gatccgacgg cggcggtcaa atgctgggta tttaatggcg atctgtacat cgagtttgaa
      181 gcaggcaaag tgggcttaga acttgacgac accgcagact ttattgccaa aggcgtgcca
      241 caaattgccg atcacgttgt gcgtgcagat tcggcgcgtc ctgagtcaat tagttacctc
      301 aaacgtcacg gcttaccgcg cattatcggt gtggagaagt ggaaaggctc ggtggaagac
      361 ggcattgagc atattaagtc ctacggcaaa gtctttattc acccacgctg tcagcaaacg
      421 ctcaacgaat ttcgccttta ttcgtacaaa accgaccgct tatcgggcga tgtattgcct
      481 gtcgtgattg atgcccataa ccactttatt gatgcgctac gctacgcatt aacgccgttg
      541 atgcaagtta aaagtgccaa aggagtttta ctatgagcct agagcaagac agactggctt
      601 ttttagccga agccctaggg cttggcaata tcaaacgaag aacgttatgg aaggagtttg
      661 gctaccctaa taccttaaca ttcaaccatt tcttaaaagc ctataagcgc aatagtatcg
      721 cttttgcagc gattaaccgc ttacttgacg gttgttgggt tgactgcccc gtaatcgttg
      781 agggtgagca aaagaacgaa tcaaagcaga caaccgaatg ggagtccaaa gttgaacgtt
      841 ttatgaaacg ctactggtcg gcaatcaaag aggcagatag acgaaacctt gtcggtaact
      901 attcggcgtt attacttcaa gtaagagatg gtcaacaatg ggatcagcct attttgcaag
      961 gcgcgctatc tagcattgga gagttcggac tggttaaact gatccccgtg tggcagtcac
     1021 agctttcagt gacagagttt caagaggatg tgaccgccga taattacggc gaaccgctga
     1081 tgtatcaatt cagcgaatct gcctttggca aaaaaagcgt gtcacgaaat atcaaggttc
     1141 acgcaagtcg tgtaattttg ctcaatgagg gtggcgactt taattcccct cattctggag
     1201 ttcctctgct tgaggcgggt tacaacaagc tagttgatct cgaaaaaaca tcgggcggca
     1261 gcgccgaagg ttttctgaaa aacgcaagcc gacaattagg gatcaaatta acaaaagatg
     1321 ttgatttgag acagctcgaa gacagcgcaa aagcccttgg gttttcttca ttttctgatg
     1381 cgttgaacga caagatcaag aaaatcaact caggaacaga ctcagccttg attactcacg
     1441 aaggtgatgc ctctgtgttg tcagtcgcac cagcagatcc gaagccaacg tgggaaattt
     1501 ctgcaaatga gtttgccgcc tcagtacaaa tccctttcac gattttgttc ggacagcaaa
     1561 cagggcgatt ggcaagtgac gaggacaaaa ccgactgggc aaaccgttgc aacggtcgtc
     1621 gaaatggttt tctcaccgat gtgataacac aactacttaa tcgcttgtgg ttcatcggtg
     1681 tgctacctat gccaaaaaat agcgatgtca cagtgtcttg gtctgactta cttgcaccaa
     1741 gcgaaaaaga gaaaatcgca aacgcacagg ctttggcttc agttgcaact acatcgcagt
     1801 ctgcctttgg ttttgccgcg gtaacagcga acgaaatccg cgaatcttta gggtttgaac
     1861 ctctgcctga taatctgatt ccgccaacaa ttgacgacga aaatgaagat caagacgaaa
     1921 atcaagccac tgcggattcc gacaaataaa gccgatccgc tcaatatggg agtgtcggtt
     1981 gccaagctat ttcgtcacat tgatgtcatt tactcacaaa ttaagcgctc cattaagcaa
     2041 caaatcttgc aaaagatgtc actgcgactg caagcaaata attttgagta ttttccttcg
     2101 tatcttactg cgactgagtt ggcggatttg cttgaaacct tgcaaaagat tatcgacaaa
     2161 gagattttgt cgaatggttc tcaaggcgaa aatctctggt ttgactccta tatcgacgaa
     2221 gcagcactaa aaggcactca gtctgcggtc actgatttag gtctgcaatc agaggcttat
     2281 cgcagtcagc gaaacttatc atcaatcgtt ttcagtcctg cgtacttcaa ccgattggcg
     2341 attgcacaca tggcaagtta tagcgagtgg caaggtttaa gcgacgagtt gcgaaaatct
     2401 ttggcggggg tgatcacgga ggcggtttta aacggcaaaa acgtgaaaga aactgcccgt
     2461 gagattcggc aaaaacttga tgtgtcatca aaacgggcga agcgaatagc gcaatcaagc
     2521 cagttggcgg catatcgtcg ggcagaatgg caagaggcgg aagaggcaaa agaagaactt
     2581 gggctaaaca ccaagctctt acatttttca gcgctcaaag ctactacgcg attagcacac
     2641 gcccaacgcc acggcaaata cttcgatgtt gcagaggtgc gcgaatggta tagccgagac
     2701 ggcaaccaat tcaactgtta ctgcaagcag tctgtggttg tggtcaacgc cgacggtaaa
     2761 acagatattg agcctctcct tgttgggttg gctaaagaac gtaaacaatg ggtaggagca
     2821 ttaaaaaatg tcaaaaaata acgtgaacat cgtcaccgtc attaacagca aaaatatcag
     2881 cacagaatct attgacggag atcaacacct gattatccgc ggcgttgtgc cgattgttga
     2941 tgatgttgtg atgaacgacg gactttatcc tgcggatgaa atcaataaaa gctacaacag
     3001 cttagagggc aactttatgc cgcttgggca tccaaaaatc gaaggtaaat acgtttcagc
     3061 ccaagatgtt cgagcggtga acaaacatca cgtcggtgcg tgggcgaaga acgtacgcaa
     3121 ggaaagtggc aaagtgctgg tcgatatgta tatcaaccgc cgctttgcgg aaggttcaga
     3181 acagggcaaa accttgcttg aacgacttga cggaatggtg acaaacacca acgctgaacc
     3241 tattcacgtt tccacagggc tgattctaaa caaagtcaag caatcgggta aatccaaagg
     3301 caagaaatat agctggattg cgacaaatat gtcgttcgat catattgcaa tattgcttga
     3361 tgtgccgggc gcggcgacac ctgatgatgg cgtggggatt tttgtaaacc aagacggaag
     3421 cgaaatgggg gtggaaaatg taaacctaac acaagcggcg gattaccgca cagaaaagct
     3481 gtttgacaaa gtacgatttt acctgatggc gaactcagat ttatcgtttg aagaaattca
     3541 tcgcgcgctg cgtgaagcta ttcgccccga aggcaaagat aagtggtcat tttgggtcga
     3601 agctgtttac ccgaaatact tcatctattc ggacgataac agcggcaaga aatacaagcg
     3661 gagctatttt attgacgaaa atgacaatgt gcagctcact agcgaacctg tcgaagttgt
     3721 caagaagatt ggctacgaag aaattacaac caatgaggaa cataatccaa tgaaaaccaa
     3781 aatcttagcc gtgttgaatg cggcaaacgt gaaaacggaa ggcttaaatg acgatcagct
     3841 cttggaagcc tacaacaagc tgcaagcgga taagggtaaa gagcctgaaa agcctaaaaa
     3901 tgaagatgac agcgaaattg atgagaaaat caagaaagca gtcaatgccg cgattgagcc
     3961 actccagcaa gccttgcaag ctaatactga caaagagcaa gcagcaatgc gtgcggcggt
     4021 gaaagccaag ttcaatatga gcgatgccgc agtcaatgct ttgcaaggcg aggtattaac
     4081 tgagttgtat gcgcaaacgc aacaatcggt cggattaaac aataattcgg caaacggcaa
     4141 cggcgacaat caatgggatg gttactcact caaccaagag gagaaaggca atgagtaatg
     4201 taatttatcg cggttcggtc aagcgtgaac ctcaaacggt gaatatcgtg atcaacgata
     4261 cttcggcacc gggtgcagta gttaaactcc acaacggcaa attagaggcg gcggctgatt
     4321 taaaaggtcg ccgtttttta ttgggcaaca accgctttaa ggggcagaca atcgaacaag
     4381 cgtatgcgaa gggcgatact gcaacggcgt ttcgtttaga gcctgaacag gagtattacg
     4441 cgcaaattgc cgacggcact tataactttg gcgatgaact cacggtaaaa caagcgggcg
     4501 gcaaactgac caaagcggag acgggcgatg tagtgctatt tttcttcgac gaagaatcgc
     4561 agcgtgtaat cagtggcggc aaaggctatg ccgatgtcgt ggtggcaaac gcctacacta
     4621 aataagaggt aacaaagcaa tgttgaaatt cacaaaagaa caagaacgct tcgtgattaa
     4681 cgagcggatc aattacgaca aaaaacacgc gctaatggca gcaaattcgg cggggttatt
     4741 gggcaacgcg atgactttgc cgaaagatgt ctgggcggaa tgggatcgtg atgcagtgca
     4801 aattcagcgc gaagaattgg tggtgtttaa cgatttagcg ggcatttcaa aatcaatgcc
     4861 gattggcaaa cttattcacc atttccaaac ggtatctgat agcggttcgg ttaatatctc
     4921 attagacggt cgttcatcag cgaaaaccga taacgtggtg cttaactacc acggtacacc
     4981 gttgccgatt attgattcca ctttctcttt tggctggcgc gatatgtcgg cagctcaaag
     5041 cgaagggtat cagatcgacg gtgcagcacg cgcgaacagt ctccgcaagg tggctgaaaa
     5101 aatggaagat ctcgctttaa atggtgattc ctctattgtg gttggcaatg ccaagcttta
     5161 cggcttgcgt actgcgccaa atcgtatgac taacacacac aatctggatt tagccactgc
     5221 gacaccgaaa gaaatttacg atgtgttccg tgacttgatt agcaaattcc acgcgaagaa
     5281 ctactactct cctgtaacgc tttatgtgaa ctatggcgac tatttcgcaa tgagtacacg
     5341 tgattactcc gagcagaaat ccgaaggatc tatcttgaac aaagtgatga cgattccgca
     5401 aattgcgaaa atcgtgccag caagccgtgt accgcaaaat gaaattctcg gcttgtgcaa
     5461 gcgttcggat gtgtaccaag tgcttaacgg tatgccgtta gtgactcgtc cgattgcgcg
     5521 ccataatgaa accgatgatt actcgttcca aattatggca gccgttgccg tggagttcaa
     5581 attcgacgat aaaggcaatg ctggctatat ccagtacact aaatcctaag gcggtgcaaa
     5641 atgaagtggc tattaacaca cgatagccac gagttgaaga aaggcgatgt ttacgaaggc
     5701 gaaacattac cgctttggct tgtgggcaaa gctatcgaaa tcgaagaaaa atcctttgaa
     5761 gttgcaacgc cttctgatca cgctgacggc gaaactggcg aaactggcga aactggcgaa
     5821 actggcgaaa ctggcgaaac tggcgaaact ggcgaaactg gcgaaactgg tcagaaaggc
     5881 aaaaaagata aaggcaaata actatggcag cagaaataga gctatccgaa gcgcgaacaa
     5941 cgcttgacga actgggtttc acttcgccga actctctgct tgagctttac gttcagcaaa
     6001 cgaacacctt agaccaggcg ttgaacaaat cggggtacag cgaagaaaca cagaaactga
     6061 tcaagctcta tctggttgct attcttgcaa tttcatctgg ggcgcgccgt ataaagtcag
     6121 aaggtgcgcc tagcggtgca agccgaacgt ttgagtatga tccaaacgcg ctagacaacc
     6181 ttaagtcggc gattcgctca attgatccga aaggttgcgc tgaaagtttg ctacccaaag
     6241 ataaagttgt cggctttttc gatgtggtcg gaggctgcta atgtcaaatt tatcgaattg
     6301 gtcctacacc gcaaaagcca cgctttggca ggctaaagga aagaacgatg acggcgtttt
     6361 agttttttct acgccacaaa tcatttcctg tgactacggt gcagatagaa agcgcgcacg
     6421 ttttgagatt gggcgtgaac aagcggtcaa aaatgtgatc tggacggagt tcgcccacgc
     6481 caaattaggc gattatgttc tgattggcga aagcgagcaa gccgatccga ttttggctgg
     6541 cgcagaggaa attattcata tacagcgctt tgctgatacg ttcgaccgca atcgtgatga
     6601 ttttgcgctg ataacaggcg ggtaaaatgg ggatcaaagt aaaaggcata agacaggtca
     6661 agcagcggct gaatcaggtt gttggcgagg ttcagagcca aaaagcaact cgggcaatgt
     6721 ttcgcatttt gaatgcggtt gcccctcttg cggcgcacta tacgcctgtt gatacctcaa
     6781 cgttgatcaa cagtcaattc actgaaatgg aagtgaacgg cacacgcttg attggaagag
     6841 tgggttattc tgctaattat gcggcttacg ttcacgatcc taatatcaag caaaacttcc
     6901 gcaagccttc agcgaagaaa gagtttttga cttccgcgct gaacgaatca aaggctacga
     6961 tcaaatccat tgttaaagag gagttgtcac tatgatttct tatgtcaaag ccttcaaaca
     7021 atggttagag gctcactctc ttgcagacgg ctatgttgtg cagctttacc agtgggagga
     7081 tacgcaaaaa gccaagcctg ttattgttat tcagccaaat agtggttcgc cgcaagtttc
     7141 tgacctgagc agcgaacact atctgctaat tagccttgtt gcaggtaaaa attcaggtta
     7201 cacaatcgaa gagcgagcaa gggcgattat gtcaaagatt ttagttgagc ctttcgcttc
     7261 ctttggttac atcgaatcaa tgggcggatt acccgcccca attttcaccg aagataatcg
     7321 aatgattttt cgcttaccac ttcggattat ttcaacaaat caagaggagt agtttatggg
     7381 ttctccatct ccacaaaata acgcagaaaa tctcgtggtg gggcgtgccg tagttttaga
     7441 gtacggtacg actgatgcaa agccacaaga aagcgaatgg aaggttgcgg gcgcaatgac
     7501 gacaaagagt tgggatttta gcccaaattc ggttacatca gaggctgatg atgctggcgg
     7561 cttccctgaa accttaatta caaactcaga ctttagtatt tctggtgacg gtgagtggcg
     7621 caaacgacca aaatcgaaag aactaggcat caaagatcta gttgtgttat acgcaaatgc
     7681 ggtaaaaaat cgcacccaac cttacatttg ggttcgtttg aaatacgcag gcttaacaat
     7741 tctcggaaaa atggttatca ctgcattaag tagcgaagcc ccaaccaatg acttagtgaa
     7801 attctctata gagttcaagg ttggcgattc aagcactatc gaaattgctg cagcgtaaaa
     7861 aatcccaccc tctataacaa gagcggtggg attatcatta tcctagggat agttgtaggg
     7921 gctttcctaa gctagccaaa atacgaccaa tagtgtcgat ttttgtaata tggcgagggg
     7981 ctaaaattcg ctgtacttct ggcggacgga tattagttaa tcgggcaatt tctgccttgc
     8041 ttaccgcttg ttcttgcatt gtattatgca aaagcacttt tgcgtagatg ctctctggca
     8101 taaacacagg cacttcgtcg gtatttactg ggcgagtgag cggaaagcgt ctatcttcat
     8161 cgaaataaat ttcaacacaa gatagtagca cgtcttctgc catttccatt gcttcttcaa
     8221 atgtatcgcc ttgggtgata gcttctggca aatcaggaaa tgtcactaca aagccccctt
     8281 cttcagcggg ggtaaataac gctggataaa acatattttc tccttattca agggtgtagt
     8341 gaaagcccct taacatcagg ggctttatat tattttaagc ctagttgctt tttaacccct
     8401 tccactaagc ctgtttttaa ctcttggctt gggtgtttgg ggaggtggct tcttttgccc
     8461 ttgtagtaga gtttcaaatg ctttgatcca ttttcaacct ctaccccatt agcctttagc
     8521 caccttagga attcgctttg cttcactacc tcctcctatt tgtttaactt gggttcatta
     8581 tatgcaaaaa tgctaacttt gtcaacagaa agttagcaaa aatgctaatt tttttgttga
     8641 ggtgaaaatg gttagctatc caattactga aattggtgaa atgcttattg caaccgatgg
     8701 gcgagacttt ttattcagac cgagtttcaa aaatatctac aaaattggaa gcccacaaga
     8761 aattgtaaaa atctatgcac tattgcacgg ctgtgagatt cgagagatat tgccgcacat
     8821 tttaaccaaa tcggagtctc atcaatctta cttttggtca gtgctgaatt cgcctgtttt
     8881 tggcagaaaa attctgcaaa acgcaatgat cgtgatgtcg tgctgttgcg atgatgatat
     8941 ttccctgttg attggcgagt ggttgccgtc aaagtctggc gttaggtaca agttgggtaa
     9001 aatgccacct gagacaatta tcaattttgc aaaaaattta atgggtcacg gagtgattgg
     9061 ttgctgcgaa ttgccaaaga aagaacaatc tgcaaaaaat gaattttcag aaagttttga
     9121 tgctgttgag tacataagtt tagcccgaac tcatttcaat atgagccgcg aagacgctga
     9181 aaatctcacg atgaccgaat tgcagcaact tctaaaaagt caaatgcctg ccgaaaataa
     9241 tagctatgga cagttcaccg aagaagagta cgacagaatt atggcggaat atgagaaaag
     9301 aagagcggct taaatagccg ctaacattta aaagaaccta cctgatagaa cgggagtgaa
     9361 atccttgtaa tgtgctgaat aaaaaagctc tcttatgtca ttgagtagct caaattcatc
     9421 tttggatctt gcgttgcaga ttgccacata gtcatctacg caggataaaa tacgttcaat
     9481 actgacttct tttatccagc atacttcttg gttttcattc agccagttgg caaagtcttg
     9541 tttagtgcag tcttttttca taagttctcc tttttgatta tttgcaaaaa aaatcatatc
     9601 aaatcatccg ttgttatcta ttggcgaaaa taatttttgc gacacagatc gcaaaaatag
     9661 gttttgacgg tggaaaaacg aatcttaatt cgtagaatgg taaaatttct ttatttttaa
     9721 ggtattttta tgaaaaaaat gattgttttt gtagcttctg ttttgtcatc ttttgttatt
     9781 gcatcggatt gggaaataat agaagcggct caaaataagg tgaaagcaga gcttataaga
     9841 aaatcagaaa aaaaagcaga gttatgttta aatgttgctc aggctgtctt aattactaat
     9901 caaaaagtac aaaaagatac tttctcaatg tgtggtgaat tttcgacaga gattgtcttt
     9961 tctgactcta aagcatatag ccttgcagta tgtggaaagg ttaaaggtaa agatattatc
    10021 ggaaatccga tagagagcga ctatatatac caaagagcaa ctaaggattt ttactttaat
    10081 tataatggca aaaaatcagc ttattatgat cctcaatctg atcttgcaag gcttcaagag
    10141 gtctcagact ctatgtttaa tgctatgcaa aatagatatt gtaagtgatg cttgcattgg
    10201 tttttaaata tttaactcaa ataatttatg tgtttttagt ttaatagggc gatttatgga
    10261 tgtaaaggta attaacgtct tactaattat tcttttttca gcaattgtaa taggtttatt
    10321 cctttttcaa gaatcaagat taagagatcc aaacaaccat tcagtgatat atttagagca
    10381 gattcaagaa atgtgcagct tagataaaat aggctcatac cagattgatt ttgtacgaca
    10441 aagtgggaat gagtacaaag agagtattct tgttaatgat tttgagttag caataaaaac
    10501 cgtattatcc acgttaagaa gggcaaaaat agatagtgtg ccagtaatat ctaacacact
    10561 tatttattat ccaccgagct ttctacaacg caagaggtag tcaagaagga aagaaattag
    10621 gatcgataag gatt
//
LOCUS       DANMCL010000094        10462 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.095, whole genome shotgun sequence.
ACCESSION   DANMCL010000094 DANMCL010000000
VERSION     DANMCL010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10462
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.095"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            139..1413
                     /gene="nadR"
                     /locus_tag="PXF40_002252"
     CDS             139..1413
                     /gene="nadR"
                     /locus_tag="PXF40_002252"
                     /EC_number="2.7.1.22"
                     /EC_number="2.7.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional transcriptional
                     regulator/nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide kinase NadR"
                     /protein_id="HDL5803548.1"
                     /translation="MTDFAYLQQKRKQLKLKVNDICEQAGVTRAYFNQLVSGKIKNPS
                     ANKLKALHSVLDIVEDSNQRSGVIFGKFYPIHTGHINMIYEAFSKVDVLHVIVCTDSE
                     RDLRLFQESKMKRMPTNEDRLRWVQQIFKYQQKQIFIHHLVEDGIPSYPNGWEDWSGR
                     VKALFEEKSINPTIVFSSEIQDKESYEKYLNLEVQLVDPTRESFNISATQIRNNPFQY
                     WRFIPKEVRPFFVKTIAILGGESSGKSVLVSKLANVFNTTSAWEYGREFVFEQLGGNE
                     QAMQYSDYPQMVLGHQRYVDYAMKHAHKVAIIDTDYITTQAFCIQYEGKAHPFLDSMI
                     REYPFDVTILLSNNTKWVADGLRSLGSKKQRQQFQHLLKKLLEKHHIPYIKIESPSYL
                     DRYNQAKEVVEAILNEEPIPLQFKQYNIHEFE"
     gene            1431..2123
                     /locus_tag="PXF40_002253"
     CDS             1431..2123
                     /locus_tag="PXF40_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5803549.1"
                     /translation="MILFAGDPHGSYEHLYPILQQQTEEVALVILGDLQLTTPDELDR
                     LSQYCDIWFIHGNHDSKTVAAFDAIWNSSWKERNIHGKVVDIQGIKIAGIGGVFRGHI
                     WMPPNRPMFFDPIHFCQYSAPEKIWRGGIPLRHRSSIFPSDFEALENEKADILITHEA
                     PKPHPQGFSVINQLARKLGASKIFHGHYHDNFNYGNLNVSRECAIYNIGFRSLADING
                     NYLILGVDDREK"
     gene            2256..2978
                     /gene="arcA"
                     /locus_tag="PXF40_002254"
     CDS             2256..2978
                     /gene="arcA"
                     /locus_tag="PXF40_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HDL5803550.1"
                     /translation="MKIPQILIVEDELVTRNMLKSIFEGEGYQVFQASNGEEMHSVLS
                     TNEINLVLMDINLPGKNGLILAREIRENMKLPLMFLTGRDNEIDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLQRTMIDKENDVVKEQSEIESYRFNGWILDINSHSLISPEGEV
                     NKLPRSEFRALLHFCQHPGKIQTREDLLKKMTGRELKPHDRTVDVTIRRIRKHFEDHP
                     NTPEIIVTIHGEGYRFCGNIEP"
     gene            2998..3516
                     /locus_tag="PXF40_002255"
     CDS             2998..3516
                     /locus_tag="PXF40_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin family protein"
                     /protein_id="HDL5803551.1"
                     /translation="MKKLTIVALTCLFSTHLLAAPVGNTFTGIGVGVDVTTTKYKVEG
                     VKGKDSTGPALVVDYGIEQGNNFVGVVQGKAKVGSTKVFSDVKQKNKYTIAYQQGYRV
                     GSDLLPYVKVDASSSKIGNETYRGFGFGAGAKYAVSSDVELGAEYTRDNLKRSGTKLK
                     GNAFTANATYRF"
     gene            complement(3594..4823)
                     /gene="serA"
                     /locus_tag="PXF40_002256"
     CDS             complement(3594..4823)
                     /gene="serA"
                     /locus_tag="PXF40_002256"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HDL5803552.1"
                     /translation="MAKISLDKSKIKFLLLEGVHQNAIDVLLAAGYTNIEVHKKALDG
                     QELIDAIKDAHFVGIRSRTFLTEEVLAQAPKLIAIGCFCIGTNQVDLNAAKRRGIPVF
                     NAPFSNTRSVAELVLAEMILLMRKVPTANAEVHRGVWNKSAAGANEVRGKKLGIVGYG
                     HIGSQLSILAEAIGMQVYFYDVENKLPLGNAQQVPTLEHLLSTCDMISLHVPEIDSTK
                     NLMSAERIAQLKEGSVLINAARGTVVDLDALAARIEDGSLRGAAIDVFPEEPASINDP
                     FVSPLCKFDNVILTPHIGGSTSEAQANIGTEVANKFVKYSDNGSTVTAVNFPEVSLPL
                     HTNTKRLLHIHENRPGMLNQINQIFVESNVNIAAQYLQTDAAIGYVVIDVESDNVDEA
                     LQRLKAIEGTIRARVLY"
     gene            complement(4860..5519)
                     /gene="rpiA"
                     /locus_tag="PXF40_002257"
     CDS             complement(4860..5519)
                     /gene="rpiA"
                     /locus_tag="PXF40_002257"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HDL5803553.1"
                     /translation="MDQQEMKKIAAQAALKFVKPDTIVGVGSGSTVNCFIDALASMKD
                     EIKGAVAASKASEQRLRDIGIEVFSANEVTELDVYIDGADEITPQGAMIKGGGAALTR
                     EKIVSSLAKKFICIVDKSKQVDVLGSTFPLPVEVIPMARSYVARQLVALGGSPEYREG
                     VVTDNGNVILDVHNFKIMEPLKMEHTINNIAGVVTNGIFAQRFANVTIVGTPEGAVIL
                     E"
     gene            complement(5664..6998)
                     /gene="glmM"
                     /locus_tag="PXF40_002258"
     CDS             complement(5664..6998)
                     /gene="glmM"
                     /locus_tag="PXF40_002258"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HDL5803554.1"
                     /translation="MARKYFGTDGVRGEVGKFPITPEFALKLGWAAGKVLATQGTKKV
                     LIGKDTRISGYMLESALEAGLTAAGLSAVFVGPMPTPAIAYLTRTFRAEAGIVISASH
                     NPYYDNGIKFFSSVGEKLPDEIEEAIEAMLDKPMDCVDSANLGRASRINDAAGRYIEF
                     CKGTFPSELSLEGYKIVVDCANGATYHIAPNVMRELGAEVLEIGTKPDGLNINEKCGA
                     TDIKALQKVVVEAGADVGLAYDGDGDRLIMVDHLGNKVDGDQILFILAREALRSGKLQ
                     GGVVGTLMSNMSLELALKELAIPFSRANVGDRYVLEQLKEKGWKLGGENSGHIIVLDK
                     NTTGDGIIASLQVLAAMASHKLSLNDLAKAVPLFPQVLLNVRFEKGAANPLESNEVKA
                     VAADVEKRLAGKGRILLRKSGTEPLIRVMVECEDAVLAQSCAEEIVEAVKRN"
     gene            complement(7024..8556)
                     /gene="ilvA"
                     /locus_tag="PXF40_002259"
     CDS             complement(7024..8556)
                     /gene="ilvA"
                     /locus_tag="PXF40_002259"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HDL5803555.1"
                     /translation="MMNETQHSQSAIDYLRSILSSNIYDLAQVTPLQKMEKLSERLGN
                     SIFIKREDRQPVHSFKLRGAFAMISNLSKAQKEAGVIAASAGNHAQGVALSAKHLGLR
                     ALIVMPQNTPAIKVDAVRGYGGEVLLYGANFDEAKAKAIELSTELGMTFIHPFDSPAV
                     IAGQGTIGLELVQQKPDLDYVFIPVGGGGLIAGIAVLIKQVMPNIKVIGVESKDSACL
                     YHALKQGQPTDLERVGLFADGIAVKRIGDETFRLCQQYVDDVVLVDNDEICASMKLIF
                     ENVRAISEPSGATSLAGLKKYVKEHQLQDKNLACILSGANVNFHTLRFVSERCEIGEK
                     REALLAVTIAEQKGSFLKFCEILGNRAVTEFNYRHSDDKQACIFVGVRISGSAEKVEI
                     IKDLQQNGYDVADLSDDDIAKTHIRYMVGGRASSIQYEQLYSFEFPEQKGALLKFLQM
                     LTNWDISLFHYRAHGADYGDILAAFALNRGDEVELNRHLEQLGYRFQNVSESPAYQYF
                     LK"
     gene            complement(8817..9410)
                     /gene="slyD"
                     /locus_tag="PXF40_002260"
     CDS             complement(8817..9410)
                     /gene="slyD"
                     /locus_tag="PXF40_002260"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015674369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HDL5803556.1"
                     /translation="MNITKDLVPSIAYQVRTQEGVLVDEAPVNQPLEYLHGHNNLVEG
                     LEKALEGKAVGDVFEVRVKPEEGYGEYNDNMVQRVPKDVFMGVDELEVGMRFIADTDL
                     GPLPVVITEVDGDEVVVDGNHMLAGQELLFSVEVVGIREATAEEIAHGHVHGGHEHGC
                     GCGGHDHHHDHDGCCGGHDHDHHHHHGHGGCGCGGHH"
     gene            complement(9513..9653)
                     /locus_tag="PXF40_002261"
     CDS             complement(9513..9653)
                     /locus_tag="PXF40_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803557.1"
                     /translation="MKKLIKVCGLISATIFLSGCLVTSVVGGVVGTAVDVVDTVTPDI
                     ID"
     gene            complement(9725..10411)
                     /gene="aqpZ"
                     /locus_tag="PXF40_002262"
     CDS             complement(9725..10411)
                     /gene="aqpZ"
                     /locus_tag="PXF40_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HDL5803558.1"
                     /translation="MKKYFAEFFGTFWLVFGGCGSAVLAAGIPELGIGYAGVSLAFGL
                     TVLTMAYAVGHISGGHFNPAVSIGLLVGGRFNAKDLVPYIIAQVIGAIAAGAVLYTIA
                     SGVPTFDATAGFAGNGYGEHSPHGYSLTAALLIEVVLTAFFLIIIMGATDKRAPAGFA
                     PIAIGLALTLIHLISIPVTNTSVNPARSTGVALFQGSWAIEQLWLFWVAPIVGAIIGA
                     VVYRFIAEEK"
BASE COUNT         3144 a         2311 c         1974 g         3033 t
ORIGIN      
        1 ttttttagtg ctgaaagtgg tcgtgtagct aattattaaa gcaaagatat gctataaaac
       61 tgctatttat acaataaaaa tatattcaaa tgctacattt tactatatga taatcatcaa
      121 aaaatcgagg gaatcattat gacagatttt gcttatcttc aacaaaagcg caaacagctt
      181 aaactcaaag tgaatgatat ttgtgaacaa gctggggtaa cccgagctta ttttaatcag
      241 ttagtaagcg gaaaaatcaa aaatccaagc gccaataagc ttaaagcctt gcattccgtt
      301 ttagatatcg tagaagatag caaccagcgt tccggggtta tttttggcaa attctatcct
      361 attcacacag gtcatattaa tatgatctat gaagcattta gtaaagtaga tgttttacat
      421 gttattgttt gtaccgattc tgaacgggat ttacgtcttt tccaggaaag taaaatgaaa
      481 cgaatgccga caaatgaaga tcggctacgc tgggtacagc aaatttttaa ataccaacaa
      541 aaacagatct ttattcacca tttagttgaa gacggtattc cgagctatcc aaatggctgg
      601 gaagattggt ctggtcgtgt taaagcgcta tttgaagaaa aaagcattaa tcctactatt
      661 gtttttagta gtgaaattca agataaagaa tcttatgaaa aatatttgaa tctagaagtt
      721 caacttgtcg atcctactcg tgaatccttt aatatttcag caacacaaat tcgtaataat
      781 ccttttcaat actggcgctt tattccgaaa gaagttcgtc ctttctttgt taaaactatt
      841 gcgattttag gtggtgaaag cagtggtaaa tcagtgttgg tgagcaaatt agcgaatgta
      901 tttaacacta cctctgcttg ggaatatggg cgtgagtttg tgtttgagca acttggtggc
      961 aatgaacaag caatgcaata ttccgactat ccgcaaatgg tgcttggaca tcaacgctac
     1021 gttgattatg ccatgaaaca tgctcataaa gtggctatta ttgataccga ttacatcaca
     1081 actcaagcgt tctgtattca gtatgaaggg aaggctcacc cgtttctgga ttcaatgatc
     1141 cgcgaatatc cttttgatgt gacgatttta ctttctaaca atacaaaatg ggtagccgat
     1201 ggtttacgca gtttaggatc gaaaaaacag cgtcaacagt ttcaacacct actgaaaaaa
     1261 ctactagaaa aacaccatat tccttatatt aaaattgaat ctccaagtta tttggatcgc
     1321 tacaatcaag ccaaagaggt ggtagaagct attttaaatg aagaaccaat cccattacag
     1381 tttaagcaat ataatattca cgaatttgaa taactgccac aggaaataac atgatacttt
     1441 ttgcaggcga tccacacggt agctacgagc atctttatcc gattctacaa cagcagacgg
     1501 aggaggtagc tttagttatt ctaggcgatc ttcaattgac tactcctgat gaattagatc
     1561 ggctttcgca gtattgtgat atttggttta ttcatggtaa ccatgacagt aaaaccgttg
     1621 ctgcctttga tgctatttgg aatagtagct ggaaagaacg caatattcac ggtaaagtag
     1681 ttgacattca aggaataaaa attgcaggta ttggaggggt cttccgaggt catatttgga
     1741 tgccgcccaa tcgtccaatg ttttttgatc ccatccattt ttgccaatac tctgctccgg
     1801 aaaaaatttg gcgtggtggt attccattaa ggcaccgctc ttcgatcttc ccttctgatt
     1861 ttgaagcatt ggaaaatgaa aaagccgata ttttaattac acacgaagca ccaaagccac
     1921 accctcaagg cttctctgta atcaaccagc tagcaagaaa attaggggcg agcaaaattt
     1981 tccatggcca ctaccatgat aattttaatt atggcaatct aaatgtcagc agagaatgtg
     2041 ctatttataa tatcggcttt cgtagcctag cggatattaa tggaaattat ctaattttag
     2101 gtgttgatga tcgagagaaa tagccaaaaa tttgactgaa ttaaacaaat tgtcatttta
     2161 cccttcccat tcataaattt ataagtaaaa tgcgagaaat ttgtaacata aacgttatta
     2221 aacagaattt ataaattaaa tcagaggttt aaaagatgaa gatcccacaa atcttaattg
     2281 ttgaggatga gttagtaaca aggaatatgc tgaaaagcat ttttgaagga gaaggatatc
     2341 aggtatttca agcatctaac ggcgaggaaa tgcactctgt tctgagtaca aatgaaatca
     2401 atcttgtgct aatggacatt aacttaccgg gaaaaaatgg attaattctc gcccgagaaa
     2461 ttcgagagaa tatgaagcta ccattaatgt ttttaaccgg tcgcgacaat gaaattgata
     2521 agatcctcgg tttagaaata ggtgccgatg actatatcac taaaccgttt aatcctcgag
     2581 aattgactat ccgagcgaga aatttattgc aacgaacgat gatagataaa gaaaacgacg
     2641 ttgtaaaaga gcaatctgaa attgaaagct atcgctttaa cggttggatc ttagacatta
     2701 acagtcatag tttaatctca ccagaaggtg aggtaaataa attaccacgt agtgaattta
     2761 gggctttatt acatttttgc caacatcctg gaaaaattca aacacgtgaa gatttattga
     2821 aaaaaatgac cgggcgggaa ctaaaacctc atgatagaac cgttgatgtt actattcgcc
     2881 gtattcgtaa acattttgaa gaccacccca ataccccaga aattattgtc accattcacg
     2941 gtgaaggcta ccgtttctgt ggtaacatcg aaccttaatc aagataggag taattttatg
     3001 aaaaaattaa ctattgtcgc attaacttgc ttattttcta cccatctatt agccgctcct
     3061 gtcggaaata catttactgg catcggtgtc ggtgtagatg taactacaac aaaatacaaa
     3121 gttgaaggag taaaaggcaa ggattccaca ggtccggcat tagttgtcga ttatggtatt
     3181 gagcaaggca ataactttgt aggcgttgta caaggaaaag caaaagtagg tagtacaaaa
     3241 gtatttagcg atgtaaaaca aaaaaataaa tatactatag cttatcaaca aggttatcgt
     3301 gttggatccg atttattacc ttatgtaaaa gtagatgcca gctcaagcaa aatcggtaat
     3361 gaaacctatc gtggctttgg tttcggtgct ggtgcaaaat atgcagtttc aagcgatgtt
     3421 gaattaggtg cagaatacac tcgcgataat ttaaaacgta gcggcacaaa attaaaaggt
     3481 aacgctttca ccgcgaatgc aacttatcgt ttctaatctt agcggtaaag ttttctgaaa
     3541 aaataaccgc ttgtaacaca aaagagcctg aagtgattca ggctctttgc cttttaatat
     3601 aatactcggg ctcgaatcgt gccttcgatc gcttttaaac gttgtaatgc ttcatcaaca
     3661 ttgtcgctct ctacatcaat tacaacataa ccgatagctg catcggtttg taaatattga
     3721 gcggcaatat tcacatttga ttccacaaaa atctggttaa tttgatttaa catacctggg
     3781 cgattctcgt gaatatgtaa taaacgtttg gtattagtat gaagcggtaa ggatacttca
     3841 gggaaattca ctgccgtcac ggttgaaccg ttatctgaat atttcacaaa tttattggca
     3901 acttcggtgc cgatatttgc ctgagcttca gaggttgaac caccaatatg tggcgttaaa
     3961 atcacgttat caaacttgca caatggtgac acgaacgggt cattaattga tgccggttct
     4021 tccggaaata cgtcaatcgc cgcaccacgc aatgagccgt cttcaatccg agcggctaat
     4081 gcgtctaaat cgaccactgt accacgagcg gcattaatta acaccgagcc ttcttttaat
     4141 tgagcaatgc gttctgcact cattaggttt ttagtcgagt cgatttccgg aacgtgtagt
     4201 gaaatcatat cgcaggttga aagcaaatgc tctaatgtcg gcacttgctg tgcattaccg
     4261 agtggtagtt tgttttcaac atcatagaaa taaacctgca taccaatggc ttcggcaaga
     4321 atactaagct gtgaaccgat atgaccatat cccacaatac ctaatttctt gccacgtact
     4381 tcgtttgcac ctgctgccga tttattccac accccacgat gcacttccgc atttgcagtc
     4441 gggactttac gcattaataa aatcatctct gccagcacta attctgccac cgagcgggta
     4501 tttgagaacg gtgcattgaa taccggaata cctcgtcttt tcgccgcatt caaatcaact
     4561 tggtttgtac cgatacagaa acaaccaatc gcaattaatt tcggagcttg agccagtact
     4621 tcttcggtta aaaaagtacg cgagcgaata ccaacaaagt gtgcatcttt aattgcatca
     4681 attaattctt gaccgtctaa tgctttttta tgcacttcaa tattggtata accagccgct
     4741 aagagtacat caattgcgtt ttgatgtacg ccctcaagca gaaggaattt gatcttggat
     4801 ttatccaaag aaattttagc cattttttgc tcctaagtat ttgtatttgc aataataaat
     4861 tattctaaaa taactgcacc ttcaggtgtg ccgacaatgg ttacattggc aaaacgttgt
     4921 gcaaaaatac cgttagtcac cacgcctgca atattattaa tggtatgttc cattttcaac
     4981 ggctccataa ttttaaagtt atgtacatct aaaatcacat tgccgttatc agtgaccacg
     5041 ccctcacggt attccggcga accacctaag gctacgagct gacgagccac ataagaacga
     5101 gccattggga tcacctccac cggcagaggg aaagttgaac ccagcacatc aacttgtttg
     5161 gatttatcca caatgcagat aaattttttc gctaatgaac tcacgatttt ctcacgggta
     5221 agtgctgccc cgccaccttt aatcatcgcc ccttgtggcg tgatttcatc agctccgtca
     5281 atatacacat ctaattccgt cacttcattg gcactgaata cttcaatgcc gatatcacgc
     5341 aaacgctgtt ccgaggcttt agaggcagca accgctcctt taatctcatc tttcattgaa
     5401 gcaagggcat caataaaaca gtttacggtt gaaccacttc ccaccccaac aatagtgtcc
     5461 ggttttacaa attttaatgc agcttgtgcc gcaatttttt tcatttcttg ttgatccatt
     5521 tttacctcca cttgtagggc aaatcatcat ttgcccactt cggcaaggcg aaaaaaattt
     5581 tcgccctact acatctattc tacacatata tgtaacaagc ggtcatattt ggcaaatttt
     5641 ttaccaaaaa cgaccgcttg tcattagtta cgttttactg cttcaacaat ctcttccgca
     5701 cagctttgag caagtacagc atcttcgcac tccaccatca ctcgaattaa tggctcagtg
     5761 cctgatttac gcaataaaat acgccctttg cctgccaagc gtttttccac atctgccgct
     5821 accgctttca cttcgttact ttcaagcgga tttgccgccc ctttctcaaa gcgaacattt
     5881 agcagaactt gcgggaacag aggcactgct tttgccaaat cattcaggct taatttgtgg
     5941 cttgccattg ctgctaatac ttgcagtgag gcaataatac catcaccggt ggtgttttta
     6001 tctaacacga taatatgccc ggagttttcg ccacccagtt tccagccttt ttctttaagc
     6061 tgctctagta catagcggtc acccacgtta gcacgagaga atggaatggc tagctctttt
     6121 aaagctaatt ccaagctcat attactcatt aatgtaccga ctacaccgcc ttgtaatttg
     6181 cctgaacgta gagcttctcg ggctaaaata aatagaattt ggtcgccatc aactttattg
     6241 cctaagtgat cgaccataat caaacggtcg ccatcaccat cgtaagctag accaacatcc
     6301 gcacctgctt ctaccaccac tttttgaagt gctttaatat ccgttgcacc acatttttcg
     6361 ttgatgttta aaccgtccgg cttagtaccg atttcaagca cttctgcccc tagctcacgc
     6421 attacattcg gcgcgatatg gtaggttgca ccgttggcac aatccaccac aattttatag
     6481 ccttcaaggc ttagttcaga cgggaaagtg cctttacaaa actcgatata acgtcctgcg
     6541 gcatcattaa tacgactggc acgacctaaa tttgctgaat ctacgcaatc cataggctta
     6601 tcaagcattg cttcaatcgc ttcttcaatt tcatcaggta gtttttcacc aaccgacgag
     6661 aagaatttaa tgccgttatc gtaataagga ttgtgagagg cagaaatcac aatgccggct
     6721 tccgcacgga aagtacgggt taaataagca attgccggag tcggcatcgg accaacgaat
     6781 actgctgata aaccggctgc ggttaaaccg gcttccagag ccgattccaa catataaccg
     6841 gaaatacggg tatctttacc gattaatact tttttcgtgc cttgggttgc caacacttta
     6901 cctgctgccc aaccgagttt taatgcaaat tcaggtgtaa ttggaaattt acctacttca
     6961 ccacgcacac cgtctgtgcc gaaatattta cgagccattc taattcctaa gattgataaa
     7021 aatttacttt aaaaaatatt gatatgccgg actttcgctc acattttgga agcggtaacc
     7081 tagctgttct aaatgtcggt ttaattctac ttcatcgcct ctgtttaatg caaatgcggc
     7141 aagaatatcg ccataatcgg ctccgtgagc tcggtaatgg aataacgaga tatcccagtt
     7201 agtcagcatt tgtaagaatt ttagcaatgc ccctttctgc tctggaaatt caaagctata
     7261 gagttgctca tattgaatgg agcttgctct accgcctacc atataacgaa tatgggtttt
     7321 ggcaatatca tcgtccgata aatctgccac atcatagccg ttttgttgca gatctttaat
     7381 aatctctact ttttctgccg agcctgaaat tcgcaccccc acaaaaatac aggcttgttt
     7441 atcatcggaa tggcgatagt taaattccgt taccgcacgg ttgcctaaaa tctcgcagaa
     7501 ttttaagaaa ctacctttct gttcagcaat ggtgactgcc aataaagctt cacgtttctc
     7561 cccgatttca caacgctctg acacaaaacg taaggtgtgg aaattcacat tcgccccgga
     7621 aagaatgcaa gctaagtttt tatcttgtaa ttgatgctct ttcacatatt ttttcaaacc
     7681 ggcaagggaa gttgccccgg acggctcgga aatcgcacgc acattttcaa aaatcaactt
     7741 cattgaggca cagatttcat cattatccac caacaccaca tcatcaacat attgctgaca
     7801 caggcggaaa gtttcatcgc caatgcgttt taccgcaata ccgtcagcaa aaagcccaac
     7861 ccgttctaaa tcggtcggtt gcccttgctt taaggcgtga tataagcaag cagaatcttt
     7921 agattcgacc ccaatcactt taatattcgg catcacctgc ttaattaaaa ccgcaatgcc
     7981 ggcaattaag ccgccaccgc ccactggaat aaatacataa tctaaatccg gcttttgttg
     8041 caccagttct aagccgattg tgccttgccc tgcaatcact gccgggctgt caaacgggtg
     8101 aatgaaggtc atacccaatt cggtggaaag ctcaatcgct ttcgccttag cttcatcaaa
     8161 attcgcccca taaagcaaca cttcaccacc atagccacgt accgcatcaa ccttaattgc
     8221 cggtgtgttt tgcggcatta caatcaaggc tcttaaacct aaatgtttgg cagaaagtgc
     8281 caccccttgt gcgtggttgc ctgctgaagc cgcaatgact ccagcctctt tttgtgcttt
     8341 ggataaattt gagatcatcg caaaagcacc tcgcaattta aagctgtgaa ccggctgtcg
     8401 gtcttcacgt ttgataaaaa tagagttgcc taaccgctca gacagttttt ccattttctg
     8461 taaaggggtc acttgcgcta agtcataaat atttgagctt aaaatcgagc gtaaatagtc
     8521 gatagcggat tgggaatgtt gtgtttcgtt catcattttg aaaggttatt tattgttaga
     8581 ttgagataaa gacattggta aatttccaag gaaaattgac cgcttgtttg gttatttagc
     8641 aatggcttta acagggaata tttcctctcg cccgtttgcg ggagagagac agcttaaaat
     8701 ttcgttcaga aattttaagc agagagaggg gaaaccttgg atatccccct ctccctccgc
     8761 aaatcttcga tttgctccac cctctcccgc aagcggggag aggggaaatc acaaagttag
     8821 tgatgaccac cgcaaccaca gccaccgtgt ccgtgatgat ggtgatgatc gtggtcgtga
     8881 ccgccgcagc aaccatcgtg atcgtgatga tgatcgtgcc caccacaacc gcaaccgtgt
     8941 tcgtgtccgc cgtgaacgtg tccgtgtgcg atttcttccg ctgtcgcttc acgaatgcca
     9001 accacttcca cagagaaaag taattcctga ccggctaaca tatggttacc gtccaccaca
     9061 acttcatcgc catctacttc ggtaattacc accggtagcg gacctaaatc cgtgtccgca
     9121 ataaaacgca tacccacttc taattcatcg acgcccataa atacatcttt cggtacacgt
     9181 tgaaccatat tatcgttgta ctcgccgtaa ccttcttccg gtttcacacg cacttcaaac
     9241 acatcgccta cagctttgcc ttcaagggct ttttctaagc cttctaccaa gttgttgtga
     9301 ccgtgtaaat attctaacgg ttggtttacc ggtgcttcat ctactaatac gccttcttga
     9361 gtacgcactt gatatgcaat gcttggcact aaatcttttg taatgttcat attgaatcct
     9421 ttaattcatc ggttttataa aatagcaagc cattgtaacg ctttatttta tatttgcaat
     9481 ctatctggaa attttaaccg cttgtcagta aattagtcga taatatcagg ggttacggtg
     9541 tctaccacat caactgcggt tcccaccact ccaccaacca ccgaagttac caaacaacca
     9601 cttaggaaaa tagttgctga aatcagccca catactttga ttaatttttt cattttaaaa
     9661 tcctttcaaa aacaaaaaac agccctaatc aagactagag ctgcatcata tttattcgct
     9721 taaattattt ttcttcagcg ataaagcgat aaactaccgc accgataatt gcaccgacaa
     9781 tcggagcaac ccagaacaac cataattgct caatcgccca gctgccttgg aataacgcta
     9841 caccggttga acgtgccggg tttactgagg tattggttac cggaatgctg attaagtgga
     9901 ttaaggttaa agccaaacca atagcaatcg gagcgaaacc tgctggagca cgtttatcgg
     9961 ttgcacccat aatgatgatt aagaagaatg ccgttaatac cacttcaatt aataatgctg
    10021 ctgttaagct atagccgtgt ggcgaatgct caccataacc gttgccggca aagcctgctg
    10081 tagcatcaaa agtcggaaca cctgaagcaa tggtgtataa cactgcaccg gcagcaatcg
    10141 caccgattac ttgggcaatg atataaggca ctaaatcttt agcgttaaaa cgaccgccga
    10201 ctaataaacc gattgaaacc gccgggttga agtgaccacc tgaaatatga ccgactgcat
    10261 acgccattgt taatacggtt aaaccgaagg ctaacgaaac gcctgcataa ccgattccta
    10321 attcaggaat gcctgctgct aaaactgcac tgccgcaacc accaaacact aaccaaaatg
    10381 tcccgaaaaa ctcagcaaaa tattttttca ttttttatcc ttaccctaaa gggtgaatca
    10441 cacataagtg tattaacttt cc
//
LOCUS       DANMCL010000095        10135 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.096, whole genome shotgun sequence.
ACCESSION   DANMCL010000095 DANMCL010000000
VERSION     DANMCL010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 10135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10135
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.096"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            327..2219
                     /gene="mnmG"
                     /locus_tag="PXF40_002263"
     CDS             327..2219
                     /gene="mnmG"
                     /locus_tag="PXF40_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HDL5803559.1"
                     /translation="MIYNQIYDVIVVGGGHAGTEAALAPARMGLKTLILTHNVDTLGQ
                     MSCNPAIGGIGKGHLVKEIDAMGGLMAKATDVAGIQFRTLNNSKGPAVRATRAQADRV
                     LYRNAVRTALENQPNLDIFQQEVVDILVENNRAVGAVTKMGLTFKARAVVLTAGTFLA
                     GKIHIGLDNYAGGRAGDPAATMLADRLRDLNLRVDRLKTGTPPRLDARTINFDVLAKQ
                     HGDEVLPVFSFMGDVSQHPRQIPCYITHTNDQTHDLIRNSLDRSPMYTGIIEGVGPRY
                     CPSIEDKVMRFADRNSHQIYLEPEGLNTIEVYPNGISTSLPFDVQMGIVNSMKGLENT
                     RIIKPGYAIEYDYFDPRDLKPTLETKAIDGLFFAGQINGTTGYEEAGAQGLLAGINAA
                     LQVQGKEAWYPTRDQAYTGVLVDDLCTLGTKEPYRVFTSRAEYRLLLREDNADIRLTP
                     KAHELGLIDEARWVRFNQKMEAIEQERARLKSTWAHLQMPNLDELNALLANPLAREAS
                     GEDLIRRPEMSYEKLTQIALFAPAIEDKQVAEQVEIAIKYQGYIEHQYNEIERHKRHE
                     NTLIPVEFDYDKVESLSNEVRAKLMQHRPVSIGQASRISGITPAAISILLVNLKKQGM
                     LKRGEL"
     gene            2314..2538
                     /locus_tag="PXF40_002264"
     CDS             2314..2538
                     /locus_tag="PXF40_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803560.1"
                     /translation="MIYLRKLGFSPFDHQMFAQPSWYFCNALVHTNYENLRQGVFVTK
                     AYLVMFLENLLFEKSHSLSNRALRINENND"
     gene            2551..3165
                     /gene="rsmG"
                     /locus_tag="PXF40_002265"
     CDS             2551..3165
                     /gene="rsmG"
                     /locus_tag="PXF40_002265"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HDL5803561.1"
                     /translation="MLAKLNRLLAQAEINLTDQQKEQLVGFVRLLDKWNKAYNLTSVR
                     NPDEMLVKHILDSLVVSRHLQGETFIDVGTGPGLPGIPLAIANPDKQFVLLDSLGKRI
                     TFIKNALRELGIKNVTPVQSRVEEYTESQFDGVLSRAFASLNDMIDWCYHLPTENGKF
                     YALKGVYDEQEIIEIKQPIQLVEVIKLEVPELVGERHLVVLKKP"
     gene            3433..4881
                     /locus_tag="PXF40_002266"
     CDS             3433..4881
                     /locus_tag="PXF40_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5803562.1"
                     /translation="MNRVTNKADEFAKLSTFERIAYGSGDLAQNLVFGTVGGFLLTYL
                     TTVNGISAVAGATIFLIVKWGNVFWDPFVGAFIDKSKPSAQGKYRPYLLKFGIPLVVL
                     ASLLFLPLESVRGSVIYAFLSYFATAMVYSFVNIPYGSLSASLTRDTDEIAKLTTTRM
                     TMANIANLFVYTLFPLFVQLLAPHAELKNTGFFGIELYLGDYMSAAAGPAWFKVYAVY
                     MVIGFVALMLSYFGTKERIIPTAEETDKVKYSDLVNELKRNRPLQILGLFFLIGFTFM
                     FFGNTVWPFYLKYNIGHSEWIASVGLLGSIPGIFLVFLWPKLRRTIGKKNFFYLFLGI
                     FVLGQLCLWVWQFDSFKYSPTLGYIGRFLQQWGLTSATGFMWALVPEVVTFGEFKSKK
                     RVAGIINALMGLFFKIGLALGGIIPGYINAVYGFNGSLLAQTEEALFGINLSMIWAPI
                     ILAIIAGFVMSRYPLSDTDIDHINEKITAYSK"
     gene            4904..5950
                     /locus_tag="PXF40_002267"
     CDS             4904..5950
                     /locus_tag="PXF40_002267"
                     /inference="COORDINATES: protein motif:HMM:NF016497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HDL5803563.1"
                     /translation="MQIQNPVLPGFNPDPSIVRVGDTYYIATSTFEWFPGVRIHESKD
                     LVHWNLVKNVLDTTTLLDMRGNPSSGGIWAPDLSYAEGKFWLVYTDVKITDGAFKDMT
                     NYLTTAKEIQGPWSAPIKLNGIGFDASLFHDDDGRKYLVQQTWDHREYHHPFDGITLT
                     EFDVATMKLKPETQRTIFEGTEVKLVEGPHIYKINGEYYLFAAEGGTVFTHQEVVARS
                     KTLEAHSFQLAPNTPFITNFDTPNSYLQKQGHGSLVDTPSGEWYYASLTARPWNHATE
                     SATDPRGWSTLGREAAIQKVEFDQDGWPYIVGGHGGKTFVEAPKDAIFTEAPIDHSQH
                     DEFDSSTLDINWNT"
     gene            5953..6591
                     /locus_tag="PXF40_002268"
     CDS             5953..6591
                     /locus_tag="PXF40_002268"
                     /inference="COORDINATES: protein motif:HMM:NF036826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1,4-xylosidase"
                     /protein_id="HDL5803564.1"
                     /translation="MPFSKEMGEVGNGVLKLIGRGSLANTHDLSLIARRWQAFYFDAE
                     TKVKFTPFSYQSMAGLTNYYNHSHWSWIFITKNDQGQQVIEVAENKGGLRNGQYTSYL
                     KDKAIVIPDGTEYVWFKTKVRKETYRYEYSFDGKQWHTIPVELDAAVLSDDYVLRSYG
                     GFFTGAFVGLAAVDYSSYESTAEFSYFDYKELGDKQLTDGSFSWEKSESCFG"
     gene            6610..7590
                     /locus_tag="PXF40_002269"
     CDS             6610..7590
                     /locus_tag="PXF40_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL5803565.1"
                     /translation="MKQRRFGKTNKMVSEIGLGTWQLGTKWGEPFNHQEAMAILETAY
                     EQGINFIDTADVYNNGQSEKAIGDILKKYPDFFYVVTKCGRALNPHTAEMYTPQAIEK
                     FVDGSLSHLGTEKLDMILLHCPPTLVYRNDEIFTKLEQLKAGGKLIDYGVSIETAEEG
                     LLAMEYDIAAMEVIFNMFRLKPLEQLFPTAQQKNVGIIARVLLASGLLTGRYNACTQF
                     GKDDHRTFNRNGEAFDKGETFSGVDYQLGLQAVEELKALFGTEDLIPYALRWVLMNEA
                     VSTVIPGASKVSQVITNAAVDNFPPLTENEMQKVEDIYNRLIRPSVHHLW"
     gene            complement(7652..8653)
                     /locus_tag="PXF40_002270"
                     /pseudo
     CDS             complement(7652..8653)
                     /locus_tag="PXF40_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251403.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            8594..9604
                     /locus_tag="PXF40_002271"
                     /pseudo
     CDS             8594..9604
                     /locus_tag="PXF40_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540167.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
     gene            complement(9691..9990)
                     /locus_tag="PXF40_002272"
     CDS             complement(9691..9990)
                     /locus_tag="PXF40_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803566.1"
                     /translation="MENIKMEELKLTEKELLVLKGNALRMRFKAETNKTKNEIMQPFK
                     QVKQTGLALVNSPAVKTIALDFLVKRLLSMKGISFSVLGLTAFFLLQQKHKRDDS"
     gene            complement(9977..>10135)
                     /locus_tag="PXF40_002273"
     CDS             complement(9977..>10135)
                     /locus_tag="PXF40_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HDL5803567.1"
                     /translation="AIIMFIAVTICGMMILSALKKQRHFMQSTLTELKLDIAAFKSAL
                     TLKQNGEH"
BASE COUNT         2985 a         2033 c         2176 g         2941 t
ORIGIN      
        1 ttgggtattc attgctttaa aaagccttta ttctatagat tgtggataac ttaagatttt
       61 atccacaggt taatttattg gttaattgat agtattcacc tatttaaatt atactaactt
      121 attgttttta aatgaaaaga tcttttgttc acagaaaaat taggatctaa taagagtaag
      181 aataaagatc tttatataga tctatattat atttagtgtc gcatttagat cttaacctct
      241 ctaaaaatct atttcccaga tgatcccttt ttacgctaaa atatgcgttc atttttcagc
      301 agaatttgta agatagtaga agagatatga tttacaacca aatttacgat gtgatcgtgg
      361 tcggcggtgg tcacgccggc acagaagcgg ccctagcacc ggcacgaatg ggcttaaaaa
      421 ccctgatttt aacccacaat gttgatacct tagggcaaat gtcgtgcaac ccggctatcg
      481 gagggatcgg caaaggccat ctggttaaag agatcgatgc gatgggcggt ttaatggcaa
      541 aagcaacaga cgttgccggg atccaattcc gtaccctaaa caactcaaaa gggcctgcgg
      601 tgcgtgccac ccgtgcccaa gctgaccgtg tgctttaccg taatgcggta cgcactgcgt
      661 tagaaaatca accaaattta gatattttcc agcaagaagt agtggatatt ttggtggaaa
      721 acaaccgtgc agtgggtgca gttaccaaaa tgggcttaac gtttaaagcc cgtgcggtag
      781 ttttaaccgc tggtacgttc ttagcgggta agatccacat tgggttggat aactatgcag
      841 gtggtcgtgc cggcgatcct gctgcaacaa tgttggcaga tcgtctgcgt gatctgaatt
      901 tgcgtgttga tcgccttaaa acaggtacac cacctcgcct cgatgcccgt accatcaact
      961 ttgacgtact tgccaaacag cacggcgatg aggtgttacc tgtcttctct tttatgggcg
     1021 atgtctcaca gcacccacgc caaattccgt gctacatcac ccacactaac gatcaaaccc
     1081 acgatttaat tcgcaacagt cttgatcgca gcccgatgta caccggtatt atcgaagggg
     1141 ttggtccacg ttactgcccg tctattgaag ataaagtaat gcgttttgcc gatcgtaata
     1201 gccaccagat ctaccttgaa ccggaaggct taaatacgat tgaggtttac ccgaacggga
     1261 tctccaccag cttgccgttt gatgtgcaaa tggggatcgt caactcaatg aaaggcttgg
     1321 aaaacacccg catcatcaaa ccgggctatg cgattgagta cgactacttc gacccgcgtg
     1381 atttaaaacc aacccttgaa accaaagcga ttgacggttt attctttgcc ggacaaatta
     1441 acggcacgac cggttacgaa gaggcaggtg cgcaaggttt gctggcaggg attaacgcag
     1501 cgttacaggt tcaaggtaaa gaggcgtggt atccaacccg tgatcaagcc tacaccggcg
     1561 tgttggtgga cgacctctgt acattaggca ccaaagagcc ataccgtgtg tttacctctc
     1621 gtgccgaata ccgtctgttg ctgcgtgaag acaatgcgga cattcgttta acaccaaaag
     1681 cccacgaact aggattaatt gacgaggcac gttgggtgcg tttcaaccaa aaaatggaag
     1741 cgattgagca agaaagagct cgtttgaaat ccacttgggc acatttgcaa atgccaaatc
     1801 tggacgaatt gaacgcgtta ttggctaatc ctttagcccg tgaagcaagc ggtgaagact
     1861 taatccgccg tcctgaaatg agttacgaaa agctgaccca aatcgcccta tttgcccctg
     1921 ctattgaaga caagcaagtg gcagaacagg tggaaattgc gatcaaatat cagggctata
     1981 ttgagcatca atacaacgaa atcgaacgcc ataaacgcca cgaaaacacc ctgattccgg
     2041 tagagtttga ctacgacaaa gtcgaaagcc tctccaacga agtgcgagct aaattgatgc
     2101 aacaccgccc tgtctctatc gggcaggcaa gccgcatttc cggcatcaca ccggcagcga
     2161 tttccattct gttggtgaat ttgaagaagc aaggaatgtt gaaacggggt gagctgtaaa
     2221 tactacaagc ggttggtttt gcagaaattt ttgcaaaatt gaccgcttgt attctttgga
     2281 gaaggaaata cccgaactac cgccgtattt ttaatgatat atctgcgtaa actcggtttt
     2341 tcgccgttcg atcaccaaat gtttgcccaa ccttcgtggt atttctgcaa tgcacttgtt
     2401 cataccaatt atgaaaatct gcgacaaggt gtatttgtga ctaaagcgta tttagtgatg
     2461 tttcttgaaa atttattgtt tgaaaaaagt cattcgttaa gtaatcgggc attgcgtatt
     2521 aatgaaaata atgattaagg aatttgcaaa atgttagcta aattaaaccg cttgcttgct
     2581 caagccgaaa taaatttgac cgatcaacaa aaagagcagt tagttggttt tgtgagatta
     2641 ttggataaat ggaataaggc gtataacctc acttccgttc gcaaccctga tgaaatgttg
     2701 gttaaacata ttttggacag ccttgttgtt agtcgtcatt tacaaggcga aacgtttatt
     2761 gatgtcggca cggggccggg gctaccgggc attccgctgg cgattgctaa ccctgataaa
     2821 cagttcgtgc tactagacag cttaggcaaa cgcatcactt ttatcaaaaa tgcgttgcgt
     2881 gagcttggta ttaaaaacgt taccccagtg caaagtcgag tggaggaata cactgaaagc
     2941 cagtttgacg gcgtattaag ccgagccttt gcctcgctta atgatatgat cgactggtgt
     3001 tatcatttac cgactgaaaa cggtaaattt tatgcattaa aaggcgtgta tgatgagcag
     3061 gaaataattg aaatcaaaca accgattcag ctagtggaag tgattaagct tgaagtacct
     3121 gagttggtag gagaacggca tttagtagtg ttgaaaaagc cctaatacat tggaagttta
     3181 atgatacaag cggtcgaatt tgtaaatttt tttgcaaatc tgcctgcttg tgttaactat
     3241 ttttcataaa gcatacctgg ttaataaggt gtgctttttt tataacctat tatttcatct
     3301 gatttatttc tattttgtga tgtgcttcac aaaaacaaaa aaacataatg tagtaaaaaa
     3361 tattcgtaat tgaagccctt atttctttac ctgaaaataa gcgaacttaa ttatataacg
     3421 aggaggttcg taatgaacag ggtaacaaat aaggcagatg agtttgctaa actcagtacg
     3481 tttgaacgta ttgcttatgg tagtggcgac ttagcccaaa atttagtttt tggtacagtt
     3541 ggtggtttct tactcactta cttaactact gtaaacggca tttctgccgt agcaggagca
     3601 acgattttct taattgtaaa atggggaaat gtgttttggg atccgtttgt cggtgccttt
     3661 attgacaaaa gcaagccctc agcacagggt aaataccgcc cgtatttact gaaatttggg
     3721 attcctcttg tggttttagc ttcactacta tttcttcctc ttgaatcagt acgtggctca
     3781 gtgatttatg ctttcctttc ttattttgcc actgcgatgg tttattcttt tgttaatatt
     3841 ccttatggct cgctttctgc ttctcttact cgagacacag acgaaattgc taaattaacc
     3901 acaacccgta tgacaatggc aaatatcgct aatttgtttg tttatacctt attcccactt
     3961 tttgtgcagt tacttgcacc acatgccgaa ttaaaaaaca ccggcttttt cggtattgag
     4021 ctctatttag gtgattatat gtctgctgct gcaggccctg cttggtttaa ggtttatgcg
     4081 gtctatatgg taattggatt tgtggcgtta atgctctctt attttggtac taaagagcgg
     4141 attattccaa cagcggaaga aacagataaa gtcaagtatt cagatttagt taatgaactc
     4201 aaacgcaatc gtccattaca gattttaggg ttattcttct taataggttt tacttttatg
     4261 ttcttcggaa atacggtgtg gcctttttac ctaaaatata atattgggca ttctgagtgg
     4321 attgcctccg tcggtttatt aggctctatc cctgggattt tccttgtatt cttatggccg
     4381 aaactacgtc gcactatcgg taaaaagaac tttttctatc tatttttagg gattttcgtt
     4441 ctagggcaac tttgtctatg ggtatggcaa tttgactcct tcaaatactc tccaacctta
     4501 ggctatatcg gtcgtttctt acaacaatgg ggattaactt ctgctaccgg ttttatgtgg
     4561 gcgttagtgc ctgaggttgt tacctttgga gagtttaagt cgaaaaaacg tgtagcaggt
     4621 attattaatg cgttaatggg cttgttcttt aaaatcggct tggcgttagg cggtattatt
     4681 ccgggttata ttaatgcggt ttatggtttt aacggctcgc ttttggctca aaccgaagag
     4741 gctttatttg gtatcaatct ttcaatgatt tgggctccaa ttattttagc gattattgca
     4801 ggatttgtga tgagtcgcta tccgttaagc gatactgata ttgatcatat caacgaaaaa
     4861 attactgctt attccaaata atttgagtat aggagaatag attatgcaaa ttcaaaatcc
     4921 agttttaccc ggtttcaatc cagatccatc tattgtgcgt gtgggtgata cttactacat
     4981 tgcaacttct acttttgaat ggtttccggg agtgagaatt cacgaatcga aagatttagt
     5041 gcattggaat ttagttaaaa atgtcttaga tacaaccacg ttgttagata tgcgaggcaa
     5101 tccctcttca ggtggtatct gggctcctga tctttcttat gcggaaggta aattttggtt
     5161 ggtttatacc gatgtaaaaa ttacagacgg tgcattcaaa gatatgacta actatctaac
     5221 tactgccaaa gaaattcaag gtccttggtc agctccgatt aaattgaatg gtattgggtt
     5281 tgatgcttcg ttgtttcacg atgatgatgg gcgaaaatat ttagtgcaac agacttggga
     5341 tcaccgtgaa tatcatcacc cctttgacgg tattacgtta acggaatttg atgttgccac
     5401 aatgaaactc aaacctgaaa cccagcgtac gatttttgaa ggtacagaag tgaaattggt
     5461 ggaaggtcca catatttata aaattaatgg cgaatattat ctgtttgcgg cggaaggcgg
     5521 cacagtattt acgcatcaag aagtagtggc tcgttctaaa acattggagg ctcactcttt
     5581 ccaactggct ccaaatacac cgtttattac taattttgat acacctaatt cttacctaca
     5641 aaaacaaggg cacggttcat tagttgatac cccaagtggt gaatggtatt acgcttccct
     5701 cacagcaaga ccttggaatc atgcaacaga atccgcaacc gatcctcgtg gttggtcaac
     5761 attagggcgt gaagccgcca ttcaaaaagt agaatttgat caagacggct ggccttatat
     5821 tgtgggtgga cacggtggaa aaacctttgt agaagcccca aaagatgcaa tttttaccga
     5881 agctcctatt gatcattctc aacacgatga gtttgatagc tcaacgttag atattaactg
     5941 gaacacttaa gagtgccttt tagtaaagag atgggcgaag ttggtaatgg tgttttaaaa
     6001 ttgattgggc gaggctctct tgcaaataca cacgatttat cgctaatcgc acgccgttgg
     6061 caagccttct attttgatgc ggaaaccaaa gtgaaattta caccgttttc ttatcaatct
     6121 atggcaggtt taactaacta ttacaatcac tcacactggt cttggatttt catcaccaaa
     6181 aatgatcaag gacaacaggt gattgaagtt gcagaaaata aaggtggact cagaaatggg
     6241 caatatactt cttaccttaa agataaagca attgtcattc ctgatggaac ggagtatgtt
     6301 tggtttaaga ctaaagttcg gaaagaaact taccgttatg aatattcatt cgatggcaaa
     6361 caatggcaca ctattccggt tgaattagat gcggcagtgc tttcagatga ttatgtgtta
     6421 cgcagttatg gcggtttctt cacaggagct tttgtcgggc tggctgcagt ggattactcc
     6481 agttatgaat ctacagcaga atttagctac tttgactata aagagttagg cgataagcaa
     6541 cttacagacg gctcattctc ttgggaaaaa tctgaaagtt gctttggcta aaatgaggag
     6601 aatatcacaa tgaaacaacg cagatttggt aaaaccaaca aaatggtgtc agaaattggg
     6661 ttaggcactt ggcagcttgg gacgaaatgg ggtgaaccgt tcaatcatca agaggcgatg
     6721 gcaattttag aaaccgctta tgagcaaggc atcaatttta ttgataccgc tgatgtgtat
     6781 aacaacgggc aaagcgagaa agccattggt gatattttga aaaaataccc tgactttttc
     6841 tatgtcgtta ccaaatgtgg acgtgcgtta aacccgcata ctgctgaaat gtacacgcca
     6901 caggcaatcg aaaaatttgt tgatggtagt ttaagccatc ttggcacgga aaagttggat
     6961 atgattttgc tccactgccc gccaacgttg gtttatcgca atgatgagat ttttacgaaa
     7021 ttggaacagc ttaaagccgg cggaaaatta atagactacg gtgtgagtat cgaaacggca
     7081 gaggaaggct tgttggcaat ggagtatgac attgcggcaa tggaagttat cttcaatatg
     7141 ttccgcttaa aaccattgga gcaactcttc ccaaccgctc agcaaaaaaa tgtgggtatt
     7201 atcgcccgtg tactgttggc aagtggtttg cttacaggca gatataatgc ctgcacccaa
     7261 tttggcaaag acgaccaccg cacatttaac cgcaatggtg aagccttcga taaaggcgaa
     7321 accttttcgg gtgtggatta tcaactcggt ttacaagcgg tggaagaatt gaaagcccta
     7381 ttcggcacgg aagatttaat tccttacgcc ctacgttggg tattgatgaa tgaagctgtg
     7441 agtacagtaa tcccgggagc aagtaaggtt tcacaagtaa ttactaacgc agcggtggat
     7501 aatttccctc cactcactga aaatgaaatg caaaaagtgg aagatattta caaccgctta
     7561 attcgcccaa gtgtgcatca tttgtggtaa tttatccaac gctataaaaa atggaactct
     7621 aacttgagtt ccatttttgt caattttagc cttaaacctc taactgttta gaggttttct
     7681 taaacagagt caatgcaata aacgcaaagg ctaagaaaca ggaaaggatc agggcataga
     7741 aaccaccgtc ccagccgaac atatcaacca gtttacccat cacataacct gcacttgcag
     7801 agcctaacaa gtagccgaat aaaccggtta aacctgttgc tgtaccggtg gcaacacgag
     7861 gcactaaatc cgctgcttgt aaaccgatca tcatcaccgg cccgtagatt aagaaaccaa
     7921 tcgccactaa gcagatgttg tcgattaacg ggttgccggc tgggtttttc cagtacacca
     7981 caatcgcaat taacacacca gcaaggaata acaacatcgg cggcgcacgg tgacctttga
     8041 atactttgtc gcttaaataa ccgcttgcaa gcataccgaa gataccggca tattcataca
     8101 agaagtacgc ccagctctgt ttatccacag agaaatgttt cacttctttt aagtaagtcg
     8161 gtgcccagtc gataatgccg tagcgaatga aatagacaaa cacgttggca atcgcaattg
     8221 cccacaggaa tttgttgttt aaaatatatt tgtagaaaat gtctttggaa gagagtgtgt
     8281 gggcagactc cactttttcc accactttct cgcctttgta ctcatcaatc ggcggtaagc
     8341 cttgagattc cggcgtatca cgcatcaaat agaacatcac aaacgccagt acaatcgcaa
     8401 tcaacgccgg cagatagaac agggattgcc acacgccaaa aatagataag cctaaaatcg
     8461 ccaacggccc gattaaaccg ccgcccaagt tgtgcgacac gttccaccag ctccaccaca
     8521 cgccacgttc agaggttgag aaccagttgg tcatcgtttt cgcccccggc ggatagccca
     8581 ttccaaaacg ccacaaggca aaattgatgg ggtgactttc tacgatgaac tcaatcaaca
     8641 agaacatact gttttcggca ctgcggtgat taacgcaacc ggcgtattta tgaatgatat
     8701 tttaagtatg gatcacggta gcacgaaaaa atttgtcgta ccaagccaag ggattcactt
     8761 agtattagat aaatcattct taccaagtaa tgatgcgtta atgattccaa aaacctctga
     8821 cggacgagtg ttatttgctg taccttggca cgaagtgtta gtcgtaggga caacagatac
     8881 tctgattgaa aatccttctt atgagccaat tccattggaa caagaggtga actttatttt
     8941 agagacagcc gcacaatatc tgacaaaaaa accaactcgt gatgatgtaa aagcagtctt
     9001 tgccggtcaa cgtccgcttg cggcaccgga aaaagaaggt caaagcacta aagaagtatc
     9061 tcgtagtcac aaagttctca ctgatgcaac cagcggtttg attacgatta caggtggtaa
     9121 atggacaact tatcgtcaaa tggcagaaga taccgtagaa gaagcgttaa aagtccactc
     9181 tgaactaggc aataaacctt gtgtgaccgt caacttaccg attcacggta atattccggc
     9241 agcacaagtg aatctacaag atcatctata tgtatatggc tcagatattc cacagttacg
     9301 cgccttaatg actgagaccc cggaatatgc acaaaaaatc catccgagac tagattatac
     9361 cgttgcagaa gtgatctggg cagttcgcca cgaaatggca caaacggttg aggatgtatt
     9421 agctcgccgt gttcgtttgc tcttcactga tgcgagagcg gcgattgata gtgcagcaaa
     9481 agtggctgct attatggcga aagaattagg taaagatgaa atgtggcaac aacagcaagt
     9541 tatccagttc cttgatgttg cgaagcacta tttattggta gattatcagc cacagccaat
     9601 ctaatacgct aaaagcaagc ggttaaaatc gataaaaata ttgcaattac gttatttgca
     9661 actttttaaa ccattttaac cgcttgtata ttagctatca tctcttttat gtttctgttg
     9721 taataaaaag aatgctgtta accccaatac agaaaagcta attcctttca tactcaataa
     9781 tctttttacc aaaaaatcta atgcaatggt tttaactgcc ggtgaattga ccagtgcaag
     9841 ccctgtttgt ttcacttgtt taaaaggctg cataatctca tttttggttt tattggtttc
     9901 cgctttaaat cgcattctaa gtgcattacc ttttagaact agaagttcct tttcggttaa
     9961 tttaagctct tccattttaa tgttctccat tctgtttcaa agttaaagca ctcttaaatg
    10021 cggcaatatc taattttagc tcggttaatg tactttgcat aaaatggcgt tgttttttca
    10081 aggcagaaag tatcatcatt ccgcaaatag tcacagcaat aaacataata atggc
//
LOCUS       DANMCL010000096         9976 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.097, whole genome shotgun sequence.
ACCESSION   DANMCL010000096 DANMCL010000000
VERSION     DANMCL010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9976)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9976)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9976
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.097"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            282..1988
                     /locus_tag="PXF40_002274"
     CDS             282..1988
                     /locus_tag="PXF40_002274"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HDL5803568.1"
                     /translation="MNTSSFNRTWAKVILSALMRYGVKHFCIAPGSRSTPLTLAAVQL
                     QQTQYAECHTHFDERGLGFYALGIAKATDSPVAIIVTSGTAVANLYPAVIEASLSHQK
                     LIILSADRPTELIGCGVNQAIHQQGIFANYPVASVNLPKANEAYHASWLVSTIEQACT
                     TQAQQGGVLHINVPFEEPLYEADINEILNTPWLRPIQGWLNNAQTKWIDQQAIQSEVS
                     MHENWDYWRTKRGVIVVGKLPPEQGTGLKTWAETMGWCLLSDVQSCIEASLPYADIWL
                     SNETVKQRLLQADIVIQFGTQIVSKRVNEFLKAFQGEYWVVEQSHDYHNPNAHHQTRF
                     IAKAHHFLRVHPPLRQKPWLLEPLALSQFCSTFIEQQVGGSLSEASLAHNIQDVLAIN
                     GNLFIGNSLFVRLVDALCKLPEGYPVYTNRGASGIDGLIATMAGIAKGSDRPTVGVVG
                     DISALHDLNSIALLTKINQPTILFVVNNSGGALFDMLPVDSKAKDQYYRLAHNFEFAQ
                     VATMFGLEYIRPFTWADLKTKLKHAYARKGVTIVEIKVNEHDGSNMYKSLLKQISQAE
                     IA"
     gene            2037..2876
                     /gene="menH"
                     /locus_tag="PXF40_002275"
     CDS             2037..2876
                     /gene="menH"
                     /locus_tag="PXF40_002275"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HDL5803569.1"
                     /translation="MLSYQWHAQQGTPVVFLHGLLGSQQDWQAVLQHLQNFPQIRPLT
                     IDLPFHGNSKHITCADFANLRQQLHATLESLIGSRPFYLVGYSLGGRAALDYVLNMEN
                     PNLQGVVLEGANIGLSTENDRQIRRQNDRHWANRFRQEPIEQVLEDWYKQPVFADLSD
                     TERECYIDSRKHNQGEQIAQMLEATSLAKQPDYTEKLKQTDKNIVFFIGEKDQKFRKM
                     ASSHQLPTQLIANAGHNAHRANAKNFVEKLGLLILHSDSDLRSQSVKHNGAALLHKSP
                     SGA"
     gene            complement(2925..3602)
                     /locus_tag="PXF40_002276"
                     /pseudo
     CDS             complement(2925..3602)
                     /locus_tag="PXF40_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251475.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            3688..4350
                     /locus_tag="PXF40_002277"
     CDS             3688..4350
                     /locus_tag="PXF40_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HDL5803570.1"
                     /translation="MRKTHSFQQVRKIKPTWMSVSGHIPFRNGVSIPYESTLERDFLM
                     YFTYLPSVDEVVSQPTTLPFVKNGITYTYTPDFFLSFTDGRKPMLIEVKPKAKWQKHW
                     KEWKEKWKAAIRFCQENGYVFHVYDEDRIRHLALFNLNYVQRYKRIQHEQEDIDAILA
                     QVKLMGNTTIDYLLSRFFAGSLYRMKGLQIIYHLLATKQLHCNWFLPLNEFTEVWGNN
                     DE"
     gene            4340..6268
                     /locus_tag="PXF40_002278"
     CDS             4340..6268
                     /locus_tag="PXF40_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HDL5803571.1"
                     /translation="MMSNSGFTEKRYHHRLDRGRIILQKGNIYLNREDGEQYELVDYM
                     DEPSQLLVRNLNTRTTKVVSIHQLENFKMNERTDLSVDVTAISNEYWEKAQQKYEAIK
                     PLLGMDQHRPYAVKARAEDVGVNPRTLYRWLQAYNSIGSIAGLVDQKRGWQQGNSRLT
                     PEQDKLIVQVINEFYLHKQRPTTEQTIREIRRRCKIEKVESPSKETIRMRILHISEEE
                     RLRKRGQREKARNKFKPKPNSFPDADYPLSVVQIDHTPVDLIIVDSKYRKPIGRPFLT
                     VAIDIYSRMIVGYYLSLDAPSVTSVAMCIARGILPKERLLLDLGLQGSEWNAFGYPVK
                     VHVDNGPDFQALDLSKSCSAHGIHLEFRPMGRPEYGGHIERVIGTFMKEVHSLAGTTF
                     SNIKERDSYDSEKEAIMTLDEFEKWLVHYIVNVYHKRVHSALGISPEQKWKIGIFGDE
                     NEVGCGYPQLPVDEQTLLLDFLPSITRTIQHNGVTIDGLRYYDVALNMYISDSDESGK
                     SKEFLFRRDPRNISKIWFYDPKLKRYFPIPFANQAMPEMSIWEYREVRSRIANKGDKY
                     INEQQVLDGLTEMREMVAESAQRTKKARRQAERQKMHKASKPIIETKVETKAVVPVVV
                     TSNLLALDDESLSFGEVD"
     gene            6268..7155
                     /locus_tag="PXF40_002279"
     CDS             6268..7155
                     /locus_tag="PXF40_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniB family NTP-binding protein"
                     /protein_id="HDL5803572.1"
                     /translation="MQYEHVHEKFRHLVTADNQERIAFLDEPRWLGYGVAKDIMDNLV
                     SLMNKPKRPRMLNLLIVGDSNNGKTTLIRRFFDLYGQAYIDSDSNAIYPILLAEAPPS
                     ANEKELYISLLERFYVPYKPTDTIAKLRYQTIHLFREFRVKMLVIDEFHSLLVGTPRL
                     QRQVMNAIKMLCNELQIPIVGVGTRDAIRVLHTDRQHASRFDVAELPIWKLDKEFQKL
                     LFQFQGILPLRESSNLQSPELATKIHTISGGNLGNVHRLLTACAVQAITSGTEKITLD
                     IIEKNSWVQPTNGYRKIIG"
     gene            7113..8219
                     /locus_tag="PXF40_002280"
     CDS             7113..8219
                     /locus_tag="PXF40_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TniQ family protein"
                     /protein_id="HDL5803573.1"
                     /translation="MGTTNKRLSQNNRIKKGVIHTPIYSNESISSWLIRASFDCGTDP
                     LTFTGFYWEKHRLWTLDLDRGLENIEPTIYDDVQALSGKIQLSEYSLFRRLYPINADE
                     TLAKGQVRWVIPRSARNRTHHIGQQYCPLCLDESPHLRNDWRLAWNFGCLKHNMMLAN
                     RCFCCGTLYQPHLLSAEKRHLNHCHQCGGKLEQGTMEMSLAEKLTLQGINQVLEKDSG
                     ICFGYKVSGKVWFDMLRYCINLLRRASDRPNHALAKFVVNLQIDVENICSPKTGLSFE
                     QLPLGERTNLLVNAYHILGMEADSIRSAIYLCGGTQKTFMFEKYPDFWQEFMALAPAG
                     PNRTRKRTKPQNESITAINRRWERLKRKLHLNNE"
     gene            8216..9640
                     /locus_tag="PXF40_002281"
     CDS             8216..9640
                     /locus_tag="PXF40_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803574.1"
                     /translation="MKINVIKPQEEPCSACGKISRIWRRYNGEGYCANCYAKWFPKKE
                     CSCCHQPKRIYLSSTVCWDCEKQTDCVRCGKAAGTFKIGKITRYGAVCNVCSRYFREE
                     RECFECGQLSRTMLRASESGHSELLCLKCFQKYRFATCKNCRRYRKVHDRDNQLCRKC
                     SEQRTSQCPKCKQDMPAGYGNICADCSRRTLLFNLIRMNVHLFRHKKVKRAYKKFIFW
                     YLAKCGVSVVLKKSDDHVLFFMRCDENWGNIPDYRELVTFFKPNGLRTHLTVLRWLLD
                     TNQVKVDESLKEEMAGLERIQSLFNKLSNSVPCIANYYTQLQHKYEAGKTSLKSVRLA
                     LQPAIDFISSESVSLLPTQVQLNSYLVAKTGQIAAITGFINHLNREYHCELEIDRSLI
                     QKMKEKQLKQQAKQRLAILYKQEKLSIKEQNELLSVVLLNLHNIWIKSPKKLSISEID
                     GIAYYVDNEKKYFIPKDIHIRLME"
     gene            9755..9961
                     /locus_tag="PXF40_002282"
     CDS             9755..9961
                     /locus_tag="PXF40_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA delta(2)-isopentenylpyrophosphate
                     transferase"
                     /protein_id="HDL5803575.1"
                     /translation="MTLKAQFREWLKKEQEHDEMIGFAHIPCILSKVDSKLAIVSGNA
                     YEKKYLRYWIKCFRFDRNISKYIK"
BASE COUNT         3101 a         2006 c         2133 g         2736 t
ORIGIN      
        1 catactattc tccaaaatac ttataagtct ataaaaaatt tacacttgtt ctaatataat
       61 gaataaaatt ataaactaaa acacaaattc gaaatacgtt tcttcgtaaa tgctcttaaa
      121 aaagagagag tttactaagt aaagtgttgc tcaatagata gaaattttca cgaagtttta
      181 caaaaacatt ccaattttct cctaaaaaac ttcccacaat aatttcactt tttgctacaa
      241 tcctaaccat ttatcgaatt tatcaatcag tagagaagaa tatgaatacc agttctttta
      301 atcgcacttg ggcaaaagtg attttaagtg cattaatgcg ttatggcgta aaacattttt
      361 gtattgctcc gggttctcgc tcaacaccgc tcacattagc ggcagtgcaa cttcaacaaa
      421 cgcaatatgc agagtgccac actcattttg atgagcgtgg tttaggtttt tatgcgttag
      481 ggattgctaa agcaaccgac agcccggttg ctattattgt cacttccggc acagcagtag
      541 cgaaccttta tcctgcggtg atagaggcaa gcctgagcca ccaaaaactg attattcttt
      601 ctgccgaccg cccaaccgaa ttaatcggct gtggggtaaa ccaagccatt catcagcaag
      661 gtatttttgc caattacccg gttgccagtg tcaatctacc gaaagcgaac gaggcttacc
      721 acgcaagctg gctggtttcg accattgagc aagcctgcac tacccaagca caacaaggcg
      781 gtgtgttgca tatcaatgtg ccttttgaag agccgcttta cgaagcagac attaatgaaa
      841 ttctaaatac accttggtta cgcccaatcc aaggctggtt gaataacgct caaaccaaat
      901 ggatagacca acaagcgatt caaagcgaag tctcaatgca cgaaaattgg gattactggc
      961 gaactaaacg aggggtgatt gtggtcggca aactgccgcc ggaacaaggc acaggtttaa
     1021 aaacttgggc ggaaaccatg ggttggtgct tgctaagtga tgtgcaatct tgcattgaag
     1081 ccagcctgcc gtatgccgat atttggctct ccaacgagac tgtcaaacag cgtttattgc
     1141 aagcggatat cgtgattcaa ttcggcacgc aaattgtcag caaacgggtg aatgaatttt
     1201 taaaagcatt ccaaggggaa tattgggtgg tggaacaatc gcacgattac cataatccaa
     1261 acgctcatca tcaaacccgt tttattgcca aagcacatca ctttttgcgg gtacacccac
     1321 cacttcgcca aaagccatgg ttgcttgagc cattggcatt atcgcaattc tgctccactt
     1381 tcatagagca acaagtgggt ggcagcttaa gtgaagcctc acttgcacac aacattcaag
     1441 atgttttagc aattaatggc aacttattta tcggcaatag cttatttgtt cgattggttg
     1501 atgctctgtg caaactgccg gaaggctacc ctgtttacac caaccgtggt gcaagcggta
     1561 ttgatggctt aatcgcaaca atggcaggca ttgcaaaagg tagcgaccgc ccgactgtcg
     1621 gtgtggtagg tgatatttcc gcattacacg atcttaactc aattgcattg ctcaccaaaa
     1681 ttaaccagcc gaccatttta tttgtggtga ataacagcgg tggtgcgttg tttgatatgt
     1741 tgcctgttga tagcaaagcg aaagatcaat attaccgcct tgctcacaac tttgaatttg
     1801 ctcaagtcgc cacaatgttc gggcttgaat atatccgccc gtttacttgg gcagatctaa
     1861 aaaccaaact caaacacgcc tatgctcgta aaggtgttac cattgtggaa atcaaagtaa
     1921 atgaacacga cggcagcaat atgtataaat cattgctaaa acaaatttca caggcggaaa
     1981 ttgcctaatc acaactgccc ctcgccaatc ctgcgagggg taaaaatgta tcgactatgc
     2041 tttcctatca atggcacgct caacaaggca cacccgtggt tttccttcac ggcttgctcg
     2101 gctcacaaca agactggcaa gctgttctcc aacatttgca aaattttccg caaattcgac
     2161 cgcttaccat tgaccttcct tttcacggaa atagtaagca cattacctgt gccgattttg
     2221 ccaacctgcg acaacaacta cacgccaccc ttgaaagcct aatcggctca cgacctttct
     2281 atttagtcgg ctactcactc ggtggacgag cggcactcga ttatgtgtta aatatggaga
     2341 atccgaatct gcagggcgtg gtgttagaag gggcgaatat cggcttaagc acagaaaacg
     2401 accgccagat tcgccggcaa aatgaccgcc attgggcaaa ccgtttccgt caagaaccca
     2461 tcgaacaagt gcttgaagat tggtacaaac agcctgtttt tgcggattta agcgatacgg
     2521 aaagagaatg ttatattgat agcagaaagc acaatcaagg agagcaaatt gctcaaatgc
     2581 tggaagccac cagcctcgcc aaacagcctg actacaccga aaaactcaag cagacggata
     2641 agaatattgt cttttttatc ggtgaaaagg atcagaaatt tcgcaaaatg gcatcaagcc
     2701 accaactacc aacacaactg attgctaatg cagggcataa cgctcatcgg gctaatgcta
     2761 aaaattttgt ggagaaattg gggttattga tactccactc cgacagcgac ctacggtcgc
     2821 aatcggttaa gcataacggt gcagctctgc tgcacaaaag ccccagtggg gcttaatcag
     2881 ccgtaggcta aatataacct agtacggctc agccgtgcta ggtgttaggg ctccccctgc
     2941 aaccgttgca ataagcgatc catcgcccga taaccaagtg cttccgctaa atgcagttgt
     3001 tgaatattcg cctcgccggc taaatcagca atagtccgag aaactttcaa aatacggtgg
     3061 taggctcgta ccgataaacc gagctttgtc aatgcagttt ctaaaaatag ggcatcttgt
     3121 gccgataatt ggcaatctcg ctcaatttct cgggtggtga gttgagaatt gattttacct
     3181 gctcgctcaa attgcatttt tctggctaaa aacactcgct tgcgaacctg ctcggtggtc
     3241 tctcctcgat tctccgtccc actttgcaat gctccttgtg gcaaaagtgg cacttctata
     3301 gagagatcga aacggtctaa gaaaggtccg gaaaggcggt ttaaataccg cattacctgt
     3361 tggggcgaag tgcggttatg cgtgccttga taatgccctg tcgggcttgg gttcatcgct
     3421 gcaattaatt gaaagcgtgc cggaaattgt actttagcgt tggctcggga aatcacaatt
     3481 tcgcctgcct ccaacggctg acgtaacgca tcaagcactt tacgttcaaa ttcaggcaat
     3541 tcatctaaga acagcacacc gttatgggca agtgaaattt cccccggttt ggggatcgag
     3601 ccactgtaaa aactagaaat aaatgtcata aaaactagaa atagctgtca gattatttag
     3661 aaaacaagaa ataggtgtca aattattatg agaaaaacac atagttttca acaggttaga
     3721 aaaattaaac ccacttggat gagtgtatcg gggcatattc catttagaaa cggagtcagt
     3781 attccctatg aatcgacttt agagcgtgat tttttgatgt atttcactta tctaccttca
     3841 gtagatgaag tcgtctctca accgactacc ctacctttcg tcaagaatgg gatcacttat
     3901 acctatacac cagatttctt cttgtcattt acagacggtc gaaagccgat gttaatcgag
     3961 gtcaaaccga aagcaaaatg gcagaagcac tggaaagaat ggaaagaaaa atggaaagct
     4021 gcaatacgtt tttgccaaga aaacggttat gtattccatg tgtatgatga agatcggatt
     4081 cgacatctag cgcttttcaa tctcaactat gttcagcgct ataagcgaat acaacatgaa
     4141 caagaagata tagatgctat tctagcccaa gtaaagctga tgggaaatac cactattgac
     4201 tatttactct ctcgattttt tgcaggttct ctatatcgca tgaaaggcct acaaatcatc
     4261 tatcacttac tggcaacgaa acaactacat tgcaattggt ttctaccact taatgaattt
     4321 accgaggtat gggggaataa tgatgagtaa ctctggattt acagaaaagc gctatcatca
     4381 ccgattagat cggggacgta ttattttgca aaaaggtaat atttacctaa atagagaaga
     4441 tggagaacag tatgaattgg ttgattatat ggatgaaccc tcccaactgc tcgtacgaaa
     4501 tctcaacact cgtacaacca aagtcgtcag tattcatcag cttgaaaatt tcaaaatgaa
     4561 cgagcgaacg gatctttctg tggatgtaac cgctattagt aatgaatatt gggagaaagc
     4621 ccaacaaaaa tatgaggcaa ttaaaccgtt attagggatg gatcaacatc ggccttacgc
     4681 agttaaggct cgtgcagaag atgttggggt gaaccctcgt acattatacc gttggttaca
     4741 agcctataat tccataggat ctatcgcagg tttagtcgat caaaaacgtg gatggcaaca
     4801 aggaaattcc cgtttaacgc cagagcaaga caagctgatc gtgcaggtaa tcaatgagtt
     4861 ttacctacat aaacaacgcc caactactga gcaaactatt agagaaattc gccgccgatg
     4921 caaaattgaa aaagtggaaa gcccaagcaa agaaaccatc cgtatgcgca ttttgcatat
     4981 ttcagaggaa gagcgattac ggaaacgcgg gcaacgagaa aaggcacgca acaaatttaa
     5041 gccgaagcca aatagctttc ctgatgcgga ttatccattg agtgtggtac aaattgacca
     5101 tacaccagtt gacctaatta ttgtggatag taagtatcgt aaaccgattg gccgaccgtt
     5161 tttgacggtt gcgatagata tatacagcag aatgattgtt ggttattacc tttcacttga
     5221 tgcgccttct gtaacttcgg tggcgatgtg tattgcacgt ggtattttgc cgaaagaacg
     5281 cctactgctt gatttaggtt tgcaaggctc agaatggaat gcttttggct acccagtgaa
     5341 agtgcatgtg gataatggcc cagattttca ggctttggat ttatctaaat cttgttctgc
     5401 acacggaatc catcttgaat ttagaccgat ggggcgacct gaatatggcg gacatattga
     5461 gcgtgttatc ggtacattta tgaaagaagt tcacagttta gcaggaacaa cattctccaa
     5521 catcaaagag cgtgactctt acgattcgga aaaagaggcc attatgactc tcgatgagtt
     5581 tgaaaaatgg ttggtacatt acattgtgaa tgtttaccac aaacgtgtgc attctgcttt
     5641 aggcatttct cctgaacaaa aatggaagat tggtattttt ggagatgaaa atgaagtggg
     5701 atgtggttat ccgcaacttc ctgttgatga acaaacacta ctacttgatt tcttgccaag
     5761 tatcactcgt accattcagc ataatggtgt aacaattgac ggacttcgtt attacgatgt
     5821 tgcgctaaat atgtatatca gtgattcaga tgaaagcggt aaatctaagg aatttctgtt
     5881 tcgccgagac ccgcgaaata tcagcaaaat ttggttttat gatccgaaat taaaacgtta
     5941 cttcccaatt ccatttgcaa atcaggcaat gcccgaaatg agcatttggg aatatagaga
     6001 ggttcgtagc cgaattgcga ataaaggtga taaatatatc aacgagcaac aagttttaga
     6061 cggtttaacc gagatgcgtg aaatggttgc tgaatcggct caacggacga aaaaagcacg
     6121 ccgtcaggct gaacgacaaa aaatgcacaa agcaagtaag ccaattattg aaacaaaagt
     6181 ggaaactaag gctgttgtac cagtcgtagt aacatcgaat ttgcttgctt tagatgatga
     6241 gagcttatct tttggtgagg tggactaatg caatacgaac atgttcatga aaaattccgc
     6301 catcttgtga cagcggacaa tcaggagagg attgcgttct tggacgagcc aagatggtta
     6361 ggttatggtg tcgccaaaga cattatggat aatttggttt ctttaatgaa taaaccaaaa
     6421 cgcccacgaa tgttgaattt gttgattgtc ggcgattcca ataatggaaa aaccacactg
     6481 atccgccgct tcttcgactt gtacggtcag gcgtatatcg acagtgattc taatgcgatt
     6541 taccctattc ttcttgccga agccccacca agtgcgaatg aaaaagaatt gtacatctca
     6601 ttattagagc ggttctacgt accatataag ccgacagata cgatagccaa acttcgttat
     6661 cagactatcc atttgttccg agaatttcgt gtcaaaatgt tggttattga cgagtttcat
     6721 tctctgttgg ttggtacacc acgcttacaa cgacaggtga tgaacgcaat taagatgctt
     6781 tgtaacgagc tacaaattcc aattgtcggt gttggtactc gtgatgcaat tcgggtatta
     6841 catacggatc gacaacatgc cagtcgtttt gatgttgcgg aattgccaat atggaaacta
     6901 gataaggaat ttcaaaaact cctatttcaa ttccaaggga ttttaccttt gagggagagt
     6961 tcaaatctgc aatctccaga acttgctacg aagatccaca ccatttcagg tgggaactta
     7021 gggaacgtgc atcgcttact aacagcttgt gcagttcaag ccattacaag tggcacggaa
     7081 aaaatcacct tagacatcat tgagaaaaat tcatgggtac aaccaacaaa cggctatcgc
     7141 aaaataatcg gataaaaaaa ggtgttattc atacccctat ttattcaaat gaaagtatta
     7201 gctcgtggtt aattcgtgca tcctttgatt gtggtacaga tccactgact tttacagggt
     7261 tttattggga aaaacatcgg ttgtggacat tagatttaga tcgtggcttg gaaaatattg
     7321 agccaactat ctatgatgat gtacaggcat tatcgggtaa aatccaactt tcagaatatt
     7381 ccttgtttcg caggctttac cctataaatg cagatgaaac cttagctaaa ggtcaagtaa
     7441 gatgggtgat tccacgttcg gcaaggaata gaacccatca cattggtcaa caatattgtc
     7501 ctttgtgctt ggatgagtcg ccacatttac gcaatgattg gcggttagcg tggaattttg
     7561 gttgtctcaa gcataatatg atgttggcga acagatgttt ttgttgtggt acattgtatc
     7621 aaccccattt actatcagcg gaaaagaggc atttgaatca ttgtcatcaa tgtggtggga
     7681 aactggaaca aggcacaatg gaaatgagtc tagctgaaaa gctgacattg caaggtatta
     7741 atcaggtact cgaaaaagat tcaggcatct gttttggata caaggtgtcg ggtaaggtgt
     7801 ggtttgatat gctccgctac tgcatcaact tattgagacg tgcatcagac agaccaaatc
     7861 atgccttagc aaaatttgta gttaatctac agattgatgt tgaaaatata tgtagcccca
     7921 aaacaggact ttcttttgaa caacttccgc taggtgaacg tacaaattta cttgtgaatg
     7981 cctatcatat tttgggaatg gaagcagatt ctattcgtag tgcaatttat ttgtgtggcg
     8041 gaacacaaaa aacctttatg tttgaaaaat atcctgattt ttggcaagaa tttatggcac
     8101 tagcacccgc aggcccaaat agaacacgaa aacgcaccaa gccccaaaat gagtctatca
     8161 cagcaattaa tcgccgttgg gagcgtttga aacgcaaact acacttaaat aacgaatgaa
     8221 aattaatgta ataaaaccac aggaagaacc ttgctccgct tgtggcaaaa tttctcgcat
     8281 ttggcgcaga tataatggcg aaggctactg tgccaattgc tatgctaagt ggtttccgaa
     8341 aaaagagtgc agctgttgcc atcaaccaaa gcgtatctat ttgagttcaa cagtatgttg
     8401 ggattgcgaa aaacagactg actgtgtacg ttgcggtaag gctgcgggta cattcaaaat
     8461 tggtaaaatt acccgttatg gtgcagtttg taatgtgtgt tcacgttatt ttcgtgaaga
     8521 acgagaatgt tttgagtgtg gtcaactatc tagaactatg cttcgagcat cagagtcagg
     8581 tcatagcgag ctactctgct tgaagtgttt tcaaaaatat cggtttgcga cttgtaaaaa
     8641 ctgtcgccgt tatcgcaaag ttcatgaccg tgataatcag ctttgtcgaa aatgtagtga
     8701 gcaacgaact tcacaatgcc cgaagtgcaa acaggatatg cctgcgggat atggtaatat
     8761 ttgtgcagat tgttctaggc gaactctact gttcaacctt attcgaatga atgtgcattt
     8821 attccgccac aaaaaagtga aaagagcata taaaaagttc attttttggt atctcgcaaa
     8881 gtgtggcgtg agtgttgtgc tgaaaaaatc agacgaccac gtcctctttt ttatgcgttg
     8941 cgatgaaaat tggggcaaca ttccagacta ccgtgagttg gttacattct ttaaacccaa
     9001 tggattacgg acgcatttga ctgtgttgcg ttggttgctt gataccaatc aagtcaaagt
     9061 agatgagagc ttaaaagagg aaatggcggg gttggaacgt attcaatccc tatttaacaa
     9121 attaagtaac tctgtacctt gtattgcaaa ctactacacg cagttacaac ataaatatga
     9181 ggcgggcaaa acatcactga aatctgttcg attagcttta caacctgcga ttgatttcat
     9241 cagttcagaa tctgtctcgt tactgccgac tcaagtacaa ctgaatagct atcttgtggc
     9301 aaaaacggga cagattgctg ctattacagg ctttataaac cacctgaacc gagaatatca
     9361 ttgtgaatta gaaattgacc gctccctcat tcaaaagatg aaagaaaagc agttgaagca
     9421 gcaagcaaaa cagcgattag cgatactcta caagcaagaa aaactaagta tcaaagagca
     9481 aaatgagcta ctctcagtcg tattactgaa tttgcacaac atttggataa aatcaccgaa
     9541 aaaattaagt atttcagaga tagacggtat agcctactat gttgataatg agaaaaaata
     9601 ctttatacca aaagacattc acatacgcct gatggaataa gctgtcgtca atttttattt
     9661 ttgcgatctg tgtcgagaaa ataatattta tgaatcgaca gatgaaataa tattgataaa
     9721 gtctctttgt gtgttcaaca aacaggagat aaatatgaca ttaaaggctc aatttcgtga
     9781 atggcttaaa aaagagcaag aacatgatga aatgataggg ttcgcccata tcccttgcat
     9841 tttatctaaa gtggatagca aactggcgat tgttagcgga aatgcttatg agaagaaata
     9901 tctcagatat tggatcaagt gttttaggtt cgatagaaat atcagcaagt atattaaata
     9961 ggttaaatat ctagct
//
LOCUS       DANMCL010000097         9857 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.098, whole genome shotgun sequence.
ACCESSION   DANMCL010000097 DANMCL010000000
VERSION     DANMCL010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9857
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.098"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            177..554
                     /locus_tag="PXF40_002283"
     CDS             177..554
                     /locus_tag="PXF40_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HDL5803576.1"
                     /translation="MEYQFTHSIHGVVAKCSMDHEAFARWLNAEITENPSQLAPIFAE
                     IEKCRAAFPNHYECVFEGREYSLYFDYDEVMAKANNLDAAFDDEEMEEGFQFYNEESI
                     AFCGLDDFEKFLKAYQHFVQTYH"
     gene            643..1230
                     /gene="yihI"
                     /locus_tag="PXF40_002284"
     CDS             643..1230
                     /gene="yihI"
                     /locus_tag="PXF40_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HDL5803577.1"
                     /translation="MSRTKKTRRITDIMPARKTDKPKQPMPKLGGGKNRKLTRYELDA
                     QAREEKRKRKHKGLPTGSRNADPAEQKKAVVKEVKDPRIGSRKKVPLMVEFVNQPEKG
                     RTIKAVPVEPIKPTLSPEQELEQLENNECLNQLLDDLEAGKTLSAEDQKFMNECLDRI
                     DELMTELGIEYEDEEGDNGDALLRQFETMDINKFR"
     gene            1244..1711
                     /locus_tag="PXF40_002285"
     CDS             1244..1711
                     /locus_tag="PXF40_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012263040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2489 domain-containing protein"
                     /protein_id="HDL5803578.1"
                     /translation="MLRIFLMVLAALILISLGGYALHLMLKVRAQKKHEQALIEQAKQ
                     AQKDRYIRILDSIEVIARAMISEQCDFSEGVLRLKPLLDVLGRKLSDYTAMWALYGVV
                     ENMPILDERKNLKRNERMKLDLEREAKEAELESDIKNECYQLLKDIEEMRKAI"
     gene            1711..3078
                     /gene="hemN"
                     /locus_tag="PXF40_002286"
     CDS             1711..3078
                     /gene="hemN"
                     /locus_tag="PXF40_002286"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HDL5803579.1"
                     /translation="MSEIIWDLALIQKYNHSGPRYTSYPTALEFNENYTNEDFIRAAA
                     RYPERPLSLYVHIPFCHKLCYFCGCNKVITRHRHKVEIYLDYLEREIKTRAPLFQNRL
                     VTQIHWGGGTPTYLDEDQSARLMQMLRANFDVSDDAEISIEMDPREIELSMLDHLRAI
                     GFNRLSMGIQDFDKEVQRLVNREQDEEFIFALMKRAKELGFVSTNVDLIYGLPKQNVE
                     SFMYTLKRVVELNPDRMSVFNYAHLPSRFAAQVKIKEELLPAPETKLTILQNSIEFLG
                     KNGYKFIGMDHFAKPDDELAIAQEKGILHRNFQGYTTQEECDLLGMGVSAISLLGDTY
                     AQNRKELQQYYADVETNGIALHKGIALTQDDCIRRDVIKALICNFKLDFATIEKQYGI
                     DFKRYFAEDLAFLAPLAEDELLTMNDDSIVVSPRGRLLIRNICLCFDVYSRQLARRQQ
                     FSRII"
     gene            3152..5485
                     /gene="lptD"
                     /locus_tag="PXF40_002287"
     CDS             3152..5485
                     /gene="lptD"
                     /locus_tag="PXF40_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HDL5803580.1"
                     /translation="MKQRYSLLSLAVMAACYSNSAAADLKQQCLLGVPHFQGEVVEGD
                     QLRMPVTIEADSAVINQPRDATYTGDVTIKQGNRSIWADQVRVEQDGENARMAYLQGN
                     FNYQDNLIQATGSDATINLLSKDANLANANYQLIGRQGRGTAESGEFGNSKHTLKNAS
                     FTSCLPNDNSWQIEANEMIQHVDEEYAEMWHARFKVLGMPVFYSPYLQFPIGDRRRSG
                     LLIPSFERSSKNGWTYSQPFYWNIAPNMDSTITPTYYSRRGWQISPEFRYLTKIGQGL
                     VATEYMAKDRLSEYQPGNDDRKRYLFHWRHAMSFLTDWRFSVDYTKVSDRRYFSDFDS
                     DYGSSTDGYATQNFKLGYYQPNYNISISGKKFQTFDELDIGPYRVLPQIDFNYYKNDL
                     IKGGDFKFFAQAARFENDSKLMPKAWRFHAEPTLNFPLANRYGSLNLETKLYATYYQQ
                     TKGSESTEEIKKSVSRVLPQIKLDFKTVLESDKQLFSGYTQTLEPRVQYIYRPYKDQS
                     DIGSKAHRSVSLGYDSALLQNDYFSLFNDRRYSGLDRISSANLVTAGGTTRFFKEATG
                     EEVFNFSLGQTYYISPSKIDDTSDNSTKGHTTSWAAESNWKFHKNWNWHGSYQYDTRL
                     NQTALANMSLQYKPQSDKLIQLNYRYASKDYINQNLNTNKYGQSIKQVGGVLGWELTD
                     KVSVMTSYYHDLALKKPVEGQISLNYNTCCWAANVYVARRLVSTPVGSSDTINDFYYD
                     NKFGINFELRFGTNYSNGVTRMLKRGIIPYTEPYSIN"
     gene            complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXF40_002288"
     CDS             complement(5627..8266)
                     /gene="ppc"
                     /locus_tag="PXF40_002288"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HDL5803581.1"
                     /translation="MNQQYSTIQHNIHMLGEFLGETIRDAQGNYILELIESIRVLSRN
                     SRAGDENAREQLLDKLANISNDDVLPVARAFSHFLNLTNIAEQHQTVSRHHIDESLGS
                     RSLDSLFLRLKSQNIPVEKVIKTVESLMIDLVLTAHPTEVTRRSLGHKHVEINKCLNL
                     LEHDDLTEAESYKIKRRLMQLIALAWHTNEIRTQRPTPVDEAKGGMAVIENSLWKAVP
                     EFCRQLNFYLEKHFGVQYPVNLAPVRFSSWMGGDRDGNPFVTAETTRRVLRMNRWKAT
                     ELFLQDIKNLAEELSITQCTPAFRAKYGNHLEPYRVLLKVLRQKLINTEIYYAELLEG
                     KISTIDESDILTSDQQLWEPLFDCYESLQACGMRIIANGALLDCLRRINCFGLGLSRL
                     DIRQESTRHEMAIAEITRYIGLGDYAHWTEDDKQAFLVRELSSRRPLIPTNWTPSPET
                     KEVLDTCKIVAEQPEGVISAYVISMAREASDVLSVHLLLKEAGCKFTIPVAPLFETLG
                     DLDHSEKVMTDLFNIGWYRGVINNYQMIMIGYSDSAKDAGMFAAGWAQYRAQEALVNL
                     CEKYNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPA
                     VAVESLELYASAILEANIFPPPEPKQQWRDVLAKASDISCQIYRDMVRGELDFVPYFR
                     SATPEQELSRLPLGSRPAKRNPKGGVESLRAIPWIFAWMQNRLMLPAWLGAGQALQQL
                     IDEGNETLLKEMCNEWPFFSTRIGMLEMVFSKADIWLAEYYDQRLVEPKLHRLGNMLR
                     TQLQADLKTVLALAHDGQLMADLPWIAESIALRNIYTDPLNLLQVELLDRIRKQGENA
                     DPVLEQALMITITGIAAGMRNTG"
     gene            8391..9359
                     /locus_tag="PXF40_002289"
     CDS             8391..9359
                     /locus_tag="PXF40_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS1 family transporter"
                     /protein_id="HDL5803582.1"
                     /translation="MCLKLLFGFDNLPVVYVLFTVIQVGLSINGFKGIKWLENVSCVF
                     LIGILAYMLYVVNTKFSVEIGERFANIEGTWGMPFWAATTAFLGIYSTMILNASDYSR
                     HVKKGTTPTATGVIYVLSILPVTLFMGLIGLLVTAATGNSDPIEVFATAMDNKFLTVI
                     TLLFIAFAQVTTNVLNNIVPPSYILMDSFKMKWSHATILVGILSICVMPWKLVTAESA
                     DGLSLFIKIYSAFLGPIFAVMVVDYYILRKRTLNVNDLYNKEGIFKGINWAAIIAIAI
                     GSFCSLIVVDLSWYVSLIPSGLSYYILMRVLKSSEAFRKGTVLEHQ"
     gene            complement(9624..>9857)
                     /locus_tag="PXF40_002290"
     CDS             complement(9624..>9857)
                     /locus_tag="PXF40_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803583.1"
                     /translation="QDDGSLNAKYVVGTGDDTDGEVTNFVIITSEYKYIDAQSAKAIT
                     DAPLTKEDIGKTPTQIMLGRIYKYLKETGQIVV"
BASE COUNT         2979 a         1868 c         2109 g         2901 t
ORIGIN      
        1 gtagttcctt tttgatgtat caatactaaa aataacctgt attattctag cagatttctg
       61 ggtaatcgag gagttgataa catttaaaaa ttagcgtttt gcaaaatttt ccaaaaaaag
      121 accgcttgtt aggctataat agccaaccaa acagaccaat tcaaaggaga atcggtatgg
      181 aatatcaatt tacccatagt attcacgggg tggtggcaaa atgttcgatg gatcacgagg
      241 cgtttgctcg ttggttgaat gccgaaataa cggaaaatcc tagccagtta gcccctattt
      301 tcgctgaaat agagaagtgt cgagccgcat ttccgaatca ttatgaatgt gtgtttgaag
      361 ggcgggagta tagtctctat tttgattatg atgaagtgat ggcaaaagca aacaatttag
      421 atgctgcttt tgatgatgag gaaatggaag aaggctttca attttacaat gaagagagca
      481 tcgcattttg tggcttagat gactttgaga aatttttgaa agcctaccaa cattttgtgc
      541 aaacttatca ttgattgaaa tgattaattg aaaccaaagc tattaaggga atctaattcc
      601 ttgtagaata gccgtttata gcaattttaa gatattaaat ttatgagtcg tactaaaaaa
      661 acacgtcgta ttaccgacat tatgccggca agaaagaccg ataaacctaa acagcccatg
      721 cctaaattag gtggggggaa aaatcgcaaa ctgacccgtt atgagttaga tgctcaagcc
      781 cgtgaggaaa aacgtaagcg taaacataaa ggcttgccga caggctcacg caatgctgat
      841 ccggcagagc agaaaaaagc agtggtgaaa gaggtgaaag atccgcgtat cggtagccgt
      901 aaaaaagtgc cgttaatggt ggaatttgtg aaccagccgg aaaaagggcg gacgattaag
      961 gctgtgccgg ttgagccaat caaaccaacg ctttcaccgg aacaagagct ggagcagtta
     1021 gaaaataacg aatgtttaaa tcagttgtta gatgatttgg aggcgggcaa aaccttatcc
     1081 gcagaagatc agaaatttat gaatgaatgt ttagatcgca ttgatgaatt aatgactgag
     1141 cttggcatcg aatatgaaga tgaagagggc gataatggcg atgcgttatt acgccaattt
     1201 gaaacgatgg atattaataa attccgctag gtagccgatt atgatgctaa gaatattcct
     1261 gatggtgctt gccgctttga ttttaatttc gctgggcggg tatgcactgc acttaatgct
     1321 gaaagtgcga gctcagaaaa agcacgaaca agcactgatt gaacaggcaa agcaagcaca
     1381 aaaagatcgt tatattcgga ttttagacag cattgaagtt attgctcggg caatgatttc
     1441 agaacagtgc gatttttcgg aaggcgtttt acgtttaaaa ccgctattag atgttctcgg
     1501 cagaaaatta agcgactata cggcgatgtg ggcgttgtat ggcgtggtag aaaatatgcc
     1561 gattttagat gaacgcaaaa atttaaaacg taacgaaaga atgaagttgg atttagagcg
     1621 ggaagcaaaa gaagcggagc ttgaatcaga catcaaaaat gagtgttacc aattattaaa
     1681 agatattgaa gaaatgagaa aggcaatcta atgtcagaaa ttatttggga tttagccctt
     1741 attcaaaaat ataaccattc agggcctcgt tatacctctt acccaacagc gttggagttt
     1801 aacgaaaatt acaccaatga agattttatt cgtgctgcag ctcgttaccc tgagcgtccg
     1861 ctttcgcttt atgtgcatat tccgttttgc cataaactgt gctatttctg tggctgtaat
     1921 aaagtgatta ctcgtcatcg ccataaagtt gaaatttatt tagattattt agagcgtgaa
     1981 attaaaactc gcgcacctct gtttcaaaat cgtttagtga cccaaataca ctggggtggc
     2041 ggtacgccga cttatttaga cgaagatcaa tcggcacgtt taatgcaaat gctacgagcc
     2101 aattttgatg tgagcgatga tgcggaaatc agcattgaaa tggatccgcg tgaaatcgaa
     2161 ttaagtatgt tggatcacct gcgtgctatc ggttttaacc gtctgagtat gggtattcag
     2221 gatttcgata aagaagtgca acgtttggtg aatcgtgagc aagatgaaga gtttattttt
     2281 gccttgatga aacgggcaaa agaacttggt tttgtttcaa ctaatgtgga tttgatttac
     2341 ggcttgccaa aacagaatgt ggaaagcttt atgtacacct taaaacgtgt ggtagagcta
     2401 aaccctgatc gtatgagcgt atttaactat gcccacttgc caagccgttt tgctgcacaa
     2461 gtgaaaatta aagaagagtt gttgccggct ccggaaacca aattgacgat tttgcaaaat
     2521 tccatcgaat ttttaggcaa aaacggttat aagtttatcg gtatggatca ctttgctaaa
     2581 cctgatgatg agttagctat tgcacaagaa aaaggcattt tacaccgtaa cttccaaggc
     2641 tataccactc aagaagagtg tgatttattg ggaatgggcg tatcggcaat cagcttactc
     2701 ggcgatactt acgcccaaaa ccgcaaagaa ttacaacaat actatgctga tgttgaaacc
     2761 aacggtattg cgttgcataa aggcattgcg ttaacccaag atgattgcat tcgccgtgat
     2821 gtgataaaag ccttgatttg taatttcaaa ttagattttg ccaccattga aaagcaatat
     2881 ggtattgatt ttaaacgtta ttttgccgaa gatttagctt tcttagcgcc gttggcggaa
     2941 gatgaattat taacgatgaa tgacgacagc attgtggttt ccccacgagg gcgtttattg
     3001 atccgtaata tttgcttatg ctttgatgtc tattcaagac aattagcgag aagacagcag
     3061 ttttcccgta ttatttaatg agcaagcggt cgattttggt aaaaattttg caaaaacaga
     3121 ccgcttgttc ccggcttata aaggaaaaat gatgaaacag cgttatagct tactttctct
     3181 tgctgtgatg gcagcttgtt atagcaacag tgccgcagct gatttaaagc aacaatgttt
     3241 acttggcgtg ccgcattttc agggcgaagt ggtagagggc gatcaactta gaatgcctgt
     3301 taccattgag gctgacagtg cggtcattaa ccagcctcgt gatgccacct acaccggtga
     3361 tgtaacgatc aaacaaggta accgttcgat ttgggcggat caggtgcggg ttgagcaaga
     3421 tggcgaaaat gcccgaatgg cgtatttgca gggtaatttt aactaccaag ataatttgat
     3481 tcaggcaacc ggttcagatg cgaccatcaa tctgctttcc aaagatgcga atttagctaa
     3541 tgctaattac caattaattg gcagacaagg gcgtggcacg gcagaatccg gtgaattcgg
     3601 caacagcaaa cacacgctga aaaatgccag tttcacttcg tgcttaccga atgataattc
     3661 gtggcaaatt gaagcgaatg aaatgattca gcacgttgat gaagaatatg cggaaatgtg
     3721 gcacgcccgt tttaaagtgc tgggaatgcc ggtattttat tcgccttact tacaatttcc
     3781 gattggcgac cgccgccgta gtgggttatt aattccaagt tttgagcgtt caagcaaaaa
     3841 cggctggaca tattcgcaac cgttttattg gaatatcgca ccgaatatgg actcgaccat
     3901 cactccaact tactattcac gccgtggttg gcaaatcagc ccggaatttc gttatttaac
     3961 gaaaatcggg caaggcttag tggcaaccga atatatggcg aaagatcgtt taagcgagta
     4021 ccaaccggga aatgatgatc gtaaacgcta tttattccac tggcgtcacg caatgagttt
     4081 tttaaccgat tggcgtttct cggtcgatta caccaaagtg agcgacagac gttatttctc
     4141 tgattttgat tcggattatg gtagcagtac tgatggctat gcgacgcaga attttaaatt
     4201 aggctactat cagccgaatt ataatatctc aatttcaggt aaaaaattcc aaaccttcga
     4261 tgagttggat atcgggcctt atcgcgttct gccacaaatt gattttaact attataaaaa
     4321 cgatctaatt aaaggcggag atttcaaatt ctttgcccaa gcagcccgtt ttgaaaatga
     4381 tagtaaatta atgccaaaag cgtggcgttt ccacgctgag ccaacactga atttcccatt
     4441 agcgaaccgc tatggtagct taaatttaga aaccaagctc tatgcaacct actatcaaca
     4501 aacgaaaggt agtgagagta cggaagaaat taagaaaagt gtaagtcgtg tactgccaca
     4561 gattaagctc gattttaaaa ccgtgttgga atccgataaa cagcttttct ctggctatac
     4621 tcaaacgctt gagcctcggg tgcaatatat ttatcgccca tataaggatc aaagcgatat
     4681 tggctcgaaa gcacatcgaa gtgtgagctt aggctatgac tctgcattat tgcaaaacga
     4741 ctatttctca ctgtttaatg acagacgtta tagcggttta gatcgtattt cgtcagcaaa
     4801 tttagtcacc gcaggtggca caacccgttt ctttaaagag gcaaccggtg aagaggtgtt
     4861 taatttcagc ttaggacaaa cttattatat aagcccgtct aaaattgatg atacctcaga
     4921 taacagcact aaaggtcata cgacttcatg ggcagcggaa tctaactgga aattccataa
     4981 gaattggaat tggcatggta gctatcaata tgatactcgt ttaaaccaaa cggcgttagc
     5041 gaatatgtca ttgcaataca aaccacagtc agacaaattg attcagctta attaccgcta
     5101 tgcaagtaaa gattacatca atcaaaactt gaacacgaat aagtatgggc aatccattaa
     5161 acaagtgggc ggtgtgctag gttgggaatt aaccgataaa gtgtcggtaa tgaccagtta
     5221 ttaccacgac cttgcattga aaaaaccggt ggaagggcaa atttcgctta actacaacac
     5281 ttgctgttgg gcggcaaatg tgtatgtggc tcgtcgctta gtttcaacgc cggtaggttc
     5341 atctgatacg atcaatgatt tctactatga caataaattc ggcattaact ttgagctacg
     5401 ctttggcaca aactacagca atggtgtaac ccgtatgcta aaacgaggta ttattcctta
     5461 caccgagccg tatagcatta attaacaaag taaaaacaaa taagtaaaaa tacaaatcgg
     5521 ggcgaaaaat atttgccccg atttttttat atttggctga taagcggtta aattctgttg
     5581 gaattttgca aatcttccgc taaattcaac cgcttgccat cgaaacttaa cctgtatttc
     5641 gcatacctgc ggcaatacct gtgatggtga tcatcaatgc ttgctctagt acaggatcag
     5701 cattttcacc ttgtttgcga atcctatcta acaattctac ctgaagtaga ttgagcggat
     5761 cggtataaat attgcgtagt gcaatcgatt ctgcgatcca aggtaaatcg gccattaatt
     5821 gtccatcgtg agccagtgca agtacggttt taagatcagc ctgtagttgc gtacgcaaca
     5881 tattgcctaa acggtgtagt tttggctcga ctaggcgttg gtcgtaatat tccgccagcc
     5941 aaatatcagc tttactaaat accatttcca gcattccgat acgggtcgag aaaaacggcc
     6001 attcgttaca catttctttt agtaaggttt cattaccttc atcaatcaac tgttgcaatg
     6061 cttgccctgc acctaaccaa gcaggtagca ttaagcggtt ttgcatccaa gcgaaaatcc
     6121 aaggaattgc acgcaaactc tccactccgc cttttggatt acgttttgca gggcgtgagc
     6181 caagcggcag acgggaaagt tcttgctctg gtgtagcaga gcggaaatac ggtacgaagt
     6241 ctagctcgcc acgcaccata tcacggtaaa tttggcaaga aatatcggag gcttttgcta
     6301 gcacatctcg ccattgctgc tttggctccg gtggtgggaa aatattcgct tctaaaatcg
     6361 cactggcata gagttctaaa ctttcaactg ccacggcagg taagcctaat ttaaagcgga
     6421 tcatttctcc ttgttcggtc actcgtaagc catttttgag tgagcgaggt ggctgagaaa
     6481 gtaaggctgc gtgagccggt gcgccaccac gcccgatagt accaccacga ccgtggaata
     6541 aggttaattc aatattatat ttttcacata aattaaccag agcttcttgc gcccgatatt
     6601 gcgcccagcc ggcagcaaac attccggcat ctttggcgga atcagagtag ccgatcataa
     6661 tcatttggta attgttgatg acgccacgat accagccgat attaaataaa tcggtcatca
     6721 ctttttcact atgatctaaa tcgcctagcg tttcaaataa tggggcaacc ggaatagtaa
     6781 atttgcaccc cgcctctttg agtaaaaggt gaaccgagag tacatcagag gcctctcttg
     6841 ccattgaaat gacataggct gaaatgacac cttcaggttg ctcggcaaca attttacaag
     6901 tgtctaacac ttctttagtt tcagggcttg gagtccagtt ggttggaatc aatgggcggc
     6961 gagaactgag ttcacgcact aagaatgcct gtttatcatc ttccgtccag tgagcataat
     7021 cgcctaagcc gatatagcgg gtaatttctg caatcgccat ttcgtggcgg gtactttctt
     7081 ggcgaatatc taagcgtgat aaacctaaac caaaacagtt tatacgacgt aagcaatcta
     7141 gtaatgcacc atttgcaata attcgcatac cacaggcttg taatgactca tagcaatcaa
     7201 aaagcggttc ccacaattgc tgatctgaag ttaaaatgtc actttcatca atagttgaaa
     7261 ttttaccttc caataattcc gcatagtaaa tttcggtatt aattaatttc tggcgtaata
     7321 cttttagtaa tacgcgatat ggctctaaat ggttgccata tttagcacga aatgcagggg
     7381 tacactgtgt aatcgataat tcttcagcaa gatttttaat atcttgtaag aacaattccg
     7441 tggctttcca acggttcatt cttaatacac ggcgagttgt ttctgccgtg acgaacgggt
     7501 taccgtcacg gtctccgccc atccaagaag aaaaacggac aggggctaaa tttaccggat
     7561 attgcacacc aaagtgtttt tctaaataga agttaagctg acggcaaaat tccggcacgg
     7621 ctttccataa actattttca atgactgcca taccgccttt ggcttcatca acaggggttg
     7681 ggcgttgggt tctgatttca ttagtatgcc aagcaagggc aatcagttgc attaaacggc
     7741 gcttgatttt atagctttct gcctcagtta aatcatcatg ttccaacaaa ttcaaacatt
     7801 tattgatttc aacgtgttta tgccccagcg aacggcgggt tacttccgtt gggtgagctg
     7861 ttagcactaa atcaatcatt aggctttcca cggttttaat cactttttca acggggatat
     7921 tttgtgattt tagacgaagg aacagagagt ctaatgagcg actaccaagt gattcatcaa
     7981 tatgatggcg agaaacagtt tgatgttgtt cagcaatatt tgttagattt agaaaatggc
     8041 taaatgcacg tgcaacgggt aagacatcat cgttagaaat attggctaat ttatctaata
     8101 gctgttcacg ggcgttttca tcgccggcac gagaattgcg agataacaca cgaatgcttt
     8161 cgatgagttc tagaatgtaa tttccttgcg catcacgaat cgtttctccc aaaaattcac
     8221 ctaacatatg gatattatgc tgaattgttg aatattgctg gttcataaaa aattcctatg
     8281 gtaaacataa attaaattag gtctaaatat gccgaaaatc gctgaaaata gcaaatagat
     8341 ttaatttaat ttttgaatta aatgataaaa cgcaaaaaat agctgtcaat atgtgtttaa
     8401 aactgttgtt cggttttgat aacttgcctg ttgtttatgt gctattcact gttattcaag
     8461 ttggcttatc cattaatggt tttaaaggta ttaaatggtt ggaaaatgtt tcttgtgtgt
     8521 tcctcatcgg tattcttgct tatatgcttt atgttgtgaa tacaaaattc tctgtagaaa
     8581 taggcgagcg ctttgccaat attgaaggca cttggggaat gccattctgg gctgcaacta
     8641 cagcattctt gggtatttat tcaacaatga ttttaaatgc ttccgattat tctcgccacg
     8701 ttaaaaaagg aacaacccca acagcaacag gtgtgattta tgtattatca atcctccctg
     8761 taaccttatt tatgggttta atagggttgt tagttacggc agctacaggc aatagtgacc
     8821 caattgaagt atttgcaact gcaatggata ataaattttt aacagtaata acgttattat
     8881 tcattgcttt tgcacaggtt acgacaaacg tgttgaataa tattgttccg ccatcttaca
     8941 ttttaatgga ttcatttaaa atgaaatggt cgcatgccac cattttagtg ggcattcttt
     9001 ctatatgtgt aatgccttgg aaattggtaa ctgctgaatc agcagatgga ttatctttgt
     9061 ttattaaaat ttactcggca ttcttaggcc ctatttttgc ggtaatggtc gtcgattact
     9121 acatcttaag aaaacgtact ttaaacgtaa atgacttata taataaagaa ggtattttca
     9181 aagggattaa ctgggcagca attattgcga ttgctatcgg ttcgttttgc tcactgattg
     9241 tggtggatct ctcttggtat gtcagtttaa ttccatcagg cttgagctac tatattttga
     9301 tgagggtgtt aaaaagttcc gaagctttcc gtaaagggac agtgctagaa catcaataag
     9361 atgacaagcg gtaaaattta ttaaaaatat ttcaaactta agtgagcata aggcttatta
     9421 taaataaaac gttccgaaaa aacattgaat ttcattaaaa aattccttta tttatcaaat
     9481 aaatgcgatt tgtttcggaa cgttttttaa tgcttatttt gcaacatacg gattatcaat
     9541 ggaaagcgtt gctgtaaaca ttgtgcctcc tagtacaaaa aaaccgcttg gtttccctaa
     9601 gcggttctaa tctataagaa ctattacact acaatctgcc ccgtctcttt taagtactta
     9661 tagatacgcc ctagcataat ctgcgttggc gttttgccaa tatcctcttt tgttagcggt
     9721 gcatcagtaa tcgccttggc ggactgtgca tcaatgtatt tgtactcact tgtgatgatt
     9781 acaaagtttg ttacttctcc atcggtatca tcgcctgtac cgaccacata tttagcattg
     9841 agcgagccgt catcttg
//
LOCUS       DANMCL010000098         9773 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.099, whole genome shotgun sequence.
ACCESSION   DANMCL010000098 DANMCL010000000
VERSION     DANMCL010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9773
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.099"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            53..589
                     /locus_tag="PXF40_002291"
     CDS             53..589
                     /locus_tag="PXF40_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803584.1"
                     /translation="MFSIHSKIEAAYSNPNSSLFQFICFIRKYPKALPFGIMMIFIIP
                     PMIMLIKSYIEVNHILKNIENDKINFNHQQNKYDSIINKAKNQNSQENNLTEINSNIQ
                     ILAEKHQLTIESLQWNLEQGKSIELSIIGNSRSLFDFIHSVKQIPYLKYNAISLIKSR
                     QDRKVEMNTTLVILANKE"
     gene            592..1005
                     /locus_tag="PXF40_002292"
     CDS             592..1005
                     /locus_tag="PXF40_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803585.1"
                     /translation="MRNWFLFITLFISFSVKANDPFFGEKQETQASGNIAESNVEFAK
                     NTENITACKVPDNLSAKNIVTDFDKMTLIGLVKINEVMRALFIDEKQQLLALKENDLL
                     NNEIEIKHINLKSITYINWKLTKDCNIPYEINIKL"
     gene            1014..2327
                     /gene="pilQ"
                     /locus_tag="PXF40_002293"
     CDS             1014..2327
                     /gene="pilQ"
                     /locus_tag="PXF40_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HDL5803586.1"
                     /translation="MWRIFIYFLCGFSLAYANTISIVLKNAPTSLIFTYLAEETGKNM
                     VLDDNIETKSTLRLENKSVDEIFKTLGKVNKLSLTQEDDIVYIHKKEEKAADLTPLPI
                     MNLQNNGQNTPLVTAPKLITKTLKLHYAKASEVIESLTKGSGTFLSENGYIHFDERSN
                     SLIVKDSAKSLKNIENLVKQLDQPTEQIAIEARIVTISSEHLQELGVRWGIFSRGAGH
                     YKFGGRLEGNGLNNVTNNLNVNFPITGGASAVLQVSSINSRVLDLELSALEQENSVEI
                     IASPRLLTTNKKPASIKQGTEIPYVMYNTKSEATDVEFKEAVLGLEVVPHLSTQNQIL
                     LDLIVTQNSPNSQSGSSGLITIDKQELNTQVFAKHGETIVLGGIFQHLTQKGEDKVPI
                     LGSIPFIKRLFSQTRDKISKRELVIFVTPYILQSNEKSSNRKKSK"
     gene            2408..2821
                     /gene="nusB"
                     /locus_tag="PXF40_002294"
     CDS             2408..2821
                     /gene="nusB"
                     /locus_tag="PXF40_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HDL5803587.1"
                     /translation="MKISPRRRARECAVQAIYSWYISQNTVEEVELAFVTDQDMKGVD
                     MPYFRKLFRGVVDNVEAIDEALRPYLDRKESDVDPIERSILRLSTYELKFEHDVPFRV
                     VINEGIEVAKVFGSDDSHKYINGILDKLAPALGRK"
     gene            2884..3864
                     /gene="thiL"
                     /locus_tag="PXF40_002295"
     CDS             2884..3864
                     /gene="thiL"
                     /locus_tag="PXF40_002295"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HDL5803588.1"
                     /translation="MGEFDIIERYFNASQRPPRKDVLLSIGDDCALTSLKPNQQLAIT
                     TDTLVCGTHFLPTISPADLAYKSVASNLSDLAAMGAEPAWISLALTLPEINHDWLAEF
                     SEHFFEILDHYNVDLIGGDTTCGPLSLTITAQGIVPQDRGLFRHNAKVGDWIYVSGTL
                     GDSAGGLQLLLNQQSEQVNWNKEQSYLIQRHLRPTPRVLLGLTIASIANAAIDISDGL
                     LSDLSHILKRSDCGAVLNLENFPLSDVLLSCYSRTEAEYFALNGGEDYELCFTVPNDN
                     KAKLDKALANIGVTYTCIGQIRSAKEGLTLLRHNQPVTLPSQRGYDHFKK"
     gene            3869..4342
                     /locus_tag="PXF40_002296"
     CDS             3869..4342
                     /locus_tag="PXF40_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HDL5803589.1"
                     /translation="MKPINLKNPIHFFAFGFGSGLLKPAPGTWGSLAGLIVAIALWSI
                     TQSALFFGLLTLVSFIAGCVICTKASQDLEVHDDGRIVWDEIVAIFLMFTCLPEYNLL
                     GYLLAFISFRIFDILKPFPIRYFDEKLESGLGIMFDDILAAIFALISLHLLYYFI"
     gene            4349..4972
                     /locus_tag="PXF40_002297"
     CDS             4349..4972
                     /locus_tag="PXF40_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HDL5803590.1"
                     /translation="MLTILFIHFAGLISPGPDFFYVVRQSASHSVKSGVLAATGISIG
                     IIFWAAFAIFGLAWLSNSIGSLFQYAIMIIGGCYLVYIGSQMVRVTENIIFVENKAQL
                     TPLNPWQEIKKGLLINIFNAKAGVYFTSVISAYVDNLSNTLQMFELLLLFVVSTFIYF
                     CVVALLFSRRPVRLFYAKYSRYIDNISGVIFILFGSMLIYEGFSHFI"
     gene            5084..5689
                     /gene="ruvA"
                     /locus_tag="PXF40_002298"
     CDS             5084..5689
                     /gene="ruvA"
                     /locus_tag="PXF40_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005686751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HDL5803591.1"
                     /translation="MIGRLHGKIIEKQPPEILLDVQGVGYELLLPMTSFYSLPQIGEE
                     ATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNGVGPKLALAILSAMSVSQFATAI
                     ENEELAKLTKIPGIGRKTAERLLVELKGKFKGMAQSDFFVEVSHEQIVASNTPDPANE
                     ALDALIALGYKPADAEKMIKKVNKSGATSEQLIREALKNSL"
     gene            5826..6830
                     /gene="ruvB"
                     /locus_tag="PXF40_002299"
     CDS             5826..6830
                     /gene="ruvB"
                     /locus_tag="PXF40_002299"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HDL5803592.1"
                     /translation="MIEADRIISASPKREEEVIDRAIRPKLLADYVGQPSVHDQMEIF
                     IKAAKLREEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLT
                     NLEPYDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGA
                     TTRAGSLTSPLRDRFGIVQRLEFYSVDDLTLIVKRSADCLNLNLSADGAYEVARRSRG
                     TPRIANRLLRRVRDYADVRNNGIITSDIAKQALAMLDVDSEGFDFMDIKLLQAIVERF
                     DGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSRTYAHLGITQID
                     "
     gene            complement(6929..7612)
                     /gene="artM"
                     /locus_tag="PXF40_002300"
     CDS             complement(6929..7612)
                     /gene="artM"
                     /locus_tag="PXF40_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HDL5803593.1"
                     /translation="MWWDYLVEISQGIGTSLQLTFVALIIAFILAIILTFILSLENRP
                     LKWLVNGFITLFTGTPLLIQFFLIYSGPGQFEWITESAAWVLLSDAWFCAMLALALNS
                     AAYSTLLFHGAVKAIPKGQWETCAALGLSRLDTLKILVPYALKRALPSYSNEIVLVFK
                     GTSLASTITIMDIMGYARQLYGTEYDALSIYGMAGVIYLVITGIMTIVLRKLESRVLA
                     FERFETEKA"
     gene            complement(7612..8283)
                     /gene="artQ"
                     /locus_tag="PXF40_002301"
     CDS             complement(7612..8283)
                     /gene="artQ"
                     /locus_tag="PXF40_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HDL5803594.1"
                     /translation="MSSDILNLLVNATLMTLGIALASLLIGMLLSIFFVVLETSKIAC
                     IRKPTSIIITLLRGLPEILVVFLIYFGLIQVIFLITDEFAELNAFWCGAIALGIIFAA
                     YASQSLRGAIKAIPVGQWESGTALGLSRAQVFVRIILPQVWRHALPGLSNQWLVLLKD
                     TALVSLIGVDDLMRQSELINANTHQPFTWYGIAALIYLAITLISQRVIKVLEGRFTRF
                     ERGVA"
     gene            complement(8283..9008)
                     /locus_tag="PXF40_002302"
     CDS             complement(8283..9008)
                     /locus_tag="PXF40_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter substrate-binding domain-containing
                     protein"
                     /protein_id="HDL5803595.1"
                     /translation="MKKLLLASAIAFATLSANAQETITFAMEPSYAPFETTNEKGEVI
                     GFDVDIAKALCEELKATCEFKTQSFDSLIAGLKFKNFDAIISGMDITEARQKQVAFTN
                     AYLENSVSYVAMKGKFTPETAKNVGVQNGTTFQQYLSKNAKQYNLKPYASLQSAVLDL
                     KNGRVDMVFGDTPVLAEWLKTEKELDFVGEKVVDKAFFGNGYGIAVNKSNTALLEKLN
                     SALATIKTNGKYEQIYNTWMAGK"
     gene            complement(9034..9768)
                     /gene="artP"
                     /locus_tag="PXF40_002303"
     CDS             complement(9034..9768)
                     /gene="artP"
                     /locus_tag="PXF40_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007523332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HDL5803596.1"
                     /translation="MAIRIQNVNFFYGSNQALFDINLEIEKGDTVVLLGPSGAGKSTL
                     IRTLNLMEVPQSGTLAIANHQFDLTAKTDSKAVSLLRREVGMVFQQYHLWPHLTVMQN
                     LIEAPMKVLGLSKEEAVARAKGHLARLRLSEFAERFPLHLSGGQQQRVAIARALMMQP
                     QVLLFDEPTAALDPEITAQVVDIIKELQSTGITQVIVTHEVGVARKVASKVVYMEKGT
                     IIEQGDASCFESPKTEQFAQYLSHSE"
BASE COUNT         3043 a         2022 c         1827 g         2881 t
ORIGIN      
        1 cataaaaatg aaatccaatt tattttcaca ctgaaacata aaggtaatta atatgttttc
       61 tatacattct aaaattgaag ctgcatattc caatccaaac agttcattat ttcagtttat
      121 ttgctttatc cgaaaatatc ctaaagcatt accatttggc attatgatga tattcatcat
      181 tccacctatg attatgttga taaaatccta tattgaggtt aatcatattt taaaaaatat
      241 agaaaatgac aagattaact ttaatcatca acaaaacaaa tatgactcaa ttatcaataa
      301 agctaaaaat cagaacagcc aagagaataa tttaaccgaa ataaacagca acatacaaat
      361 attagctgaa aaacaccaac taaccattga aagtttacaa tggaatttag aacaaggtaa
      421 aagtattgaa ttgagtatta tcggcaatag ccgatcttta tttgatttta tccattcagt
      481 taagcaaata ccttatttga aatacaatgc gattagcctc atcaaatctc ggcaagacag
      541 aaaagttgaa atgaatacta ccttagtcat attagctaat aaggaataac aatgcgtaat
      601 tggtttttat ttattacttt atttatcagt ttttctgtaa aagcaaatga tcctttcttt
      661 ggagaaaaac aggaaactca agcctcaggc aacatcgctg aaagcaatgt ggaatttgca
      721 aaaaatactg aaaacatcac cgcttgtaaa gtacctgata acctttctgc aaaaaatata
      781 gtaactgatt ttgacaaaat gacactgata ggattagtta aaatcaatga agtaatgcgt
      841 gcattattta ttgatgaaaa acaacaatta cttgctctaa aagaaaatga cttgcttaac
      901 aatgaaattg aaataaaaca tattaatctt aaatccatta cttatattaa ctggaaatta
      961 actaaagatt gtaatatccc ttatgaaatt aacatcaaat tatagaggtt gatatgtggc
     1021 gaatttttat atatttctta tgcggttttt cattagccta tgcgaatacc atttccatag
     1081 ttttaaaaaa tgctccaact tcgcttattt ttacttattt agcggaagaa accggtaaaa
     1141 atatggtgct tgatgataat attgaaacca aatcaacact acgattagaa aataaatcgg
     1201 ttgacgagat ttttaaaacg cttggcaaag tcaataaatt atccttaacg caagaagatg
     1261 atattgttta tattcacaaa aaagaggaaa aagcggctga cttaacgcct ctgccaataa
     1321 tgaatttgca aaataatggg caaaatacac cgcttgtcac cgcccctaag ttaatcacaa
     1381 aaaccttgaa actacattat gcaaaggctt cagaggtgat tgagtcgtta accaaaggca
     1441 gcggaacgtt tttatcggaa aacggttata ttcactttga tgaaagaagc aatagcctga
     1501 ttgtgaaaga cagtgcaaaa tcgcttaaaa atatcgagaa tttagtaaaa cagctcgacc
     1561 aacccaccga gcaaattgcg attgaggcta gaattgtcac tatcagtagc gagcatttgc
     1621 aagagcttgg cgttcgctgg ggaatttttt ctcgtggggc tgggcactat aaatttggcg
     1681 gacggctgga aggcaatgga ctcaacaatg tcaccaataa cttaaatgta aattttccga
     1741 ttactggtgg agcatctgcc gtattacagg tttcgtccat taatagcaga gtgcttgatt
     1801 tagaattaag tgcattagaa caagaaaata gtgtggaaat tattgccagc ccacgcctgt
     1861 taaccaccaa taaaaagccg gcaagtatca agcaaggcac ggaaattcct tatgtgatgt
     1921 acaacaccaa atcggaagcc accgatgtcg aatttaaaga agcggtatta gggcttgaag
     1981 tcgttccaca cctttcaacc caaaatcaaa ttctactcga tctgatcgtt acccaaaatt
     2041 cgccaaattc ccaatccggc agtagtggct taattacgat tgataaacaa gagctaaata
     2101 cgcaagtatt tgccaaacac ggcgaaacca ttgtacttgg tggtattttt caacatttaa
     2161 cccaaaaagg cgaagataaa gtgccgattt taggctcaat tcccttcatc aagcggttat
     2221 ttagtcaaac tcgagataaa atcagcaaaa gagagctagt catttttgtg acgccttata
     2281 tccttcaatc taatgaaaag agcagcaacc gcaaaaaatc aaaatagcac atcataaacg
     2341 caagcaaaaa taggggaagt gtgatagaat cagccgtcat tttttgagtt aaagatttag
     2401 aggttttatg aaaatttccc cacgtcgccg tgcaagagaa tgtgcggtgc aagccattta
     2461 ttcttggtat atttcccaaa acacggttga agaagtggaa ttggcgtttg tgaccgatca
     2521 agatatgaaa ggcgttgata tgccttattt ccgtaaactt ttccgtggcg ttgtggataa
     2581 tgtagaagcc attgatgaag cattacgccc ttatttagat cgtaaagagt cagatgttga
     2641 tcctattgaa cgttctattt tgcgtttatc aacttacgaa ttaaaatttg aacacgatgt
     2701 gcctttccgt gtagtcatca atgaagggat tgaagtcgct aaagtgttcg gctctgatga
     2761 cagccacaaa tacattaacg gcattttaga taaattagcc ccagcattag gcagaaaata
     2821 ataagattcc ccaatttata cataaattgg ggattttgat tataacgctc aaggagattt
     2881 tttatgggtg aatttgatat tatcgaacgc tattttaatg cttctcaacg cccacctcgc
     2941 aaagatgttt tactttctat cggcgatgac tgtgcgctca catcactcaa accaaatcag
     3001 caacttgcga tcacaaccga tacccttgtt tgcggcactc attttctacc gactatttca
     3061 cctgccgatc tcgcttataa aagtgtggcg tccaatttaa gcgatcttgc cgcaatgggt
     3121 gcagaacctg catggatctc tttagcctta accttacctg aaattaatca cgattggcta
     3181 gctgaattta gtgaacattt ctttgagatt cttgatcact ataatgttga tttgattgga
     3241 ggggatacta cttgtggacc actatctttg acaatcacag ctcaagggat tgtgccacaa
     3301 gatagaggct tattccgcca taatgctaaa gtaggcgatt ggatctatgt ttccggcaca
     3361 ctcggtgaca gtgcaggtgg tttgcaactt ctgctaaatc agcaaagcga gcaagtgaat
     3421 tggaataaag agcaaagcta cctgattcaa cgccatttac gcccaacacc tcgagtttta
     3481 cttggcttga ctatcgcctc tattgctaat gcagcgattg atatttcaga tggtctattg
     3541 tctgatttaa gccatatttt aaagcgcagt gactgtggtg cagtattaaa ccttgagaat
     3601 ttccccttgt ctgacgtctt acttagttgt tattctcgaa cagaggcaga atattttgcc
     3661 ttaaacggtg gcgaagatta cgaactctgc tttaccgtgc caaatgacaa caaagccaaa
     3721 ttagacaaag cattagccaa tatcggagta acttatacat gtattgggca aattcgttcg
     3781 gctaaagaag gtttaaccct attacgtcat aatcagcctg tcaccttgcc ctcacaacga
     3841 ggctacgatc attttaaaaa ataacgcaat gaaaccaatt aatcttaaaa atccgattca
     3901 tttttttgcc tttggctttg gttcaggctt attaaagcct gctcccggca cctggggtag
     3961 cctcgccggg ctaattgtag caatagcctt gtggtctatc acacaatccg ccctgttttt
     4021 cggcttactc accctagttt cttttattgc cggttgtgtt atttgcacca aagccagcca
     4081 agatctagaa gtacacgatg acgggcgaat tgtttgggac gaaatagttg ccatcttttt
     4141 gatgttcacc tgtttgcctg aatacaatct tcttggctac ctgctcgcct ttatcagctt
     4201 tcgcattttt gatattttga agccttttcc aatccgctat tttgatgaaa aattagaaag
     4261 cggtttaggc attatgtttg atgatattct cgcagccatt tttgccctga tttcacttca
     4321 tcttttatat tatttcattt aaaaatttat gctcactatt ttatttattc attttgccgg
     4381 gcttatcagc cccggccccg atttcttcta tgtcgtcaga caatccgcca gccactcagt
     4441 taaaagtggg gtacttgccg caaccggaat ctcaatcggc attatttttt gggcagcctt
     4501 tgcgattttt ggtttagcgt ggctcagtaa tagtattggc tcgctgtttc aatatgccat
     4561 tatgattatc ggtggctgtt acctggttta tattggctct caaatggtac gggtaaccga
     4621 aaatatcatt tttgttgaaa ataaagctca actcacgccg ctaaaccctt ggcaggaaat
     4681 taaaaaaggc ttattaatca atatctttaa tgccaaagct ggcgtttact ttaccagcgt
     4741 catttcagcc tatgtagata atttaagcaa taccctacaa atgttcgaac tacttctact
     4801 ctttgtggta agtaccttta tttatttctg tgtggtggca ctactctttt ctcgccgacc
     4861 ggtcagactg ttctatgcca aatatagtcg ctatattgac aatatctcag gcgtaatttt
     4921 catcttattc ggctcgatgc tgatttatga aggattcagc cactttatct aatcacaagc
     4981 ggtctgattt cactaaaaat ttgcaaattc cgctatcaat aaatagtgtt attttataca
     5041 gtttctgcta tgctactgcc aattttaact ctgagagaac aaaatgattg gacgattaca
     5101 cggcaaaatt attgaaaagc aaccgcctga aattttatta gacgtgcaag gggtaggcta
     5161 tgaactactg ctcccgatga ccagtttcta cagcctgcca caaattggcg aagaggcgac
     5221 tattttcacc catttagtgg tgcgagaaga tgctcacttg ctattcggct ttgcccaaaa
     5281 acaagataga actctattcc gtgaattaat taaaaccaac ggtgtcgggc cgaagctcgc
     5341 gttggcaatt ctatcagcaa tgtcggtgtc gcaatttgcc accgcgattg aaaatgaaga
     5401 gctggcaaaa ttaaccaaaa ttccgggaat cggtcggaaa accgcagaac gcttattggt
     5461 ggaactcaaa ggcaaattta aaggaatggc acagagtgat ttctttgtgg aagtatcgca
     5521 cgagcaaatt gtggcaagta atacgccaga cccggcaaat gaagcccttg atgccttaat
     5581 agccctaggc tacaaacctg ccgatgcgga aaaaatgatt aagaaagtga ataaatccgg
     5641 tgcaacgagc gaacagctta ttcgtgaggc gttaaaaaat tcattatgat attgatagta
     5701 tagggcgaaa gatatttcgc ccctacaatc tcatttttaa aaatatatgt gtaggggcaa
     5761 atcaatattt gccctcatga gtaatatagg gtaataccat tccactacaa caataatcta
     5821 aatgtatgat tgaagcagat agaatcatca gtgcctcgcc taagcgtgag gaagaagtta
     5881 tagaccgagc aatccgcccg aaactgcttg ccgactatgt cgggcagcct tctgtgcatg
     5941 atcaaatgga gatcttcatc aaagccgcta aattgcggga agaggcatta gatcacttgc
     6001 tcattttcgg cccgcccggt ttgggaaaaa ctacccttgc caacattgtg gcaaacgaaa
     6061 tgggggtgaa tattcgcaca acttcagggc cggtgctgga aaaagcaggc gatttggcag
     6121 caatgctgac caaccttgaa ccttacgatg tgctgtttat tgatgagatt caccgccttt
     6181 ctccagcgat tgaagaagtg ctttatcctg caatggaaga ttaccagctc gatattatga
     6241 ttggggaagg acctgctgct cgttccatca agctcgatct accgcctttt acccttgtag
     6301 gggcaaccac ccgtgccggc tcactgacct caccgttacg agatcgtttt gggattgtac
     6361 aacgcttaga attttactca gtggacgatc ttactctgat tgtcaaacgc agcgccgatt
     6421 gcttaaatct caatttgtcg gcagacggtg cttatgaagt ggctcgccgc tcccgtggca
     6481 caccccgtat tgccaaccgc ttactccgcc gagttcggga ttacgccgat gtgcgtaata
     6541 atggcattat tacctcagac attgccaaac aagctctggc aatgctcgat gtggattcgg
     6601 aaggctttga ttttatggac attaaactgt tgcaagcgat tgtagaacgc tttgatggcg
     6661 ggccagttgg attagacaat cttgcggcag ctatcggcga agaacgagat acgattgaag
     6721 atgtgctaga gccttatctg attcagcaag gctttctaca acgcacacca agaggcagaa
     6781 ttgctaccag cagaacctat gcccatttag gtataaccca aatagattag tcatatttct
     6841 aaaggcattg atacataaat aaaaagcgga tagttagtac tatccgcttt catttgcaaa
     6901 aaatcaataa aatttgaccg cttatccgct aggctttttc agtctcaaaa cgctcaaaag
     6961 ctaatactct gctttctaat tttctgagaa cgattgtcat aatgccggta attaccaagt
     7021 aaataacccc tgccatacca taaattgata atgcgtcata ctctgtacca taaagctggc
     7081 gagcatagcc cataatatcc ataatcgtaa tggttgaagc aagcgatgtg cctttaaaaa
     7141 ctagcacaat ctcattacta taagaaggta aagcacgttt taatgcgtaa ggcactaaaa
     7201 ttttcagtgt atctaaacgg ctcaaaccaa gggctgcgca agtttcccat tgccccttcg
     7261 gaatcgcttt taccgcaccg tggaacaaca atgtcgaata ggcagcactg tttaacgcta
     7321 aagccaacat tgcacagaac caagcgtcgg ataataatac ccaagccgca ctttctgtaa
     7381 tccattcaaa ttgccccggg ccactataaa tcaagaaaaa ttgaattaat aaaggcgttc
     7441 cggtaaaaag cgtaataaat ccgtttacca accactttaa cggacgattt tctaacgaga
     7501 gaataaacgt aagaatgatc gctaaaataa aggcaatgat gagcgccaca aaagtgagct
     7561 gtaggctggt gccaataccc tgtgaaattt caactaaata atcccaccac attaagcaac
     7621 tcctcgctca aaacgggtaa atctaccttc taatacttta atcactcgct ggctaattag
     7681 agtaatcgct aaataaataa gtgctgctat cccataccaa gtaaaaggtt gatgagtatt
     7741 agcattaatt aactccgatt gacgcattaa atcatctacc ccaattaacg ataccaatgc
     7801 cgtatctttt aacagcacta accactgatt gcttaagcct ggtaaagcgt gtcgccagac
     7861 ttgagggaga ataatgcgaa caaatacttg cgctcggctt aaccctaacg ccgtaccaga
     7921 ttcccactgc ccaactggaa tagctttaat tgcaccacgt aaagattggg aagcataagc
     7981 agcaaaaata atacccagcg caatagcccc acaccagaaa gcatttaact ccgcaaactc
     8041 atcggtgatc aagaaaataa cttggataag accaaaatag atcaaaaata ccactaaaat
     8101 ctccggcaac ccacgcaata atgtaattat tatactagtt ggtttacgga tacatgcaat
     8161 cttactggtt tcaagtacca caaaaaagat tgacaataac attccaatca agaggcttgc
     8221 cagcgcaatc cctaaggtca tcagggttgc gttgacaagt aagtttaaaa tatcgctaga
     8281 cattatttcc cagccatcca agtattataa atttgctcat atttaccatt tgttttgatg
     8341 gtagctaaag ccgaatttaa tttttcaagc aatgcagtgt tagatttatt taccgcaata
     8401 ccatatccat taccaaaaaa ggctttatcg actacttttt cacccacgaa atctaactct
     8461 ttttcggttt ttagccactc tgccaatact ggtgtatcac caaataccat atcaacacgt
     8521 ccatttttta aatctaacac tgctgattgt aggctagcgt aaggttttaa attatattgt
     8581 ttggcatttt tgcttaagta ttgttgaaaa gttgtaccat tttgcacgcc gacattctta
     8641 gctgtttccg gtgtaaattt ccccttcatt gcgacataac ttactgagtt ttctaaataa
     8701 gcattggtaa aggcaacctg tttttgacgc gcttcagtaa tatccatgcc tgaaataatt
     8761 gcatcaaaat ttttaaattt taatcccgca attaagctat cgaatgattg cgttttaaat
     8821 tcgcaagttg cttttagttc ttcacataat gcttttgcaa tatctacatc aaagccaata
     8881 acttcacctt tttcatttgt tgtttcaaaa ggggcgtaag aaggctccat cgcaaaagtg
     8941 atagtttctt gtgcattggc agaaagcgtt gcaaatgcga tagcggaagc taataataat
     9001 tttttcattg ttgtgtcctt ttgttgttat agattactct gagtgagata aatattgagc
     9061 aaattgctct gttttcggtg attcaaaaca acttgcatca ccttgttcaa taattgtacc
     9121 tttttccatg tacaccactt tgcttgccac cttacgagca acgcctactt cgtgagtcac
     9181 aatcacctga gtaatgcctg tagattgcaa ttctttaata atatcaacta cttgtgcagt
     9241 aatttccggg tcaagtgctg cggtaggttc atcaaataat aagacctgtg gctgcatcat
     9301 cagtgctctg gcaatcgcca cccgttgttg ctgaccacct gaaagatgca gtgggaaacg
     9361 ctcggcaaac tcgctcaaac gcaaacgtgc caaatgtcct tttgctctgg caaccgcttc
     9421 ttctttgctt aacccaagca ctttcatcgg ggcttcaatt aagttttgca ttacggttaa
     9481 atgcggccat aaatgatact gctggaacac cattcccacc tcacggcgta acaaactcac
     9541 cgctttgctg tcggttttag cagttaaatc aaattgatga tttgcaatcg ccaaagtgcc
     9601 tgattgcggt acttccatta agtttaaggt tcgaattagg gtacttttac ctgccccact
     9661 cgggccaagc aatacaacag tatccccttt ttcaatctct aagttaatgt caaataaggc
     9721 ttggtttgag ccataaaaaa aattgacatt ttgaatacga attgccattc gtt
//
LOCUS       DANMCL010000099         9360 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.100, whole genome shotgun sequence.
ACCESSION   DANMCL010000099 DANMCL010000000
VERSION     DANMCL010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9360
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.100"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(59..343)
                     /locus_tag="PXF40_002304"
     CDS             complement(59..343)
                     /locus_tag="PXF40_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803597.1"
                     /translation="MIREVIDFIKNNKWYVLLVVLLLGLYFYQFHGGLSSDSEKWDHF
                     GSYIGGIFSAVTLLSVLHGMQLERKRFKEQKEEFENDKRVLEKRRRKEDF"
     gene            complement(438..1526)
                     /gene="hisB"
                     /locus_tag="PXF40_002305"
     CDS             complement(438..1526)
                     /gene="hisB"
                     /locus_tag="PXF40_002305"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018355873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HDL5803598.1"
                     /translation="MQPTLFIDRDGTLIDEPKTDFQIDSLEKLKFEKNVIPALLKLKG
                     KYRFVMVTNQDGLGTSSFPQADFDKPHNAMMALFNSQGIEFDDVLICPHKPEDGCDCR
                     KPHTKLLQKYIDRQLFDPANSFVIGDRATDVQLAENLGIRALQYHPEKLNWDLIAEKL
                     LGEAVTNIGERPKRFAEVIRKTKETDIKVQVWLDETGNNEISTGVGFFDHMLDQIATH
                     GGFRMNITTKGDLWIDEHHTVEDTALALGTALKQAIGDKRGIARFGFVLPMDESRAEC
                     AMDLSGRPFIKFKADFKRDKVGDFSTELTEHFFQSIAFTMLATLHIKAKGDNDHHKIE
                     SLFKVFGRTLRQCIRIEGNELPSSKGVL"
     gene            complement(1711..2778)
                     /gene="hisC"
                     /locus_tag="PXF40_002306"
     CDS             complement(1711..2778)
                     /gene="hisC"
                     /locus_tag="PXF40_002306"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HDL5803599.1"
                     /translation="MTISQLSRKNIQALTPYQSARRLGGSGDVWLNANEYALSPNFDL
                     TDRTFNRYPEPQPQAVIEGYARYAGVAPENVLVSRGGDESIELIIRAFCEANDSILYC
                     PPTYGMYAVSADTCGIATKTVPLTADFQLDLAQIKANLEGVKVVFVCSPNNPTGNLIK
                     RSDLFELLQITAGKAIVVVDEAYIEFCPEARLVSELANFPHLAIIRTLSKAFALAGLR
                     CGFTLANAELIGVLQKVIAPYPLPVPVSDIAAQALSPQGIEQMKTRVAEVITLRAELQ
                     KNLENLPLVEQVFDSEANYLLFKCQDGQKVFKALWEQGIILRDQHKALGLQNCIRITV
                     GAREENLRVVEAITALSQFQR"
     gene            complement(2808..3248)
                     /locus_tag="PXF40_002307"
     CDS             complement(2808..3248)
                     /locus_tag="PXF40_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HDL5803600.1"
                     /translation="MSINISPLASKNLTEWKLLWQQYLDFYQVNLADDIIQSTWQKVS
                     ESENVKGFGAFVDNRMVGFVHIVIHPNTWNLTECCYLEDLFVLAEYRNQGIGKELIEY
                     IYRYAQEKGYNRVYWVTDKNNHQAQQLYNKLANDSGIIQYRKNF"
     gene            complement(3315..3692)
                     /locus_tag="PXF40_002308"
     CDS             complement(3315..3692)
                     /locus_tag="PXF40_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HDL5803601.1"
                     /translation="MKNPIEIYQSQDGKTQVSVQFDKETVWLSLQQMADIFGRDKSVI
                     SRHLRNIYQEGELEREATVAKNATVQIEGAREVVRLKDYLVKGYALNERRLQERGIEF
                     EQVIGLLSQYTGCLSLVGGRKFA"
     misc_feature    complement(3714..3836)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00514"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="His leader region; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF00514"
     gene            complement(3966..4955)
                     /gene="rsmC"
                     /locus_tag="PXF40_002309"
     CDS             complement(3966..4955)
                     /gene="rsmC"
                     /locus_tag="PXF40_002309"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HDL5803602.1"
                     /translation="MLSLESEVLERHLALFENKSVLLFGDVRDDFARQLQSRAEKVAV
                     FSSYFDYARHHSEVEFGLECGLSAELAVFYWTKNKQECQFQLLQWLSQCQAGQEMLII
                     GENRAGVRSVEKLLEPFGNIAKIDSARRCGLYHFELQTVPTFDCKKFWKSYRLQDLDV
                     FDLPAVFSSAELDNGTKLLLSTFDKADRLKGKVLDLGCGAGVIGATLKQQFPKIKLTM
                     SDIHAMALESGRRTLAENQLEGEVVASDVFSHINERFDLIVSNPPFHDGVDTAYRAVE
                     ELIFQAKNHLTKGGELRIVANAFLPYPDLLDKAFGKHDVLAKSTKFKVYSART"
     gene            5085..5507
                     /locus_tag="PXF40_002310"
     CDS             5085..5507
                     /locus_tag="PXF40_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HDL5803603.1"
                     /translation="MNRRDLLLQEMGISQWVLTNPQVLKGDAQIRLNNAVKLVVVCEE
                     DHQHSRLFADILRALKLKNSEYQWLTGEQSQRLVFEHSPIFWLIQAEEQAVKMAKSFT
                     NQTAWKNESWQDLAKSTTKRQLWQQIDTFSAQFGEQRD"
     gene            5500..5937
                     /gene="rimI"
                     /locus_tag="PXF40_002311"
     CDS             5500..5937
                     /gene="rimI"
                     /locus_tag="PXF40_002311"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HDL5803604.1"
                     /translation="MIEQIQAEDFEQLFEIEQQAHLVPWSKGTLLNNQGEKYLNLKVV
                     EQNKIVAFAISHIVLDEATLFNIAVAPDFQGKGIGKRLLSELILQLQQRKLTTLWLEV
                     RESNHSARKLYDSLGFNEVTTRKNYYPTPNGSKENAVVMALYL"
     gene            complement(5986..7833)
                     /gene="typA"
                     /locus_tag="PXF40_002312"
     CDS             complement(5986..7833)
                     /gene="typA"
                     /locus_tag="PXF40_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HDL5803605.1"
                     /translation="MQNVDISKLRNIAIIAHVDHGKTTLVDKLLQQSGTFGETRGDVD
                     ERVMDSNDLEKERGITILAKNTAINWNGYHINIVDTPGHADFGGEVERVLSMVDSVLL
                     VVDAFDGPMPQTRFVTQKAFAHGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLGASD
                     EQLDFPIIYASALNGVAGLEHEDLAADMTPLYEAIVKHVQPPQVELDAPFQMQISQLD
                     YNNYVGVIGIGRIKRGSVKPNQAVTIVDSEGKTRQGRIGQVLGHLGLQRFEATEAFAG
                     DIVAITGLGELNISDTICDINAVEALPALSVDEPTVTMFFCVNTSPFCGQEGKFVTSR
                     QILERLNKELVHNVALRVEETSNPDEFRVSGRGELHLSVLIENMRREGYELAVSRPKV
                     IYREEDGKKQEPFEQVTIDIEEQHQGSVMEALGIRKGEVRDMIPDGKGRTRLEYVIPS
                     RGLIGFRNEFMTMTSGTGLLYSTFSHYDDVKPGEIGQRKNGVLISNATGKALAYALFG
                     LQERGKLMIDHGVDVYEGQIIGIHSRSNDLTVNCLQGKKLTNMRASGKDDAIVLTTPV
                     RFTLEQALEFIDDDELVEVTPQSVRIRKRLLTENDRKRASRTTTSTSTH"
     gene            complement(8018..8695)
                     /locus_tag="PXF40_002313"
     CDS             complement(8018..8695)
                     /locus_tag="PXF40_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HDL5803606.1"
                     /translation="MSIAENLSQIHQQIQQISEQYQRDNVRLLAVSKTKPVEAIQAAI
                     EAGQRAFGENYVQEAVEKIEFFANRPELEWHFIGPLQSNKTKLVAAYFDWIQTVDRLK
                     IAERLNEQRPADKAPLNVLIQINISDEASKSGIEPDEMLPLAQAISQLPNLKLRGLMA
                     IPKPESEPEQQKVAFRKMQLLFNRLQTEFDDIDTLSMGMSDDMQAAIECGSTMVRIGT
                     AIFGARR"
     gene            8766..9305
                     /locus_tag="PXF40_002314"
     CDS             8766..9305
                     /locus_tag="PXF40_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIIA family hydrolase"
                     /protein_id="HDL5803607.1"
                     /translation="MLDLTKIKLVITDVDGVLTDGGMYYTDQGEVMKRFHVHDGLGVK
                     MLQSCGIKVAVLSGGDTALLRKRLEVLKIDLALLGKMEKRSACFELMQQAGVTPEQTA
                     YIGDDTLDLPAFEVCGIAIATRNALDYIKEKADWVLQKAGGEGAFREVSDQILEAQGF
                     GEIFKTADGFLTVAGKMAQ"
BASE COUNT         2517 a         2107 c         1974 g         2762 t
ORIGIN      
        1 taccttctat tgatgaaatt ttaagattat gctgctctaa catcataaaa aatgtacgct
       61 aaaaatcttc ttttcttctt ctcttttcta atactctttt gtcattttca aattcttctt
      121 tttgctcctt aaatctttta cgttccaact gcattccatg caaaacactc aataaagtaa
      181 cagcagaaaa tataccacca atatagctac caaaatgatc ccatttttca ctatctgagg
      241 ataatccccc gtgaaactga taaaaatata atcctaataa caatacaact aacagaacat
      301 accatttatt attctttata aagtcaataa cttctctaat catcaatata tcctttataa
      361 caagcggtca aaatccccaa aaactttgca aatttcaacc gcactttcgg gcgggttaaa
      421 acccgcccct acggtgatta taatacacct ttactgcttg gtagttcatt cccttcaata
      481 cgaatgcact gtctgagtgt tctgccgaag actttgaaca ggctttcgat tttgtggtgg
      541 tcgttgtcgc cttttgcctt gatgtgcagg gtggcgagca tcgtgaaggc gatggattgg
      601 aagaagtgtt cggtgagctc ggtgctgaaa tcgcccactt tgtcgcgttt gaaatccgct
      661 ttgaacttga tgaaaggtct gcctgataag tccatcgcac attccgcacg gctttcgtcc
      721 atcggcaaca cgaagccgaa acgggcgatg ccgcgtttgt cgccaatcgc ttgttttaat
      781 gcggtgccga gggcgagggc ggtgtcttcc accgtgtgat gttcgtcaat ccacaagtcg
      841 cctttggtgg tgatgttcat tctaaaaccg ccgtgggtgg caatttggtc aagcatatgg
      901 tcgaaaaagc ccacgccggt gctgatttcg ttgttgcctg tttcgtccag ccacacttgc
      961 actttgatgt cggtctcttt ggttttacgg ataacttcgg caaagcgctt tggtcgctcg
     1021 ccaatgttgg tgacggcttc gcccagtagt ttttcagcaa tcaaatccca gttcagtttt
     1081 tcagggtgat attgcaacgc ccgaatgcca aggttttccg ccagttgcac atcggtagca
     1141 cggtcgccaa tcacaaagct gttggctggg tcgaacagtt ggcggtcgat atatttttgt
     1201 agcagtttgg tgtgcggttt gcggcaatcg caaccgtctt cgggcttgtg tggacaaatc
     1261 agcacatcat caaattcaat cccttgcgag ttgaacaacg ccatcattgc attgtgcggt
     1321 ttgtcgaaat ctgcctgtgg gaacgaactc gtgcctaagc cgtcttggtt cgtaaccatc
     1381 acaaagcggt atttgccctt gagtttgagc agggcaggaa tcacgttttt ctcgaatttc
     1441 agcttttcca agctgtcgat ttgaaaatcg gtttttggct catcaattaa cgtgccgtca
     1501 cggtcgataa aaagggtggg ttgcattggt ttctcctgta tctgtatctt attcattact
     1561 ctccccacac gccaaggcat atggggttaa gcattagtga gagactttgc ctctctgtat
     1621 tcagtcccaa agggactgac ttatgcgtaa cctagtacgg ctatgccgtg ctaggctata
     1681 aatgtctctt aaaatactgc tcgttaaatt ctatctctga aattggctca gtgctgtaat
     1741 cgcctcaacc accctcaaat tctcctctct cgcccccacc gtaatccgaa tgcaattttg
     1801 caatcctaac gctttgtgtt ggtcacgcaa aataatgcct tgctcccaaa gtgctttgaa
     1861 gactttttgt ccgtcttggc atttgaatag gaggtagttg gcttcgctgt caaaaacttg
     1921 ttctacaagc ggtaagtttt ccagattttt ttgcaattcg gcacgcaggg tgatgacttc
     1981 cgccacacgg gttttcatct gctcaatgcc ttgtggggag agggcttggg cggcgatgtc
     2041 ggaaacaggc acaggcagcg gatacggggc aatcactttt tgtaacacgc cgatcagctc
     2101 agcgtttgcc aaggtaaagc cacaacgcaa acccgccaag gcaaaggctt tggatagggt
     2161 gcggataatc gccaaatgtg ggaaattcgc cagctcgctt accaagcgag cttcagggca
     2221 aaattcgatg taggcttcgt ccaccaccac aatcgctttg cctgcggtga tttgcaaaag
     2281 ttcgaacaaa tccgaccgct tgattaagtt gcctgtcggg ttgttcgggc tgcacacaaa
     2341 caccactttc acgccctcga ggttagcttt gatttgggct aaatccaact ggaaatcggc
     2401 ggttaaaggc acagttttgg tcgcaatgcc acaggtgtcg gcactcacgg cgtacattcc
     2461 gtaggttggt gggcagtaga gaatgctgtc gtttgcctcg caaaaggctc ggataatcag
     2521 ctcaatgctc tcatcgcccc cacgggaaac cagcacgttt tcaggtgcaa cgcctgcata
     2581 tcgggcgtaa ccttcaatca ccgcctgcgg ttgaggttca gggtagcggt taaaagtgcg
     2641 gtcggttaaa tcaaagtttg gcgaaagggc atattcattg gcattcagcc acacatcgcc
     2701 actacccccc aaacgccgtg ccgattggta aggggtgaga gcttgaatgt ttttacggga
     2761 aagttgtgaa attgtcatat tgtgttcctg tataatttat acatagttta gaaatttttt
     2821 cgatattgaa taataccgct atcattagct aatttattat aaagctgttg tgcttgatga
     2881 ttgtttttat ctgttaccca atatactcgg ttatatcctt tttcctgtgc atatcgataa
     2941 atatattcaa ttaattcttt tcctatgcct tggttgcgat attcagctaa aacaaataaa
     3001 tcttccaaat aacagcattc agttaaattc caagtatttg ggtgaatcac aatatgaaca
     3061 aaaccaacca ttctgttatc aacaaaagcc ccaaatccct ttacattttc actctctgaa
     3121 actttctgcc aagttgattg aataatatca tctgctaaat tcacttgata aaaatctaaa
     3181 tattgttgcc acaatagttt ccattcagtg agatttttgg aggctaacgg cgaaatatta
     3241 atactcatat tttttcctgt tatgctttta ataaaataaa gtgttcaatc agtttaatca
     3301 tcagttcttt ttgttcaggc aaactttctg ccaccaacaa ggctaagaca accagtgtat
     3361 tgactgagca aaccaatcac ctgctcaaac tcgatacctc gttcctgcaa acggcgttcg
     3421 ttaagggcat agcctttcac cagatagtct tttaggcgaa cgacttctct agcaccttca
     3481 atttgaactg ttgcattttt tgcaacagtt gcctcacgct ccagttcacc ttcttggtag
     3541 atatttcgta agtgccgaga aataacagac ttatctcgtc caaaaatatc tgccatttgc
     3601 tgtaaactta gccacaccgt ttccttatca aactgcacgg aaacttgggt tttgccgtct
     3661 tggctttggt aaatttcaat cgggtttttc atattattcc caaattttat ctataaaaaa
     3721 atctctcgaa agttgccttc cgagagatct ttattgattt gctacacttg ctcggaagag
     3781 ttatcttccg cacacaccaa atgcccgaaa gatatcaggt taaagtgtgg tggtgatgta
     3841 aagtgtagtt taaattcatt gcattactcc aaaacagtat gaacagaatt tacgtcaagc
     3901 cggcagaaat atcaagcact tttttaagca aataccggct tttttataac cgtttgttct
     3961 gcctattatg ttcttgcgga atacacctta aacttggtgg attttgccag tacgtcgtgt
     4021 ttgccgaagg ctttatcgag caaatctggg taaggcaaga atgcgtttgc gacaattcgc
     4081 agctcaccgc ctttggttag gtgattttta gcttggaaaa tcaactcctc caccgctcgg
     4141 taggcggtat cgaccccgtc gtggaatggt gggttggaga caattaaatc aaaccgttca
     4201 ttaatgtgag agaacacatc acttgctacc acttccccct ctaactgatt ttccgccaaa
     4261 gtacgtctgc cggattccaa cgccattgcg tgaatatcgc tcatcgtcag tttgattttc
     4321 ggaaattgtt gtttgagcgt tgccccaatc acgccagccc cacagcctaa atctaacact
     4381 ttgcctttta gcctgtctgc tttgtcgaag gttgaaagca ataatttggt gccgttatcc
     4441 agctccgccg agctaaaaac cgctggtaga tcgaacacat ctaagtcttg caagcggtag
     4501 gatttccaga attttttgca atcgaatgtc ggcacggtct gtagctcaaa atggtataaa
     4561 ccacaacggc gtgcagagtc gattttggca atattgccga acggttcgag cagtttttct
     4621 accgaacgaa caccagctcg gttttcgccg ataatcaaca tttcttgccc tgcttggcat
     4681 tgcgacagcc attgtagcag ttggaattgg cattcctgct tgttcttcgt ccaataaaac
     4741 accgctaact cggcactcaa accacattct aagccaaatt caacctcact atggtggcgt
     4801 gcgtaatcaa aatagctact gaataccgca accttttccg cacgagattg cagctggcgg
     4861 gcaaaatcat ctcgcacatc gccaaataat aacaccgact tgttttcaaa taacgccaaa
     4921 tggcgttcaa gtacttcgct ttctaaagag agcattttct taccttatct aaaaaattta
     4981 gcgtgaatat accgaattta agtacagaaa tcttgaattt tttgaaaaaa gtttctgttc
     5041 aagcggagtt ttgatactat ttgcaaaatt tgatgaggtt ttaaatgaat cgtcgtgatt
     5101 tactgttaca ggaaatgggt atttcgcaat gggtgctaac caatccccaa gtgctaaaag
     5161 gcgatgctca aatccgccta aacaatgcgg taaaattggt ggtagtgtgt gaggaagatc
     5221 accaacacag ccggctcttt gccgatattc tgcgtgcttt aaagttaaaa aacagcgaat
     5281 atcaatggct gactggcgaa caatcacaac gtttggtgtt tgagcattcg ccgatctttt
     5341 ggctgattca agcggaagaa caagcggtca aaatggcaaa aagttttact aatcagaccg
     5401 cttggaaaaa cgagtcttgg caagatttag ccaaatctac gaccaaacgc caactttggc
     5461 aacaaattga tactttttcg gcacaatttg gagaacagcg tgattgagca aattcaagcg
     5521 gaagatttcg agcagttatt tgaaattgag caacaagccc atttagtgcc gtggtcaaag
     5581 gggacgttat taaataatca gggtgaaaaa tacctgaatt taaaagtggt agagcaaaac
     5641 aaaattgtgg cttttgccat tagtcatatc gtgctagatg aagcaacctt atttaacatt
     5701 gcagttgctc ctgattttca aggcaaaggc attggcaagc ggttactttc cgaattaatt
     5761 ttgcaactgc aacaacggaa actcaccacc ctgtggttgg aagtgcgaga atccaaccat
     5821 tctgccagaa aactctacga ttcactcggt tttaatgaag ttaccacccg caaaaactat
     5881 taccccacgc caaacggtag caaagaaaat gcggtggtaa tggcgttata tttgtaggga
     5941 gaatttaaaa ccaaaagagc gacctcagtc gctctttttt atcagttagt gcgtgctggt
     6001 actggttgta gtacggcttg cacgtttccg gtcgttttca gttaataaac gtttacgaat
     6061 acgcaccgat tgtggtgtta cttccactaa ttcgtcatcg tcaataaact ctaacgcttg
     6121 ttctagagtg aaacgcaccg gtgtggttaa aacgatggca tcgtctttac ctgatgcacg
     6181 catattggtt aatttcttac cctgtaagca gtttacggtt aaatcgtttg aacggctgtg
     6241 aatcccgata atttgccctt catatacatc aacaccgtgg tcgatcatta attttccacg
     6301 ctcttgtaag ccaaataatg cgtatgctaa tgccttaccc gttgcgttag aaattaacac
     6361 accgttttta cgctgaccga tttcgcccgg ttttacgtca tcatagtggc tgaatgtaga
     6421 gtaaagtaaa ccagtacctg aggtcatcgt cataaattcg ttacggaaac cgattaagcc
     6481 acggcttggg atcacatact ctaaacgggt acgacctttg ccgtccggaa tcatatcacg
     6541 cacttcacct ttacggatac caagtgcttc catcactgaa ccttggtgtt gctcttcgat
     6601 atcaatcgtc acttgctcaa acggctcttg ttttttgccg tcttcttcgc ggtagattac
     6661 tttcgggcga gacactgcta actcgtaacc ttcacgacgc atattttcga ttaataccga
     6721 taagtgtaat tcgccacgac ctgacacacg gaattcgtct gggttcgaag tttcttccac
     6781 acgcaatgcc acgttgtgga ctaattcttt gtttaaacgc tcaagaattt ggcgtgaagt
     6841 cacaaattta ccttcttgac cgcagaatgg cgaggtgttt acgcagaaga acatcgttac
     6901 cgttggttca tcaacgctta atgctggtaa agcctctact gcgttaatat cacaaatagt
     6961 atctgaaata tttaattcgc ctaaaccagt aatcgcaaca atatcgccag caaaggcttc
     7021 tgttgcttca aaacgttgta aacctaaatg ccccaacacc tgaccgatac gaccttggcg
     7081 agttttgcct tcgctatcta caatcgttac cgcttggtta ggtttcaccg aaccacgttt
     7141 gatacgtcca ataccgataa cgcccacata gttgttgtag tctaattgcg aaatctgcat
     7201 ttggaatggt gcatctaatt ccacttgtgg tggttgaacg tgtttgacaa tcgcttcata
     7261 aagtggggtc atatctgccg ctaggtcttc gtgttctaag cctgctacac catttaaggc
     7321 tgaagcgtag ataattggga aatctaactg ctcatcactt gcacctaaat ttacaaacaa
     7381 gtcgaacact tgatccacca cccaatcagg gcgagcacct gggcggtcaa ctttattgat
     7441 cactacgatt ggttttaaac cgtgagcgaa cgctttttgc gtgacgaaac gggtttgcgg
     7501 catcgggcca tcaaaggcat caaccactaa cagaacagaa tctaccattg aaagtacacg
     7561 ctcaacctca ccaccgaagt cagcgtgccc tggggtatct acgatattga tgtgataacc
     7621 attccagtta attgccgtat tttttgcaag aatggtaatg ccacgctctt tttcaagatc
     7681 gttggaatcc attacacgct catcaacgtc accacgagtt tcaccaaagg tgcctgattg
     7741 ttgtaaaagt ttatcaacca aggtggtttt accgtggtca acgtgggcaa taattgcaat
     7801 gttacgcaat tttgaaatat ctacattttg cattggaata tctttaagtt aagtcaaaat
     7861 aaaaactctc gcccatcaaa actggcgaga gtcaagaaat taggaggcgt aattatacag
     7921 actttttccg ctgttggcta caaaacaagc ggtggaattt gcaaagtttt tggcgaattt
     7981 gaccgcttgt atcagcttta tgtaaaaact cagctggcta acgtctcgcc ccaaaaatcg
     8041 cagtcccaat ccgcaccatt gtcgagccac attcaatcgc cgcttgcata tcgtccgaca
     8101 tccccattga aagggtatca atgtcgtcaa attctgtttg caagcggtta aaaagtagct
     8161 gcattttgcg aaaggcaact ttttgttgct ctggctcgct ttctggtttg ggaatggcca
     8221 ttaagccccg cagtttcaaa ttcggtaatt gagaaatcgc ttgggcaagt ggtagcattt
     8281 catctggttc aatgcccgat ttcgaggctt catcgctgat attaatttga atcagcacgt
     8341 tgagcggggc tttatccgct gggcgttgtt cgtttaaacg ctcggcaatt tttaatctat
     8401 ccaccgtttg aatccaatca aaataggcag cgaccaattt ggttttattt gattgaagtg
     8461 gcccaataaa atgccattct aattcggggc gatttgcaaa aaattcgatt ttttcgaccg
     8521 cttcctgcac ataattttcg ccaaatgcac gctgccctgc ctcaatcgcc gcttgaatcg
     8581 cctcaactgg tttagttttg gagacggcta acaaacgcac gttatctcgt tgatattgtt
     8641 cggaaatttg ctgaatttgt tgatggattt gcgataaatt ctcggcaatc gacatttcgg
     8701 ttcctttggt aaacggaggt aaaaaagcta taatggtaaa atcataccat atttgaggca
     8761 aaaaaatgtt agatctcacc aagattaaat tagtgattac cgatgtggac ggcgtgctaa
     8821 ccgatggcgg aatgtactac accgaccaag gcgaagtaat gaaacgtttc cacgttcacg
     8881 atggtttagg cgttaagatg ttacaaagtt gtggcattaa agtggcagta ctctcgggcg
     8941 gcgatacggc tttgctccgc aaacggttag aggtgctgaa aattgatctc gctttgttag
     9001 gcaaaatgga aaaacgctcc gcctgctttg agctaatgca gcaagccggt gttacccctg
     9061 agcaaacggc ttacattggt gatgacacct tagatttacc ggcttttgaa gtgtgtggca
     9121 ttgcgattgc aacccgtaac gccctcgatt acatcaaaga aaaagcagat tgggtattgc
     9181 aaaaagccgg tggtgaaggg gcgtttcgtg aagtctccga ccaaattttg gaggctcaag
     9241 gattcggtga aatttttaaa accgcagatg gttttttaac ggtagcgggg aaaatggctc
     9301 agtagactct tcaagcagtt aaatttcatt ttatttttgc gatctgcatc gaaaaaatgt
//
LOCUS       DANMCL010000100         9058 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.101, whole genome shotgun sequence.
ACCESSION   DANMCL010000100 DANMCL010000000
VERSION     DANMCL010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 9058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9058
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.101"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1076)
                     /locus_tag="PXF40_002315"
     CDS             complement(<1..1076)
                     /locus_tag="PXF40_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraC family protein"
                     /protein_id="HDL5803608.1"
                     /translation="MMSFLSEVFSSFKPTKTEVISSEPNENSGESDIIQNKMSEVNNE
                     VQQLKRSGKLTQSQHHRRLYSQEPSFIDHLPWGEYLNEHGVILLDDARSVGAVFDIKP
                     IGTAGRSIEFLSRIRNLVKDALQDSFDELDVNPYVVQFYCQDSDDLQPYIEQLRNYIS
                     PIAKNSAFSEEWLRVQAKHFKDIGKPEGLFIDERVTNTAWSGRIRSTKMVIYRYVDKS
                     NDTNENLIVEQLNNACSRINGALTTAGLQLQRLDGEQFRQWLLRWFNPNPSINFEGLS
                     NNDCYHLFGKQTSNDGLPELAFNDFSEDLFYSQPKNEGNYWYFDDQPHEVVVVNNLRK
                     QPEVGLMTGEITRGRNINALFDLLP"
     gene            complement(1076..1474)
                     /locus_tag="PXF40_002316"
     CDS             complement(1076..1474)
                     /locus_tag="PXF40_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5803609.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEINNLFPRLPNPDLIMYVYPHQTRSG
                     EPLSIPGYSTVLPFYGRVQYAQPGDRTRGL"
     gene            complement(1487..2059)
                     /locus_tag="PXF40_002317"
                     /pseudo
     CDS             complement(1487..2059)
                     /locus_tag="PXF40_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
     gene            complement(2037..2543)
                     /locus_tag="PXF40_002318"
     CDS             complement(2037..2543)
                     /locus_tag="PXF40_002318"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803610.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            2563..2712
                     /locus_tag="PXF40_002319"
                     /pseudo
     CDS             2563..2712
                     /locus_tag="PXF40_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            2713..3306
                     /locus_tag="PXF40_002320"
                     /pseudo
     CDS             2713..3306
                     /locus_tag="PXF40_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(3460..4275)
                     /locus_tag="PXF40_002321"
     CDS             complement(3460..4275)
                     /locus_tag="PXF40_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL5803611.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(4611..5447)
                     /locus_tag="PXF40_002322"
     CDS             complement(4611..5447)
                     /locus_tag="PXF40_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL5803612.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(5447..6250)
                     /locus_tag="PXF40_002323"
                     /note="aph(3'')-Ib"
     CDS             complement(5447..6250)
                     /locus_tag="PXF40_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL5803613.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(6419..7264)
                     /gene="sul2"
                     /locus_tag="PXF40_002324"
     CDS             complement(6419..7264)
                     /gene="sul2"
                     /locus_tag="PXF40_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL5803614.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            7427..8719
                     /locus_tag="PXF40_002325"
     CDS             7427..8719
                     /locus_tag="PXF40_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5803615.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFYK
                     GKTETFKGFEFVDQLVAHLPPRRVQLLRRYGVYAGKVRKQWQERPNIYSLAPESWQKG
                     HPRESKIVPAIPQEKPETVQVSDAWSKLRKQSWARLLQKVYEVDPFVCPKCQGTMSVV
                     AIIEDPKELAKIINWAKQQEREQPVAVCARSPPELALV"
BASE COUNT         2287 a         2275 c         2186 g         2310 t
ORIGIN      
        1 ggcaacaagt caaataatgc attgatatta cgcccacgag taatctcgcc agtcatcaac
       61 cccacttccg gttgtttcct caaattattg actacaacaa cttcgtgcgg ttggtcatca
      121 aaataccaat agttgccttc atttttcggt tgagaataaa ataaatcttc actgaaatcg
      181 ttaaacgcta attctggaag cccgtcattt gaggtttgtt taccaaaaag atggtagcaa
      241 tcattgttgc ttaacccctc aaaattaata gaaggattgg gattaaacca acgtaacagc
      301 cattgacgaa attgttcgcc atccagtcgc tgcaattgta atccagcagt tgttagagct
      361 ccatttatgc gagaacaagc attgttcagc tgctcgacaa tcagattttc attagtgtca
      421 ttggatttat caacataccg atagatcacc attttggtac tacgtatacg accagaccaa
      481 gctgtatttg tcactcgctc atcaataaaa agcccctctg gtttaccgat atccttgaaa
      541 tgcttggctt gtacccgtaa ccattcttcg ctaaatgcac tatttttagc gataggcgag
      601 atataatttc gtagctgttc aatataaggc tgtaaatcat cgctgtcttg gcaataaaat
      661 tgaacaacgt acggatttac atccaattca tcaaagctgt cttgcaaggc atctttgaca
      721 agattacgta tccgacttaa aaattcaata ctacggccag cagtaccaat cggcttaata
      781 tcaaatactg ccccaacact acgggcatca tcaaggagta tcacaccgtg ctcattcaaa
      841 tattctcccc aaggtagatg atcgataaag gagggctctt gtgagtataa ccgacggtga
      901 tgctgtgact gggtgagttt tccactgcgt tttaattgtt gaacctcgtt atttacctca
      961 ctcattttat tttgaatgat gtcagactca cctgaatttt catttggttc acttgatata
     1021 acctctgtct tagtcggttt gaaagaggaa aatacctcac ttaaaaaaga catcatcaaa
     1081 gccctcttgt tcgatcaccc ggttgagcat attggactcg cccgtagaaa ggtaataccg
     1141 tagaatatcc tggaatacta agaggctctc cggaacgagt ttggtgtgga tacacataca
     1201 taatcagatc cggattaggt aaacgaggga acaagttatt aatttcattt tctgccgtac
     1261 gggtataggc tcgttgctca gtgttaggaa tataatcgac aggatcgagt gttcgtcctt
     1321 gttgtgaacg gtataagtgt agatcgttat tacctgctcc tttatcccaa atatctcgca
     1381 tcgtactgcc gttagcgggt aataattctt cagttgaagt tgtgcaacct gttatcaata
     1441 aggcactcat cattatgcaa tataaagctt tcattgtttg ttccttttaa tcaagttgtg
     1501 tattagttga tgtgtttccg tatttcactt tacgtccttt ggagttgtaa tcgatctcaa
     1561 tctctttctc gatatgaata gcgacacgat gtccaggtgg tacatagaca gcatcaaagt
     1621 tttcagcaaa acgctttcta aaccagtcgg cggattcttt taaaccaccg ccgatggctt
     1681 gccctaagat gaacttacct tgatcaccgg taacagctcc aacaacacta ttgccatcaa
     1741 ctactgtcgt tgtttgtgat tgtgaaaacc cttgggctgc ggcactggca gccgctaaga
     1801 agaaatttgt gcctaaatat tctggtgcat ttgtttttct ctccccggga acacaaggaa
     1861 tgcctgaact atcagataac caaccgatat tctcactatt ccctttgtta gtcgtgctga
     1921 caatacgccc atcattgaac acaaaggtca tactttttac atcgcctcgt acacaagata
     1981 gagtccagtc gccagtagct gtacccgaaa caatcgcacc ttctacatca agtaattcaa
     2041 taccattggc aatgagatgg tttagcctta gttctcaatg cttttagctg attttctagg
     2101 atattttggg cgatttgctc caatcggtcg ttaaattctc gcaaaaactc catagtctgc
     2161 cgatactgtt ctgatgacaa tagattagaa tttgcgttat tttgcgtttt aggcgtgttt
     2221 gttggtgtgg gtgctacctt actaccattt ttatttttga taggtcttgt aggctctatg
     2281 agagcgtttt cagacgtttt attagttaat ctttcgcctg attttgatat ttggcgatat
     2341 tcttggctag aattgcctga atatcctgtc cgctgttcgt tgctcgtttg gcgacttcct
     2401 gacgaaattt ctcgtccgtt gccattctct cgctcgcttt cgctgacttg ttcaaccact
     2461 cttgaaccca agagttgttt tgctcgttca tctgattttt cctgtgtctg tgattgtgtg
     2521 gattttaagg tttggtaagc caaaacttgc tcgttatacg ccaaggagga cacccggcgc
     2581 aaggtgctgg taggcgcgtg gatactcggc aaggttgaaa gcggcgagtg gccagaacag
     2641 cgcctgctcg atgggttgga tagctaccta gagcgcgacc atgatcgggc gctgttcgga
     2701 ctgccaccca aggggtcgat ttgcggccac acctttgcgg taaatgaaaa aggtatcgtt
     2761 aacacggtga ataacatccg tgcagtgtat cgtccgcagg gattaccgcg tcagatcctg
     2821 gctcgcgcct cgctgaatgc gaacaccctc gacgaggcca tcactatact taccggccag
     2881 ccgcgatccg gggcgtttca ccatacgctc gggcagctgg gcgatgcgcg gctgttcagc
     2941 gttgaggcca ccggtcaagg ctgttccgtt ctacccctga cgacggtaac cgggcatgcc
     3001 aaccatctgg tgcatgcggc actggctggc gttgagcaga tcgttaccga cagttcagcg
     3061 tcgcggcagt tacgcctcgt gcagtggcgg gaaacgcaac ctccgtttga cgccgcggcg
     3121 gcaaaaacca ttctctcaga tacccatgac gcagaactgc caatttaccg gctggctgcc
     3181 gacgatccgg atgaggagaa caccctcgcc acggcagttt tcaccctcga tgccaaccac
     3241 gtcaggtggc aaattttcga cattaaccgc gacgatgcta aatttcatgg agaagtgcgt
     3301 gggtgaaata gccggtcgtc agtcataaag ggcaggggag taccgttggc ccggcgttcg
     3361 atagtaccgt ccggatactg ccagatatcg gcgtccaggg agatgtcctg aagcgcggtg
     3421 tccggaattt caggtttgtg tctctacaaa gactaactat cagaaaaact catcgagcat
     3481 caaatgaaac tgcaatttat tcatatcagg attatcaata ccatattttt gaaaaagccg
     3541 tttctgtaat gaaggagaaa attcaccgag gcagttccat aggatggcaa gatcctggta
     3601 tcggtctgcg attccgactc gtccaacatc aatacaacct attaatttcc cctcgtcaaa
     3661 aataaggtta tcaagtgaga aatcaccatg agtgacgact gaatccggtg agaatggcaa
     3721 aagcttatgc atttctttcc agacttgttc aacaggccag ccattacgct cgtcatcaaa
     3781 atcactcgca tcaaccaaac cgttattcat tcgtgattgc gcctgagcga gacgaaatac
     3841 gcgatcgctg ttaaaaggac aattactaac aggaatcgaa tgcaaccggc gcaggaacgc
     3901 tgccagcgca tcaacaatat tttcacctga atcaggatat tcttctaata cctggaatgc
     3961 tgttttcccg gggagcgcag tggtgagtaa ccatgcatca tcaggagtac ggataaaatg
     4021 cttgatggtc ggaagaggca taaatgccgt cagccagttt agtctgacca tctcatctgt
     4081 aacatcattg gcaacgctac ctttgccatg tttcagaaac aactctggcg catcgggctt
     4141 cccatacaat cgatagattg tcgcacctga ttgcccgaca ttatcgcgag cccatttata
     4201 cccatataaa tcagcatcca ggttggaatt taatcgcggc ctcgagcaag acgtttcccg
     4261 ttgaatatgg ctcataacac cccttgtatt actgtttatg taagcagaca gttttattgt
     4321 tcatgatgat atatttttat cttgtgcaat ataacataag agattttgag acacaacgtg
     4381 gatttgttga ataaatcgaa cttttgctga gttgaaggat cagatcacgc atcttcccga
     4441 caacgcagac cgttccgtgg caaagcaaaa gttcaaaatc accaactggc ccacctacaa
     4501 taaaggggtc gtttgcggga gagggcgaaa tcctacgcta aggctttggc caacgatatt
     4561 ctccggtaag attgatgtgt tcccagggga taggataagt cgcttgatat ctagtatgac
     4621 gtctgtcgca cctgcttgat cgcggccgcg atagctagat cgcgttgctc ctcttctcca
     4681 tccgcgttcc aagctgcgga aaggcaccca taagcgtacg cctggtcgag caggcgacgc
     4741 ggatcgacgt ccagcgcacg agagaatgcg tccgccatct gtgcaatgcg tctaggatcg
     4801 agacaaaggt cgtctctgtc agccggatcg tagaacatat tggcggcgcc aaagcccact
     4861 tcaccgacca gaccgacggg atctatcacc agccagccgc gactggagaa catgatgttt
     4921 tcatgatgca gatcgccatg tagcccacgc agttccgagg cattgctcat catttgatcg
     4981 gctataatcg ccgcgtggac gtagtcagtt tgacaacctg cgttttgatc atcgcgcgcc
     5041 cgctgaaaca aagctgcaaa gcgatcccgg atcgggagaa gggcagaagg caggggttcc
     5101 tcagatgcgg catacagctt cgccatcagt tccgctgcaa tttcggtcgc ctggtagtcg
     5161 ccgtgctcgg caacgatgtg agagagcatt cgctccccgg catattcgag caacatcaga
     5221 ttgttctcac gaccgagcaa ccggactgct cccctcccat tgcgccatac cagatagtcg
     5281 gccccgcgca gttcatcagc aatgtcttct ataggtttca atcccttgac gattgcagga
     5341 gtcccgtctg gcaatgaaac tttccaaacg aggctggaaa aggtgtccgc aatgagaaca
     5401 ggttgcgaaa cgtgccaatg agcaggaaaa acaggcggca tgaacatcaa ccccaagtca
     5461 gagggtccaa tcgcagatag aaggcaaggc gttcgcggtc gggggcttcg atccccaata
     5521 cattgaatag gacagcgaag gcgcgctctg cttcatctgg cgctgcccag ttctcttcgg
     5581 cgttagcaat catgagtgcc aaatcggcat agcgatctgc tgttccgagc cgcccaaggt
     5641 cgatcagacc cgtgcattga agagttttag ggtccaccat gaagttcggc atgcagggat
     5701 caccatggca aacaaccata tcggtgcgct cttggtcgag ccgcaccggt agctctcgtt
     5761 cgacacgagc caaaagatcg agctgcggcg tactcttgtc ctcgtccggt aagaagtcgg
     5821 gattgacggc attgcgggac accacatcaa cggcgcgtcc gaacattcgc gacagcctgc
     5881 gctcaaacgg acattgatca accgataggc tgtgaacagc gccaagttgc tgccccattg
     5941 acggccacgc tttgagcaaa tccgctccag acagatcagc cgccggtact cccggaattg
     6001 ccgttatcac caagcatgca ccctcctgtt cctcctgcca gttgatcacc tcggggcaag
     6061 ccacacctcg acctttgagc caaatgaggc ggtcacgctc tccagcgagc tcaccgcggc
     6121 gggaagcagg tgcgattttc gcgaaggcat gcccgtcacc acgtcgaaaa acaaaatcac
     6181 cggattctcc gcctctgaca ggcaaccagt cagaatgcga ttcaccaaaa aaaatattag
     6241 ttcgattcaa tggaggttcc ttcagttttc tgatgaagcg cggaggtggc tttgccacga
     6301 ataccatctg tgccgaaata tttgcgcacc ataaggtcga ttatcctgtc gtcgggtcgc
     6361 cctcaaaggg gacatgcctg ctgaaccgcg aatatagaga aatatcccga atgtgcagtt
     6421 aacgaattct tgcggtttct ttcagcgccg ccaataccgc cagcccgtcg cgcaaggggc
     6481 gcggctcgtg tgtgcggatg aagtcagctc cacctgcggc ggcggcaagc tctgcagcga
     6541 gtgtcgcggc cccgacatcc cccggaccac ggcctgtgag cgcgcgcaga aaggatttgc
     6601 gcgaaacaga cagaagcacc ggcaaatcga agcgcagccg caattcatcg aaccgcgcca
     6661 gcaccgagag cgaggtttcg ggagcagccc ccagaaaaaa ccccatgccg ggatcaagga
     6721 caaggcggtt gcgtttgata ccggcacccg tcagcgccgc gatgcgcgcg tcaaagaacg
     6781 ccgcaatgtg atccatgatg tcgccagcgg gtgcctcgcg ccgatctgcc tgcccgtctt
     6841 gcaccgaatg cataacgacg agtttggcag atgatttcgc caattgcgga tagaacgcag
     6901 cgtctggaaa accgcggata tcattgagat aggccacacc acgcgacaag gcataggctt
     6961 gcgtcgcggg ttgataactg tcgagcgaga cgggaatgcc atctgccttg agcgcgtcca
     7021 gcaccggcgc gatacgcgcg atttctgtgt cggacgaaac aggcgcggcg tcgggattgc
     7081 tggatgccgg accgaggtcg atcacatctg ccccctcggc catcagctta cgcgcctgcg
     7141 caatggctgc gtctggcgcc agataccggc ctccatcgga gaaactgtcc gaggttatgt
     7201 tgacgatgcc gaaaatgatg agcgatttat ttcgagctat ttgtgattta cttgtatatt
     7261 ccattttcct ccgcgccgaa ggcgtcaacc taactttcgg ttgagctgcg aacgggcttg
     7321 tcccgtgagt ccgctcgaac cggttgttag gtggcgccag tccacatttt ccattatttt
     7381 cttcgcaatt gcaagcaaat gatcgttttc ctgcgtatgt ataggtatgg gaacttacat
     7441 tccccatcgg gaagggataa tccagaccat agtccgcaat tctctaaccc agtaccaagc
     7501 ctacgcaagt ccatcgcaaa ctatccttga ccgccttgag cattttgctg aatgtgccga
     7561 ttggaccaag ggtgttgttc gaatacgttg ccatgattgt ggacattcgt acttcaggcc
     7621 attttcgtgc aaggttttcc acctttgccc atcctgtgac caaaaacgga ccttactcta
     7681 tgctgaatac ctggccgagg atttgctcct tgatctaccg catcggcaat ttgtttttac
     7741 gattcccaag attctcagac catactttaa atcggataag cgactgtttg gcgaggtgtc
     7801 caggctggta ttctccttgc tttctgattt tttctccctg gcagccggtc aagaactact
     7861 atgtgcctgt gttgtcagct atcagtcgtt tggtgaattc gctcgattcc acccgcactg
     7921 gcatgttctg gttctggaag gtgggttcac caagtacgac cgctttgtat atttaccaat
     7981 tggagccgac gaagggatgc tcaaggtctg gcaagcagcg attatggctt tgtttctgcg
     8041 aaaggaacta atagatcaag cccgagtgaa catgctcaga gactggaagc attccggctt
     8101 tagcatcgag agcgaaacca gactattcaa caaggccgat cgagaagccc tcggccagta
     8161 tgtcgttcgc ggcgctacct gtgcagaaaa aattcagtat gatccagctt ccgacacgat
     8221 aatctggaca gctagcccaa agggattcta caaaggaaaa acagagacct tcaaaggctt
     8281 tgaattcgtc gaccagcttg tggcccattt accaccaagg cgggttcaat tgcttcgtcg
     8341 ctatggcgta tatgcgggca aagtccgcaa gcagtggcaa gagcgcccca atatttatag
     8401 cctggcccca gaaagttggc aaaaaggtca tccacgcgaa tccaaaattg ttccagccat
     8461 acctcaggag aaaccggaaa ctgtccaagt ttccgatgcc tggtccaagt tgcgcaaaca
     8521 aagttgggca cggttgttac agaaagtcta tgaagttgac ccgtttgttt gcccaaaatg
     8581 ccagggaaca atgtcggttg tggcgataat cgaggatccc aaggagcttg ccaagattat
     8641 taactgggca aagcagcagg aacgggagca gccagtggcc gtctgtgctc gttcacctcc
     8701 tgagcttgct ttggtgtagg tataataccc aaaaacgaag tttatgcgga acaggataac
     8761 acctcgaaat cggagtttat atggcttcgt gggggagtta tgtgtttgag ctttgtcgca
     8821 ttaacgcgaa tcaggggttg acggcagaaa tagactggaa ttacacttct tggagtcggc
     8881 gttgccggaa aattctgatt ggattagttg ttcggggtgc gaaaacagtc gtagttcggg
     8941 gaaaaaaccg aattttgacc cgaaaccgca aaaaacccga aatgacagtt cctataattt
     9001 atttatttgg gggcgtgcac ctgtagcctt agcgacttta aatgacagtt cctataat
//
LOCUS       DANMCL010000101         8957 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.102, whole genome shotgun sequence.
ACCESSION   DANMCL010000101 DANMCL010000000
VERSION     DANMCL010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8957
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.102"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..641)
                     /locus_tag="PXF40_002326"
     CDS             complement(<1..641)
                     /locus_tag="PXF40_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803616.1"
                     /translation="MITSNLERSFHGLNIAQHNYKIFLDESGGNIGKLKHTPNDKKGS
                     NFNRTISSHIGVPPVFVLGGIAQISNANLIAPDWRKLLHLQNKELKFSKIGKNFFNKL
                     GSKELRKVLEWINENNLCIHFALYDWVYFYDVDIIDSALIESDVCSVWKYLSEKIGNS
                     NRYKEIKDYQRKVGLDKQSDDIIYLFYIKELLHDFIINNLQWFLSEIYNNHYK"
     gene            complement(668..1342)
                     /gene="cas4"
                     /locus_tag="PXF40_002327"
     CDS             complement(668..1342)
                     /gene="cas4"
                     /locus_tag="PXF40_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HDL5803617.1"
                     /translation="MGDLQNSAEILPLVQPKFGDDKRSISLSALQHYAFCPRQCALIH
                     NEQVWAENYLTAQGQALHERVDSGEPEVRKGIRFERTVHVAAEKLGISGILDLVERDL
                     KTGELKPVEYKRGKPKLDPIDEIQLCAQALCLEEMTEQTINEGALWYMQTRHRLPIIF
                     STELRTKTLATIAEVRSLLDSGTTPPPEYSKRCKACSLIDLCQPKLLERDRSKGYVVG
                     VFGSLL"
     gene            complement(1342..2205)
                     /gene="cas7c"
                     /locus_tag="PXF40_002328"
     CDS             complement(1342..2205)
                     /gene="cas7c"
                     /locus_tag="PXF40_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
                     /protein_id="HDL5803618.1"
                     /translation="MSIQNRYEFVFFFDVTNGNPNGDPDAGNMPRLDPETSKGLVTDV
                     CLKRKIRNFIEMSYENEAGYEIYVKEKSVLNLQNKRAYEALGIESEAKKLPKEEAKAR
                     EITAWMCKNFFDIRTFGAVMTTEVNSGQVRGPVQLAFAQSIDPIIPLEVSITRMAVTN
                     EKDLEKERTMGRKYIVPYALYRVHGFISAKLAEKTGFSDEDVQKLWQALQLMFEHDRS
                     AARGEMAARKLIVFKHDSELGNQPAHKLFDSVKVERINGEKDTPAKDYDDYCISVQTE
                     GLTGVTVEELL"
     gene            complement(2215..3996)
                     /gene="cas8c"
                     /locus_tag="PXF40_002329"
     CDS             complement(2215..3996)
                     /gene="cas8c"
                     /locus_tag="PXF40_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
                     /protein_id="HDL5803619.1"
                     /translation="MITALTRYYYRLAAQEDRLTGEAKVPSYGFSEEKIGWVLELDSK
                     GNLVNVISNLTEDKKPKPKLMSVPRPEKRTSGIKPNFLWDKTAYVLGIESNPDKATAK
                     DQPINFAEKTFEAFKQYHLDLLADSNDEGLMAIRNFLQQWQPTHFAESICPREILDAN
                     VVFKLVGTSGYIHQREAAQTLWTSLLINQSDNAEKGLCLISGKLSPIQRTHPPIKGVF
                     GGQSSGGSIISFNKESFTSFGKEQGSNAPVSEQAAFAYTTALNYLLRTEKHRLTIGDA
                     STVFWAEADNTTQAEAAEGFFAALMTPPDDEQENQKIFEELQKISKGRPLAEISPELS
                     ENTRFYVLGLAPNAARISVRFWLDTTFGQLAKNLSEHWQDLALEPCPWKTPPSIWRLL
                     LQTASLGKSENISPVLAGEMARAVISGHLYPMSLLSQLVTRIRADGDINGLRVALMKA
                     VLQRKFRKGFIKEGVPMSLNKESDNQAYLLGRLFAVLERIQSQALGELNAGIADRYYG
                     SASAVPFSVFPRLLSGAKHHLSRLRKDKGGMAVNLDKDLGEIIASLPENFPRHLSIDE
                     QGRFAIGYYHQKQSYFAKKETTESIEN"
     gene            complement(4018..4695)
                     /gene="cas5c"
                     /locus_tag="PXF40_002330"
     CDS             complement(4018..4695)
                     /gene="cas5c"
                     /locus_tag="PXF40_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
                     /protein_id="HDL5803620.1"
                     /translation="MPNKIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVH
                     WKPAIRWVIDKIYVLQPIQFESVRRNELGSKISASKISGAMKRKTVADLYTVIEDDRQ
                     QRAATVLKNVGYVIEAHAVLTKMAGEAETVTKHIEMFKRRAKKGQCFQQPCMGVREFA
                     ANFALIDDDEPLPECFLAENERDRDLGWMLHDIDFEHGNQPRFFRAEMKNGVIDVPPF
                     YAEEVKS"
     gene            complement(4937..6688)
                     /locus_tag="PXF40_002331"
                     /pseudo
     CDS             complement(4937..6688)
                     /locus_tag="PXF40_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250669.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF87 domain-containing protein"
     gene            complement(6678..7139)
                     /locus_tag="PXF40_002332"
     CDS             complement(6678..7139)
                     /locus_tag="PXF40_002332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803621.1"
                     /translation="MFKPHGSLDWFMAGDVPMTSCIGKVEEPLIITPGVGKYKKGYGQ
                     PFDAHREKANEAIDSASSILCIGYGFNDDHLQTHLTGKIKSGVKTLLLTRGLSENARN
                     VVKEAPNCKALIFDGDKAGTRVVSKQEETFIPNVHWWDVEFFVKEILENGK"
     gene            complement(7298..8434)
                     /locus_tag="PXF40_002333"
     CDS             complement(7298..8434)
                     /locus_tag="PXF40_002333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5803622.1"
                     /translation="MLLRKAFKFEIRPNGEQVRKMKQFCGCSRFVFNKALAWQNEQYE
                     QDNHHKFSYTKLANLLPQWKKELVWLKDCHSQVLQQSLKDLESAFKNFFQKRADLPKF
                     KKKGVKESFRFPQGCKIEQKNDRLYLPKIGWVRYRNSREIVGEVKNVTVSMKCGRFFV
                     SIQTEFKQEIPTHKGGEIGIDMGIARFATLSNGEFFEPLNAFKTHKGKLAKLQKQLKN
                     KVKFSKNWQKLKDKIGKLHHKIANCRKDFLHKISTQISKNHAMIYVEDLQVANMSKSA
                     KGTAEVHGKNVKQKSGLNRVILDQSWFEFRRQLDYKTQWLGGFLLAVPPQNTSRTCPC
                     CNYTAKENRQTQENFECVECGYTENADVVGAMNVLTRGQAIVQA"
     gene            8481..8897
                     /gene="tnpA"
                     /locus_tag="PXF40_002334"
     CDS             8481..8897
                     /gene="tnpA"
                     /locus_tag="PXF40_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HDL5803623.1"
                     /translation="MKKETEIRRGRHVVFNLHVHLVFVTKYRREVFTQAILNDLHSIF
                     ATICADFEATLVEFDGEDDHVHLLVEYPPKVAISHLVNSLKGVSSRMIRKKNYPSIRK
                     KLWGNQLWSPSYFAGSCGGAPISIIRQYIEQQQTPD"
BASE COUNT         2484 a         1993 c         1655 g         2825 t
ORIGIN      
        1 ttcttgtaat gattattata aatttctgat aaaaaccatt gtaaattatt aataataaaa
       61 tcatgtaata attcttttat ataaaaaaga taaataatat catccgattg cttatctaat
      121 cctacctttc tttgatagtc ttttatttct ttatatcgat tagaattacc aattttttct
      181 gaaagatatt tccaaacact acatacatca ctttctatta aagcactatc tataatatct
      241 acatcgtaga aatacaccca atcatacaaa gcaaaatgta tacataggtt attttcatta
      301 atccattcca agacttttct taattctttt gaaccaagtt tattaaaaaa attctttcct
      361 attttactaa actttaattc cttattctgc aaatgaagga gttttctcca atcaggagca
      421 attaaattag cattactaat ttgagcaatc cctcctaata caaatacagg aggaacccca
      481 atgtgggaag aaatggttct attaaaatta ctaccttttt tatcattagg cgtatgtttt
      541 aacttcccaa tatttccacc actctcatca agaaatattt tgtagttatg ctgtgctata
      601 tttaatccgt gaaatgatct ttctaagttt gaagttatca caacaagtcc ctccccaaag
      661 taggtaatta taataaagat ccaaacactc ccaccacata ccccttcgat ctatcccttt
      721 ccaacaactt tggttggcag aggtcgataa gcgagcaggc tttgcagcgt ttgctgtatt
      781 ctggaggagg tgtggttccg ctatctaaga gcgaccgcac ttcggcaatg gtggcgaggg
      841 ttttggtgcg tagttcggtg gaaaaaatga tcggcaaacg gtggcgagtt tgcatatacc
      901 acaacgcccc ttcgttaatc gtctgctctg tcatttcttc caaacataag gcttgggcac
      961 agagttggat ttcatcaatc ggatcaagtt tgggcttgcc acgtttgtat tccactggtt
     1021 ttagctcgcc tgtttttagg tctcgctcaa ccaaatccaa aatgccgctt atgcctaatt
     1081 tttcggctgc aacgtgaacc gttcgctcaa agcgaatccc tttgcgaact tctggctcac
     1141 cactatctac ccgctcgtgc aacgcttgac cttgtgcggt gagatagttt tctgcccaca
     1201 cctgttcgtt gtggatcagc gcacattgac gtgggcagaa ggcatagtgt tgcaaagcgg
     1261 aaagcgaaat tgaccgcttg tcatcgccaa attttggctg aacaagcggt aaaatttccg
     1321 cagaattttg caaatcgccc attacagtaa ttcttcaacg gttacacccg ttaagccttc
     1381 ggtttgtacg ctgatacagt aatcgtcata gtctttcgct ggcgtgtctt tttcaccgtt
     1441 gattcgctca acttttaccg agtcaaacag tttgtgtgca ggttggttgc ctaattcgct
     1501 gtcgtgttta aatacgatca gtttacgagc tgccatttcg cctcgtgcgg cagaacggtc
     1561 gtgttcaaac ataagttgca aggcttgcca aagtttttgt acatcttcat cagaaaagcc
     1621 cgttttttca gcgagtttag ctgaaataaa gccgtgaaca cgataaagtg cgtaaggcac
     1681 gatatattta cgccccatag tccgttcttt ttcaagatct ttttcgttgg tcactgccat
     1741 tcgtgtgatc gatacttcta gcggaataat cggatcgata gattgagcga acgccaattg
     1801 cactgggcct cgcacctgtc cgctgtttac ttcggtagtc attaccgccc caaaggtgcg
     1861 aatatcgaaa aagtttttgc acatccaagc ggtaatttct cgggctttag cttcctcttt
     1921 tggtagtttt ttcgcttccg attcaatccc taatgcttca taagcacgtt tgttttgtaa
     1981 attcagaaca cttttttctt taacataaat ttcgtaaccc gcctcgtttt catagctcat
     2041 ttcaataaaa ttgcggattt tgcgttttag gcaaacatcg gtgactaaac ctttactggt
     2101 ttcaggatca aggcgtggca tatttcctgc atctggatca ccatttgggt taccgttggt
     2161 tacatcaaag aaaaaaacaa attcatagcg gttttgaata gacatagtgt ttccttagtt
     2221 ttcaatagac tcagtggttt cttttttagc gaaatagctt tgtttttggt ggtaataacc
     2281 aatcgcaaaa cgcccttgtt catcgatact taaatggcga gggaaatttt ccggcaagct
     2341 ggcaataatc tcacctaaat ccttatccag attaaccgcc attccgccct tatcttttct
     2401 caagcgagat aaatggtgtt ttgcaccgct taataagcga gggaataccg aaaacggcac
     2461 ggcagaagcc gaaccataat agcggtcggc aatgccggca tttaattcgc ctaatgcttg
     2521 gctttggatt ctttctaata ctgcaaataa cctgccgagc aagtaagctt ggttatcgct
     2581 ttctttattt aagctcatag gaactccttc tttaataaaa ccttttctaa attttcgttg
     2641 taagactgct ttcatcaacg ctactcgcaa accgttaata tcgccgtctg ctcggattcg
     2701 agtcactaac tgtgaaagta aactcatcgg atataaatga ccgctaataa ctgcgcgagc
     2761 catttcaccc gccaagactg gagaaatatt ctcactttta cctaatgaag cggtttgtaa
     2821 taatagtcgc caaatggaag gtggtgtttt ccatgggcaa ggctcaagag cgagatcttg
     2881 ccaatgctcg ctgaggtttt ttgccagttg cccaaaggtg gtatccagcc aaaaacgtac
     2941 cgaaatgcga gctgcatttg gagcaagccc caacacataa aaacgggtgt tttcagataa
     3001 ttctggggaa atttctgcaa gcggtcgtcc tttgctgatt ttttgcaatt cttcaaagat
     3061 tttttggttt tcttgctcat catctggagg cgtcattaaa gcagcaaaaa agccttcagc
     3121 agcttcagct tgggtggtat tgtctgcttc tgcccaaaag acagtgctgg catcaccaat
     3181 agttaaacga tgtttctcgg tgcgtaacaa ataatttaaa gcagtagtgt aggcaaaggc
     3241 ggcttgttca gaaacagggg cattactacc ttgttccttg ccaaatgaag tgaaggattc
     3301 tttattgaaa gagatgattg aaccaccgga actttgccca ccaaataccc ctttaatagg
     3361 aggatgagtt cgttgaattg gcgataattt gcctgaaatt aagcataaac ctttttcagc
     3421 attatcactt tgatttatca acaaacttgt ccaaagggtt tgtgcagctt ctcgctgatg
     3481 aatataaccg cttgtgccga ctaatttaaa cacgacattc gcatcaagaa tttctcttgg
     3541 gcagattgat tcggcaaaat gtgtgggttg ccattgttgc aggaaatttc ttatcgccat
     3601 taaaccttca tcattggaat ctgcaagcaa atccaaatgg tactgtttaa atgcctcaaa
     3661 ggttttctcg gcgaaattga tgggttgatc tttggcggtg gctttatcag gattactttc
     3721 aatgcctagc acataagcgg ttttatccca cagaaaattg ggcttaatgc cagacgtgcg
     3781 tttttcaggg cgaggtacgc tcatcaattt cggttttggt ttcttatctt ctgttaaatt
     3841 tgagatcaca ttgaccaaat ttccctttga atctaattct agtacccaac cgattttttc
     3901 ttcactgaaa ccataagaag gcactttagc ttcgcctgtt aagcgatctt cttgtgctgc
     3961 aaggcggtaa taatagcgag ttaaggcggt aataatagcg agttaaggcg gagagaatca
     4021 tgatttgacc tcctctgcat aaaatggtgg cacatcaatc acgccatttt tcatttccgc
     4081 acggaagaaa cgaggttgat taccgtgctc aaaatcaatg tcgtgcaaca tccagcctaa
     4141 atcccgatct cgctcatttt ctgccaaaaa acactcaggt aacggttcat cgtcatcaat
     4201 caaggcaaaa tttgcggcaa attcacgcac gcccatacaa ggctgctgga aacattgccc
     4261 ctttttcgca cggcgtttaa acatttcaat atgcttggtg acggtttccg cctcgcctgc
     4321 cattttggtc agcactgcgt gagcttcgat cacataaccg acatttttca gcacagtagc
     4381 agcacgttgt tggcggtcgt cttcaatcac agtatataaa tccgccactg ttttacgctt
     4441 cattgcacca ctgattttac tggcagaaat tttactgcct aactcattac ggcgaacaga
     4501 ctcaaattga atcggttgta atacataaat tttatcaatc acccagcgaa ttgccggctt
     4561 ccaatgcacc gcagccaaaa tcccccgtgc cgcagacggc gtaatcacat cataagacac
     4621 ccgttctacc ttcatttcag gacgggtaaa acaagcataa tcaccccaaa tatggagcct
     4681 gattttgttt ggcataatag aatgctcctt ttaattatgt aacacacacc tccccgaagg
     4741 gaggtgaaat ttctttagct tatattataa ctgctttggt ttcaacccac gcactcagta
     4801 aaatgcgaaa aattttatgg cttattatat taagcggtcg gatttactta gaaagttgca
     4861 aagttatttg agtatttaac cgcttgtatt tcaaaaatag tcagaaaaat aacagcattc
     4921 taggtacaat atttttctaa gaacgaactt gtctccgcaa tgcctctact gcgtttgaca
     4981 cagcatttgg tttgggctcc tggtttgccc aatcagacca gaattggcgt gtagcacttt
     5041 ctggggctat atgcggttta gcaagtttga ttcgtgtagg taatagaatc gaatcgccta
     5101 gcaataacgc ttcgcctaaa tcaagtaacg gcaatatatc agtaattcca accatagatt
     5161 ccggcaataa acgctttaca acactttgat cttgaccatt tgttaatcgt aaaaccaaga
     5221 aattattaca ttgactcaaa attgttcggc ttacatctga aggacgttgg ctaacgacca
     5281 acaaagacac gccatatttt ctaccttctt tcgcaatccg ctcaaaggct tccaatgcgc
     5341 gtttttccgc tgcttccgct gaatctcgaa cagggagata taaatgtgct tcatcgcaaa
     5401 taatcgttag tggatggcgg gaatctttat ccatccaaaa ttgaatgttg tataaaaggc
     5461 gggcaagaac tcccgtaaca atcggtaaaa catccgacgg gacttccgaa aaatcaataa
     5521 tttttatccc tttttcgctc tcagaagcag aaaacagttt tgacaacata ttttccagcc
     5581 acccatagct gttgcactct actggcggtt ggaacataaa accgcaacgt ctgtcatcta
     5641 ttttggcttt catccttccc ataaacctag acaacttact ataccaagga ccttgctttg
     5701 ttcctgaacc tccctcttta ggtaccatct cagaattatc tttatctaaa cgagctaaca
     5761 ataattcaat agaatacgga attggcgaat caacagtaaa cgtttccaaa acatcatttc
     5821 tttcttcctt attcaatgtt tgctctttta atgcgcgaac atgctcagta aaacgcgccg
     5881 cctgattcgg agcattatca tcactgcgat ctaaaattaa agccagcatt tattcccgat
     5941 tgagcagcca atagggaata aataaactgc gttcatctga accatccaaa tctcccggtc
     6001 cagcaatacg gtattgctga gcgatagcgt ttttaccttc gcatagagtg ctatattcac
     6061 cgtgcatatc gaatacaata agattagcag cttttaaagc tgctgcacgt tccaatatta
     6121 atgcaactga ccagctttta ccggaaccag tactacccaa aatagcagcg tgccgttgaa
     6181 agaatttatc tccgtttgct atagctacag ccgtttcatc agccataaaa tgacctaaag
     6241 tcagccgttc attttctttt acgttagcgg acaaaagatt cataaataat tgcagattgc
     6301 tgccactaat atgaaagcaa tctctatcaa tttgcggaaa acaatccgct ccccgcttaa
     6361 aagtgttgct caaactacca tcaacagctt tataagtacc gattaatact gccttgataa
     6421 agtcatcctg actttcaccc agaggaattt caccctcatt agatatttct tctagcagca
     6481 atttttcact gatagaacgc gttacccgtt cgataatgcc gataaggtac tcactagccg
     6541 ttctgccttg aatcgcaatc agattaccca cagcaatact agtcatttgt tgatgctctt
     6601 caacagaaat caatacacgg ctggtatcta ctgttacaac cctgcccaaa cgggcattgt
     6661 ctttaaaatt caatgtttca tttgccattc tctaaaatct cttttacaaa aaactcaacg
     6721 tcccaccaat gaacattagg aataaaagtt tcttcttgct tgctaaccac ccttgttcca
     6781 gccttatctc catcaaaaat cagagcctta caattcggag cttccttcac cacgtttctg
     6841 gcattttctg aaagtcctct tgtcagaagt agtgttttca caccactttt aattttgcct
     6901 gtcaaatgtg tttgaaggtg gtcatcatta aaaccatagc cgatacataa aattgaagaa
     6961 gcagaatcaa tagcttcatt tgctttttct cgatgagcat caaatggttg tccatagcct
     7021 tttttatact tcccaacacc aggcgtaata attaaaggct cttccacttt acctatacaa
     7081 cttgtcattg gaacgtctcc agccataaac caatctaaac taccatgcgg tttaaagatt
     7141 ttgatatgat ctcgttgaca tcctcccctg cctaaaggca ggggattcct actagctccc
     7201 acagcaagct gtgggctact ctcggtgggt ttctactgct gatctctatt gagattcact
     7261 tcatagacgc ttcgggtatg tcctaccctg atatttatta tgcttggact attgcttgcc
     7321 cacgtgtaag aacattcatt gctcccacta catcggcatt ttccgtatag ccacattcta
     7381 cgcattcaaa attttcctgt gtttggcgat tttcttttgc tgtatagttg caacaagggc
     7441 aagtacgact ggtattttgt ggaggaactg ctagcaaaaa tccgcctaac cattgcgttt
     7501 tgtagtccag ttgtcgtcta aattcaaacc aagactggtc taatatcact cggtttaagc
     7561 ctgatttctg tttcacattt ttgccgtgta cttccgctgt gcctttggct gatttggaca
     7621 tattcgccac ttgcaaatct tcaacataga tcatcgcgtg gtttttgctg atttgcgttg
     7681 agattttatg caggaaatct tttcggcagt tggcgatttt gtgatgtaac ttgccgattt
     7741 tatctttcag tttttgccag tttttactga acttcacttt attttttagc tgtttttgca
     7801 gttttgccaa ttttcctttg tgggttttaa acgcatttaa cggctcaaaa aattctccat
     7861 tggaaagggt tgcaaaacga gcaatgccca tatcaatgcc gatttctccg cctttatgcg
     7921 tgggaatttc ctgtttaaat tccgtttgaa tgctcacaaa aaagcgtccg catttcattg
     7981 aaacggtgac attttttact tccccaacaa tttcacgact gttgcgataa cgcacccaac
     8041 cgattttcgg cagatacaag cggtcgtttt tctgctcgat tttgcaacct tgcggaaaac
     8101 ggaaactctc ttttacgcct tttttcttga atttgggcaa atccgcacgc ttttgaaaga
     8161 agtttttaaa cgcactttca aggtctttta acgactgttg aagcacttgt gaatggcaat
     8221 ctttaagcca taccaattct tttttccatt gcggaagcaa gttggcgagc ttggtataac
     8281 tgaatttgtg atggttatct tgttcgtact gctcattttg ccacgccaat gccttgttaa
     8341 acacaaagcg agaacagccg caaaactgct tcattttgcg aacttgttcc ccatttggtc
     8401 tgatttcaaa tttaaaggct ttacgtagta acattgcacg aattagaata caaaaattgt
     8461 gcttattcta cacttggcct atgaaaaaag aaacagagat tagacgtggt cgccacgttg
     8521 tttttaactt acacgttcat ttagttttcg tgactaaata tcgcagggaa gtttttactc
     8581 aagcaatttt gaacgactta cactcaattt ttgcaacgat ttgtgctgat tttgaagcca
     8641 cattagtgga atttgatggt gaagatgatc acgttcatct acttgtggaa tatccgccta
     8701 aagtcgctat ttctcatctt gtaaacagtt taaaaggcgt ttcgagccga atgattagaa
     8761 agaaaaacta tccgagcatt cgcaaaaaat tatggggaaa tcaactttgg tcaccgtctt
     8821 actttgctgg tagttgtggt ggtgcaccaa tatcgattat tcgccaatat atcgagcaac
     8881 aacaaacacc tgattagtta gaaatttgaa acggctttgc cgtttatacc ttatatccac
     8941 gccctaaagg acgtggt
//
LOCUS       DANMCL010000102         8878 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.103, whole genome shotgun sequence.
ACCESSION   DANMCL010000102 DANMCL010000000
VERSION     DANMCL010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8878
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.103"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            11..1024
                     /gene="cas1c"
                     /locus_tag="PXF40_002335"
     CDS             11..1024
                     /gene="cas1c"
                     /locus_tag="PXF40_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated endonuclease Cas1"
                     /protein_id="HDL5803624.1"
                     /translation="MRKLQNTLYITTQGSYLHKERETLVVEQDRKKVAQLPIHSIGHI
                     FCFGNVLVSPFLMGFCGENNVNLAFFTENGRYLGRLQGRQSGNVLLRRAQYKKSETNP
                     VPVARNIIAAKIQASKRVLQRQIRNHGENADLQSTITALNYSLQQLKTADNLDLIRGI
                     EGDAAARYFGVFSHLIKENSGFHFDGRNRRPPRDGVNALLSFLYSIVGKDISGALQGV
                     GLDPQIGFLHADRSGRDSLAQDILEEFRAWWVDRMVLSLINRGQVKPDDFVTEASGAV
                     TLKPEARKLLFQTLQAKKQEKIIHPFLEEEVEIGLLPYIQAMLLARHLRGDLAEYPPF
                     LMR"
     gene            1091..1384
                     /gene="cas2"
                     /locus_tag="PXF40_002336"
     CDS             1091..1384
                     /gene="cas2"
                     /locus_tag="PXF40_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005540845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HDL5803625.1"
                     /translation="MLMLITYDISFDDPEGQARLRRIAKHCLDYGVRAQYSVFECDVT
                     PAQWVTLKNKLLATYNPDCDSLRFYHLGSKWRNKVEHHGAKPSVDIFKDTLIL"
     repeat_region   1576..2545
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=1576..1595
                     /rpt_unit_seq="cagccacctacgcgtggctg"
     gene            2795..4270
                     /gene="rng"
                     /locus_tag="PXF40_002337"
     CDS             2795..4270
                     /gene="rng"
                     /locus_tag="PXF40_002337"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005610087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HDL5803626.1"
                     /translation="MSSTELLVNVTPSETRVALVENGILKELHIEREAKRGIVGNIYK
                     GRVTRVLPGMQSAFVDIGLEKAAFLHASDIVSHTECVDENEKKQFLVKDISELVREGQ
                     DIVVQVVKDPIGTKGARLTTDITLPSRYLVFMPENSHVGVSQRIESEEERARLKSLVE
                     PYCDELGGFIVRTAAEEATEESLKQDVEFLKRLWRKVLERKGKYSAKSMLYGELALAQ
                     RVLRDFIGTHINSVRIDSKLTYEQVREFLAEFMPELTDCVTLYTGQQTLFDAYGVEKA
                     IQKALDKRVDLKSGGYLIIEQTEAMTTIDINTGAFVGHRNLAHTIFNTNIEAIQAIAH
                     QLQLRNLGGIIIIDFIDMQEEEHRERVLQSLQEALKGDRVKTNVNGFTQLGLVEMTRK
                     RTRESLERILCCDCQACQGRGTVKTVETVCYEIMREIVRVHHLFKTENIHVYAAKDVA
                     EYLINEESHALLAELQAFIGKKIEIKLEPYYHQEQFDVVVM"
     gene            4424..5926
                     /gene="lysS"
                     /locus_tag="PXF40_002338"
     CDS             4424..5926
                     /gene="lysS"
                     /locus_tag="PXF40_002338"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012054447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HDL5803627.1"
                     /translation="MSEVENQELDLNGEMLARREKLNKIREQGNAFPNTFRRDALAKD
                     LHAQYDAVEGETLKEQNIQVKVAGRIMLKRVMGKASFFTIQDVSGAIQLYVARDNLSD
                     SVYEEKVSLWDLGDIVGVEGALFKTKTGELTVRCSEVQLLTKSLRPLPDKHHGLTDLE
                     TRYRQRYLDLISNEESRRTFMIRSQVVSGIRKFFLERDFIEVETPMLQVIPGGAAAKP
                     FITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSVRHNPEFTMIEY
                     YQAYADYHDLMDNTEELLRQLALDILGTTDVPYGDYVFDFGKPFERITMHDAIVKYGN
                     GIQREDLDSFEKSVEIAKGLGIEIQKSWGLGSVVNAIFEEVAEHQLIQPTFLMAHPAE
                     ISPLARRNDENPEVTDRFELFIGGREIGNGFSELNDAEDQAERFDAQVAAKDAGDDEA
                     MFKDEDFIVALEHGLPPTAGEGLGIDRLVMIFANAPSIRDVILFPAMRQK"
     gene            complement(6004..7077)
                     /locus_tag="PXF40_002339"
     CDS             complement(6004..7077)
                     /locus_tag="PXF40_002339"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HDL5803628.1"
                     /translation="MAQQITLFEDVPLPLTLGGELSPITVAYQTYGRLNAEKSNAVLL
                     CHALTGDAKPYYDSPTEKGWWQDFIGKGLAFDTDKYFFICSNVLGGCKGTTGPASINP
                     KTNKPYGSLFPIITVQDIVNVQKALLDYLEIPQLHAVVGGSFGGMQATQWGISYPDKV
                     RNIINLCSSLTLSAEAIGFNHVMRQAIINDPHFNGGNYYDGIAPDNGLKIARMLGMLT
                     YRTDIQLAKAFGRETKQQGQIWGDHFQVESYLSYQGTKFLGRFDANTYLRLLRALDLY
                     DPALGYENEETALKRIKANYTFVAVTSDQLFKQVDVYKSKQKLEQAGVNLEFHEFHSD
                     FGHDAFLVDYDFFEPMIKAGLAK"
     gene            7345..8028
                     /locus_tag="PXF40_002340"
     CDS             7345..8028
                     /locus_tag="PXF40_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HDL5803629.1"
                     /translation="MNQTRDRLEKLPLFHKMQQFIIKALKIIAIFPLLGIAILLVVDS
                     LTSYIVRDKIYTDSKQIPYREYAVVLGTAKFYSKDVINQYYKYRLEAAKQLVQEGKVN
                     QLLLSGDNKTPYYNEPKTMTSDLLKMGIATSKIKQDYAGYTTFYSIIRAKKVYKLPPF
                     TIISQKFHCERALFIAKFRDIDAICYAATYPEGAYQVRMREILARSAMVFSLLIGKEP
                     ESLEDIRSK"
     gene            complement(8065..>8878)
                     /gene="purU"
                     /locus_tag="PXF40_002341"
     CDS             complement(8065..>8878)
                     /gene="purU"
                     /locus_tag="PXF40_002341"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005641775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HDL5803630.1"
                     /translation="TECPDDTGLVAKITNICYKHQLNIIKNSEFVENETKRFFMRTEL
                     NGIFNDETLLTDLKFTLPEGSSYKLLPKQRKRIVILVTKEAHCLGDLLMKNYYGGLDV
                     EIAAVIGNHETLKSLVERFDIPFHLVSHENLTRVEHDKLLAEKIDEYSPDYIVLAKYM
                     RVLNPEFVARYPNRVVNIHHSFLPAFIGAKPYHRAYERGVKIIGATAHFVNDELDEGP
                     IIMQNVINVDHTYTAEAMMRAGRDVEKTVLSQALELVLADKVFVYKNKTIIL"
BASE COUNT         2657 a         1615 c         1961 g         2645 t
ORIGIN      
        1 attttcaacc atgcgcaaac tacaaaacac cctctacatt accacccaag gtagctattt
       61 gcacaaagag cgagaaacct tggtggtgga gcaagatcgg aagaaagtgg cacagttgcc
      121 gattcattcc attgggcata ttttttgttt tggcaatgtg ttagtgtcgc cgtttttaat
      181 gggattttgt ggcgaaaata acgtaaattt agcgtttttt accgaaaatg ggcgttatct
      241 tgggcggttg caggggcggc aaagtggtaa tgtattgtta cgccgagccc agtataaaaa
      301 gtcggagacc aaccctgttc ctgtggctcg caacatcatt gcagccaaaa ttcaagcatc
      361 taagcgggtg ttacaacggc aaattcgtaa tcacggcgaa aatgctgacc ttcaatcgac
      421 aattaccgca ttaaattaca gcctgcaaca gttgaaaaca gcagacaatt tggatttgat
      481 tcgtggcatt gagggcgatg ctgcggctcg ttattttggg gtgttttctc atcttatcaa
      541 agaaaatagc ggtttccact ttgacggacg taatcgccgc ccacctcgtg acggtgtgaa
      601 tgcgttgctt tcatttcttt atagcattgt agggaaagat attagcgggg cattgcaagg
      661 cgtggggctt gatccccaga ttggcttttt gcatgcagat cgttcggggc gagatagctt
      721 agctcaagat attttggagg aatttcgagc gtggtgggtg gacagaatgg tgctgtcgct
      781 gatcaatcga gggcaggtta agcctgatga ttttgtgacg gaagccagtg gtgcggtaac
      841 gctcaagcct gaagccagaa aattactatt tcaaaccttg caagcgaaaa aacaagaaaa
      901 aatcatccac ccatttttag aggaagaagt ggaaatcggc ttgttacctt atatccaagc
      961 gatgttattg gctcgtcatt tgcgtggcga tttggcagaa tatccgccgt ttttaatgcg
     1021 ttaaaatctg caaaattttg ttgaaatttg accgcttgtt tatgttttat tcattgagga
     1081 attagcaact atgctgatgt tgattaccta cgacatttca tttgatgacc ccgaagggca
     1141 ggctcgccta cgccgtattg ctaagcattg tttggattat ggtgtgcggg cgcaatattc
     1201 tgtgtttgag tgtgatgtta ctcctgctca gtgggtaaca ttgaaaaata aattattggc
     1261 aacttacaac ccagactgtg atagtttgcg cttttaccat ttaggcagta aatggaggaa
     1321 taaagttgag caccatggcg caaaaccttc agtggatatt tttaaagata cgctgatttt
     1381 ataaatcgct agcctgtagt tctcataaaa atgtagcaag gttagcgaat ctatattgtt
     1441 ctttaataat caaggaatta gaaaaaataa ggcacaatat attggcgata tgctatactt
     1501 tatccactct ctacaaaacg ttagcgaata aagggctaaa aagcctgata tttcaatacg
     1561 ttatcttata gggaccagcc acctacgcgt ggctgcgaat tgaaacccta taacgagcaa
     1621 tggcattttg atctacggta aaccagccac ctacgcgtgg ctgcgaattg aaaccttttt
     1681 caagaatcaa gattaagaga tccaaacaac cagccaccta cgcgtggctg cgaattgaaa
     1741 ccaccgctgc tacttcggtt atcggagtag tttgcaccca gccacctacg cgtggctgcg
     1801 aattgaaacg tggcacagta acacgagcag atgctgataa acgcccagcc acctacgcgt
     1861 ggctgcgaat tgaaaccagc agccgttgtt accgtggtgc aatgcttgcg ccagccacct
     1921 acgcgtggct gcgaattgaa actacactta ttgccatagg gtagtagtaa tcttttaccc
     1981 agccacctac gcgtggctgc gaattgaaac tgcgattttt ggatttttcg ggcgataaat
     2041 gataccagcc acctacgcgt ggctgtgaat tgaaactcgt ggctggttat acaaagaaaa
     2101 gcattgttgg gcagccacct acgcgtggct gtgaattgaa acttaaatct aaagctaaag
     2161 ctattttatt aattaaagca gccacctacg cgtggctgtg aattgaaact ttaccgttta
     2221 ccgattggat tttaatgcta gaggcagcca cctacgcgtg gctgtgaatt gaaaccctaa
     2281 attgccgtaa aaatctgcca ttagctacgc gcagccacct acgcgtggct gtgaattgaa
     2341 acctcataac gaatccaatc ctgttcggtt aatccccgca gccacctacg cgtggctgtg
     2401 aattgaaaca ggggcgtgta ccgcaatcaa ttttaattat aaccaagcag ccacctacgc
     2461 gtggctgtga attgaaacct cgtcttgaat tggaaaatca agggcgacaa taggcagcca
     2521 ccttcgcgtg gctgtgtatt gaaacggtgt acccacaaat cctatgtttt cgccattggc
     2581 tgctaccttc gcatcaatat atattgaaat atcaatggca aatttgtatg ttgttaatta
     2641 gactgattgc atctgctatg tatcatagta atgacgaaaa tattctattt tgcaaaaaat
     2701 aatcagaaat tacccgcttg ttcgaactga gtttttgttt tctaagatgt gaaatgatac
     2761 actttagata gttttaaaat atagagacag taagatgagt agtacggaat tattagtgaa
     2821 tgttacccca agcgaaacaa gggtagcgtt ggtagaaaac ggaatattga aagaattaca
     2881 tattgagcgg gaagctaaac gcgggattgt tggtaatatt tataagggaa gggtgacaag
     2941 ggtattacca ggtatgcaat ctgcttttgt ggatatcggc ttggagaagg ctgctttttt
     3001 gcacgcttct gacatcgttt cgcatacgga atgtgttgat gaaaatgaaa agaagcaatt
     3061 tctggttaaa gatatttctg aattggtgcg tgaagggcaa gatatagttg tacaagtagt
     3121 gaaagatcca attggtacta aaggagctag gctcactact gatattacgt taccatctcg
     3181 ttatttagtg tttatgccag aaaatagcca tgtgggagta tctcagcgga ttgaaagtga
     3241 agaagagcgt gctcgtttaa aaagcttggt tgagccttat tgtgatgaac ttgggggctt
     3301 tattgtacgt accgctgcag aagaggcaac tgaagaaagt ttaaagcaag atgttgaatt
     3361 tttaaaacgg ttgtggcgta aagtattaga acgaaaaggg aaatattccg caaaatcaat
     3421 gctttatgga gagcttgcgc ttgctcaaag ggtactgcgt gattttattg gtacacatat
     3481 caattcggtt agaatcgatt caaagctaac ttatgagcaa gtgcgagaat ttttagctga
     3541 gtttatgcca gaattaacgg attgtgtcac cctctatacc ggtcagcaaa ctttatttga
     3601 tgcctatggt gtagaaaagg caatccaaaa ggcattggat aaacgggttg atttaaaatc
     3661 ggggggctat ttaattattg agcaaactga ggcgatgacg actattgata ttaatactgg
     3721 tgcttttgtc ggacatcgta accttgcaca tacgattttc aacacaaata ttgaagcaat
     3781 acaggcaatt gcacaccagc tacagttgcg taatttaggt ggtattatca ttattgattt
     3841 tattgatatg caagaggaag aacatcgtga gcgcgtttta caatcgttac aagaggcatt
     3901 aaaaggcgat cgtgttaaaa ccaatgtgaa tggctttact cagcttggct tggtggagat
     3961 gaccagaaaa cgtacaaggg agagtctaga gcgaattctt tgttgcgatt gccaagcttg
     4021 ccaagggcgt ggcacagtga aaactgtaga gacggtttgc tatgaaatta tgcgtgaaat
     4081 tgtgcgtgta catcatttgt ttaagacaga aaatattcac gtttatgcag ctaaagatgt
     4141 tgctgaatat ttaattaacg aggaaagcca cgcattattg gctgagcttc aggcgtttat
     4201 cggtaaaaaa attgagatta aacttgagcc atattatcat caagagcagt ttgatgtggt
     4261 cgtgatgtaa tctattactt ggttgaggct aaatagttag cctcaatatc gttagttaca
     4321 aaaaatttag aaaatctgac cgcttgtttc ctatccaaat tcctcaaaat aacgtataat
     4381 cgtccagttt tatttatcct tttttgaaat ctaaggtaat tcaatgtctg aagtagaaaa
     4441 tcaagaatta gatctaaacg gtgaaatgtt agcccgccgt gaaaaattaa acaaaatccg
     4501 tgagcagggt aacgcatttc caaatacatt ccgtcgtgat gcgttagcca aagatctgca
     4561 cgctcaatat gatgcagtgg aaggtgaaac cttaaaagaa cagaatattc aagtgaaagt
     4621 tgccggtcgt attatgttaa aacgagtaat gggtaaggca tctttcttta ccattcaaga
     4681 tgtgagcggt gcgattcagc tttatgtagc tcgtgataac ttaagtgaca gcgtttacga
     4741 agaaaaagtc agcctttggg atttaggcga cattgtgggc gtcgaaggtg cgttatttaa
     4801 aaccaaaacc ggtgaattaa cggttcgttg ctctgaagtt caacttttaa ccaagtcttt
     4861 acgcccgttg ccggataaac atcacggttt aacggattta gaaactcgtt atcgtcagcg
     4921 ttatttagac ttgatttcta atgaagaatc tcgccgtact tttatgatcc gctcgcaagt
     4981 agtttcaggc attcgcaaat tcttcttaga aagagacttt attgaagttg aaacgccaat
     5041 gttgcaagtg atcccgggcg gtgcggcagc gaaaccgttt atcactcatc ataatgcgtt
     5101 agatgtggat atgtatctgc gtattgctcc agagctttac ttaaaacgtt tagttgtggg
     5161 tggttttgag cgagtatttg agcttaaccg taacttccgt aacgaagggg tttcagtacg
     5221 ccacaatcct gaatttacaa tgattgagta ctaccaagcc tatgcggatt atcacgattt
     5281 aatggataat accgaagaac tgttacgcca attagcctta gatattcttg gcacaactga
     5341 cgtaccttat ggtgattatg tattcgattt cggtaaaccg tttgagcgta ttacgatgca
     5401 cgatgcgatt gtgaaatatg gtaacggcat tcaacgtgaa gatttagaca gcttcgagaa
     5461 aagtgtggaa attgcgaaag gcttaggcat tgaaattcaa aaatcttggg gtttaggctc
     5521 ggtagtcaat gcgatttttg aagaagtggc agaacatcaa ttaattcagc caactttctt
     5581 gatggctcac ccggcagaaa tttcaccatt agctcgccgt aatgatgaaa acccagaggt
     5641 aactgatcgt tttgagttat ttatcggtgg tcgtgaaatt ggtaatggtt tctcagaatt
     5701 aaacgatgca gaagaccaag cagagcgttt tgatgctcaa gttgcggcga aagatgccgg
     5761 tgatgatgaa gcaatgttta aagatgaaga ctttatcgtg gcattggaac acggtctgcc
     5821 gccaacagcg ggtgaaggtt taggaattga ccgcttagta atgattttcg ctaacgcccc
     5881 atcaatccgt gatgtaattt tattcccagc gatgcgtcag aagtaatcag aaatagaaca
     5941 aaagcacact tcggtgtgct tttttgtatt acaagcggtc aaatttataa taaaaaatgc
     6001 aatttatttt gctaatccgg ctttaatcat cggttcaaaa aagtcataat caaccaaaaa
     6061 ggcatcgtgt ccgaaatcgg agtgaaactc gtggaactcc aaatttacgc ctgcctgttc
     6121 taatttttgt ttgctcttat acacgtcaac ttgcttgaat agttggtcgc ttgttaccgc
     6181 tacaaaagtg tagttggctt taatacgttt tagggcggtt tcttcatttt catagccaag
     6241 agccgggtcg tataaatcta atgctcggag taaacggagg taagtgttgg catcgaaacg
     6301 acctaaaaat ttcgtgcctt gatagcttaa ataggattcc acttggaaat ggtcgcccca
     6361 aatttgtcct tgctgtttgg tttctcgtcc aaaggcttta gcaagttgaa tatcagtacg
     6421 gtaagtcagc ataccgagca tacgggcgat ttttaagccg ttatcaggtg caatgccatc
     6481 ataatagttc ccaccgttaa agtgtggatc gttaataata gcttggcgca taacgtggtt
     6541 aaaaccgata gcctcggcac ttagggtaag tgacgaacaa agatttataa tgttgcgaac
     6601 tttatcaggg taactaatac cccactgtgt tgcttgcatt ccgccgaaag atccccctac
     6661 cactgcgtga agttgaggga tttctaaata gtccaataat gctttttgta cattaacaat
     6721 atcttgcact gtaataattg gaaacaaact accgtaaggt ttattggttt tagggttaat
     6781 cgaagctggg ccggttgtgc ctttacaacc gcctaataca ttactgcaaa taaagaaata
     6841 tttatcggta tcaaacgcaa gccctttgcc gatgaaatct tgccaccagc ctttctcggt
     6901 tggtgagtca tagtaaggct tagcatcacc ggtaagggcg tggcaaagca agaccgcatt
     6961 gcttttctct gcatttaatc tgccgtaagt ctggtaagcc actgtgatag gggacagttc
     7021 gcctcctaat gtgagtggta aaggtacgtc ctcaaaaagg gtaatctgct gagccataaa
     7081 aatcctgttt gcaaaaaatt ctgctttttt gaccgcttgt tgtaatgacc gttaaattag
     7141 cggtgttcat ttcaattgtc aagaattttt agacgtctaa acgtctagat ttttaaacgg
     7201 ctaaaatcaa aattttattg ctgagaagat atttattact taacaaataa catgaaatag
     7261 aataaattta ttgaacgatt agactatttt gtttgtctct aatttaccca tcttaaatag
     7321 ggtagcaaaa gtaaaggatc tcatttgaac caaacgcgtg ataggttaga aaaattgcca
     7381 cttttccata aaatgcagca gtttattatt aaggcattga aaataattgc aattttcccc
     7441 ttattgggaa tagctatatt attagtggtt gattcactta caagttatat tgtgagggat
     7501 aaaatttata cagatagtaa acagattcct taccgggagt atgcagttgt actcggtacg
     7561 gcaaaatttt actctaaaga tgtgattaac caatattata aatatcgttt ggaagccgct
     7621 aagcaattag tccaagaagg aaaggtcaat cagcttttgt taagtggaga taataaaacg
     7681 ccgtactata atgagccaaa aacaatgaca agtgatctac ttaaaatggg gattgcgact
     7741 tcaaaaatta agcaggatta tgcggggtat accacttttt attcaataat tagggctaaa
     7801 aaagtatata aattaccgcc atttacgatt atctcccaaa aattccactg tgaaagggca
     7861 ttgtttattg caaaatttag ggatattgat gcaatttgtt atgccgctac atatccagag
     7921 ggggcttatc aggtacgaat gcgggaaatt ttagccagat cggcaatggt ttttagtttg
     7981 ttgataggta aagagcctga atcattggaa gatatccgtt ctaaatgaga tagccggtca
     8041 gataatgttg accggctatt ttgcttataa aataatggtt ttgtttttat atacaaatac
     8101 tttgtcagca agcactaatt ctaaggcttg gctaagtacg gttttctcga catcacgtcc
     8161 ggcacgcatc atagcctctg cggtgtaggt gtgatcaaca ttaatcacat tttgcataat
     8221 aatcgggcct tcatctaatt catcattcac aaaatgggcg gttgcaccga taattttcac
     8281 tccacgttcg tatgcacgat gataaggttt tgcaccaatg aaagcgggta agaacgagtg
     8341 gtgaatattg acaactcggt ttggataacg agcgacaaat tccggattca gcacccgcat
     8401 atatttagcc aacacaatat aatcaggtga atattcatca attttttccg ctaataattt
     8461 atcgtgttcc actcgggtta aattttcgtg gctgactaaa tggaatggaa tatcgaaacg
     8521 ttcaactaaa ctttttaatg tttcgtggtt tccaatcacg gcagcaattt ctacatctaa
     8581 tccaccatag taatttttca tcagtaagtc acctaaacaa tgtgcttctt tggtaactaa
     8641 aataacgata cgttttcttt gtttagggag taatttatag cttgagcctt caggtaaggt
     8701 aaattttaaa tcagtgagta aggtttcatc attaaaaatt ccgtttaatt cggtacgcat
     8761 aaaaaaacgt ttagtttcat tctcaacaaa ttcagaattt ttaataatat ttaattggtg
     8821 cttatagcaa atattggtaa ttttagcgac aagtcctgta tcatcaggac attcagtt
//
LOCUS       DANMCL010000103         8801 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.104, whole genome shotgun sequence.
ACCESSION   DANMCL010000103 DANMCL010000000
VERSION     DANMCL010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8801
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.104"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(50..823)
                     /locus_tag="PXF40_002342"
     CDS             complement(50..823)
                     /locus_tag="PXF40_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HDL5803631.1"
                     /translation="MNLSNALKLIKYNELDVLEVNHNKFKAKIALQGAQLLSWQPYNA
                     EQDVLWLSEIEPFRIGSAIRGGIPICYPWFGSIKEPAHGTARIQEWRLVEHTCSDENV
                     GLVFALENKAKMEMMLGETCELYFTHLDPEPAQLALHSYFNIGDIEKVEVQGLPTRCF
                     DKLTDQEVEVPSPRKISENVDCIYPAQAVNFIQDFANQRTIKVEHINATETVLWNPWH
                     NTVSAMTETAYQNMVCVETARINTLLQQNETLGVRVLVR"
     gene            972..5168
                     /locus_tag="PXF40_002343"
     CDS             972..5168
                     /locus_tag="PXF40_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HDL5803632.1"
                     /translation="MKTKTFTRSYLASFVTIVLSLPAVASVVRNDVDYQYFRDFAENK
                     GPFSVGSMNIDIKDNNGQLVGTMLHNLPMVDFSAMVRGGYSTLIAPQYLVSVAHNTGY
                     KNVQFGAAGYNPDSHHYTYKIVDRNDYEKVQGGLHPDYHTPRLNKLVTEVVPAAVTNA
                     GTSIKPYLNEERFPMFLRAGSGTQALRGKESNKTTGIAGAYEYLTGGTTLQLSKSSPD
                     HWLDYSSNLYQVSYGPLSTYALPGDSGSGSYAYDMNEKRWVLVGVLNFYNGMDNQFNR
                     SAIIRKDFHEKKFAEDIAGTINNTVQNAQFNWTAQGKSSSLSQSNNVQKLNVDLKDSS
                     IANQNTSLPQENHGKTINFNGKDATIVLKQDIDQGAGALNLNANLTIRPETDQTWQGA
                     GIIVGKDKKVNWQVKNPQGDRLSKLGEGTLYVNGRGQNLGDISVGDGIVILNQQADHQ
                     GRKQAFNTVGIVSGRPTVVLGSADQVNPDNIYFGFRGGRLDLNGNSIAFKRIQNSDKH
                     ARIVNHNRDHISTLIIQGQDPLTSNDLIWGKWASNSPADIYEYTNPYQNKRKDYFRLK
                     GNSRVYYPTNATSNDHWEFLSSNREQAIQKILDAKNLRQRYDTFNGFIGEDASNKTNG
                     ILNVVFDTKTEVNTEQDKLKNIYTMSGGFNLNGELTLKGGTLLLSGHPTPHAYDIKNK
                     HDVVRENDWQDSHFTAKNITVNKMAQLYIGRNVNEVNSHFTATDKAKLNLGFINRSTP
                     SCYDSEYTGTTHCEVQAVISDNIFANLATTAIKGNVKLQNHSQLNLGKANLTGSVQAD
                     QTTHITLANHSHWLNNGTSQIGHLTMEKGSILSLNDKFATTEIPVRFNKMIIQGNLKG
                     NGRINYTANLAKGESDHLQVDGIAEGNFVLAVRNSTTEANPKSSLNLLSLKNSNQEGN
                     KASISLENNYVDLGTYRYVLENRNHNYHLFNPLIPNSTSKEMNATSVSSIPKKESVTN
                     VPTLDKKETEQNLTQLQKDFSAHQLENQKAKQSMINAQSELRRLNSQLNVLQKYVNSR
                     RLGYYTQQAVLEQISIIQNKIKQTQTIFNDANATVKLTDQKLEEAKLALGSVNDLVLI
                     KASAPAMQATNQDTSMMNIIQADWISQYANTALSELSAQANSALQISNSLDRQLFKQS
                     DKFNVWSSVEHQKTEHKSDLYRPYKQQTNLTQLGIQMPIDNGLMFGVALSKNHANAEF
                     NEGVNGKSNLLMASLYGKWQSQQGTFISLDGSYGKAKNQLYLFGENHFTRRISSIGAN
                     IGHQFDLAGVQIQPTIGARYYHFSGQDYTLGGAKISSPNTHFMTYQAGLKASKTFSLD
                     DWKVEPSITTHYVDASNKRLAVNVNNNNINQRFGRYLKTEAGIRFEHNQWQFDLHAGF
                     INGNEIKKQHFAGVKLGYSW"
     gene            complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXF40_002344"
     CDS             complement(5223..6317)
                     /gene="mobA"
                     /locus_tag="PXF40_002344"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HDL5803633.1"
                     /translation="MSKTIEERISAVILAGGLARRMNGVEKGLQLFEGKPLISHILAR
                     LSPQVSDIWLNVNRSIEQYQQLYPAFSYYQDSLPDFQGPLSGMLAGFEQIESDYLLFV
                     PCDTPFMPELLLQKLKTALRINNVQIAYAHDGERPHPTFALIHRSVQEDLKAYLGSNQ
                     QQLLAFFQSQKSVAVDFSEQKSAFTNVNTLEDLSRVSQFPVKNLAITGYSGTGKTTLL
                     EKLIPKLTACGIRVGLIKHSHHNVDVDKKGKDSYRLREAGANPTMIVCDERWALMTET
                     KQAVEFSQLIAKFNPQEVDLVFVEGFKHETLPKIQLHRKGIEKPLPELDQWTIATATD
                     YPLERENWLDINNIGGIADFIKNWLENKAS"
     gene            6404..6673
                     /locus_tag="PXF40_002345"
     CDS             6404..6673
                     /locus_tag="PXF40_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1040 family protein"
                     /protein_id="HDL5803634.1"
                     /translation="MKCERLEELLELLGEHWRKNPDLHLIDILQQLSVEVGEPDNFKA
                     LSDEVLIYQLKMRNAGKFEPIPGIKKDYEDDFKTALLRARGILND"
     gene            6737..7375
                     /locus_tag="PXF40_002346"
     CDS             6737..7375
                     /locus_tag="PXF40_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HDL5803635.1"
                     /translation="MKKLALKTAFVALSALFTFNSTAIAADPTAGKEYIEVRKAPSAQ
                     KEVVEFFSFYCPHCYDFELSYKIPSQIKEKLPSDSKLVQYHVNFLGRQSEDLTRAWAL
                     AMALGAEDKVKTALFEGAQKDAFKSMDDIRSVFLANGITAEQFDSGINSFAVNGLVNK
                     QVQLAEDFQIRGVPAFFVNGQYQLNLEGFADSSSTNDFIKRYVDAVVFLSKK"
     gene            7459..8235
                     /locus_tag="PXF40_002347"
     CDS             7459..8235
                     /locus_tag="PXF40_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HDL5803636.1"
                     /translation="MTKLSILNLVPIREGQTAKQAVDSMVKLAKHAESIGIERYWIAE
                     HHNMKNLASSATQLLIQHALSHTEKLRVGSGGVMLPNHSPYIVAEQYGTLETLYPNRV
                     ELGLGRAPGTDMRTATALRRNAQSLPFPDEISELKGYFEGTNSVSAYPAQGLNVPFYI
                     LGSSPESAYLAAERGLPYAFASHFAPRFMDDAVRIYRTHFKPSEVLDKPYVILGVNAI
                     AAETDQEAEQLATTQTQFFLNVVTNAQNYLQPPVESDDKV"
     gene            8245..8499
                     /locus_tag="PXF40_002348"
     CDS             8245..8499
                     /locus_tag="PXF40_002348"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase"
                     /protein_id="HDL5803637.1"
                     /translation="MKAEIVPHFGPVSFQQNALYNQEKPVVRQMTACSLIGSRESIEQ
                     QLKSLKARIEIDEIMAVSYIFDEQKQHQSYTWLKEIADKV"
     gene            8501..8794
                     /locus_tag="PXF40_002349"
     CDS             8501..8794
                     /locus_tag="PXF40_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5803638.1"
                     /translation="MSKTMQQKAADAHNMCKLKGDSMLDNSDRQIAFEAVYDSEEIAV
                     QAVEFFTQKAKSVETEPCDIQSEITPIIDGFLMKMWITFSCQAEVILFQMAVR"
BASE COUNT         2912 a         1758 c         1626 g         2505 t
ORIGIN      
        1 taaatttgta aacaatatta ctaattcagc tgcttgctct cattaaacac tatcgcacta
       61 aaaccctcac tcctagcgtt tcattttgtt gaagtagagt atttatccga gcggtttcca
      121 cacataccat attttgatac gccgtttctg tcatcgcact aacggtatta tgccaaggat
      181 tccaaagtac ggtttcggtc gcattaatat gctcaacttt aatggtgcgc tgatttgcaa
      241 aatcttgaat aaaattcacc gcttgtgccg gataaataca atccacattt tcacttatct
      301 tgcgaggtga tggcacttca acttcttgat cggttagctt atcaaaacag cgagttggca
      361 agccttgcac ttccactttt tcaatatcac caatattaaa ataagagtgc aatgccagtt
      421 gtgctggttc tggatctaaa tgggtaaaat ataactcaca agtttcgcct aacatcattt
      481 ccattttcgc tttattctct aaggcaaata ccaaaccgac attttcatca gaacaagtat
      541 gctcaactaa acgccattct tgaatgcgag ctgtgccgtg ggcaggctct tttattgaac
      601 cgaaccacgg ataacaaatt ggtataccgc cacgaatcgc agagccaatt ctaaacggtt
      661 ctatctcact taaccacagc acatcttgct ctgcattata cggctgccaa cttagcaatt
      721 gtgctccttg taatgcaatt ttagctttga atttattgtg attaacttct agcacgtcta
      781 attcattata tttgattaat tttaatgcat tactcaagtt cataatttat tcctttgatg
      841 actaaaataa ttgacagcaa acactactta gtaattttat ataaaataag ggaagacatc
      901 ttgccaaact atcagttata agacagaata gccagaattt tttattactt ataaggataa
      961 acttctcatt tatgaagacc aaaacattta ctcgttctta tcttgcttct tttgtaacaa
     1021 tcgtattaag tttacctgct gtagcatctg ttgtacgtaa tgatgtggac tatcaatact
     1081 tccgcgattt tgccgaaaat aaaggaccat tttcagttgg ttcaatgaat attgatatta
     1141 aagacaacaa tggacaactt gtaggcacga tgcttcataa tttaccaatg gttgatttta
     1201 gtgctatggt aagaggtgga tattctactt taattgcacc acaatattta gttagtgttg
     1261 cacataatac tggatataaa aatgttcaat ttggtgctgc aggttataac cctgattcac
     1321 atcactatac ttataaaatt gttgaccgca atgattatga aaaggttcaa ggagggttgc
     1381 acccagacta tcatactcct cgattaaata aattagtaac agaagttgtg cctgccgcag
     1441 tcaccaatgc aggtacatct attaaaccct acttaaatga agaacgcttc cctatgtttc
     1501 ttcgtgctgg ttcagggaca caagcgctaa gaggaaaaga aagtaataaa acaactggaa
     1561 tcgctggtgc ttatgaatat cttactggcg gtaccacatt acaattatct aaaagctccc
     1621 ctgatcactg gttagattat tcaagtaacc tttatcaagt aagctatgga ccactttcaa
     1681 cctatgcact acctggtgat agtggttcag gttcttacgc ctatgatatg aacgaaaaac
     1741 gatgggtatt agttggtgtg ctcaatttct ataatggtat ggataatcaa ttcaaccgct
     1801 ctgcgattat ccgtaaagat ttccacgaga aaaaatttgc cgaagatatt gcaggaacaa
     1861 tcaataatac cgtacaaaat gcacaattca attggactgc tcaaggtaaa tccagctctc
     1921 ttagtcaatc aaataatgtg caaaaactca acgttgatct aaaagatagt agcattgcaa
     1981 accaaaacac ttctctgcca caagaaaatc acggtaaaac cattaatttt aatggtaaag
     2041 atgcaactat tgtactaaaa caggatattg accaaggtgc aggtgcatta aatctgaacg
     2101 ctaatctcac tattcgtcct gaaacagacc aaacttggca aggtgcaggt attatcgtcg
     2161 gtaaagataa aaaagtgaat tggcaagtaa aaaatccaca aggcgatcgt ttatctaaac
     2221 tcggggaagg aacactctat gtaaatggac gtggacagaa tcttggcgat atcagtgtag
     2281 gtgatggtat tgtaatactt aaccagcaag ccgatcacca aggaagaaaa caggccttta
     2341 atacagtagg aatcgtaagt ggtcgcccca ctgttgtgct aggtagtgca gatcaagtta
     2401 atcccgataa tatttacttt ggatttcgcg gaggtcgttt agacctaaac ggtaacagca
     2461 tcgcctttaa acgtattcaa aacagcgata aacatgctcg tattgtaaac cacaatcgcg
     2521 atcacatttc taccttaata atacaaggcc aagatcctct cactagtaat gatcttatat
     2581 ggggaaaatg ggcaagtaat agcccagcag acatttacga atataccaat ccttatcaaa
     2641 ataaacgcaa agattacttc cgtctgaaag gtaattcgag agtatattat ccaacgaatg
     2701 ctacaagtaa cgatcactgg gaatttcttt ccagtaaccg cgagcaagca atacagaaaa
     2761 tcctagatgc caaaaactta agacagcgct atgacacgtt taatggtttt ataggggaag
     2821 atgcttccaa taaaactaat gggatattaa atgtcgtgtt tgatacaaaa acagaagtaa
     2881 atacagaaca agataaatta aagaatatct acacaatgtc gggaggattt aaccttaatg
     2941 gtgaactcac ccttaaaggt ggtacattgt tgctttctgg tcacccaacg ccacacgctt
     3001 atgatattaa gaataagcat gatgttgtgc gtgaaaacga ttggcaagac agccatttta
     3061 ctgctaaaaa tatcacggta aataaaatgg cacaactcta tatcgggaga aatgtcaatg
     3121 aagtaaatag tcactttact gcgactgata aagccaaact caatttagga tttattaatc
     3181 gttcaacgcc aagttgctat gattctgaat acacaggcac tacacattgt gaagtgcaag
     3241 cggtcatttc cgataatatt tttgcaaatc tagcaacaac cgccattaaa ggtaatgtta
     3301 aattacaaaa ccatagccaa ttaaatttag gcaaagcaaa cctcactggt tctgtacaag
     3361 ctgatcaaac aactcatatc actttagcaa atcacagtca ctggttaaac aatggtacga
     3421 gccagattgg gcatcttaca atggaaaaag ggtcgatcct tagcctaaac gataaatttg
     3481 ctaccacgga aatcccagtc cgattcaaca agatgatcat ccaaggtaat ctaaaaggta
     3541 atggacgaat taactatacc gcaaatttag ccaagggcga atctgatcat ctccaagttg
     3601 acggtattgc tgaaggaaat tttgtccttg ccgttagaaa tagcacaact gaagcaaatc
     3661 caaaaagctc attaaaccta ctaagcttaa aaaatagcaa ccaagaaggc aataaagctt
     3721 ctatttctct agaaaataat tatgttgatc taggtactta tcgttatgta ttagaaaatc
     3781 gtaatcacaa ttaccattta tttaatccat taataccaaa ttcaacctct aaagagatga
     3841 atgctacatc tgtatcctct attccaaaaa aggaatctgt tactaatgtt cctactttag
     3901 ataagaaaga aactgaacaa aatcttactc aactacaaaa agatttttca gcacaccaat
     3961 tagaaaatca aaaagcaaaa caatctatga taaatgctca atctgagcta agacgactca
     4021 attcacaact gaatgtattg caaaaatatg tgaattctcg tcgcttaggt tactatactc
     4081 agcaggcagt tttagaacaa attagcatta ttcaaaataa aattaaacaa acacaaacaa
     4141 tatttaatga cgctaatgca actgtaaaac tcacagatca aaagctagaa gaagccaaat
     4201 tagctctagg ctctgtaaac gatcttgtat taataaaagc ctctgctcca gcaatgcaag
     4261 caactaatca agatacgagt atgatgaata ttattcaagc agattggata agccaatacg
     4321 ctaacacagc actttctgaa ctctcggcac aggctaattc tgctctgcaa atcagtaata
     4381 gcttagatcg ccaactcttc aaacaaagcg ataaattcaa cgtatggagc agcgtcgaac
     4441 atcagaaaac cgagcataaa tcagatttat accgcccgta taaacaacaa accaacctga
     4501 cccaactggg catacaaatg ccgatagata acggtttaat gtttggagtt gcattatcta
     4561 aaaaccacgc taacgcggaa tttaacgagg gtgtaaacgg taaatcgaat ctactaatgg
     4621 caagcctata tggtaagtgg caatctcaac aaggcacttt tatcagcctt gatggcagct
     4681 acggtaaagc aaaaaaccaa ctctacctat ttggtgaaaa ccactttacc cgccgaattt
     4741 cctctattgg tgctaacatt ggacatcaat ttgacctcgc aggagttcaa attcagccaa
     4801 caataggagc aagatactac catttcagcg gccaagacta tacactagga ggagcgaaaa
     4861 tcagctcacc aaatacccac tttatgacat atcaagcggg tctaaaagct agtaaaacct
     4921 tttcattgga tgactggaaa gttgaaccaa gcattacaac ccactatgtg gatgcaagta
     4981 acaaacgctt agcagtaaac gtcaataata acaatatcaa ccaacgtttc ggtcgctatc
     5041 tgaaaaccga agctggtatc cgatttgaac ataaccaatg gcaattcgac ttacacgctg
     5101 gtttcattaa cggcaacgaa atcaaaaaac aacattttgc tggtgttaag ctaggatata
     5161 gctggtaaga aaaagcccct agaactattt ctaggggctt tttctactct taaaaagagt
     5221 atctaacttg ccttattttc taaccaattc ttaataaaat ctgctattcc cccaatatta
     5281 ttaatatcca accaattttc tctctcaagc gggtaatccg ttgcggtggc aatcgtccat
     5341 tggtctagct ctggcaatgg tttttcaatc cctttgcggt ggagctgaat ttttggcaag
     5401 gtttcgtgtt taaagccttc tacgaaaacg agatcaacct cttgcgggtt gaattttgca
     5461 attaattgag aaaattcgac cgcttgtttg gtttctgtca ttaatgccca acgttcatcg
     5521 cacacaatca ttgtcgggtt tgctcctgct tcacgtaggc ggtagctgtc tttgcctttt
     5581 ttatctacat caacgttatg gtgggaatgt ttaatcagcc caacccgaat accgcaagcg
     5641 gtcaattttg ggattaattt ttccaataag gtggttttac ctgtgccgct gtagcctgta
     5701 attgcaaggt tttttacagg gaattggctt actcggctta aatcttccaa tgtattcacg
     5761 ttggtgaatg ccgatttttg ttcggaaaaa tcaactgcca cgcttttttg tgattggaag
     5821 aacgcaagca attgctgttg gtttgagcct aaataggctt tcaaatcttc ttgtaccgaa
     5881 cgatgaatca acgcaaaagt gggatgtgga cgctcaccat catgggcata tgcaatttgt
     5941 acgttattta tccgcaaagc agtttttaat ttttgcaata acagctcagg cataaagggc
     6001 gtatcgcaag gcacaaaaag caaatagtca ctttcaattt gctcaaatcc tgccagcatt
     6061 ccactgagtg gaccttgaaa atcaggcaag ctatcttgat agtaagaaaa agcaggataa
     6121 agctgctgat attgctcaat agaacgattg acattaagcc aaatgtcact aacttgtggt
     6181 gaaagtcggg ctaaaatgtg tgaaataagc ggttttcctt caaaaagttg taaccctttt
     6241 tctaccccat tcattcgacg agctaaaccg cccgctaaaa tcacggctga aatgcgttct
     6301 tctattgttt tactcacagc tttatccctt aaaattttgc aaaaataaga gtaaaagtat
     6361 attatttcgt ttaatttcca acaagttttt taaggggtaa aagatgaaat gcgaacgttt
     6421 agaagagtta ttagagttac ttggcgaaca ttggcgtaaa aatcctgact tacacctcat
     6481 tgatattttg cagcagcttt cagttgaagt gggcgagcct gataatttca aagcgttaag
     6541 cgatgaagtg ttaatctatc agcttaaaat gcgaaatgca ggcaaatttg agcctattcc
     6601 cggcataaaa aaagattatg aagatgattt taaaacggct ttattgcgag ctcgtggaat
     6661 tttaaacgat taagattgtc ttatccgtta gctagtttag catttattat ttatcaacat
     6721 ttttgaagga atcattatga aaaaattggc attaaaaacg gcatttgttg cactttctgc
     6781 cctttttaca tttaactcaa cggcaatcgc tgctgatcca accgcaggca aagaatatat
     6841 cgaagtgcgt aaagcacctt ctgcacaaaa agaagtggtg gaatttttct cattctactg
     6901 cccacactgt tatgattttg aattaagcta caaaatccca agccaaatca aagaaaaatt
     6961 accaagcgat agcaaattag tgcaatatca cgttaatttc ttaggtcgcc aatctgaaga
     7021 tttaactcgt gcttgggcat tagcaatggc attaggtgcg gaagataaag taaaaaccgc
     7081 attatttgaa ggtgctcaaa aagacgcatt caaatcaatg gacgatattc gctctgtatt
     7141 cttagcaaac ggcattacag ctgaacagtt tgatagcggt attaatagct ttgcggtaaa
     7201 tggcttagtg aataaacaag ttcaattagc ggaagacttc caaattcgtg gtgtgcctgc
     7261 attcttcgta aatggtcaat accaactcaa cttagaaggc tttgcagatt cttcatcaac
     7321 gaatgatttc atcaaacgtt atgttgatgc ggttgtgttc ttaagcaaga aataacccct
     7381 taaaatagtt agggttttta caatgctgag taggtaaatc ctattcagca ttttttatat
     7441 gcaaactcgg agaacaaaat gacaaagtta tctatcctaa accttgtacc tattcgtgaa
     7501 gggcaaactg ccaaacaagc ggtcgattct atggtgaaat tagcaaaaca cgcggaaagt
     7561 atcggcattg aacgctattg gattgcagag caccacaata tgaaaaacct tgccagctcg
     7621 gcaacacagc tcctcattca gcatgccctt tctcacactg aaaaattaag agtgggatca
     7681 ggtggcgtga tgttgcctaa ccatagtcct tatattgtgg cagagcaata cggtacgctt
     7741 gaaacactct accctaaccg tgtagaactt gggcttgggc gagcaccagg caccgatatg
     7801 cgaaccgcta ccgctttacg ccgtaatgca caaagtctgc catttcctga tgaaatcagc
     7861 gaactaaaag gttattttga aggcacaaat tctgtgtctg cctaccctgc acaggggttg
     7921 aatgtgccgt tttatatttt aggctcaagc cctgaaagtg cctatttagc agcagaacgt
     7981 ggcttgcctt atgcctttgc ttcacatttc gctcctcgtt ttatggacga tgcggtgcga
     8041 atttatcgca cacactttaa gccgtctgaa gtgttagata aaccctatgt gattttaggt
     8101 gtgaatgcga ttgcggcaga aaccgaccaa gaggcagaac agcttgctac cactcagact
     8161 cagtttttct taaatgttgt taccaatgcc caaaactatt tacaaccgcc cgtcgaatcc
     8221 gatgataaag tgtgaaaaaa ttttgtgaaa gcggaaatcg taccgcattt cgggcctgtt
     8281 tcgttccaac aaaatgcgtt atacaaccaa gagaaacccg ttgttcgcca aatgactgct
     8341 tgttcactta tcggtagccg agagagcatt gaacaacagc tcaagtcatt aaaagcacgc
     8401 attgaaattg atgaaattat ggcggtaagc tacattttcg atgagcaaaa acagcatcaa
     8461 tcctatactt ggttaaaaga gattgcagat aaggtgtgat atgagcaaaa caatgcaaca
     8521 aaaagccgct gatgcacata atatgtgtaa gctaaaaggc gactctatgt tagataactc
     8581 agaccgccaa attgcctttg aagcagtgta tgatagtgaa gaaatagctg tacaagcggt
     8641 cgaatttttc acacaaaaag caaaatcggt agaaaccgag ccttgcgaca ttcaaagtga
     8701 aatcacaccc attatagatg gctttctgat gaaaatgtgg ataactttca gttgccaagc
     8761 agaagtaatc ttatttcaaa tggcggtgag atagatataa a
//
LOCUS       DANMCL010000104         8687 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.105, whole genome shotgun sequence.
ACCESSION   DANMCL010000104 DANMCL010000000
VERSION     DANMCL010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 8687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8687
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.105"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            150..4046
                     /gene="purL"
                     /locus_tag="PXF40_002350"
                     /gene_synonym="purI"
     CDS             150..4046
                     /gene="purL"
                     /locus_tag="PXF40_002350"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HDL5803639.1"
                     /translation="MTIQTFRGSPALSAFRIQQLLQKFQQNQLPVKSVYAEFLHFVAL
                     NRPLVADEENKIKELLHYGPTLEEDEPTGFCLIVTPRIGTISSWSSKATDIAHNCGLA
                     AVERIERGTAYYLEFSETPNESQLTTLKGLLHDRMMETVLDNESQAEQLFAQQEPKPF
                     TSVDILGGGRKALEEANINLGLALADDEIDYLVENFTQLGRNPNDIELYMFAQANSEH
                     CRHKIFNADWTIDGVKQEKSLFKMIKNTFEKTPDYVLSAYKDNAAVMEGSTVGRFFPD
                     QDGQYRYHQEDAHILMKVETHNHPTAISPFPGAATGSGGEIRDEGATGRGAKPKAGLT
                     GFSVSNLVIPKFEQPWENPLSKPNRIASALDIMIDGPLGGAAFNNEFGRPALLGYFRT
                     YEEKVNSFAGEEIRGYHKPIMLAGGIGNIRAEHVQKGEIPVGAKLIVLGGPAMNIGLG
                     GGAASSMASGKSKEDLDFASVQRENPEMERRCQEVIDRCWQMGAENPILFIHDVGAGG
                     LSNAMPELVHDGECGGKFDLRNILCDEKGMSPLEIWCNESQERYVLAVSPEKLDIFTA
                     LCERERAPFAVIGEATKEKHLTLADPHFDNKPIDLPMNVLLGKTPKMQRDVLSKTVKN
                     PPLATADIDLKEAFHRVLRLPAVAEKTFLITIGDRSVTGMVAQDQMVGPWQIPVADCA
                     VTTASLDSYHGEAMSIGERSPVALLDFAASARLAVAESITNIAATNIGDIKRIKLSAN
                     WMSAAGHEGEDAGLYEAVKAVGEELCPELGITIPVGKDSMSMKTTWEENGEQKSVTAP
                     LSLVISAFARVEDVRKTVTPQLRTDKGDTRLLLIDLGEGNNRLGATALAQVYKQLGDK
                     PADVVNVARLKGFFNAMQTLVAQGKLLAYHDRSDGGLITTLAEMAFAGNCGISVEIDR
                     LVDDLAVLFNEELGAVIQVRTEELSEVQAVLNAENLANLTFDIGTAVESDSFEITRNG
                     TTVFSQKRSELRGIWAELTHQMQRLRDNPECADQEFAAKKDPNNKGLSAFLTYDVNED
                     IAAPYINKGVKPSVAILREQGVNSHYEMAAVFDRAGFNAIDVHMSDLISGRRNLNDFN
                     AMVACGGFSYGDVLGAGGGWAKSILFNPMLRDQFSKFFANPNTLALGVCNGCQMVSNL
                     AEIIPGTENWPRFVRNKSERFEARAAMVKINDTNSLWFNGMAGSHMPIAVSHGEGQVE
                     FKNPQQLANLQQQNLVIAQYVDSHLNPTEQYPANPNGSALGITAIGNTDGRVAIMMPH
                     PERVFRAVSNSWCPEDWTEGGAWMRLFRNARVALKY"
     gene            4401..4583
                     /locus_tag="PXF40_002351"
                     /pseudo
     CDS             4401..4583
                     /locus_tag="PXF40_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            5032..5409
                     /locus_tag="PXF40_002352"
     CDS             5032..5409
                     /locus_tag="PXF40_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5803640.1"
                     /translation="MDKSQGVVSVNIRGGSGFGRANNAVGPNYMGMLAGKYQFNDSTW
                     IGALFGHSWRKISQNYKIGGGRKVTDSSIDLSKIDDLDKESSTTSPFNAAHLKQKPMS
                     RMAKLEYGDKYQTITLLPKSGSG"
     gene            6139..6915
                     /locus_tag="PXF40_002353"
     CDS             6139..6915
                     /locus_tag="PXF40_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5803641.1"
                     /translation="MNYSATLSAYIHDLFTPFISYSQTHRAPNIKEIFFSNLGDYGVN
                     TALQPEQAKTTQFGINGFKERVFSEEDKLGFKVLFYNTHLKNYIYNVQHTAVGSAPSL
                     FIFHKNYEKPVNIKGIELEFSYDIGSFYGNLAYARQNTNQPVSFTDASSRVDAASHYG
                     FKTQGFGASKISALPRDYGSLELGTRWFDQRLQIGGVAKYYGKSKRIAIDEFNYTYYP
                     GTHIVKETHRLEETVNKQPIIVDFYVSYEPIKSLILKLEL"
     gene            7519..8013
                     /locus_tag="PXF40_002354"
     CDS             7519..8013
                     /locus_tag="PXF40_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5803642.1"
                     /translation="MSRKYKFHEKSGAYFVSFATVYWVGVFVREIYFQVIVDALDYCR
                     KHKGMILYAYCIMPTHIHLLFQAENQNPSDLIRDFKTFTAKILIQRIKDNLQENRREW
                     LLWMFSRAAERRCNVKQYQFWQHHNQPIEIYSQKFFDEKLNYIHQNPVVSGFVSEPWE
                     WKYN"
     gene            8268..8507
                     /locus_tag="PXF40_002355"
                     /pseudo
     CDS             8268..8507
                     /locus_tag="PXF40_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651213.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
BASE COUNT         2666 a         1688 c         1887 g         2446 t
ORIGIN      
        1 tttgaaaggt attcattagt attgaacaaa tttatttgat actaatgaat aaatgtatct
       61 aacagcaaac gtctgacaaa tatagcaatc gtttgcgcaa tcgtttataa tcggtttagt
      121 ttttcatctt aaataggaaa atccaaagaa tgacaatcca aaccttccgt ggctcgcctg
      181 ccttatctgc ttttcgcatt caacaacttc tgcaaaaatt ccaacaaaat caattacctg
      241 taaaatcagt ttatgcggag tttttgcatt ttgtggcatt aaatcgaccg cttgtagccg
      301 atgaagaaaa caaaatcaaa gagttattgc actacggtcc aacgctggaa gaagacgagc
      361 cgacagggtt ttgcctgatt gttacccctc gtatcggcac gatttcctcg tggtcgtcta
      421 aggcaaccga catcgcccat aactgcggtt tggcagcagt agagcgaatt gagcgtggca
      481 cggcatatta tttagaattt tctgaaacgc cgaacgaaag tcaacttacg acgttgaaag
      541 gcttattaca cgaccgtatg atggaaacgg tgctggataa cgaaagccaa gccgaacagc
      601 ttttcgctca gcaagagccg aagccgttta cttcggtgga tattttaggc ggtggtcgca
      661 aggcactgga agaagcgaat atcaacttag gtttagcgtt ggcggacgat gaaattgatt
      721 acttggtgga aaactttacc caacttgggc gtaaccccaa tgatattgaa ctctatatgt
      781 tcgcccaagc caactcggag cattgccgcc acaaaatttt taatgcggat tggacgattg
      841 atggggtaaa acaggaaaaa tccctgttta agatgattaa aaacaccttt gagaaaaccc
      901 cggactatgt gctttccgcc tacaaagaca atgcggcggt gatggagggc tcaacggttg
      961 ggcgtttctt ccccgaccaa gatggacaat atcgctatca tcaagaagat gctcatattt
     1021 taatgaaagt agaaactcac aaccacccaa ccgccatctc gccattcccg ggagcggcga
     1081 ccggttcggg cggtgaaatt cgtgatgaag gggcgacagg gcgtggggcg aaaccgaaag
     1141 cgggcttgac gggtttttcg gtctctaact tagtgatccc aaaatttgaa cagccgtggg
     1201 aaaacccgct ttccaagccg aatcgcattg cctccgcact ggatattatg attgatggcc
     1261 cactaggcgg agcggcattt aacaatgaat ttggtcgtcc tgcgttattg ggctacttcc
     1321 gtacttacga agaaaaagtg aacagcttcg caggcgaaga aattcgtggc tatcacaagc
     1381 cgattatgtt agcaggcggt atcggcaaca ttcgtgccga acacgttcaa aaaggcgaaa
     1441 tcccggtggg agcgaagttg atcgtgcttg gtggcccggc aatgaacatc ggcttaggcg
     1501 gtggggcggc atcgtcaatg gcatcgggga aatcgaaaga agatttggat tttgcctcgg
     1561 ttcagcggga aaaccctgaa atggaacgcc gttgccaaga ggtgatcgac cgttgctggc
     1621 agatgggggc ggagaaccca attttattta ttcacgacgt gggggctggc ggtttatcaa
     1681 atgcgatgcc tgaattggtt cacgacggcg aatgtggcgg taagtttgat ttgcgtaaca
     1741 tcttgtgcga tgaaaaagga atgtcgccac ttgaaatttg gtgtaacgaa tcgcaagagc
     1801 gttatgtgct tgccgtttcc cctgaaaaac tcgacatttt cacagcattg tgcgaaaggg
     1861 aaagagcccc atttgcggtg attggcgagg caacgaaaga gaagcattta acccttgctg
     1921 accctcattt tgacaataaa ccgattgatt tgccgatgaa tgtgttgctc ggcaaaacgc
     1981 caaaaatgca gcgagatgtt ttgtcaaaaa ctgtgaaaaa tccaccgctt gcaaccgctg
     2041 acatcgactt gaaagaggcg ttccaccgtg tgctacgctt gcctgcggtg gctgaaaaaa
     2101 ccttcctgat taccatcggc gatcgctcag taacgggaat ggtggcacaa gatcagatgg
     2161 tcggcccgtg gcaaattcct gtggcagatt gtgccgtaac caccgcttca ttagacagct
     2221 atcacggtga agcaatgtca attggcgagc gatcacctgt tgctttgctt gactttgctg
     2281 cctcagctcg cctcgccgtg gcagaaagca tcaccaatat tgccgccact aacattggcg
     2341 acatcaaacg cattaaactc tcggcgaatt ggatgtcggc ggcagggcac gagggcgaag
     2401 acgcagggct ttacgaggca gtaaaagcgg tgggcgaaga gctttgccct gaattaggca
     2461 taaccattcc ggtaggcaaa gactcaatgt cgatgaaaac cacttgggag gaaaacggcg
     2521 aacagaaatc tgttactgct ccgctttcgc tcgtgatttc cgctttcgct cgtgtggaag
     2581 atgtgcgtaa aaccgttacc ccacaacttc gcaccgacaa aggcgatacc cgcttgttgc
     2641 tgatcgacct gggcgaaggc aacaaccgct tgggtgcaac cgcacttgct caagtttaca
     2701 aacaacttgg cgacaaacct gccgatgtgg tgaatgtggc tcgcttaaaa ggcttcttca
     2761 acgcaatgca aacccttgtc gcacaaggaa aattgcttgc ctaccacgac cgctcggacg
     2821 gtggtttaat caccacactg gcggaaatgg cgtttgcagg gaattgcgga atttcggtgg
     2881 aaatcgaccg cttggtggac gatttagccg tgttattcaa cgaagaactg ggggcagtaa
     2941 tccaagttcg caccgaagaa ttgagcgagg tgcaagcggt gttaaatgcc gaaaatcttg
     3001 caaatctcac ctttgatatt ggtacagcgg ttgaaagcga cagctttgaa attacccgca
     3061 acggcacaac agtatttagc caaaaacgtt ccgaactgcg tggcatttgg gcggaactca
     3121 ctcatcaaat gcagcgtttg cgagacaacc ctgaatgtgc agaccaagaa tttgcagcga
     3181 aaaaagaccc gaataacaaa ggcttatccg catttttaac ttacgatgtg aacgaagaca
     3241 tcgccgcccc atacatcaac aaaggcgtaa aaccgagtgt ggcgattttg cgtgagcaag
     3301 gtgtaaacag ccactacgaa atggcagccg tctttgaccg tgccggtttc aacgccattg
     3361 acgtgcatat gtcagacttg atttcaggca gacgcaacct caacgacttc aacgcaatgg
     3421 tggcgtgcgg aggcttctct tacggcgatg tcttaggtgc aggcggcggc tgggcgaaat
     3481 cgattctgtt caacccaatg ctgcgtgacc aattcagcaa attcttcgcc aacccgaaca
     3541 cgctggcatt aggggtatgt aatggttgcc aaatggtctc caatctagcg gaaattattc
     3601 caggcacaga aaactggcca cgcttcgtgc gtaataaatc cgaacgtttt gaagcccgtg
     3661 ctgcaatggt gaaaatcaac gacaccaact cactttggtt caacggaatg gcaggcagcc
     3721 atatgccgat tgcggtttca cacggtgaag gacaagttga gttcaaaaat ccacagcaat
     3781 tagcgaactt gcaacagcaa aatctcgtga tcgcacaata tgtggatagc cacctcaacc
     3841 caaccgaaca atacccagcc aacccgaacg gatcggcgtt gggtatcacc gctatcggta
     3901 atacagacgg acgagtcgct attatgatgc cacaccctga acgtgtgttc cgtgcggtca
     3961 gtaactcttg gtgcccagaa gattggacgg aaggtggagc gtggatgcgg ttgtttagaa
     4021 atgcgagagt ggcgttgaag tattaaaaat ctaccttcgt agtgatctgc ccccataggg
     4081 ggcgattaaa attcgaattc atagaacccg aatttttata tatctgataa acgaagttgt
     4141 ttatccttcg tgcttttcct gatatttcaa gtactttctt atcatttctg cattgacatc
     4201 tacggtgtct acgcagtagc ctcttgccac aaaagtgggt tgccccacaa tttatgctta
     4261 cgtaaatagg gaaacttatt gaaaaatctt attggaccct gttcaccctt ttaaatgccc
     4321 cattacgtct tatacagaaa atgaacgtga tttatttgaa cggtcaattc taccttaata
     4381 gaaagtggtt tttagttagc aatcaaaatc acattaacgg aattgagaat ttggagagtc
     4441 aggcaaaatg ctatttgcgt aaatttaacg gcgttcctaa agtacatgaa ttctatttga
     4501 aagaatgcag atggcgtttt aatcacagta acttaaaata tcaagttttc tttttaaaac
     4561 aattggttaa attgagtttc taggatagcc ccttattttt ataatcctct atttaagtgc
     4621 atatttctat ttatgctaat cgtctaacgt atccttttat tataatattg aacatgatta
     4681 atattttcgt cttgtgctat actagactcg tgcaataaag gcacacttct ttcttcagtg
     4741 tctttagcgt tgcgatttaa atttaattac attttttata ggaaagacaa tagaaatgaa
     4801 gatcaaaaaa tatgtatttc acctgactta tacaacactt atctgcccct tacctagggt
     4861 attcgcagag gaaggttata tgttagatac ggttgaggtt aaagcccaag caataaaaaa
     4921 acagatgaag ttttcattaa aacaggggca ataagcaccc gagataaaat cttggaatca
     4981 aaccaaagct tagagactat tgttcgttct atgcctggcg catttacaca aatggataaa
     5041 tctcaaggtg tggtttctgt taatattcga ggaggttctg gatttgggcg agctaataat
     5101 gcagtaggcc caaattatat gggaatgctc gctggcaaat accaattcaa tgactctact
     5161 tggataggag cattatttgg gcatagttgg cgcaaaatct ctcaaaatta taaaatagga
     5221 ggcggacgaa aagttacgga tagctcgatt gaccttagta aaattgatga tctagataaa
     5281 gaaagttcta ccacctcacc gttcaatgca gctcatttaa aacaaaaacc aatgagtcgt
     5341 atggctaaat tggaatatgg cgataaatac caaaccatca cactattacc aaagtcaggt
     5401 agcgggtaga catttaaaaa accaaaacaa ccagttaaat tatcgttttc acttgcccga
     5461 gtcaccttgg ttagatgttc aagtggccta tgcggaaaat caaggcaaac aaaactacaa
     5521 caaagggagc tgaattaata ataaatattt aattcaaggt ttggcaatta acaacaaagc
     5581 gacaacctta aatttgagta acacctttaa agtgtctccg tttaaagatg gagaatggga
     5641 agcaatatta ggttttaatc gtttaaagaa ccgctatagt aaaaatagac atcctgcgga
     5701 attaaactat aacttagaga atggcgaaac cagcgaaaac aacgattctg taggaatgac
     5761 agccgttcgt aaatcgcttt atacttcaac tttccagcct gatggcgaac agaagttcga
     5821 tactttttat ctcgacaatc actttaacta tggtatatgg ggattggata taaacgcaaa
     5881 tattaatacc gctcggttta ttggtcagcg ttttaaatat tttccttttg cgattagaga
     5941 attggagtca gatattagac aggcaagtag aaataggcag tttgagcatt taaggtcatt
     6001 acaatctcaa ttagacaact tgcaaaaaaa cattgtacat atattccaga tgaggatttt
     6061 cctaatgatc ctgaattggg agagtttaac tgtcctgatg tcaattttcc tcatacagca
     6121 acaggaaaac ataaacgaat taattattca gcaaccttgt ctgcttatat tcacgattta
     6181 ttcacgccct ttattagtta ttctcaaaca catcgagccc ctaatattaa agaaatattc
     6241 ttctctaatt taggtgacta tggtgtaaat accgcactac aaccagagca agcgaaaaca
     6301 acacagtttg gtattaatgg attcaaagaa cgggtattta gtgaagaaga taaattagga
     6361 tttaaagtgc tattttataa cactcactta aaaaactata tttataatgt acaacatacc
     6421 gctgttggta gtgctcctag tttattcatt ttccacaaaa actatgaaaa accagtaaat
     6481 atcaaaggga tagaattaga atttagttat gatataggct ctttctatgg caacttagct
     6541 tatgctcgtc aaaatacgaa tcaacccgta tcctttacag atgcaagttc aagggtagat
     6601 gccgcttctc attatggttt taaaactcaa ggttttggtg ccagcaaaat ttcagcgtta
     6661 ccaagagact atggctcatt ggagttaggg acaagatggt ttgatcaaag actacaaatt
     6721 ggcggagtgg caaaatatta cggaaaaagt aaacgtattg cgatagatga gtttaactat
     6781 acttattatc ctggaacaca tattgtgaaa gaaactcatc ggcttgaaga aaccgtaaat
     6841 aaacaaccta ttattgttga tttttacgtg agctacgaac caatcaagtc gcttatatta
     6901 aagttagaac tataaaatgt ctttgacaaa aagtacattg atcctcttga tgctaataat
     6961 gatgcagcaa gtcagagggt ttacaattct gatatcagtg atgaacctat ttatacgctc
     7021 aataattatg caagagggag aactatagtg tttagcacaa gttataaatt ctaaatgggg
     7081 ttgtcctaga taagctagct taaatttcct ttaactaatt atttggcata gtgactaaaa
     7141 ttgagtctgc acagtaggtt aaaaccttat aatataagga tttaacccag atggtgcaag
     7201 cgtccacgct tgtgccagtt aattcctgtt ctgaaagtat ttcagtcata agataaaagc
     7261 ctaaatcagc caagtaaaat ttggtttatt tgggcttttg tttttggcac aagcgtggac
     7321 gcttgcgtca tcattttatt tatccatcca ttgctatcat ttcagtattt ctttggctta
     7381 tcacaagcgg ttaaatttta tcaacacttt gcaagtttta atgatttttg cgatctagat
     7441 cgaaaaagtt atattggctt gtggaattta attttgaata gggtattttt cttattcctt
     7501 tttaagttga gaaaggctat gagccgaaaa tataaattcc acgaaaagag cggtgcttat
     7561 tttgtcagtt ttgcaactgt ttattgggtt ggtgtgtttg tgagagagat ttattttcag
     7621 gtaattgttg atgccttaga ttactgcaga aaacataagg gaatgatttt gtatgcctat
     7681 tgtattatgc caactcatat ccatttatta tttcaagcag aaaatcaaaa tccttctgat
     7741 ttaatacgag atttcaaaac attcaccgct aaaatactta ttcagagaat taaagataat
     7801 ttgcaagaaa accgtcggga atggttgctg tggatgtttt ctcgggcggc tgaacgacgt
     7861 tgtaatgtaa aacaatatca attctggcaa catcataacc aacctattga aatctattcg
     7921 cagaaattct ttgatgaaaa gttaaattat attcatcaaa atccagtggt aagtggtttt
     7981 gtgtctgagc cttgggaatg gaaatataat tgaaataaac tgcttgtatt tttgcgatct
     8041 ctgtcgaaaa attgtgaatt tttacttgtc tgtcggagaa ttttgcgtaa attctgctta
     8101 ttatgtttta gttaaaggta ttctatgagt agataaccca aatgaaaata gcgatataac
     8161 ctatttctac ccagtaatta attcccgctt ttatgtatca gatcaaataa tttacattga
     8221 tttatcggta ttatctgtct ttagtttttt taattaagga gccttatatg aaattcaaaa
     8281 aattagcatt agcagcaatg ttaggtggct tatttgtaac agctaatgcg gcagaattac
     8341 ctaatatcac tattttagcg acaggcggaa cgattgctgg tagtcagcag aatgcaaata
     8401 gtagtgctta tcaagcaggg caattgaata tcgaaacctt aattgaagca gtgccagaaa
     8461 tgaaaacatt ggcgaatatc aaaggtgagc agattgtgaa aattggccca ctaaagcctt
     8521 gttagatgta ggctatcaag gtattgtcgt agcaggtgtt ggtaacggca atatgagtgc
     8581 ggaaaatctt gcattattta gaggaagcca acaatatttt taagattttt aataaacgtt
     8641 aaagcatata aaaaatggca taagtgagtc acttatgcca ttatttt
//
LOCUS       DANMCL010000105         7588 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.107, whole genome shotgun sequence.
ACCESSION   DANMCL010000105 DANMCL010000000
VERSION     DANMCL010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7588
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.107"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            152..670
                     /locus_tag="PXF40_002356"
     CDS             152..670
                     /locus_tag="PXF40_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein"
                     /protein_id="HDL5803643.1"
                     /translation="MQKKLFIAQIKQNLSELNVFSTDNIFLNSPYFSQQTGLVSVFIA
                     EIEKTVELLLNQTEVLYSEFYAEKLVKQVDALKNAVEKIQSKPESAQFHSSYQFSPNI
                     HRLAPNKRLQEYRKALRALNEKISWLVEQNLNTQNEATKQTLQNQITETEYRKMKCLK
                     AIEDLEQELLFK"
     gene            complement(674..747)
                     /locus_tag="PXF40_002357"
     tRNA            complement(674..747)
                     /locus_tag="PXF40_002357"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(713..715),aa:Cys,seq:gca)
     gene            complement(763..838)
                     /locus_tag="PXF40_002358"
     tRNA            complement(763..838)
                     /locus_tag="PXF40_002358"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(803..805),aa:Gly,seq:gcc)
     gene            complement(1048..2472)
                     /gene="lpdA"
                     /locus_tag="PXF40_002359"
     CDS             complement(1048..2472)
                     /gene="lpdA"
                     /locus_tag="PXF40_002359"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011272714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HDL5803644.1"
                     /translation="MSKEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYSTLGGI
                     CLNVGCIPSKALLHVAKVIEEAKNAVHNGVTFGEPTIDLDQVRAGKEAVVSKLTGGLA
                     GMAKARKVTVVEGLAAFTGPNTLVARDRDGNPTTITFDNAIIAAGSRPIQLPFIPHED
                     PRVWDSTDALKLKEVPKKLLIMGGGIIGLEMGTVYNALGSEVEVVEMFDQVIPAADKD
                     VVAIYTKQIEKKFKLMLETKVTAVEAKDDGIYVSMEGKACNDTKRYDAVLVAIGRVPN
                     GKLIDAGKAGVEVDERGFIRVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGMKHYFDPKVIPSIAYTEPEVAWVGKTEKECKQEGLNYEVAKFPWAASGRAIASEC
                     SEGMTKLIFDKDTHRVLGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNAKAKKR"
     gene            complement(2672..4582)
                     /gene="aceF"
                     /locus_tag="PXF40_002360"
     CDS             complement(2672..4582)
                     /gene="aceF"
                     /locus_tag="PXF40_002360"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HDL5803645.1"
                     /translation="MSKQINVPDIGSDEVSVTEVMVKVGDTISVDQSIINVEGDKASM
                     EVPAPEAGVVKEVLVKVGDKVSTGSPMLILESADAAPAQEAPKAEAAPAAPVATTSAV
                     VEVNVPDIGGDEVNVTEIMVKVGDSVEVDQSIINVEGDKASMEVPAPVAGVVKEILIN
                     VGDKVSTGKLIMKFETASAATAQSTPVAEAAPAQASASAIKDVNVPDIGGDEVNVTEI
                     MVKVGDSVSEEQSLITVEGDKASMEVPAPFAGVVKEILVKSGDKVSTGSLIMKFEVAG
                     AAPAPAAAQAASAPAPAPQAAAPAKADAAPAGQNQSGLSQEQVVASAGYAHATPVIRR
                     LAREFGVNLDKVKGTGRKGRIVKEDIQAYVKTAVQVFEKQGGTAAAATGAANGAGLGL
                     LPWPKVDFSKFGEVEEVELSRINKISGANLHRNWVMIPHVTHFDRTDITELENFRKEQ
                     NKEAEKRKLDVKITPVVFIMKAVASALEAFPRFNSSISEDAQRLTLKKYINIGVAVDT
                     PNGLVVPVFKNVNKKGIIELSRELMEVSKKAREGKLTASDMQGGCFTISSLGGIGTTH
                     FTPIVNAPEVAILGVSKSEMQPIWNGKEFEPRLMLPLSLSFDHRVIDGADGARFLSYI
                     NSVLADIRRLVM"
     gene            complement(4786..7443)
                     /gene="aceE"
                     /locus_tag="PXF40_002361"
     CDS             complement(4786..7443)
                     /gene="aceE"
                     /locus_tag="PXF40_002361"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005628834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HDL5803646.1"
                     /translation="MSENLRNDVDPIETQDWLASLDSLIREEGLERAQFIIEQVISQA
                     RAGGVALPTGVTTDYVNTIPVSEQPAYPGDHKIERRIRSAVRWNAIAAVLRSQKKDLD
                     LGGHISTFQSAATMYEVCFNHFFKAPTEKDGGDLVFFQGHAAPGMYGRAFLEGRITAE
                     QMDNFRQEAFTDGLSSYPHPKLMPEFWQFSTVSMGLGPVNAIYQARFLKYLENRGLKD
                     TSAQKVYAFLGDGEMDEIESKGALSFAGREKLNNLIFTISCNLQRLDGPVNGNGKIVQ
                     ELEALFTGCGWEVIKVLWGSGWDKLLEKDTSGKLKQLMMEVLDGDYLTFKSKNGAYVR
                     EHFFGRYPETAALVADMTDDEIWALRRGAHDSEKLYAAYAKAQKSDKPVVILAHQVKG
                     YRIPEAESKNTAHQSKKMSLDSLKGFRDYFELPLTDEQVESLEYVRFPEGSEEYNYLH
                     GQRKALNGYVPVRKPKFTVDFKVPELSEFQALLDEQPRGISTTMAFSRVLNTLLKDKN
                     IGQQIVPIIADEARTFGMEGLFRQIGIYNPHGQNYVPSDRDLVAYYREAKDGQVLQEG
                     INELGATASWVAAATSYSVSNLPMIPFFIYYSMFGFQRVGDMMWLAGDQLARGFMIGG
                     TSGRTTLNGEGLQHEDGHSHIQAGVIPNCVTYDPAFAFEVAVIVQDGIRRMYGENQED
                     IFYYITTLNEITEQPAMPAGAEEGIRKGLYKFETVEGKGKGHVQLLSSGAIMRHVRAA
                     AQILANDYGITADVFSAPSFNELGRDGADVARWNLLHPTETPRVPYVAQVLQDLPTVA
                     STDYMKMYAEQIRAYVPSKHYHVLGTDGFGRSDSRANLREHFEVDERYVVVAALAQLA
                     KEGTVENKVVAEAITKFGLNVDRINPLYA"
BASE COUNT         2166 a         1703 c         1409 g         2310 t
ORIGIN      
        1 ttgatattta atttcttttt tgcctgtttt tcacgcacga attgtaagaa attagtaaaa
       61 atcaaccgct tgtacgcaaa gtgttttgct ttaaaataga agttatatga aataaaattc
      121 acttaaattt tctttattga taacatcaac catgcaaaaa aaacttttta tcgcccaaat
      181 aaaacaaaac ctctcggaat taaatgtatt ttcaacggat aatatttttc tgaattcacc
      241 ctatttctca cagcaaaccg gtttggtgag tgtgttcatt gctgaaattg aaaaaacagt
      301 tgagctatta ttgaaccaaa ctgaggtgtt atatagtgaa ttttacgctg aaaaattggt
      361 taaacaagtt gatgcattaa agaatgccgt agaaaaaatc caaagtaagc cagaatcagc
      421 tcaattccat tcttcctatc aattttctcc aaatattcat cgtttagcgc ccaacaaacg
      481 cttacaagaa taccgtaaag cgttacgtgc attgaacgag aaaattagct ggttagttga
      541 gcaaaattta aatacgcaaa atgaagcaac taaacaaacc ctgcaaaatc aaattacaga
      601 gacagaatat cgcaaaatga aatgtttaaa agcaattgaa gatttagaac aagagttgct
      661 atttaaatag tgatggaggc gtgtcccgga gtcgaaccga gctacatgga tttgcaatcc
      721 agtgcataac cgctttgcta acacgccata agatttggaa attggagcgg gaaacgaggc
      781 tcgaactcgc gaccccgacc ttggcaaggt cgtgctctac caactgagct attcccgcat
      841 ctgaattccc acaacattgc gctgtggaac gaggtgcatt ttacggattt atcattttat
      901 gtcaatgcta aatttaacat tctagattca aatgctgaaa aaaaactcac tattcaatag
      961 tttagtttta aaaataatca agcggttgta ttttgcaaaa aatttacaaa atacaaccgc
     1021 ttatttttta gagattaaat aatctgatta acgctttttg gctttcgcat ttggtaagtc
     1081 tgtaattgaa ccttcaaata cttctgccgc taatcctacc gattcgtgta acgttgggtg
     1141 agcatgaatg gttaatgcga tatcttcagc atcacagccc atttcgattg caagaccgat
     1201 ttcgcctaat aattcgccac cattgctacc aacaatcgca ccacctaata cacggtgagt
     1261 atctttatca aaaattaact tggtcatacc ttctgagcat tcagaagcaa tcgcacgacc
     1321 tgaagcagcc caagggaatt tcgccacttc gtagttcaag ccttcttgtt tacactcttt
     1381 ctcagtttta ccaacccaag ccacttctgg ttcagtataa gcgatggacg gaatgacttt
     1441 cggatcgaag taatgtttca ttcctgcaat cacttctgct gccacgtgtc cctcgtgtac
     1501 acctttgtga gctaacatcg gctggccgac aatatcacca atagcaaaga tgtgtggcac
     1561 attggtacgc atttgtttat ctacacgaat aaagccacgc tcatctactt ccactccagc
     1621 tttaccggca tcaattaatt taccgtttgg cacacgtccg atagcgacta ataccgcatc
     1681 ataacgttta gtatcgttgc aagccttacc ttccattgat acatagatac cgtcatcttt
     1741 agcttctact gcggttactt tggtttcaag cattagcttg aattttttct cgatttgttt
     1801 ggtgtaaatc gctacaacat ctttatctgc agcaggaatt acttggtcga acatttcaac
     1861 cacttccact tctgaaccaa gcgcgttata taccgttccc atttctaaac cgataatacc
     1921 accacccata ataaggagtt ttttcggtac ttcttttaat ttaagagcat cggttgaatc
     1981 ccaaactcgt gggtcttcgt gtggaataaa tggtagttga atcggacgag aacctgctgc
     2041 gataatcgca ttatcgaacg tgatagttgt aggattgccg tcacgatcac gagcgactaa
     2101 cgtattcgga ccagtaaatg cagccaagcc ttctactact gtcactttac gagccttagc
     2161 cattcctgct aagccaccgg ttaattttga aacaacggct tctttaccag cacgtacctg
     2221 atctaaatca atcgttggct caccaaaggt cacaccgttg tgtactgcat ttttagcttc
     2281 ttcaattact tttgcaacgt gtaataatgc tttagaaggg atacaaccta cgtttaagca
     2341 aataccacct aaggttgaat aacgctcaac aattactgtt tctaagccta agtcggcaca
     2401 acggaatgcc gctgagtaac ctgctggacc tgcaccaagt acgacaactt gggttttaat
     2461 ttctttgctc atagtttttc ctctttttat tccccccctt tagcaaagag gggtaaggga
     2521 gatttggcag aatataaagc gaagtgagag agcaatcaat caaacacaaa tttctaccaa
     2581 ataatttatt ctcttcgtaa attacgtcta tcaaatctcc ccctacccct cttttctaaa
     2641 gagggacttt tttaggagga gctttaccga attacatcac taaacgacga atatctgcca
     2701 acacgctatt aatatagctt aagaatctcg caccatcagc accatcgatc acacggtggt
     2761 cgaatgataa tgaaagcgga agcattaagc gtggttcaaa ctctttgcca ttccaaatcg
     2821 gttgcatttc agatttagac acacctaaaa tagccacttc cggtgcattc acgattggcg
     2881 taaagtgcgt tgtaccaata ccgcctaaac ttgaaattgt gaaacagcca ccttgcatat
     2941 cagatgctgt caatttacct tcacgggctt ttttcgagac ttccattaat tcgcgagaaa
     3001 gttcgataat gccttttttg ttcacatttt tgaacaccgg caccactaaa ccgtttggcg
     3061 tatcaaccgc aaccccgata ttgatgtatt ttttcaaggt taaacgttgt gcatcttcag
     3121 aaattgagct gttgaaacga gggaaggctt ctaatgcact tgccactgct ttcataatga
     3181 agaccacagg ggtaattttc acgtctaatt tacgtttttc cgcttcttta ttttgctctt
     3241 tacggaagtt ttctaactcg gtaatgtctg tgcgatcgaa atgtgtaacg tgaggaatca
     3301 ttacccagtt acggtgtaag ttcgcaccgg aaatcttatt gatacggctt aattcaactt
     3361 cttcaacttc accaaacttg ctgaaatcta ctttcggcca cggtaataaa cctaagcctg
     3421 caccgtttgc cgcacctgtt gctgccgctg ctgttccgcc ttgtttttca aatacttgaa
     3481 cagccgtttt aacgtatgct tgaatatctt ctttaacgat acggccttta cgacctgtac
     3541 cttttacttt gtctaggttt acaccaaact cacgagctaa acggcgaatt accggtgttg
     3601 cgtgtgcata gccagctgaa gccaccactt gttcttggct taaacctgat tggttttgac
     3661 ctgccggagc tgcgtcagct ttcgccggag ctgctgcttg tggagcagga gcaggagctg
     3721 aagccgcttg agcagccgcc ggagccggtg ccgcacccgc tacttcaaat ttcataatta
     3781 atgaaccggt tgaaacttta tcacctgatt tcactaaaat ttctttcacc acaccggcaa
     3841 atggagccgg aacttccatt gaagctttat caccttcaac cgtgattaaa gattgttctt
     3901 ctgaaacaga atcacccact ttaaccataa tttcagttac gtttacttca tcaccaccga
     3961 tgtccggtac atttacatct ttaatcgctg atgccgaagc ttgagctgga gcagcttccg
     4021 caaccggtgt agattgtgct gtagctgcgg aagccgtttc aaatttcata atcaatttac
     4081 cagttgaaac tttgtcaccc acattgatta agatttcttt tactacgccg gcaaccggtg
     4141 caggcacttc cattgaggct ttatcacctt caacgttgat gatagattga tccacttcaa
     4201 cgctatcacc tactttaacc ataatttcgg ttacgttaac ttcatcgcca ccgatatcag
     4261 gtacatttac ttcaacaacg gctgaagttg ttgctactgg agcagcagga gctgcttctg
     4321 cttttggtgc ttcttgagca ggagcagcat ctgctgactc taaaattaac attggtgaac
     4381 cggttgaaac tttatcaccc actttcacta aaacttcttt taccacacct gcttcaggag
     4441 ccggcacttc catagaggct ttatcgcctt ctacgttaat aattgattga tctactgaaa
     4501 tagtatcacc aacttttacc atcacttcag tcacactgac ttcatccgaa ccgatgtccg
     4561 gcacattaat ttgttttgac attttgaaat ccttcttgag ttaccccctc tcccattgtg
     4621 ggagggacag atttttcttt gtaagaagaa aaatcaggga gaagggaatg caagcggttg
     4681 attttctcaa catttttgca aataaaacta ataccctctc tgctaaaagt ttctaaacga
     4741 aacctttagc tgtctctctc ccatcaaggg agagagtatt agaaattacg catataatgg
     4801 gttaatacga tctacattta agccgaattt agtaatagct tccgcaacca ctttgttttc
     4861 aactgtacct tctttcgcta attgagcgag ggctgcaact actacataac gctcatcaac
     4921 ttcgaagtgt tcacgtaagt ttgcacggct gtctgaacga ccgaaaccgt ctgtacctaa
     4981 cacgtgatag tgtttacttg gtacataagc acggatttgc tctgcgtaca ttttcatata
     5041 gtcggttgaa gcaacagtcg gtaaatcttg taacacttga gcaacgtacg gtacacgtgg
     5101 tgtttcagtt gggtgtaata agttccaacg agccacatct gctccatcac gacctaattc
     5161 attgaatgat ggtgctgaga atacatctgc tgtaatgccg tagtcattcg cgagaatttg
     5221 tgcagctgca cgcacgtgac gcataattgc acctgagctt aataattgta cgtgaccttt
     5281 acctttaccc tcaacggttt caaatttata taaaccttta cggatacctt cttccgcacc
     5341 tgccggcatt gccggctgtt cggtaatttc atttaaggta gtaatgtagt agaagatatc
     5401 ttcttggttt tcaccataca tacgacgaat accgtcttga acaataaccg caacctcaaa
     5461 ggcaaatgca gggtcataag tgacgcagtt cgggattaca cctgcttgaa tatggctatg
     5521 accatcttcg tgttgtaaac cttcaccgtt taatgttgta cgacctgaag taccaccaat
     5581 cataaagcca cgagctaatt ggtcaccggc taaccacatc atatcgccta cacgttggaa
     5641 accaaacatt gagtagtaga tgaagaatgg gatcatcggt aagttgctaa cagaataaga
     5701 agtcgctgct gccacccaag aggctgttgc acctaactca ttgatacctt cttgtaacac
     5761 ttggccatct tttgcttcac ggtagtaagc tactaaatca cggtctgacg gtacatagtt
     5821 ttgaccatgt gggttataaa taccgatttg acggaataaa ccttccatac cgaaagtacg
     5881 ggcttcgtcc gcaataatag gtacgatttg ctgaccgata tttttatctt tcaataaagt
     5941 attcaataca cgagagaacg ccattgtggt tgaaatacca cgtggttgct catccaataa
     6001 tgcttggaat tcgcttaatt caggcacttt gaaatcaacc gtaaatttcg gtttacgtac
     6061 aggcacataa ccgtttaagg ctttacgttg tccgtgtaag tagttgtact cttcagaacc
     6121 ttcagggaat cttacatact ctaggctttc tacttgctca tcggttaatg gtagctcgaa
     6181 gtagtcacgg aagcctttta agctgtctaa tgacattttt ttcgattggt gagcagtatt
     6241 tttactttcc gcttcaggaa tacggtagcc tttcacttgg tgagctaaaa ttacaactgg
     6301 tttgtccgat ttttgtgctt ttgcataggc tgcataaagt ttttcagaat cgtgtgcacc
     6361 acggcgtaat gcccaaattt catcgtctgt catatcagca actaatgctg cagtttcagg
     6421 gtaacgaccg aagaagtgtt cacgaacgta agcaccattt ttggatttga aggttaaata
     6481 gtcaccatca agcacttcca tcattaactg tttaagtttg cctgaagtat ctttttcaag
     6541 cagtttatcc caaccactac cccataacac tttaatcact tcccagccac aaccggtaaa
     6601 gagtgcttct aattcttgca cgattttgcc gttaccgtta accggaccgt ctaaacgttg
     6661 taagttacag ctaatagtga agattaagtt atttaatttt tcacgaccgg cgaatgataa
     6721 tgcaccttta gattcgattt catccatttc gccatcgcct aagaatgcat atactttttg
     6781 agccgaagta tcttttagac cacggttttc taaatatttt aagaaacgag cttggtaaat
     6841 agcatttacc ggtcctaaac ccatagatac ggtagagaat tgccaaaatt caggcattaa
     6901 tttagggtgt gggtaagaag ataaaccgtc tgtaaatgct tcttgacgga agttatccat
     6961 ttgttctgcg gtaatacgac cttctaagaa cgcacgacca tacatacccg gtgctgcgtg
     7021 gccttggaag aacactaaat caccaccatc tttttcggtt ggtgctttga aaaagtggtt
     7081 aaaacacact tcatacatag ttgccgcaga ttggaaagtt gaaatatgac cacctaagtc
     7141 aagatctttc ttctggctac gaagtactgc cgcaatcgca ttccaacgta ccgcagaacg
     7201 aatacgacgt tcgattttat gatcacccgg ataagctggc tgctcggaaa cagggatagt
     7261 attgacataa tctgttgtta cgcctgttgg taatgccacg ccacctgcac gagcttggct
     7321 aataacttgt tcaatgataa attgagcgcg ctctaaacct tcttcacgaa ttaatgaatc
     7381 gagtgatgct aaccaatcct gagtttcgat tggatctacg tcatttctta agttctctga
     7441 catagtattc ttccttataa attaacgatt gaggtgataa ataacaaaat tttaacaaat
     7501 tttgtttgtt tggtgatttt tagaccaatt cttatcgaaa aaatttcagt aaaacaacaa
     7561 tttccgaatt aaacctctct tgaggcat
//
LOCUS       DANMCL010000106         7587 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.108, whole genome shotgun sequence.
ACCESSION   DANMCL010000106 DANMCL010000000
VERSION     DANMCL010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7587
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.108"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(199..2547)
                     /locus_tag="PXF40_002362"
     CDS             complement(199..2547)
                     /locus_tag="PXF40_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005612269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HDL5803647.1"
                     /translation="MLISAQFSPLVWAENNDVAVLDEVSVVGSTPSISQGSEVTLLKV
                     SDKIIAGKEFKKRSATLGNALASELGVHSNPFGGGASKPIIRGQEGARIRILQNGSDV
                     IDMSNLSPDHAVVADSLLADQVEILRGSSTLLYASSSPVGIVNVVDKRIPTAIPEKGY
                     EVELNSRFDTAAKEKVGALGATFGIGNHIAVRVEGLSRHSDNYRVPGINLGERLNYVP
                     DTYNKSKVGTLGLSFVGERGYIGASYSKRRDNYGLPGHNHKFDFCTGHIYGNKRDKYA
                     YTYLYPHLIGEENIGSNPHFHCGTNHAEDGTHSHDNPFGHAHDHTHKGPWVDLESKRI
                     DVKAELRQPFKGVDKIKASYADADYYHDEKDAGVLATRYHKQLKKDQDYGKPVNIFKN
                     RGKNTRLEVYHAPLGGLTGVWGVQYQTQKSSMNAPKDREVKFPLVENTNKQFSLFGVE
                     QYMWDSVAVELAGRMEKQKIEIEYDRNEIKRLQEHYRISGGKQVEPDLSPYDETAYAY
                     SGTLNWFFHPDYQLSFTASHNERLPTPMELYYHGQHIATNSFEYGNKDLKKEQSNNVE
                     LGLGYQAERIGYKVSVYYNHFKNYIYNENLFRENQLFMRRYNQAKARFYGVEAEASYR
                     FNDQYQATIFGDMVRGWLTNLPPLKINSDYSVFKDYLPENVEKGKDYLLYRADQNTPR
                     TPPMRLGFRFNAEFTPNWSGDLELIRTFTQRRTSQLEYITEGNTMLNVGLSYSNKWKE
                     LDYKISLNGTNLLNQPVYIHTSYHQFVPQMGRNFMLGMEMKF"
     gene            2732..4177
                     /locus_tag="PXF40_002363"
     CDS             2732..4177
                     /locus_tag="PXF40_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803648.1"
                     /translation="MRSTFKLTLAALAVSIVLSGCKSSQGPSIVADSPPPKEITATDG
                     NDKEKTDNKEKKSAQPNKSDPQPDKPANAKDPVKPDAETNKPSKKDKEYTPPATEKID
                     NSSVQPDKMVPNPIENKENDSNKPNPKESDSDNNDKVTEGNKPNAPTETVNKDKEAEK
                     SKKENKEDSSNNTPNINFDGAKPIDTDSKGSPYRVINLNPRKSVVNASAMQKVDFDSF
                     TDESVENSPFVSSDTEKEYNNTLVFGLGAGDKDSYFKNLNQKGDKHLGIHSGVYEDAN
                     LEGNTKKINYLYVNQPYSSYGALFTDQKDSHLFNVRLTAGRENGDSYAEYGVFTQSGK
                     EAKWNDNLIGDATYKGQAIARVIRQVNGEQVAGIPQFDGDVTLNLHLSKEWNESKLNG
                     KIDSQSVGVITLKESEIANPTALRSNIGFGEEVIVENKENLVGDYAVDFTGPQLEEAV
                     GVVELENEAETFSENEVIKYNAVFGVSKAAK"
     gene            4241..5653
                     /locus_tag="PXF40_002364"
     CDS             4241..5653
                     /locus_tag="PXF40_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5803649.1"
                     /translation="MKKIALLALFPMMLFARDPNTTQAYIEHTAQPTTTPQRVKIEKS
                     VPIFNETELRANQLLTEKLLIQAIYSRRLANMEKLTAIYRDFTHIDPVLLRYAQGKIA
                     LLKGDYAQAIQHFQTILAKQPKLNTVRIELAIALLYDQQLNQAQAQFEKAKSAEHLPP
                     KVHALIEQYQQHLAKKQEWKFSFSANYVRDGNINRTSKQPNIEQTGYVKQPNLLPQTA
                     HGVHYAFGLQRDFNLFDSHYVSFDNQTQGELYWDNHDYDEITNRTLFGYAYKKSDQTT
                     RLLPFYEKRWKHHRSERWTNGIRLEHAQWFSPHWQLATALEYGKKRYFDLPIYNGSYK
                     LASATLLWLRNPQQFFFVGTDFNQDKTQLKQYSSDTKGIRFGWQREWQALELSSRLTL
                     GYTDRRYKDTAILGGKLNLGRIRHDRVQSANLTLWKRDWHWLGLMPKLQFSYAKHRSN
                     LPSLYAYTDKNINLIIESRF"
     gene            complement(5903..6226)
                     /locus_tag="PXF40_002365"
     CDS             complement(5903..6226)
                     /locus_tag="PXF40_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin"
                     /protein_id="HDL5803650.1"
                     /translation="MQKAYQIYTHSEREKVTEAKLELGKVETRLRNEGKTKEEIAQHP
                     EYLQLKRDLNDKQQTFDNAYGTGSKTKRAVDAVTAALQGLAAKDSGQAAVGLASPYLN
                     EQIKK"
     gene            complement(6195..6722)
                     /locus_tag="PXF40_002366"
     CDS             complement(6195..6722)
                     /locus_tag="PXF40_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5803651.1"
                     /translation="MRDKNKERQQTLERYQELYDQDPELRVIAANSEGDLDLLQETFF
                     VKGELTITDSTPKEKWNWLHMCNLNSYSPSPLSVVEFYIKHGVDVNAQDCYGMTPLHY
                     AMRAKNVDAAIALLNAGADPNIENKDQVIPLSMIGAVPKEIELIEHDISEVKETQELV
                     KGIGEIAEGLSDLHA"
     gene            complement(6724..6936)
                     /locus_tag="PXF40_002367"
     CDS             complement(6724..6936)
                     /locus_tag="PXF40_002367"
                     /inference="COORDINATES: protein motif:HMM:NF025767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH/ENDO VII family nuclease"
                     /protein_id="HDL5803652.1"
                     /translation="MYCWEHRRLSLAAKELNWSQKQFNDYVNARPENFRLENISENRS
                     HKNEMPGKDNIKSIIDDMKKFQQIGK"
     gene            complement(6951..7490)
                     /locus_tag="PXF40_002368"
     CDS             complement(6951..7490)
                     /locus_tag="PXF40_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HDL5803653.1"
                     /translation="MNELYEKYKDEPSMLVAIADGEGNIGVLEDIFLYKKQLAFSYVT
                     PLERWNWLHQCNLNSYAPAPLSVIEFYIQNGVEINAQDCYGMTPLHYAMRAKNVDAAI
                     ALLNAGADPNIPNQDNLIPLSMIGYLPDRLDVLELMLEKGANVHFLVNKNETILESYK
                     PTEMEPNLAPIYELMLKYA"
BASE COUNT         2282 a         1655 c         1395 g         2255 t
ORIGIN      
        1 taataaaggg ataaagttaa ttgtcttatt taacaacaaa caggaaattt tggtaagctc
       61 cgaaaataac aagaaaggaa aaacagcact attttatcca aattaccaat acctgagttt
      121 taaacaagcg gttattttta gccgtttttt tgcaaaattt gaagaaaaaa taaccgcttg
      181 tcttgttatg tcgagaactt aaaatttcat ctccattccc aacataaaat ttcgtcccat
      241 ttgtggtaca aattggtgat acgaagtgtg gatatacacc ggctgattca gtaagtttgt
      301 gccgtttaga ctgattttgt aatccagctc tttccactta ttgctatacg acaacccgac
      361 attcaacatc gtattacctt cggtaatata ttccaactgg ctcgtacggc gttgggtaaa
      421 ggtgcggatc agctctaaat cccccgacca atttggggta aattccgcat taaagcgaaa
      481 acctaaacgc attggcggtg tacgaggggt gttttggtca gcccgatata gaagataatc
      541 tttccctttt tccacatttt ccggcagata atctttgaac acactataat cgctatttat
      601 cttcaatggt ggtaaatttg ttagccagcc tcgtaccata tcgccgaaaa tcgtggcttg
      661 gtattggtcg ttaaagcggt agcttgcctc tgcttctacc ccgtaaaaac gggcttttgc
      721 ctgattataa cggcgcataa atagctgatt ttcacggaaa agattttcat tgtagatgta
      781 gtttttaaag tgattgtaat aaacactcac tttatagcca atacgttcag cttgatagcc
      841 caagcccaac tccacattat ttgactgctc ttttttcaag tctttattgc cgtattcaaa
      901 cgaattagta gcaatatgct gcccgtgata atacagctcc attggcgttg gcaagcgttc
      961 attgtgcgag gcagtaaacg aaagctgata gtcagggtgg aagaaccagt taagcgtgcc
     1021 ggaataggca taagccgttt catcataggg tgaaagatct ggctcaacct gtttgccgcc
     1081 actgatacgg tagtgttctt gtaaccgttt gatttcattg cgatcatact caatctcaat
     1141 cttctgcttt tccattcgtc cggcaagctc aacagcaacg ctatcccaca tatactgctc
     1201 aaccccaaac aggctgaact gtttattggt attttcaacc agcgggaatt tcacttcgcg
     1261 atctttcggc gcattcatac tgcttttttg cgtttgatac tgaacacccc atacaccggt
     1321 taagccacct agcggtgcgt gatagacctc caagcgggta tttttgcccc gatttttgaa
     1381 aatattcacc ggcttgccgt aatcctgatc ttttttcagc tgtttatggt aacgggtggc
     1441 aagcacgcct gcatcttttt catcgtggta ataatcggca tcagcatagc ttgccttaat
     1501 tttatctacg cccttaaacg gctggcgtag ctcggctttc acatcaatcc gttttgattc
     1561 taaatccacc cacgggcctt tgtgagtgtg atcgtgggcg tgtccgaacg ggttatcgtg
     1621 gctgtgtgtg ccgtcctcgg cgtggttggt tccacagtgg aagtgcggat tgctcccaat
     1681 attttcctca ccaatcaaat gcggatagag ataggtataa gcgtatttat cccgcttatt
     1741 accgtagata tgaccggtac agaaatcaaa tttatggtta tgccccggca agccataatt
     1801 atcccgccgt ttgctgtatg aggcaccaat atagcctcgt tcaccgacaa aggataagcc
     1861 caacgtgccg actttggatt tattgtaagt gtccggcaca tagtttaagc gctcgcctaa
     1921 gttgatcccc ggcacacggt agttatcact atgacgactc agcccttcga ctcgcaccgc
     1981 aatgtggtta ccgatgccaa aggttgcccc taatgcgccg actttctctt tggcggcggt
     2041 atcaaaacgg ctattgagtt caacctcata tcccttttca ggaatagcgg tcggaatacg
     2101 tttatccacc acatttacaa ttcctaccgg cgaactgctg gcataaagca aggtgctgga
     2161 accacgcaag atttcgacct gatcggcaag cagtgaatca gcaacaacgg cgtgatcagg
     2221 agataggttc gacatatcaa tcacgtctga accgttttgc aaaatgcgaa ttctcgcccc
     2281 ttcctgccca cgaataatcg gcttactcgc tccgccacca aacgggttac tatgcacgcc
     2341 taattctgac gccaacgcat tacccagcgt tgccgaacgc tttttaaatt ccttacctgc
     2401 aataatttta tcactgactt ttagcaaggt aacttcactc ccctgcgata tacttggagt
     2461 gctgccaacg accgaaactt catctaacac cgctacatcg ttattttccg cccaaacaag
     2521 cgggctaaat tgagccgaaa tcagcaatgc caatcctgtt ttcttaaaca caatctttct
     2581 ccttaaaaaa attaaggata ataaggtact gcaaaatatg agtctttaca ataataacca
     2641 taaaaaaatt atatttttta aattttccct attgccaaac aggaaatata tccattaaaa
     2701 ttttatggat ttaatctgac ggagacaaaa tatgcgttct acattcaaac ttactcttgc
     2761 agctttagct gtttctattg ttttaagtgg ctgtaaatct agccaaggtc catctattgt
     2821 tgcagacagc cctccaccta aggaaataac agctactgat ggcaacgata aagagaaaac
     2881 cgataacaaa gagaaaaagt ctgcgcaacc aaataaatcc gatcctcaac cggataaacc
     2941 tgctaacgca aaagacccag taaaacctga tgcggagaca aataaaccaa gtaaaaaaga
     3001 taaagaatat acaccacctg ctactgaaaa aatcgataac tcatcagtac agccggataa
     3061 aatggtgcct aatcctatcg agaataagga aaacgacagt aataaaccta accccaaaga
     3121 aagcgatagc gataataatg acaaagtcac tgaaggcaat aaaccaaatg ccccaacaga
     3181 aacagtaaat aaagataaag aagctgagaa aagtaaaaag gagaataaag aggactcaag
     3241 caataatact cctaacatta attttgacgg ggcaaagcct atagatacag atagtaaagg
     3301 tagcccgtac cgagtaataa acctaaatcc gagaaaaagc gtagtaaatg caagtgctat
     3361 gcaaaaagta gatttcgact cttttacgga tgaatctgtt gaaaattcac catttgtcag
     3421 tagcgatact gaaaaagaat acaataatac acttgttttt gggcttggtg ccggagataa
     3481 agattcttat tttaagaact taaatcaaaa aggggataaa catttaggta ttcatagtgg
     3541 cgtgtatgaa gatgcgaatt tagaaggtaa tactaaaaaa attaactatc tctatgtaaa
     3601 tcaaccttat tcgagctatg gtgctttatt tacggaccaa aaagacagcc atttattcaa
     3661 cgttcgtctg accgctggta gagaaaatgg agatagttat gccgaatatg gtgtattcac
     3721 acaatcagga aaagaagcta aatggaatga taacctgatt ggtgatgcca cttacaaagg
     3781 tcaagctatt gctcgcgtta ttcgtcaggt aaatggggaa caagtcgcag gtattcctca
     3841 atttgatggt gatgttacat taaatttaca cctttccaaa gaatggaatg aaagtaaact
     3901 aaacggcaaa attgatagcc aaagtgttgg ggtaattaca cttaaagaaa gtgaaatagc
     3961 taaccctacc gcactccgct caaatattgg ttttggagaa gaagtcatag ttgagaataa
     4021 agagaatctt gtgggtgatt acgctgtcga ttttaccggg cctcagcttg aagaggcggt
     4081 aggcgttgtt gaattagaaa acgaagccga gacattctct gaaaatgaag tcattaaata
     4141 caatgcggta tttggcgtaa gcaaagcggc gaaatagtat tttttgtatc ttacaaaggg
     4201 ctgttaagcc cttttatttt tattatttta aggataaaaa atgaaaaaaa ttgccttact
     4261 ggcacttttc ccaatgatgt tatttgcccg agatcctaat actacacagg cttatattga
     4321 gcatactgca cagccaacta caacccccca aagggtcaag atcgaaaaat cagtgcctat
     4381 ttttaacgaa actgaattac gtgctaatca attattgacc gaaaagctac ttatccaagc
     4441 tatttatagt cgtaggcttg ctaacatgga aaaattaact gcgatttatc gggattttac
     4501 ccacattgac ccggttttac tgcgttatgc acaaggtaaa attgccctac tgaaaggcga
     4561 ttacgcacag gcaattcagc acttccaaac cattcttgcc aaacaaccca aactaaacac
     4621 tgtaagaatt gagctggcga ttgctctatt gtacgatcag caacttaatc aagcccaagc
     4681 acaatttgaa aaagccaaaa gtgccgaaca tctaccgcct aaagttcacg cattaattga
     4741 gcaatatcag caacatctgg caaaaaaaca ggaatggaaa tttagttttt cagccaatta
     4801 tgtgcgagac ggcaacatta accgaacctc gaaacagccg aacattgagc aaaccggcta
     4861 tgtaaaacaa cctaatttgt tgccccaaac cgcacatggt gttcactatg cgtttggatt
     4921 acagagagat ttcaacctgt tcgactcaca ctatgtgagt tttgacaacc aaacccaagg
     4981 tgaactttat tgggataacc acgattatga tgaaattacc aatcgcacct tgtttggata
     5041 cgcttacaaa aaatccgacc aaaccacccg cttgttaccg ttttatgaaa aacgctggaa
     5101 acatcaccgt tcggaacgct ggacaaacgg aattcgactt gaacacgcac aatggttttc
     5161 accgcattgg caactcgcca ccgcattgga atacggcaaa aaacgttatt ttgatttgcc
     5221 gatttataac ggcagctaca aacttgcctc tgccacattg ctttggttac gcaatccaca
     5281 acaatttttc tttgtcggca ctgatttcaa tcaagacaaa actcagttaa aacaatatag
     5341 ctctgatact aaaggcatac gctttggctg gcaacgagaa tggcaagccc tcgagctttc
     5401 cagtcgcctc acgcttggct atactgacag acgttacaaa gacaccgcta tattgggagg
     5461 aaaacttaat cttggcagaa tccgccatga ccgtgtgcaa agtgctaacc tcacgctttg
     5521 gaaacgagat tggcactggc tcggcctgat gccgaagctg caatttagtt acgccaaaca
     5581 ccgtagcaac ctgccgagcc tctatgccta caccgataaa aacatcaatt taattattga
     5641 aagtcggttc tagctccata aaaacaacaa gcggttaaaa ttcctagaaa ttttgcaaat
     5701 tgcaaaaaat gtagaaaatt taaccgcttg tatctatact gcagcttctt ttccttcagt
     5761 ataaattaat atacaccgtt gcaacaataa tggctgctcc ctgtcatcac cttgaactga
     5821 aaattgctca aggtggatat gactatcgca gccgcttcca ccgcacccag taatgtatgg
     5881 gcaagcaggt tggcttgggt atctactttt taatttgttc gttgagatat ggcgaagcta
     5941 agcctactgc tgcttgtcct gaatctttcg ccgctaaacc ttgtaaggct gccgtcaccg
     6001 catccaccgc acgcttggtt ttgctgcccg tgccgtaggc gttatcaaaa gtctgctgtt
     6061 tatcgtttaa atcccgtttt aattggagat attcaggatg ttgagcgatt tcttcttttg
     6121 tttttccctc atttctcaaa cgggtttcca ctttgcccaa ttccagcttc gcttccgtca
     6181 ctttttcacg ctcactatgc gtgtaaatct gataagcctt ctgcaatctc gcctatgccc
     6241 ttcaccagct cctgtgtttc tttcacctca ctaatatcgt gttctattaa ctctatctct
     6301 ttaggaactg ctccaatcat agacaatgga ataacttgat ctttattttc aatattcgga
     6361 tctgcccccg catttaataa tgctatcgct gcatcaacat tctttgccct cattgcataa
     6421 tgtaaagggg tcattccgta gcaatcttgg gcattaacat ctaccccatg tttaatgtaa
     6481 aattcgacta cagaaagagg agatggtgaa taactattta agttacacat atgtagccag
     6541 ttccattttt cttttggtgt gctatccgta atagtcagtt caccttttac gaaaaatgtt
     6601 tcttgtaaaa gatcgagatc gccttctgag tttgctgcaa taactcttaa ttcaggatct
     6661 tgatcatata attcttgata acgttctaat gtctgctgac gttctttatt cttatctctc
     6721 attttacttt cctatttgtt ggaatttttt catgtcatcg attattgatt taatattatc
     6781 tttccccggc atctcattct tatgactccg attttcagat atattttcta atctgaaatt
     6841 ctccggtctc gcattaacat aatcattaaa ttgtttttga ctccaattta attcttttgc
     6901 cgctaatgat aatcggcgat gttcccagca atatatattc tatgcatgca ctaagcatat
     6961 ttcagcatta gttcatatat aggtgctaaa ttaggctcca tctctgttgg tttatagctt
     7021 tccaatatcg tttcattttt attaactaaa aaatgtacat tcgcaccttt ctctaacata
     7081 agttctaaaa catctaatct atcaggtaaa taccctatca ttgataaagg tattaaatta
     7141 tcttgatttg gaatattcgg atctgccccc gcatttaata atgctatcgc tgcatcaaca
     7201 ttctttgccc tcattgcata atgtaaaggg gtcattccgt agcaatcttg ggcatttatt
     7261 tccactccat tttgtatata aaattcaatc acagaaagtg gtgctggtgc ataagaatta
     7321 agattacatt gatgtaacca attccatctt tctaatggtg taacataaga gaatgctaat
     7381 tgctttttat ataaaaaaat atcttctaat actccaatgt taccttcgcc atctgcaatg
     7441 gcaactagca ttgagggttc atctttatat ttttcatata attcattcat attatttacc
     7501 ttcttttaag aatttttcca tatcggattt gattcgttga atatcatgtt ttcctggcat
     7561 ctcattctta tggctacgat tttcaga
//
LOCUS       DANMCL010000107         7530 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.109, whole genome shotgun sequence.
ACCESSION   DANMCL010000107 DANMCL010000000
VERSION     DANMCL010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7530
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.109"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1995
                     /locus_tag="PXF40_002369"
     CDS             <1..1995
                     /locus_tag="PXF40_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5803654.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAGSFGRGLMGAGVGIAAGAAMARQPARNQMEFDRQLAMVANTAFSDRDVKGRI
                     DGKRELLDAVQKAVSVGGGSKEEALSSLDALLASGAVSTETALNLLPTLQKGAVATGA
                     SANDMAQIAISSMQQFGIKEEDIGRVLDMAVAAGQAGSFELADMASWLPQQMAAAKQA
                     GLSGIEGFERLLIANQQARVTAGTSNEAGNNLVNLLGKITAKETNERFKNIEYKDPKT
                     GKTKAIDFAKSMEHYKGKGQDSLQAFMSIMDDVVGSDKRYQELQAKLKTAKGEEQKRL
                     FNELTNLVEGTAIGEIISDRQALMALLGIKNNVQLGEKVQKDIQNSEGAVETSHAVIR
                     DTNAHKVESLKNTTEFAQMKNFEKVNGVLGTLAELLNKYANEYPNLTQFLSGATDAVK
                     IFGAALAASSVLDLLTGKKDKGGLIGDVLDKSSKASGGKGKVGKLLSVGGSFASVAGV
                     ATMLHGDQAPMSEERKAELRDPNYQARKMYEYKKEILGSRFHSFFRSNETLEQYRKDV
                     SAYEAKQKNSNTMGAVQGVLSTIPSLQELRPKVDSVTQTLSTYQADFQAFGATISAGI
                     EAGLASQSHTIANQITVELDGSVVAEKVAEYQFNFNKRMA"
     gene            1995..3287
                     /locus_tag="PXF40_002370"
     CDS             1995..3287
                     /locus_tag="PXF40_002370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HDL5803655.1"
                     /translation="MSGWTMPIQQASFKGVRFDVLAVDDSFERAVVEHAYPFVNGADL
                     EDMGLNTQTIRLQAVFFGSSYYTDYIRLLSVLQQKGADVLVHPIRGRLPNMLLVSANL
                     HTDAENINYVALDLTFKEATEMQPIFAFEDSLISKIDKLLLDLENLFDDGLRFWDSVG
                     VFDLKSRLLGLWGALFASFEAVRNLFDLDKKKYSIASSTSQRTYLRDGSGALNQLKEM
                     VDSGIQGRADLTTLSFKSQLLNITDAIDNTQAIVSKVARDEGFNRSKTVKLLGSDVVE
                     LGIMLDLIATTKLTKVLTELVEEREEELLIGDLELINQIVREHWLNIINKLREQQKNT
                     QKGVPSDKTKVIYETAEKLINNIRNVAHQFTALVLAVINKKPPLTVRMVMDSGTIHKV
                     AHAFYGDYERADELLRLNPHIRQPNFIERGTLLNCYWE"
     gene            3290..4417
                     /locus_tag="PXF40_002371"
     CDS             3290..4417
                     /locus_tag="PXF40_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803656.1"
                     /translation="MENEIVVEIDGSQHKNWKSYDIDSDFLIPADSFNFELGKSSNIE
                     VLPNYSGKTAIVKINGKTVLTGIVDTTHHTISKSGRGFSLNGRDKAAILVDCSAPITN
                     VQGLSLLDAVKKIVTPLGIKEVQLKAEKNPTLSKVDIDVGESAWEAIMRCANSAGLHC
                     WFDPKGVLIVGGADYAQPPVATLYCVKESGDSRKNNFVDATLSYDVSQSYSEVTFLAQ
                     KHGKDSDNAKHDFKWVYKNEEMELYKPKTIVLGDVENLEALMKQAKKQVSDWQLESFN
                     LTIIVPDHKTKDGTLWQAGQRVHVVCEEYDLDGIFFLMGRRFRLSRTGGTTTELRLKL
                     DGVWTPDAYQAKAQEARKRKGKKGRKKKEPVEYVGSWELGK"
     gene            4419..5081
                     /locus_tag="PXF40_002372"
     CDS             4419..5081
                     /locus_tag="PXF40_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HDL5803657.1"
                     /translation="MMRKLAKQTKEVAKGVQDSVRAAFRGVLNLVKSGSDIQQVQVSA
                     LADETIQDLELMQHFGFTSVPPAGTQAVVIPLGGKTTHGIIVATENGSFRVKNLKNGE
                     TAIYDSSGSTIILKNGRVIDIECDSFNIKCKQYSVTASGGANFNTPKLETDQQFVSQG
                     QISGNGGMVVQGGSGASFTGSLTQQGGSISTDGDVVASGKSLVTHQHNEQGDGRPTSA
                     PI"
     gene            5200..5550
                     /locus_tag="PXF40_002373"
     CDS             5200..5550
                     /locus_tag="PXF40_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HDL5803658.1"
                     /translation="MDREISPLTRDYTSENITTLQNAVYIRLTTPKGSWWADGRVGSL
                     LHLIQREKDLSRVGLLAQQYAEEALQPIIDDGRAKSITVTHEQPKDGSLNLLISVIDN
                     RGVKFEFKHPVKLV"
     gene            5563..6624
                     /locus_tag="PXF40_002374"
     CDS             5563..6624
                     /locus_tag="PXF40_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HDL5803659.1"
                     /translation="MYQIPTLEDVRREILRDIQSLEPTADIEVDSDYFVRASALASCV
                     VGLYAHQNWIVRQYFPDTADSEYLEMHAKLRNLYRKNATYASGSLKVFGTAGSVINEG
                     LQVKFGERFYVTKSSDVIGDDGSATVRVISMATGASSNVKSESKAQLTAAPAGVSSDC
                     LLLPDVTGGTEVESDAALLARLLEQIRRPPSGGNKNDFRQWAESVDGVTSAFVYPLRR
                     GEGTVDIAITSGDTVPSDEIVRATQAYIDEVRPVTAKSVYVLKPVEKRVNFNIKVQLD
                     TDTTLDGVKAEIENALENYFLSLKPADTLIISQIEAVISDLVGVVDREIVQPTRNQTI
                     DAYREMGWFRLGDVTVELM"
     gene            6624..7214
                     /locus_tag="PXF40_002375"
     CDS             6624..7214
                     /locus_tag="PXF40_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HDL5803660.1"
                     /translation="MVTINSKHGKALGGLLPPVSYDPNGRWLALSLEVEGRELDRIDA
                     RAKTLIDAVDVSTGIFIDDWERVCGLTANSSLPLETRIERVIAKLNQLGGLSIGYITQ
                     VAKELGYCIKISEPQPFIAGLSRAGDMLWHKDIMWTFFVDICNPTDDYKRFRASVSMA
                     GDALMGRYKDPILESLLEEVKPAFSRVWVRYLGDIE"
     gene            7211..>7530
                     /locus_tag="PXF40_002376"
     CDS             7211..>7530
                     /locus_tag="PXF40_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803661.1"
                     /translation="MKQVMNPINTPTQRFKDGNPATGEYGTIVTAEFLNNVQDSVINT
                     QQELHSVLAEAGIEANDEQVNQVAKAIKKIAGDATRDNFNALANPDGYKHIGRCKSVA
                     ELRT"
BASE COUNT         2220 a         1395 c         1905 g         2010 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctcgcaa
       61 aatgagctac gccgtgcctc agaagcgact aagcaacgag tccgagagtt aaatgctgaa
      121 ttgggtaaaa ccagttttgg ggataaggca ggaagttttg ggcgtgggtt gatgggtgca
      181 ggggttggaa ttgctgcagg tgcagcaatg gctcgccagc ctgcaagaaa tcaaatggaa
      241 tttgatagac agcttgcaat ggtagcgaat accgcctttt cagatcgtga tgtgaaaggg
      301 cgtattgatg ggaaaagaga gttacttgat gccgtacaga aagcagtaag tgtaggcggt
      361 ggctcaaaag aagaagcgtt gagctcacta gacgctttac ttgcctcagg tgctgtttct
      421 accgaaaccg ctctcaattt actcccaacg ttgcagaaag gtgcggtcgc aacaggggca
      481 agtgcaaatg atatggctca aattgctatt tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg gtcgagtctt agatatggca gttgccgctg ggcaagccgg tagctttgag
      601 cttgcagata tggcaagttg gttgcctcaa caaatggccg ctgcaaaaca agctggctta
      661 agcggcattg agggatttga gcgactttta attgcaaacc aacaggctcg tgtcactgcc
      721 ggtacaagta acgaggctgg taataattta gtgaatctgt tgggtaagat tactgctaaa
      781 gaaactaatg agcgttttaa gaatattgaa tataaagatc cgaaaactgg caaaaccaaa
      841 gcgattgatt ttgcaaaatc tatggagcat tacaagggaa aagggcaaga ttcattgcag
      901 gcttttatgt ctattatgga tgacgttgtc gggagtgata aacgctatca agaactacaa
      961 gctaaactta aaactgctaa aggcgaagag cagaaacgct tattcaatga attaacaaac
     1021 ttagttgaag gtacggcaat tggagaaatt atttctgatc gccaagcatt aatggctcta
     1081 ttagggataa agaataatgt tcaattaggt gaaaaagtac agaaagatat tcagaatagt
     1141 gaaggagctg ttgaaacctc tcacgctgtt attcgggata ctaatgctca taaagttgaa
     1201 tcattaaaaa atacaactga atttgcacaa atgaaaaact ttgaaaaagt aaatggagtg
     1261 ttaggcacat tagctgaatt actgaataaa tacgccaatg aataccctaa cttaactcaa
     1321 tttttaagtg gtgcaacaga tgccgttaaa atttttggag cagctcttgc tgcatcaagt
     1381 gtgcttgatt tattaaccgg taaaaaagac aagggcggac taattggtga tgttttggat
     1441 aaatcatcaa aagctagtgg aggtaaaggt aaggtaggta aattgctttc ggttggtggc
     1501 tcttttgcta gtgttgcagg cgttgccaca atgctacacg gcgaccaagc cccgatgagt
     1561 gaggagcgaa aagcagagtt aagagatcct aattatcaag ctcgtaaaat gtacgagtac
     1621 aaaaaagaga ttttaggtag ccgtttccac tcgttttttc gtagtaatga aacccttgag
     1681 caatatcgga aagatgtgag tgcttatgag gctaagcaaa agaatagcaa tactatggga
     1741 gctgtacaag gggttttaag taccattccg agcttacaag agttacgccc taaagttgat
     1801 tcggttactc aaaccctatc cacctatcaa gccgactttc aggcttttgg ggcaacgatt
     1861 tcagccggta ttgaggcagg gcttgcctcg caatctcata cgattgcaaa tcaaatcacc
     1921 gtggagctgg acggttcggt ggtggctgaa aaagtggctg aatatcagtt taattttaac
     1981 aagaggatgg cgtaatgagc ggttggacaa tgcctattca acaggcgagt tttaaaggtg
     2041 tgcgttttga cgtgcttgca gtggatgata gctttgagcg agcggtagtt gaacacgcct
     2101 acccttttgt aaatggggct gatttagagg atatggggct aaacacccaa actattcggc
     2161 tgcaagcggt cttttttggc tcaagctatt acacggacta tatccgctta ctttcagttt
     2221 tgcagcaaaa aggggctgat gtattagtcc accctattcg tgggcgttta ccgaatatgt
     2281 tactcgtttc ggcgaatcta cataccgatg ccgaaaatat caattatgtt gccttagatt
     2341 tgacctttaa agaggcaacc gaaatgcagc cgatttttgc ctttgaagat tcgctgattt
     2401 cgaaaatcga caagctgcta cttgatctcg aaaacctgtt tgatgatggc ttgcgttttt
     2461 gggatagcgt tggggtgttt gatctgaaat ctcgtttgct tgggctttgg ggggcgttgt
     2521 ttgcctcgtt tgaggcggtg cgtaacctgt ttgacttgga caagaaaaaa tacagcattg
     2581 cctcatcaac ctcacaacgc acctatttaa gagacggttc gggggcattg aatcagttaa
     2641 aagaaatggt ggatagcggt attcaggggc gtgctgattt aacgacactc tcgtttaaat
     2701 ctcagttact caatattact gatgcgatag ataacactca ggcgattgtg agcaaagtgg
     2761 ctagagatga gggttttaac cgctcaaaaa cggttaagtt acttggctct gatgtggttg
     2821 agcttggcat tatgcttgac cttattgcca cgactaagct caccaaagtc ttgactgagc
     2881 tggtagaaga gcgtgaggaa gagctgctaa ttggtgattt agagttaatt aaccaaattg
     2941 tgcgtgagca ttggctgaat attatcaaca aactgcgtga gcaacagaag aacactcaaa
     3001 aaggcgtgcc gagtgataag acaaaagtta tctacgagac cgcagaaaag ctgatcaaca
     3061 atatccgtaa tgttgcccat cagtttactg cacttgtgct tgcggtaatt aataaaaaac
     3121 cgcctttgac cgtgcgaatg gtaatggata gcggcacaat ccataaagta gctcacgcct
     3181 tttatgggga ttatgagcga gcggatgagc tattacgtct taatccgcat attcgccagc
     3241 caaactttat tgagcgaggc acgctgttaa attgttattg ggagtaaaaa tggaaaatga
     3301 aattgtggtg gagattgacg gctcgcagca taaaaactgg aaaagttatg atattgacag
     3361 cgatttttta attcctgctg atagttttaa ttttgagttg ggtaaatcta gcaatataga
     3421 ggttttacct aattattcgg gcaaaacggc aatagttaaa atcaatggca aaacggtgct
     3481 cactggcatt gtggatacca cacatcacac cattagcaaa agcgggcgtg ggtttagcct
     3541 aaatggacgt gataaagccg ctattttggt ggattgctct gccccgatta ccaatgtgca
     3601 agggctctct ttgcttgatg ctgttaaaaa aattgtaacc cctcttggga ttaaagaggt
     3661 gcaactgaaa gccgagaaaa acccgacttt aagcaaggtg gatattgatg tgggtgaatc
     3721 ggcgtgggag gcgattatgc ggtgtgccaa ctcggcaggt ttgcattgtt ggtttgaccc
     3781 caaaggcgtg ttaattgtcg gcggtgcgga ttacgctcaa ccgcccgttg ccacgttata
     3841 ttgcgtgaaa gagtcggggg atagccgtaa aaataacttt gttgatgcaa cactttctta
     3901 tgatgtgtcg caaagctatt cggaggtcac ttttcttgct caaaaacacg gcaaagattc
     3961 tgataatgcc aagcacgatt ttaaatgggt gtataaaaat gaggaaatgg agctttataa
     4021 accgaaaact atcgtgctgg gcgatgtgga gaacctcgaa gccttgatga aacaggcgaa
     4081 aaaacaggta tcagattggc agttggagtc atttaacctc acgattattg tacctgacca
     4141 taaaaccaaa gacggcacgt tgtggcaagc tgggcaacgt gtgcacgtgg tatgtgagga
     4201 gtatgattta gatggtattt tctttttaat ggggcgacgt tttcgactct ctcgcacggg
     4261 tggcacaacc accgaattgc ggttaaaact ggatggcgtg tggacacctg atgcttatca
     4321 agctaaagca caagaggctc gcaagcgtaa aggcaaaaaa ggacgtaaga aaaaagagcc
     4381 tgtagaatat gtaggctcgt gggagttggg aaaataatat gatgagaaaa ttagcaaaac
     4441 agactaaaga ggtggcaaaa ggtgtgcaag atagcgtgcg tgctgctttt agaggggtat
     4501 taaatttagt caagagtggc agtgatattc agcaggtaca ggtgtccgct ttagcggacg
     4561 aaactatcca agatttagag ctaatgcagc attttggttt cacttccgtg ccacctgccg
     4621 gcacgcaagc ggttgttatc cccttaggtg gtaaaaccac gcacggtatt attgtggcga
     4681 ctgaaaacgg ctcgtttagg gttaaaaatc taaaaaatgg tgagacggct atttatgatt
     4741 caagcggctc aactatcata ttaaaaaacg ggcgagtgat tgatattgag tgcgatagct
     4801 ttaacattaa atgcaagcaa tattccgtca ccgcaagcgg tggagcaaat tttaacaccc
     4861 cgaaactaga aaccgaccag cagtttgtgt ctcaagggca gatcagcggc aacggtggaa
     4921 tggtagttca aggcggaagt ggtgcaagtt tcactggctc attaacacaa caaggaggca
     4981 gtatctcaac tgatggtgat gtggtggcat cgggtaaatc actggttaca catcaacaca
     5041 acgaacaagg cgatggcaga cctacctctg ctccaattta acttacaagc taatttacaa
     5101 gcggtctaat tttgcaaatt ttttgtagaa aaagaccgct tgccatttgt ggaagtctct
     5161 ccccgttact cctgtcttta atgtctctac catagcaata tggacagaga aatcagcccg
     5221 ctcactcggg actatacaag tgaaaatata actacactgc aaaatgccgt gtatatcaga
     5281 ctaactactc cgaaaggctc gtggtgggca gatgggcgtg taggttctct gctccatctt
     5341 attcaacgtg agaaagattt aagccgtgtg gggctattag ctcaacagta cgccgaagag
     5401 gctttgcagc cgattattga tgacggacga gccaaaagca ttacggtgac acacgagcag
     5461 ccaaaagacg gctcgttaaa tcttttaatc tccgttattg ataatcgtgg ggttaaattt
     5521 gagtttaaac accctgtaaa actggtttag gtggttttta aaatgtatca aatcccaacg
     5581 cttgaagatg ttagaagaga aattctgcga gatattcaat ctttagagcc aactgctgat
     5641 attgaggtgg attcggatta ttttgttcgt gcctccgctt tggcaagctg tgtggtgggg
     5701 ctgtatgctc accaaaactg gattgttcgt cagtatttcc cagatacggc agactccgaa
     5761 tacctcgaaa tgcacgctaa attgcgaaat ctttaccgta aaaatgcgac ctatgcgagt
     5821 ggttcgttga aagtttttgg tactgctggc tcagtaatca atgagggctt gcaagttaaa
     5881 tttggcgagc gtttttatgt aaccaaaagc tcggacgtta ttggtgatga tggctctgca
     5941 acggtgcgag tgatttcaat ggcaacaggg gcatcaagca atgttaaatc tgaaagtaaa
     6001 gcacaactga ctgctgctcc tgctggcgta tcaagcgatt gcttgttatt gcctgatgtg
     6061 acaggcggga cggaagtgga aagcgatgcg gcattgctgg ctcggttatt agagcagatt
     6121 cgccgaccac cgtcaggcgg gaataaaaat gacttccgcc aatgggcaga aagcgttgat
     6181 ggcgtaacct ctgcgtttgt ttatccatta cggcgtggcg agggtacggt agatattgca
     6241 atcacctcag gtgataccgt gccaagtgat gaaatcgtgc gagcaactca agcttatatt
     6301 gatgaagtcc gccctgttac ggctaaatcg gtttatgtac ttaagccagt tgaaaaacgg
     6361 gtcaatttta acatcaaagt gcaacttgat acggatacga cgcttgatgg tgtaaaagcg
     6421 gaaatcgaaa acgctttaga gaattatttt ttatcactca aacctgctga caccttaatt
     6481 atttcgcaaa ttgaggcagt aattagtgat ttagtgggcg tagtagatcg tgagattgta
     6541 cagccaacca gaaaccaaac gattgatgcc taccgtgaaa tgggctggtt cagattgggt
     6601 gatgtaactg tggagttgat gtgatggtaa cgattaactc taaacacggc aaggcattgg
     6661 gcggtttatt accgcctgta tcgtatgacc caaacggcag atggctagcg ttatcccttg
     6721 aagttgaggg gagagagcta gaccgcattg atgcgagagc caagacttta atcgatgccg
     6781 ttgatgtatc aacaggcatt tttattgatg attgggagcg ggtttgtggc ttaacggcga
     6841 atagctcact accgcttgaa acccgaattg agcgtgtgat tgcaaagctg aatcagttgg
     6901 gtggattgtc gataggctat atcactcaag tggccaaaga gcttggatat tgcatcaaaa
     6961 ttagtgagcc acaacccttt attgctgggc taagccgagc tggggatatg ttatggcata
     7021 aagacattat gtggacattt tttgtggata tttgcaaccc cacagatgat tacaagcgtt
     7081 ttagagcaag tgtgtcaatg gctggcgatg cgttaatggg acgatacaaa gacccaattt
     7141 tagaaagtct acttgaagag gtaaaacctg catttagccg tgtgtgggta agatatttag
     7201 gagatattga atgaaacaag tgatgaatcc gattaatacc ccaacacagc gttttaaaga
     7261 tggcaaccct gccactggtg aatatggcac gattgtgact gctgaatttt tgaataacgt
     7321 ccaagattcg gtcattaaca cccaacaaga attgcacagt gtacttgctg aagcaggaat
     7381 cgaagcaaat gacgaacaag ttaatcaggt ggctaaagca atcaagaaaa ttgcgggcga
     7441 tgctactcgt gataatttta acgcattagc caaccctgat ggttacaaac acatcggtcg
     7501 ctgcaaatcg gttgcggagt tacgtactat
//
LOCUS       DANMCL010000108         7523 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.110, whole genome shotgun sequence.
ACCESSION   DANMCL010000108 DANMCL010000000
VERSION     DANMCL010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7523
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.110"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            37..456
                     /locus_tag="PXF40_002377"
     CDS             37..456
                     /locus_tag="PXF40_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS sensor domain-containing protein"
                     /protein_id="HDL5803662.1"
                     /translation="MVPSNEAVLKAVHDTLVISTTDLQGVITYANDLFCKLTGFTREE
                     LIGQPHNIVRHPAVPKEVYKDMWDTIQAGKIWTGIVPNCGKGGVVYVVDTTVQPMFDE
                     TGKITGYISVRRVINDLMTNFEAVESAKEIFDDFYGE"
     gene            527..2083
                     /locus_tag="PXF40_002378"
     CDS             527..2083
                     /locus_tag="PXF40_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase flavoprotein subunit alpha"
                     /protein_id="HDL5803663.1"
                     /translation="MSLIPHIHIAYGSESGNAEKLAQQLAIQPFLLPYSPTLSTLNET
                     DLSQLSAESLLLIVTSSFGDGEPPENADEFAEKLENLTACNLQYAIFGLGDITYDKFC
                     GYSKQLDSLLQQKQAKAVIARVDADLNYQEIFKQWLPLVEQALHSTNKETIQHSLSVQ
                     AYGEEMAYQAEVLEIKHLANSSPAVYHIRLSLKESGIFYQAGDLIYVKVQQPDRLLNE
                     YAEWFNDQNAVALLRHKELRLLSKNVLRDIQKICGSNELKDLTKISNKKALEQYVYGR
                     DLLDVLRDFDPNKSVTLADLEPILSNLAARAYSISSCGKTHPDYVDLCIRHVSYHLNG
                     RDYQGTASGYLSELQAGDFVSIFANANPNFRLPETLTAPVVMIGSGTGIAPHIAFLQA
                     LEQQYQGVESYLFFGERYRDKDFLYQTELENYLAKGTLTQLFTAFSRDQAEKFYVQDA
                     LSQQAELVWHLIQQGAYFYICGSKAMSKAIDAELIKIADQIGGDPYIDDFNNIIAKLV
                     AEGRLMRDVY"
     gene            complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXF40_002379"
     CDS             complement(2141..2398)
                     /gene="rpsQ"
                     /locus_tag="PXF40_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005759643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HDL5803664.1"
                     /translation="MTDKIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKL
                     HVHDENNEAKLGDVVEIKECRPISKTKSWTLVRVVEKAVVA"
     gene            complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXF40_002380"
     CDS             complement(2398..2589)
                     /gene="rpmC"
                     /locus_tag="PXF40_002380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HDL5803665.1"
                     /translation="MKAQELRNKSVEELNGELVNLLGEQFKLRMQAATGQLQQTHQLK
                     QVRRSIAQVKTVLTEKAGE"
     gene            complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXF40_002381"
     CDS             complement(2589..2999)
                     /gene="rplP"
                     /locus_tag="PXF40_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HDL5803666.1"
                     /translation="MLQPKRTKFRKVHKGRNRGIAGGTEVSFGSFGLKAIGRGRLTAR
                     QIEAARRAMSRAVKRQGKIWIRVFPDKPITEKPLEVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVSEEVARNAFALAAAKLPFKTTFVTKTVM"
     gene            complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXF40_002382"
     CDS             complement(3013..3720)
                     /gene="rpsC"
                     /locus_tag="PXF40_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HDL5803667.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLN
                     KELANASVSRITIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQIN
                     IAEVKKPELDAKLVADSIASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGA
                     EIARSEWYREGRVPLHTLRADIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESE
                     KEPAAQPKKAPRGKGRK"
     gene            complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXF40_002383"
     CDS             complement(3740..4072)
                     /gene="rplV"
                     /locus_tag="PXF40_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HDL5803668.1"
                     /translation="METIAKHRYARTSAQKARLVADLIRGKKVSVALEILTFTNKKAA
                     TLVKKVLESAIANAEHNDGADVDDLKVAKIFVDEGPSMKRVMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXF40_002384"
     CDS             complement(4083..4358)
                     /gene="rpsS"
                     /locus_tag="PXF40_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HDL5803669.1"
                     /translation="MPRSLKKGPFLDLHLLKKVEKAVESGDKKPIKTWSRRSMIIPSM
                     IGLTIAVHNGRQHVPVYVSDEMIGHKLGEFAPTRTYRGHAADKKAKK"
     gene            complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXF40_002385"
     CDS             complement(4389..5210)
                     /gene="rplB"
                     /locus_tag="PXF40_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HDL5803670.1"
                     /translation="MAIVKCKPTSAGRRHVVKVVNAELHKGKPFAALLDTKSKTGGRN
                     NLGRITTRHIGGGHKQHYRLIDFKRNKLDIPGVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLTAGDQIQAGASAPIKVGNALPMRNIPVGTTVHNVELKPGKGGQIARSAGA
                     YVQIIAREGNYVTLRLRSGEMRKVLAECTATIGEVGNSEHMLRVLGKAGANRWRGIRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRHNKRTDKFIVRRRGK"
     gene            complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXF40_002386"
     CDS             complement(5229..5534)
                     /gene="rplW"
                     /locus_tag="PXF40_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005818317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HDL5803671.1"
                     /translation="MIQQERLLNVLKAPHISEKATNNAEKGNTIVFKVALDANKVEIA
                     NAVEELFEVKVDSVRTVVVKGKTKRRGAKVGRRSDWKKAYVTLQEGQSLDFVEGAAE"
     gene            complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXF40_002387"
     CDS             complement(5531..6133)
                     /gene="rplD"
                     /locus_tag="PXF40_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HDL5803672.1"
                     /translation="MELQVVGANALTVSETTFGREFNEALIHQVVVAYAAGARQGSRA
                     QKTRAEVSGSGKKPWRQKGTGRARSGDIKSPIWRSGSVTFAAKPQDHSQKVNKRMYRG
                     AIKSILSELVRQDRLVVVEKFEIDAPKTKVLAQKLKDMALNDALIITANVDENLFLAA
                     RNLYKVDVRDVQGIDPVSLIAFDKVVVTVDAVKQIEEMLA"
     gene            complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXF40_002388"
     CDS             complement(6149..6778)
                     /gene="rplC"
                     /locus_tag="PXF40_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HDL5803673.1"
                     /translation="MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDG
                     YSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFT
                     DVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK
                     MAGHLGAERVTVQSLEVVRVDVERKLLLVKGAVPGATNGDVIVKPAVKA"
     gene            complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXF40_002389"
     CDS             complement(6804..7115)
                     /gene="rpsJ"
                     /locus_tag="PXF40_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HDL5803674.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
BASE COUNT         2198 a         1589 c         1379 g         2357 t
ORIGIN      
        1 catttatatt aatggagatt caacacggct gaacaaattg ttccttcaaa tgaagctgtt
       61 ttaaaagcag tccacgatac tttagttatt tcaacaactg atttacaagg tgttattact
      121 tacgctaacg accttttctg caaattaacc ggttttaccc gtgaagaatt aattggacaa
      181 ccgcataata tcgtacgcca cccagctgta ccaaaagaag tttataaaga tatgtgggat
      241 acaatccaag ccggtaaaat ctggacaggt atcgtaccaa actgcggtaa aggcggtgta
      301 gtttatgtgg ttgataccac cgttcaacca atgtttgatg aaacaggcaa aattacaggc
      361 tatatcagcg ttcgccgtgt aattaatgat ttaatgacca actttgaagc agtagaatca
      421 gcaaaagaaa tctttgatga cttctacggt gaataattaa aaaacaatga ttgcgtgtaa
      481 aagatgatct cttttacacg caatttttta ttttcgagga gtttgtatgt ctctcattcc
      541 ccatatccac attgcttatg gttcggagtc tggtaacgca gaaaagcttg cccaacaatt
      601 agctatccaa ccctttttac ttccctactc acccacactt tctacattaa acgaaaccga
      661 tttaagccaa ttatctgccg agagtttatt gcttattgta accagctcct ttggtgatgg
      721 cgaaccacct gaaaacgccg atgaatttgc agaaaaattg gaaaatttga ccgcttgtaa
      781 tctgcaatat gcgatattcg ggctaggtga tattacttat gataaattct gtggctatag
      841 caaacaacta gattcattat tacaacaaaa acaagctaaa gctgtgattg caagggttga
      901 tgccgattta aactatcaag aaatttttaa acaatggcta cccctagtgg agcaggcatt
      961 acattcaaca aacaaagaaa cgatccaaca ttccctttct gttcaagctt acggcgagga
     1021 aatggcatac caagcagaag tgttggaaat taagcatttg gcaaactcaa gccctgcggt
     1081 gtatcacatt cgtttatcat taaaagagag cggtattttc tatcaagcag gggatttaat
     1141 ttatgtcaaa gtgcagcaac cagacagact attaaatgaa tatgcagaat ggtttaacga
     1201 tcaaaatgca gttgcattac tacgccataa agaactccga ctactaagta aaaatgtact
     1261 gcgtgatatt caaaaaattt gcggcagtaa tgaactcaaa gatttaacta aaatttccaa
     1321 taaaaaagca ttggaacaat atgtctatgg gcgggattta ttagacgtat tacgcgattt
     1381 tgacccaaac aaaagcgtga cattagccga tttagagcca attttatcta acttagccgc
     1441 acgagcctat tcaattagct cttgcggtaa aactcaccct gattatgttg atttatgtat
     1501 ccgccacgtt tcgtatcatt taaacggtag agattatcaa gggactgcaa gtgggtattt
     1561 atccgaatta caagcgggcg attttgtctc gatttttgca aatgccaatc cgaatttccg
     1621 tttacccgaa acattaaccg ctccggtggt gatgattggc tcaggtactg gcattgctcc
     1681 gcatatcgca tttttacaag cgttagagca gcaatatcag ggggttgaaa gctatttatt
     1741 cttcggcgag cgttatcgtg ataaagattt tctgtatcaa acggaactgg aaaattactt
     1801 agcaaaaggc accttaactc agctgtttac tgctttttca cgtgatcagg cagagaagtt
     1861 ttatgtgcaa gatgccctat cgcaacaagc agagttagtt tggcatttaa ttcagcaagg
     1921 ggcttatttc tatatttgtg gtagcaaagc aatgagtaaa gcaatagatg cggaactcat
     1981 caaaattgca gatcaaattg gaggcgatcc ttatattgat gatttcaata atattattgc
     2041 aaaattggtc gcagaaggcc gattaatgcg agatgtatat tagcaaatga aaaaaactaa
     2101 aaacccagca aaagctgggt ttttatttaa tcatagttca ttaagcaaca actgctttct
     2161 caactacacg aactaaagtc caagatttag tttttgaaat aggacgacat tccttaattt
     2221 caacaacatc acctaattta gcttcattgt tttcatcgtg tacatgaagt ttagtagtac
     2281 gacggataaa cttaccgtat aacggatgtt taactgtacg ttcgatagca acaacaaatg
     2341 atttatccat tttgtcgcta accactttac cttgtactgt acgaatttta tcagtcatta
     2401 ttcacccgcc ttttcggtta atacagtttt aacttgtgca atactacgac gcacttgttt
     2461 taactggtgg gtttgttgaa gctgaccggt ggctgcttgc atacgcaatt tgaattgttc
     2521 acctaaaagg ttcactaact caccattcag ctcttcaaca cttttattac gtagttcttg
     2581 agctttcatt acatcaccgt cttagttaca aatgtggttt tgaacggaag tttagctgcc
     2641 gctaatgcaa acgcattgcg tgcaacttct tcagaaacac catccatttc atagagaact
     2701 ttacccggtt ggattaaggc tacccagtac tcaacgttac ctttaccttt acccatacgg
     2761 acttctaatg gtttttcagt aattggtttg tctgggaaca cacggatcca gattttacct
     2821 tgacgtttaa ccgcacggct catcgcacga cgagcagctt caatttgacg agctgttaaa
     2881 cgaccacggc caatagcttt taaaccaaat gaaccgaagc tcacttctgt gccacccgcg
     2941 ataccacggt tacggccttt gtgtacttta cggaattttg tgcgttttgg ttgtaacatt
     3001 cagtgattct ccttatttac gacctttgcc acgtggcgcc tttttaggct gtgccgctgg
     3061 ttctttttca gattcaatca ctgcagccat tccaccaaga atttcacctt tgaagatcca
     3121 cacttttacg ccgattacgc cgtaagtagt gtgagcttca gcagtactat aatcgatgtc
     3181 tgcacgaagc gtatgtagag gtacacgacc ttcacgatac cattctgagc gagcaatttc
     3241 tgcaccacct aaacgaccgc taacttcaac tttgatacct ttagcaccta atttcatcgc
     3301 gttttgaact gcttttttca ttgcacgacg gaacatcaca cgacgttcaa gttgagaagc
     3361 gatgctatct gcgactaatt tcgcatctag ctctggtttt ttcacttcag cgatgttgat
     3421 ttgagctgga acgccagcga ttttcgcaac tgcgttgcgt aatttttcaa catcttcacc
     3481 ttttttaccg ataacgatac ccgggcgagc tgtgtgaata gttacacgaa tgctttttgc
     3541 aggacgctca atagtgatgc gtgatacaga agcgttcgct aactctttgt ttaaaaattt
     3601 acgtactttg aagtcgccgt ctaagttatc agcgaaatct tgtgtattcg cgaaccaagt
     3661 agagttccaa ggtttaacaa tacctaggcg aataccatta ggatgtactt tctgacccat
     3721 ttgttattct cctacttaat taacgatctg acacaaccac agtgatgtgg cttgtacgtt
     3781 ttaaaatacg atctgcacga ccttttgcac gtggcattac acgtttcatg cttggacctt
     3841 catcaacgaa gattttagca actttaagat catcgacatc tgcaccgtca ttatgctctg
     3901 cgtttgcaat agctgactct aatactttct taacaagcgt cgctgctttt ttgttagtga
     3961 aagttaagat ttctaatgct acagaaactt ttttaccgcg aattaaatca gcaactaagc
     4021 gagctttttg ggcagaagta cgagcgtaac gatgtttagc aatagtttcc atcttttacc
     4081 tcttatttct tagctttctt atctgcggcg tgaccgcggt atgtacgagt cggtgcaaat
     4141 tcacctaatt tatgaccgat catttcgtcg gaaacataaa caggaacgtg ctgacgacca
     4201 ttatggactg cgatggtcaa accaatcatt gatggaatga tcattgaacg acgggaccaa
     4261 gttttaattg gttttttatc cccgctttcc accgccttct ctaccttctt caacaagtgt
     4321 aggtcaagga aaggaccttt cttgagggaa cgtggcattg gtgtttacct tttagttaat
     4381 gaattaaatt atttgccacg acgacgtacg atgaatttat cagtacgttt gttgtgacga
     4441 gttttcttac ctttggtttg aacgccccaa ggtgtaacag gatgtttacc gaagttacga
     4501 ccttcaccac caccgtgtgg gtgatctacc gggttcattg cagtaccacg aacagttgga
     4561 cgaatacctc tccaacggtt tgcacctgct ttaccaagaa cgcgaagcat atgctctgag
     4621 ttacctactt caccaatggt tgcagtacac tcagctaata ctttacgcat ttcgcctgaa
     4681 cgaagacgta aagttacata gttaccttca cgggcaatga tttgaacgta agcaccagca
     4741 gaacgtgcaa tttgaccacc tttaccaggt tttaattcaa cgttgtgtac agttgtacct
     4801 actgggatgt tacgcattgg taatgcgtta cctactttaa tcggagctga agcacccgct
     4861 tgaatttgat caccagcagt taaacctttt ggtgctaaaa tatagcgacg ttcaccatct
     4921 ttataaagta ctaatgcgat attcgcagaa cgatttggat cgtattctaa acgctcaaca
     4981 acacccggaa tgtctaattt attacgttta aaatcaatta aacggtagtg ttgtttgtga
     5041 ccgccaccaa tgtgacgagt tgtgatacga cctaagttgt tacgaccacc agttttagat
     5101 ttagtatcta aaagtgctgc aaaaggttta cctttgtgaa gctcagcgtt tacaacttta
     5161 acaacgtgac gacgaccagc ggaggtcggc ttacatttaa cgatagccat ttattttatc
     5221 tcctctgatt actctgccgc accttcaacg aagtcaagcg attgaccttc ttgaagagtt
     5281 acataagctt ttttccagtc actacgacga ccaactttag caccacggcg tttagtttta
     5341 cctttaacta ctacggtacg aacagaatca acttttactt caaaaagttc ttcaactgca
     5401 tttgcaatct caactttgtt tgcatctaat gcaactttga atacgattgt attgcctttt
     5461 tctgcgttgt ttgtcgcttt ttcagagata tgtggtgctt taagcacgtt tagcaaacgt
     5521 tcttgttgaa tcatgctaac atctcctcaa tttgttttac tgcatctacg gttacaacca
     5581 ctttatcgaa agcaattaag ctaactgggt caataccttg cacatcacgc acatcaactt
     5641 tatataagtt gcgtgctgct aagaataaat tctcatctac gtttgcagta atgataagag
     5701 cgtcatttaa cgccatatct tttaattttt gtgctaatac tttagttttt ggtgcatcga
     5761 tttcgaattt ctcaacaacc actaaacggt cttgacgaac taattcagaa agaatgcttt
     5821 tgattgcacc acggtacatt cttttgttca ctttttggct gtgatcttgt ggtttcgcag
     5881 caaaagttac actacccgaa cgccaaattg gtgatttaat atcaccagaa cgtgcacggc
     5941 ctgtaccttt ttgacgccaa ggttttttac ctgaaccaga cacttcagca cgagtttttt
     6001 gagcacgaga tccttgacga gcacctgctg cataagcaac aactacttgg tggattaatg
     6061 cttcattgaa ctcacgtccg aaggtagttt cagaaacagt tagtgcgttt gcacctacaa
     6121 cttgtaattc catctctatc tcctagactt atgctttaac tgccggtttt acgataacat
     6181 caccattagt tgcaccagga acggcacctt taactaataa taatttacgc tcaacatcta
     6241 cacgaacaac ttcaagtgat tgaacggtta cacgctctgc acctaagtgt cctgccattt
     6301 ttttaccttt aaacacacga cctggagttt ggttttgacc aatagaacca agtacacgat
     6361 gtgataaaga gttaccgtga gttgcatctt gagtacggaa gttccaacgt ttaacaccac
     6421 cttggaagcc tttacctttt gatgtaccag taacatcgac ttttttaaca tcagtaaaga
     6481 tgtcaacatt gatttcttga cctaaagtga attcttcacc ttcagtagta cgaaattccc
     6541 ataaaccgcg tccagcttca acacctgctt tcacgaaatg acctgcttct ggtttagtta
     6601 cacggctagc ttttttagag ccagtagtaa cttgaattgc agagtagcca tcgttttcaa
     6661 gggttttaac ttgagtaaca cggttggctt cgatttcgat aacggtaact ggaatagaca
     6721 cgccgtcttc agtgaaaacg cgggtcatac caactttacg accgattaaa ccaatcattg
     6781 taataacctc ttaaaattcc caattaacct agactaatct gaacgtcaac gccagcagct
     6841 agatctaaac gcattaatgc atcaacagtt ttttctgttg gttcaacaat atcaactaaa
     6901 cgtttgtgag tacggatttc atattggtca cgtgcatctt tattcacgtg tggagaaatc
     6961 aatacagtga aacgttcttt acgagttggt aaaggaattg gaccacgaac ttgtgcacca
     7021 gtacgtttag ctgtttctac gatctccgca gtagattgat caattaaacg atgatcaaat
     7081 gcttttaagc ggatacggat tctttggttc tgcattagac cagagctcca attaaaaaat
     7141 ttagctaata aaaaaaccaa actaccactt aacaaattag ttaagggagc tcagttaaac
     7201 ctatatagtt ccaaaattag gaacattgta tacactacaa tatctgtagt gccatttgat
     7261 aaatgattac atcaaatgtc tttagatacc taaagctttg ctatcatact cgtttcattt
     7321 cccttatgca agtaattttt gttttttata ttgacaataa tttgattcga taaaacttct
     7381 aaagatacac aatatttcca atacttcatt tgaagtggct caaataaatt gtatttatgc
     7441 atttttttat tcaaactttt cgagccactt cacaaatcta aaaaatccta gttgaaattt
     7501 aatccataag agtatttatt att
//
LOCUS       DANMCL010000109         7516 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.111, whole genome shotgun sequence.
ACCESSION   DANMCL010000109 DANMCL010000000
VERSION     DANMCL010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7516
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.111"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            102..1898
                     /locus_tag="PXF40_002390"
     CDS             102..1898
                     /locus_tag="PXF40_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate-specific subunit IIBC"
                     /protein_id="HDL5803675.1"
                     /translation="MDFLTEILLFLKDQVLNKAPFLLGIVACLGYILLKKDTSTIIKG
                     TIKTIVGFMIVQAGSGFLVTNFKPVIDGLAKYHQLTGAVIDPYTSMQSTIQTMGENYA
                     WVGYAVIGALFLNILLVVFRRLTGIRTIMLTGHIMFQQAGLVAVFYMIIGASMWETII
                     YTSVLMALYWGISSNIMYKPTQAVTGGAGFSIGHQQQIASWIAVKLAPKLGDKDDTVD
                     KMKLPNWLNIFHDSISATALVMTIFFGIILLSFGLDNLKELAGKTNQFMYILEMGLKF
                     AVAIQIIVTGVRMFVAELSEAFKGIAERLIPNSVLAIDCAAIYAFSPNAMVFGFMWGA
                     IGQFVAVGGLLAVGSPVLIIPGFIPMFFSNATIGVFANQFGGWKAVMKICFVMGIIEV
                     LGSAWVIQMLASQGTTFNGWMGMADWALFFPPILQGIISIPGFFFVIVAAAMVYMFFA
                     SKQLRAEEAEAAARGITLEQLDGYGLDEVKAEPKAEAVVQQAVENAENSANPIRILAV
                     CGSGQGSSMMMKMKIKGYLDKRGIPNIMDSCAVTDYKGKLSEVDIIVSSKHLANEIEV
                     PEGKAVLGVQNMLNPNSFGDELVELINQHNAK"
     gene            1978..3039
                     /locus_tag="PXF40_002391"
     CDS             1978..3039
                     /locus_tag="PXF40_002391"
                     /inference="COORDINATES: protein motif:HMM:NF012376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HDL5803676.1"
                     /translation="MKKILSTLFMLSAVSVAVAKEVNIKLLGTSDVHGRVVPWSYGAD
                     VEDKSGSFAQIATYVKEVRANHKNVLLFDIGDAIQDNQVEEFAKTLDKAKNNPVPKVL
                     NAMNYDIFILGNHEFNFGMPNLDAILKDINAKILTANFYHKDGKRYVEPTTIIERDGV
                     KLGIIGLTTPMSAIFEKDTGHLDAMKFTSPIEEAKAQIADLKAKGVDAIIVLAHMGIE
                     NENNIPDTGVADLVNAVDGIDVIIAGHMHKDVPSETIKNTLITEPHRYGTVVSEVDLA
                     FDVNDKGEVKLLSKTAKTVPVKKLASDPEIEKIYQPYHNELRALNNVKIGETAQDLIP
                     QGKITVYRLLSRKTPECPH"
     gene            3027..3491
                     /locus_tag="PXF40_002392"
     CDS             3027..3491
                     /locus_tag="PXF40_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HDL5803677.1"
                     /translation="MSSLIHDVQQHYSGADVVSFAFDYETVRLDKGDIKKKDIIYNYR
                     YAGGDVSMYELTGKQLKQYMEWSADYFDTIQAGDKDYRYNAVRGKSKYVTFDLFGGVS
                     YNIDLRNPSGSKIVDLKLANGSLITDDGKYKVGMNSYRFGQLTKKGGIWEGQ"
     gene            3522..3638
                     /locus_tag="PXF40_002393"
     CDS             3522..3638
                     /locus_tag="PXF40_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ser/Thr protein phosphatase"
                     /protein_id="HDL5803678.1"
                     /translation="MGAEKGTIQNMLIDYITNVKGGKIEGKSHNRWAIIGLN"
     gene            3654..4121
                     /locus_tag="PXF40_002394"
     CDS             3654..4121
                     /locus_tag="PXF40_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HDL5803679.1"
                     /translation="MNLKQSLIENNSILLNQSAANWEDAIKIGTDLLVKAGTIEPRYY
                     DNIVSKIKEMGPYIILAPGLAMPHARPEEGVIKTSFALVTFDTPIYFEGEDEPVHVML
                     TLAGSDSDQHMQGLVEITQVLDDPESDTGVDLDKIRRCKTAEEVYAVIDQALA"
     gene            4176..4856
                     /locus_tag="PXF40_002395"
     CDS             4176..4856
                     /locus_tag="PXF40_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HDL5803680.1"
                     /translation="MSKPLLQIALDSLSLEKAVADAKQAENQVEIIECGTILAFAEGM
                     KAVSTLRVLHPNHIIVCDLKTTDGGAILAKMAFEAGADWLTVSAAAHPATKAACKKVA
                     DEFNAAHPELKVKKEIQIEIYGNWTVEKDAKEWVELGVTQAIYHRSRDAELAGKGWTT
                     EDVELMKQLSDLGIELSITGGIVPEDIHLFKEIKNAKAFIAGRALVGEKGKQTAEAIR
                     VEIDKYWN"
     gene            complement(4924..6066)
                     /locus_tag="PXF40_002396"
     CDS             complement(4924..6066)
                     /locus_tag="PXF40_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HDL5803681.1"
                     /translation="MKIVIAPDSFKESLTALEVAQAIQQGFARVFPEAEYQLVPMADG
                     GEGSVQSLVDATHGSLQKISVIAPLANEVEGFFGLSGDQKTAFIEMAAASGLHLVPME
                     QRNPLVTTSYGTGQLIKAALDLGVEKIILGIGGSATNDGGVGMLQALGAKFLNAEQRE
                     IGFGGEALSQIQQIDLSGLDSRLKQVEFEVACDVDNPLCGERGASAIFGPQKGATPEM
                     VKMLDHALLHFAETVKSQLGIEIAEKAGAGAAGGMGGGLLLLPNVTLRSGVQIILEAT
                     DLAEKLADADLVVTGEGRMDAQSIAGKTPIGVAKVAKQFGKPVIAIVGSLKEDYPVVY
                     QHGIDAVFPIIRQVSNLEAVLKSGKENLISTAENVARLWKISALQE"
     gene            complement(6076..7455)
                     /locus_tag="PXF40_002397"
     CDS             complement(6076..7455)
                     /locus_tag="PXF40_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005757929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HDL5803682.1"
                     /translation="MSGIALILIFLVAIIIMIYMIAKWKVHPFLALMSISIALALVAG
                     LPLAKIPTIVGEGFSNTFKSIGIVIIFGAIIGTILEKTGAALKLADMVVKVVGQKRPE
                     LAMLIMGWVVGIPVFCDSGFVVLNPIREAIRKKILANPVGMAVALSAGLYASHVFIPP
                     TPGPIAAAGAVGLSHNLLLVIGMGFVVSIPVLIASYFFAKYVGKQVSVMEEAQADQVI
                     SQSYEDLIKQYGKLPSGFLSFAPIFMPIILMAIGSIAKIAGVSGDFGVFLQFVGNPII
                     ALAIGVIFAIFLLVSSGKMAEFDSLTNDTLKLVGPILFITAAGGVLGNVITQAGFVDY
                     IKQNAHIISTAGIFFPFLISAILKTAQGSSTVAIITTASIMGMFNAPDSLMNALGLTS
                     EMAAALTVMAIAAGSMCVSHANDSYYWVVTNFTKLTPQQGYRTQTTLTFIMGVVGMLT
                     VYLLSLILL"
BASE COUNT         2211 a         1737 c         1620 g         1948 t
ORIGIN      
        1 aaaaataatc ttttttaatc tttttctagc gtttatcatt aattccgaca acttctctgg
       61 agttttttag ttctattaat ctctcaacaa agaggccccc tatggacttt ttaaccgaaa
      121 ttctcctttt cttaaaggat caagtgctga ataaagcacc cttcttacta ggtatcgtag
      181 cttgcttagg ttacattctt cttaaaaaag acacttctac gattattaaa ggcacaatta
      241 aaacaattgt cggttttatg attgtacaag ccggttcagg tttcttagta accaacttta
      301 agccggttat tgatggctta gccaaatatc accaacttac cggtgcagta attgaccctt
      361 acaccagtat gcaatcgacc attcaaacca tgggcgagaa ctacgcttgg gttggttatg
      421 ccgtaattgg ggcgctgttc ctcaatattc tattagtggt gttccgccgt ttaaccggta
      481 tccgtaccat tatgctcacc ggtcacatta tgttccaaca agcaggcttg gttgcggtgt
      541 tctatatgat catcggagcg tcaatgtggg agaccattat ctacacctca gtgttgatgg
      601 ctctttattg gggtatttcg tctaatatta tgtataaacc aacccaagcg gtaacaggcg
      661 gtgcaggctt ctcaattggt caccaacaac aaattgcttc ttggattgca gtcaaactcg
      721 caccaaaact tggcgataaa gacgatactg tagataaaat gaaattgcct aactggctca
      781 atattttcca cgacagtatt tctgcaaccg cattagtaat gaccatcttc tttggaatca
      841 tcttactttc attcggttta gataacctca aagaacttgc tggcaaaacc aaccagttta
      901 tgtacattct tgaaatgggc ttgaaatttg cggtggcaat tcaaatcatt gtaaccggcg
      961 tacgtatgtt tgtagctgag ctttcagaag ccttcaaagg tattgctgaa cgcttaattc
     1021 caaactcagt attagcgatt gactgtgccg ctatctacgc tttctcgcca aatgcgatgg
     1081 tattcggctt tatgtggggg gctatcggtc aatttgtggc agtaggcggc ttgcttgcag
     1141 taggctcacc ggtgcttatt attccgggct ttatcccgat gttcttctct aacgcaacca
     1201 ttggtgtgtt tgcaaaccaa tttggtggtt ggaaagcagt aatgaaaatc tgttttgtga
     1261 tgggtattat tgaagtgctt ggctcagctt gggttattca aatgcttgct tcacaaggca
     1321 caacctttaa cggttggatg ggtatggctg actgggcatt gttcttccca ccaatcctac
     1381 aaggtattat cagcattccg ggcttcttct ttgtaattgt ggcagcagca atggtttata
     1441 tgttcttcgc atctaaacaa cttcgtgccg aagaagcaga agcggcagct cgtggcatta
     1501 cacttgaaca attagacggc tacggcttag atgaagtaaa agcagaacca aaagcggagg
     1561 cagtagtaca acaagcggtc gaaaatgccg aaaattctgc aaacccaatc cgcattctag
     1621 cggtgtgtgg ctctggtcaa ggctcatcaa tgatgatgaa aatgaagatc aaaggctatc
     1681 tcgacaaacg tggtattccg aatattatgg attcctgtgc ggtaactgat tacaaaggca
     1741 aattaagcga ggttgatatt attgtctcca gcaaacattt agccaacgaa atcgaagtac
     1801 cggaaggcaa agcggtatta ggtgtacaaa atatgctaaa tccaaactca tttggtgatg
     1861 aattagttga gctaatcaat cagcataatg caaaataagt aagtttaggg gtgaataatc
     1921 acccctatct atgctaaaga ttgtaaaaac tcacttcatc aaacgaggaa ttatccaatg
     1981 aaaaaaatct tatccaccct gtttatgctc tccgcggtta gcgttgccgt tgccaaagag
     2041 gtaaacatta aactacttgg tacctcagac gttcacggac gtgttgtgcc gtggagctac
     2101 ggggcagacg tggaagacaa atccggctca ttcgcccaaa ttgcaaccta tgtcaaagag
     2161 gtgcgtgcca accacaaaaa tgtgttgctg tttgatattg gcgatgcgat tcaagacaac
     2221 caagtcgaag agttcgctaa aaccttagac aaagcgaaaa acaatcccgt gccgaaagtg
     2281 ctgaatgcaa tgaattacga catcttcatt ctcggcaacc acgaatttaa cttcggaatg
     2341 ccgaatttag atgcgatttt aaaagacatc aacgccaaaa ttctcactgc caacttctat
     2401 cacaaagacg gcaaacgcta cgttgagcca actaccatca ttgaacgtga tggcgtaaaa
     2461 cttgggatta tcggcttaac caccccaatg tcggctattt ttgaaaaaga caccggtcat
     2521 ttagacgcaa tgaagttcac ttcgccgatt gaagaggcga aagcccaaat tgccgatctc
     2581 aaagccaaag gcgtggacgc cattattgtg ctggcacata tggggattga gaacgaaaac
     2641 aacattcccg acaccggcgt ggcggattta gtgaatgcag tggacggtat tgatgtaatt
     2701 atcgccggcc atatgcataa agatgtgccg agtgaaacta tcaaaaatac cctgattacc
     2761 gaaccgcacc gctacggcac agtggtttcc gaagttgatc ttgcctttga tgtgaatgac
     2821 aaaggcgaag tgaaactact ttctaaaacc gccaaaaccg taccggtgaa gaaactcgca
     2881 agcgatccgg aaatcgaaaa aatttaccaa ccgtatcaca atgaactgcg tgccttaaac
     2941 aacgtcaaaa tcggtgaaac tgcacaagat ttaatcccac aaggcaaaat cacggtgtat
     3001 cgattgcttt ctcgcaagac accggaatgt cctcattgat ccacgatgtg caacaacatt
     3061 acagcggtgc agacgtagtg agttttgcat ttgactacga aaccgtgcgt ttagacaaag
     3121 gcgacatcaa gaaaaaagac atcatctaca actaccgcta tgccggtggc gatgtgagca
     3181 tgtatgagct aaccggcaaa cagcttaaac agtatatgga atggtcagcg gattacttcg
     3241 acaccattca agccggtgac aaagactacc gctacaacgc tgtgcggggt aaatctaaat
     3301 acgttacctt cgacctattc ggcggcgtaa gctacaacat cgacctacgc aatccaagcg
     3361 gtagcaaaat tgtcgatcta aaactggcaa acggcagtct aatcaccgat gacggcaaat
     3421 acaaagtggg aatgaactcc taccgctttg gtcagctcac caaaaaaggc ggcatctggg
     3481 aaggacagta aatccccgtg atttgggaat ccaaagtcgc catgggggct gaaaaaggca
     3541 caatccaaaa tatgctgatt gattacatca ccaacgtcaa aggcggaaaa atcgaaggca
     3601 aatcgcataa ccgctgggcg attatcggct taaattaacg aaagggaaac actatgaact
     3661 taaaacaatc tcttattgaa aataactcta ttttgctcaa tcaatcagcg gcgaattggg
     3721 aagacgcaat caaaatcggc actgatttat tagtcaaagc cggtacgatt gaaccacgct
     3781 attacgataa tattgtaagc aaaatcaaag agatggggcc ttatattatt cttgcaccgg
     3841 gcttggcaat gcctcacgcc cgtccggaag aaggtgtgat taaaacctct ttcgctttag
     3901 tgacttttga caccccgatt tattttgagg gcgaagatga gccggttcac gttatgctaa
     3961 cccttgcagg gagtgactct gatcagcata tgcaaggctt ggtagaaatc acccaagtgc
     4021 tagatgaccc agagagcgac acaggtgttg atttagataa aatccgccgc tgtaaaacgg
     4081 ctgaagaagt gtatgcagta atcgatcagg cattagccta atattctaca agcggttcaa
     4141 aaacatcaat attttgcaaa tagaggaata caattatgtc caaaccatta ttacaaattg
     4201 cccttgattc tctttcactg gaaaaagcgg tggcggatgc aaaacaagca gaaaaccaag
     4261 tcgaaattat tgaatgcggt actattcttg cttttgctga gggtatgaaa gccgtttcca
     4321 ccttgcgtgt attgcaccca aatcacatta ttgtgtgcga cttaaaaacc accgatggcg
     4381 gtgcaatttt agctaaaatg gcatttgaag ccggtgccga ctggctcacg gtttcggctg
     4441 cggctcaccc tgcaaccaaa gcggcttgca aaaaagtggc ggacgaattt aacgctgctc
     4501 acccggagct aaaagtgaaa aaagagattc aaattgaaat ctacggcaac tggacggtgg
     4561 aaaaagatgc caaagagtgg gtagaattag gggtaaccca agcgatttac caccgctccc
     4621 gtgatgcgga actagcaggt aaaggttgga caacggaaga tgttgagtta atgaaacagc
     4681 tttctgactt aggcattgaa ttatctatca ccggcggtat cgtaccggaa gatattcacc
     4741 tgttcaaaga gatcaaaaac gccaaagcct ttattgcagg ccgtgcttta gtcggtgaaa
     4801 aaggcaaaca aactgccgaa gccattcgtg tggagattga taaatactgg aactaatccg
     4861 gcattgaaac ccaataaaaa tggcgttctc tcaaccggaa cgccattttt tatctcattt
     4921 tttctattct tgcaaggccg atattttcca caatctcgct acattttcgg cagttgaaat
     4981 caggttctct ttgcctgatt ttaacaccgc ttctaaattg ctgacctgtc gaataatcgg
     5041 aaataccgca tcaatgccgt gttggtacac cacagggtaa tcttctttca atgagccaac
     5101 tatcgcaatc accggcttgc caaactgctt agcgactttc gccaccccaa tcggggtttt
     5161 accggcgata gattgagcgt ccattcgccc ttcccctgtc accaccaaat ccgcatcggc
     5221 aagtttctca gcaagatcgg ttgcctcaag aataatttgc acgccggaac gtaatgttac
     5281 gttaggcagt agcagtaaac caccgcccat tccaccggct gcaccggcac cggctttctc
     5341 ggcaatctca atgcctaatt gggattttac ggtttcggca aaatgcaaca gggcgtggtc
     5401 gagcatttta accatttccg gtgtagctcc tttctgtggc ccaaaaattg ccgaagcccc
     5461 tcgctcgcca cacagcggat tatcgacatc gcaagcaacc tcaaattcca cttgctttaa
     5521 gcgtgaatcc aaaccgctta aatcaatctg ctgaatttgg cttaatgcct cgccaccaaa
     5581 gccgatttcc cgctgttcgg catttagaaa tttcgctcct aaggcttgta gcattccgac
     5641 accgccatcg ttagtcgcac tgccgccaat gccgagaatg attttttcca cccctaaatc
     5701 taaggcggct ttaattaact gccccgtgcc gtagctggtg gtaaccagcg gatttcgttg
     5761 ctccattggc actaaatgca agccacttgc cgccgccatt tcaataaagg cggttttttg
     5821 atcccccgac aagccaaaaa agccctccac ctcatttgca agcggtgcaa ttacgctgat
     5881 tttttgcaaa ctgccgtgag tggcatcaac cagcgactgt accgagcctt cgccaccgtc
     5941 tgccatcggt acgagctgat actccgcctc agggaaaaca cgggcaaaac cctgttgaat
     6001 tgcttgagcc acttctaatg cggtcaaact ctctttaaat gaatccggtg caatcacaat
     6061 tttcatcgtc aatccttaga gtaaaatcaa tgaaagcaga taaaccgtga gcatacccac
     6121 cacacccata atgaaagtta gggtagtttg cgtacgatag ccttgttgcg gagtcagttt
     6181 agtaaagttt gttaccaccc agtagtagct gtcattggcg tgggaaacgc acattgagcc
     6241 agccgcaatc gccattacgg ttaaggctgc cgccatttca ctggttagcc ctaaggcgtt
     6301 cattaatgag tccggtgcgt tgaacattcc cataatggag gcggtggtga taattgccac
     6361 cgttgagctg ccttgtgcgg tttttaaaat tgccgaaatc aggaacggga agaaaatccc
     6421 tgctgtactg ataatatgag cgttttgctt gatgtaatcc acaaagccgg cttgagtaat
     6481 cacgttacct agcacaccac cggcggcggt aataaagaga attgggccga ctaatttcag
     6541 ggtatcattg gttaagctgt caaattccgc cattttaccg cttgaaacca gtaggaaaat
     6601 agcgaagatc accccaattg ctaacgcaat aatcgggttg ccgacaaatt gtaggaatac
     6661 gccgaaatcg ccacttacac cggcaatttt ggcaatcgag ccgatagcca ttaagataat
     6721 cggcataaaa atcggggcaa agcttaaaaa cccacttggt aatttgccgt attgtttgat
     6781 cagatcttca tagctttggc tgattacttg atccgcttga gcttcttcca tcacgctgac
     6841 ttgtttgcca acatatttgg caaagaagta actggcaatc aacacaggaa tcgaaaccac
     6901 aaagcccatt ccgatcacaa gcaggagatt atggcttaaa ccaacagcac cggctgctgc
     6961 aatcgggccc ggtgtcggag gaataaagac gtgggaggca tataaaccgg cacttaacgc
     7021 caccgccatt cccaccggat tggcaagaat ttttttgcga atagcttcac gaatcgggtt
     7081 taacaccaca aagccgctat cacagaacac tgggatacca accacccagc ccataatcaa
     7141 cattgccagt tcagggcgtt tttgccccac cacttttacc accatatcgg ctaatttgag
     7201 ggctgcaccg gttttttcta aaatcgtgcc gataatcgcc ccaaaaataa tcacgatacc
     7261 gatacttttg aaggtattac taaaaccttc gcccacaata gttggaattt tggcaagcgg
     7321 taaacctgcc actaatgcaa gggctatcga aatcgacatt aaggctaaga acgggtgaac
     7381 tttccacttc gcaatcatat aaatcattat gatgatagcg accagaaaga tcagaataag
     7441 tgcaatacct gacataataa gtctcctcat tgtagaaaaa tgaacttatt attcggtatt
     7501 tattgctaaa aagatt
//
LOCUS       DANMCL010000110         7465 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.112, whole genome shotgun sequence.
ACCESSION   DANMCL010000110 DANMCL010000000
VERSION     DANMCL010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7465
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.112"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            7..507
                     /locus_tag="PXF40_002398"
     CDS             7..507
                     /locus_tag="PXF40_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HDL5803683.1"
                     /translation="MQTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQ
                     NGATYLRIAKKDIEYIRQYPKTCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGI
                     IEELRTEKYKISQKRATQIRNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLIL
                     HRRLTV"
     gene            795..2189
                     /gene="fumC"
                     /locus_tag="PXF40_002399"
     CDS             795..2189
                     /gene="fumC"
                     /locus_tag="PXF40_002399"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005567406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HDL5803684.1"
                     /translation="MEFRIEKDTMGEVQVPADKYWAAQTERSRNNFKIGPEASMPAEI
                     IEAFGYLKKAAAYANHDLGVLAVEKRDLIAKACDEILANKLDDQFPLVIWQTGSGTQS
                     NMNVNEVVANRAHVLNGGKLGEKSIIHPNDDVNKSQSSNDTYPTAMHIAAYKKVVEHT
                     LPCVKRLQKTLAEKAEAFKDVVKIGRTHLMDATPLTLGQEFSAYAAQLAFGIKALENT
                     LPHLRELALGGTAVGTGLNTPQGYDVKVAEYIAKFTGLPFVTAQNKFEALATHDAIVE
                     THGALKQLAVSLYKIANDVRLLASGPRSGIGEILIPENEPGSSIMPGKVNPTQCEAMT
                     MVCAQVLGNDVTISFAGTQGHFQLNVYKPVMAYNFLQSAQLLGDACVSFDEHCAVGIE
                     PNYPRIKQQLDQSLMLVTALNTHIGYENAAKIAKTAHKNGTTLKEEAINLGLVTAEQF
                     DEWVRPEDMVGSLK"
     gene            2316..2426
                     /locus_tag="PXF40_002400"
     CDS             2316..2426
                     /locus_tag="PXF40_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005696979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HDL5803685.1"
                     /translation="MKKLILIALVTTLGLSACGVKGPLYFPEQAPKHEQK"
     gene            2531..3781
                     /gene="lysA"
                     /locus_tag="PXF40_002401"
     CDS             2531..3781
                     /gene="lysA"
                     /locus_tag="PXF40_002401"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HDL5803686.1"
                     /translation="MNHFEYKNNQLFAEEVAIADIIEQYGTPAYVYSRSTLERHWHAF
                     NNAFGSHPHLVCFAVKSNSNIALLNVMARLGSGFDIVSQGELERVLAAGGEASKVVFS
                     GVAKSHSEIKRALEVGIRCFNIESVSELHRINQVAGELGKIAPISLRVNPDVDAHTHP
                     YISTGLKENKFGVSVTQAREVYRLAKTLPNVKITGMDCHIGSQLTELQPFLDATDRLI
                     ILMEQLREDGIELHHLDLGGGLGVPYNGEEPPHPTEYAKALLEKLKGYENLEIIIEPG
                     RAITANAGILVTKVEYLKQNEDRNFAIVDTGMNDMIRPALYEAYMQITEVDKTLNRDK
                     AVYDVVGPICETSDFLGKQRELAISEGDLIAIRSAGAYGAAMSSTYNSRPQAAEIMVD
                     GNQAHLIKARATFADLWRLEKLLP"
     gene            3795..4424
                     /locus_tag="PXF40_002402"
     CDS             3795..4424
                     /locus_tag="PXF40_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009875238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HDL5803687.1"
                     /translation="MKLYGLTGACSFVPHVALEWVKLRANQDYAFQAVSREFIKSAEY
                     LALNPRGNVPLLVDGDLALTQNQAIVHYLDELYPEAKLFGSKTARDKAKAARWLAFFN
                     SDVHKSFVPLFRLPSYAEGNETLTKTIRQQSAEQILEQLAFANAHLENHIFFGEEISV
                     ADAYLYIMLNWCRLLGLDFSHLSQLSAFMQRVEADQGVDNVREQEGLKG"
     gene            4495..5940
                     /gene="tldD"
                     /locus_tag="PXF40_002403"
     CDS             4495..5940
                     /gene="tldD"
                     /locus_tag="PXF40_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HDL5803688.1"
                     /translation="MLNQVSNSLLAPSGLELSHLTQVLDHFSGRHIDYADLYFQLSQD
                     ESWSLEDSIIKEGGFYIDRGFGVRAISGEKTGFAYADQITLKQLEQCAAAARSISPTS
                     GQLSVKNFKKTTACSRYPAINPLETISREQKVELLHLVDKTARMADPRVIQVNANLSA
                     VYEEMLVAATDGTLAADIRPLVRLSVSVLVEQNGKRERGSAGAGGRFGLDWFLAPSET
                     GFSRAESLTKEAVRQALVNLTAIPAPAGTMPIVLGAGWPGILLHEAVGHGLEGDFNRK
                     ESSLFSGKIGQMVTSELCTIVDDGTVPNMRGSITVDDEGVPSQRNVLIENGILKGYMQ
                     DKLNARLMGVAPTGNGRRESYAHLPMPRMTNTYLTEGNHEFEEMIESVEYGLYAPHFS
                     GGQVDITSGKFVFSTAEAYLIEKGKITKPVTGATLIGSGIEAMQQVSMVGKKMELDPG
                     IGTCGKEGQSVPVGVGQPTVKLDKITVGGRG"
     gene            6004..6885
                     /gene="prmA"
                     /locus_tag="PXF40_002404"
     CDS             6004..6885
                     /gene="prmA"
                     /locus_tag="PXF40_002404"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HDL5803689.1"
                     /translation="MAWVQIRLNSTDKQAEEISDFLTEIGAVSVTFMDSQDTPIFEPL
                     PGETRLWGNTDVVGLFDAETDMNLIVEALKTSKLVDENFAHKIEQIEDKDWEREWMDN
                     FHPMQFGKRLWICPSWREVPDPNAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLEGK
                     TVIDFGCGSGILAIAALKLGAKQAIGIDIDPQAILASQNNAEANGVAEKLQLFLAKDQ
                     PRELQADVVVANILAGPLKELAPNIITLVKPNGNLGLSGILATQAESVCEAYSEAFTL
                     DPVVEKEEWCRITGRKI"
     gene            complement(7060..7135)
                     /locus_tag="PXF40_002405"
     tRNA            complement(7060..7135)
                     /locus_tag="PXF40_002405"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7100..7102),aa:Trp,seq:cca)
     gene            complement(7201..7277)
                     /locus_tag="PXF40_002406"
     tRNA            complement(7201..7277)
                     /locus_tag="PXF40_002406"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7241..7243),aa:Asp,seq:gtc)
     gene            complement(7288..7403)
                     /gene="rrf"
                     /locus_tag="PXF40_002407"
     rRNA            complement(7288..7403)
                     /gene="rrf"
                     /locus_tag="PXF40_002407"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT         2227 a         1664 c         1646 g         1928 t
ORIGIN      
        1 acatatatgc aaacaatcaa tgaaattaaa gaagaaatct accctatatt tgagcctatc
       61 attggaacaa ttcggctaaa aacctacttt tcctactacg cagtttttaa ggatggattg
      121 atgattgcat tgtatcaaaa tggagcaact tatttacgta ttgcgaaaaa agatattgaa
      181 tacattcgtc agtatcctaa aacctgtatc ttatgcgatg aaaaaattgg tatacaaagt
      241 agaaaatttc attatattcc gcaagttctc atagatgata caccaaaatt tagctcgcta
      301 ctctttggaa ttatagagga actccgaacg gagaagtaca aaataagcca aaagcgagct
      361 acacaaatcc gaaacctacc aaatatgaat ttaaagttag aaagaatgtt gaaaaaaata
      421 gggattcatt ccattcatga ttttactcaa gaagggtata tgtcaacttt tatcaaactg
      481 attctccacc gaagacttac tgtttaagct aaacggagct ttaaatcacc aatatattta
      541 caccttcaca gatcaacaaa aaagggaact aatgcaagaa gcaaatcaag cgctatataa
      601 ttcaggccta agaaaaagat ttaacgccct gtagttaaat aatgtgatcc aaatcataaa
      661 atataaaaaa accaataagg aattgcaatt cgcagttcct ttctttttct tttatatgct
      721 agtatcacct tatacctcta aattattagt gcctactgat tttcaattaa tccaacaatt
      781 taggagagcg catcatggaa ttccgtatcg aaaaagacac aatgggcgaa gtgcaagttc
      841 ctgccgataa atactgggcg gcgcaaaccg agcgttcacg caataacttc aaaatcgggc
      901 cggaggcatc aatgccggcg gaaattatcg aggcgtttgg ctatctgaaa aaagcggctg
      961 cctatgctaa tcacgattta ggcgtactag cggtcgaaaa acgggattta attgcaaaag
     1021 cctgtgatga aattttggcg aacaaactcg atgatcaatt cccgctggtg atttggcaaa
     1081 ccggctcggg tacgcagtca aatatgaacg tgaatgaagt cgtggcaaac cgtgcacacg
     1141 tgttaaacgg cggcaagctg ggtgaaaaat cgattattca cccgaatgat gatgtgaata
     1201 aatcccaatc ttctaacgac acctacccaa ctgcaatgca catcgctgct tacaaaaaag
     1261 tggtggaaca caccctacct tgtgtgaaac gtctgcaaaa aaccttagcg gaaaaagccg
     1321 aagcctttaa agatgtggtc aaaatagggc gtactcactt aatggatgct accccgctca
     1381 cgctcggtca agagttctct gcctatgcag cacagttagc attcggcatc aaagcattgg
     1441 aaaacaccct gccacacctg cgtgagctgg cactcggcgg cacagcagtc ggcaccggct
     1501 tgaatacccc gcaaggttac gatgtgaaag tggcggaata cattgcgaaa ttcaccggtt
     1561 taccgttcgt taccgcccaa aacaaatttg aggcattagc gactcacgat gcgattgtcg
     1621 aaacccacgg tgcattaaaa cagcttgcgg tgtcgctcta caaaattgcc aacgatgtcc
     1681 gtttattagc ctccggtcct cgttcaggca ttggcgaaat tctgattccg gaaaacgagc
     1741 cgggttcatc aattatgccg ggtaaagtaa acccaaccca atgcgaagca atgacaatgg
     1801 tatgtgccca agtattaggc aacgatgtaa ccatctcttt tgccggcacg caagggcatt
     1861 tccaactgaa tgtctataaa ccggtgatgg cgtacaactt cctgcaatcg gctcaactgc
     1921 taggcgatgc gtgcgtgtcg tttgacgaac actgtgcagt cggcattgaa ccgaactacc
     1981 ctcgcattaa acaacagctc gaccaatcgc tgatgttagt gaccgcatta aatactcaca
     2041 ttggttatga aaatgcagcg aaaatcgcca aaactgccca caaaaacggc acaacactga
     2101 aagaagaggc gattaactta ggcttagtca cggcagaaca gttcgatgaa tgggttcgtc
     2161 cggaagatat ggttggcagc ttgaaataag cccaaccctt ctcttgtaat ctgatttaca
     2221 cctcaatcta ccggtaagat tgaggtgtaa ttttttatag cgagggtact gattttgttt
     2281 tagaatgaag catcattttt taagcggaaa aacctatgaa aaaactcatt ttaatcgcat
     2341 tagttactac tttaggctta agtgcttgtg gggtcaaagg cccactctac ttccctgagc
     2401 aagcccctaa acatgaacaa aaataagcat tgcaagcggt ctgttttggc taaaattttg
     2461 caaatttttg tgaaaaaatg accgcttgtt gcctcttttc tttcaaaatc ccaaacacaa
     2521 cggactttca atgaaccatt ttgaatataa aaacaaccaa ctttttgctg aagaagtcgc
     2581 tattgccgat attatcgagc aatacggcac gccagcttat gtttactcca gatctaccct
     2641 tgaacgccac tggcacgcat tcaataatgc gtttggctcg cacccacatt tagtttgctt
     2701 tgcagtcaaa tccaactcta acattgcctt gttaaatgta atggctcgtc tcggttcagg
     2761 ctttgatatt gtctctcaag gcgagttgga gcgtgtctta gctgccggcg gcgaagcctc
     2821 taaagttgtc ttttccggtg tggcaaaatc gcacagcgaa atcaaacgag cattggaagt
     2881 cgggattcgt tgctttaaca ttgaatcggt ttccgaactt caccgcatta accaagttgc
     2941 cggtgaacta ggcaaaatcg caccgatttc actgcgggta aacccggatg tggacgccca
     3001 cactcaccca tacatttcca ccggtttaaa agaaaacaaa ttcggcgtga gcgttactca
     3061 agcccgtgaa gtgtatcgct tagccaaaac cttaccgaat gtgaaaatta ccggtatgga
     3121 ttgtcacatc ggttcgcaat taaccgaatt gcaacctttt ttagatgcaa cggatcgctt
     3181 aatcatctta atggagcaac tgcgtgaaga cggcattgag ctacaccact tagacttagg
     3241 tggcggttta ggcgtgcctt acaacggcga agagcctccg catccgaccg aatatgccaa
     3301 agccttgctg gaaaagctca aaggctatga aaacttagaa atcattattg aaccggggcg
     3361 tgccattacc gcaaatgccg gtattttagt gacgaaggtg gaatacttga aacaaaatga
     3421 agatcgtaat tttgcgattg tcgataccgg tatgaacgat atgattcgcc cggctctgta
     3481 tgaagcctat atgcaaatta cggaagtgga taaaacctta aaccgtgaca aagctgttta
     3541 cgatgtggtc ggtccgattt gcgaaacctc ggatttctta ggcaaacaaa gagaattggc
     3601 aatttctgaa ggggatttaa tcgctattcg ttctgccggt gcttatgggg cggcgatgtc
     3661 ttcaacctac aactctcgcc cacaagcggc agaaattatg gttgatggca accaagccca
     3721 tttaattaaa gcccgagcca cttttgctga tttatggcgt ttagaaaaat tattacctta
     3781 atgaggaaga aaagatgaaa ttatatggat taaccggtgc ttgttcattt gtaccacacg
     3841 ttgccctaga gtgggtgaaa ttgcgtgcca atcaagatta tgcgtttcaa gctgttagcc
     3901 gtgaatttat taaatcggcg gaatatctgg ctttaaaccc tcgtggtaac gtaccattgt
     3961 tggttgatgg cgacttggcc ctcacgcaaa accaagctat cgtccactat ttagacgagc
     4021 tttatccgga agctaaatta ttcggcagca aaaccgctcg tgataaagcc aaagcggctc
     4081 gttggttagc ttttttcaat tcagatgtgc ataaatcatt cgtgccactg ttccgcttgc
     4141 caagttatgc ggaaggcaat gaaacgctca ccaaaactat tcgccaacaa tcggctgagc
     4201 aaattttaga acaactggct tttgcgaatg ctcatttaga aaatcatatt ttctttggcg
     4261 aagaaatttc ggttgccgat gcgtatctct acattatgct caactggtgt cgcctactag
     4321 ggttggattt ctctcatctt tcccaacttt ctgcctttat gcaacgagtg gaggcagacc
     4381 aaggcgtaga taatgtgcgt gagcaagaag gcttaaaagg ttaattcacc attgttcatt
     4441 taagacggta gattttatgt taaaatctac cgtcttttat ttttaggaat caccatgcta
     4501 aatcaggttt caaacagctt gcttgctcca agtgggcttg aattatcgca cttaactcaa
     4561 gtgttagatc acttctccgg ccgtcatatt gattatgccg atctctactt ccaactcagc
     4621 caagacgaaa gctggagctt ggaagacagc atcatcaaag aaggcggttt ttatatcgac
     4681 cgagggttcg gtgtgcgagc catatcaggc gaaaaaaccg gctttgccta cgccgatcaa
     4741 atcacgttaa aacagcttga gcaatgtgcc gctgccgcac gttcaatcag cccaacaagc
     4801 ggtcaattat cggtaaaaaa tttcaaaaaa acgaccgctt gttctcgcta cccggcaatc
     4861 aacccgctag agaccatcag ccgtgaacaa aaggtcgaat tgctccattt ggtggataaa
     4921 accgctcgaa tggcagatcc gagagtgatt caagtgaatg cgaatctctc agcggtatat
     4981 gaagaaatgt tagtggcagc gactgacggc acactggctg cggatattcg cccgttagtg
     5041 cgtttatctg tgtcggtact ggtggaacaa aatggcaagc gtgaacgagg ttcagcaggt
     5101 gccggtggtc gctttggttt agattggttc ttagcaccaa gcgaaaccgg ctttagccgt
     5161 gcggaatcgc ttaccaaaga agccgttcgc caagccctcg ttaatctcac agccattcct
     5221 gcaccggcag gcacgatgcc gattgttctc ggtgctggct ggccgggcat tttgctccac
     5281 gaagcagtcg gacacggctt ggagggtgat tttaaccgta aggaatcttc gctcttcagt
     5341 ggtaaaatcg ggcaaatggt cacctctgag ctttgcacca ttgttgatga cggtacggtg
     5401 ccgaatatgc gaggctcaat cacggtagat gacgaaggcg tgccttcgca acgtaatgtg
     5461 ttaattgaaa acggcattct aaaaggctat atgcaagaca aactcaatgc ccgcctgatg
     5521 ggagttgccc caaccggcaa cggcagacgg gaatcttacg ctcatttgcc gatgccacga
     5581 atgaccaaca cctacctcac cgaaggcaat cacgaatttg aagagatgat tgaatcggtc
     5641 gaatacggtt tatatgctcc tcacttcagt ggtggacaag tggatattac ctccggcaaa
     5701 tttgtgttct ccaccgccga agcctactta atcgaaaaag gcaaaatcac caaacctgtt
     5761 accggtgcaa ccctgatcgg cagcggcata gaagcaatgc aacaagtttc aatggtcggc
     5821 aaaaaaatgg aactcgaccc cggcatcggc acttgtggca aagaagggca atccgtacca
     5881 gtcggcgtag ggcagcctac agtgaagttg gataaaatta cggtgggggg aagagggtaa
     5941 tctctccccg tttgcaaaat ataaagaaaa tatcaccgct tgtagcgata aaaggaaaac
     6001 aaaatggctt gggtacaaat tcgtttaaac agtacagata aacaggctga ggaaatcagc
     6061 gattttttaa ccgagattgg agcggtgtca gtgactttta tggatagtca agatacccca
     6121 atttttgaac ctcttccggg ggaaacccgt ctttggggaa ataccgatgt ggttgggctt
     6181 ttcgatgcgg aaactgatat gaatcttatc gtagaagcac taaaaaccag caaattggtg
     6241 gacgaaaact ttgctcacaa aatcgagcaa atcgaagaca aagactggga acgggagtgg
     6301 atggataatt tccacccaat gcagtttggc aaacggttat ggatctgccc aagctggcgt
     6361 gaagtaccag acccgaatgc agtgaatgtt atgttagacc ctggtttagc atttggcacc
     6421 ggcacacacc caacgacctc gctttgctta caatggttag atagcttaga tttagaaggc
     6481 aaaacggtta tcgacttcgg ctgtggctcc ggtattttag ctatcgctgc acttaaactc
     6541 ggtgcaaaac aagccatcgg gattgatatc gacccacagg cgattttagc tagtcaaaac
     6601 aatgctgagg cgaacggcgt agcagaaaaa ctacaactat tcttagccaa agatcagcca
     6661 agagagttac aagccgatgt cgttgttgcg aatattctag ccggcccact caaagagtta
     6721 gcaccgaata tcatcacgct ggttaaacca aacggcaatt taggcttatc cggcattctt
     6781 gctactcagg ctgaaagtgt gtgtgaggct tatagcgaag cctttacgct agaccctgtt
     6841 gtagaaaaag aagaatggtg tcgtattaca ggccgcaaaa tctaatataa gaagccctgt
     6901 tttaaacagg gcttactttt tgataaattc tactactctt tacctgtctt gggaatcgtt
     6961 ctccctaaat taattaacac aagcggtaga aataacagga aaatttacaa attacataaa
     7021 tgaaaaaagc cgactgaaat cagtcggctt tctaaataat ggcaggggcg gagaggctcg
     7081 aactcccaac acccggtttt ggagaccggt gctctaccaa ttgaactacg cccctattga
     7141 taggtattca ttttgcactt ataggggcga attactattc gcccctgcat taaagattat
     7201 tggcggaacg gacgggactc gaacccgcga ccccctgcgt gacaggcagg tattctaacc
     7261 agctgaacta ccgctcctaa attaatagat tgataatgcc ctactctcac atggcgaatc
     7321 accacactac catcggcgtt actgcgtttt acttctgagt tcggtatgga gtcaggtaga
     7381 gccacagcac tctggttatc aatcaaattc tttcatttag tcagtttact aaaatatagt
     7441 ttatactttc taataaactc actaa
//
LOCUS       DANMCL010000111         7087 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.113, whole genome shotgun sequence.
ACCESSION   DANMCL010000111 DANMCL010000000
VERSION     DANMCL010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7087
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.113"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            6..266
                     /locus_tag="PXF40_002408"
     CDS             6..266
                     /locus_tag="PXF40_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excalibur calcium-binding domain-containing
                     protein"
                     /protein_id="HDL5803690.1"
                     /translation="MKKLVLSILFVISPMALAYSCNDPIPYCKEMQSCEQAKFYLNQC
                     NAGRLDRDNDGIPCENVCGKKGKSEKKDDKKSDKSKSKKTSN"
     gene            298..1107
                     /locus_tag="PXF40_002409"
     CDS             298..1107
                     /locus_tag="PXF40_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5803691.1"
                     /translation="MMNNQSVWHLFCDESGISGKPFYAFGALWIREDKISLFEKEIQK
                     LREKHYCTDEIKWQGTNSKRFSEFYRELVSFFFQADYLFFNCIVVQQAIVNKAFHNGD
                     YEMAKQKHFNLLICNKIEQSLYKNRINRFVLSVDDLPFKYNKADEAMHIIANNIIRKK
                     TAVANAILALNEVDSRKSSGVQLCDLLLGAILSSYQNDITSERKKELTKWIALHLGWD
                     KLTYDTLQEEKKFNIWYFYDPTKGPRIVRTRETKLKYPLLKKKEQTFQPAR"
     gene            complement(1290..2528)
                     /locus_tag="PXF40_002410"
     CDS             complement(1290..2528)
                     /locus_tag="PXF40_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HDL5803692.1"
                     /translation="MDFLTELTNHNHRTPAVSVTVRPKPSKDNEGEKAKDISTLITHR
                     LIQLTLTDNRGFEADQLDLELDDTDGLLALPSRGAILSVGLGWQNSPLTYKGEYTVDE
                     LTHDGPPDKVTIRARSADLRGTLTNRHERSFHRTTIGKIVKQIAEENKLKPMVGKEFE
                     NEEVKHIDQTNESSINLLQRLAEQFDAIATVKNGNLIFIKAGNATTASGKLLPLFRIT
                     RSSGDSHSFSIAEGDNYKAVKAYWHNTQTGKRGEVTWDENSQVKKVTKPTMRKKTKVK
                     RGADGKPIKGKDGKSIKETVFVKGKGRQVNAVVQSKPIESDSEAIKTLPHTYATAQSA
                     INACKRNFEKLQRGVATFSLTLAEGNAELIPELPVQVSGFKAEIDSNEWIISQVTHSL
                     NKGGGFTTALEMELKPKSED"
     gene            complement(2528..2965)
                     /locus_tag="PXF40_002411"
     CDS             complement(2528..2965)
                     /locus_tag="PXF40_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803693.1"
                     /translation="MLQQFAMMSLGYFVFMRLTIPYQDTSREMNWSHVQNDVVGAMPK
                     SQFTGKAGETMEISAELRPEITGGKMSILALEMMAEQGSAYPLISGSTFMVLGWFVID
                     RISEQETTFFADGTPRAISFSMSLKRVDDSLLANIIDEVAGFI"
     gene            complement(2967..3314)
                     /locus_tag="PXF40_002412"
     CDS             complement(2967..3314)
                     /locus_tag="PXF40_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803694.1"
                     /translation="MEIKTVTFSKVITAFIFHIITLFVFTQLNEQAQATFMFFWWFFI
                     SLRFILVVGIMCVGIEELKIQEYRQTKAYACFSFISNFALCLQFVYFEHLIAAILFLI
                     SYIIYHSQTVTIK"
     gene            complement(3378..3494)
                     /locus_tag="PXF40_002413"
     CDS             complement(3378..3494)
                     /locus_tag="PXF40_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HDL5803695.1"
                     /translation="MADIATVFHWTPNTFDEMTIVELGQWREKARLRNGVES"
     gene            complement(3518..3832)
                     /locus_tag="PXF40_002414"
     CDS             complement(3518..3832)
                     /locus_tag="PXF40_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HDL5803696.1"
                     /translation="MKKVTLKQGILRGEKRITEIEVRKPLTKQLRGTNLTSLMQLSVD
                     EWCIVLPRITTPKLDKADFATMSAADLLKLSGKALDLMSEDFDEADEEDSEEQGKGEI
                     LA"
     gene            complement(3911..4417)
                     /locus_tag="PXF40_002415"
     CDS             complement(3911..4417)
                     /locus_tag="PXF40_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HDL5803697.1"
                     /translation="MGLPAKLKNFNFSVDGTSYLGETTEVTQPKLAMQLEDYRAGGMI
                     APVGVNMGLEKLELEFKIGGHEEDLLKLFGGSISGNAFRFNGAYQHDDDDSVDAVELV
                     CRGRIAEIDEGSSKAGDDTEHSYKASLTYYKKTVNGVDIIEIDTLNQIYIVDGKDRLA
                     EIRKAMGL"
     gene            complement(4426..5607)
                     /locus_tag="PXF40_002416"
     CDS             complement(4426..5607)
                     /locus_tag="PXF40_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HDL5803698.1"
                     /translation="MSILDTYLHGVEVVEVNAGGVTISTAATSVIGVVCTGDQADAET
                     FPLNTPVLITNPLNYLEKAGSTGTLRRTLNSIGSIVKTPTVIVRVAESDDSDTLTANI
                     VGTQENGKFTGIKALLTAQSTVFVKPKLLCVPQHDNQAVATELLSVAKKLNAFAFISD
                     NGATTKEQAYTYRQNFSQREGMMIFGDWKSYNTDKKAYDTDYAVARACALQAYIDKTV
                     GWHKNISNVELDGVTGITKAVEFDINESSTEANYLNEKGITICLNHNGFRYWGSRTLA
                     TDTRWAFQQSVRTAQIIKETIGAGLAWAVDMPLTPLRVKTMLEAINNKLRSWASGDDP
                     RILGARVWVAEEITADIIKSGKFVIKYDYHWIPSLESLGLEQRVNDEYVVDLVNTLKA
                     L"
     gene            complement(5809..6039)
                     /locus_tag="PXF40_002417"
     CDS             complement(5809..6039)
                     /locus_tag="PXF40_002417"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803699.1"
                     /translation="MRNKDNTASKQASKQASKQASKQASKQASKQASKQASKQSVAQF
                     KQAPLPFPAAVVTVVQCLRKSRKSVGVFGMRL"
     gene            complement(6029..6271)
                     /locus_tag="PXF40_002418"
     CDS             complement(6029..6271)
                     /locus_tag="PXF40_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803700.1"
                     /translation="MTKKHYCTGWRSAPANINSCCHQHDRDYGIRGTVTRADADKRLR
                     ECMIKNGNPIRAWLFWLVVRAFGWRFYKNKEIKIEK"
     gene            complement(6272..>7087)
                     /locus_tag="PXF40_002419"
     CDS             complement(6272..>7087)
                     /locus_tag="PXF40_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803701.1"
                     /translation="VTSGNPTDTGSNNVEFSNNQAKSIAISKYGSFDNPSLFIDNINF
                     INNILEPSEFNQDVYIDGTILKQCQFINNRCISKSKQYSVRLARNNPFLNLTFKSNKL
                     SDNPAIISGKQGVIFCDDLSLGVNKHRLRLRFSSPINFTVNQEWQKMPFDRVLNDING
                     HVDIVSGQFIARTGGTFHLKGKITVTNSSEDVLNLYQLRLLINNEEKERLINQSVSPK
                     NSKSNTNGMTTINFDTVVDLKVGDIVDLQYKTTHELTLLSDSFLSQIYVTQEF"
BASE COUNT         1966 a         1509 c         1417 g         2195 t
ORIGIN      
        1 tcataatgaa aaaattagtc ctctcgattt tatttgttat ttcgcctatg gctttggctt
       61 atagctgcaa tgaccctatc ccttactgca aagaaatgca atcttgcgag caagcaaagt
      121 tttatttaaa tcaatgcaat gccggtcgat tagatagaga taacgatggc ataccttgtg
      181 aaaatgtttg tggcaagaaa ggaaagtccg agaaaaaaga cgataagaaa tcagataaat
      241 caaaatctaa aaaaacttca aattagagac aggcgttgtg cctgattaaa aggggtaatg
      301 atgaataacc agtcagtttg gcacttattt tgcgatgaat ccggtataag cggtaagcct
      361 ttttatgctt tcggtgcatt atggataaga gaagataaaa ttagcttatt tgaaaaagaa
      421 atacagaaat tacgagaaaa gcactattgc actgatgaaa taaaatggca aggtacaaat
      481 tctaaacgct ttagtgaatt ttatcgtgaa ttggttagtt ttttctttca ggctgattat
      541 ttatttttta actgtattgt agttcaacaa gctattgtca ataaagcttt tcataacggt
      601 gattatgaaa tggcaaaaca gaagcatttt aatttattga tttgcaacaa aattgaacaa
      661 tccttatata aaaacagaat aaataggttt gttttatctg ttgatgatct accttttaaa
      721 tacaataaag ctgatgaggc aatgcacatt atcgctaata atataattcg taaaaagact
      781 gccgtagcaa atgctattct agcattaaac gaagtagatt ctcgtaaatc atctggcgtt
      841 caactatgcg atttattatt aggagcaata ttaagtagct atcaaaatga tattacatcg
      901 gaacgtaaaa aagaactaac aaaatggatt gctttgcacc taggttggga taaattaact
      961 tatgatactt tacaggagga aaagaaattt aatatttggt atttttacga ccctacaaaa
     1021 ggacctagaa tagtaagaac gagagaaaca aaacttaaat acccactatt aaaaaagaaa
     1081 gagcagacct tccagcctgc acggtgagtg tcctcaagga cttatatgtg taaaacaacg
     1141 cccaatttcc tcactgggcg gaatcacaca aagtagccgc ccctatgatt ctttgtgttt
     1201 tatgtaaata aatctgtaac tttgattaat attacttgtt caagatcaga gatgcaaggc
     1261 ttttttatag tgattttata aaaatagcgt tagtcttcag acttcggctt caactccatc
     1321 tctaacgctg tcgtaaaccc accaccttta tttaaactgt gcgtaacctg cgaaattatc
     1381 cactcgttgc tatcaatctc cgccttaaag cctgaaacct gaaccggtaa ttcggggata
     1441 agctccgcat tgccctcggc aagagttagg ctaaaagttg ccacacctcg ttgtagtttt
     1501 tcaaaattcc gtttacaagc attaatcgct gattgtgcgg tagcgtaagt atggggtagg
     1561 gttttaattg cctcgctatc actttcaatc ggtttacttt gcaccactgc attaacttgc
     1621 ctgcctttgc cttttacaaa gacggtctct ttaatgctct tgccgtcttt gccttttatc
     1681 ggcttgccgt ctgccccacg ttttacttta gtctttttcc gcattgtggg cttagtcact
     1741 tttttaactt ggctgttttc gtcccacgtc acctcgcctc gcttgccggt ttgcgtgttg
     1801 tgccaatagg ctttaaccgc tttgtagtta tccccttcgg caatcgaaaa gctatgggaa
     1861 tcccccgaac tgcgggtaat gcgaaacagg ggtaacagtt taccgcttgc ggttgtggcg
     1921 tttccggctt taatgaaaat caaattgccg tttttcacgg tagcaatggc atcaaattgt
     1981 tctgcgaggc gttgcaagag attaatagag ctttcgtttg tttggtcaat gtgtttcacc
     2041 tcttcgtttt caaactcctt gcccaccatc ggcttgagtt tgttctcttc ggcgatctgt
     2101 ttcacaattt taccaatggt ggtgcggtga aagctccgct cgtggcgatt ggtcagcgtg
     2161 cctcgcaaat cagcacttct tgcccgaatc gtgactttat caggtgggcc atcgtgggtt
     2221 agctcgtcca ccgtgtattc gcccttgtag gtcagggggc tgttttgcca gcctaacccg
     2281 accgataaaa tcgctcctcg acttggcaaa gcgagtaagc catcagtgtc gtccagctct
     2341 aaatccagct ggtctgcctc aaagcctcgg ttgtcggtta aggtgagttg aattaagcgg
     2401 tgcgtgatca gggtggaaat atctttggct ttttcgccct cattatcttt gcttggcttt
     2461 gggcgaaccg tcaccgaaac agccggtgtg cggtggttat gattggttag ctctgttaaa
     2521 aaatccatta aataaaccct gcgacctcat caataatatt ggcgagcaga ctatcatcaa
     2581 cccgtttaag cgacatcgaa aagctaattg cccggggcgt gccgtctgca aaaaaggtgg
     2641 tttcctgctc gctgattcga tcaatcacaa accagcctag caccataaag gttgaaccac
     2701 taatcaacgg ataagccgag ccttgctctg ccatcatctc aagggcaagg attgacattt
     2761 tgcccccggt aatttcaggg cgtagctcgg ctgaaatctc cattgtctcc cctgccttgc
     2821 cggtaaattg gctttttggc attgccccaa ccacatcatt ttgaacgtgc gaccagttca
     2881 tttctcggct ggtgtcttga taagggattg tcaatcgcat aaacacaaaa tagcctagcg
     2941 acatcattgc gaattgttgg agcatattat ttaatcgtta cagtttggct atgatatatg
     3001 atgtaagaaa tcaaaaataa aattgccgca ataagatgct caaagtaaac aaactgcaag
     3061 cataacgcaa aattggatat gaaactaaaa caagcataag cttttgtttg tcggtattcc
     3121 tgaattttaa gttcttcaat accaacacac attattccaa ctacaaggat gaatcgcaga
     3181 gaaatgaaga accaccaaaa gaacataaag gtagcttgag cttgctcatt aagttgagta
     3241 aaaacaaata acgtaatgat atgaaaaatg aatgctgtaa tcactttact gaatgtaact
     3301 gttttaattt ccattttaaa atccttatag caagcggtcg agttttgcaa attttttgcg
     3361 aaaaacgacc gcttgtttta actttccacc ccatttcgta agcgggcctt ttctcgccat
     3421 tgccctagct cgacaatcgt catttcatca aaggtgttgg gtgtccaatg aaacacggta
     3481 gcaatatcag caatagcgtc atcaacaaac tgtggaatta ggctaaaatc tcgccctttc
     3541 cctgttcttc gctgtcctct tcgtctgcct catcgaagtc ttcgctcatt aaatctaagg
     3601 ctttgccgga gagttttagc aaatccgctg ccgacattgt ggcaaaatcg gctttgtcta
     3661 attttggcgt ggtaatgcgt ggcagtacaa tacaccactc atcaacgctt aactgcatta
     3721 atgaggtaag atttgtgcca cgcagttgtt tggttaatgg cttacgcacc tcaatctcgg
     3781 taatacgttt ttcaccacgc aaaatgcctt gttttaatgt tacttttttc attgtttaat
     3841 ccttaattat ttatcattaa aagccccttg aaaaaagggg aaggggcttt gggaaaattt
     3901 aggggaaaat ctataaaccc attgccttac gaatttccgc taagcggtct ttgccatcga
     3961 caatgtaaat ttggttgagg gtgtcgattt cgataatatc gacaccgttc accgtttttt
     4021 tgtaataggt tagcgaggct ttatagctat gctcggtgtc atcaccggct ttgcttgagc
     4081 cttcgtcaat ttcagcgatt cgcccacggc agactaactc taccgcatcg actgaatcgt
     4141 catcgtcgtg ctggtacgca ccgttgaaac ggaacgcatt accactgatt gagccaccaa
     4201 atagcttgag caaatcctct tcgtgtccgc cgattttgaa ctcaagctcc agtttctcta
     4261 aacccatatt gacacccaca ggggcaatca ttccgcctgc tcggtagtct tcaagttgca
     4321 tagccagttt cggctgtgtg acttcggtgg tttcgcccaa atagcttgtg ccgtccaccg
     4381 aaaaattaaa attcttaagt tttgccggta atcccatttt tacctctata acgctttaag
     4441 tgtattgact aaatccacta catattcatc attgacccgt tgctctaagc ctaggctttc
     4501 gagggacgga atccaatggt aatcgtattt aataacaaat ttgcctgatt tgataatatc
     4561 tgcggtgatc tcttcagcta cccacacacg agcacctaaa atgcgagggt catcacccga
     4621 tgcccaagag cgtagcttgt tgttaatcgc ctctagcatt gttttcacac gcaacggtgt
     4681 gagtggcata tccaccgccc aagctaagcc tgctccgatt gtctctttaa tgatttgagc
     4741 cgtccgcacc gactgctgaa acgcccagcg ggtatcggtg gcaagagtgc gggaacccca
     4801 atagcggaaa ccgttatggt ttaagcaaat ggtaatgcct ttttcgttca ggtagtttgc
     4861 ctcggttgag ctctcgttaa tatcaaactc taccgcttta gtgataccgg ttacaccgtc
     4921 tagctctacg tttgagatgt ttttatgcca gccgacagtt ttgtcgatat aggcttgcaa
     4981 cgcacaagct cgggccactg cataatcggt atcataggct tttttatcag tgttataaga
     5041 tttccagtca ccgaagatca tcattccttc acgctgagag aaattctggc gataggtata
     5101 tgcctgttct ttggtggttg caccgttgtc tgaaataaac gcaaacgcat tcagcttttt
     5161 agccacgctt aatagttcgg tcgcaacggc ttgattatcg tgctgtggta cacaaagcaa
     5221 tttcggctta acaaacacgg ttgattgagc ggttaataac gccttaatac cggtaaattt
     5281 gccgttttcc tgcgtgccga caatatttgc agttaaggtg tcgctatcgt ccgactcggc
     5341 aactcgcacg atcaccgttg gcgttttaac gattgagcca atcgaattaa gtgtgcggcg
     5401 taacgtgccg gtgctacctg ctttttcaag gtaatttaac gggttagtaa ttaaaacggg
     5461 cgtattcagc ggaaaagtct cggcatcggc ttggtctccg gtgcaaacta ctccgataac
     5521 cgaagtagca gcggtggaaa tggtgacacc acctgcattg acctcaacca cctcaacacc
     5581 gtgtagatag gtatctaaaa ttgacatagt attccttaat tgggaaaggt tagggttgaa
     5641 tgttggggta aactttaaaa aataaccgct cgggttgcga gcggttcggg ctgtgaaatg
     5701 gggtttaaca ggattaagtg atttcggtaa actccggtgg atactgtttt cgatacacct
     5761 ccgctttata ggctgcatag caatgctttt tatcaaaaaa caagccattc acaaacgcat
     5821 accaaaaacg ccaacgcttt ttcggctttt ccgcaagcat tgcaccacgg taacaacggc
     5881 tgctggaaaa ggtagcggag cttgtttaaa ttgcgctaca ctttgcttgc ttgcttgctt
     5941 gcttgcttgc ttgcttgctt gcttgcttgc ttgcttgctt gcttgcttgc ttgcttgctt
     6001 gcttgcttgc ttgcttgcag tattatcttt atttctcaat cttaatctcc ttatttttat
     6061 aaaaacgcca accaaaagct ctcacaacta gccaaaataa ccaagcccta attggattgc
     6121 catttttaat catacactca cgtaagcgtt tatcagcatc tgctcgtgtt actgtgccac
     6181 gaatgccgta gtctcggtca tgttgatgac agcaactgtt gatattggct ggtgcgctac
     6241 gccagcctgt gcagtagtgt tttttagtca cttaaaactc ctgagtcaca taaatttgag
     6301 ataaaaatga gtctgacagt aatgtcaact catgcgttgt tttatactgc aaatcaacaa
     6361 tgtcacctac ttttaaatca actacagtat caaaattgat tgttgtcata ccatttgtat
     6421 ttgatttgct gtttttaggt gaaacacttt gattaatcag tctttctttc tcttcgttat
     6481 ttattaacag cctgagttga tataaattca gcacatcttc cgatgaattt gtaaccgtta
     6541 ttttaccttt taaatgaaaa gtgccgcctg tccttgcaat aaattgacca ctgacaatat
     6601 caacatgacc attgatatca tttaacactc tgtcaaacgg cattttttgc cattcttgat
     6661 taacagtaaa attaatcggc gatgaaaatc gcaatcttaa tctgtgctta tttactccta
     6721 agctcaaatc atcgcagaaa ataacacctt gcttacctga tataatcgca ggattgtccg
     6781 ataatttatt actcttaaat gttaaattta agaacggatt attgcgagca agtctgacag
     6841 aatattgctt agacttgcta atacaacgat tattaataaa ttggcactgt tttaaaattg
     6901 tcccgtcaat atacacatct tgattaaatt cactgggctc caaaatgtta ttaataaaat
     6961 tgatattatc aataaacaat gaaggattat cgaaagaacc atatttcgat attgcaatag
     7021 attttgcttg attatttgaa aattctacat tgttgctgcc tgtgtcagtc ggattacctg
     7081 atgtgac
//
LOCUS       DANMCL010000112         6829 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.114, whole genome shotgun sequence.
ACCESSION   DANMCL010000112 DANMCL010000000
VERSION     DANMCL010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6829
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.114"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..618
                     /locus_tag="PXF40_002420"
     CDS             <1..618
                     /locus_tag="PXF40_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803702.1"
                     /translation="IIREDGSIELEGKESEEEFELEHIFKKYRFDSFSTYTGLISIYS
                     STFGSVNIESEIIKNGICLNFARQLISAKHPETKKRISLHLKILDFDKGRNTYLAPAD
                     LFILDEHLNEFILGNGGDEIEKISKNNKTQFSSTIRENQINFIRALLYMDYGIETPQE
                     VKNAINSGELGRKIEKFRRENPNIENDKNFKFPTSVTLSNWYSKA"
     gene            696..947
                     /locus_tag="PXF40_002421"
     CDS             696..947
                     /locus_tag="PXF40_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803703.1"
                     /translation="MQLQKTISTFTQPNHRGIYVMTYSEQSYLNVKDVCEMLQLNRST
                     IYRQIKQGIFPKPTKIGKSSRWKFADIKAFLEPKPQEAN"
     gene            947..1327
                     /locus_tag="PXF40_002422"
     CDS             947..1327
                     /locus_tag="PXF40_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5803704.1"
                     /translation="MAGLSIICPFCGNTARIRGSSRPSLLSYQAQLTCSNCGQLKADF
                     VGQLINIKRAVFIECDEANQWDKPENELIKEGKIQGKDNAQRLKELRGSQQDLFAKVP
                     GQLPPEKITPAEKIAKRANLSKTH"
     gene            1638..2699
                     /locus_tag="PXF40_002423"
     CDS             1638..2699
                     /locus_tag="PXF40_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ash family protein"
                     /protein_id="HDL5803705.1"
                     /translation="MKDLSPNQKQYTPFSAIMQKNLMDLLTKSARSPYSFSTVAKSTA
                     GRENPELHNTANSSTPLTRAIFIRSLHTPKERRNKACSSMVACSGQGSPLAVFGSPFV
                     AVFSPRYTLSPCTVRSVADSPLKLTNGLQKMNPSQITGKNRLNSFLFNNNQNDYSLLF
                     TNAKQSTPISAKISKNQDLCLTTLNRSPYASRAFAKSKAECGNSKEHQANNSTPLTRA
                     FFVRSSRTPKECQNKACSSMVACSGQGFALDCLPDVAVFHPVTRYRPTLWKMLAIAPK
                     NQHQELSKMKAFAYSFLCAIRTPETDTYQETVVRIISDSEQNARFQLTADYRLLLPRP
                     VAKIRLNSTAYTVKGGIYA"
     gene            2692..2856
                     /locus_tag="PXF40_002424"
     CDS             2692..2856
                     /locus_tag="PXF40_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803706.1"
                     /translation="MLNYSDIEQIRYFMDQAEEALDNNEEFKAVAELNTAQQFILALL
                     MNYEQGGENE"
     gene            2849..3484
                     /locus_tag="PXF40_002425"
     CDS             2849..3484
                     /locus_tag="PXF40_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803707.1"
                     /translation="MNNTTGQATQRNWQEIIANLQRLSESGESTIEIAKRYEAFSKTA
                     EQIQALVNNNGSEAEKEAFFAPVERFYLGLLETETRLKDAIAKDEENAQKLKEQKAAR
                     EAEQKRWDNLPFYAKDKFSDLICIESRETLEDKFFAISCMFDALKAVPNLLEIGLREE
                     GKDSVIDRLAEMSKLYLLFVDEQFSLLANEIQSGKYGKLDLNGSQNKGDLC"
     gene            3478..3696
                     /locus_tag="PXF40_002426"
     CDS             3478..3696
                     /locus_tag="PXF40_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803708.1"
                     /translation="MLTHRITLPDGTEIEFFAETDKETFAEIQRDLEGLKLPTFAEFV
                     AQERKKHRAKQAVKKARKIAKLARRKNR"
     gene            3838..4323
                     /locus_tag="PXF40_002427"
     CDS             3838..4323
                     /locus_tag="PXF40_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803709.1"
                     /translation="METALQLAQHLTGWTEEENSQAILKNFLDWKETFGEKTREETKI
                     VETLLDWINENEASFIEYPFNQEQRTPPKVAGYRILANNSTKTNEYFFIYPKQFKETL
                     AEFPLLMACTKLHEAGILHKPPRPEKGYEFQYTIAPKITGGSKKRAYKIVPIALEEEN
                     E"
     gene            5214..5693
                     /locus_tag="PXF40_002428"
     CDS             5214..5693
                     /locus_tag="PXF40_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HDL5803710.1"
                     /translation="MARVTTELNNTQIKNAKAQTKDYKLMDGKGLFLLVKKNGSKLWR
                     FRYKKPITGKESDLGIGSYPETTLAQARTIREEYRALLAENIDPLEHRQRLEAEALAE
                     IENTFYKVCLKWRDKCESRVKNGELQALTLKKNWRILEKYLLPCRLLYSKHHAKTSY"
     gene            5662..6426
                     /locus_tag="PXF40_002429"
     CDS             5662..6426
                     /locus_tag="PXF40_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005704989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5803711.1"
                     /translation="MPNITPKLVINALEPAKEKGIGDTLKRAIRLLNEVMNFAVNADV
                     IEFNKCQNVGSNFSVAKSEHNPTIHPKELPQFLAALRDYNLSFQTKMLIKWQLLTMTR
                     SREASETLWSEIDLEAKTWTISAERMKMKRPHVIPLSRQAVEILERMRKITGNSPFVF
                     QSEMKPRQPMNSQTANRAIGLLGYAGTLTAHGMRSIASTYLNEQLVNYDVVEACLAHV
                     IKDQTRKAYNRSDYLDQRVDVMQQWADYVESCSTGI"
     gene            6476..6766
                     /locus_tag="PXF40_002430"
     CDS             6476..6766
                     /locus_tag="PXF40_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803712.1"
                     /translation="MNNLSEFKLRYINNPYSNKDTFFIFDELSILLKSLTSDELKKIG
                     TAKNLADRQLNKQRKRCKRYVSEAYRLVEDNKEPYSKFFNHDGITAYNIKAF"
BASE COUNT         2461 a         1321 c         1268 g         1779 t
ORIGIN      
        1 atcataagag aagatggctc tattgaatta gaaggcaaag aatcagaaga agaatttgaa
       61 ttagaacata tatttaaaaa gtataggttt gatagtttca gcacttatac tggattaatt
      121 tctatttaca gcagtacttt tggtagtgta aatattgaat ctgaaatcat taaaaatgga
      181 atttgtttaa attttgcaag acaattaata tcagcaaagc acccagaaac aaaaaaaaga
      241 ataagtttac atctaaaaat actggatttt gacaaaggca gaaatactta tttagcacct
      301 gcagatttat ttattcttga tgaacatcta aatgagttca tattaggtaa cggcggagat
      361 gaaatagaaa aaatatcaaa gaataacaaa actcaattca gctcaacaat acgagaaaac
      421 caaatcaatt ttattagagc cttgctttat atggattatg ggatagaaac gcctcaagaa
      481 gtaaaaaacg ccattaattc aggggaacta ggcagaaaaa tagagaaatt taggagagaa
      541 aaccccaata tagagaacga taaaaatttc aaattcccta caagtgtaac ccttagcaac
      601 tggtattcaa aagcctaaaa tattggaaat ttccgaatct actttggaaa tttccaaact
      661 tctaaaacct actcacctca caatctcccc caacaatgca actacaaaag acaataagca
      721 cattcacgca accaaaccac agggggattt atgtaatgac ctattcagaa caaagctatt
      781 taaacgtgaa agatgtatgc gaaatgctac aactcaaccg ctcaactatt tatcgacaaa
      841 ttaagcaagg gattttccct aagccaacta agatcggaaa atcaagccgg tggaaatttg
      901 ccgacatcaa agcattttta gagccaaaac cacaggaggc gaactaatgg cagggctttc
      961 tattatttgc ccgttttgtg gcaataccgc acgaattaga ggcagttctc gccctagcct
     1021 tttaagttat caagcacagc taacttgttc aaattgcgga caattaaaag ccgactttgt
     1081 agggcagcta atcaacatca aacgggccgt atttattgag tgtgatgaag caaatcaatg
     1141 ggataaaccc gaaaatgaac taatcaagga gggaaaaatt caaggcaaag acaatgctca
     1201 acgcctcaaa gaactaagag gctcacagca agatttattt gcaaaggtgc cggggcaact
     1261 accgcccgag aagatcactc cggcggagaa aatcgccaag cgggcaaacc tttcaaaaac
     1321 gcattaaaca gggggataaa tggcaacaaa aaagccccgc aaggcaaacc atacggagct
     1381 attaaaatcg cataatgcga aagatatgca aagaaattaa agcaggcttg acgatttctg
     1441 aaggtgttag attctttcta aagtctttag ggataggttt atttctagca ttgttttttt
     1501 attttttgcc gtatttagca gaatttataa tcgccgtaaa aaaacaacta gcaaaaaaat
     1561 cggcttactt tcaatgataa aagcaagccg aaatgacaat ccaaattttt aactttaaat
     1621 aaagagtaca agaagaaatg aaagatttat ctccaaatca gaaacaatat acgccatttt
     1681 cggctataat gcaaaaaaat ttaatggatt tattgacaaa atccgcccgt tcgccttatt
     1741 ctttctctac cgttgcaaaa tcaacggcag ggcgtgagaa ccctgaacta cataatacgg
     1801 cgaacagtag cacgccttta acccgtgcta tttttattcg tagcttacac acacctaaag
     1861 aacgccgaaa taaggcgtgt tcgtctatgg tagcgtgtag cgggcaaggt tcgcccttgg
     1921 ctgtttttgg ttcgccgttt gtagcagttt tctcaccccg ttacacgcta tcgccctgca
     1981 ccgtgagaag tgtagccgat agtcctttaa aattaacaaa cggactacaa aaaatgaacc
     2041 ctagccaaat tacaggcaaa aaccgcctaa actcttttct atttaacaat aatcaaaatg
     2101 attattcgct attatttact aatgcaaaac aatcaacccc gatttctgct aaaataagca
     2161 aaaatcaaga tttatgcttg acaaccctca atcgttcgcc ttatgctagc cgtgcttttg
     2221 caaaatcaaa agccgagtgt ggaaactcga aagaacatca ggcgaacaat agcacgcctt
     2281 taactcgtgc tttttttgtt cgtagctcac gcacacccaa agaatgccaa aataaggcgt
     2341 gttcgtctat ggtagcgtgt agcgggcaag gtttcgccct tgactgctta cctgatgttg
     2401 cagttttcca ccccgttaca cgctatcgcc ctacattgtg gaaaatgtta gcgatagccc
     2461 ctaaaaatca acatcaggag ctatcaaaaa tgaaagcatt cgcttattca ttcctttgtg
     2521 ctattcgcac acccgaaaca gatacttatc aagaaaccgt agtacgcatt atttcagaca
     2581 gcgaacaaaa cgcccgtttt cagcttacag ccgattatcg cttactactc ccccgccctg
     2641 ttgcaaaaat ccgcctaaat tctaccgctt acacggtgaa aggggggatt tatgcttaat
     2701 tattccgata ttgaacaaat ccgctatttt atggatcaag ccgaagaggc tttagacaat
     2761 aatgaagagt tcaaagccgt agcagaactt aacacagcac aacaatttat tctggcttta
     2821 ttaatgaact acgaacaagg gggtgaaaat gaataataca acaggacaag ctacgcaaag
     2881 aaactggcaa gaaattatcg ctaatttgca gagactcagc gaatccgggg aaagcacaat
     2941 cgaaatcgct aaacgctatg aggcattttc taaaaccgcc gagcaaatcc aagccctagt
     3001 gaataacaac ggcagcgaag ccgaaaaaga ggcgtttttt gcccctgttg agcgttttta
     3061 tcttggctta ctagaaaccg aaacacgctt aaaagatgcc atagccaaag acgaagaaaa
     3121 cgcccaaaaa ttgaaagagc aaaaagcagc tagagaggca gagcaaaaaa gatgggacaa
     3181 cctacctttc tacgccaaag acaaattcag tgatttaatt tgcattgaaa gccgagaaac
     3241 gcttgaagat aaattctttg cgatctcttg tatgttcgat gccctaaaag ccgtacctaa
     3301 tctattagaa ataggcttgc gtgaagaagg caaagacagt gttatagacc gattagccga
     3361 aatgagcaaa ctctatttac tgtttgtaga tgagcaattt tcactactgg caaacgaaat
     3421 tcaaagcggt aaatatggca agttagacct aaacggctca cagaataagg gggatttatg
     3481 ctaacgcacc gcattacact ccctgacggc acagaaattg aattttttgc agaaaccgac
     3541 aaagaaacat ttgcagaaat tcaaagggac ttagagggct tgaaattgcc aacctttgcc
     3601 gagtttgttg cccaagagcg gaaaaaacac cgagcaaaac aagcggtcaa aaaagcccga
     3661 aaaattgcaa aattagcaag acggaaaaac cgctagcacc tatcaaaaag acttattatt
     3721 gcagaaaatc acgctttaat aaaaacgacc tataaagcaa tccgcaagaa atggttaagt
     3781 ttaactgaaa atatgagcgg acaggttcag cgggtagcgt gcgatagatt cgcaataatg
     3841 gaaaccgcct tgcagttagc ccaacattta acaggctgga cagaggaaga gaacagccaa
     3901 gcgattttaa aaaacttcct agactggaaa gaaactttcg gcgaaaaaac aagagaagaa
     3961 actaaaatag tagaaacctt gctagattgg ataaatgaaa atgaggcgag ttttatcgag
     4021 tacccattca accaagagca aagaacaccg cctaaagttg ccggctatag aatacttgcg
     4081 aataacagca ctaaaacaaa tgagtacttt ttcatttacc ctaagcaatt taaagaaacg
     4141 ctggcagaat ttccgctatt gatggcttgc accaagttac acgaggcagg gattttacat
     4201 aagccaccac gcccagaaaa aggctatgaa tttcagtaca caatagcccc taaaataaca
     4261 ggagggagca aaaaaagagc ttataaaatc gtaccgatag cattggaaga agaaaacgag
     4321 taattacagc aaaagcaaga gtttcaattc ttgctttttt tatacttcaa acaaaataaa
     4381 aataaataca aattaaaaat ttatagggaa aatagggaaa aaataagaag aatatagata
     4441 tatcaaggtt ttatagattt ttattttccc tattttatat aaaattttcc ctaaatcttc
     4501 ctattttttc cctatttatg cctatttttt ccctaaagct aaaatattga cttttcccct
     4561 acacaaggca aaaacagaaa aatagggaaa gaaaatccaa aaaataggga aaattcgggg
     4621 cattttaggg aaagtggaat tttttaacta tttgatatta ttatgttttt tgtaaatttc
     4681 ccctattttc cctattttcc ctattttccc taaacatttt acccaagcac agaaaaaata
     4741 tttttatgct gatgtatgaa aaatgaaatc ttgctgaagg gctgaatagt tgctgataat
     4801 agaatagaaa tgcaactagg aaagacaaac caacctagcc gcacaaatga acattttata
     4861 aacgaaaata aatagctttt atgtaaatga tccctaaaat gatccctatt tttgtagagt
     4921 ttattttatc tctttataaa tcaataagtt ataagcgagt tcagaggagg ctgggaccaa
     4981 cttaaatttt ccactcttat ttcttcattc gcattcttac gcaaaaccat tgatgatact
     5041 ggctttagag caattttaaa ttatttcttc attcgtattc tttcgtgttc ttgcgtttac
     5101 atccccttat tttaagggta tatttgaggg tataacgtaa aagggtatga aacccatacc
     5161 cttaaatccc ttatgattct gataaagcac aatgcgattt taggtaaatt tttatggcta
     5221 gagttaccac agaattaaat aacactcaaa tcaaaaacgc aaaggctcaa accaaagact
     5281 acaagctaat ggacggcaag gggctgtttt tgctggttaa gaaaaacggc tcgaagttat
     5341 ggcggtttag gtataaaaag ccgattaccg gcaaagagag cgatttaggc ataggcagtt
     5401 accccgaaac taccctagcc caagcaagaa cgattagaga agaatatagg gcattactag
     5461 cggaaaatat cgacccactc gaacaccgcc aaagattaga ggctgaagcg ttagccgaaa
     5521 tagaaaacac cttttataaa gtctgcttga aatggcgtga taaatgcgaa agccgtgtaa
     5581 aaaatggcga acttcaagcc ttaacgctga agaagaattg gcgaatcctt gaaaagtatc
     5641 ttttgccttg ccgactactc tattccaaac atcacgccaa aactagttat taatgcttta
     5701 gagcctgcta aagaaaaagg cataggcgac acccttaaac gagcaattag gctacttaat
     5761 gaagtgatga attttgcggt aaatgcggac gttatcgagt ttaacaaatg ccaaaatgta
     5821 ggctcaaatt ttagcgtagc gaaatctgaa cataacccaa cgatacaccc aaaagagcta
     5881 cctcaatttt tagctgcatt gcgtgattac aacctatcat ttcaaactaa gatgttgatt
     5941 aaatggcaac tattaacaat gacacgctca cgagaggcaa gcgaaacgtt gtggagtgaa
     6001 attgatttag aggcgaaaac gtggaccatt tcagccgaaa gaatgaagat gaaacgccct
     6061 cacgttatcc ctctttcacg gcaagcggtc gaaattttag aaagaatgcg aaaaatcaca
     6121 gggaatagcc catttgtttt tcaaagcgaa atgaaaccac gccaaccgat gaacagccaa
     6181 accgccaaca gagccatagg cttattaggc tatgccggca ctctaacggc tcacggtatg
     6241 cggtctattg cctcaaccta tttgaatgag cagttagtca attatgatgt agtagaggct
     6301 tgtttagctc acgttatcaa agaccaaacc cgaaaggctt ataaccgttc tgattattta
     6361 gatcagcgtg tagatgtaat gcagcaatgg gcggattatg tagaaagctg ctcaacgggg
     6421 atttagtaaa tttttggcgg aatttgaccg cttgtttaat tagaggtgta caaatatgaa
     6481 taacctttct gagtttaaat tacgatatat caataaccct tattctaata aagatacatt
     6541 ttttatattt gatgaattaa gcatactatt aaaatcactg acttccgatg aattaaagaa
     6601 aataggaaca gctaaaaatc tggcagatag acaacttaat aagcaaagaa aaagatgtaa
     6661 aaggtatgta tcagaggctt atcgtcttgt tgaagataat aaagaacctt actctaagtt
     6721 tttcaaccac gatgggataa ccgcatacaa tatcaaggct ttctaatcta tttagagagc
     6781 cttttttata tcgtcctgaa acctctttaa tgtgtattat gatcacaat
//
LOCUS       DANMCL010000113         6780 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.115, whole genome shotgun sequence.
ACCESSION   DANMCL010000113 DANMCL010000000
VERSION     DANMCL010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6780
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.115"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            21..1484
                     /gene="ubiD"
                     /locus_tag="PXF40_002431"
     CDS             21..1484
                     /gene="ubiD"
                     /locus_tag="PXF40_002431"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005617934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HDL5803713.1"
                     /translation="MKYKNLREFLDFLESQGELVRIQQEIDPYLEMTEIADRTLRKGG
                     PALLFENPKGYQMSVLCNLFGTPKRVALGMGQEDTKALRELGKLLAFLKEPEPPKGFK
                     DLIGQLPQWKQILNMPPKVLSKADCQQVVISGDEVDLYKLPIMHCWPGDVAPLVTWGL
                     TITQGPYKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWKAENPGKPFLVSVAI
                     GADPATILAAVTPVPDTLSEYAFAGLLRGHKTEVVKSISNELEVPASSEIVLEGYIDL
                     EETALEGPYGDHTGYYNEQEYFPVFTVTHITMRKDAIYHSTYTGRPPDEPAVLGEALN
                     EVFIPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYT
                     KFVIVCDDDVNARDWKDVIWAITTRCDPARDTTLIEHTPIDYLDFASPIAGLGSKMGI
                     DATNKWAGETTREWGTPIEKDDNVVKRIDEIWDSLGI"
     gene            complement(1569..2393)
                     /locus_tag="PXF40_002432"
     CDS             complement(1569..2393)
                     /locus_tag="PXF40_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5803714.1"
                     /translation="MDSLTHLFTQFQFRTDLFHLGQLCQIGSFNEENKGYLHFVRQGR
                     FILNQAAERPITIERPAIIFSPTNILHSLHPLDDSGLDIFCINFDFGKGIRNPLTHTL
                     HNIVILELAQYPELGVLADQIFSEVNQKGCGYQAMIHHLCAYFTLKVARQCLEKGYIQ
                     TGLLKGLADKQLGKVLLAIHNAPERDWNVEELANVALMSRSRFAAYFKQTMGVSPMDY
                     LTNWRLAVAQHLLQKGIPVALVAEQVGYSHNAALSRVFMRELGLSPTEWLAQNKES"
     gene            2520..3365
                     /locus_tag="PXF40_002433"
     CDS             2520..3365
                     /locus_tag="PXF40_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HDL5803715.1"
                     /translation="MMSQEQFEEINQERRQALNHGSRIAMAASVLGALGIASTANAKQ
                     ASAEKSPYAEPEQYGLKRHGMTIDPKRVALVVVDPQIDFLGPKGVMWGVLGDSIKENN
                     TVANIESLFKAAKAVDMPTFVSPHYYYPTDHKWEFGSPGEHFMHDSGMFARKGQYTME
                     GFENSGADFMPEYKPYIFDGKTVITSPHKIFGPETNDLVLQLRKRKIDQVILAGMAAN
                     LCIDSHLRELIEQGFEVTVVKDATAGPRIPEGDGYLAALTNYRIIANDLWTTEEAVKK
                     MTAKA"
     gene            3822..6764
                     /gene="rne"
                     /locus_tag="PXF40_002434"
     CDS             3822..6764
                     /gene="rne"
                     /locus_tag="PXF40_002434"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HDL5803716.1"
                     /translation="MKRMLINATQKEELRVALVDGQRLFDLDIESPGHEQKKSNIYKG
                     KITRVEPSLEAAFVDYGAERHGFLPLKEISREYFPSDYVFNGRPNIKDIIQEGQEVIV
                     QVSKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERLELKEALDCLDV
                     PEDVGLIVRTAGVGKSPEELQWDLKVLLHHWEAIKKAAESRPAPFLIHQESDVIVRAI
                     RDYLRRDIGEILIDNKKVFEKAKNHIRLVRPDFINRVKLYEGEVPLFSHYQIESQIES
                     AFQREVRLPSGGSIVIDVTEALTAIDINSSRSTRGGDIEETALNTNLEAADEIARQLR
                     LRDLGGLIVIDFIDMTPVRHQREVENRIREATRQDRARIQFARISRFGLLEMSRQRLS
                     PSLSEASSHICPRCQGTGKVRDNESIALSILRLLEEEAIKENTAQVHTIVPVQIASYL
                     LNEKRKAISSIEKRHDVQIVVVPSESMETPHFSVYRLRENEITPTLSYDLTKHYEARH
                     EEEHPHHHHQEDVLVTRNEPVITVESVLQSSELNLQPSPTPTEPPKPSLLSRLIATIK
                     GWFSEEKVEEKPKPKARNQRERRQRRERPNRNAKAENQERKTPQAQTTPAEEKPMRSE
                     KKARRAVVEEVSGVTEQESRSNSREVQTERRQRRDLRKKVRIETQEVEVENLTPAVEE
                     TVAKQVENVQKNQQIQPLATQEVPVETAPEVETTNEGRENNRQRRLPRHLRVGNQRRR
                     ENQRNQVISPMPLTSAVASPELASGKVWVQVTSTVKVEEKASFLSVDQMLEQQENQLV
                     ETEKKSEEKKLHTVSPLGGFVAQATNRDLVKEKQEQLSKPKEEKVASEDVKPVEVKEH
                     IAPFGSVVAQHSERDLVKEKNERVSKFQSQATVAPAIVEEVTNPIEVPKSTYESDYRF
                     NGRLGTFSRVEHTQAAMTIASAPSDKLEVVEISQWQNSKYYFYGKGFGGYTSAVSQVQ
                     SAPRSTNG"
BASE COUNT         2132 a         1473 c         1485 g         1690 t
ORIGIN      
        1 aatcgaaaaa tatgaccgct atgaagtata aaaatctccg tgaatttctc gatttccttg
       61 agtctcaggg tgaattagtc cgtattcagc aagaaatcga tccttattta gaaatgacag
      121 aaatcgccga ccgcacctta cgcaaaggcg ggccggcatt actgtttgaa aacccgaaag
      181 gctatcaaat gtcggtgttg tgtaatttat tcggcacgcc caaacgggta gctctgggaa
      241 tggggcaaga agataccaaa gctctgcgtg agctgggcaa gttacttgcc tttttaaaag
      301 agcctgaacc accgaaaggg tttaaagatt tgatcgggca actgccacaa tggaagcaaa
      361 ttttaaatat gccgcctaag gtactgagca aagccgattg tcagcaagtg gtgatttcgg
      421 gtgatgaggt tgatctctac aaattaccga ttatgcactg ttggccgggc gatgtcgctc
      481 cactggtcac ttgggggctg acgattacgc aagggcctta caaaaaacgc cagaatttag
      541 gcatttatcg tcagcaactt atcggcaaaa acaaactgat tatgcgttgg ctttcccacc
      601 gtggcggtgc gttagacttc caagagtgga aagccgaaaa cccgggtaaa ccgtttctgg
      661 tgtcggttgc gattggtgca gatccagcca ctattttagc ggcagtcacc cctgtgccgg
      721 atacgctttc ggaatatgcg ttcgcagggc tgttgcgagg gcataaaacc gaagtggtca
      781 aatctatttc caatgagtta gaagtgccgg caagtagcga aattgtgctg gagggctata
      841 tcgatctgga agaaaccgca ttggaaggcc cttatggcga ccacaccggc tactacaacg
      901 agcaagagta ttttccggta tttaccgtta cccatattac gatgcgaaaa gatgcgattt
      961 atcattctac ctacactggc agaccacctg atgaaccggc agtattaggt gaagcattga
     1021 atgaagtctt tattccgatt ttgcaaaaac agtttccgga aattgtcgat ttctacttgc
     1081 cacctgaagg ctgttcttac cgtttagcgg tagtgacgat gaaaaaacaa tatgccggac
     1141 acgctaaacg ggtgatgatg ggagtttggt cgttcctgcg tcaatttatg tacaccaagt
     1201 ttgtgattgt gtgcgatgac gatgtgaacg ctcgagattg gaaagatgta atttgggcga
     1261 tcaccacccg ttgtgacccg gctcgagata cgacactgat tgaacacacg ccgatagatt
     1321 atctcgattt tgcctcgcca attgcagggt taggctcaaa aatggggatt gatgccacca
     1381 ataaatgggc gggtgaaacc acccgagaat ggggaacacc catcgaaaaa gatgacaatg
     1441 tggtgaaacg cattgatgag atttgggatt ctcttggcat ttaaggcaac atttaaccgc
     1501 ttgtgcaaca taacaagcgg ttaaattttt tgacattttt accattcggc tatttgtttc
     1561 tcatcaggtt acgactcttt attttgagcc agccactcgg taggcgaaag ccctaattcc
     1621 cgcataaaga cacggctgag agcagcatta tggctataac cgacttgctc tgccaccaat
     1681 gctactggta tccctttttg taataaatgc tgggcaaccg ctagtcgcca gttagtgaga
     1741 taatccatcg gtgaaacccc catcgtttgt ttaaaataag cagcaaagcg tgagcgagac
     1801 attaatgcca catttgccaa ctcctctaca ttccaatctc gctctggtgc attgtgaata
     1861 gctaacagca ctttccccag ttgcttatct gccaagcctt ttaacaaacc tgtttgaata
     1921 tacccttttt ccaaacattg gcgggcaact ttcaaggtaa aataggcaca taaatgatga
     1981 atcattgcct gataaccaca ccctttctga ttcacttcac taaaaatttg atcggctaat
     2041 acccccaatt ccggatactg tgccaactct aagatcacaa tattgtgcaa ggtatgagtt
     2101 aatgggttgc gaatcccttt gccaaaatca aaattaatac aaaatatatc taacccacta
     2161 tcatctaacg ggtgcaaact atgcaaaata ttggttggtg aaaaaataat cgctgggcgt
     2221 tcaatcgtaa tcgggcgttc ggcagcctga tttaaaataa aacgtccctg acgaacgaaa
     2281 tgtaaatagc ctttattctc ttcattaaaa ctcccgattt ggcataactg acctagatga
     2341 aataaatccg tgcgaaactg aaattgggta aaaagatgag tcaaactatc cacattaagc
     2401 tccttgggta aagaattgag acgaacggtt aaaacaggag aaatgcgatc actataatag
     2461 caacccgttc ggtaacgcaa gttatcatta caatttgtat atctattaat gaggataaaa
     2521 tgatgtcaca ggaacaattt gaagaaatca accaagaacg ccgtcaagcc cttaaccacg
     2581 gctctcgtat tgcaatggca gccagtgtat taggtgcatt aggtattgca tcaacagcaa
     2641 atgcaaaaca agccagtgca gaaaaatcac cttatgccga gccggaacaa tacggtttaa
     2701 aacgccatgg aatgaccatt gatccaaaac gtgtggcatt agtggtagtt gatccacaaa
     2761 ttgacttcct aggcccgaaa ggcgtgatgt ggggcgtgtt aggtgactca attaaagaaa
     2821 acaacactgt agctaacatt gaaagcttat ttaaagcagc aaaagcagtc gatatgccaa
     2881 cctttgtttc gccacactac tattacccga ctgatcacaa atgggaattt ggttcaccgg
     2941 gtgaacactt tatgcacgac agcggaatgt ttgcgagaaa aggtcaatac accatggaag
     3001 gctttgaaaa ttcaggtgca gactttatgc ctgagtacaa accatacatt tttgatggca
     3061 aaacagtgat tacctctcca cacaaaatct ttggaccgga aaccaatgac ttagtgttgc
     3121 aattacgcaa acgtaaaatc gaccaagtaa ttttagccgg tatggctgcc aacttatgta
     3181 ttgattcaca cttgcgtgaa ttaatcgaac aaggttttga agtaacagtg gtgaaagatg
     3241 caaccgcagg gcctcgtatt cctgaaggtg acggctacct tgcagcatta accaactacc
     3301 gtattatcgc aaatgacctc tggaccactg aagaagcagt gaaaaaaatg acggcaaaag
     3361 cataatattc gctttacaag cggttaaatt tagctctttt tttgcaaatt taaccgcttg
     3421 gatttcacgc ttatctccag cactcacact aaatctcatt atttttcctt atcaccccat
     3481 tcattttcat tatattcatc tccacaacaa ataacagcta ccatacaaca attaccttgc
     3541 ctttttcagg gttaaaatgc gataatgact cgttattttt ggcttgaaaa agcaatagaa
     3601 aattgcaaaa aataaagcaa aaataaccgc ttgtaataga gataaacaag ccttaagtga
     3661 ttgattttgc agtttcttta agacaagaca aagtaaacgt aagacaacca tcaatgcact
     3721 atcgggaatg aagacagtcg tgagatagac attaaatcca ttcccttatt aatgggtcaa
     3781 aatgaccgtg taagacaaaa acaaaataat gagaaaacac aatgaaaaga atgttaatca
     3841 atgcaactca aaaagaagag ttgcgtgttg ccctcgttga tgggcaacgc ttatttgact
     3901 tggacattga aagcccgggt cacgaacaga aaaaatccaa tatctacaag ggtaaaatta
     3961 cccgtgtcga accaagcctt gaagctgcat tcgtagatta cggtgcagaa cgccacggct
     4021 tcctaccttt aaaagaaatt tcccgagaat acttcccgtc agactatgtg tttaacggtc
     4081 gcccgaatat caaagatatt attcaagaag ggcaagaagt gattgttcaa gtcagcaaag
     4141 aagagcgtgg taacaaagga gcagccttaa ccacctttat ttcgcttgcg ggcagttact
     4201 tagtcttaat gccgaacaac cctcgtgccg gtggtatttc ccgccgtatt gaaggtgatg
     4261 agcgtttaga actcaaagag gctttagact gcttagatgt accggaagac gtgggcttaa
     4321 tcgttcgtac cgccggtgtc ggcaaatcgc cggaagagtt acaatgggac ttaaaagtct
     4381 tgttacacca ctgggaagcg attaaaaaag cggcggaatc tcgcccagct ccgttcttaa
     4441 ttcaccaaga aagtgacgtg attgtgcgtg caattcgtga ctatctacgc cgtgatattg
     4501 gcgaaatctt aatcgacaac aaaaaagtgt tcgagaaagc caaaaaccac attcgccttg
     4561 ttcgcccgga tttcatcaac cgtgtgaaat tatacgaagg cgaagtacca ctattcagcc
     4621 actatcaaat tgaatcgcaa atcgaatcgg cattccaacg tgaagtgcgt ttaccttccg
     4681 gtggctctat cgttattgat gtaacagaag ccttaacagc aattgatatt aactcctcac
     4741 gttcaacccg tggcggcgat attgaagaaa ccgctcttaa caccaactta gaagcggcag
     4801 atgaaattgc ccgtcagtta cgtttgcgtg acttaggtgg tttgattgtg atcgacttta
     4861 tcgatatgac accggttcgc caccaacgtg aagtagaaaa ccgtattcgt gaggcgacac
     4921 gccaagaccg tgcgagaatc caatttgccc gtatttcccg tttcggtttg ttagaaatga
     4981 gccgtcagcg tttaagccca tcattaagtg aggcttcatc gcatatctgc cctcgctgtc
     5041 agggaactgg taaagtacgt gataatgaat caatcgcact gtcaatctta cgtttattag
     5101 aagaagaggc aatcaaagaa aacactgcac aggttcacac cattgtgccg gtgcaaatcg
     5161 ccagctactt actcaacgaa aaacgtaaag cgatttccag cattgaaaaa cgccacgatg
     5221 tacaaattgt tgtagtaccg tctgaaagta tggaaacgcc gcatttcagc gtatatcgcc
     5281 tgcgtgaaaa tgaaattact ccaacgttaa gctacgattt aaccaagcat tacgaagctc
     5341 gtcatgaaga agaacaccca catcatcacc atcaagaaga tgtgctggtt acccgtaacg
     5401 agccggtgat tacggtagag tcagtgttac aaagctcgga gctgaatctc caaccttcgc
     5461 caacaccaac cgaaccacca aaaccatcgc tgttaagccg cttaattgcg accattaaag
     5521 gctggtttag tgaagaaaaa gtggaagaaa aaccgaagcc gaaagcacgc aatcagcgtg
     5581 agcgtcgcca acgccgtgaa cgcccgaacc gtaatgctaa agcggaaaat caagagcgta
     5641 aaactccgca agctcaaact actccagcgg aagaaaaacc gatgcgtagc gagaaaaaag
     5701 cacgccgagc ggtagtggaa gaagtttccg gtgtaaccga gcaagagagt cgtagcaact
     5761 cccgtgaggt tcaaactgaa cgtcgccaac gccgtgatct acgtaaaaaa gtgcgtatcg
     5821 aaacacaaga agtagaagtg gaaaatctaa cacctgctgt tgaggaaacg gtggcaaaac
     5881 aagttgaaaa tgtgcaaaaa aatcaacaaa ttcaaccgct tgcaacccaa gaagtacctg
     5941 ttgaaacagc tcctgaggta gaaacaacga acgaaggacg tgaaaataac cgccaacgcc
     6001 gtttacctcg ccatttgcgt gtgggcaatc agcgtcgtcg tgaaaatcaa cgcaatcagg
     6061 ttatttctcc tatgcctcta acttcagctg ttgcttcgcc tgagcttgcg agcggtaaag
     6121 tttgggttca ggttacctct actgtcaaag tagaggaaaa agcatcattc ttatctgttg
     6181 atcaaatgct tgaacagcaa gaaaatcagc ttgttgagac agagaaaaaa tcagaagaga
     6241 agaagcttca tacagttagt ccgctaggtg gctttgtagc acaagcaact aaccgtgatt
     6301 tggttaagga gaagcaagaa cagctttcca aaccgaaaga agaaaaagtt gcttctgaag
     6361 acgtaaaacc agtagaggta aaagagcata ttgctccatt tggtagtgtt gttgctcagc
     6421 attctgaacg tgatttagtt aaagagaaaa atgagcgagt cagtaaattc caatcgcaag
     6481 caacggttgc accagcgatt gtggaagagg ttactaaccc gattgaagtg ccaaaatcaa
     6541 cttacgaaag cgattatcga tttaacggca gattaggtac attctctcgt gttgagcata
     6601 cccaagccgc tatgaccatt gcttctgcac caagtgacaa gcttgaagta gtcgaaatta
     6661 gccaatggca aaactctaaa tactatttct atggcaaagg gtttggcgga tataccagcg
     6721 cagtgagcca agtgcagtca gcgcctcgtt caaccaatgg ttaagtacaa ttaattggtt
//
LOCUS       DANMCL010000114         6630 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.116, whole genome shotgun sequence.
ACCESSION   DANMCL010000114 DANMCL010000000
VERSION     DANMCL010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6630
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.116"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXF40_002435"
     CDS             complement(71..1762)
                     /gene="dld"
                     /locus_tag="PXF40_002435"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HDL5803717.1"
                     /translation="MSNNSLISQLTEIVGQSYIITDPTKTEAYRSGYRFGTGSAIAVV
                     KPTTLLEYWNVLKACVAADVIVISQAANTGLTGGSTPSGNDYDRDIVIINTMRMNGIQ
                     LINNANQVVCLPGSTLNELELLLKTHGREPHSVIGSSCIGASVIGGICNNSGGALVQR
                     GPAYTEMALFAQLNEDGTLELKNHLGIDLGDTPEEILENLQAQRYQRKDIQQACGKGH
                     DHAYCNHVRQIDEDSPARFNADPARHYEAAGSAGKLAVFAVRLDTFPLEKDTAVFYIG
                     TNHTDTLNDIRRYMLANFEVLPISGEYIHRDAFDIAADYGKDTFWVIKKLGTHRLPQL
                     FSLKAKVDRMAKKLTFLPANLSDKILQAISKMLPQHLPESLRDYRNQYEHHLIIKMGG
                     KGVQEARDYLARYFADTQKGGYLECNPTESQAAMLHRFAVASAAIRYRAIHDKEVEDI
                     VALDIALRRNDKAWFEVLPPEIESQITHKLYYGHFMCHVFHQDYIVKKGVDCLALEHQ
                     MLELLDKRGAQYPAEHNVGHLYEAKPTLRKFYRQLDPTNSFNPGIGQTSKKKYWK"
     gene            complement(1974..3071)
                     /locus_tag="PXF40_002436"
     CDS             complement(1974..3071)
                     /locus_tag="PXF40_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5803718.1"
                     /translation="MFYSSNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTFYRYQQ
                     AVEQGGVEALLNQNRRVPNIKNRVDESTEKAVVQFALDNPAFGQVRVSNELRKQGIFV
                     SAGGFCLCRWFLSLQVVFVSAGGVRSIWLRHHLANFKQRLTALEKLVAEQGIILSEPQ
                     IQALERKKEDEIACGEIETAHPGYLGSQDTFYVGNIKGVGRIYQQTFIDTYSKVAFAK
                     LYTMKTAITAADMLNDKVLPFFESQRLPMLRVLTDRGSEYCGKVENHDYELYLAINDI
                     EHTKTKVKQPQTNGICERFHKTILQEFYQVAFRKRIYMDLEALQADLDEWLMYYNHHR
                     THQGKMCCGRTPMETLVDGKRIWAEKNLSSN"
     gene            3401..4117
                     /locus_tag="PXF40_002437"
     CDS             3401..4117
                     /locus_tag="PXF40_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3800 domain-containing protein"
                     /protein_id="HDL5803719.1"
                     /translation="MYLMYVDESGSTTDPTQKYFVLSGIAVFERNTHWIEKKMNVIAS
                     QFCQYSEGSDPYFYELHGSPMRSGKSEWRGIPMSERINAIQDCLKLVQSNNIRIFAAV
                     IEQGYSSGQDTITECFEQISSRFDMYLSRLHAQGNTQRGISIFDKSSTEKSIQALART
                     FKNSGHTYGKLRNFSEVPLFLDSKSSRLIQLADLVSYAIFRHYEHNDSSFYDIIRNNF
                     DYHNGRIHGLYLRNKEDIIS"
     gene            complement(4160..5078)
                     /locus_tag="PXF40_002438"
                     /pseudo
     CDS             complement(4160..5078)
                     /locus_tag="PXF40_002438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005700778.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
     gene            complement(5080..>6630)
                     /locus_tag="PXF40_002439"
     CDS             complement(5080..>6630)
                     /locus_tag="PXF40_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL5803720.1"
                     /translation="VHDIGKVVVDIEITLKDGSRWFAWNGLPPQPYKFKYIKGRDYHL
                     HPVLGGFLANQLIPKSAFDWLGQYPEVISSLMYAMSGHNDKAGLLSEIVQKADQHSVT
                     LALGGDVNKLVQRPVNSLSKQLVLALRYLLEQKIKLNTPKGPADGWFTEEGLWLVSKT
                     AADNIRAYLLGQGISVPKDNPKLFDEMQSLGIVEESPAGGAIWSCRIQADSGWTPANT
                     FTLLRIKPEVAWENINDRPNYFAGKVKIVEQITEESNIETQSTLVDGTTKPAPLPSVQ
                     TGGIIASKEVEISQVETNSDNAPSSEIIINDENDLTSFVLDMFAPTESSEPSLDDISI
                     GKGQEIASMPSKQEVQDKSTTKKLKVTQSAVETPETLTLSELQLQNKENSITGDNFVK
                     WLKSGIATNKFAINKPTAKLHIVEDHLFLVTPVIFEMYLQETGQPYDKETINNLQYDF
                     QGLGIHSPKNTMTNGKPDTINFWKCDVIGPRKTSSLTGYLIKNTRLFFGDKVLLNNHC
                     LTLQKEET"
BASE COUNT         1910 a         1346 c         1246 g         2128 t
ORIGIN      
        1 agcaactgtt ttgtccactt ggcatagttt ttgacggatc agcaactatt ttgtctacta
       61 tgcctttttg ttacttccag tattttttct tcgaggtttg cccgatcccc ggattaaagc
      121 tgttggttgg atcaagctgc cggtagaatt tgcgtaaggt cggttttgct tcgtaaagat
      181 gaccgacatt atgctccgca gggtattgtg ccccacgttt atccagtaat tctaacatct
      241 gatgttccaa cgccaaacaa tctacacctt ttttcacaat atagtcttga tggaaaacat
      301 ggcacataaa atgcccataa taaagtttgt gcgtgatttg actctctatt tccggcggta
      361 gcacttcaaa ccacgcttta tcatttcggc gaagggcaat atctaaagca acaatatctt
      421 ccacctcttt atcgtgaatg gctcgatagc gaatcgctgc cgaagcaacg gcaaaacgat
      481 gtaacattgc cgcttggctt tcagtcggat tacactccaa ataaccgcct ttttgtgtat
      541 cagcaaaata acgggcaaga tagtctcttg cttcttgaac gccttttcca cccattttga
      601 taattaagtg atgttcatac tggttacggt agtctcgaag actttccggc aaatgttgcg
      661 gtaacatttt tgagattgcc tgtaatattt tatcactgag atttgccggt aaaaaggtga
      721 gtttcttcgc cattctgtcc acttttgctt taagtgaaaa gagttgtggt aagcggtgtg
      781 taccgagttt tttaatcacc caaaaagtat ctttaccgta atcagcggca atatcaaagg
      841 catcacgatg aatatattca ccggaaatcg gcaatacctc aaagttggct aacatatagc
      901 gacgaatatc gtttaatgtg tccgtatgat ttgtcccgat ataaaaaaca gccgtgtctt
      961 tttcaagcgg aaaggtatct aatcgcaccg caaacaccgc taactttcct gcactaccgg
     1021 cagcctcgta gtggcgggca ggatcggcat taaaacgggc aggggagtct tcatcaattt
     1081 ggcggacgtg attacaatag gcgtgatcgt gtccttttcc gcacgcttgc tgaatatcct
     1141 tacgctgata acgttgggct tgcagatttt ctaaaatttc ttccggcgta tcacctaaat
     1201 caatacctaa atggtttttt aattccagcg tgccgtcttc atttaactgg gcaaacagtg
     1261 ccatttcagt ataagccggc ccacgttgca ctaatgcacc ccctgaatta ttacaaatac
     1321 caccgataac cgaagccccg atacaggacg atccgatcac cgaatgcggt tcacgtccgt
     1381 gcgttttcag caacaattcc agctcattta atgtcgagcc cggtaagcaa acgacttgat
     1441 tggcattgtt aattaactga atgccgttca ttcgcattgt gttaatgatc acaatatccc
     1501 gatcataatc gttgccgctt ggtgttgaac caccggttaa tccggtattg gccgcttgtg
     1561 agataacaat gacatcggcg gcgacacagg cttttaatac gttccagtat tctaataacg
     1621 ttgtaggttt taccactgca atcgcactac ccgtgccaaa gcgatacccg ctacgatagg
     1681 cttccgtctt agtcgggtca gtgatgatat aagactgccc gacaatttca gtaagctgag
     1741 aaatcagtga attatttgac attatgcttc cctcaaaggt agaaatagat agggcagtat
     1801 agcaataaac aaaagagagc aaagcagaat gttacaaaat tgtgaactac tgcacagaat
     1861 aaatgaagaa atgaagtaaa agaaagcgag ctaaaagagc gtcgcccgct ttatttgtag
     1921 aaaatcaaac ctaatctgac agtcccccgt ttaaaattac cgtgtctgtc agattaattt
     1981 gagcttaaat tcttttctgc ccaaatgcgt tttccatcaa ctaatgtctc catcggtgtt
     2041 cttccacagc acatttttcc ttgatgggtt cgatgatggt tataatacat taaccattca
     2101 tctaagtcag cttgcaatgc ctctaaatcc atataaatcc gttttctgaa tgccacttgg
     2161 tagaactcct gcaaaatcgt tttgtgaaaa cgctcacaga tgccgtttgt ttgtggctgt
     2221 ttcactttgg tttttgtgtg ctctatgtca ttgatagcca aataaagctc ataatcgtga
     2281 ttctcaactt tcccacaata ctcactgcct cggtctgtca gcactcgtaa cataggtaac
     2341 ctctggcttt caaagaatgg taatactttg tcatttagca tatcagcagc agtgatagcc
     2401 gtcttcattg tatacagttt tgcaaatgcc actttactat aagtatcaat aaacgtttgc
     2461 tgataaatac gacccacacc tttaatattg ccgacataaa aggtatcttg tgaccctaaa
     2521 tagccggggt gtgccgtttc aatttcacca caggcaatct catcttcttt cttccgctcc
     2581 aaggcttgta tctgtggctc actcagaata atgccttgct ctgccaccaa tttttcgagg
     2641 gcagttaagc gttgcttaaa attagctaag tgatgtctca accaaatgga acgtacacca
     2701 cctgcagaga caaaaaccac ctgcagagac aaaaaccacc tgcagagaca aaaaccacct
     2761 gcagagacaa aaatcccctg tttacgcagt tcattactca ctcgaacttg accaaaagca
     2821 ggattatcta aagcgaattg tacaaccgct ttttctgtgg attcatccac acgattttta
     2881 atgttgggaa cacgtcgatt ttgatttagt aatgcctcaa caccgccttg ttcgacagcc
     2941 tgttgatagc gataaaaagt atctcgactc atccccatta ccttacaggc ttgtgagata
     3001 ttacccagtt cttctgctaa atttaataaa ccggtcttgt gtttaataag tggattgcta
     3061 gaataaaaca tgagagtttc ctttttgttt agattgattt ttgacactca tattctaaac
     3121 gggaaactct cactttttag agtgaattgt cagatcaagt ctgatcttct acagacgatc
     3181 caggtcttac acattctttc aagtttgtaa agcctgaaaa ttatttttta tacttgattt
     3241 ttgtcaaaaa gtctctacac tatatggcag ggtcagtttt cgctgtttaa cggtgtttaa
     3301 tgagattttc attactggct ctccttaata gaaatttatg gaagagctat ctgatagagt
     3361 aatctagcga tagctctttt tcattgaaca aagaggctat atgtatctta tgtatgttga
     3421 tgagtctggt tctacgacag atcctactca aaaatatttt gtattatcag gtatcgctgt
     3481 atttgaacga aatactcatt ggattgagaa aaaaatgaat gtgatagcct ctcaattctg
     3541 tcaatattct gaagggagtg atccatattt ctatgagtta catggttcac caatgagatc
     3601 tggaaagagt gaatggagag gcattccaat gagtgagcgt attaatgcca ttcaagattg
     3661 cttgaaatta gttcaaagta ataatattcg tatatttgca gcagttatag agcaagggta
     3721 ttctagtggt caggatacta ttacagaatg ttttgagcaa atatcatctc gatttgatat
     3781 gtatctgagc cgtttacatg cccaaggtaa tacccaaaga ggcatttcta tctttgataa
     3841 atcatcgact gagaagtcaa tccaagcact tgcaagaaca ttcaaaaata gtgggcatac
     3901 ttatgggaaa cttagaaatt tctcagaagt tccattattt cttgactcaa agtcatcgag
     3961 attaattcag ctagcggatc tagtttccta tgcgatattt agacactatg aacacaatga
     4021 tagctcattt tacgatatta taagaaataa ctttgattat cataacgggc gtattcatgg
     4081 tttatattta cggaacaaag aagatattat ttcataaaaa ttcgccccaa aagggagaag
     4141 tatctccctt ttgtattttt tataacaaat taaccgtttc tctcaacatt tccacatcgt
     4201 gttcaatata tcctagtgtc acactgatat ctttatgccc taacagtttc tgaaccacat
     4261 aaacattttc gggcttcttc attaattgag tagcaactgt atgtcgaaat ctgtgtggtg
     4321 atgaagtaaa accgaccaag tcagaaatat gccgaaatat atgtgtaagc tgattttggc
     4381 tcatcggctg tcctcttctt cgagagcatc gagaaaataa attgagattg aacaattggc
     4441 aattatctgt ttgttttctt atttttaatt cagtaataag cctttctata tgaatataaa
     4501 gtgaatctga aatcggtacg atatggtaat catgattttt attgatttcc ggcgaaatat
     4561 aaatcgtcct attagaaaga tctacatcac taattttcag tttcactaat tgtcctcgcc
     4621 gaatccccgt acatctcaat gtcataataa ttgcaaggac aaaccagctt ggttttagaa
     4681 agtcaggtaa tacaacgtta ttattgagta tgtggtctat tttatgtaat tgttcggttg
     4741 aataagtttt ctttctcctt ttcgattctc gaataaataa ctgattaaat ggatttcgat
     4801 ttatattaag taatccttgc gatataccaa agttatataa ggcttttaaa tgtctgacat
     4861 aattattcca cgttactgct ttgattttat cgccaacaat ttgattacgc cattcaatga
     4921 gcatatcggt ggtaatgtca ttggcattta actttggata acgctttttg ataattcgga
     4981 ttacgttgtt gtagctccgt ttggtatccg gacgaagata gtgacgatag aaaaaaaaat
     5041 cggtctagta gcgaatcaaa agagatagaa gttatcattt taagtttcct ctttctgtaa
     5101 agttaaacag tgattattta atagtacctt atccccaaaa aagagacggg tattttttat
     5161 caaatatcct gttaaagagg aagtctttct cggtccaatg acatcacatt tccaaaaatt
     5221 gatggtatcc ggcttaccgt tggtcattgt gtttttaggt gaatgaatcc ctaatccttg
     5281 aaaatcatac tggagattat taattgtttc cttatcataa ggctgtccag tctcttgcaa
     5341 atacatttca aaaataacgg gggtaactaa aaacaggtgg tcttcaacaa tatggagctt
     5401 ggcagtaggc ttgttaattg caaatttgtt ggtcgcaata cctgatttga gccactttac
     5461 aaagttatct cctgtaattg agttctcctt attctgtaac tgtagctctg atagtgttaa
     5521 tgtttcgggc gtttctactg cactttgtgt tactttgagc tttttagtgg tagatttatc
     5581 ctgtacttct tgtttggatg gcatacttgc aatttcctgt cccttaccaa ttgaaatatc
     5641 atcaaggctt ggttcggaac tttccgtagg tgcaaacata tccagcacaa aggaggttaa
     5701 atcattttca tcatttatga tgatttctga ggatggtgca ttatccgagt ttgtctctac
     5761 ctgagatatt tcaacttctt tagaggcaat aatgccccct gtctgaacac tcggtaatgg
     5821 agctggttta gtggtcccat cgactaatgt agactgagtc tctatattac tttcttctgt
     5881 tatctgctcg actattttaa cttttccggc aaaataattt ggtcgatcat taatattctc
     5941 ccaagccact tctggtttaa ttctcaataa tgtaaaggta tttgctggcg tccaacctga
     6001 atcagcttga atacggcaac tccaaattgc tccaccagcc ggtgattctt ctacaatacc
     6061 gagagactgc atttcatcaa ataactttgg attatcctta ggcactgaaa ttccctgccc
     6121 cagtaagtaa gctcggatat tatcagcagc agttttgcta acaagccaca atccttcctc
     6181 agtgaaccaa ccgtctgccg gacctttggg tgtatttaac tttattttct gttccagcaa
     6241 ataacgtagt gccaagacca gttgctttga cagagaattg acaggacgtt gaaccagttt
     6301 atttacatcg ccaccgagtg cgagggtaac actatgctga tcggctttct gcacgatctc
     6361 agataaaagc ccggctttat cgttatgccc agacattgca tacatcagtg aagaaatgac
     6421 ttctggatac tgtcccagcc aatcaaacgc agattttgga ataagttgat ttgcaaggaa
     6481 gcctcctagc accggatgaa gatggtagtc tcgacctttg atgtatttga atttataagg
     6541 ttgaggtggt aacccattcc aagcaaacca acgtgaaccg tctttgagtg taatttcaat
     6601 atcaacgaca actttgccaa tatcgtgaac
//
LOCUS       DANMCL010000115         6581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.117, whole genome shotgun sequence.
ACCESSION   DANMCL010000115 DANMCL010000000
VERSION     DANMCL010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.117"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..225)
                     /locus_tag="PXF40_002440"
     CDS             complement(<1..225)
                     /locus_tag="PXF40_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803721.1"
                     /translation="MSTTLNEINITELDAGPEIKSLSLNDAVNSFLNDSACPICGKNC
                     QYWQRLKRSLNRKENQGKGDKVLVKNPSPIS"
     gene            complement(259..1545)
                     /gene="purD"
                     /locus_tag="PXF40_002441"
     CDS             complement(259..1545)
                     /gene="purD"
                     /locus_tag="PXF40_002441"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012771675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HDL5803722.1"
                     /translation="MNILIIGNGGREHALAWKVRQSPLADKVFVAPGNAGTAMENGIE
                     NVAISATDVPALVTFAKQNSVGLTIVGPEAPLVVGVVDAFRAHGLTIFGPTQAAAQLE
                     GSKAFTKDFLARHQIPTAEYQNFTEIEPALAYLKQKGAPIVIKADGLAAGKGVIVAMT
                     LQEAEDAVRDMLSGNAFGEAGSRVVIEEFLDGEEASFIVMVDGKNVEPMATSQDHKRV
                     GEGDSGLNTGGMGAYSPAPVVTKAIHQRVMDEIIYPTVQGMASENTPYTGFLYAGLMI
                     MPNGQPKVIEFNCRFGDPETQPIMMRLESDLVELCLKACEGKLDSVQSKWCEQAALGI
                     VLAAAGYPGDYRKGDEIIGIPTSTSNQKVFLAGVEQKEGKLLTNGGRVLCATALGNSV
                     FEAQQQALQLAEQIQWQGKFYRRDIGYRAVARKQAK"
     gene            1779..2153
                     /gene="rpsF"
                     /locus_tag="PXF40_002442"
     CDS             1779..2153
                     /gene="rpsF"
                     /locus_tag="PXF40_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011199651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HDL5803723.1"
                     /translation="MRHYEIVFMVHPDQSEQVPAMIERYTASVKEAGGQVHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQSVIDELETNFRYNDAVLRNLIVHTKAAVTEASPM
                     VKAKESKVAEAVAEVESEEAGE"
     gene            2128..2502
                     /gene="priB"
                     /locus_tag="PXF40_002443"
     CDS             2128..2502
                     /gene="priB"
                     /locus_tag="PXF40_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HDL5803724.1"
                     /translation="MNQRKQASNLPIDNCLILSGTVSSLVKQSLNPLGVPHYSFWLEH
                     RSIQTEVNLERQAWCKIQVVLAGNQFSYLTQQIKLGESVRIKGFIHTHKDFNGLNQLV
                     LHTEQIEFIDQEKPNGTLFPSS"
     gene            2477..2704
                     /gene="rpsR"
                     /locus_tag="PXF40_002444"
     CDS             2477..2704
                     /gene="rpsR"
                     /locus_tag="PXF40_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HDL5803725.1"
                     /translation="MARYFRRRKFCRFTAENVVEIDYKDIATLKNYISESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLALLPYTDNHQ"
     gene            2720..3169
                     /gene="rplI"
                     /locus_tag="PXF40_002445"
     CDS             2720..3169
                     /gene="rplI"
                     /locus_tag="PXF40_002445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011609589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HDL5803726.1"
                     /translation="MQVILLDKVAHLGSVGDQVTVKSGFARNFLIPQGKAVMATAANI
                     AHFEARRAELEAKAAAALATAQERAAKIAALAAVSVSATAGDDGRLFGSVSAKDIAEA
                     LTAAGVGVAKSEVRLGEGPLRTTGEHQVKIHLHPEVNATVAVNVVAE"
     gene            complement(3233..4009)
                     /gene="dnaQ"
                     /locus_tag="PXF40_002446"
     CDS             complement(3233..4009)
                     /gene="dnaQ"
                     /locus_tag="PXF40_002446"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HDL5803727.1"
                     /translation="MTEEKIIRQVVLDTETTGMNMAGGPPQIGHNIIEIGAVEVINRR
                     LTGRTYHVYIKPPREVDEEAIAVHGITNEFLQDKPVFAEIAEEFLDFIKGAELIIHNA
                     PFDVAFMDQEFSYLPNPPAKTAEMCTVTDSLQMARRMYPGKRNNLDALCDRLGIDNSK
                     RVLHGALLDAEILADVFLMMTGGQISLLGEEETEVVSEVIDIEEEFSAIVLNADEAII
                     LKANDEEEESHLALLKLIEKKSKGNCLWTKALTDTAEISH"
     gene            complement(4097..5767)
                     /gene="ettA"
                     /locus_tag="PXF40_002447"
     CDS             complement(4097..5767)
                     /gene="ettA"
                     /locus_tag="PXF40_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HDL5803728.1"
                     /translation="MSTQFVYTMHRVGKVVPPKRHILKDISLSFFPGAKIGVLGLNGA
                     GKSTLLRIMAGVDKEFEGEARPQPGIKIGYLPQEPKLAPQQTVREAVEEAVAEVKNAL
                     TQLDEVYAMYADENADFDKLAAKQAELEAIIQAHDGHNLQNQLERAADALRLPDWDAK
                     IEHLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDYEGTVVAITH
                     DRYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKEKRLAQEQAAESARQKSIEKELEW
                     VRQNPKGRQAKSKARMARFEELNSGEYQKRNETNELFIPPGPRLGDKVIEVQNLTKSY
                     GDRTLIDDLSFAIPKGAIVGIIGANGAGKSTLFRMLSGKEQPDSGSIVLGETVVMASV
                     DQFRDAMDDKKTVWEEVSNGQDILTIGNFEIPSRAYVGRFNFKGVDQQKRVGELSGGE
                     RGRLHLAKLLQRGGNVLLLDEPTNDLDVETLRALENAILEFPGCAMVISHDRWFLDRI
                     ATHILDYGDEGKVTFYEGNFSDYEEWKKKTFGEAATQPHRVKYKRIAK"
     gene            5973..6452
                     /locus_tag="PXF40_002448"
     CDS             5973..6452
                     /locus_tag="PXF40_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803729.1"
                     /translation="MYVQKHSNYSTALLVVIREKINSLPHQGLILDLISISKDDLDDI
                     LEGNTDMNIHQLLSLIYKAGFFDVLNITNNLCIKLSQFGFYFQNGNLSQKDDELLSLY
                     REFYKHNEFITHLKSHSLYGCIEQPTSAFFHYCTNENFRNAFNEESLYDFQMWNVFR"
BASE COUNT         1778 a         1462 c         1364 g         1977 t
ORIGIN      
        1 agaaattgga gatggattct tcacaagaac tttatctccc ttaccttgat tttcttttct
       61 atttaaagat ctttttagtc tttgccaata ttgacagttt tttccacata tagggcacgc
      121 agagtcattt agaaaagagt ttactgcatc gtttaatgat agtgatttaa tttcggggcc
      181 tgcatcgagt tcagtgatat taatttcatt aagtgttgta ctcataataa atttttcctt
      241 gttttaagag tttataaatt atttcgcttg ttttcttgcc actgctcggt agccaatatc
      301 tcggcgatag aatttgcctt gccattgaat ttgttcggca agttgtaagg cttgttgttg
      361 agcttcaaat acactgttgc caagtgcggt ggcacaaagt acacgtccac cgttggtgag
      421 cagttttcct tctttttgct caacccctgc taagaaaact ttttgattgg aggtagaggt
      481 cggaatgcct atgatttcat cgcctttacg gtaatcgccc gggtagcctg cggcagctaa
      541 aacaatgcct aatgcggctt gttcacacca ttttgattgc acgctatcca atttgccttc
      601 gcacgctttt aagcacaatt caacgaggtc tgattccaaa cgcatcataa tcggctgagt
      661 ttcagggtct ccaaaacggc agttaaattc aatcactttc ggctgaccgt ttggcataat
      721 cattaagccg gcatagagaa aaccggtgta aggggtattt tcgcttgcca ttccttgcac
      781 ggtcgggtaa ataatttcgt ccattacacg ttggtggatt gcctttgtta ccaccggagc
      841 aggggagtaa gcccccattc cgccggtatt taagccgcta tcgccctcgc caacacgttt
      901 gtggtcttgt gaggttgcca ttggttcgac atttttgccg tccaccatca caataaaact
      961 ggcctcttct ccgtctaaaa attcctcgat caccacacgg ctgccggctt caccaaaggc
     1021 gttgcctgac agcatatcac gcactgcatc ttccgcctct tgtaaagtca ttgcaacaat
     1081 tacgcctttg cctgcggcta aaccgtctgc tttgattaca atcggtgcac ctttttgttt
     1141 taagtaggca agtgccggtt caatttcggt gaaattttgg tattctgcgg ttggaatctg
     1201 atggcgagcc aagaaatctt tggtaaatgc tttagaacct tctaattgag cagcggcttg
     1261 ggtcgggccg aaaatggtta aaccgtgggc tcgaaaagca tcaaccacgc caactactaa
     1321 cggtgcttca gggccgacaa tcgtcaaacc tacgctattt tgtttagcga atgtaactaa
     1381 ggcaggcacg tcagtggcgg aaatagctac attttcaatg ccgttttcca tcgctgtgcc
     1441 ggcattgccg ggggcgacaa agactttgtc tgcgagcggc gattgacgaa ctttccaagc
     1501 aagagcgtgt tcacgcccac cgttgccgat aattaaaata ttcattggga ttccttgcaa
     1561 aaatgataaa gcaaacgttt gcgtattgta cttgatttgt ttatctgctg acaagcagtc
     1621 gtttttctcg gattttttgc aaaatacgaa attgttgctt gcaaaatagg cttttttcag
     1681 tataatcctg ccgttcagtc acattcgttt tttaatcctt gcttccacaa gttggtgact
     1741 ggctaaagtt ggaggctgct aacccgtaag gatagtcaat gcgtcactac gaaatcgttt
     1801 ttatggttca cccggaccaa agcgaacaag taccagcaat gattgagcgc tacacagcgt
     1861 ctgtaaaaga agctggcggt caagttcatc gcttagaaga ttggggtcgt cgtcaattag
     1921 catacccaat caacaaactt cacaaagcac actatgtgtt aatgaatgta gaagcacctc
     1981 aaagtgtaat cgacgagtta gaaactaact tccgttataa cgatgcagtt cttcgtaact
     2041 taatcgttca cactaaagcg gcagtaactg aagcgtcacc aatggtgaaa gcgaaagaaa
     2101 gcaaagttgc tgaagcggta gctgaagttg aatcagagga agcaggcgag taatttgccg
     2161 attgataatt gtttaatctt aagcggaacg gtttccagct tggttaaaca aagcctaaac
     2221 ccccttggtg tgcctcatta cagtttttgg ttagaacatc gttcaatcca aaccgaagtg
     2281 aatttagaac gccaagcgtg gtgcaaaatc caagtggttt tggcaggcaa tcaatttagt
     2341 tatttaaccc aacaaattaa gctcggtgag agcgtgagaa ttaaaggttt tatccatact
     2401 cacaaagact ttaacggttt aaatcagtta gtcttacaca ccgaacaaat tgaatttata
     2461 gatcaggaga agccaaatgg cacgttattt ccgtcgtcgt aagttctgcc gtttcacagc
     2521 ggaaaatgtt gttgaaatcg attacaaaga tatcgctaca ttaaagaact acatttctga
     2581 aagcggcaag attgttccta gccgtattac tggtactcgt gcgaagtatc aacgtcaatt
     2641 agctcgtgca attaaacgcg ctcgctacct tgcgttactt ccatatactg ataaccacca
     2701 ataatcagga gagagtacaa tgcaagttat tttattagac aaagttgctc acttaggttc
     2761 tgtgggcgac caagtaaccg ttaaatctgg ttttgctcgt aacttcttaa tcccacaagg
     2821 taaagcggtt atggcaactg cggcaaacat tgctcacttt gaagcacgtc gtgcagaatt
     2881 agaagcaaaa gctgcagcag cattagcaac tgcacaagaa cgtgcagcga aaattgcagc
     2941 attagcagca gtatcagtat ctgcaactgc aggtgatgat ggtcgtttat tcggttctgt
     3001 atcagctaaa gacatcgctg aagcattaac tgcagcaggt gttggagttg ctaaatctga
     3061 agttcgttta ggtgaaggtc cacttcgtac aaccggcgaa caccaagtta aaattcactt
     3121 acaccctgaa gtgaatgcaa ctgtagcagt aaacgttgtt gctgaataat cagtagaaat
     3181 agaaaaccca gcgaaagctg ggttttttgt ttgctttatt tattggttag aatcagtgag
     3241 atatttctgc tgtgtcggtt aatgcttttg tccataggca atttcctttg gattttttct
     3301 caatcagttt cagaagtgct aaatgcgact cttcctcttc atcgtttgct ttaagaataa
     3361 ttgcctcatc ggcatttaac acaattgcag aaaattcttc ttcaatatca ataacttcac
     3421 ttaccacttc agtttcttct tcgcctaata atgaaatctg accgccggtc atcattagga
     3481 atacatcagc taagatctcc gcatccagta acgccccgtg tagtacacgc ttgctattat
     3541 caatgccgag cctgtcgcaa agtgcatcta aattattccg tttgccgggg tacattcttc
     3601 gtgccatttg caggctatcg gttacggtac acatttctgc ggtttttgcc ggtggattag
     3661 gcagataaga aaattcttga tccataaacg ccacatcgaa gggggcattg tgaataatta
     3721 attccgcacc tttgatgaaa tccaaaaact cctcggcaat ttcagcaaaa acaggtttat
     3781 cttgcaaaaa ttcattggtg atgccgtgaa ctgcaatcgc ctcttcatct acctcacgcg
     3841 gtggcttgat ataaacgtga taagttctgc cggttaaacg gcggttaatg acttcaaccg
     3901 caccgatctc aataatatta tgcccaatct gtggcgggcc acctgccata ttcattcctg
     3961 tggtttcagt atccagcact acttggcgga taattttttc ttctgtcata ttcaatttaa
     4021 aattgtaggg gtgaaatatt tttatccctt aattctgcat ttgattaggg gcgaaacata
     4081 tttcgcccct acattgttac ttcgcaatcc gtttatattt cactcggtgc ggttgggtgg
     4141 cggcttcacc gaaggttttc ttcttccact cttcatagtc ggagaagtta ccctcgtaga
     4201 acgtcacttt gccttcatcg ccgtagtcta aaatatgggt ggcgatacgg tctaagaacc
     4261 agcggtcgtg cgaaattacc attgcacagc ccgggaactc taagatcgca ttttccaacg
     4321 cacgcagggt ttctacgtct aagtcgttgg tcggctcgtc cagtaacaac acgttaccgc
     4381 cacgttgtag tagcttcgcc aagtgtaaac gaccacgttc accgcctgaa agctcgccca
     4441 cacgtttttg ctgatctacg cctttgaagt tgaaacgccc cacataagca cggcttggga
     4501 tttcaaagtt accaatcgtg agaatatcct gcccgttcga cacctcttcc cacacggttt
     4561 tcttatcgtc catcgcatca cggaactgat cgaccgatgc cattaccacc gtttcaccaa
     4621 gcacgattga accagaatcc ggctgttctt taccagaaag catacggaac aaggttgatt
     4681 tacccgcacc atttgccccg ataatcccga caatcgcccc cttcggaata gcgaacgaca
     4741 agtcgtcaat caaagtgcga tcgccgtaag atttagtcag gttttgtacc tcgatcactt
     4801 tatcacctaa gcgtggaccc ggtggaataa agagttcgtt agtctcgtta cgtttttgat
     4861 attcgcctga gttaagctct tcaaagcgtg ccatacgagc cttacttttc gcttggcgac
     4921 cttttggatt ttggcgtacc cattccaact ctttctcaat cgatttttga cgagccgatt
     4981 ccgccgcttg ctcttgtgcc aagcgttttt ctttctgctc caaccaagaa gagtagttac
     5041 cttcccaagg aatgccttca ccacggtcaa gctctaagat ccagcccgca acgttgtcta
     5101 agaagtaacg gtcgtgggta attgccacta cggtgccttc gtagtcgtgg aggaaacgct
     5161 ccaaccacgc caccgattcc gcatctaagt ggttggtcgg ctcatctaac aataacatat
     5221 ccggtttttc cagcaacaga cggcaaagtg ccacacggcg gcgttcaccc cctgataaat
     5281 gctcgatttt tgcgtcccaa tccggcagac gtaacgcatc ggcagcacgc tctaactggt
     5341 tttgaaggtt atggccatcg tgggcttgaa taatcgcctc taattccgcc tgttttgccg
     5401 ctaatttgtc gaaatcggca ttctcatcag catacatcgc atagacttca tcaagctggg
     5461 ttaaggcgtt tttcacttcc gcaaccgctt cttccaccgc ttcacgcacg gtttgctgtg
     5521 gggcaagttt cggttcttgt ggaagatagc cgattttaat tcccggttgt ggacgagcct
     5581 cgccctcgaa ctctttatct acgcccgcca taatgcgtaa aagcgttgat ttacccgccc
     5641 cgtttaagcc gagcaccccg attttcgccc ccgggaaaaa gctcagggaa atatctttaa
     5701 gaatgtgacg cttcggcggc acgactttgc cgacacggtg catcgtatat acaaattgag
     5761 ttgacattgg ttgtattcct cacaaaaaaa ttcgccttat tttacttgaa tttacagcca
     5821 aaatataggg tggttttggc ttttggtaaa gtaacctttt ccaatagaga tgttatttga
     5881 ggctgcatag tactatgcat ttctcttacc ttgacaggta agagaaacaa atcctgaagg
     5941 aaaaaaattt taaggaagtt attctatgca atatgtatgt ccaaaaacac tcaaattatt
     6001 caacagcatt gttggttgtt ataagggaga agattaattc tctacctcat caaggcttga
     6061 ttttagattt aatatccatt tctaaagatg atttagatga tattttggag ggtaatactg
     6121 atatgaatat tcatcaatta ttaagcctga tttataaggc tggatttttt gatgtattaa
     6181 acatcacaaa taatctatgt ataaaactca gtcaatttgg tttttatttc caaaatggca
     6241 atttgagcca aaaagatgat gagcttttga gtttatatag agaattctat aaacataacg
     6301 agtttatcac tcatctcaag tcccatagtc tttatggatg tattgagcaa cctacttcgg
     6361 cattttttca ttattgtact aatgaaaact ttagaaatgc gtttaatgaa gagagcctct
     6421 atgattttca aatgtggaat gtgtttagat aggagttttt tatgtcatct caaaatagtt
     6481 tcttaacaaa atattcaaaa agtaattctc atagtcagga ttctcaaaaa ataaatgagt
     6541 cattagaatg gctgaatgaa aaaaattatg gtgaattata t
//
LOCUS       DANMCL010000116         6482 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.118, whole genome shotgun sequence.
ACCESSION   DANMCL010000116 DANMCL010000000
VERSION     DANMCL010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6482
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.118"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..272)
                     /locus_tag="PXF40_002449"
     CDS             complement(<1..272)
                     /locus_tag="PXF40_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011497995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803730.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQACKVMGMSRDTSYRYQQ
                     AVEQSGVDALLNQNRRVPNLKNRVDEATEQAVVKFAFDNPAFGQVRV"
     gene            complement(371..601)
                     /locus_tag="PXF40_002450"
     CDS             complement(371..601)
                     /locus_tag="PXF40_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803731.1"
                     /translation="MSLLKKAQTFISIFNDVRTKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNV"
     gene            complement(671..1222)
                     /locus_tag="PXF40_002451"
     CDS             complement(671..1222)
                     /locus_tag="PXF40_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803732.1"
                     /translation="MCNQKTLSLYGLVKELGIEKTQLFLEQAFSCSRNKDVESFLLNK
                     AIRFETALAAATHLIINEQGDILAYFTLSFKEIEVEVSKSQLKKLTAGLSNDSHLRVL
                     LIGQIGKNEKVIDNPAKLPDILNHIYAQLYKAQRVLGGRVVILECENTPKLLELYKQN
                     KFQILNTIGSENGLKTLFFIPDF"
     gene            complement(1183..1359)
                     /locus_tag="PXF40_002452"
     CDS             complement(1183..1359)
                     /locus_tag="PXF40_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803733.1"
                     /translation="MATSSFDKRFVVKDPKAVKVLIEALQSPIKVVLPKKDLEKEEKE
                     ALCAIKKRLASMGL"
     gene            complement(1559..1813)
                     /locus_tag="PXF40_002453"
     CDS             complement(1559..1813)
                     /locus_tag="PXF40_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803734.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFCNYQQFMPEVEAKESLR
                     KQEPELDDRYNEEEYSEEEYPDENDASDENDNYDETYNVF"
     gene            2052..2306
                     /locus_tag="PXF40_002454"
     CDS             2052..2306
                     /locus_tag="PXF40_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803735.1"
                     /translation="MTNQQLLAIAQEYRERYQDNHPCMLSSGYVRIYQGEAYGWCAEK
                     GEANTECPEALLVSLTGDIFEAVGGDKLKGAKKWQPYKKE"
     gene            2310..2456
                     /locus_tag="PXF40_002455"
     CDS             2310..2456
                     /locus_tag="PXF40_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803736.1"
                     /translation="MDTTQKRVALFIIGLSVVMWLRKHNCCTVIFVLLLAALAFSYTM
                     EHLY"
     gene            2472..2678
                     /locus_tag="PXF40_002456"
     CDS             2472..2678
                     /locus_tag="PXF40_002456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803737.1"
                     /translation="MVKNVVHEEILHNRAELQQAVEKEEFCAKCDNSVVFHLRDNYHE
                     FTLGLDTILQCLHFAEEKGAIRIP"
     gene            2675..3451
                     /locus_tag="PXF40_002457"
     CDS             2675..3451
                     /locus_tag="PXF40_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803738.1"
                     /translation="MNIEYSLNHCQGDGVAFYGRLGTDDLIQLFNHLNPQKRKQKMFA
                     NLLTHIESWETHDDIGFEIIRNRFGYRYSHWNTMELYAKTADQLVFFNDSDARRNWYF
                     PTSKVYKYKGLWDEFIQDLEQYIKGTSREMESVGYQIIEASPYQTETVFKFNTENYLV
                     ELKRKPSEFYSELVDWAFGDMCDFEATIEQICQGQLCYADFEATVTDKKSEIQLGLAR
                     LSGISYSPNDRSFSGYRQELIGEAIASARHNAARFAYLHA"
     gene            3566..3978
                     /locus_tag="PXF40_002458"
                     /pseudo
     CDS             3566..3978
                     /locus_tag="PXF40_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484619.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
     gene            3992..4147
                     /locus_tag="PXF40_002459"
     CDS             3992..4147
                     /locus_tag="PXF40_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803739.1"
                     /translation="METRIVKVIYDDGDYFFTRINADEQAIRNYYAIGSSIGFDDIRK
                     IIAVEIL"
     gene            4227..5201
                     /locus_tag="PXF40_002460"
     CDS             4227..5201
                     /locus_tag="PXF40_002460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1738 domain-containing protein"
                     /protein_id="HDL5803740.1"
                     /translation="MNTQPKFDLYQHITDRIVVALEQGTAPWLKPWSHPECNMALPRN
                     AVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRPDE
                     REKLDEEGNIVYDEEGNPEMERHFFINKHNLFNLDQCENLPVELYDPVSEPKQPKSEP
                     NQYDIFAEIRQIIKGMDLQVEMKPSNRAFYQPGEDKVVMPEMKQFANAQAFHSVLLHE
                     MTHATGANNRLNREGITSGKAKFGNKVYAFEELIAEMGGAFLCAYLGFDTVPQNAAYI
                     ESWIRVLKEDKRAIVRASGKAREACQYMLDALNVAQLADKYDVFEEAA"
     gene            5288..5485
                     /locus_tag="PXF40_002461"
     CDS             5288..5485
                     /locus_tag="PXF40_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803741.1"
                     /translation="MTKSTEIPRGHDNWVITGRDNDGKWHKERFLYYSRREAIQQFRR
                     KHNCVGKHSVIESITPQFGWY"
     gene            5562..5804
                     /locus_tag="PXF40_002462"
     CDS             5562..5804
                     /locus_tag="PXF40_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803742.1"
                     /translation="MFNLNLFKRPIELSTLESWSKFCDDVGKVAFIAIPPMIYSNYDL
                     CIKIGNISALLAITYGFLLSGRTIRQFIEKEKSRWD"
     gene            complement(5964..6221)
                     /locus_tag="PXF40_002463"
     CDS             complement(5964..6221)
                     /locus_tag="PXF40_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803743.1"
                     /translation="MNNKQILSIAQKFRQNHKDSHPFMLERGYVRIYQGKAYGWCAEQ
                     EDANTECPTALIVSLSNEIFEATGGDDISGAEKWEKYNSNF"
BASE COUNT         1951 a         1140 c         1285 g         2106 t
ORIGIN      
        1 actcgtacct gcccaaatgc cggattatcg aatgcaaact tcacaacagc ttgctctgtt
       61 gcctcatcca cacgattttt tagattagga acacgccgat tttgattaag taaggcatcc
      121 accccacttt gctcaactgc ttgttgatag cgataggatg tatctcgact catccccatc
      181 accttacagg cttgagagat attgcccagt tcttctgcta aatttaataa accggtcttg
      241 tgtttaatga gagggttgtt agaataaaac atgagagttt ccttttttgt ttagattgaa
      301 tttggacact catattctaa acgggaaact ctcacttttt agagtgaatt gtcagatcaa
      361 gtctgatctt ctacacatta tcataggttt ctactgcatg aataccacaa ccataatggt
      421 cagcaaagta agtagaacgc ttttgaggct taagggagaa cccattcatc tcagctctca
      481 tttcagcagc atttttcaag gcaacattta aattgtttga agactggcgt tgagcttcat
      541 ttttagttcg cacgtcatta aaaatagaaa taaacgtttg tgctttttta agtagagaca
      601 ttgttctttc tcccatatat gacttcctga caaagctggc gactttcttc taatgaaata
      661 ttagctgtag ttaaaaatca ggaataaaga aaagtgtttt tagaccattc tcacttccaa
      721 tggtattgag aatttgaaat ttattttgtt tatatagttc taataattta ggcgtatttt
      781 cacattctaa tataacgact cgcccaccta aaactcgttg tgctttataa agttgtgcat
      841 agatatgatt tagaatatct ggcaatttgg ctggattgtc aattactttt tcatttttgc
      901 cgatttgacc gataagcaat actcttaaat gtgaatcatt acttaaacca gcagttagct
      961 tttttaattg gcttttgctt acttccacct caatttcttt aaaagagagg gtaaagtaag
     1021 ccaaaatatc gccctgttca ttaatgatta aatgtgttgc tgctgctaat gcggtttcaa
     1081 atctgattgc tttattaagt agaaaacttt caacatcttt atttctactg caagaaaatg
     1141 cttgctccaa aaagagttgt gttttttcaa tacctagttc ttttacaagc ccatagaggc
     1201 taagcgtttt ttgattgcac atagtgcttc tttctcttct ttttctaagt cttttttagg
     1261 taaaactact ttgattgggc tttgtaatgc ctcaattaat accttgacag cttttggatc
     1321 tttgactaca aagcgtttat caaatgatga tgttgccatt atagaactcc ttaaatattt
     1381 aaattaccat ggttactcat ggctgtaata atactgtatt taggccttgt gggtggtttt
     1441 cgattacata gccttatgct tgttagcata gaaatacttt caattaccac aatatataga
     1501 ctatatttgg aaatgcaagc cttttcaatc acggattcct ccggtttcca tatacatact
     1561 agaaaacatt ataagtttca tcgtagttat cgttttcatc gctggcatca ttttcatcag
     1621 gatattcttc ttcgctatat tcctcttcgt tatatctatc atcaagttct ggttcttgtt
     1681 tccttagtga ttctttagct tcaacttcag gcataaattg ctggtaattg cagaaaaaag
     1741 tgccatcgct gcctttttcc caaagtccgg cgtagttgta ttttacatat tcaggatcag
     1801 cgtggcatat catccctaat tgaggggtgg cataagtgag cgacatcgaa atgctactaa
     1861 ggataagcgt gaggagtttt ggtttcacag caaaataggg ttaggtaaat ttacttcagt
     1921 gtatggaaaa acataggaat gttgagcaga aactaaaaat gatttgaata tagtttttgg
     1981 tttctattta taaaaatgtt gccagaatac taagaacgtt ttcaggttta ttatgttatt
     2041 ggagacttta tatgactaat cagcaattac tagctattgc tcaagagtat cgtgagcgtt
     2101 atcaagataa ccatccctgt atgttgagta gcggctatgt tcgtatttac caaggtgagg
     2161 cttatggttg gtgtgctgaa aaaggagagg caaatacaga atgccctgag gccttattgg
     2221 tgagtttaac cggcgatatt tttgaagcag tcggcggaga taagctgaaa ggtgccaaaa
     2281 aatggcagcc ttacaagaaa gaatgacaga tggatacgac acaaaaacgt gtggctttat
     2341 tcatcattgg attatctgtt gtgatgtggc taagaaagca taactgctgt acagtgatat
     2401 ttgtattgtt gttggcagcg ttagcattta gctacacgat ggaacattta tattagctgg
     2461 ggaactgaat tatggtaaag aatgtggttc atgaagagat attacataac cgtgcagaat
     2521 tacagcaagc ggttgaaaaa gaagaatttt gtgcaaaatg tgataactca gtagtattcc
     2581 atttacgtga taattatcac gaatttacgc ttgggttaga tactatattg cagtgtctgc
     2641 attttgctga agagaaggga gctatccgga taccttgaat attgagtatt cactcaatca
     2701 ttgccaagga gatggagtcg cattttatgg tcgacttggt acagatgatc taatccagct
     2761 tttcaatcat ctcaatccac agaaacgtaa acagaaaatg tttgctaatt tgctaacgca
     2821 cattgagtct tgggaaaccc acgatgatat tggttttgaa attatacgaa atcgctttgg
     2881 gtatcgttac tcgcattgga atacgatgga gctttatgct aaaactgcag atcagttagt
     2941 gtttttcaat gatagtgatg ctcgaagaaa ctggtatttt ccgacttcaa aagtgtataa
     3001 atacaaaggc ttgtgggatg agtttattca ggatttagaa cagtatatta agggtacttc
     3061 ccgtgaaatg gaatcggtcg gttatcaaat tattgaagcc tcgccgtatc aaacggaaac
     3121 cgttttcaaa tttaatacgg aaaactatct agtagaactg aaacgtaaac cttctgagtt
     3181 ttattcagag cttgttgatt gggcatttgg tgatatgtgt gattttgaag caactataga
     3241 gcagatttgt caagggcaac tctgttatgc tgattttgaa gcaactgtta ccgataagaa
     3301 aagtgaaatt cagttaggtc ttgctcgctt gagtggaata agttactcgc cgaatgaccg
     3361 ttcgtttagt ggttatcgac aagagcttat tggtgaggcg attgcctctg ctcgccataa
     3421 tgcagcacgt tttgcctact tgcacgccta atttgcagat ttgtacttca atttgaccgc
     3481 ttgtagtggt taattttcac cccgtgggga aatattttcc ctattgggca agatgtttct
     3541 ccacttttta atttggagaa atgtgatgaa aaatgaacac aatttagagc aacttaaata
     3601 tatttgggat aaccgcaacc ttgaaaataa agcctatcaa tacctgtttc acatttgcat
     3661 tgagccgatg aaaaaaggag attggaatcg ttatacgatt tggcttaatt ttcacggcaa
     3721 cttaatcaac gtgtcagacg ttgtatatcg agttgtggaa tctcaaaagc tcaaggatga
     3781 catcaaaatg tggtatgaca ataataccat tgtcgtccga taaaagttga aacaacaggc
     3841 ttcatctcat atttactgca ccagttctat caggggatag cctatatttt actggaacag
     3901 ggaatgatta ctgaaactga agcagccgag aaaagttata acttcagagc tgcaaattgt
     3961 tttcaacgtt tgctttaatg gaggtgagat aatggaaact cgcattgtta aagttattta
     4021 cgatgatggt gattatttct ttacccgaat caatgctgat gaacaggcta tccgtaatta
     4081 ctacgccata ggcagttcaa taggttttga tgatataaga aaaattatcg ctgttgaaat
     4141 tttataaacc acccataggg gaaactattt ccccataggg tgatagcgtt tccccatttt
     4201 tctacccgaa ctttggagaa acacttatga acactcaacc taaatttgat ttataccaac
     4261 acatcactga ccgaattgtt gtagcactgg aacaaggtac agccccgtgg ttaaaaccgt
     4321 ggagccatcc ggaatgcaat atggcattac ctcgcaatgc ggtatctaac cgcttgtatt
     4381 ccggtatcaa tacactctta ctctggattg ctactgctga acatggttac aaacagtgca
     4441 agtggattac agcaaaaaaa gccaatgaac tcggcggata tatccgtaaa ggggaaaaag
     4501 ctactgtggt gatgaactac cgtcctgatg agagagagaa actcgatgag gaagggaata
     4561 ttgtgtatga cgaggaagga aatccggaaa tggaacgaca ctttttcatt aataagcaca
     4621 atctgttcaa tctggaccag tgtgaaaatt taccggtgga actgtacgat cctgtatcag
     4681 aaccgaaaca acctaaatct gagccaaacc aatacgatat ttttgctgag attcggcaga
     4741 ttatcaaagg aatggatttg caggtggaaa tgaagcctag caatcgggca ttttatcaac
     4801 caggtgaaga taaggtcgta atgccggaga tgaagcagtt tgcaaatgct caagcgtttc
     4861 atagtgtatt gttacacgaa atgactcacg caacgggggc aaataatcgg cttaatcggg
     4921 aaggtattac ttccggaaag gctaaatttg gaaacaaagt ctatgctttt gaggagttga
     4981 ttgctgaaat gggcggtgca tttttatgtg cctaccttgg ttttgatact gtgcctcaaa
     5041 atgcggcgta tattgaaagt tggattcgag tattgaaaga agataaacgg gcgattgtcc
     5101 gtgcttccgg aaaagctcgt gaagcctgcc aatacatgtt agacgcatta aacgtcgcac
     5161 agttggctga caaatacgat gtatttgaag aagctgctta acaaatttgc cgaaaggcat
     5221 atctcaaggg gagacctatc cctttgggca tagtgtttcc ctatttttta ttaaatggag
     5281 aaaagctatg acaaaatcaa ctgaaatacc tcgtggacat gataactggg ttattacagg
     5341 cagagacaat gatgggaaat ggcataaaga acgttttctt tattattctc gccgtgaagc
     5401 catccaacag tttcgtcgaa aacacaactg cgtaggtaaa catagtgtta ttgaatcaat
     5461 aacacctcaa tttggctggt attaaccggc tttcccgtgg ggagatactc tcccttcgga
     5521 gcattgtgtc tcccttttta ttcacttaac tagaggacac aatgttcaat ctaaacttat
     5581 ttaaacgccc tattgagctt tcaacgcttg aatcttggtc taaattctgt gatgatgtcg
     5641 gtaaagttgc atttattgcg atacctccga tgatttatag taattatgat ctatgtatca
     5701 aaataggaaa cataagtgct ttattggcaa ttacctatgg attcttatta tcaggcagga
     5761 ctatccgtca atttattgag aaggagaaat caagatggga ttaacaatcg gcttatggat
     5821 cattgctttt ataggctttg cactggtttt ttgggcaaat agcttactca aagagcaaga
     5881 tgaacgcctt aaacagctaa aaaaatagct caactttaca ctcaatacgg cacatttggt
     5941 gccgtatttc attcttatcc taattaaaaa ttagaattat atttttccca tttttcagcc
     6001 ccacttatat catcacctcc agttgcctca aaaatttcat tagataagct gacaattaag
     6061 gcggtagggc attccgtgtt tgcatcttct tgctctgcac accagccata ggcttttccc
     6121 tgataaatac gaacataacc acgctctagc ataaaagggt gagaatcctt gtgattttga
     6181 cgaaattttt gagcaataga caaaatttgt ttattgttca taattatttt tcttattgct
     6241 tatatgctga aaattgatga ttgaatttat tatatctaat tataatattc aatcctgttg
     6301 ctatactgtc taaatcgact atgtgttcat ccttttggtt cataaatgta catttctcta
     6361 taataactaa aatgtttttg gtctctgaat tgtttattat ttcttttgct ggcattagct
     6421 ccataaagtg agataacttc attcttattg ttctgaagta ccaatactta gtattgcaat
     6481 at
//
LOCUS       DANMCL010000117         6479 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.119, whole genome shotgun sequence.
ACCESSION   DANMCL010000117 DANMCL010000000
VERSION     DANMCL010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6479
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.119"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..707)
                     /locus_tag="PXF40_002464"
     CDS             complement(<1..707)
                     /locus_tag="PXF40_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005712160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5803744.1"
                     /translation="MSIYRRKANGPWWVDITTPNGKRIKRSTRTLVKREAQQYHDKLK
                     QEMWAEDKLEEKRKYIFEDALLHYVRAAEELKDKATKKRHAEYWLSKFAGRELSSLTA
                     QEIILNIPKKNANTKKPLSHSTQNKYVKSLSRVLNIAHKLGMLDAVPHIPKKKEPPIR
                     VRWITKEQAKQLIDKLSSDWMKSICKFALMTGARRTEILTMTWDKIDLVRKVAIVTND
                     VAKSGKARSLLLNQEAI"
     gene            complement(611..934)
                     /locus_tag="PXF40_002465"
     CDS             complement(611..934)
                     /locus_tag="PXF40_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005822951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803745.1"
                     /translation="MEHLTINQVAKELNCHPNTVRQHLADWGFFKMVGSEVWRINRED
                     LERAKKRAGIDPIRKRSDNDRGLSLSVEENEKCRSTDEKQTVRGGLISQPQTARELRE
                     ALARL"
     gene            complement(1015..1182)
                     /locus_tag="PXF40_002466"
     CDS             complement(1015..1182)
                     /locus_tag="PXF40_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HDL5803746.1"
                     /translation="MQFTYGSICSGIEATSIAWHGLGKPLWFSEIEPFPCAVLAHRFP
                     NVPNGNGMAVP"
     gene            complement(1190..1564)
                     /locus_tag="PXF40_002467"
     CDS             complement(1190..1564)
                     /locus_tag="PXF40_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803747.1"
                     /translation="MHIEDKIAWWLANGETGVSSKTMAFYLGYGIRPKIEGYPHDVSD
                     FRRCFLLLETVPFLRNRIEKMAELGKVWAALAKEWHTLEALYNEEECQIRCPKTYAKL
                     REILEANEENVVRIGNLSISIG"
     gene            1714..1941
                     /locus_tag="PXF40_002468"
                     /pseudo
     CDS             1714..1941
                     /locus_tag="PXF40_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005609911.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit family protein"
     gene            1966..2361
                     /locus_tag="PXF40_002469"
     CDS             1966..2361
                     /locus_tag="PXF40_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803748.1"
                     /translation="MKIHTQIRKEILSLLEAKLTDIEHFYNGQPNFIDIDEQQLAISV
                     YLDEINRQELTLCDEQWTAQLNITIYLKSVDEAEDELDEWAEKIREVVETYSAFEHLE
                     GISLSQYQYEQDQNQRTWHSATLIFDVEY"
     gene            2393..3034
                     /locus_tag="PXF40_002470"
     CDS             2393..3034
                     /locus_tag="PXF40_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803749.1"
                     /translation="MAKTTKVQGTKFRIGIGREAQKAITAITLATATLTIATSGYKKG
                     DAIEITGCGQLDGIYPVLSVTGDQVKLCEEVNWTGKDLPANYTKAKAALVQYSDQFCA
                     VKNIEKSDDTLSTEDVTTVCSEGTETEPGEIEFGSIKLSFFHKPSTEMQTRLRKLFYD
                     KSTFAYKLELPDNHGTTYGEGFIEAGNGFSGEVKGKYEGSVSIKPSKRDYLLV"
     gene            3117..3518
                     /locus_tag="PXF40_002471"
     CDS             3117..3518
                     /locus_tag="PXF40_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803750.1"
                     /translation="MTLREKLLANKPKLQSIEINGETYYLREATVGDMNKQIFETRSW
                     LIQQAEQENVELPAEDDETFDEALNRFGEKYRLAQSVAYRLCDENGALLFNPLNIDDL
                     NAIAELDSKVIIDFNQAVSAPKDSASEESSK"
     gene            3563..3793
                     /locus_tag="PXF40_002472"
     CDS             3563..3793
                     /locus_tag="PXF40_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HDL5803751.1"
                     /translation="MPERHFAEYQLFYQEQPFGLWREDYRAAQLAHLTAMINRDPKGK
                     APELSEFMPFFNRADEVEANEDDGVADYLAKR"
     gene            3861..4127
                     /locus_tag="PXF40_002473"
     CDS             3861..4127
                     /locus_tag="PXF40_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelB/DinJ family
                     antitoxin"
                     /protein_id="HDL5803752.1"
                     /translation="MATINDAFSFRTNTEIKNTAFDVIKNYGMTPSQVFNMFLTEIAK
                     TKTIPLSLNYQPNLETKLAMQEAKSGKNEVYASLEAFHKAMLAE"
     gene            4131..4400
                     /locus_tag="PXF40_002474"
     CDS             4131..4400
                     /locus_tag="PXF40_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin, RelE/StbE family"
                     /protein_id="HDL5803753.1"
                     /translation="MLQISPTNAYKRDFKKIAAELVGSSEYVEVMYCLINQLPLAEKY
                     RDHPLQGEWQGFRDCHIKPDLVLIYAVEDNLLRLVRLGSHAELFG"
     gene            4475..4738
                     /locus_tag="PXF40_002475"
     CDS             4475..4738
                     /locus_tag="PXF40_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803754.1"
                     /translation="MKNVLLFIVHFFLIAMLSIIPILIILGAIERDPYYTAWIFLSVF
                     LGIGALLYFATIVSKLINKGKTQTLEEKRYAEYWNNVKVNIPK"
     gene            4798..5508
                     /locus_tag="PXF40_002476"
     CDS             4798..5508
                     /locus_tag="PXF40_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HDL5803755.1"
                     /translation="MSGLGKLTVTLELENAKFQSAMTKSDYEAQKFAKNFIQNMDRAR
                     NHAKEFADRSTQYLKNIEQAAKNLNKNSEFSFLSTIGGHYQSMSSGILSAAKAYTDIQ
                     NKMKLVSGSSAEAAKRLTDVFDIATKTSQSTEAVSGVYQTFAQNAQSLGLAQKDVAEL
                     TKTVSQAVAASGASSSAASNALTQFGQSLLMGKMKAQEFNSLITQTPTIIQAMAKGLG
                     MTMAEFKAAVYRAKSLLG"
     gene            5486..5776
                     /locus_tag="PXF40_002477"
                     /pseudo
     CDS             5486..5776
                     /locus_tag="PXF40_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484718.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
     gene            5766..>6479
                     /locus_tag="PXF40_002478"
     CDS             5766..>6479
                     /locus_tag="PXF40_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HDL5803756.1"
                     /translation="MKFSKYQLLVNKICFICGKKDCPQMKKSKDYKDFLDALEKGDVD
                     KADKIYNTKFSQFSKSFGHEMEKNLEKNRIPPIYQGVPFDSFDLYQHYSYGNGEALNL
                     SSVGLSNKIRPLVNKDKAFGKSNGSIESRFISQYKNEGRTSFSNAYDFTKEASGIADP
                     LWALGTATISGELKDIQIFPGGIARGNIHYSIRDRFTDPFDTFNFTKGEWNPNGTPYI
                     IQDSWIKSVRFSIDKKIKIT"
BASE COUNT         2064 a         1277 c         1250 g         1888 t
ORIGIN      
        1 ttaattgcct cttgattcag taatagcgat cgtgccttac ctgatttagc gacatcatta
       61 gtcacgattg ctacctttct tacaagatct atcttatccc aagtcattgt caaaatttct
      121 gtccgtctgg ctccagtcat caaagcaaac ttacagatag atttcatcca gtctgaactt
      181 aatttatcta ttagctgttt tgcttgttct ttggtgatcc agcgtacacg aattggcggc
      241 tctttctttt tcggtatgtg tgggactgca tccaacatac caagtttatg agcgatattt
      301 aatactctcg ataaagattt cacatactta ttttgcgtac tatgagatag aggctttttc
      361 gtatttgcat tctttttcgg gatatttagg ataatctcct gagctgttaa agagctgagt
      421 tcacgaccgg caaatttgga taaccagtat tcagcatgtc gcttttttgt ggctttatct
      481 tttaattctt cggccgcacg aacgtaatgg agcaaagcat cttcaaagat atattttctc
      541 ttttcctcga gtttatcctc tgcccacatt tcttgcttga gtttatcgtg atactgctga
      601 gcttcacgtt ttacaagcgt gcgagtgctt ctcttaattc tcttgccgtt tggggttgtg
      661 atatcaaccc accacggacc gtttgctttt cgtctgtaga tcgacatttt tcattctcct
      721 cgaccgacag agataaccct cggtcattat cagatcgttt tcttattggg tcaataccgg
      781 ctctcttttt tgctctttcc aaatcttctc ggttgatccg ccaaacttcc gagcctacca
      841 ttttaaaaaa tccccaatcc gccaaatgtt ggcggactgt atttggatgg caatttaatt
      901 cttttgccac ttgattaata gtaagatgtt ccattcatta ctttctccaa aataaatccc
      961 tctaaacgag ggattgtact aaataatcgt taagtctttg ccttatccac tgcatcaagg
     1021 cacagccata ccgtttccat ttggcacatt ggggaaacgg tgagctaata ccgcacaggg
     1081 gaatggctca atttcagaga accacaaagg cttacctaaa ccgtgccacg ctatacttgt
     1141 agcttcgata ccgctacaaa ttgagccgta ggtgaattgc attttttacc tatcctatcg
     1201 aaatactcaa attcccaata cggacaacat tttcttcgtt ggcttctagg atttctctca
     1261 acttagcata ggttttgggg catcttattt gacattcctc ttcgttgtag agagcctcta
     1321 atgtgtgcca ttcttttgca agtgcagccc aaactttccc aagttcagcc attttttcaa
     1381 tcctatttcg caaaaaaggg actgtctcca acaacagaaa gcaacgcctg aaatccgata
     1441 catcgtgtgg gtagccttct atttttggtc ttattccgta accaaggtaa aaagccattg
     1501 ttttactgct tacccctgtc tctccattgg caagccacca agcgattttg tcttctatgt
     1561 gcatttttcc tccaaaaatt aaccgcttgc ggaacaagtt ctacaagcgg ttgtcaagtg
     1621 ttcatttgtt caatgaacag ttcattgtga ataacaaaac cgcttgaatt acaagcggtc
     1681 tattttgttg cgtaaattta ctgttagcgt tgagccataa ccgactacga ccgctggccc
     1741 gaagatattg acggcgaggg ggacggcttc tcgcttgcct ccaaacggac gaccactttt
     1801 atgtcagccg gaatgacttt agtggagagt tcgcctggta aagatattgt cgatctcaaa
     1861 catatcccga aaagtagcca cgaagcccca ccgactaccg gtattttaag cctctacaat
     1921 cgaggcgacc gcagacgctt tagcgaaaca gttgataggt aagctatgaa aatccatacc
     1981 caaatccgaa aagaaatcct ttcattatta gaggcaaaat taacggacat cgagcatttt
     2041 tataacgggc aaccgaattt cattgatatt gacgaacagc aacttgccat ctctgtttat
     2101 cttgatgaga ttaaccgtca ggagcttacc ttatgcgatg aacagtggac agctcaactt
     2161 aacatcacga tttatctaaa atcagttgat gaggcagaag atgaattaga tgagtgggcc
     2221 gaaaaaatcc gtgaagtggt tgaaacatat tctgcgtttg aacatttaga gggcatcagc
     2281 ctttctcaat atcaatacga acaagatcaa aatcaaagaa cttggcactc agccacattg
     2341 atttttgatg ttgaatacta acaagcaaat aatccttata ggagaatcta caatggcaaa
     2401 aacaacaaaa gtccaaggca caaaatttag aattggcatt ggacgtgaag cccaaaaggc
     2461 aattacggct atcactttag ctacagcaac gcttactatt gccacatcag gctataaaaa
     2521 aggcgatgca atcgaaatta ccggttgtgg tcagttagac ggcatttatc ctgtattatc
     2581 tgtaacaggc gatcaagtca aattgtgcga agaagtaaac tggacgggta aagatttacc
     2641 ggctaattac accaaagcca aagcagcttt agtacaatac tcagaccaat tctgtgcggt
     2701 aaaaaacatt gaaaaatctg atgatacgtt aagtaccgaa gatgttacaa cggtctgctc
     2761 ggaaggtaca gaaaccgaac ccggagaaat tgaatttggc tcaattaaac tgagcttttt
     2821 tcacaagcca agtacggaaa tgcaaactcg cttacgcaaa ttgttttatg acaaatccac
     2881 ctttgcgtac aaattagaat tacctgataa ccacggcaca acctatggcg aaggtttcat
     2941 tgaggcgggt aacggcttta gtggcgaagt taaaggcaaa tatgaaggct cggtatcaat
     3001 taaaccaagc aaacgtgatt atttgctagt gtaattacaa aatattgctc caaatcgacc
     3061 gcttgtaata ttgcaagcgg tcttttttat cctaaatttt acaaaaggaa tcgacaatga
     3121 cactccgtga aaaactcctc gccaacaaac caaaattaca atctatcgaa atcaacggtg
     3181 agacctacta cctgcgtgaa gccactgttg gcgatatgaa taagcagatt tttgaaaccc
     3241 gaagctggct cattcaacaa gctgaacaag aaaatgttga attaccggca gaagatgatg
     3301 aaacctttga cgaagctctc aaccgttttg gcgaaaaata ccgccttgct caatcggttg
     3361 cctaccgttt atgtgacgaa aacggtgcat tactgtttaa cccacttaac attgacgatc
     3421 tcaatgcgat tgccgaatta gacagtaaag tgattatcga ctttaaccaa gccgtgtccg
     3481 ccccaaaaga ctcagcgagc gaagaaagtt ccaaataacc ctttcgctcg cactgggtaa
     3541 aacccttgaa gaaatcgaac aaatgcctga acgccacttt gccgaatatc agctttttta
     3601 tcaagagcaa ccttttgggc tttggcgtga ggactatcgt gctgctcaac ttgcccactt
     3661 aaccgcaatg atcaaccgtg acccaaaagg caaagcccct gaactctcgg aatttatgcc
     3721 gttttttaat cgggctgatg aagtagaagc aaatgaagat gatggcgttg cggattattt
     3781 ggcgaaaagg taaatctctt gtatttcatt gtaattctgt ctataattgg tgtaatacat
     3841 agaaatacag gagagataaa atggcgacta tcaatgatgc tttcagtttt agaacaaata
     3901 ccgaaataaa aaataccgca tttgatgtaa ttaaaaacta tggaatgaca ccctctcagg
     3961 tgtttaatat gtttttaacc gagattgcaa aaacgaaaac tattccgtta agtttgaatt
     4021 atcaacccaa tcttgaaaca aaattggcaa tgcaagaagc aaaatcaggt aaaaatgaag
     4081 tttatgcctc acttgaagca tttcataaag caatgttagc ggagtaaata atgctacaaa
     4141 tttcgccgac aaacgcatat aaaagagact ttaaaaagat tgcagccgaa ttagtcggta
     4201 gttcggaata tgtggaagta atgtattgcc taataaacca attaccattg gcggaaaaat
     4261 atagagatca cccactacaa ggtgaatggc aaggctttag agattgccat attaagcctg
     4321 atttagtgtt gatttacgct gttgaagata atctgctccg ccttgttcgt ttaggatcgc
     4381 acgctgaatt atttggataa tttctgtaaa aactaaccgc ttgcgatttt gtgctgtggg
     4441 cggtatagtt ggaatattaa caaaggaggg aaaaatgaaa aatgtacttc tatttatcgt
     4501 acactttttc ttaatcgcaa tgctctcaat tatcccaata ttaattattc ttggagcaat
     4561 cgaaagagat ccttactata ctgcgtggat tttccttagc gtatttttag gcattggagc
     4621 attgttatat tttgcaacca ttgtttctaa gttaattaac aagggaaaaa cacaaacatt
     4681 agaagaaaaa cgatatgcag aatattggaa taatgtaaaa gtcaatattc ccaaatagtc
     4741 taactgataa atgaccaaaa gctcgcttta tgcgggcttt tttattggag aaaaacaatg
     4801 agtggcttag gaaaattaac cgttacctta gagcttgaaa atgcaaaatt tcagtccgca
     4861 atgacgaaat ctgattatga ggcacaaaaa tttgccaaga actttatcca aaatatggat
     4921 agagctagaa atcacgccaa agaatttgcc gatcgctcaa cccaatattt aaaaaacatt
     4981 gagcaagcgg caaagaacct caataaaaat tctgaatttt catttttatc gactattggt
     5041 ggacattatc aatcaatgtc tagtggcata ttgagtgcgg caaaagccta tactgatatt
     5101 caaaataaaa tgaaattagt aagcggtagt tcagcagagg cagctaaacg attaactgat
     5161 gtgtttgata ttgcgactaa aacaagccaa agtacagagg ctgtttcagg tgtctatcaa
     5221 acatttgctc aaaatgccca atctctcgga ctggctcaaa aagatgtagc agaattaact
     5281 aaaacggtct ctcaagccgt tgctgcaagc ggcgcaagca gttctgcagc aagtaatgcc
     5341 ctaacccaat ttggtcaatc acttttaatg ggcaaaatga aagcccaaga atttaactcg
     5401 ctcattactc aaaccccaac cattattcaa gcaatggcaa aaggtttggg aatgacaatg
     5461 gcagaattta aagcagcggt ataccgggca aaatctttac ttggataaca ttcaagggca
     5521 aggttttgag agagtggata caccccaaat cggcgatgtg attttaatac aggtcggttc
     5581 tgatgtgccg aatcacgcag cgatttatat tggtgaacaa atggtaatcc accatagccc
     5641 gaaccgatta tctaagcgtg atttatatga cggttattgg ttacgccata cccacagtat
     5701 ttggcggcat aaactggcgg atagattgga ttttgacggc atatttaatg atataggaga
     5761 acaatatgaa atttagtaaa tatcaattat tagttaataa gatctgcttt atttgtggta
     5821 aaaaagattg tccacaaatg aaaaagagta aagactacaa agactttttg gatgctttag
     5881 aaaaagggga tgttgataaa gcagataaaa tatacaatac gaagttttca cagttttcta
     5941 aatcttttgg tcatgaaatg gaaaagaatt tagagaaaaa tcgtatacct cctatttatc
     6001 agggagttcc atttgattct tttgacttat atcagcatta ttcttatggt aatggagagg
     6061 cattaaatct ttcatccgtt ggattaagta ataaaattcg tcctctagtg aataaagata
     6121 aagcatttgg taaatccaat ggaagtatag aaagccgatt tatttcgcaa tataaaaatg
     6181 aaggacgcac atctttctcc aatgcttatg attttacaaa agaagcatcg ggtattgcag
     6241 atccgttatg ggcgttagga acagctacca ttagtggaga attgaaagat atacaaattt
     6301 ttcccggtgg tattgctagg ggaaatatcc attatagtat cagggacaga ttcactgacc
     6361 catttgatac attcaatttt actaaaggag aatggaaccc aaatggaaca ccttatatta
     6421 ttcaagatag ctggataaaa tcggtacgat tttcgataga caagaagata aaaataaca
//
LOCUS       DANMCL010000118         6403 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.120, whole genome shotgun sequence.
ACCESSION   DANMCL010000118 DANMCL010000000
VERSION     DANMCL010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 6403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6403
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.120"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            46..297
                     /locus_tag="PXF40_002479"
     CDS             46..297
                     /locus_tag="PXF40_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803757.1"
                     /translation="MKIVVFQRKALKQLRKIPTGAEIRRKCDDLAYFPYCANIKALTN
                     HQYDYRFRVGNYRIFFNIEGETMNIVSIEEVKKRDERTY"
     gene            281..628
                     /locus_tag="PXF40_002480"
     CDS             281..628
                     /locus_tag="PXF40_002480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HDL5803758.1"
                     /translation="MKELTNIQYLNNEEGKPAFAVLPIATLEWLKQKANIKTAIETGI
                     PSAVAGIALDNNYSALRAWREYLGLTQEEVAQRLGISQSAYSQHENAKNLRKTTRIKI
                     AYALGLNEEQLDF"
     gene            complement(669..1829)
                     /gene="trmG/rlmN"
                     /locus_tag="PXF40_002481"
     CDS             complement(669..1829)
                     /gene="trmG/rlmN"
                     /locus_tag="PXF40_002481"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HDL5803759.1"
                     /translation="MSELITNAGCGSAEQPKEKINLLNLNRQEMRELFAEMGEKPFRA
                     DQLMKWIYHFGEENFDNMSNINKVLREKLKRIAEIKAPEVAVEQRSADGTIKWAMQVG
                     DQQIETVYIPEDDRATLCVSSQVGCALACTFCSTAQQGFNRNLSVAEIIGQVWRASKI
                     IGNFGVTGVRPITNVVMMGMGEPLLNMNNVIPAMEIMLDDFAYGLSKRRVTLSTSGVV
                     PALDKMREQIDVALAISLHAPNDELRDELVPINKKYNIKMLMDSVNKYREVSNANHGK
                     VTIEYVMLDHVNDSTNHAHQLAEVLKNTPCKINLIPWNPFPEAPYGKSSNSRVDRFQK
                     TLMEYGFTVTVRKTRGDDIDAACGQLAGDVIDRTKRTLEKRKFGQGIAVKTH"
     gene            2089..2985
                     /locus_tag="PXF40_002482"
     CDS             2089..2985
                     /locus_tag="PXF40_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HDL5803760.1"
                     /translation="MKLSTIKKALVLTFGLSAAMAMAEPFKVVTTFTVIQDIAQNVAG
                     DKATVESITKPGAEIHDYQPTPKDIVKAQKADLVLWNGMNLERWFERFFENVKGKPAV
                     VVTEGITPMPITEGEYKNLPNPHAWMSTDNALIYIENIRAALVKYDPQNADTYNANAK
                     AYAEKVKGIAEPLRQRLAFIPEQQRWLVTSEGAFSYLAKDYNLKELYLWAINAEEQGS
                     PKQVKKVIDGVKANKIPVVFSESTVSDKPAKQVAKETGALYGGVIYVDSLSEKDGPVP
                     TYLDLLKVTIGTIVEGFERSKK"
     gene            2998..3741
                     /locus_tag="PXF40_002483"
     CDS             2998..3741
                     /locus_tag="PXF40_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HDL5803761.1"
                     /translation="MTTVSASISVENLSVRYNNGHIALQDVSFHLENGTICALIGVNG
                     GGKSTLFKSLMGLVKPLTGSVKLSQLPIAKALKQNLVSYVPQSEEVDWQFPVSVYDVV
                     MMGRYGYMNFLRRPSQTDKLKVEQAMQRLDVLHLKDRQIGELSGGQKKRVFLARALAQ
                     ESKIILLDEPFTGVDVKTENAIVELLKQLKNEGHLILVSTHNLASVPSFCDQVLMVNR
                     TLLAKGKTEEIFNNQNLERVFGGLLHYQK"
     gene            complement(3798..4607)
                     /locus_tag="PXF40_002484"
     CDS             complement(3798..4607)
                     /locus_tag="PXF40_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5803762.1"
                     /translation="MLNWILEPLQFEFMQIALITAILVAGVSAVLSCYLVLKGWSLMG
                     DAISHAVLPGVVISSLAGLPLSIGAFFSGLGCALSVGYLKENSRLKEDTVMGIVFSGM
                     FAFGILLFTAFNTGEHLTHILFGNLLGVTKSDLLQTLLISLFTFVVMVAKRKDFLLYC
                     FDVNQAKVAGLPVRLLHYGLLSLLALTIISAMQVVGVILVVAMLITPGITAYLLTKRF
                     DSMLLIALGVAIFSSVFGTLLSYHIDAATGPTIILVQAAIFFLSFAYSKIH"
     gene            complement(4600..5460)
                     /locus_tag="PXF40_002485"
     CDS             complement(4600..5460)
                     /locus_tag="PXF40_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HDL5803763.1"
                     /translation="MLDLLLEPFTYNYMQKAIFVSMGVGLVCAFLSAFLMLKGWSLIG
                     DALSHAVVPGVAIAYALKLPYAFGAFFSGILAALSILWVKSLTKIKEDAVIGFIFTTF
                     FALGMFIVSLNPTSVDVNSIVMGNILGIADDDLWQVVLIIAISLLGLILFWKDLLLVF
                     FDEHHALSVGLSPLRYKVIFFTLLSACVVVALQTVGAILVIAMVVTPGATAYLLTDRF
                     PRLVLIAMLIGTLTSGIGAYLSYFLDGATGAVIVCLQTLIFLFAFCFAPKYGLITQKR
                     KLHRVEVQNA"
     gene            complement(5534..6319)
                     /locus_tag="PXF40_002486"
     CDS             complement(5534..6319)
                     /locus_tag="PXF40_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HDL5803764.1"
                     /translation="MMKKITILGLGWLGLPLAEALQNKGWRVAGTKRTVGELAIECYP
                     LDLNALAVTSEIEQLLAADALVIALPLSQIRPENYGCGIQTLVSLAIEKGLKHLVFTS
                     STSVLPMKSGVFDENAVVDSANLLVKMENWLLSQPIHCDILRLAGLVGKKRHPVFYLA
                     GKQNLSGAGQPVNLVHLEDCIAAISLLLEQPNGQRIFHLCAEQHPSRKDYYSEMAKRF
                     GLADLHFSEENQPLVRLIKADKICQELGFRYYYPDPYQFKVDI"
BASE COUNT         2079 a         1377 c         1248 g         1699 t
ORIGIN      
        1 aatttcattg aaaaaactta taaaacttat aaaatagagg caaaaatgaa aatagtggta
       61 ttccagcgta aagccttaaa gcaattacga aaaatcccaa ctggtgcaga aattcgccga
      121 aaatgtgatg atttagctta ctttccctac tgtgccaata ttaaggcatt aacaaatcat
      181 caatatgatt atcgctttcg ggtcggaaat taccgtattt ttttcaatat tgaaggcgaa
      241 acgatgaata ttgtgtctat cgaagaggtt aaaaaacgag atgaaagaac ttactaatat
      301 tcaatattta aataatgaag aaggaaaacc tgcctttgcc gtacttccga tagcaacact
      361 tgaatggctt aagcagaaag caaatattaa aaccgcaata gagaccggta ttccatctgc
      421 tgttgctgga attgcattag ataataacta ctcagctctg cgtgcttggc gggaatattt
      481 aggtttaact caagaagagg tggcacaacg cttggggatt tcgcaatcag cttatagcca
      541 acacgaaaat gcaaaaaatc tacgaaaaac gacccgcata aaaattgcct atgcgttggg
      601 tttaaatgaa gagcaattag atttctaata acaaaaaggc aggaacctct gccttttcac
      661 tattcagatt aatgggtttt aaccgcaata ccttgcccga atttacgttt ttcaagggtg
      721 cgtttggtgc ggtcaatcac atcgccagca agctgtccgc aagcggcatc aatatcatca
      781 cctcgtgttt tacgcactgt taccgtgaaa ccgtactcca tcaaggtttt ttggaaacga
      841 tctacccgag agttagagct tttaccataa ggagcttctg ggaacgggtt ccacggaatc
      901 aagttaattt tacacggcgt gttttttaat acttcagcaa gttggtgggc gtggtttgtg
      961 ctgtcattga catgatctaa catcacatat tcaatcgtga ccttgccgtg gttggcgtta
     1021 gaaacttcac ggtatttatt caccgaatcc atcaacattt tgatgttgta ctttttatta
     1081 atcggcacta attcatcacg cagttcatcg ttcggagcgt gaagtgaaat tgccaacgcc
     1141 acatcaattt gctcacgcat tttgtctaat gccggcacca cacccgaagt ggaaagcgtg
     1201 acacgacgtt tagataagcc gtaagcaaaa tcatctaaca tgatttccat tgccggaatc
     1261 acgttattca tattcagcaa tggttcaccc attcccatca tgaccacatt ggtaatcggg
     1321 cgaacaccgg tcacgccaaa attgccgata attttagaag cacgccacac ttgcccgata
     1381 atttccgcca cgcttaagtt acggttaaag ccttgttgag cggttgagca gaaggtacaa
     1441 gccaaggcac agcctacttg tgaagaaaca cacagggttg cacggtcatc ttcaggaata
     1501 tataccgtct cgatttgctg atcgcccact tgcattgccc atttaatcgt accgtctgca
     1561 gaacgttgtt ctaccgccac ttcaggggct ttaatttcgg caatacgctt taatttttca
     1621 cgcaatactt tattgatatt gctcatatta tcgaaatttt cttcgccaaa atggtagatc
     1681 catttcatta gctggtcggc acggaaaggt ttttccccca tttctgcaaa cagttctcgc
     1741 atttcttgac gattaagatt taataaattg attttttctt ttggttgttc agcagaccca
     1801 cagcctgcat tggtaatcag ttctgacata aagttgaaag cctcgttatt acacggatta
     1861 cggcaaaagg ttagggcaaa tgcccttatt ttgcgattgg attttaaagc gtgcaatttt
     1921 actggctctt gagggattag gctagtaatt tttaatcaaa agagttgaat tgcctgagta
     1981 aacttatcaa gaataacctt ataaaaacaa gactatttac atcattccca atgttctata
     2041 gaatagcttt cgataattct cattctcaat aacaaaagga ggctaaaaat gaaactatca
     2101 acaattaaaa aagcattggt attaaccttt ggtttaagtg cagcgatggc aatggcagag
     2161 ccgtttaaag tagttaccac ttttaccgtg attcaagata ttgcacaaaa tgtcgccggc
     2221 gataaagcca ctgtggaatc cattactaaa ccgggtgctg aaattcacga ttatcaacca
     2281 acaccaaaag acattgtaaa agctcaaaag gcagacttag tgttatggaa cggtatgaac
     2341 cttgagcgtt ggtttgaacg tttctttgaa aatgtaaaag gtaaaccggc ggttgtcgtc
     2401 accgaaggca tcaccccaat gccgattacc gaaggtgaat ataaaaatct accaaatccg
     2461 cacgcttgga tgtccaccga taacgcatta atttacattg aaaatattcg tgcggcttta
     2521 gtaaaatatg acccacaaaa cgcagacacc tataatgcca atgcaaaagc ctatgctgaa
     2581 aaagtaaaag gtattgctga gccactccgc caacgtttag cttttattcc tgagcagcaa
     2641 cgttggttag taaccagtga aggggcattt agctatttag cgaaagacta caacttaaaa
     2701 gaactttatt tatgggcaat caatgcggaa gagcaaggtt cgccaaaaca agtgaaaaaa
     2761 gtgattgatg gtgtaaaagc caacaaaatc cctgttgtgt ttagcgaaag taccgtttcc
     2821 gacaaaccgg caaaacaagt ggcgaaagaa accggtgcat tatacggtgg cgtaatttat
     2881 gtggattcac tttcagagaa agatggtccg gttccaacct atttagattt gcttaaagtg
     2941 actatcggca ccattgtcga agggttcgaa cgaagcaaaa aataataaga tttagcaatg
     3001 acaactgttt cagcctccat ttccgtcgaa aatttatcgg tccgttataa taacggacat
     3061 atcgctttgc aagatgtctc gtttcatctg gaaaacggca caatttgtgc attaatcggc
     3121 gtgaatggag gtggaaaatc cactctgttt aaaagtttaa tggggctggt taagccatta
     3181 accggctctg ttaagctgag tcagctcccg attgctaaag ccctcaaaca aaatttggtt
     3241 tcctatgtgc cacaaagtga agaagtggac tggcaatttc cagtttcggt ttacgatgtg
     3301 gtaatgatgg ggcgatacgg ctatatgaat tttctacgcc gcccaagcca aaccgataag
     3361 ctcaaagtag agcaagcaat gcaacgcctt gatgttttac atctcaaaga caggcaaatc
     3421 ggcgaacttt ccggcgggca aaaaaaacgg gtatttttag cccgtgcctt agctcaagaa
     3481 agtaaaatca tcttacttga tgagcctttc accggtgtgg atgttaaaac cgaaaatgcg
     3541 attgttgagc tacttaaaca gcttaaaaat gaggggcatt tgattttagt ttccacccac
     3601 aaccttgcca gcgtaccaag cttttgcgat caggttttga tggtcaatcg cacgctactg
     3661 gcaaaaggta aaacggaaga aatctttaat aatcaaaatt tagaacgggt gttcggcggt
     3721 ttattgcatt atcaaaagta gtgtttcagc aacaaatcac aaacaaatag ggaggcaaat
     3781 gcctccctat ttttgtatca atgaatctta gaatatgcaa aactgaggaa aaaaatggcc
     3841 gcttgcacga gaataatcgt cggccctgtt gcggcatcaa tatggtagct aagcaacgtg
     3901 ccgaataccg atgaaaatat cgcaacgcct aaggcaatca gtaacatact atcaaaccgc
     3961 ttagtcagca ggtaagcagt gatccccggg gtaatcaaca ttgccaccac taaaatcacg
     4021 cccaccactt gcattgcact gataatagtt aaagcaagca aggaaagtaa accataatgc
     4081 aataatctaa ccggtaagcc tgctactttg gcttgattaa catcaaagca atagagcaag
     4141 aagtctttgc gtttcgccac catcaccaca aaggtaaaga ggcttatgag taaagtctga
     4201 agcaaatcgc ttttggttac gcctaataga ttaccaaata aaatatgggt taaatgctca
     4261 ccggtattaa aggcggtaaa cagcaagatc ccaaaggcaa acatacctga aaacacaatc
     4321 cccattaccg tgtcttcttt caagcgacta ttttctttta aatagcccac cgataaggca
     4381 cagcctaatc ctgaaaaaaa cgcccctatt gagagtggta acccggcaag tgaggaaatc
     4441 accacaccgg gcagaacagc gtgcgaaatt gcatcgccca ttaaagacca gcctttcagc
     4501 accagatagc aagataaaac cgcactcacg ccagcaacta aaattgcggt aattaacgca
     4561 atttgcataa attcaaattg caacggctct aaaatccaat taagcatttt gaacctccac
     4621 acggtgcaat ttccgctttt gagtaatcaa gccatattta ggagcaaagc agaatgcgaa
     4681 taagaaaatt aaggtttgta agcacacaat taccgcaccg gttgcaccgt ctaaaaagta
     4741 gcttaaatat gccccaatcc ctgatgtcag cgtgccgata agcattgcga tcagcactaa
     4801 tctagggaaa cggtcggtaa gtaaataagc agttgctccc ggcgtgacga ccatcgcaat
     4861 aaccaaaatt gccccaaccg tttgcagagc cactactaca caggcactta ataaggtaaa
     4921 gaaaatcact ttatagcgta atggcgaaag cccgactgac aatgcgtggt gttcgtcaaa
     4981 aaagacgagt agcaaatcct tccaaaatag gattaaaccc agtaacgaaa tcgcaataat
     5041 cagtaccacc tgccacaagt catcatcagc aatgcctaaa atatttccca ttacaatcga
     5101 attaacatca accgatgttg gattgaggga aacaataaac ataccaagcg caaaaaaagt
     5161 cgtgaaaata aagccgataa ccgcatcttc tttaattttc gtcaggcttt ttacccaaag
     5221 aatcgataat gccgccaaaa tcccggaaaa aaacgcacca aaggcgtagg gcaattttag
     5281 tgcataagcg atggcaacac ctggcactac agcgtgtgat aaggcatcac caatcaaaga
     5341 ccagcctttt aacatcaaaa aggcggaaag aaaagcacaa actaacccca cgcccatact
     5401 gacaaaaatc gctttttgca tatagttgta ggtaaaaggc tctaataaaa gatcaagcat
     5461 aaaatcctaa caagttgttg ataatagttc gcatatacta tcatataaac tccttttctt
     5521 gtatggatta aacttaaata tctactttaa attgataagg atcaggatag taataacgaa
     5581 aaccaagctc ttggcaaatt ttgtctgctt ttatcagcct tacaagcggt tgattttctt
     5641 cagaaaaatg caaatccgct aacccaaaac gttttgccat ttcactataa taatctttac
     5701 ggcttgggtg ctgttcggca cataaatgaa aaatacgctg cccgttcggc tgctccaaca
     5761 gcaatgaaat ggctgcaata cagtcctcta aatgcactaa attgaccggc tgccctgctc
     5821 cactcaagtt ctgttttccc gccaaataaa aaaccgggtg ccgttttttg cccaccaagc
     5881 cagctaaacg caaaatatca caatgaattg gctggctcag caaccaattt tccattttta
     5941 ctaataggtt agcagaatca accactgcat tttcatcaaa aacgcccgat ttcattggca
     6001 aaaccgaagt cgagctggtg aaaaccagat gtttcaagcc cttttctatt gcaagcgaaa
     6061 ctaatgtttg aataccgcaa ccgtaatttt cagggcgaat ttggctaagg ggcaaggcaa
     6121 tcactaacgc atcagcagca agtaattgct cgatttcgct tgtcactgct aacgcattta
     6181 aatctagagg ataacattct atcgctaatt ctccgaccgt tcgcttagta cctgcaacac
     6241 gccagccctt attttgtaat gcttcagcta aaggtagtcc gagccagcca agccctaaaa
     6301 tggtaatttt tttcatcatt tacgtttctc aagattaaaa ttggaatgag gggaaattca
     6361 ggtacaaaaa aagcacctcg tggtgctatc tattttattt cta
//
LOCUS       DANMCL010000119         5769 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.121, whole genome shotgun sequence.
ACCESSION   DANMCL010000119 DANMCL010000000
VERSION     DANMCL010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5769)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5769)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5769
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.121"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            22..834
                     /locus_tag="PXF40_002487"
     CDS             22..834
                     /locus_tag="PXF40_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5803765.1"
                     /translation="MGRPELERAVLSVQNQTYPCKHYVFVDGEKYHQQAADILKNFPS
                     VIVTYLPMNTGADGWVNSSINAIAPFLVKEDIICYLDDDNWFEPTHVESGVHALLEMQ
                     SDYAYSLRNFYDLDGEFLCIDTIESLGEYNCVYQEPLECNYQLGGVKGVLSINLNDCQ
                     HIDTNCYFIRSEIARLISTAWYTGIHNDRNVYKKLQELALKGNCTKKVTVNYTLDTRK
                     YYGSVFNELLEEPFLLSEYDAYQFTNEVIKFHSEESLKAWGGCLIWEQNNGS"
     gene            966..1664
                     /gene="aphA"
                     /locus_tag="PXF40_002488"
     CDS             966..1664
                     /gene="aphA"
                     /locus_tag="PXF40_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid phosphatase AphA"
                     /protein_id="HDL5803766.1"
                     /translation="MTAATMFASLIAFSAQAGGPKVAYTQPGIDMRTHEAQQAPIHWV
                     SIEQIKESIKDLPPMAVSFDIDDTVAATSGCFHYGKQKYSPDDFSYLKNQDFWDEINA
                     GCDKYSLPKQVAINLIKMHQERGDQVYLITGRTAGKNEQVTTIMQKYLGIKNMQPVNF
                     MGGKAHSTKYDKTPAIIEHKVQIHYGDSDDDILAAREAGIRGIRILRAANSNYTPFPQ
                     AGGYGEEVVVNSSY"
     gene            1845..2606
                     /gene="udp"
                     /locus_tag="PXF40_002489"
     CDS             1845..2606
                     /gene="udp"
                     /locus_tag="PXF40_002489"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HDL5803767.1"
                     /translation="MSEVFHLGLTKAMLKGAKIAIVPGDPARSERIAKKMDNPEFLAS
                     TREFTSWLGYLDGEPVVVCSTGIGGPSVSICVEELAQLGVRTFLRIGTTGAIQEHINV
                     GDILITTGAVRLDGASQHFAPMEYPAVANFECTNALYAAAVESGVTPYVGITASSDTF
                     YPGQERYDTFTGKIYRHFQGSLKQWQDLNVMNFEMESATLFTMCSALGLRAGMVAGVI
                     VNRTQQEIPNEATIHDTEHKAVSVVVEAARKLIKG"
     gene            2681..3266
                     /locus_tag="PXF40_002490"
                     /pseudo
     CDS             2681..3266
                     /locus_tag="PXF40_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248263.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3277..3762
                     /locus_tag="PXF40_002491"
     CDS             3277..3762
                     /locus_tag="PXF40_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HDL5803768.1"
                     /translation="MYSLYLKILSECDWCCDPKTLSTYQQEWLLHEGSLTQKLYDVAT
                     NFNVEVVQEKWIAKNSEKTTACNEDVWSREVLLKDGEKNWIFAQTLVPRSTIENIAQN
                     VLELGNQPIGLWLFSQNPTRTKLEWTQTENGLFARRGVYEIRGYSLEIRELFLETFPY
                     L"
     gene            complement(3800..4669)
                     /locus_tag="PXF40_002492"
     CDS             complement(3800..4669)
                     /locus_tag="PXF40_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HDL5803769.1"
                     /translation="MKNINTQAVGWIGLGQMGEPMAKHLLNSGVNVGVYNRDPAKAEK
                     VVEAGGTLYPSVLELVKAYDVIFLMIADYAAVQQVLSDEVLAELNGKVVVNMSTISPS
                     QNQAVEALLAQHGAEFVEAPVSGSSKVAEAGKLLVLAAGKEETVELLKPLFAAFSTTT
                     FYYGEVGKAGGIKLMINSLLGIFIQAYGEALNFADQYGIPKEKVIEMISGSFMNSPIF
                     QAKVPMYQANEFPPAFMMKHMTKDFNLASEEIAKLGKSYPLIEQATKTYNQANDSGLS
                     EVDMAAIYQFLAK"
     gene            4799..5590
                     /locus_tag="PXF40_002493"
     CDS             4799..5590
                     /locus_tag="PXF40_002493"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HDL5803770.1"
                     /translation="MKPTILLYDSGMGGLTIYDEIRKVLPHAHYLYCFDNAFFPYSEK
                     SEAVLIERAVKIVQKIAEKQPLDMVVVACNTASTVVLPALREHFNFPIVGTVPAIKPA
                     AAISETKVIGLLATKGTVARPYVDELIRKYAQDCTVEKIGTTDLVEIVEEKQRSGKVD
                     MNRLQKVVEAWQGKPELDTVILGCTHFPLVKAELQQLLPDVKYFVDPGVGIAKRVLSL
                     LEERKFQQKADFENQAFCTKQSSAFNIKQDVMQNWGFNNLSVIDI"
BASE COUNT         1793 a         1009 c         1197 g         1770 t
ORIGIN      
        1 gtagctgtta tcagttcaac aattggtcgt cctgaattag aaagagctgt tttaagcgta
       61 caaaatcaga cttatccttg taaacattat gtttttgttg atggagagaa atatcaccaa
      121 caagcggctg atattttaaa gaattttcca agtgttattg ttacttatct cccaatgaat
      181 accggggctg atggttgggt aaatagcagc attaatgcaa ttgcaccatt tttagtgaaa
      241 gaagatatta tttgttatct ggatgatgat aattggtttg aacctactca cgttgaatct
      301 ggtgtgcatg ctttattaga aatgcaatct gattatgctt actctttacg taatttttat
      361 gatttagatg gcgagttttt gtgtattgat acgattgaat cgttgggaga atataattgc
      421 gtttatcaag aaccattaga atgtaattat caattaggtg gtgttaaagg tgttttatca
      481 ataaatctga atgattgtca gcatattgat acgaattgct attttattcg tagtgagata
      541 gctcgcctta tcagtacggc ttggtacaca ggtattcata atgatagaaa tgtatataaa
      601 aaattacaag aattggcact aaaaggaaat tgtacaaaga aagttacggt taattatact
      661 cttgatacac gtaaatatta tggatcagta tttaatgaat tattagagga gccattttta
      721 ttaagcgaat atgatgccta tcaatttacg aatgaggtga ttaaatttca ttcagaagaa
      781 agccttaaag cttggggagg ttgcttgatt tgggaacaga acaatggctc ataagcgtta
      841 agcgtaatcg tttgcttgtg atcatattca caaaataagg tttttgtatt agctaagagt
      901 gcctaataag attaaaatag gtatggttaa tcatatggag gtattttata aaatttacat
      961 taaaaatgac ggcagcgaca atgtttgcat ctcttattgc tttttcagca caagcaggcg
     1021 gaccaaaagt agcttatacc cagccgggaa ttgatatgcg aacacatgaa gcacagcaag
     1081 cgccaattca ttgggtatct attgagcaaa ttaaagaaag catcaaagat ttacccccta
     1141 tggcggtaag ttttgatatt gatgatactg ttgctgcaac tagcggttgc ttccactacg
     1201 gaaagcaaaa atattcgcca gacgatttca gctacttaaa aaatcaagat ttttgggacg
     1261 aaattaatgc tggctgtgat aaatattctt tgccaaagca agttgctatt aatttaataa
     1321 aaatgcacca agaacgtggt gatcaagttt atttaattac ggggcgtacc gcaggtaaaa
     1381 atgaacaagt tacaacgatt atgcaaaagt atcttggtat taaaaatatg caaccggtaa
     1441 attttatggg ggggaaagca cattcaacaa aatatgataa aacccctgcg attattgaac
     1501 ataaggtgca aattcactat ggtgacagtg atgatgatat cttagctgcc cgtgaagccg
     1561 gtattcgagg tattcgtata cttcgtgcag caaattctaa ttatacgcca ttccctcagg
     1621 ccggaggata tggtgaagaa gttgttgtca attcaagtta ttaatttctt agtctgaaat
     1681 atggccacca ttgcgtggcc atcatttttt atttatataa tgacgaaacc gtttaccttt
     1741 gatctagttc acaaaatcaa actttgcttg caaaaaattg tcgtaaatta accgcttgct
     1801 aagatagaat ggctcatatc cagttagata aaaaggagat aaaaatgtct gaagtatttc
     1861 atttaggttt aaccaaagcc atgctcaaag gtgcaaaaat tgcaatcgtt ccgggcgatc
     1921 cggctagaag tgaacgtatt gccaaaaaaa tggacaaccc agagttttta gcctcaaccc
     1981 gtgaatttac ctcttggtta ggttatttag atggcgaacc ggtggtggtt tgttcaaccg
     2041 gtattggcgg accgtcggtg tcgatttgtg tggaagagtt agcacagtta ggtgttcgca
     2101 cattcttacg cattggcaca acaggtgcaa ttcaagagca tattaatgta ggcgatattt
     2161 taattaccac cggagcggtg cgtttagatg gtgcgagcca acattttgca ccaatggaat
     2221 atcctgcagt agcgaatttt gaatgtacta atgctcttta tgcagcagca gtggaatcag
     2281 gcgttacacc ttatgtgggg attacagctt catcagacac tttctacccg gggcaagaac
     2341 gttacgacac tttcaccggc aagatctatc gtcatttcca aggttcatta aaacagtggc
     2401 aagatctcaa tgttatgaat tttgaaatgg aatccgccac tctctttacg atgtgttcgg
     2461 cattaggctt gcgagcaggt atggttgctg gtgtaattgt aaaccgcact caacaagaga
     2521 ttccgaatga agcaaccatt cacgacaccg aacataaagc cgtttcggta gtagtggaag
     2581 cggcaagaaa attaattaaa ggctaatctt taaatttaaa agcaaaaaag gtaaattgtc
     2641 tttgttacaa tttacctttt ttctttttag ggagctttct atgaaaaaat ggttgatgtt
     2701 aattacatta attttcggca ttaccgcttg tttttccagt ttagaatttg atgaaagtaa
     2761 acaagaaaaa atcaattcat tcttgattgt tggtaataaa ttatatgtgg tgggtgaact
     2821 gcacgattat gaatttgagc atcagcaagt tgcggaactg aataattttc tcaaaagcct
     2881 aattgctaat aaaatcaaat ctgttgaggc aaacttcgag gttaaggaat ccaaaaaagt
     2941 ggaaggtagt tatagaatta ttttagatgg gaaatcactt acagaaagtg aaagaagtac
     3001 ggtgatggtt taattcagct caaaatccat ctattactta tcaggcggaa gggaacttgg
     3061 tgaaattagc caatagagaa gagcttttgc aaaaattccg atttaaacaa gcgcttgagg
     3121 cgaatgtgcg ttattacaaa atgaaaagtg gtcttcaaaa tacggctgaa ggagcgttaa
     3181 gtattgtaat gttgcctgtt gctgtagtag ctgttttacc attctatatg ttttgggttg
     3241 gtgcttgtgc cacttacgga tgttaaataa ctttttatgt attctctata cctgaaaatt
     3301 ttatcggaat gcgattggtg ttgtgatcca aaaacacttt ctacctacca gcaagaatgg
     3361 cttctgcacg aagggtcact tacccaaaaa ttgtatgatg tcgcaaccaa tttcaacgtg
     3421 gaagtagtac aagaaaagtg gattgcaaaa aacagtgaaa aaacgaccgc ttgtaatgaa
     3481 gatgtttggt cgcgagaagt gttactgaaa gatggtgaaa aaaattggat ttttgcccaa
     3541 actcttgtgc caagatcaac aatcgaaaat atcgctcaaa acgtgttgga attgggcaat
     3601 cagccgattg gtttatggct attttctcaa aatcctactc gcaccaaatt agaatggaca
     3661 caaacagaga acggtttatt cgctcggcgt ggggtgtatg aaattagagg gtattctctg
     3721 gaaattcgag agcttttttt agaaaccttt ccttatttat aaaaaaatcg gttggtaatg
     3781 acaccaaccg attttcatct tattttgcca agaactgata aattgcagcc atatccactt
     3841 cgctcaagcc tgaatcattg gcttgattgt aggttttagt ggcttgctca ataagcgggt
     3901 aagatttgcc taatttcgca atttcttcgc ttgccaaatt aaaatctttg gtcatatgtt
     3961 tcatcataaa cgcaggcgga aattcattag cttggtacat cggcactttt gcttggaaga
     4021 tcgggctgtt cataaacgag cctgaaatca tttcgattac tttctctttc ggaatgccat
     4081 attggtcggc gaagtttaac gcctcgccat aggcttgaat gaagatgccc agtagcgagt
     4141 tgatcatcaa tttaatccca ccggctttac ccacttcacc ataatagaaa gtggtggtac
     4201 taaaggcagc gaaaagcggt ttgagcaact caacggtttc ttctttaccg gcagccagta
     4261 ccaatagttt acctgcttct gccactttgc ttgaaccgga aaccggagct tcaacaaatt
     4321 ctgcaccgtg ttgggctagt agagcttcta ccgcctggtt ttggcttggg gaaatggtgc
     4381 tcatattcac cactactttg ccgtttaatt cagccaacac ttcatcgctt aacacctgtt
     4441 gcacggcggc atagtctgca atcatcaaga aaatcacatc gtaggctttc accaattcca
     4501 acacagaagg atataatgtg ccgcctgctt caactacctt ttctgctttt gctgggtcgc
     4561 ggttgtaaac gcccacgttc actccgctat ttagcaaatg ttttgccatc ggttcgccca
     4621 tttgccctaa accaatccaa ccgactgctt gtgtattaat gtttttcatt atttttctcc
     4681 ttactgaata aagcaaattg attattgcga ttttccctca tcaagtcaaa tagagagaac
     4741 ttgaatatag caatggaaaa gagtagcatt ttagcactta cttttttgaa caataccaat
     4801 gaaaccaaca attcttttat acgattccgg aatgggcgga ttgacgattt acgatgaaat
     4861 ccgaaaagtg ttaccgcacg ctcactattt atattgcttt gataacgctt ttttcccata
     4921 ttccgagaag tcggaagcag ttttaattga gcgagcggtc aaaattgtgc aaaaaattgc
     4981 agaaaaacaa ccgcttgata tggttgttgt tgcttgtaat acggcaagca cagtggttct
     5041 gccggcattg cgtgagcatt ttaattttcc gatagtagga actgtaccgg caattaaacc
     5101 ggcagcggca atttccgaaa ctaaagtcat cggcttgctc gccactaaag gcacggttgc
     5161 tcgcccttat gttgatgaat tgataagaaa atatgctcag gattgtacgg tagaaaaaat
     5221 tggcacaacc gatttggttg aaattgttga agaaaaacaa cgaagcggta aagtggatat
     5281 gaaccgacta caaaaagtgg tcgaggcttg gcaaggtaag ccggaattgg atacggttat
     5341 actcggttgt acccattttc ccttagtcaa agctgaatta cagcaattat tgcccgatgt
     5401 gaaatatttt gttgatccgg gtgtaggtat tgccaaacgg gtgctaagcc ttttggaaga
     5461 acgcaaattt caacaaaaag ccgattttga aaatcaagca ttctgcacta aacaaagttc
     5521 tgcatttaat atcaaacaag acgttatgca gaattgggga tttaataatc tttcggtgat
     5581 tgatatttaa acaaaacaat ctgttttgat gaaaaaaggt tcagttgagc aaaaacttta
     5641 aaaaagggct tgcactcaat tttaaaatcc ctataatacg cagcacacaa cgacgcactg
     5701 ttgtgaacga tttaaaattg atttccagtg cgtcgtttct ttttgttctt taacaattta
     5761 tcagacaat
//
LOCUS       DANMCL010000120         5409 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.122, whole genome shotgun sequence.
ACCESSION   DANMCL010000120 DANMCL010000000
VERSION     DANMCL010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5409
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.122"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..474)
                     /locus_tag="PXF40_002494"
     CDS             complement(<1..474)
                     /locus_tag="PXF40_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803771.1"
                     /translation="MTLETFNQQKAKFHEQEKAVLAIQTELDKAKNILEALQNEKAEF
                     VARQKTNLANIGTLSADEYVEIKNKNSGLQARIEYYQALIVDLENKCYAEQEILFQQQ
                     NELKQIRRIILLEKAEVLFNQFIEQNKENLAEIYTYLFYSGKFKQNKNLTDESEEQ"
     gene            complement(484..690)
                     /locus_tag="PXF40_002495"
     CDS             complement(484..690)
                     /locus_tag="PXF40_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family transcriptional regulator"
                     /protein_id="HDL5803772.1"
                     /translation="MENTPAKQRFMKIDEVSAVTTLSETQIYRKMKAGDFPQSISIGA
                     NSKVWLESEIQQWIQRKIEQHRNQ"
     gene            complement(1160..2374)
                     /locus_tag="PXF40_002496"
     CDS             complement(1160..2374)
                     /locus_tag="PXF40_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5803773.1"
                     /translation="MTATKKPLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEK
                     QESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRL
                     TDLDRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEE
                     LAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKG
                     GKNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKY
                     KGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAYHRKNWLDRRRGIMQ
                     EWADFVEQCKSI"
     gene            complement(2577..2652)
                     /locus_tag="PXF40_002497"
     tRNA            complement(2577..2652)
                     /locus_tag="PXF40_002497"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2617..2619),aa:Ile,seq:cat)
     gene            complement(2746..3483)
                     /gene="pgeF"
                     /locus_tag="PXF40_002498"
     CDS             complement(2746..3483)
                     /gene="pgeF"
                     /locus_tag="PXF40_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HDL5803774.1"
                     /translation="MDKIIPNWNVPKHIHALTTLRTGGVSKPPFDSFNLGDHVNDEPQ
                     DIAQNRALLVEKFQLPQAPLFLTQTHSTRVIELPYSGDNIKADAIYTNQPNQVCLVMT
                     ADCLPVLFASQDGSEIAAAHAGWRGLCDGILEATVEKFNCPPHEISAWLGPAIGPNAF
                     QVGSEVADQFCAFDPRAKEALIEDSTTSGKFLGNLYQIATQRLNKLGITAISGGEYCT
                     YSQPELFFSYRRDKQTGRMATLIWRTE"
     gene            complement(3515..3901)
                     /locus_tag="PXF40_002499"
     CDS             complement(3515..3901)
                     /locus_tag="PXF40_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015432850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HDL5803775.1"
                     /translation="MTVIHTENAPAAIGPYVQAVDLGNMVLTSGQIPVNPETGEIPSD
                     IVQQTRQSLNNVKAIIEQAGLTVADIVKTTVFVKDLNDFAKVNAEYQAFFQENEHPNF
                     PARSCVEVARLPKDVGIEIEAIAVRR"
     gene            3982..4983
                     /gene="yejK"
                     /locus_tag="PXF40_002500"
     CDS             3982..4983
                     /gene="yejK"
                     /locus_tag="PXF40_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005623453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HDL5803776.1"
                     /translation="MSINVSEIVLHQLQKTEGENPELNTFLRENLLAISPEVDQMMLQ
                     LHQAYQSKAKAYGIFKPESVFAQQLNRLLEQETDFLPFSHSCAKMLAAELIKYPFADG
                     GTFILCRYTFLATEYLFIALIDSRNSMLVDEQLEIKRTQYLEIAQYDIACRINLTELK
                     LDATSNRYLTFVKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCEQGELSA
                     PQTREVKKQVFEYCKGQINSGEEIALNELSNALPTLNEIDFAQFTQEQEYGLEENIPP
                     MRNALKTLTKFSGSGKGVTISFNAELLGERLLWDELNDTLTIKGLPANLRDQLERNK"
     gene            5050..5391
                     /gene="bamE"
                     /locus_tag="PXF40_002501"
     CDS             5050..5391
                     /gene="bamE"
                     /locus_tag="PXF40_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HDL5803777.1"
                     /translation="MKMKSLLAAMLLALGVTACSTVEKVVYRIDVPQGNYLEQDKIAQ
                     LKVGMTAEQVEYLLGTPMLKNIFETHRWDYVFIKREGYKDPEQRNLFIYFDAKGLVSK
                     IDDSNANAEQK"
BASE COUNT         1459 a          990 c         1146 g         1814 t
ORIGIN      
        1 ttgctcttca ctttcatctg tgaggttttt attttgtttg aattttccac tgtagaataa
       61 gtaagtataa atttctgcta aattttcttt attttgttca ataaattgat taaataatac
      121 ttctgctttt tctaataaaa ttatacgtct gatttgtttt agttcattct gctgttggaa
      181 taatatttct tgctctgcgt agcatttatt ttctaaatca acaatcaacg cttgataata
      241 ttctatgcgt gcttgtaaac cactattttt atttttgatt tcaacatatt catctgctga
      301 aagcgtgccg atattggcta aattcgtttt ttgccgtgcg acaaattccg ctttttcgtt
      361 ttgcaatgcc tcaagaatat ttttcgcttt gtctaattcg gtctgaatag ctaaaacggc
      421 tttttcttgt tcgtggaatt tagctttttg ttggttaaat gtttcaagtg tcataatttg
      481 cccttattgg ttgcggtgtt gttcaatttt gcgttgaatc cattgctgga tttcactttc
      541 tagccatact ttgctatttg ccccaatact gatactttgg ggaaaatcgc cggctttcat
      601 tttgcgataa atctgcgttt ctgaaagcgt agttacggct gaaacttcat ctattttcat
      661 aaatcgctgt tttgctggtg tgttctccat tttgttttac tccgtaaaaa tttgctttgg
      721 cgtgctattg cctgctaacg tgtgaaagaa taaatcatct tggatttttt gctatttgtt
      781 agggctgtga aaggagattt tacagattag aggggcttaa ttctgatttg gaaaacttgc
      841 aagcggttat ttttctctga ttttttgcaa gttttcagcg gttctttcat cgttctgtca
      901 tcgagttttt aaaagtggtg tttctgcctg cgtaaatttg cgttttcttg cgtaaaattg
      961 cgtaataaaa aacggctata tgaaagtttt tcacgctata cggggcaatg tttgggctta
     1021 attttgcatt tgcgtagaaa tcgagacttt aagtgtgcgg gcgaggcgtg ggatagacgg
     1081 cacgggctgg gagctgatag gaaaaaatga aaatttttca tcaagcaaaa agaaaggcgg
     1141 attgctccgc ctttgtcatt taaatgctct tgcattgttc tacaaaatcc gcccattcct
     1201 gcattattcc acgtctgcgg tctagccagt ttttacggtg gtatgcactc attacggtgt
     1261 ctttgttcgt gtgggataaa caagcctcaa ttactagcgt ttcagtagta aaacgttcgt
     1321 gtaaataggt gctggcaatg cttcttaaac cgtgagccac taaaagccct ttatattttc
     1381 caccgcttaa gcgttttatt gcattattca cggtttggct attagccggt ttgtttcggt
     1441 ctgttcggtg tgtaaaaata tgtttatggt gtccgttata tttcttcatt tcctctagga
     1501 ttgcgatagc ttgttttgtt agcggtacag aatgcggatt ttttccgcct ttcattctat
     1561 ctgccggaat gttgagcgtc ttagtttccc aatctatatc gctccattgc accgctacgg
     1621 cttcaaacgg tctaagaata ttcaagagtt gccattcaac taataattta atttgaggcg
     1681 ttctatttga tttctgcaag tcttgcataa attcggctaa ctcttcgggc attattgctg
     1741 gctggtgtgt cgtgcttacg ctggaaaacg cctttttaat gacgctgatt gggttaaaat
     1801 taattctccc acacaatacc gcataatcaa gaatttctat taaattccct gctattctgt
     1861 gcaaagtgtc gggcattatc cgatctaagt ccgttaagcg gttgattgta tcggttaagg
     1921 taaaatcttc cagcgtatag ccttcaaaac gtgggaataa atgattttct aaccgctgta
     1981 agcatttttc cattgtttta ggcttgcatt ttccctttga tagcttccaa tcagcccatt
     2041 tataggcgaa agattgaata gattcttgct tttccttagc ttctctttgc attttggcta
     2101 aatgctcgaa agggtctaag ccttgtaaaa caagggtatt tagttcgtct ctctttaagc
     2161 gtgcttcggc taagctcatt tgcggatagc taccgattct attttttgtg cttcgcttgc
     2221 ctgttttggg gctgatatag ctataaatcc atactttcgc ttttttctgt gcaagaataa
     2281 atagcccgtt gctgtctgcg ataggcttcg catttgggga atatttgaga ttttttagta
     2341 atgtgtctga aagtggtttt ttagttgcag tcatttcttc taatccttga tatataaggg
     2401 tttatcgaag tttatgatcc ctaaattttc ccgttttcaa aatagggatc attttaggga
     2461 tcataaacac taagatacaa tgcaactaaa gaagacaata agagactata aaagaatcta
     2521 agttcttgat tttatagtaa atttgagaca atgaaagaca atatgcaacg cttagatggt
     2581 ccccccagcc ggacttgaac cagcgaccaa gcgattatga gtcgcctgct ctaaccactg
     2641 agctatgggg ggatttgaaa agtggttgga attatagaga aaaaccgagt agtcgtctag
     2701 aggcagaaga ttactcggtt aattattgaa cgagagaaaa tagggttatt ctgttcgcca
     2761 aattaaggtt gccattcgcc cggtttgttt gtctcggcgg taggaaaaaa acagttctgg
     2821 ttggctgtag gtgcaatatt caccgcctga aatggcggta atgcctaatt tattcagacg
     2881 ttgggtggca atttggtaaa gatttcctaa aaatttaccg cttgtagtgc tgtcttcaat
     2941 aagggcttct ttcgctcttg ggtcaaaagc acagaattgg tctgccactt cactcccgac
     3001 ttgaaaagca ttcggtccga tagccggccc tagccaagct gatatttcgt gtggcgggca
     3061 gttgaatttc tctaccgtcg cctctaatat gccatcgcat aacccacgcc agccggcgtg
     3121 tgccgccgca atttccgacc cgtcttggct ggcaaataat accggcaaac aatctgcagt
     3181 catcactaag cagacttggt ttggttgatt ggtgtaaatc gcatcggctt taatattatc
     3241 acctgaatag ggaagttcaa tcactcgggt gctgtgagtt tgggttaaaa acagcggagc
     3301 ttgtggtaat tgaaatttct caaccaataa agcacgattt tgagcgatat cttgtggctc
     3361 gtcattaacg tgatcaccta agttgaaact gtcaaaaggc ggtttgctta ctccgcctgt
     3421 tcttaaggtc gtcagtgcgt gaatatgttt aggcacattc caatttggaa taattttatc
     3481 catttgcaaa aaatctcaag aaaatgaccg cttgttatcg gcgtactgca atcgcttcga
     3541 tctcaatgcc aacatctttt ggtaaacgag ccacttctac gcaagaacga gccggaaaat
     3601 tagggtgttc gttttcttgg aagaaggctt ggtattccgc atttaccttt gcgaagtcgt
     3661 taagatcttt gacaaatacg gtggtcttta caatatcggc aacggttaag ccggcttgtt
     3721 cgataatggc tttcacgttg ttcagagatt ggcgggtttg ttgcacaata tcactcggga
     3781 tttcgccggt ttcaggattc acgggaattt gcccagaagt taaaaccata ttgcctaaat
     3841 caactgcttg cacataaggc ccaatcgctg ccggtgcatt ttctgtgtgg ataactgtca
     3901 tcttgtgttc ctcttaatga aaaataaacg gattaatgat aatatctttt cttattattt
     3961 ggaataaaga gaagtgaatt aatgagcatt aatgtttctg aaatcgtgtt acatcaatta
     4021 caaaaaacag agggcgagaa cccggagctt aatacgtttt tgcgagaaaa tttattggca
     4081 atttcccctg aagtcgatca aatgatgttg caattacatc aagcctatca aagtaaagca
     4141 aaggcttacg gtatatttaa accggagtcg gttttcgctc aacagctcaa ccgcttgttg
     4201 gagcaagaaa ccgatttttt accttttagc catagctgtg ccaaaatgct tgcagcagag
     4261 ctgattaaat atccgtttgc cgatggtggc acttttattt tgtgtcgtta cactttttta
     4321 gctaccgaat atttgtttat tgcgttgatt gatagccgta attcaatgct ggttgatgag
     4381 cagttagaga ttaaacgcac gcaatatctc gaaattgcac aatatgatat tgcctgccgc
     4441 attaatttaa ctgaactgaa acttgacgca acgtcaaatc gctatttaac ttttgtgaaa
     4501 ggcagagtag ggcgtaaaat tgccgatttc tttatggatt ttttaagtgc ggaagaaggg
     4561 tttaatccac aattgcaaaa tcaaaccttg ttgcaagcgg tgagcgatta ttgtgagcaa
     4621 ggggagttat ctgcccctca aactcgagaa gtgaaaaagc aggtgtttga atattgtaaa
     4681 gggcagataa atagtggaga ggaaattgcg ttaaatgagc tttccaacgc attgccaaca
     4741 ctgaatgaaa tcgattttgc ccaatttacg caagagcaag aatacggctt ggaagagaat
     4801 attccgccta tgcgaaatgc ccttaaaacc ctgacgaaat tttccggttc gggcaaagga
     4861 gtaacgatta gctttaacgc agaattatta ggagagcgtt tactttggga tgaactaaac
     4921 gacacactga caatcaaagg attaccggca aatctgcgtg accagctgga acgtaacaaa
     4981 taatggaaaa tttttatcag tttaggtatt atctcgttat ctgaattttg gattatcaaa
     5041 aggtcaatta tgaaaatgaa atctctttta gctgcaatgt tgcttgcact gggtgtaacg
     5101 gcttgttcaa ccgttgagaa agtggtgtac cgtattgatg taccgcaagg caattactta
     5161 gaacaagata aaattgctca acttaaagtc ggtatgacag cggaacaagt tgaatatttg
     5221 cttggtacac caatgttaaa gaacattttt gaaacccacc gttgggatta tgtgtttatt
     5281 aaacgtgaag gttataaaga tcctgaacaa cgcaatctgt ttatttattt tgatgctaaa
     5341 gggttagtat caaaaattga tgacagcaat gcgaatgcag aacaaaaata ggacgatttg
     5401 ttggttcga
//
LOCUS       DANMCL010000121         5343 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.123, whole genome shotgun sequence.
ACCESSION   DANMCL010000121 DANMCL010000000
VERSION     DANMCL010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5343
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.123"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            69..914
                     /locus_tag="PXF40_002502"
     CDS             69..914
                     /locus_tag="PXF40_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015431538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5803778.1"
                     /translation="MKEKIIKTNGIELCTESFGNKKNPAILLVAGATVSMLYWDTEFC
                     QQLSEKGFFVIRYDNRDVGKSTNYEPGSTPYDIVDLTNDAISILDGYKIDKAHFVGIS
                     LGGLISQIASIKFADRVNSLTLMSSGPWGDSDPTIPEMDTSILDFHSKAGTVNWTNED
                     SVVNYLIQGAELMSGKKQFDKQRSEKLIRAEFNRANNYISMFNHAALQGGGEEYWNRL
                     NEIKQPTLIIHGTDDKIWHYKNAGFLLEKIKGSNLITLEGTGHELHVDDWKSIIDGIE
                     KHIND"
     gene            complement(1239..2645)
                     /locus_tag="PXF40_002503"
     CDS             complement(1239..2645)
                     /locus_tag="PXF40_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDL5803779.1"
                     /translation="MIVKFFKKHGKGKASSCKACVDYLLNKPDDTAQILQGDPRLSQS
                     IADSLDFNNTYTAGCLSFEESDLPEIQKREIMARFEKAMFAGLEPEQYNIAWVQHTDK
                     GRLELNFVIPNVEMTSGKRLQPYYDRADRPLAENFKQVINHEYSLSDPNNPIKQKNLI
                     DRKDLPTDKKQALQAITDGLTALANAGQINDRQDVINALERAGFEIARITPKNLSIKT
                     DGQNLRLKGAFYEQDFRFSTDLSADITERAREYKRDSAERYQTARAKLDTAVTARREQ
                     FSRKYPNRAGEIDKKYRENVSLADPNRLDDISLDSHNRRRFDVAGEERLSRDDRMAKF
                     SRDSQRAEWGDQAINLQNGERDKALCSSGQGFYQLNVGREPESNRNPRNQETGEKING
                     DRTRTTLRENLENLARTARNRASEIIERIRELASRKRLDHSTVQRNQRAINDITEFNK
                     QLETVISQRKRQSRGMSR"
     gene            complement(2642..2947)
                     /locus_tag="PXF40_002504"
     CDS             complement(2642..2947)
                     /locus_tag="PXF40_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HDL5803780.1"
                     /translation="MKREKEIKIRLTENEYQALLERKTKARLAEWVREVALEQQPKRQ
                     PKVIDPALLFELNRIGVNLNQIARQCNSQKPSIDLVSVLATLREIEKNLKKLRELSL"
     gene            4141..4278
                     /locus_tag="PXF40_002505"
     CDS             4141..4278
                     /locus_tag="PXF40_002505"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803781.1"
                     /translation="MKPLRIGARVIYPLQDLDKQIAYLEANLLENIKVHFIVESIEIK
                     G"
     gene            4413..5330
                     /locus_tag="PXF40_002506"
     CDS             4413..5330
                     /locus_tag="PXF40_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cephalosporin-hydrolyzing class A beta-lactamase
                     ROB-1"
                     /protein_id="HDL5803782.1"
                     /translation="MLNKLKIGTLLLLTLTACSPNSVHSVTSNPQPASAPVQQSATQA
                     TFQQTLANLEQQYQARIGVYVWDTETGHSLSYRADERFAYASTFKALLAGAVLQSLPE
                     KDLNRTISYSQKDLVSYSPETQKYVGKGMTIAQLCEAAVRFSDNSATNLLLKELGGVE
                     QYQRILRQLGDNVTHTNRLEPDLNQAKPNDIRDTSTPKQMAMNLNAYLLGNTLTESQK
                     TILWNWLDNNATGNPLIRAATPTSWKVYDKSGAGKYGVRNDIAVVRIPNRKPIVMAIM
                     STQFTEEAKFNNKLVEDAAKQVFHTLQLN"
BASE COUNT         1513 a         1078 c         1095 g         1657 t
ORIGIN      
        1 aaaaaaaact actttggata ttaattttag gactgataat aatcagttgc aaacaaagga
       61 aaacagaaat gaaagagaaa ataattaaaa caaacggcat tgaactctgt acggaaagtt
      121 ttggaaataa gaaaaatcca gcaatccttt tggtagcagg tgcaaccgta tcaatgctgt
      181 attgggacac tgaattttgc caacaattat ctgaaaaagg attttttgtt attcgttacg
      241 acaacagaga tgtaggaaaa tccactaatt atgaaccagg ttctactcca tacgatattg
      301 ttgacttaac taatgacgct atttcaatat tggatggcta caagattgac aaagcacatt
      361 ttgtggggat ttctttgggc ggactaattt ctcaaatagc atcaataaag tttgccgaca
      421 gagttaactc cttaactctt atgtcatcag gcccttgggg agactcagac ccaactatac
      481 ctgaaatgga cacgagtatt ttagatttcc atagtaaagc aggtacagtc aattggacaa
      541 atgaagacag tgtggtaaac tatttaattc agggtgcaga attaatgagt ggcaagaaac
      601 aatttgacaa acaaagaagt gaaaaactga taagagctga gttcaataga gccaacaatt
      661 atataagtat gttcaatcac gctgcattgc aaggtggtgg tgaagaatat tggaacagat
      721 taaacgaaat caaacaaccc accttaatta tccacggaac agacgacaaa atttggcatt
      781 ataagaatgc aggtttttta ctagaaaaaa taaaaggttc aaatctaatc acccttgaag
      841 gtacaggaca cgaattacac gttgatgatt ggaaatcaat aattgatgga atagaaaaac
      901 acataaatga ctgataaaca aaaacaacga cccgctaaca atgtatataa aaaataggcg
      961 aaacagtagt aaattcaagg cttttggctc gtattatact ttgtgcttaa ccgaaaattt
     1021 ggcacttcga aatcgcctac ttttcgctga atttacaatc caagtgcaac aaaaaaagaa
     1081 gtactcatca actagaatat aattttgttt ccacacaaaa accacttcca aatgatgagt
     1141 acttcctacc gacatcttac aataagccga gtgtttgaga aataccattt attaaactgt
     1201 ctttttccat aagtgttgcc ataattctcc cccttgtttt atctgctcat acccctgctt
     1261 tgtcttttgc gttgagatat taccgtttca agctgtttat taaactctgt aatgtcgtta
     1321 attgctcgct gatttcgttg tactgttgaa tgatcaaggc gttttcggct cgcaagctct
     1381 ctaattcttt cgataatttc actcgctctg tttcttgctg ttctagcaag gttttcaagg
     1441 ttttctcgta aagtagttct agttcggtcg ccatttattt tttcccctgt ttcttggttt
     1501 cttggatttc gattactttc aggttctcgc cccacgttga gttgataaaa tccttgtcca
     1561 ctgctacaca aggctttatc cctttctccg ttttgcaagt tgatagcttg atccccccac
     1621 tctgctcttt ggctatctcg gctgaatttt gccattcggt catctcttga taggcgttct
     1681 tcgcctgcca cgtcaaaacg cctgcggtta tggctatcaa ggctaatatc gtcaaggcga
     1741 ttagggtcgg caagcgatac attctcacgg tattttttat caatttcgcc tgctcgattt
     1801 ggatattttc ggctaaattg ttccctgcgt gctgtaactg ctgtatcaag ttttgctcgt
     1861 gccgtttgat agcgttctgc actatctcgc ttgtactctc tagctctttc tgtgatgtct
     1921 gctgaaaggt ctgtgctaaa tctaaaatct tgctcataga aagccccttt taatcttaaa
     1981 ttctgtccgt cagtcttgat tgataggttt tttggcgtaa tgcgtgcaat ttcaaaacct
     2041 gcacgttcta gggcatttat aacgtcctgt cggtcgttta tctgccctgc gttcgctaaa
     2101 gctgttaaac cgtccgtaat cgcctgtaaa gcctgttttt tatcggttgg taggtctttg
     2161 cggtcaatca ggtttttttg ctttataggg ttgtttgggt cgcttaggct gtattcgtgg
     2221 ttgattacct gcttgaagtt ttcagcaagt gggcggtctg ccctgtcgta gtagggttgt
     2281 aggcgttttc cgcttgtcat ctctacgttt gggataacga aattcagctc aagcctgcct
     2341 ttgtcggtgt gttgtaccca cgcaatgtta tattgttcag gctcaagccc tgcaaacatt
     2401 gccttttcaa agcgtgccat aatctcacgc ttttgtattt cgggtaggtc gctttcttca
     2461 aaagacaagc aacctgcggt gtaagtgtta ttaaaatcaa gactatcagc aatactttgt
     2521 gatagtcggg gatcgccctg caggatttgg gcggtgtcgt caggcttatt tagtaaatag
     2581 tccacacaag ccttgcaact actagctttt cccttaccgt gtttcttaaa aaatttaacg
     2641 atcataggct caattctcgc aattttttga gatttttttc aatttctcgc aaggtcgcca
     2701 acacgctaac aaggtcaatg ctcggctttt gactgttgca ttgtcgggcg atttggttca
     2761 ggtttacgcc tatgcggttc agctcgaaca gtaacgcagg gtcgattact ttcggctgtc
     2821 gcttaggttg ctgttctagg gcaacttccc gaacccactc cgcaagcctt gctttcgttt
     2881 ttctctctaa caaggcttga tactcgtttt cggtgagcct gatttttatc tctttctcac
     2941 gtttcataat ggtgtccgtt cttctatttt gaccgctgaa agcggtcggg ggtcaagggg
     3001 gcaaagccct tttgcaaggt caaaaaggaa actcgaagag tacccttttt gtgtccttgc
     3061 tattaaaaaa gacaatagta caccaaaagc cccgagagtg atatataaaa atcagcggag
     3121 ccgataggcg acttcgtttt attaggcgaa catcgtgagc ctttgaacca atataaaaat
     3181 aaaaaaattt attattaggg aagtggttat tgtgggcggt aggtttttag tgttggaaag
     3241 ctgttggaaa gctcgtgggt aactcgcaga gttatccatc agcttttcaa tggcttttca
     3301 atacgacccg caggggaaaa accgttaaac cgtccacatt aaccgctgac ccaaaaagaa
     3361 cgctttttac taaaagattt ctattcggtt ctcaaatgtt gcgtgaatgg ggcaacaata
     3421 aaacgttgtg gcgtttatca gggtgggaat tgcagactta aacaatcaat tccgctgtat
     3481 ccttaaatct cgcttatcag gtgtgcttgt atttcttggg gctttcgcct ttctaaccgt
     3541 agcacgaaac ggagacagag cttaattttc gtattaagaa cgttatcact tctacgcctg
     3601 tttattcttc cgaagtccga gctgaagacc gtctaattta aggtttacgt ttcttgttta
     3661 cgtcgttgaa tggttttttg gtagtaggga cgcttcgcaa tctcttgcat tactagctac
     3721 cctttgctat gattagattg ttcacgtctg gatcatagca aagaacgtac tgatacagat
     3781 tataggaaaa gggatcgaat gtcaaaagtt cgatcccttt ttcttttcta aagcattggt
     3841 attaaaggct ttaaggtgta ttttattaaa atctgtacac ctttgtgaaa atccatacac
     3901 ctttcttacc gtgtaatttt atgaaaattc gtgcaccttt ctgctaacgc cctgcggttg
     3961 ttagactaaa aaagccattg aaagcaagtt tcaacggctt tttcagtccc gaataaaaca
     4021 aaaccgcctt gttaggcggt tatgtgttaa aatcactttc gcactatggc ggcggctcgc
     4081 actaccgttc atagtgtgag cctagtcgct tagccttata gtgctaaggg ggtgatttat
     4141 gtgaaacctc tacgaattgg ggcaagggtt atttatccgc ttcaagactt agacaagcaa
     4201 attgcatacc tagaggcgaa cttacttgag aatatcaaag tgcatttcat tgtagaaagc
     4261 attgagatta aaggctaaat tgctagactt ttgcgcttaa attcgccaaa atctgttttt
     4321 ttgttctaca aacaaattat ccgaatttcc gcgcaatgta cgtttcaggc tgcctgaaaa
     4381 gaaatttatt tagtaaaatc aaaggataat ttatgttaaa taagttaaaa atcggcacat
     4441 tattattgct gacattaacg gcttgttcgc ccaattctgt tcattcggta acgtctaatc
     4501 cgcagcctgc tagtgcgcct gtgcaacaat cagccacaca agccaccttt caacagactt
     4561 tggcgaattt ggaacagcag tatcaagccc gaattggcgt ttatgtatgg gatacagaaa
     4621 cgggacattc tttgtcttat cgtgcagatg aacgctttgc ttatgcgtcc actttcaagg
     4681 cgttgttggc tggggcggtg ttgcaatcgc tgcctgaaaa agatttaaat cgtaccattt
     4741 catatagcca aaaagatttg gttagttatt ctcccgaaac ccaaaaatac gttggcaaag
     4801 gcatgacgat tgcccaatta tgtgaagcag ccgtgcggtt tagcgacaac agcgcgacca
     4861 atttgctgct caaagaattg ggtggcgtgg aacaatatca acgtattttg cgacaattag
     4921 gcgataacgt aacccatacc aatcggctag aacccgattt aaatcaagcc aaacccaacg
     4981 atattcgtga tacgagtaca cccaaacaaa tggcgatgaa tttaaatgcg tatttattgg
     5041 gcaacacatt aaccgaatcg caaaaaacga ttttgtggaa ttggttggac aataacgcaa
     5101 caggcaatcc attgattcgc gctgctacgc caacatcgtg gaaagtgtac gataaaagcg
     5161 gggcgggtaa atatggtgta cgcaatgata ttgcggtggt tcgcatacca aatcgcaaac
     5221 cgattgtgat ggcaatcatg agtacgcaat ttaccgaaga agccaaattc aacaataaat
     5281 tagtagaaga tgcagcaaag caagtatttc atactttaca gctcaactaa caaattcagc
     5341 atg
//
LOCUS       DANMCL010000122         5061 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.125, whole genome shotgun sequence.
ACCESSION   DANMCL010000122 DANMCL010000000
VERSION     DANMCL010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5061
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.125"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            52..525
                     /locus_tag="PXF40_002507"
     CDS             52..525
                     /locus_tag="PXF40_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009874984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HDL5803783.1"
                     /translation="MLEKITACPCQTGKRYAECCQPFHLKQTFASTAEQLMRSRYSAY
                     TLVNIPYIVETTVPSQQKLLDQTAMKEWAENTKWVGLSVLNHLPSLSRIHSQVEFKAF
                     FDTDEGIQGHHETSLFVQIDERWFFVDPTVPLPHQKQPCVCGSGKKFKHCCGNYL"
     gene            597..1226
                     /locus_tag="PXF40_002508"
     CDS             597..1226
                     /locus_tag="PXF40_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HDL5803784.1"
                     /translation="MDFSKILSQVLDTAKDAATNGLIKGNSKNDQIAKIGGGAVAIGL
                     ISMLFGRNGGSSLAKLGSLAAIGSLAYQAYQKYQAQNSSVSELSQNNFENVDENVASK
                     VILQAMIAAAASDGAITEEEKAAIVSQVGDEAEVIEWIRQEMDTPATVEEIARQVGND
                     QALATQVYLASRAVCRDLERKEIVFLANLADALGLAEALVEQLEKDAGF"
     gene            complement(1304..1951)
                     /locus_tag="PXF40_002509"
     CDS             complement(1304..1951)
                     /locus_tag="PXF40_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HDL5803785.1"
                     /translation="MISIRNVSKQYRTNNGWKTILKDINFELKKGEKVGILGRNGAGK
                     STLIRLMSGVEPPTTGTIERQMSISWPLAFSGAFQGSLTGMDNLRFVSRIYDADFDYV
                     KSFTEEFSELGEYLYEPVKSYSSGMKARLAFALSLSIEFDCYLIDEVIAVGDARFAAK
                     CKHELFEKRKDRSLILVSHSPASIKEYCDSAMVLEEGIMHTFDSIDNAYNFYNKT"
     gene            complement(1948..2745)
                     /locus_tag="PXF40_002510"
     CDS             complement(1948..2745)
                     /locus_tag="PXF40_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HDL5803786.1"
                     /translation="MRYGDNTTFKRSCVIQKRVIHALLMRELITRYGRKNIGFLWLFI
                     EPLLLTLVITVAWKYIKADKFSTLNIIAFMITGYPIAMMWRNASNRAQGAISANLSLL
                     YHRNVRVLDTIFTRVLLEVTGASIAQILLMTIFIAIGWIEMPNDIFYMLCAWILMAFF
                     ALGLGLIICTLAHYIEPFGKIWGTFSFFLLPLSGAFFFVHNLPLTAQNIALWFPMIHG
                     TEMFRHGYFGETVITYESISYLIVSDIILLFIGLLCVRSFSKGIEPR"
     gene            complement(2745..3848)
                     /locus_tag="PXF40_002511"
     CDS             complement(2745..3848)
                     /locus_tag="PXF40_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5803787.1"
                     /translation="MSKKKKHFLANPLLWLTVIIPTACSGIYYSLFASDIYVSESSFV
                     VRSPNNQSSLTGVGALLQNSGFARSQDDTYSVQEYMRSRTALEQLEAEIPVKRFYSEQ
                     GDLLSKFNGLGFNDTQEAFYRYFKERLNIDVDSISGIATLRVRAFNAEEGQKINENLL
                     QQGETLINRLNERARQDTVEFAEERVKEAEKDVNNTALALSQYRTKNKIYDLPAQSSV
                     QLSLISTLKSELIRVETQLAQLKSITPDNPQVAALQMRQKSLKKEIDDQSKQLAGGNT
                     SVATQTAEYQRLVLANELAQQQLAAAMTSLQNTRGEADRQQLYLEVIGRPSKPDWALE
                     PYRIYNIISTFFIGLILFGVLSLLLASIREHKN"
     gene            complement(3920..>5061)
                     /locus_tag="PXF40_002512"
     CDS             complement(3920..>5061)
                     /locus_tag="PXF40_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015702017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HDL5803788.1"
                     /translation="SLISACSSLPTSGPSYSEILASNENTAETQLPEVNLIKLDNITV
                     QNLYQEQQSQRFSGFDGSMGVGGYAGTVNVGDILEISIWEAPPAVLFGGTFSAEGQGN
                     GHLTQLPQQMVNKNGTVTVPFIGNIKVAGKTPEVIQNQIVGALSRKANQPQALVRIAN
                     NLSSDVTVIRQGNSIRMPLSANNERILDAVAAVGGTSENIEDVTVRLTRGNKVRSMAF
                     ETLIADPSQNITLRSGDVIALMNTPYSFTGLGAVGNNQQMRFSSKGITLAEAIGKMGG
                     LIDERSDPRGVFVFRHIPFTQLDYDNQAQWREKGYAEGMDVPTVYQVNLLKPQSMFLL
                     QRFPIQDKDIVYVSNAPLSEFQKFLRMIFSITTPITGTANTIRAY"
BASE COUNT         1600 a          959 c          906 g         1596 t
ORIGIN      
        1 tatttatagc gtaaactttt cacatcttta tttttatgcg gaaatgtaaa aatgttagaa
       61 aaaatcaccg cttgtccttg ccaaacaggc aaacgctacg ctgaatgttg ccaacctttc
      121 catttaaaac agacatttgc atcaacggca gagcaattaa tgcgctcccg ttacagtgct
      181 tatactttgg ttaatattcc ctatattgtg gaaacgacag tgccaagtca gcagaaatta
      241 cttgatcaga ctgcaatgaa agagtgggct gaaaatacaa aatgggtagg attatccgtg
      301 ctaaatcact taccttctct ttcgagaata catagtcagg ttgaatttaa agcctttttt
      361 gatacagatg aggggataca gggacaccac gaaacctctc tttttgttca aattgatgag
      421 cgatggtttt ttgtggatcc taccgtacct ttgcctcatc aaaaacaacc ttgtgtatgt
      481 ggctccggaa agaagtttaa gcactgttgt ggaaattatc tttaatttga attgaactct
      541 tgtttgaatc taaggactaa tgagtaaatt tcatttactt accaagagga acaaaaatgg
      601 atttcagtaa gattttaagt caagtattag atacagcaaa agatgccgct acaaacggat
      661 taattaaagg taattctaaa aacgatcaaa tcgctaaaat tggtggcggc gctgtcgcta
      721 ttggtttaat ttcaatgtta tttgggcgta atggcggttc aagtttagca aaattaggct
      781 ctttagccgc tatcggtagc cttgcttatc aagcatacca aaagtatcaa gcgcaaaatt
      841 catcggtttc agaacttagc caaaataatt ttgaaaatgt agatgaaaat gtggcaagta
      901 aagtgatttt acaagcaatg attgccgctg ctgcttcaga tggtgctatt actgaagagg
      961 aaaaagcagc tattgtttcc caagttggag atgaggctga agtcattgag tggattcgtc
     1021 aagaaatgga cactccggct acagttgaag agattgcccg ccaagtaggt aatgaccaag
     1081 cattggctac acaagtttac ttagcttccc gtgcagtatg cagagattta gaacgcaaag
     1141 aaatcgtttt cttagctaat ttagctgatg ctttaggttt agctgaggca ttagttgaac
     1201 aattagaaaa agacgcaggt ttctaatttt cagttttagt aacaagcggt tatattttga
     1261 gagttttttg cgaaaaactt gtgaaatata accgcttgtt cttttatgtt ttattgtaga
     1321 aattataagc gttatctata gaatcaaaag tatgcatgat accctcttct aaaaccattg
     1381 cagaatcgca atattcttta attgaggctg ggctatgaga aactaaaatc aatgaacggt
     1441 ctttccgttt ttcaaaaagc tcgtgcttac atttggcagc gaatcgagca tcgcctactg
     1501 caatcacttc atcaattaag taacaatcaa attcaataga aagcgataat gcaaaggcta
     1561 aacgggcctt cataccagaa gaatagcttt ttaccggttc atataaatat tcaccgagtt
     1621 ctgaaaattc ttcggtgaaa gattttacat agtcaaaatc agcatcataa attcggctga
     1681 cgaaacgaag attatccatt ccggtcaaac taccctggaa tgcaccacta aatgccagtg
     1741 gccaagaaat cgacatttga cgttcaatcg tacctgttgt tggaggttct actccgctca
     1801 ttaaacggat taaggttgat tttcctgcac cattgcgccc taaaatcccc actttttcgc
     1861 cttttttcag ctcaaaattt atatctttta atatggtttt ccaaccgtta ttagttcgat
     1921 attgcttact tacatttcta atactaatca tcttggttct atccctttac taaaacttct
     1981 cacacaaagc agtcctataa atagaagaat aatatcactt actataagat aactaatgct
     2041 ctcataggta attaccgttt caccaaaata accatgtcta aacatttctg taccatgaat
     2101 cattggaaac cataaggcaa tattttgagc agttagcggt aaattatgga caaagaagaa
     2161 tgcaccagaa agaggaagta gaaagaagct gaatgttccc caaatcttac caaaaggttc
     2221 aatataatgt gctaaagtac agataattaa acctaaacct aaggcaaaaa atgccattaa
     2281 tatccaagca cagagcatat agaaaatatc gttaggcatt tctatccaac caatagcgat
     2341 aaatatagtc attaagagaa tttgggcgat agatgcgcca gtaacttcta ataaaactcg
     2401 agtaaatatc gtatctagca ctctcacatt tctgtggtaa agcaaactta agtttgctga
     2461 tattgctcct tgagctctat tagaggcatt tctccacatc attgcgatag ggtagcctgt
     2521 aatcataaaa gcgataatat ttaaagttga aaacttatct gcttttatat atttccaagc
     2581 aacagtaatc actaacgtta acaataatgg ttcgataaaa agccataaga agccaatatt
     2641 tttacgccca taacgagtaa ttaattccct cattaaaagg gcgtgaatca cccgtttttg
     2701 aatcacacag gaacgtttaa aggttgtatt atcaccatat cgcattagtt tttatgctct
     2761 ctaatacttg ctagtaacaa acttaatact ccaaatagaa ttaagccgat aaaaaaagtt
     2821 gatataatat tataaattct gtagggttct aatgcccaat ctggtttgct tggcctacca
     2881 attacctcta aataaagttg ttggcgatca gcttcacctc gtgtattttg taatgaagtc
     2941 attgctgctg caagttgttg ctgagctaat tcgttagcaa gaaccaaacg ttgatattca
     3001 gcagtttgcg ttgctacaga agtattacct cctgcaagtt gtttggactg atcatcaatt
     3061 tcttttttca aacttttttg acgcatttgt aatgcggcta cctgaggatt atccggcgta
     3121 attgacttca attgtgctaa ttgtgtttct acccgaatta attcactttt taaggtagaa
     3181 attaatgaga gctgaacgct ggattgtgcc ggtaaatcat aaattttatt tttagttcga
     3241 tattggctta atgctaacgc agtattattg acgtcttttt cggcctcttt tacacgctct
     3301 tctgcaaact caaccgtatc ttgtcttgct ctttcattaa ggcggttaat taatgtttcc
     3361 ccttgctgta ataaattctc gttaattttt tgtccttctt ctgcattaaa agcacgaacg
     3421 cgtagcgttg caatacctga aatagaatcg acatcaatat tcagacgttc tttaaaataa
     3481 cgataaaatg cttcttgggt atcgttaaat cctaaaccgt taaatttgct tagtaaatca
     3541 ccttgctcac tataaaaacg ctttaccgga atttctgctt caagttgttc taatgcggta
     3601 cgggaacgca tatattcctg aactgaatag gtatcatctt gagaacgggc gaaaccggag
     3661 ttttgcaata aagcaccaac gcctgttaag ctcgattgat tattgggcga acgaaccaca
     3721 aagctagatt ctgaaacata aatatcagag gcaaataagg aataataaat tccagaacaa
     3781 gcagttggaa taattacagt tagccacaac aaagggttgg ctaaaaaatg ttttttcttc
     3841 tttgacataa aatcctcaac gaaaagtgtt acaagcggtc attttttaat gattttttac
     3901 cattttatct atgagctaat tagtacgctc taattgtatt agctgtacct gtaattggtg
     3961 tagtaatgga gaaaatcatt ctcaagaatt tttgaaattc agacagtgga gcattcgaca
     4021 catatacaat atctttatct tgaataggga aacgctgcaa taaaaacatt gattgcggtt
     4081 ttaataaatt cacctgataa acagttggaa cgtccattcc ctctgcataa cctttttcac
     4141 gccattgagc ttggttatcg taatctaatt gtgtaaaagg aatatggcgg aatacgaaca
     4201 caccacgagg gtctgaacgc tcatcaatta atcctcccat tttaccgata gcttcagcaa
     4261 gggtaatgcc tttacttgaa aaacgcattt gttgattatt acctactgct cctaatccgg
     4321 taaagctata aggagtattc attaaagcaa taacatcacc tgaacgtaat gtaatatttt
     4381 gtgaggggtc agcaattaat gtttcaaacg ccattgaacg cactttattt ccacgtgtta
     4441 aacgaactgt tacatcttca atattttcgc ttgtaccacc tactgccgca actgcatcta
     4501 aaatacgctc attattggca cttaatggca tacgaatgct atttccttgg cggataaccg
     4561 taacatcaga cgacaagtta ttcgcaatac gaactaatgc ttgaggttga ttagctttac
     4621 ggctcaatgc tccgacaatt tgattctgaa ttacttcagg tgtttttcca gcaactttaa
     4681 tattaccgat aaaaggcaca gttaccgttc catttttgtt caccatttgc tgaggtaatt
     4741 gggttaaatg cccattacct tgcccttcag cactaaatgt tccaccaaat agcacggcag
     4801 gtggcgcttc ccaaatggat atttctaata tatcgcctac attaactgtt ccagcataac
     4861 cacccacacc cattgagcca tcaaatcctg aaaaacgttg agattgttgc tcttggtata
     4921 agttttgtac ggtgatgtta tctaacttga ttaaattgac ttcaggcaac tgcgtttcag
     4981 ctgtattttc attacttgct aagatttcgc tatagcttgg gccggacgtt ggtaggctag
     5041 agcaggctga aattaatgat a
//
LOCUS       DANMCL010000123         5048 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.126, whole genome shotgun sequence.
ACCESSION   DANMCL010000123 DANMCL010000000
VERSION     DANMCL010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5048)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5048)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5048
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.126"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..581
                     /locus_tag="PXF40_002513"
     CDS             <1..581
                     /locus_tag="PXF40_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HDL5803789.1"
                     /translation="TTIMQRISGAKQIDSLTVKIKDDIESQTAEKSIAELLVAKHGKK
                     DFFIMNSDTIKQTITSTTNTMTLLISSIALISLIVGGIGVMNIMLVSVTERTREIGVR
                     MAIGAKQRNILQQFLIEAVVICLIGGVIGILLASAIIWAFNTLGTNFKMMLSPESVII
                     AVLCSTLIGVVFGYIPARNAAQLNPITALAQE"
     gene            665..1435
                     /locus_tag="PXF40_002514"
     CDS             665..1435
                     /locus_tag="PXF40_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005604026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HDL5803790.1"
                     /translation="MTITNTELEQILNTKLNSSAINDYAPNGLQVEGKREIKKIITGV
                     TATLPLIEKAIEKNADAILVHHGYFWKSENPCIRGMKGKRIKQLLVNDINLFGYHLPL
                     DIHSELGNNAQLAKHLGVKNLQGLEDRPNSIPMYGELENPISANELKQKLEKTLQRTV
                     ILCDEFVHSPQKMIKTIGICSGGGQGYIDLAFEKGCDAFISGEISEQTTHSAREQGIY
                     YFACGHHATERDGVKALGEWLAVEYGLDVEFIDIDNPA"
     gene            complement(1516..2646)
                     /gene="nrdB"
                     /locus_tag="PXF40_002515"
     CDS             complement(1516..2646)
                     /gene="nrdB"
                     /locus_tag="PXF40_002515"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HDL5803791.1"
                     /translation="MAYTTFSQHKNDQLKEPMFFGQNVNVARYDQQKYEIFEKLIEKQ
                     LSFFWRPEEVDVSQDRIDYAQLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWTFSETIHSRSYTHIIRNIVNDPSIVFDDIVTNEEIIKRAKDISAYYDD
                     LIRDSQLYSLYGEGSYQVDGKTCEVSLRSLKRQLYLCMMSVNALEAIRFYVSFACSFA
                     FAERQLMEGNAKIIKFIARDEALHLTGTQHILNIMAYGNDDPEMAEIARECRQEAYEL
                     FLSAAEQEKAWAEYLFKDGSMIGLNRDILVQYIEYITNIRMQAVGLPLPFKARSNPIP
                     WINAWLVSDNVQVAPQEVEVSSYLVGQIDAKVDSRDFGDFEL"
     gene            complement(2673..4943)
                     /gene="nrdA"
                     /locus_tag="PXF40_002516"
     CDS             complement(2673..4943)
                     /gene="nrdA"
                     /locus_tag="PXF40_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HDL5803792.1"
                     /translation="MNKSLMVTKRNGTREQLNLDKIHRVITWAAEGLENVSVSQVELR
                     SHIQFYEGIRTSDIHETIIKAAADLITKDTPDYQYLAARLAIFHLRKKAYGQFEPPHL
                     YEHVKKLVALGKYDADLLSDYTPEEWETMNGFIDHWRDMTFSYAAVKQLEGKYLVQNR
                     VSGEIYESAQFLYLLVAACLFSKYPTASRLDYIRRFYDATSTFKISLPTPIMAGVRTP
                     TRQFSSCVLIECDDSLDSINATSAAIVKYVSQRAGIGINAGAIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATVYFPIWHLEAESLMVLKNNRGVEENRARHMD
                     YGVQINKMMYQRLIKGGEISLFSPSDVPGLYEAFFADQAKFEQLYLQYEQDPSIRQRK
                     VKAVELFSLLMQERASTGRIYIQNVDHCNTHSPFNPRVAPIRQSNLCLEIALPTKPLA
                     HFYDEQGEIALCTLSAFNLGTLSNLDELEELADLVVRALDALLDYQDYPVLAARNSSL
                     NRRALGVGVINYAYYLAKNQVRYSDGSANNLTHRTFEAIQYYLLKASMNLAKEQGACA
                     YFDQTTYAKGLLPIDTYKKEIDELTQEPLHYDWEQLRQDILQFGLRNSTLTALMPSET
                     SSQISNATNGIEPPRGYISVKASKDGILKQVVPEYERLKAYYELLWDIPNMDGYLHLV
                     GIMQKFVDQAISANTNYDPNRFAEAKVPMKVLLKDLLTAYKYGLKTLYYQNTRDGAED
                     VQDDLDEGCAGGACKI"
BASE COUNT         1574 a         1058 c          925 g         1491 t
ORIGIN      
        1 ataccactat tatgcaacgc atttcaggtg caaaacagat agattcactc acggttaaaa
       61 ttaaagatga tattgaaagc caaactgccg aaaaaagcat tgccgaattg ttagtagcta
      121 aacacggcaa aaaagatttc tttattatga atagtgatac gatcaaacaa accattacca
      181 gtaccaccaa tacaatgact ttgctgatct cctctatcgc ccttatttcg ctgattgtcg
      241 gtggtatcgg ggtaatgaat attatgctcg tttccgtcac cgaacgcacc cgagaaattg
      301 gtgtccgaat ggcgattggc gcaaaacaac gcaatatttt gcaacaattt ttaattgagg
      361 cggtggttat ttgcctaata ggtggtgtga ttggcatttt actggcaagc gctattattt
      421 gggcatttaa taccttaggt acgaatttta aaatgatgct ttcaccggaa tcggtgatta
      481 ttgccgtgct ctgctctaca cttatcggtg tggtatttgg ctacattccg gcaagaaacg
      541 ccgcccaatt aaacccaatt actgctctgg cacaagagta aatgcgataa ctatctgcta
      601 cactgtaggg gcaaaaaatt ttttgcccct acatccatta ttatgccaag tttaaggaga
      661 taaaatgaca ataaccaata ctgaactaga acaaattctg aacaccaaac tcaacagctc
      721 cgccattaac gactatgccc caaatggctt gcaagttgaa gggaaaagag agatcaaaaa
      781 aattattacc ggtgtgacag ctacacttcc cctgattgaa aaagcgattg agaaaaacgc
      841 cgatgcaatt ttagtccacc acggttattt ttggaaaagt gaaaacccgt gcattcgagg
      901 aatgaaaggt aaacgcatta aacagctttt agtgaatgac atcaatctct ttggttatca
      961 cctaccactg gatattcact ccgaactagg taacaacgcc cagcttgcta agcatttagg
     1021 agtaaaaaat ctacaaggtt tagaagacag acctaattca attccaatgt acggtgaatt
     1081 agaaaatccg atttccgcca atgaactgaa acaaaaactt gaaaaaacgt tacaacgcac
     1141 cgttatttta tgtgatgaat ttgttcatag cccacaaaaa atgattaaaa caatagggat
     1201 ttgctccggc ggaggacaag gctatattga tttagccttt gaaaaaggct gtgatgcctt
     1261 tattagtggc gaaatttccg aacagaccac tcactctgcc cgtgaacaag gaatctatta
     1321 ttttgcttgc ggtcatcacg ccacggaacg agatggcgta aaagccttag gtgaatggtt
     1381 agccgttgaa tatggtttag atgttgaatt tattgatatt gataaccctg cataaaaaat
     1441 acaagcggtt gaatttcctg aaaattttgc aatttgcaaa aaatcactaa aaatcaaccg
     1501 cttgtatatc atagtctaaa gttcaaaatc gccaaaatca cggctatcta ctttagcatc
     1561 aatctggcca accaaataag aactgacttc cacttcttgt ggtgctacct gtacattatc
     1621 ggaaaccaac cacgcattga tccacggaat ggggttggaa cgtgccttaa atggtaatgg
     1681 tagtccaaca gcctgcatcc gaatattagt gatatattca atatattgca ccaaaatatc
     1741 ccgatttagc cctatcatcg aaccgtcttt aaacaggtat tccgcccacg ctttttcttg
     1801 ttcagctgca cttaaaaaaa gctcgtaggc ctcttggcga cattcacgtg caatttctgc
     1861 catttcagga tcatcattgc cataggccat aatattcaat atatgctgag tgccggtaag
     1921 atgtaatgct tcatcacgtg caataaattt gatgattttg gcatttcctt ccataagctg
     1981 ccgttccgca aaggcaaatg agcaagcaaa agagacataa aaacgaattg cttcaagcgc
     2041 attcacactc atcatacaga gataaagttg tctttttaga ctacgcaaac tgacctcaca
     2101 ggtttttcca tcaacctgat aactgccttc accatacaaa ctatagagtt ggctgtcacg
     2161 aatcaaatca tcataatagg cggaaatatc tttggcacgc ttaataattt cttcgtttgt
     2221 gacaatatca tcaaatacta ttgatggatc attgacaata ttacggatga tatgtgtgta
     2281 agaacgactg tgaattgttt cgctaaatgt ccaagtttca atccaggttt caagctcggg
     2341 gatagacact aatggcaaaa gcgccacatt cgggctacgc ccttgaatgg aatccaacaa
     2401 ggtttggtat tttaaattgc tgataaaaat gtgcttttca tgttcaggca gttgggcata
     2461 gtcaatgcgg tcttgtgaca catccacttc ttccggtcgc cagaaaaatg agagttgttt
     2521 ttcaatcagt ttttcaaaaa tttcgtattt ttgttgatca taacgcgcca cattcacatt
     2581 ttgtccaaaa aacatgggtt cttttagttg atcattttta tgttgtgaaa acgtagtata
     2641 tgccatgtta ttctccttta tttctgttct tattaaattt tacaagcacc accagcacag
     2701 ccttcatcta agtcgtcttg cacatcttct gctccatcac gggtattttg atagtaaagg
     2761 gtttttaacc cgtatttata cgccgttaat agatctttta ataatacttt catcggtact
     2821 ttagcttctg caaagcggtt tgggtcgtaa tttgtattcg ccgaaatcgc ttggtcaaca
     2881 aatttctgca taatcccaac caaatgcaaa tatccgtcca tattaggaat atcccaaagc
     2941 agttcatagt atgcttttaa acgttcatac tccggcacaa cctgctttaa aataccgtct
     3001 tttgatgctt taacactaat atagccacgc ggaggttcaa ttccattggt ggcattcgaa
     3061 atttgcgacg aagtctccga tggcattaag gcagttaaag tggaattgcg caagccaaat
     3121 tgcagaatat cctgacgtag ttgttcccaa tcataatgaa gcggttcttg agttaattca
     3181 tcaatttctt ttttataagt atcgataggg agtaaccctt tggcataagt ggtttgatca
     3241 aaataagcac acgccccttg ttctttggct aaattcatcg atgcttttaa taaataatac
     3301 tgaatcgctt caaaggtacg gtgagttaaa ttattagcac tgccatcgga ataacgcact
     3361 tggtttttag ctaaatagta agcatagtta atcacgccta cacctaatgc gcgacgattt
     3421 aatgagctgt tacgtgcagc taataccgga taatcttgat aatctaatag ggcatctagc
     3481 gcacgaacca ctaaatcagc caattcttct aactcatcta aattgctgag tgtgcctaaa
     3541 ttaaatgccg ataatgtaca taatgcgatt tccccttgtt catcataaaa atgtgccagt
     3601 ggcttagttg gcaaagcaat ttctaagcag aggttcgatt ggcgtatcgg tgcgacacga
     3661 ggattaaatg ggctatgagt attacaatga tcgacattct gaatataaat tcgccctgtt
     3721 gaagcccgct cttgcatcag taatgaaaac aattctacag ctttaacttt acgttgccga
     3781 atgctcggat cttgctcata ttgcaaataa agttgctcaa atttagcttg atcagcaaaa
     3841 aacgcttcat ataaccccgg cacatctgat ggactaaata aactaatctc accgccttta
     3901 attaaacgtt gatacatcat tttattaatc tgtaccccgt aatccatatg gcgagcacgg
     3961 ttttcttcca caccacggtt attttttaat accattaagc tttctgcttc caaatgccaa
     4021 atcggaaaat acacggtagc cgctccaccg cgaacaccac cttgagagca agactttact
     4081 gcagtttgaa aatgtttata aaagggaata cagccggtat gaaatgcttc tccaccacga
     4141 atggggctac ctaatgcccg aattgcgccg gcattaatac cgatcccagc acgctgtgaa
     4201 acatatttaa cgattgcagc cgaggttgca ttgatggaat ctaagctatc atcacactca
     4261 attaacacac aggaactaaa ttgacgagta ggtgtacgca ctcctgccat aatcggtgtt
     4321 ggcaaagaaa ttttgaaagt ggaagtcgca tcataaaaac ggcgaatata atctaagcgg
     4381 cttgctgttg gatacttaga aaataaacag gcagctacga gtaaatacaa aaattgagcc
     4441 gattcataaa tctctccgct aacacgattc tgcactaaat attttccttc caactgcttt
     4501 actgctgcat aggaaaacgt catatcccgc cagtgatcaa taaatccatt cattgtctcc
     4561 cattcttcgg gcgtatagtc gctcagcaag tctgcatcat atttacctag cgcaactaat
     4621 tttttaacgt gctcatataa atgcggtggc tcaaattgtc cataagcttt tttgcgtaag
     4681 tggaaaatcg ccaagcgtgc ggctaaatat tgataatctg gcgtatcctt agtgattaga
     4741 tcagctgcag ccttgataat agtttcatga atatctgaag tgcgaatacc ttcataaaat
     4801 tgaatgtgag aacggagttc tacttgtgaa acagaaacat tctctaaccc ttctgccgcc
     4861 caagtaatca cacgatgaat tttatctaga ttgagttgct cgcgcgtgcc attacgcttt
     4921 gttaccatta aacttttatt cataattatt aaccctttat aaaatacctt agtaaaacac
     4981 tacatcttgt gtttttcatt aaagtaaaca caagatagtg tgcttaaagc aaaacatcaa
     5041 ccaataaa
//
LOCUS       DANMCL010000124         4834 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.127, whole genome shotgun sequence.
ACCESSION   DANMCL010000124 DANMCL010000000
VERSION     DANMCL010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4834)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4834)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4834
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.127"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(40..606)
                     /locus_tag="PXF40_002517"
     CDS             complement(40..606)
                     /locus_tag="PXF40_002517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803793.1"
                     /translation="MEGLIMGLQLIPHFPELAISRRTYLHDMPMYCFVSKNWIFSAKD
                     RAKREALGNLLACGGEMMKSFIFKRSLFSEIWFEDILLEDEEKELIRILYNKPEPEYQ
                     VEEKIDWEAREARRKQADYDKWQSYDERNPFHYQIFPTDTIAYAQQQVEKFIEDVDNF
                     LEWFYDDEVKRYILERNEIYQKKFDLVN"
     gene            complement(1139..1465)
                     /locus_tag="PXF40_002518"
     CDS             complement(1139..1465)
                     /locus_tag="PXF40_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803794.1"
                     /translation="MLHSKGKILPKITLNEIETKERFAIALRKEMHAQYWTGKMVANA
                     LDVSEKTVKDWVAGKRLPSSLDLLALMRISSCVRQLVWDISKSEECYQDAEMLKQICF
                     VLLSNL"
     gene            1513..3144
                     /locus_tag="PXF40_002519"
     CDS             1513..3144
                     /locus_tag="PXF40_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HDL5803795.1"
                     /translation="MVTRTKNQPKNQAVSYIRMSTEHQEFSPDLQRCFIENYAKENGL
                     EIIREYIDEGKSGLTAEHRPQFLSMIQLVQSGQADFDHILVYDVSRWGRFMNIDESGH
                     YELICTYQGIKVHYCAEPFKGNDIASQIYKTMKRLSVGDYCRELGVKVFNGQKNLIQH
                     GFRQGGVAGFGLRRRLIDCQGNPKFDLQRGDRKSLQTDRVILVAGPKEEQEIVRQIYH
                     DFVYQHKTEQQIADSLNAQGIVTDRNTAWTKGVVHQILINEKYVGHNVWNKRSASKTR
                     EYKGKNPVEEWVRAENVFEAIVPQALFNAAQTIIHQRSARLSDDEMLEQLKLLLKEKG
                     KLSGLIIDEAENCPSSSAYSSRFGSLLNTYTLINYEPERDYHYVEINRLLRQQHKNFV
                     QQTLDTIIELGGVVLSDDVTDLVHINNEFTASIVLSRCRLTPSGSKRWLIRFDTSLNP
                     DITIAVRINESATEILDYYLLPTTEKVNEKLRLAESNPAELEIYRHDNLDRFFIMVER
                     ILVKEFIYAKRHHSNSSYRQNSGTQSQNAQSESLC"
     gene            3059..3952
                     /locus_tag="PXF40_002520"
     CDS             3059..3952
                     /locus_tag="PXF40_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5803796.1"
                     /translation="MQNDTIQILPIDKIRVLNPRTRNQKVFADLVENIATIGLKRPIT
                     VTPSVDSAEYYDLLCGQGRLEACQVLGELFIPCRVVNANSEESYLISLVENIARRQHS
                     YMELLSGIKILNDRGYKPVDIARKIGFSKSHVNSILHLINAGEERLINAVEQGILPIT
                     IAISISRSDDQEVQKQLAELYTNGTLKSTDIAKIRNLIHRRNLAGKKANTGISGSIRS
                     SIYNPKTVVNIYKEETERQKMMIKQADYDEKQLSIILSCLNKLFEDKYFQLVLKSEHL
                     DDMPKDLSQRMLKQREGNIYA"
     gene            3945..4808
                     /locus_tag="PXF40_002521"
     CDS             3945..4808
                     /locus_tag="PXF40_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HDL5803797.1"
                     /translation="MPKHITYAFHNQLISLPIDEIIPLKKMDKNFEKSTKFQSILASI
                     REIGIVEPVVVYPEENNQYILLDGHSRVHALKKLGVDKVLCMISTDDEGFTYNKQINR
                     LTAVQENKMLMKTIERGVSDELIARTLNINLKALRQKMNMLNGITREVVDILANKQVS
                     KEIFRILRKMKPERQIEVAQMMIASNKFTLTYANMMLLSSRKEELVESHKSKTTNDDL
                     TDLSIMQKELERLKENYKISEEKLADLKMGLVVAKGYVKKLLNNAAVVDLLENDQSEI
                     YLTLKEVCDIQ"
BASE COUNT         1589 a          926 c          936 g         1383 t
ORIGIN      
        1 gtcggcaata acattatttt ataataacta atgtgaattc tagttcacta aatcgaattt
       61 cttttggtaa atctcattcc tttctaatat atagcgtttt acctcatcat cgtaaaacca
      121 ttcaagaaag ttatcaacat cttcaatgaa cttttctacc tgttgctgtg catatgctat
      181 cgtatcggta gggaagattt gataatgaaa cggattgcgt tcatcataac tctgccattt
      241 gtcataatcg gcttgtttac gccgcgcttc tcttgcctcc cagtcgattt tttcttccac
      301 ttgatattct ggctctggct tattatacaa aatacggatg agttcctttt cttcatcctc
      361 aagcagaata tcttcaaacc agatttcaga aaataggctg cgcttgaaaa tgaaagactt
      421 catcatttcc cctccacacg ccaataagtt tcccaatgct tcccgtttcg ctctatcttt
      481 tgccgaaaat atccagtttt tcgatacaaa acagtacatt ggcatgtcat gcaaataggt
      541 tcttcgtgaa atggctaatt caggaaaatg aggaataagc tgtaacccca ttattaagcc
      601 ttccatactg cacacgatct tacttaattg tccgtaatcg cgtaaaaaag caatgtcagt
      661 ttttatcaac cacaacgata ggctgactaa tatgaacata aagatgagat aatagatcgg
      721 ttttaaggct aaggcgcgcc gacaaagcca cattaagagt ggaatcgtaa cgagatcaaa
      781 gaaaaatgat gagtctatga tgatttcctt atgtgagttg atgaataatc aggcatgaag
      841 gaaaccttaa aaaggaaaag tcccttcatt accacttttt aaaacctttt aaggcttaaa
      901 aatcaaaagt cgtaatgaag ggactattgt ccgtgggcaa aaaggtatta gttatagggg
      961 gctttgtcaa gcgaaaattt actgtgcatt ttctcgccaa aactgattta agccttgata
     1021 aaatctcgaa agtaccttgt caagaaaaat ctttttagtg gtttgattgc tagttttttg
     1081 agcaaaacta tgctgtaatg cagtaaaaat acagtttcta tctgtgtttg gaatccagtt
     1141 acaaattgga gagtaataca aagcatattt gcttgagcat ctcagcatct tggtagcatt
     1201 cttctgattt tgaaatatcc caaacaagct gccgtacaca tgatgaaatt ctcattaacg
     1261 ccaataaatc taggctactt ggcaatcttt tccctgcaac ccaatcttta actgttttct
     1321 cactcacatc taatgcattg gcgaccattt tccccgtcca atattgagca tgcatttcct
     1381 ttcgtaacgc aattgcaaac cgctctttcg tttcaatctc attgagtgta attttgggta
     1441 agattttacc ctttgagtgc aacatatttc ctcccgattc ctttatattg gtgtagataa
     1501 ggagtcatta gaatggttac acgtacaaag aatcaaccta aaaatcaggc ggtttcctac
     1561 attcgaatgt caacggaaca ccaagaattt tcaccagacc ttcaacgttg ctttatcgaa
     1621 aattatgcta aagaaaatgg gctagaaatc attagagaat acattgatga aggaaaaagt
     1681 gggctaaccg cagaacaccg cccacaattc ctttcaatga tacaactcgt acaaagtgga
     1741 caagccgact tcgatcatat tttggtgtat gacgtgagtc gttggggtcg gtttatgaat
     1801 attgatgaat cggggcatta tgaactgatt tgtacctacc aaggcattaa agtccactat
     1861 tgcgccgagc cattcaaagg gaatgatatt gcctctcaaa tatataaaac catgaaacgt
     1921 ttgtcggtag gagactactg tcgtgaactc ggagtgaaag tatttaacgg tcaaaaaaat
     1981 ctgatccaac atggatttag acaaggtggg gtagctggat ttggattgcg taggagattg
     2041 attgactgtc aaggaaaccc taaatttgat ctccaacgtg gagatagaaa gagcctacaa
     2101 accgacagag tgattttggt tgcaggccca aaggaagagc aggaaattgt ccgacaaatt
     2161 taccatgatt ttgtttatca acataaaacg gaacaacaaa ttgctgatag cttaaatgca
     2221 caaggcattg ttactgatag aaatacagca tggacgaaag gcgtagtaca tcaaatcctt
     2281 attaacgaaa agtatgtcgg ccacaatgtt tggaataaac gtagtgcatc aaaaacacgc
     2341 gaatataaag gtaaaaaccc cgtagaagag tgggtgcgag ctgagaatgt atttgaagct
     2401 atcgtgccac aagccttatt taatgcagcc caaaccatta ttcatcaacg ctccgcccga
     2461 ttatctgacg atgaaatgtt agagcaactc aagctacttt tgaaagagaa agggaagctg
     2521 tctggcttga tcattgatga agccgaaaat tgtccatcaa gtagcgcgta cagtagccga
     2581 tttggaagcc tacttaacac atatacttta attaactatg aacccgaacg ggattaccac
     2641 tatgtagaga tcaaccgatt actccgtcag cagcataaaa atttcgtaca acaaacactt
     2701 gataccatta ttgaattggg gggagtggtt ttgagcgatg atgtaaccga tttagtccac
     2761 atcaataatg aatttaccgc ctcaatcgta ttaagtcgtt gtcgcctaac gccatcagga
     2821 agcaaaagat ggttgatccg atttgatacc agtttaaatc ccgacataac aattgcagtg
     2881 cgcatcaatg agagtgccac agaaattctt gattactacc tgcttcccac aactgaaaag
     2941 gtaaatgaaa aactacgatt ggctgagagt aatcctgccg aacttgaaat ctaccgccat
     3001 gataatttag atcgcttttt tattatggtt gaacgtattt tagtcaagga gtttatctat
     3061 gcaaaacgac accattcaaa ttcttcctat cgacaaaatt cgggtactca atcccagaac
     3121 gcgcaatcag aaagtctttg ctgatctggt cgaaaacatt gcaacgattg gtctcaagag
     3181 acctattacc gtaacgccat ctgtcgatag tgctgaatat tatgatttgt tatgcggtca
     3241 aggtcggctt gaggcttgtc aggtgcttgg tgagctattc ataccttgtc gcgttgtgaa
     3301 cgcaaatagt gaagaaagct acttgatcag ccttgtggaa aatattgcca gacgtcagca
     3361 ttcctatatg gagctgcttt caggcatcaa aatactcaat gatagaggtt ataagcccgt
     3421 tgatattgct cgcaaaatcg gtttctcaaa aagccatgtc aacagtatct tacacctcat
     3481 caatgctggg gaagagcgcc ttatcaatgc ggtagagcaa ggaattttac ccattaccat
     3541 cgctatttcg atttctcgtt cagacgatca ggaagttcaa aaacaactcg cggaacttta
     3601 caccaatggt acattgaaaa gcaccgatat tgccaaaata cgtaacctga tccaccgtag
     3661 aaatcttgct ggtaagaaag ccaatacagg tatttctgga agtattagat catctattta
     3721 taatcccaaa actgtggtga atatctacaa agaggaaacg gaaagacaga aaatgatgat
     3781 caagcaagcg gactatgatg aaaaacaact ctctattatc ttgtcttgct taaataaact
     3841 ctttgaggac aaatactttc aactcgtcct taaatcagaa catttagacg atatgccaaa
     3901 agatttaagc caacgaatgt taaaacaacg agagggaaat atttatgcct aaacatatta
     3961 cttatgcctt tcataatcag ttaatttcgc ttccaattga tgagattatt ccattaaaaa
     4021 agatggataa aaattttgag aaaagcacta agttccaaag cattctggct tcaattcgtg
     4081 aaatcgggat tgttgaacct gtggtcgtct atccagaaga aaacaaccaa tatattttgt
     4141 tagatggcca ttctcgtgta catgcactca aaaagctagg tgtggataag gtgctttgta
     4201 tgatttctac cgatgatgaa ggctttactt acaacaagca aattaaccgc ttaaccgccg
     4261 ttcaggaaaa taaaatgctg atgaaaacca ttgagcgcgg ggtttcggat gaactgatcg
     4321 caagaacact caatatcaat ctaaaagcac tacggcagaa aatgaatatg cttaatggga
     4381 tcacaagaga ggttgttgat atattggcca ataagcaggt cagtaaagag atatttcgga
     4441 ttttgcgcaa gatgaagcct gaacgccaaa ttgaagtggc acaaatgatg atcgccagta
     4501 ataagtttac attgacatac gccaatatga tgttgctcag ttcacgcaag gaggaattag
     4561 tcgaaagcca caagtctaaa accacgaatg atgatttaac cgatctttcc attatgcaaa
     4621 aagagctaga gcgacttaaa gagaactata aaatttccga agagaaattg gcggacttaa
     4681 aaatgggatt ggttgtggcg aaagggtatg tcaaaaaact attgaataat gctgccgtgg
     4741 tagatttgct tgaaaatgat cagagtgaaa tctatcttac tcttaaagaa gtatgtgata
     4801 ttcaataata taatatctag ctaataacct taat
//
LOCUS       DANMCL010000125         4645 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.128, whole genome shotgun sequence.
ACCESSION   DANMCL010000125 DANMCL010000000
VERSION     DANMCL010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4645
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.128"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            26..355
                     /gene="trxA"
                     /locus_tag="PXF40_002522"
     CDS             26..355
                     /gene="trxA"
                     /locus_tag="PXF40_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018357021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HDL5803798.1"
                     /translation="MSNVIHTTDATFEQDVLKSDVPVLLDFWAPWCGPCRMIGPVLDD
                     LSVDAQFDGKVKIVKMNVDENPSVPAQFGVRSIPFLLLFKNGEVIAQQVGAIPHAQMA
                     EFIKQAL"
     gene            526..1749
                     /gene="hflK"
                     /locus_tag="PXF40_002523"
     CDS             526..1749
                     /gene="hflK"
                     /locus_tag="PXF40_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HDL5803799.1"
                     /translation="MSWNESGNQQDPWGKPGQKKAEPKPEQQEQGSQQEPTNNQRNEQ
                     QPPDLEEVFSSLLKKMGGGKGPNNSSNQPSASLGKFLPVVLGLAAVVWVGSGFYTVQE
                     AERGVVTRLGKLNDIVLPGLNWKPTFIDSVTRVNVERVSELNTSGSMLTQDENMVQVE
                     MTVQYRVEDPAKYLFSVSNPDDSLKQATDSALRYVIGHMTMDEILTTGRATVRERTWS
                     TLRDIIKTYDMGLLVTDVNFQYARPPEEVKAAFDDAIKAQEDEQRLIREAEAYARGEE
                     PIARGQAQRTIEQAQAYKEAVVLNAKGEVERLSQLLPEYKASPELTRERLYIQTMEKV
                     MKNTPKVVMDSSGNNLNVLPFDKLMNSSSVIKAEQPAAAQVVTPQVVQPQVQPRTQIQ
                     PQQAEQQEPTRKGRF"
     gene            1752..2639
                     /gene="hflC"
                     /locus_tag="PXF40_002524"
     CDS             1752..2639
                     /gene="hflC"
                     /locus_tag="PXF40_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HDL5803800.1"
                     /translation="MRRLLVPILAVVAFVVLQAITIVNEGERGIMLRFNKVHRDSDQK
                     VVVYEPGIHFKVPFIDSLKVLDARIQTLDGQEDRFVTVEKKDLLVDSYVKWRISDFGQ
                     FYTSTGGDYQKAADLLRRKVGDRLRSEIGSRTIKDIVSGSRGELMAGAQKALNAGEDG
                     AERLGIEVVDVRVKQINLPNEVSSSIYQRMRAERDAVAREHRSQGNEKAEVIRAEVDK
                     KVVLILANANKTAQALRGEGDAQAAKLYSEKFGNEPEFYSFIRSLKAYEDSFAEGQNN
                     MMLLKPNSEFLRFMQAPTK"
     gene            2813..4111
                     /gene="purA"
                     /locus_tag="PXF40_002525"
     CDS             2813..4111
                     /gene="purA"
                     /locus_tag="PXF40_002525"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010869263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HDL5803801.1"
                     /translation="MGKSVAILGAQWGDEGKGKIVDLLTDRVKYVVRYQGGHNAGHTL
                     IINGEKTVLRLIPSGILRDNVTCLIGNGVVLSPEALMKEMGELEERGINVRERLKISE
                     ACPLILPYHVAMDHAREAALGKNKIGTTGRGIGPAYEDKVARRGLRVSDLFDKEHFAA
                     KLKDILDYYNFQLVNYYKVEAVDYQKTLDDVFAIADVITGMVADVTTLLHEARENGDN
                     ILFEGAQGTMLDIDHGTYPFVTSSNTTAGGVATGSGYGPRHLDYVLGIIKAYCTRVGS
                     GPFTTELFDDVGAEIARKGNEFGAVTGRPRRCGWFDAVAVRRAVQINSISGFCMTKLD
                     VLDGFKELKICVAYKMPNGKIVEYAPLAAKDWEGVEPIYETMPGWSENTFRVTKREDL
                     PQAALDYIKRIEELVGVPVDILSTGPDRVETMILRDPFAA"
     gene            complement(4271..4341)
                     /locus_tag="PXF40_002526"
     tRNA            complement(4271..4341)
                     /locus_tag="PXF40_002526"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4311..4313),aa:Arg,seq:tct)
BASE COUNT         1431 a          831 c         1070 g         1313 t
ORIGIN      
        1 ttatttaata tttaaggata aacttatgag caatgtcatt catacaacag atgctacatt
       61 tgaacaagat gttttaaaat cagatgtacc ggtattatta gacttctggg cgccttggtg
      121 tggtccttgc cgtatgatcg gccccgtact tgacgattta tctgttgatg cacaatttga
      181 tggtaaagta aaaattgtca aaatgaacgt agatgaaaat ccatctgtac cagcacaatt
      241 tggcgtacgc agcattccat ttttactatt attcaaaaat ggtgaagtga ttgcccagca
      301 agttggtgca attccgcacg cccaaatggc tgaatttatc aaacaagcat tataatttta
      361 agagcaatac tagggcgaat ttatcgccct atttttttgc aaataaatag tgaaaaaaga
      421 ccgcttgttt cagataaacc tagtcaaaag cttactaaat aggtacaatc actaacttgc
      481 attctaagct ttaaagtgcg attcgatttt attttggaga tatttatgtc gtggaatgaa
      541 tcaggcaatc agcaagatcc ttggggtaaa ccggggcaga aaaaagctga gccaaagcct
      601 gagcaacaag aacagggttc acaacaagag ccgaccaata atcaaagaaa tgaacaacag
      661 ccccctgatt tagaagaagt atttagcagt ttattaaaaa aaatgggggg tggaaaaggg
      721 cctaataata gttcaaatca acctagtgca agcttaggga aatttctacc tgtggtttta
      781 ggtcttgcag cagtagtttg ggttggctca ggtttttaca ctgtgcaaga ggctgaacgt
      841 ggtgtggtta ctcgtttagg taagctgaat gatatcgtgt tgccagggtt gaattggaaa
      901 ccgactttta ttgattcggt tacaagagta aacgtagaac gtgtttcaga gctgaacacc
      961 agtggctcaa tgctgactca agatgaaaat atggtgcagg tagaaatgac ggttcagtat
     1021 cgtgtggaag acccggctaa atatctgttt agtgtgagca accctgatga cagcttaaaa
     1081 caagcaacag acagtgcctt gcgttatgtg attggtcata tgacgatgga tgaaatttta
     1141 accacagggc gtgcaaccgt gcgtgaaaga acgtggtcga cattgcgtga tattatcaaa
     1201 acctatgata tgggtttatt ggtaacagac gtaaacttcc aatatgcacg accgcctgaa
     1261 gaggtgaaag ccgcctttga tgatgcaatc aaagcacaag aagatgagca acgcttaatt
     1321 cgtgaagcgg aagcctatgc aagaggtgaa gagccgattg cacgtggcca ggcacagcgt
     1381 acgattgagc aagctcaagc ttacaaagaa gcagttgtgt taaatgcgaa aggggaagtg
     1441 gagcgtttga gtcaattatt acctgaatat aaagcctctc cagagctgac tcgtgaacgt
     1501 ttatatatcc agacaatgga aaaagtcatg aaaaatacgc cgaaagtggt gatggattca
     1561 agtggtaata atttgaatgt attgcctttc gataagctaa tgaattcttc atcggtaata
     1621 aaagcggagc agcctgcggc ggcacaagta gttacaccac aagttgttca gccgcaagta
     1681 cagccaagaa cacaaattca gccgcaacaa gcagaacaac aagaaccaac tcgtaagggg
     1741 agattttaat catgcgtaga ttattagtac ctatacttgc tgtagttgct tttgttgtgc
     1801 tacaggcaat caccattgta aacgagggcg agcgtggcat tatgttacgt tttaacaaag
     1861 ttcatcgtga tagcgatcaa aaagtggtgg tatatgaacc ggggattcac tttaaagtac
     1921 catttatcga tagtttaaag gtattagatg ctcgtattca aactctagat gggcaagaag
     1981 accgttttgt aacagtcgag aaaaaagatt tattagtgga ctcctatgta aaatggcgaa
     2041 tcagtgattt tggccaattt tatacctcta ctggggggga ttaccaaaaa gcggcggatt
     2101 tattacgccg taaggtaggg gatcgtctgc gttccgagat tggttctcga accattaaag
     2161 atattgtatc cggctctcgt ggtgagttaa tggcaggagc ccaaaaagcg ctgaatgccg
     2221 gtgaagatgg agcagagcgt ttaggaattg aagtggttga tgtgcgagtg aagcaaatca
     2281 acttaccaaa tgaagtttct tcttcaattt accaacgtat gcgtgccgag cgtgatgcgg
     2341 ttgctcgtga acaccgctca caaggtaatg agaaagcaga ggtaattcgt gccgaagtgg
     2401 ataaaaaagt ggtgctgatt ttggcaaatg cgaacaaaac tgcccaagcc ttgcgaggtg
     2461 aaggtgacgc tcaagctgca aaactctatt cagagaaatt tggtaacgag ccggaatttt
     2521 acagttttat tcgtagttta aaagcctatg aagatagctt tgccgaaggt caaaataata
     2581 tgatgttatt aaagccaaac agcgaattct tacgctttat gcaagcaccg acaaaataat
     2641 tgtatctata aaacccgatc ttgtatcggg tttttaattt tcatccctat tctgatcata
     2701 acaagcggta aattttggct gattttttgc aaaaaatttg aaaaaattga ccgcttgcga
     2761 tatgaagtta taatgggttt cgttattcat cctaactaaa agaggcattt ctatgggtaa
     2821 aagtgttgct attcttggcg ctcagtgggg cgatgaggga aaaggcaaaa ttgttgattt
     2881 attaacagat cgtgtgaaat atgtagtacg ttatcaaggt ggacataatg cagggcatac
     2941 cttaatcatt aatggtgaaa aaaccgttct gcgtttaatt ccatcgggta ttttgcgtga
     3001 taacgtgact tgtttaatcg gtaatggtgt agtgctttct ccagaggcat taatgaaaga
     3061 gatgggggag ctagaagaac gaggcattaa tgtgcgtgag cgtttaaaaa tttctgaagc
     3121 ttgcccgtta attctgcctt atcacgttgc gatggatcac gctcgagaag cggcacttgg
     3181 taaaaacaaa attggtacaa caggacgtgg tattggccca gcttatgaag ataaagtcgc
     3241 tcgccgtggt ttacgtgtca gcgatttatt cgacaaagaa cattttgccg caaaattaaa
     3301 agatatttta gattactaca acttccaatt agtcaattat tacaaagttg aagcggtaga
     3361 ttatcaaaaa accttagatg atgtgtttgc gattgcggat gtgattaccg gaatggttgc
     3421 cgatgtgaca actttacttc acgaagcacg tgaaaacggc gacaatattt tatttgaagg
     3481 ggctcaaggc acgatgttag atatcgacca cggtacttac ccgttcgtaa ccagctcgaa
     3541 tacgacagca ggcggtgtgg caaccggatc aggctacggt cctcgtcatt tagattatgt
     3601 attagggatt atcaaagcct actgtacccg tgtaggtagt ggaccgttca ccaccgaact
     3661 atttgacgat gtaggtgctg aaattgctcg caaaggtaat gagttcggag cggtaaccgg
     3721 tcgccctcgc cgttgtggct ggtttgatgc cgtagccgtt cgccgagcag tgcaaatcaa
     3781 ctccatttca ggcttctgta tgactaaact cgatgtttta gacggattca aagagctaaa
     3841 aatctgcgtt gcctacaaaa tgccaaacgg aaaaattgtc gaatatgccc ctcttgcagc
     3901 aaaagactgg gaaggtgttg aaccaattta tgaaacaatg ccgggttggt ctgaaaatac
     3961 tttccgtgtg acaaaacgtg aagatttacc acaagccgca ttagattaca ttaaacgtat
     4021 cgaagagctg gtcggtgtgc cggtagatat tctttctaca ggtccggatc gtgtcgaaac
     4081 gatgattttg cgtgatcctt ttgcagctta ataaaagata aaataaagcc atttagtgag
     4141 atagagctag atggcttttt tgtttgaacc agtaaacttt actttggcac aattttgtca
     4201 caatacagaa aatagttctt tagcgtgagt ttttgaggct gtgtaagtat ttgaatttaa
     4261 aagaatttaa tggcacgccc taaaggattc gaacctttga cccacgcctt agaagggcga
     4321 taggtatttt ataaaaggcg tttattttaa ctaataaaaa caaagactta tagagataac
     4381 ccctctatat tacctaccat tatttcacat ctttttacat taaataacac catttacggt
     4441 acatttatgg aacacgttgg tgatgagcta gtcttcaaaa gttactaaat taaactacaa
     4501 tctgccccgt ctcttttaag tacttataga tacgccctaa cataatctgc gttggcgttt
     4561 tgccaatatc ctcttttgtt agcggtgcat cagtaatctc cttggcggac tgtgcatcaa
     4621 tgtatttgta ctcacttgtg atgat
//
LOCUS       DANMCL010000126         4595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.129, whole genome shotgun sequence.
ACCESSION   DANMCL010000126 DANMCL010000000
VERSION     DANMCL010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.129"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(189..1328)
                     /gene="dnaJ"
                     /locus_tag="PXF40_002527"
     CDS             complement(189..1328)
                     /gene="dnaJ"
                     /locus_tag="PXF40_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015939959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HDL5803802.1"
                     /translation="MAKKDYYEVLGLSKGASEKDIKRAYKRLAAKHHPDKNQGSKESE
                     EKFKEITEAYDVLTDSEKKAMYDQYGHAAFEQGGAGAGGFGGFGGGGFGGFEDIFSEM
                     FGGGFGGGGRRQRVVRGDDLRYDIEITLEEAVKGCKKDIRIQTLAECDTCHGTGAEAG
                     SKVETCSHCHGSGRVRRQQGFFVTEAVCPSCHGTGKRIEKPCRSCHGDGRVQKAKNLS
                     VTIPAGVDTGNQLRLSREGAAGENGAPAGDLYVVIHVKEHDIFERDGSNLYCEVPISF
                     TLAALGGEIEVPTLDGKLKLKIPAETQTGKLFRVRGKGVTSPRGGYAGDLICKVVVET
                     PVNLTEEQKALLRQFEESLEGQGKHRPKHEGFFDGVKKFFDNLGK"
     gene            complement(1551..1853)
                     /locus_tag="PXF40_002528"
     CDS             complement(1551..1853)
                     /locus_tag="PXF40_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803803.1"
                     /translation="MLKLYPTTENVQPPFYKIYDHKSGETVIATETENSNTAILMDDF
                     VWFEQIPTTEALLADTWSVIENRSKQGLLKRAYTKDFEKHLADGKVEIYIAVNPHC"
     gene            complement(1995..3893)
                     /gene="dnaK"
                     /locus_tag="PXF40_002529"
     CDS             complement(1995..3893)
                     /gene="dnaK"
                     /locus_tag="PXF40_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005670448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HDL5803804.1"
                     /translation="MGKIIGIDLGTTNSCVAVMDGDKPRVIENAEGARTTPSIIAYTD
                     KETLVGQPAKRQAITNPKNTLFAIKRLIGRRFTDAEVQRDIEIMPFEISKADNGDAWV
                     TVKGDKLAPPQISAEILKKMKKTAEDFLGEPVTEAVITVPAYFNDAQRQATKDAGRIA
                     GLDVKRIINEPTAAALAYGLDSKKENQTIAVYDLGGGTFDISIIEIDNFDGEQTFEVR
                     ATNGDTHLGGEDFDNRVINYLVEEFQKEQGVDLRNDPMAMQRVKEAAEKAKIELSSAQ
                     ETEVNLPYITADATGPKHLNIKVTRAKLESLVEDLVNRSLEPLKTALADAGLSVGDIN
                     DVILVGGQTRMPLVQKKVADFFGKEPRKDVNPDEAVAIGAAVQGGVLSGSVTDVLLLD
                     VTPLSLGIETMGGVMTTLIEKNTTIPTKKSQVFSTAEDNQSAVTIHVLQGERKRAADN
                     KSLGQFNLEGINPAPRGMPQIEVTFDIDANGIINVSAKDKNTGKEQQIKIQASSGLSD
                     AEVEQMVRDAEANAEADKKFEELVQARNQADGIAHATRKQITEAGDALNADDKAKIEA
                     AISELETAAKGEDKAEIEAKIEALIKASEPLMQAAQAKAQGGEQPQQSQKDDGVVDAE
                     FEEVKDNK"
     gene            4152..4490
                     /locus_tag="PXF40_002530"
     CDS             4152..4490
                     /locus_tag="PXF40_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HDL5803805.1"
                     /translation="MKLITTIIQPSKLDQVQDALSEIGIQGMTITEVKGFGRQYGHTE
                     QELSQMSRIDFRPKIKVEILVSNYQTDEVIDAILNASYSGQVGDGKIYVANIEQVIRT
                     RTGETDDEAV"
BASE COUNT         1182 a         1038 c          911 g         1464 t
ORIGIN      
        1 gactattaaa tattaatttt aaatagttga ttttaattgt caagtattct gagaaagatg
       61 ataagcggtc atttttccac tattttttgc agtatgtagg tgtaaaaatt aacggccgag
      121 aagtagattt caacaaagaa tagataataa aaaagtacat atttaagaaa tatgtacttt
      181 ttatgatttt atttgcctaa gttatcaaag aatttcttca caccatcaaa gaaaccttcg
      241 tgtttcggac gatgtttacc ttgtccttct aaactctctt caaattgtcg taatagtgct
      301 ttctgttctt cggttaaatt cacaggcgtt tcgaccacca ctttgcagat taaatcccct
      361 gcgtagccac cacgagggct tgttacccct ttgcctcgta cacggaatag tttaccggtt
      421 tgagtttctg ccggaatttt gagttttaat ttgccgtcta aagttggcac ttcaatttca
      481 ccgcctaaag ctgcaagggt aaagctaatc ggcacttcac agtataaatt cgaaccgtca
      541 cgctcaaaaa tatcgtgttc tttaacgtga atcaccacat ataaatcgcc tgccggtgcg
      601 ccattttcgc ctgcagctcc ctctctcgat aagcgaagtt gattaccggt atccacacct
      661 gccggaatgg taacagagag gtttttcgct ttctgtacac gtccatcgcc gtggcaagaa
      721 cggcacggtt tttcaatgcg tttacctgta ccgtgacaac ttggacaaac tgcctcagtc
      781 acaaagaaac cttgctgacg gcgaactctg ccggagccgt gacaatgcga acaggtttcc
      841 actttgctcc ctgcttccgc ccctgtacca tgacaagtat cacattcagc taaggtttga
      901 atgcgaatat cttttttaca gcctttcaca gcttcttcaa gggtgatctc gatgtcgtaa
      961 cgtaaatcat cgccacgtac cacacgttgg cgacgtccac cgccaccaaa gccaccgcca
     1021 aacatttcgc tgaagatgtc ttcaaaacca ccgaaaccac cgccgccaaa gccaccgaat
     1081 ccgcctgcac cggcaccgcc ttgttcaaag gcggcgtgac cgtattggtc gtacatcgct
     1141 tttttctcgc tgtcggtcag cacgtcatag gcttcggtaa tctctttaaa tttctcttcc
     1201 gactctttac tgccttggtt tttatccggg tgatgctttg ccgccaaacg tttatatgct
     1261 cgtttgatgt ctttctcgct tgccccttta gacagtccaa ggacttcgta ataatctttc
     1321 tttgccattg ttgttccgtt tgtaaatttt tctgtgtttt tgaccgcttg ccctcgcccc
     1381 ttgtgggaga ggggtaggat ggttaattcc ccctctctct gaaaaatatt tctgaacgaa
     1441 atatttttcg gtctctctcc cacaagggga gagagtttta tataattaaa tgggatctag
     1501 ccaagatggc tcaagatgac acaagcgtgg acgcttgcgc tatcaaaagc ctaacaatgc
     1561 ggattcaccg caatataaat ttctactttg ccgtctgcta aatgtttttc aaaatctttg
     1621 gtgtaagctc gtttgagcaa accttgtttg gaacggtttt caatcacaga ccaagtgtct
     1681 gccaaaagag cttcggtagt tggaatttgc tcaaaccaaa caaaatcgtc cattaaaatc
     1741 gcggtattgc tgttttccgt ttctgtggca atgaccgttt cgccactttt atgatcgtat
     1801 attttataaa acggtggctg tacattttcc gttgtagggt agagttttag catttgtaaa
     1861 atttcctttg aaaagcaccg cttgcacagc cccaaagggg ctgaattatg tgtaacctag
     1921 cacggctcgt gctaggtggt atatatctac acaaaagggg cgaaagatat ttcgccccta
     1981 caagttacgc aagattattt attatctttc acttcttcaa attccgcatc gaccacgccg
     2041 tcatcttttt gagattgttg tggttgctcg ccgccttgtg cttttgcttg tgctgcttgc
     2101 attaacggtt ctgaagcttt gattaacgct tcgattttcg cttcgatctc ggctttatct
     2161 tcgcctttag ctgcggtttc taactcagaa atagccgctt cgatcttcgc tttatcgtct
     2221 gcgtttaacg catcgcctgc ttcggtaatt tgcttacggg ttgcgtgagc aataccgtct
     2281 gcttggttac gagcttgaac taactcttca aattttttgt ctgcttccgc attcgcttct
     2341 gcatcacgca ccatttgttc aacttcagca tcgcttaagc ctgaagatgc ttgaattttg
     2401 atttgttgct ctttgccagt gtttttatct tttgcagaga cattgataat accgttagca
     2461 tcaatatcaa aggttacttc aatttgtggc ataccgcgtg gagcagggtt aataccttca
     2521 aggttgaatt gacctaaaga tttattatcc gctgcacgtt tacgctcacc ttgtaacacg
     2581 tggatagtta ccgcagattg gttatcttcc gctgttgaga acacttgtga tttcttggtt
     2641 ggaatcgtag tgtttttctc aattaaggta gtcattacac cacccattgt ttcgatacca
     2701 agtgaaagcg gagtaacgtc taataacaat acgtctgtta ccgaaccact taacacaccg
     2761 ccttgaaccg ccgcaccgat tgccacagct tcgtccgggt taacgtcttt acgcggttct
     2821 ttgccaaaga agtctgccac ttttttctgt actaacggca tacgggtttg accaccgact
     2881 aaaatcacat cgttgatgtc gcctactgat aaaccggcat cagctaaagc ggtttttaac
     2941 ggctctaacg aacggtttac taaatcttca actaaagatt ccaatttcgc acgggttact
     3001 ttaatgttta agtgtttcgg gccggttgca tctgccgtga tgtatggaag gttcacttca
     3061 gtttcttgtg cagaagaaag ttcgattttc gctttttccg ctgcttcttt cacacgttgc
     3121 attgccattg ggtcgttgcg taaatcaacg ccttgttctt tttggaattc ttccactaag
     3181 tagttgatta cacggttatc gaagtcttca ccacctaggt gagtatcgcc gttggttgca
     3241 cgcacttcaa aagtttgctc gccgtcaaag ttatcaattt cgataatcga aatatcgaat
     3301 gtaccaccac ctaagtcgta aacagcaatc gtttggttct ctttcttaga atctaaacca
     3361 taagcaagcg ctgccgctgt tggttcgttg atgatacgtt ttacatctaa acctgcaata
     3421 cgaccggcat ctttagttgc ctgacgttgt gcatcgttaa agtatgcagg cacagtaata
     3481 accgcttcgg ttaccggttc gcccaagaaa tcttctgcgg ttttcttcat ttttttcaag
     3541 atttcagcag agatttgcgg cggtgctaat ttatcgcctt ttacggttac ccacgcatcg
     3601 ccgttatctg ctttgctgat ttcaaacggc ataatttcaa tatcacgttg cacttcagca
     3661 tcagtaaaac gacggccgat taaacgcttg attgcaaata aagtattttt cgggttagta
     3721 attgcctgac gttttgccgg ctgaccaact aaggtttctt tatcggtgta agcgatgata
     3781 gatggcgttg ttcttgcccc ttccgcattt tcaattacac gaggtttgtc gccgtccatt
     3841 accgcaacac aagaatttgt tgtacctaag tcaataccaa tgattttacc catttttatg
     3901 attcctataa taataaattc agtttgaata agaaacggga ttgcatttcc cgttcagacg
     3961 aaatcataaa tagggacgaa aatgcactgt tcaagggcaa aaataaaaaa attgcaaaat
     4021 ttttggaaaa agtaaccgct tgtatgtggg ggagatttgg cagaatattt cacggagaaa
     4081 atacctccta ccttgcatac ccctcaatag ctttttatac ttacggcaac tcaaacagag
     4141 aaggatataa tatgaaactg attactacca ttatccaacc ttcaaaatta gaccaagtgc
     4201 aagatgcact ttcagaaatc ggtattcaag gaatgactat taccgaagta aaaggctttg
     4261 gacgccaata tgggcatacc gaacaagagc ttagccaaat gagccgcatt gactttcgtc
     4321 ctaaaattaa ggtggagata ttggtttcta attaccaaac cgatgaagtg atcgatgcca
     4381 ttctcaatgc atcctattct gggcaagtgg gtgatggcaa aatttatgta gcgaatattg
     4441 aacaagttat ccgcacccgt accggcgaaa ctgacgatga agcagtctag ccattgctag
     4501 cagagaagct ttttattatc gtgttttaga gttatatttt caaccttact aaagcaaatt
     4561 ttctaatttg gtgtgaatta aatgtttgtt ttttg
//
LOCUS       DANMCL010000127         4572 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.130, whole genome shotgun sequence.
ACCESSION   DANMCL010000127 DANMCL010000000
VERSION     DANMCL010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4572
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.130"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..657
                     /locus_tag="PXF40_002531"
     CDS             <1..657
                     /locus_tag="PXF40_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HDL5803806.1"
                     /translation="IMAHELGRENPLAYEDYSLINQKFLKFQWKSNYAYANWLETTAN
                     KIKRSKDDSIEWHRKNEKEIPFWVITETWDFGALSKFYSLLNGQHQRKIAKKFNVDEN
                     TLKNWLNEINIVRNLSAHHSRIWNRKFSDIAIPKLDDPRWSKFKKMQQYFSNLSLDDK
                     AKERIFGRVAILWFLVSQTSTNYHWLDKFEDLLNDFPNLPNTKVELMGFNREILEKIK
                     "
     gene            complement(721..1683)
                     /gene="hemH"
                     /locus_tag="PXF40_002532"
     CDS             complement(721..1683)
                     /gene="hemH"
                     /locus_tag="PXF40_002532"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HDL5803807.1"
                     /translation="MNQPQQIGILLANLGTPDEPTPSAVKRYLKQFLSDPRVIDLPKF
                     KWQAILNCIILPRRSPKVAKLYQSVWSEEGSPLLAISRQQQRAVQRYFDAKGKNVVVE
                     LGMSYGNPSIESATDNLIKQGVERIIVLPLYPQYSSTTTASVFDAFANGLKAQRKIVP
                     FDFIHSYHNDPLYIQALANSIDVKPDELLLFSFHGIPKRYETEGDFYAKHCQETAELV
                     AEKLGLPREKWYLSFQSRFGDEEWLQPYTDQTLESFPQKGIKKVAVVCPGFSADCLET
                     LEEITEENRENFEHAGGESYRYIPALNASGDHIKALVKLIEAKI"
     gene            1920..2054
                     /gene="rpmH"
                     /locus_tag="PXF40_002533"
     CDS             1920..2054
                     /gene="rpmH"
                     /locus_tag="PXF40_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HDL5803808.1"
                     /translation="MKRTFQPSVLKRARTHGFRARMATKNGRQVLARRRAKGRKSLSA
                     "
     gene            2090..2464
                     /gene="rnpA"
                     /locus_tag="PXF40_002534"
     CDS             2090..2464
                     /gene="rnpA"
                     /locus_tag="PXF40_002534"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HDL5803809.1"
                     /translation="MKKLNFSRELRLLAPVQFKAVFEEPLRASTPQMTLLARENNLEN
                     PRLGLTVAKKHLKRAHDRNRIKRIVRESFRLKQHELPNFDFVFVAKGGIGKLDNATLF
                     ETLEKLWSRHIRLSKKPAQQNP"
     gene            2413..2736
                     /gene="yidD"
                     /locus_tag="PXF40_002535"
     CDS             2413..2736
                     /gene="yidD"
                     /locus_tag="PXF40_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HDL5803810.1"
                     /translation="MVKTHSPEQKAGTTESINQPPRLSLLAKILLLPIYFYRYAISPL
                     IGPRCRFYPTCSTYAVEAIKIHGAIKGGYLAFKRILRCNPLSEGGEDPVPLCCKGNCK
                     HNDKK"
     gene            complement(2841..3182)
                     /gene="erpA"
                     /locus_tag="PXF40_002536"
     CDS             complement(2841..3182)
                     /gene="erpA"
                     /locus_tag="PXF40_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005706127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HDL5803811.1"
                     /translation="MSDIQIPLIFTDAAARKVKSLIEGEENPNLRLRVYITGGGCSGF
                     QYGFTFDDQVNEGDLTIENQSVGLVVDPMSLQYLIGGTVDYTEGLDGSRFVVNNPNAS
                     STCGCGSSFSI"
     gene            3331..4458
                     /locus_tag="PXF40_002537"
     CDS             3331..4458
                     /locus_tag="PXF40_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HDL5803812.1"
                     /translation="MADSVKSHEQSSDEIDLIEIFRALWDKKWWIVITTFITTLLAGI
                     YAFTAKEQWTSKATVIAPKLTELGEYLNVRREYSRILRVDPVDPNALSASLFNNFNRL
                     AQSQDTKNEFFITSNVYKTLAEGKDEQGQRTVLSNLSNENTSFIIPDAKKDPNAIGRT
                     LSFSAETPMEAQDTLGKLVQFINSKAFAVELEDFLVDFQNVLTALQYEKSLIQEDLSV
                     NKSVQLENLNKAYETAQKAGIKEYSKAFNQSDASNIAAALSDTKISLSDSKLADSSYL
                     FMLGEKYLKAQIDVANEKGVVYPPRYYQIDYQLKQLEPLFEKTKTVKTQTFSYQASPD
                     YPVIKDKPKKVIILLIGAFIGLMISCLSIILTHYLLASKFK"
BASE COUNT         1464 a          832 c          864 g         1412 t
ORIGIN      
        1 attatggctc atgaattggg gcgtgaaaat cctttggctt atgaagatta ttctctgatt
       61 aatcaaaagt tcttaaaatt tcaatggaaa tctaattatg cttatgcaaa ttggctagaa
      121 actacagcta ataaaattaa gcgtagtaaa gatgattcta ttgaatggca tagaaaaaat
      181 gagaaggaaa tccctttttg ggtaattact gaaacctggg attttggtgc attatctaag
      241 ttttactcat tgttaaatgg gcaacaccaa aggaaaattg ctaagaaatt taatgtagat
      301 gagaatacgt taaagaattg gttgaatgaa ataaacattg taagaaacct ttctgctcac
      361 cattctcgta tttggaacag aaaatttagc gatattgcta ttcctaagct agatgatcct
      421 cgttggtcga aatttaaaaa aatgcagcag tatttttcaa acttatcgct ggatgacaaa
      481 gcaaaggaga gaattttcgg aagggtagct attctgtggt ttttagttag tcaaaccagc
      541 actaattacc attggttaga taagtttgaa gatttattaa atgacttccc taatttaccg
      601 aatacaaaag tagaactgat gggatttaac agagaaatat tagagaaaat taaataaaat
      661 aagtacattc ctatagggtg tagataaaaa tgggcggatt tattatccgc ccaaattata
      721 ttatattttc gcttcgatta attttactaa tgccttgata tgatcgccac tcgcatttaa
      781 cgctggaatg tagcgataag attctccgcc ggcatgttca aagttctcgc ggttttcttc
      841 tgtaatttct tctaaggttt ccaaacaatc tgctgaaaag cccgggcaaa cgacagccac
      901 tttttttatc cctttttgtg ggaagctttc aagggtttga tcggtataag gctgtagcca
      961 ctcttcatca ccaaaacggg actggaaaga caaataccat ttttctcttg gcagacctag
     1021 cttttcagcc actaattctg ctgtttcttg gcaatgcttg gcgtaaaaat caccttccgt
     1081 ttcataacgt ttaggaatgc cgtgaaatga aaacagtaat aactcgtcag gtttaacatc
     1141 aatagagtta gccaacgctt gaatataaag cggatcgtta tgatagctgt gaataaaatc
     1201 aaacggcacg attttacgct gtgcttttaa accgttggca aacgcatcaa acaccgaagc
     1261 ggtagtagtg ctactgtatt gcggataaag cggtagcaca ataatccgct caaccccctg
     1321 cttgatgagg ttatcggtcg cactttcaat acttggattg ccgtaagaca ttcccaattc
     1381 caccaccaca tttttgcctt tggcatcaaa atagcgttgt accgctcgtt gttgttgccg
     1441 agaaatcgcc aataacggtg agccttcttc gctccatact gattgatata attttgccac
     1501 ttttggcgaa cgtcttggca aaatgatgca gtttaggatt gcttgccatt taaattttgg
     1561 tagatcgatc acacgaggat cgcttaaaaa ttgctttaaa taacgcttca ccgcacttgg
     1621 cgtgggttca tctggcgtac ctaaattagc cagcaaaata cctatttgtt ggggttgatt
     1681 cattgttcta tttctcatca atagttaata ttttttcgat tatgccacaa accaatataa
     1741 atttctgcga ttataacaag cggtcgtatt tttcaaaaat tttgcaaaca acccgagttg
     1801 tgcttggatt gtttcttgct ttttatttta attgcctgta gaattgcaac tcttttttat
     1861 ggtccttgtt tggcagaaac cattttatgc caacttttta aattttaggt agataagcaa
     1921 tgaaacgtac atttcaacca tcagtattaa aacgtgctcg tactcacggt ttccgtgctc
     1981 gtatggctac taaaaacggt cgtcaagtgt tagcgcgtcg tcgtgctaaa ggtcgtaaat
     2041 ctttatctgc ataattgcag aaccagccaa aacacctttc tgattaagtg tgaagaagct
     2101 aaatttctct cgggagctac gtttgttagc tcccgttcaa tttaaggcgg tgtttgaaga
     2161 gccacttcga gccagcacac cccaaatgac tcttcttgct agagagaata atctagaaaa
     2221 tcctcgtcta ggcttaactg ttgccaaaaa acatttaaaa cgggctcacg accgtaatcg
     2281 cattaagcgg atagtgcgtg aaagttttcg cctcaagcaa cacgaattgc cgaatttcga
     2341 ttttgtattt gtggcaaaag gcggcattgg caaattagac aacgcaacgc tgtttgaaac
     2401 attggaaaaa ctatggtcaa gacacattcg cctgagcaaa aagccggcac aacagaatcc
     2461 ataaatcagc cacctcgtct cagcctatta gccaaaattc tattgctacc gatttatttc
     2521 tatcgctatg ctatcagccc attgattggc ccacgttgcc gattttaccc aacctgctcc
     2581 acctatgcgg tcgaagcgat taaaatccac ggagcaatta aaggtgggta tttagcgttt
     2641 aagcgtattc tgcgttgcaa ccctttgagt gagggaggcg aagatcctgt cccactttgt
     2701 tgtaaaggca actgcaaaca taatgataaa aaatagccta aactcaataa gttaggctat
     2761 tttgtttaat acaaacggtc atttttagta aaaaatttac ttgtgagact gatattgaat
     2821 aaggcaataa ttcgagtgaa ttaaatgcta aaggaagaac cacaaccaca ggttgagctt
     2881 gcatttggat tattcacgac aaaacgtgag ccgtccagcc cttcggtata atccaccgtg
     2941 ccaccaatta aatattgtag gctcatcggg tcaaccacca agccaacgct ttgattctca
     3001 atggtaaggt ctccctcatt gacttgatca tcaaaggtga acccatactg gaatccacta
     3061 cagcccccac ccgtaatata cacacgcaag cgaagattcg ggttctcttc gccctcaatt
     3121 aagcttttta ctttacgagc cgccgcatca gtaaagatta aaggaatttg aatatcgctc
     3181 attttgtttt agatcaaaat tttactgtga ttggatatta tctaataatt acataggaag
     3241 tgcaatctta aaaaagagta aatgaatgca gtggaaataa gaaaattatg tataatgctg
     3301 tacagaaaca tgcaaatttt agaggaaact atggcagatt cagtaaaaag tcatgagcaa
     3361 agctcggatg agattgattt aattgagatt tttcgtgctc tatgggataa aaaatggtgg
     3421 attgttataa caacattcat taccacatta cttgctggta tttatgcatt tactgcaaaa
     3481 gagcaatgga cgtctaaggc aacagttatt gcccctaaat taacagagtt aggtgagtat
     3541 ttaaatgttc gcagagaata tagtcggatt ttgcgtgtag atcctgttga tccaaatgca
     3601 ttgtctgcga gtttgttcaa caattttaac cgattagcac aatctcaaga tactaaaaat
     3661 gaatttttta tcacttccaa tgtgtataag acgttagctg aaggaaaaga tgagcagggg
     3721 caacgcacag ttttatccaa tttgagtaat gaaaatacca gctttattat tcctgatgca
     3781 aagaaagatc ctaatgcaat aggtcgtaca ctatcttttt ctgcagagac acctatggag
     3841 gcgcaggaca cccttggtaa gttggttcaa ttcattaata gcaaagcatt tgctgttgaa
     3901 ttagaagatt ttctagtcga tttccaaaat gtgcttactg cattacaata tgaaaaatca
     3961 ttaattcagg aagatttatc tgtgaataag tcggttcagt tggaaaactt aaataaagcc
     4021 tatgaaactg cacaaaaagc aggtattaaa gaatattcaa aagcatttaa tcaatcagat
     4081 gcatcaaata ttgcagcagc tttaagtgat actaaaatct ccctttctga ttcaaaatta
     4141 gcagatagtt catatttatt tatgttaggg gaaaaatacc taaaggctca aattgatgtg
     4201 gctaatgaga aaggtgttgt ttatccacca cgttattatc aaattgatta ccaacttaaa
     4261 cagctagagc cgttatttga aaaaacaaag acagttaaaa cacaaacttt tagttaccaa
     4321 gcttcgccgg attatcctgt aataaaagat aaacctaaaa aggtaattat tttattaata
     4381 ggagctttta ttggtttgat gatttcttgt ttgtcaatta tcctaactca ttatctgctt
     4441 gcgagtaaat ttaaatgaat ttgattattt gttacactcc attacaagtg aaaatagctg
     4501 aatctattgt aaaaaagtac tcaggagaaa agtttttggg agtttttcta ggttctgaga
     4561 aaaatgataa ga
//
LOCUS       DANMCL010000128         4436 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.131, whole genome shotgun sequence.
ACCESSION   DANMCL010000128 DANMCL010000000
VERSION     DANMCL010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4436
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.131"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(247..1014)
                     /locus_tag="PXF40_002538"
     CDS             complement(247..1014)
                     /locus_tag="PXF40_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HDL5803813.1"
                     /translation="MSKIIKIGKVANNSDAIDAISTQPRHSVIVGTIKRLQTDRIDLL
                     YQHRVDPNVPIEEVAGAIKDLMKQGKVLNWGLSEAGEKTIRKAHAIQPLTAVQSEYSL
                     FFRGREKDVILVCEELGIGFVPWSPLAMGALAGYVDENSRFEADPSKDLRGIIPRFTP
                     EAMQQNVKLIQLVQKWAKRKLCTPAQLSLAWLMAQKAFIAPIPGTSKARHLLDNLGAD
                     DVKFTEEELAQFRQELEAIEIVGLRLPEAILNFSEAK"
     gene            1013..1333
                     /locus_tag="PXF40_002539"
     CDS             1013..1333
                     /locus_tag="PXF40_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803814.1"
                     /translation="MELKVIHKNLVDSAKIKLHAVYLVIFLFVSHFAMIFGMADPISA
                     GYQPTTPAMTHSMQMDAKQITEMHNQMMTGEITPEEMMKMHQEMNPNMNMPNTQGGHS
                     EHHK"
     gene            1515..1970
                     /locus_tag="PXF40_002540"
     CDS             1515..1970
                     /locus_tag="PXF40_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005819327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF411 domain-containing protein"
                     /protein_id="HDL5803815.1"
                     /translation="MKLHKFTRSLLLLSLGITAFAQAQTLSMEVWKSPTCGCCNEWIS
                     YMQKNGFEVKVNETGNYDAHKRFNIKYEHASCHTAVIDGYVIEGHVPAEDIKRLLAEK
                     PDAIGLSAPGMPIGSPGMDGEAYGGRKDPYDVVLIKKNGESEVFKSYNQ"
     gene            1984..3531
                     /locus_tag="PXF40_002541"
     CDS             1984..3531
                     /locus_tag="PXF40_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase family protein"
                     /protein_id="HDL5803816.1"
                     /translation="MKRRDFLRYGIGISLASSSLYSLANMMNHAQHGNMAMMHSVPTG
                     LMPTEAMPSGLSLNGILPKLANQSTQAGLFKATLKAEPIKIRLADNKETEFWAYNGQL
                     PGPQIEVFEGDTVEIEFINHLPQPSTVHWHGLDVPNEADGNPMDMVEPQGKKVYRFTL
                     PQGSAGTYWYHPHPHDHVSEQVYKGLAGTFVVKAKNDPLAHLPEQHWVISDLRLNADG
                     TIPANTMLDWINGREGEFVLINGQYQPQIQVKTNERIRLWNATSARYFRLNIPGVKWI
                     VVGTEGGLLEKPRSPVDELLLTPAERVEVIMVGETQGTVNLQSGYYDRRKMMVQEQPK
                     DLTLATIQVKSEPVQLPESLRSLPNWDEPKQVRQIRFSEKMMNHTNMPMMNHGTHHAT
                     TTLTDNPIPPMMNGMFLINGQTFDMNRIDFVTKLNEVEQWEIFNESHMDHPFHLHGTQ
                     FEVIQHTLNGKTFKPEGRALKDVVNLRPYEKVIIRFKQGHTGLKMYHCHILEHENLGM
                     MGMFKVE"
     gene            complement(3621..3776)
                     /locus_tag="PXF40_002542"
     CDS             complement(3621..3776)
                     /locus_tag="PXF40_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HDL5803817.1"
                     /translation="MGLNRAEMMYREGAYVIDPVFPATLGYAGAGVVVAVGDDAGEFQ
                     IGDKVSV"
     gene            3865..4044
                     /locus_tag="PXF40_002543"
     CDS             3865..4044
                     /locus_tag="PXF40_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803818.1"
                     /translation="MFLVNQLLAITIATSAVLTNAQLAILAVAFWIAILPCARLATAV
                     GVWVFDDVVHNNSPN"
     gene            4093..>4436
                     /locus_tag="PXF40_002544"
     CDS             4093..>4436
                     /locus_tag="PXF40_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803819.1"
                     /translation="MPFKTVTFAQATTNDGQSLLAVNDLFIGPKSHTSAQYILQWNGA
                     EEVQSSSGIIVSTGLGSTGWFQSILAGAMAITGEASHPLLQGFSWSDRKLQFSVREPF
                     PSRTTGVALTFGT"
BASE COUNT         1363 a          917 c          891 g         1265 t
ORIGIN      
        1 ataatatttg tccataaatt cattgagttg attatgccat ttttacactt attgactata
       61 gcgttttgcc taatcatctg tctgattcca gttttaccct tttcccaata tctttcaatt
      121 tcgataaatc ttccactaat cttgctacat attcaagaaa aagtgcgatc gtttttcaaa
      181 ggattttatg aaaacgaccg ctgtaagaaa gaatttttat ttacgacttt ttcaggtatc
      241 tgaaaactat ttcgcttctg aaaaattcaa aattgcttca ggcaaacgca agccgacaat
      301 ttcaatggct tctaattctt ggcggaattg cgccaattct tcttcggtaa atttcacatc
      361 gtctgcgcct aaattatcca acaaatgacg ggctttgctc gtcccaggaa ttggcgcgat
      421 aaacgctttc tgtgccatta gccaggccaa agaaagctgt gcaggcgtac aaagtttgcg
      481 ttttgcccat ttttgcacaa gctggattaa cttcacattt tgttgcatcg cttcgggtgt
      541 aaagcgtggg ataataccac gcaaatcttt gcttggatca gcctcaaaac ggctgttctc
      601 gtccacataa ccagccaatg ctcccattgc cagcggcgac caaggcacaa acccaatccc
      661 taattcttca caaacgagaa tgacatcttt ttcacgacca cggaaaaaca acgagtattc
      721 gctttgtacg gcggttaaag gctgaatagc gtgtgccttg cgaatggttt tctcgcctgc
      781 ttccgacaag ccccaattca aaactttgcc ttgtttcatt aaatctttaa tagcgccagc
      841 cacctcttca atcggcacat tgggatcaac acggtgttga tagagtaagt caatacggtc
      901 ggtttgtaag cgttttatcg taccgactat tactgaatgg cgtggttggg tagatatcgc
      961 atcaattgca tcactattat tagctacctt tcctattttt attattttac tcatggaatt
     1021 aaaagttatt cataaaaatc tcgtggatag tgcaaaaatt aaattacatg cggtttatct
     1081 tgtgattttc ttatttgtga gtcactttgc tatgatcttt ggcatggcag atcctatttc
     1141 agcaggctat caacccacta caccagcaat gactcattca atgcaaatgg atgctaaaca
     1201 aataacagaa atgcacaacc aaatgatgac gggcgaaata acgcctgaag aaatgatgaa
     1261 gatgcatcaa gaaatgaacc ctaatatgaa tatgccgaat actcaaggtg gtcattcaga
     1321 acatcataaa taataattct gatcacattt taaaaaataa tagtggatgg tacgttggca
     1381 tatctctact acaagcagta ggattttgag aaaaattttc aaatgataga attttttcag
     1441 attacttgac cttaacccta ggttaagctt taaaatgatg tccattcaat ctcaataaaa
     1501 aataaggaca tcttatgaaa ttacataaat tcacccgctc attgttgctt ttaagtttag
     1561 gcataaccgc ttttgctcaa gcacaaacac tttctatgga agtgtggaaa agcccgactt
     1621 gtggctgttg taatgaatgg atcagctata tgcagaaaaa cggttttgag gttaaagtca
     1681 acgaaacagg caattatgat gctcataagc gctttaacat taaatatgaa catgcttctt
     1741 gccacacagc cgtgattgat ggctatgtga ttgaaggaca tgtacctgct gaggatatca
     1801 aacgtttact cgcagaaaaa cccgatgcaa taggcttgtc tgcaccggga atgccaattg
     1861 gttcaccagg tatggacggt gaagcatacg gcggacgcaa agatccttat gatgttgttt
     1921 tgattaagaa aaacggtgaa agtgaagtgt ttaaatccta taaccaatag ggggggggaa
     1981 agaatgaaac gtcgagattt tttacgttat ggaattggaa ttagcttagc cagtagctcg
     2041 ctttatagcc tcgcgaatat gatgaaccac gcacaacatg gcaatatggc gatgatgcat
     2101 tcagtaccta ctggcctaat gccaactgag gcaatgcctt caggtttatc gcttaatggg
     2161 atattaccaa aacttgctaa tcaatcgact caagctggac tgttcaaagc cactttaaaa
     2221 gcagagccaa ttaaaattcg cctcgcagac aataaagaaa cggaattttg ggcttataac
     2281 ggacaactac cagggccaca aattgaagta tttgaaggag ataccgtaga aattgaattt
     2341 atcaatcacc taccacaacc ctcaacagta cattggcacg gcttagatgt accaaatgag
     2401 gcggatggta acccgatgga tatggttgaa ccgcaaggga aaaaagtcta tcgctttacg
     2461 ctacctcaag gcagtgctgg gacatattgg taccaccctc atccacatga ccatgtttcc
     2521 gaacaagtct ataaaggctt agcaggcact ttcgttgtta aagcgaaaaa tgatccgctt
     2581 gcacaccttc ctgaacaaca ttgggtgatt tccgatctgc gtttaaatgc cgatggcacc
     2641 attccagcaa acacgatgtt agattggata aacggtcgtg agggtgaatt tgtgttaatc
     2701 aacggtcaat atcagcccca gattcaagtg aaaacgaatg aacgaatccg tctttggaat
     2761 gccactagcg ctcgttattt tcgtttaaac attccagggg tgaaatggat tgtggtgggt
     2821 accgaaggtg gtttacttga aaaacctcgc tcgcctgttg atgaactgct acttacacca
     2881 gccgaacgcg ttgaagtgat tatggtgggt gaaacgcaag gaacagtcaa tttacaaagc
     2941 ggttattatg atcgccgtaa gatgatggtt caagaacagc ctaaagatct cactttagcc
     3001 acaattcagg tgaaatcaga acctgttcag ttacctgaaa gcttaaggtc cttgcctaac
     3061 tgggatgagc caaagcaggt tcgccaaatt cgctttagtg aaaaaatgat gaaccatacg
     3121 aatatgccaa tgatgaatca cggtacacat cacgctacta caacactaac ggacaaccct
     3181 attccaccaa tgatgaatgg tatgttctta atcaacggtc aaacctttga tatgaaccgt
     3241 attgattttg ttaccaaatt gaatgaagtg gaacagtggg aaatcttcaa tgaaagccat
     3301 atggatcatc cattccattt acacggcact caatttgaag taattcaaca tacgttaaac
     3361 ggtaaaacct ttaagccaga aggcagagcg ttaaaagatg tggttaattt acgcccttat
     3421 gaaaaagtga ttattcgctt taagcaagga catactgggt tgaaaatgta ccattgccat
     3481 attttagaac atgaaaatct cggtatgatg gggatgttta aagtggaata gtggtatcta
     3541 actataaaaa tagagggatt tcgtcataaa aaatctgcac cttaatcagt tggtttttag
     3601 tccaactttt ggggtgcaga tcagacgctc actttgtcgc cgatttgaaa ttcgccagcg
     3661 tcatcgccca ctgccacgac cacgcctgcc cctgcataac ccaaagtcgc agggaacaca
     3721 gggtcaatca catacgcccc ttcccgatac atcatctcgg cacggtttag tcccaatgca
     3781 cggcacggtt tttaaacatt ttcattatag ttttccttat caaaatggga tttggcaaac
     3841 attgggcaaa cctaagcccg cccaatgttt ttagttaatc aattacttgc aatcacaatc
     3901 gccacaagtg cagttttgac aaatgcacag ctcgccattt tggcagttgc attttggatt
     3961 gcaattttgc cctgtgcaag attggcaacc gcagtgggcg tttgggtttt tgatgatgtc
     4021 gttcataaca attctccaaa ttaaaggttg attatcaaaa caaaaaccgt ttttaaaccc
     4081 attaataaaa aaatgccatt taaaacggtc acttttgcac aagcaacaac caatgatggt
     4141 caatccttat tagcggttaa tgacttattt attggcccta aaagccacac ttccgcacag
     4201 tatattttgc aatggaatgg cgctgaagaa gtgcaatctt catcaggcat tattgtatca
     4261 acaggattgg gatcaacggg gtggtttcaa tctattcttg ctggtgcgat ggcaattaca
     4321 ggagaagctt cgcaccctct attacaaggc tttagctgga gtgatcgaaa gctacaattt
     4381 agtgtaagag agccatttcc aagtagaaca acaggtgttg cactgacttt tggcac
//
LOCUS       DANMCL010000129         4417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.132, whole genome shotgun sequence.
ACCESSION   DANMCL010000129 DANMCL010000000
VERSION     DANMCL010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.132"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            97..1305
                     /locus_tag="PXF40_002545"
     CDS             97..1305
                     /locus_tag="PXF40_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HDL5803820.1"
                     /translation="MSKNLILILNCGSSSLKFAILDPKTGDEKLSGLAEAFHLEDARI
                     KWKLNGEKGNADLGAGAAHSEALTFIAEKLLSDELKAGIGAIGHRIVHGGEKFTSSVV
                     ITDEVIKGIEDATQFAPLHNPAHLIGIKEAFRIFPELKDKNVAVFDTAFHQTMPEHAF
                     LYALPYTFYKENGIRRYGFHGTSHFYITSQVAELAGKSVEQTNAIICHLGNGGSVSVV
                     RNGKCIDTSMGLTPLEGLVMGTRSGDLDPAIISFLYNNLGMSMDEIDTTLVKKSGLLG
                     LTGVTSDCRYAEDNYNDVSKPEAKRALDVYSYRLAKYIGSYMAILGDDHLDAIAFTGG
                     IGENSGLVRELTLNHLKLFGIKLDQERNLAARFGKDGVITADESTFKAVVIPTNEELV
                     IAQDTAKLAL"
     gene            1358..3493
                     /gene="pta"
                     /locus_tag="PXF40_002546"
     CDS             1358..3493
                     /gene="pta"
                     /locus_tag="PXF40_002546"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005542370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HDL5803821.1"
                     /translation="MSRTIILIPISTGVGLTSVSLGLVHALEQKGSKVGFLKPISQPI
                     SGEDTLDRSTTIIRAEQTTEVGEPFMLSEAETLIGQNQTDVLLEKVVERHQKLSKNNE
                     IVIVEGLIPTRKNSYANSINYEMAQALDAEIVLVAAPASDTPAQLKERVEAAASQFGG
                     RNNPNLLGVIINKFNAPVDDSGRTRPDLTEIFDSFQHSNNNVSEVEHLFAKSPIKLLG
                     CISWKAELIATRAIDVAKHLGASIINEGEIKARRIRGVTFCARNLPNMVDHFKAGSLL
                     VTSADRPEVLVAASLAVMNGIEIGAILLTGGYKIDSSIAKLCQQAFETGVPVFRIEGN
                     TWQTALSLQSFSLEVPVDDKERIAAIKEYMASKFNVGFIDEVSKAATRARRLSPAAFR
                     YQLTEYARQAKKRIVLPEGDEPRTVKAAALCAERGIAECVLLANPTDVQRVAEAQGVV
                     LGKGVTIIDPASIRENYVDRLVELRKAKGMTEVVAREQLLDTVVLGTMMLEANEVDGL
                     VSGAVHTTANTIRPPMQIIKTAPGSSIVSSIFFMLLPDQVLVYGDCAVNPDPTAEQLA
                     EIAIQSAESAKAFGIDPRVAMISYSTGTSGSGADVEKVKEATRIAQEKRPDLIIDGPL
                     QYDAAIMEDVARSKAPNSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGM
                     RKPVNDLSRGALVDDIVYTIALTAIQATQ"
     gene            3607..4287
                     /gene="can"
                     /locus_tag="PXF40_002547"
     CDS             3607..4287
                     /gene="can"
                     /locus_tag="PXF40_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HDL5803822.1"
                     /translation="MEKIERLFANNHAWATKMKDEQSDYFKELAEHQKPTYLWIGCSD
                     SRVPAEKLTGLGPGELFVHRNVANMVIHTDLNCLSVVQYAVDVLEIEHIIICGHTNCG
                     GINAAIAQKELGLINNWLLHIRDIWFKHSHLLGKLPYEERSNVLTRLNVAEQVYNLGQ
                     SSIIKTAWEQGKSLSLHGWVYDVTDGFLIDQGVMATSRETLEITYRNAIAKITTEANE
                     KIVLNDEN"
BASE COUNT         1386 a          812 c          887 g         1332 t
ORIGIN      
        1 ttttaagatc tgaaaggtgt atcctttaca ccttaaatac accaataaaa atagtatttt
       61 cttcaaactc atttcataaa ataaggtaat ttgaccatgt ctaaaaactt aatcttaatc
      121 cttaactgcg gtagttcatc tcttaaattt gctattttag atcctaaaac aggtgatgaa
      181 aaattatctg gacttgctga agcttttcat ttagaagatg cacgtatcaa gtggaagtta
      241 aacggggaga aaggtaatgc tgatttaggt gcaggtgccg cacatagtga agcacttacc
      301 tttattgctg aaaaattgtt atctgacgaa ttaaaagcag gtatcggcgc gattggtcat
      361 cgtattgttc atggcggtga aaaattcacc tcatcagttg taattaccga tgaagtgatt
      421 aaaggtattg aagatgcaac gcaatttgca ccattacaca accctgcgca tttaattggt
      481 attaaagaag cattccgcat tttccctgaa ttaaaagaca aaaacgtagc tgtatttgac
      541 actgcattcc atcagacaat gccggaacac gcattcttat atgcacttcc atatacattc
      601 tataaagaaa atggtattcg tcgctacggt ttccatggca caagccactt ctatatcacc
      661 tcacaagttg cagaattagc aggtaagtct gttgagcaaa ccaatgccat tatttgccac
      721 ttaggtaacg gtggttctgt ttctgttgta cgcaatggta aatgtattga tacctcaatg
      781 ggtttaactc cattagaagg tttagtaatg ggtactcgct ctggtgactt agaccctgcg
      841 attatctctt tcttatacaa taacttaggt atgtcaatgg acgaaattga tactactcta
      901 gtaaaaaaat ctggtctttt aggtttaact ggcgtaacta gtgactgtcg ttatgcggaa
      961 gataattaca atgacgtatc aaaaccggaa gcaaaacgtg ctttagatgt atatagctat
     1021 cgtttagcta aatatattgg ttcatatatg gcaattttag gcgatgacca cttagatgct
     1081 atcgcattta caggtggtat cggtgaaaat tcaggcttag tacgtgaatt aaccttaaat
     1141 cacttaaaat tatttggcat taagttagat caagagcgta accttgctgc ccgttttggt
     1201 aaagatggag tcattacagc ggacgagtca acatttaaag ctgttgttat cccaactaat
     1261 gaagaactcg tgattgcaca agataccgct aaattagcat tataatcata gggggcagat
     1321 attctgccct ttcactttct tttaatttgg aaatattatg tctagaacga tcattcttat
     1381 ccctatttca actggtgttg gtttaaccag tgttagctta ggtttagtac atgctttgga
     1441 gcaaaaaggt tctaaagtag gatttttaaa accgatttct caacctatca gcggtgaaga
     1501 tacgttagac cgctcaacaa cgattatcag agcagaacaa acaacagagg ttggtgagcc
     1561 gtttatgtta agcgaagctg aaacattaat cggtcaaaac caaacggatg tattgttaga
     1621 aaaagtggtg gaacgccacc aaaaattatc aaaaaataat gaaattgtca ttgttgaagg
     1681 tttaattcca acgcgtaaaa actcatacgc taacagcatt aactatgaaa tggctcaagc
     1741 ccttgatgct gaaattgtat tagttgcagc accggcctca gatacaccag ctcaattaaa
     1801 agagcgagtt gaagctgccg cttcacaatt tggtggacgt aacaacccaa atttactggg
     1861 cgttattatc aataaattca atgcaccagt agatgattca ggtagaaccc gtccagattt
     1921 gactgaaatt tttgattcat ttcaacactc aaataataat gtttcagaag tcgagcatct
     1981 ttttgctaaa agtccaatta agctgttagg ctgtattagc tggaaagcag aacttattgc
     2041 tacacgagca attgatgttg caaaacattt aggcgcttca attattaatg aaggcgaaat
     2101 aaaggctcgt cggattcgcg gtgtgacatt ctgtgcacgt aacttaccaa atatggtcga
     2161 tcattttaaa gccggtagtt tattagttac ctctgcggat cgtcctgaag tgttagttgc
     2221 tgcatcgttg gcggtaatga atggcatcga aattggtgct attttactaa ccggtggtta
     2281 taaaattgat agctcaattg caaaactttg ccaacaagca tttgaaaccg gtgtgcctgt
     2341 attccgtatt gaaggtaaca cttggcaaac cgcattaagc ctacaaagct tcagcttaga
     2401 agtgcctgta gatgataaag agcgtattgc tgcaattaaa gaatatatgg caagcaaatt
     2461 taatgtaggt ttcattgatg aggtttctaa agccgctact cgtgcaagac gtttatcacc
     2521 tgcagcattc cgttaccaat taaccgaata tgcccgtcaa gcgaaaaaac gcattgtttt
     2581 acctgaagga gatgagcctc gtactgtgaa agcggctgca ttatgtgctg agcgtggcat
     2641 tgcagaatgt gtgttattag ctaacccaac agacgtacaa cgtgttgctg aagcacaagg
     2701 cgtggtatta ggtaaaggcg taacgattat tgaccctgcg agcattcgtg aaaattatgt
     2761 tgatcgctta gttgaattgc gtaaagcaaa aggaatgact gaagttgttg ctcgtgagca
     2821 acttttagat acagttgtat tgggtacaat gatgcttgaa gctaatgaag tggacggttt
     2881 agtctcaggc gcagttcaca caaccgctaa cactattcgc ccaccaatgc agatcattaa
     2941 aactgcaccg ggaagctcta ttgtatcttc tatcttcttt atgctactac ctgatcaagt
     3001 attggtatat ggtgactgtg cggtaaaccc tgacccaact gcagaacagc tagcggaaat
     3061 tgcgattcaa tcagcagaat ctgccaaagc ctttggtatt gaccctcgtg ttgcaatgat
     3121 ctcctactct accggtacat caggttcagg tgcggatgta gaaaaagtga aagaagcaac
     3181 tcgtattgcc caagaaaaac gtccagattt aatcattgat ggcccattac aatatgatgc
     3241 ggcgattatg gaagatgttg cccgctcaaa agcaccaaat tcacctgtag caggtaaagc
     3301 aactgtattt gtcttcccgg atttaaatac tggtaatacc acctataaag cggtacaacg
     3361 ttcggcagat ttagtctcta tcggcccaat gttacaaggt atgcgtaaac ctgtaaatga
     3421 cttgtcccgt ggggctttag ttgacgacat cgtttatact attgcgttaa ctgcgattca
     3481 agcaacgcaa taattccctc ccaaatgaaa ccaaatgccc ttaaaactaa gggcattttt
     3541 attttttacc tacccgactt ttcaatttaa tcatataatc aagattagtg ttaaaaagga
     3601 gaatttatgg aaaaaattga acgcttattt gccaataacc acgcctgggc aactaagatg
     3661 aaagatgaac aatcggatta ttttaaagaa ttagcggaac atcaaaagcc aacctattta
     3721 tggattggct gttccgatag tcgtgtgcct gctgaaaaac tcacagggtt aggccccgga
     3781 gaattatttg ttcatcgaaa tgtagcaaat atggtgattc acactgatct taattgtctg
     3841 tcggttgttc aatatgcggt agatgtatta gaaattgagc atattattat ctgtggtcac
     3901 actaattgtg gtggtatcaa tgcggcaatt gcacaaaaag aacttggttt aattaataac
     3961 tggttgttac atattcgtga tatctggttt aaacacagcc atttactagg caaacttccc
     4021 tatgaagagc gatcaaatgt cttgacccga ttaaatgttg cagaacaagt ttataattta
     4081 ggtcagtcct ctattattaa aaccgcttgg gaacagggta aatccctctc gctacacggt
     4141 tgggtatacg atgttacaga tggtttcttg attgaccaag gtgttatggc tactagccga
     4201 gaaacattag aaattaccta tcgtaatgca atagctaaaa taacaaccga agcaaacgaa
     4261 aaaatagttt taaacgatga aaattagcca ttgtaagcgg ttaaatttat cgattttttt
     4321 acaatctttt tataaaaaac cattgtttga tggtttttta ttttcctgat tcctgttatc
     4381 gtcaaaaaag ttttaaattt cagcaaaagt gtaaaat
//
LOCUS       DANMCL010000130         4392 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.133, whole genome shotgun sequence.
ACCESSION   DANMCL010000130 DANMCL010000000
VERSION     DANMCL010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4392
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.133"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1083)
                     /locus_tag="PXF40_002548"
     CDS             complement(<1..1083)
                     /locus_tag="PXF40_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HDL5803823.1"
                     /translation="MGIMSKSISIFNHKGGIAKTTTAFNVGWSLANQGYQVLLVDLDS
                     QCNLTGLVLGYDQCKEDSDLALFYNNRHHLTMEGIVEALINGQSPDNYLSGNVGQITQ
                     TLNPNLFLLPGHLNVSELDSQISVSLKIAAGVPATRNIPGNLPTLIKKVAEQNNIDYI
                     LYDLSPNVGGLNEVILMSSDYFIVPTSPDFFCWQAVGSLAKNIRKWHNELKAFKELNG
                     FNQSSYAIKNKPQFLGTIQQRYRPRKGQPAKSFEKWIERIRNEVITNFVPVLKTIDCA
                     IDDTAIYAALKSTNSDLEPFDLAHIADFNSLIAISQELRVPVFSLTKEQIKNSGQFGH
                     ALNTMDESKENFDQEFQSLAERIIQLT"
     gene            complement(1148..1579)
                     /locus_tag="PXF40_002549"
     CDS             complement(1148..1579)
                     /locus_tag="PXF40_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803824.1"
                     /translation="MKKMAIVALSAFFSMNAFANNNVVYSCTTTDNQTLKVTKEGGNY
                     VYSHGNTTFKNPVKEALKNPASEIAGGSQFTTISLELRNAGKSYIVGHIEADPKSPFE
                     ASVQIQDIKTGNDITSFECRSDKPIRHNFDRKLMRKSGFAA"
     gene            complement(1583..3685)
                     /locus_tag="PXF40_002550"
     CDS             complement(1583..3685)
                     /locus_tag="PXF40_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrating conjugative element protein"
                     /protein_id="HDL5803825.1"
                     /translation="MKKAKSLKFLTACIMLTTMSGYANSNTVNVGNSISNFIENTTGY
                     RTGNLGVSGNNALTEYYPVLSDYMHYSIGGGSAISAPASRGRPNQYGIGIGWKSNLTC
                     GNFDIKLSIKNQLNGITEGFKDLYGNIIESATGAVASLPAMIIQRANPQLYDILSNGL
                     YQGKLDFNNFKTSCEAMSNQLADLAMDSKLAKMAGLHRAAEIAETEPDAMAAKKKMDK
                     KDAEKGIPWVGGEQRGGKNQKPMAIVADIVGAGYNLALGRGPLEKGDIPIASCDGMLC
                     TEWKNPSEAAAYASEVIGETFLDACETCEQSSSGAKAGKGIAHFIEQTTIEKATKLEA
                     ALNHLDSLTPEQLNSLSTSTVSVTKGVLEAIAASPDAALLGARLSQELAISKEMEKLL
                     LIRRAMLAGMREPNVIKSSLVEEAERNLKLLDREIEQVKLEMELQRSINGNTALAAIT
                     QQMNEQALAIDDNAMGDGNRRFANLSNQAGANNLNTSGIANSAQNAVGDRYIAIPKSD
                     GSGMSDFYGAYKASPTNIVSNVNVGSYTQIAQMNGNANEQATALIKQFEGYLSHGKWD
                     VNANRAGYGSDTYTTADGMVHRVQKGTYVSREDAERDLARRMPQFMNVARGNVGADVW
                     AKLTPQAQAALTSVSYNYGSLSKLESVQKAAAVSAQSGDMTALANSIRNLQGHNNGVN
                     ARRRNQEADYIINAPKGN"
     gene            complement(3712..3990)
                     /locus_tag="PXF40_002551"
     CDS             complement(3712..3990)
                     /locus_tag="PXF40_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HDL5803826.1"
                     /translation="MQAKTFYYLPLLLLSAMASASPANKPSDVTVKVFTSESYPKVFP
                     HSGDWATHSDSFSNTENYSWALWRPYSCCKKQGQVFLGHVDWKSTHTH"
BASE COUNT         1224 a          872 c          835 g         1461 t
ORIGIN      
        1 agtcagttgt ataattcgtt ctgctaatga ttgaaattct tggtcaaaat tttctttact
       61 ttcatccatt gtattcaaag catgtccaaa ttgacctgag tttttaattt gctcttttgt
      121 taaggaaaat acgggaactc gtagctcttg gctaatagca atcaacgaat taaagtcggc
      181 tatgtgagcc aaatcaaatg gctctaagtc agaattcgtt gatttaagag cagcataaat
      241 agctgtatca tcaatagcac aatcaatagt ttttaatacc ggcacaaaat tcgtaatgac
      301 ttcatttcta attcgctcaa tccatttttc aaatgatttg gccggttgcc cttttcttgg
      361 tcgataacgt tgctgaatag tacctaaaaa ttgtggctta tttttaattg cataagatga
      421 ttggttaaaa ccattaagtt ctttaaatgc ttttaactca ttatgccatt tgcgaatatt
      481 tttagcgagc gaaccaactg cttgccagca gaaaaaatca ggtgatgtag gtacaataaa
      541 gtaatcacta gacattagga taacttcatt taatccaccc acatttggac taagatcata
      601 gagtatgtaa tcaatattgt tttgttcagc tactttctta attaaagtcg gaagattgcc
      661 gggtatattt cttgttgctg gaacaccggc agcaattttt aatgatacac taatttgcga
      721 atcaagctcg gaaacattaa ggtgaccagg taacaagaac agatttggat tcagggtttg
      781 agtgatttgg ccaacatttc cactaaggta gttatcaggg ctttgtccgt ttatcagtgc
      841 ttcaacaata ccttccatag tcaaatgatg tctattattg taaaaaagcg ctaaatcact
      901 atcttctttg cattgatcgt agccaagtac cagaccggtt aggttacatt gtgaatccaa
      961 atcgactaac aatacttgat agccttgatt tgctaaactc caaccaacat taaatgcagt
     1021 tgtagtttta gcaatacctc ctttatgatt aaaaatactg atagacttac tcataatacc
     1081 cataattcta tgaaataatt aacccaccga actcatttga gaatggtggg ttaatgcttt
     1141 gctttagcta ggctgcaaat ccagattttc tcatcagttt gcgatcaaag ttgtggcgaa
     1201 taggcttatc ggaacgacat tcaaatgatg taatatcatt tcctgtttta atatcctgaa
     1261 tctgaacact tgcttcaaaa ggtgatttag ggtctgcttc tatatgacct acaatataag
     1321 attttcctgc atttcttaat tcgagcgaga ttgttgtgaa ttgtgaacca cctgcaatct
     1381 ccgatgccgg atttttgaga gcttctttta caggattttt gaatgtggta ttaccgtgag
     1441 agtacacata gtttcccccc tctttggtaa cttttaacgt ttggttatct gtagttgtgc
     1501 aagaatacac tacattgtta tttgcaaaag cattcattga gaaaaatgct gataaagcta
     1561 caattgccat ttttttcata ggttagtttc cttttggtgc gttgataatg taatcggctt
     1621 cctggttacg tcttcgagca ttaacaccat tattatgccc ttgtaaattt cggattgagt
     1681 tagctaaagc cgtcatatca cctgattgtg cggagacggc agccgctttt tgaacacttt
     1741 ctagtttaga taatgaccca tagttgtatg ataccgacgt taatgctgct tgtgcttgag
     1801 gagtcaattt agcccaaacg tcggcaccaa cattacccct tgcaacattc ataaattgag
     1861 gcattcttcg tgctaaatca cgttcagcat cttcccggct tacataagtg cctttttgaa
     1921 cccgatgaac cataccatct gcagtagtat aggtgtcaga gccatatccg gcacggttag
     1981 catttacatc ccatttcccg tggcttaaat atccttcaaa ctgtttgata agagccgttg
     2041 cttgttcatt cgcattgccg ttcatttggg caatttgggt atagctccct acattcacgt
     2101 tactgacaat gtttgttggg gaggctttat atgctccata aaaatcactc atgcctgagc
     2161 cgtctgattt ggggatagca atatatctat cgccaacggc attttgtgca gaattagcaa
     2221 tgccactggt gttgagatta tttgctccgg cttgattgct taaattggca aagcgacggt
     2281 ttccatcacc catcgcatta tcatcaatag caagagcttg ttcgttcatc tgttgagtaa
     2341 ttgcagctaa tgctgtatta ccgttgattg aacgttgcag ttccatttcg agtttaactt
     2401 gctcaatttc tctgtcaagt aatttgaggt ttctttctgc ttcttctact aaggaagatt
     2461 ttataacatt tggctcacgc ataccggcta acattgctcg gcgaatcagt agcaattttt
     2521 ccatttcttt agaaatagct aattcttgcg ataaccttgc acccagcaag gctgcatccg
     2581 gcgaagcagc aatggcttct aatacgcctt ttgttacact gaccgttgat gtactcagtg
     2641 aattgagttg ttccggcgtt aaactatcta agtgattcag tgccgcttct agctttgtgg
     2701 ctttttcaat agttgtttgt tcaataaaat gggcgattcc tttcccggct ttagctccac
     2761 ttgaactttg ttcacaagtt tcacaggcat caaggaatgt ttcaccaatc acttcacttg
     2821 cataggcagc agcctcgctt ggatttttcc attccgtaca aagcatacca tcacagcttg
     2881 caataggtat atctcctttt tctaatggtc ctcgtcctaa agcgaggtta tatccggctc
     2941 caacaatgtc agcaacgata gccattggtt tttgattttt accaccacgt tgttcgccac
     3001 ctacccaagg gatgcctttt tcagcatctt ttttatccat tttcttcttg gctgccattg
     3061 catcaggctc tgtttcagca atttcagcgg ctcggtgtaa tccggccatc tttgctaatt
     3121 tactgtccat tgctaaatca gcaagttggt tagacatggc ttcgcaactg gttttgaagt
     3181 tgttgaagtc aagttttcct tgatatagac cattagaaag aatgtcatac agttgaggat
     3241 ttgctcgttg gataatcatc gccgggaggc tggcaactgc accggttgct gactcaataa
     3301 tattgccata aagatcttta aaaccttcag taataccatt aagctggttt ttaatggaaa
     3361 gtttaatatc aaagttgcca caagttaaat tcgatttcca gccaatgcca atcccatatt
     3421 gatttggtct gccacgggaa gctggtgcgg aaatggcact acctcctcca atggagtagt
     3481 gcatataatc agaaaggaca gggtagtatt ccgtgagagc gttattacca gaaacgccta
     3541 gattaccagt cctatagcct gttgtatttt caataaaatt actaatgcta ttgccaacat
     3601 taacggtatt actatttgcg tatccgctca tggttgtgag cattatacaa gcggttagaa
     3661 atttgagact ttttgctttt ttcatttatt tatcctaata gtgctgataa tttaatgagt
     3721 atgtgtactt ttccagtcca catgacctaa aaaaacttgc ccttgttttt tacagcaaga
     3781 atagggcctc cataatgccc agctgtaatt ctcagtattg gagaaactat ctgaatgggt
     3841 agcccaatca ccactgtgcg gaaagacttt agggtaggat tcggaagtaa ataccttaac
     3901 tgttacatct gagggtttat tagcaggact agcacttgcc atagctgaaa gcagtagtag
     3961 tggtaaatag taaaatgtct tagcttgcat aaatgctcca caaatagagt aattcacgtt
     4021 taccttaaaa gatgatttgg ttagaagaaa tcggaaattg ttttttggtt ttggagagtt
     4081 tttgttagta tataagttaa tgtaacaagg gagagtggat gtatgagcaa tagaatacct
     4141 aaagcctgtt atgcttaccc aaaatcgccg aacaacccgt ttaatagatt gtcggttatc
     4201 aatctatacc agccgaaatg tctcccagca ttctgaaagg gaactctgta aaattacagg
     4261 aatgccacct aaacaataaa tggataatgc cagccacttt atccgttgta ttttgtcaca
     4321 tgcgtgattg caatgtcata atattacccg acttggggat attatgacat tgcaatcatt
     4381 gctcactttt ct
//
LOCUS       DANMCL010000131         4322 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.134, whole genome shotgun sequence.
ACCESSION   DANMCL010000131 DANMCL010000000
VERSION     DANMCL010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4322
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.134"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1236)
                     /locus_tag="PXF40_002552"
     CDS             complement(<1..1236)
                     /locus_tag="PXF40_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL5803827.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRV"
     gene            complement(1348..1653)
                     /locus_tag="PXF40_002553"
     CDS             complement(1348..1653)
                     /locus_tag="PXF40_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5803828.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            complement(1681..2895)
                     /gene="floR"
                     /locus_tag="PXF40_002554"
     CDS             complement(1681..2895)
                     /gene="floR"
                     /locus_tag="PXF40_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL5803829.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            complement(3172..3618)
                     /locus_tag="PXF40_002555"
                     /pseudo
     CDS             complement(3172..3618)
                     /locus_tag="PXF40_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            complement(4087..>4322)
                     /locus_tag="PXF40_002556"
     CDS             complement(4087..>4322)
                     /locus_tag="PXF40_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5803830.1"
                     /translation="QRRASMTWAQRLKRVFNIDIETCSGCGGAMKVIACIEDPIVIKQ
                     ILDHLKHKAETSGTRALPESRAPPAELLLGLFD"
BASE COUNT          916 a         1333 c         1248 g          825 t
ORIGIN      
        1 caccctgacc ttgttgcccc tgccccgttt tgccggcgtg accaacgccc ggtgccgact
       61 gttgggtgcg aacaccccgt ggaagcgggt taggttgact ctgggcttcg gtaccagggc
      121 ggccagcctt gcaatgaaat ccaatggttc gaaaatgacg tgcgtggtgc cgtcccggta
      181 cggcgtcttg agctggtagc gcacgttgcc gcctcgtgtt aacgacagcc gcttctcgga
      241 taccgccggg cggctgatgt accggcacag ccgttcgagc ttcttgcgtt catcggccct
      301 ggccgccacg ccggcgtgca ggctggaccc ggctaccttg ccaatcccgt caccgaacgg
      361 atcaccactg gtcggcagag tttgcaaagt gaacaccttt cgccccgcct gtgaaccgac
      421 agcgatacgg taagtgatcg agtgccccag caggggtgtc atcgggtcgt catccaccgc
      481 atccgaggcc agatagctgt tttcgacatc ccgttccagc aggccttgcc gttccagata
      541 gcgacccacc cggtgggcga tggtgtgcgt cagctgggtg agctctgggc tggtcggcgc
      601 cttgacccag cggaaacgcg ctgagccgtg ggattgctcg acatacacac cgtcgagaaa
      661 cagcatgtgg aagtgaacat tcagattgag cgccgatcca aaacgctgga tcagggtgac
      721 cgcgcccgtc ttggccactt ggtgggtatg gcccgctttc ttgaccaggt gcgtggcaat
      781 gacgcggtaa acgatgccca gcacccaccc catgatctcg ggccggctgg caaacaggaa
      841 acgcagctga aacgggaagc tcaacaccca ctgacgcatg ggttgttcag gcagtacttc
      901 atcaaccagc aaggcggcac tttcggccat ccgccgcgcc ccacagctcg ggcagaaacc
      961 gcgacgctta cagctgaaag cgaccaggtg ctcggcgtgg caagactcgc agcgaacccg
     1021 tagaaagcca tgctccagcc gcccgcattg gagaaattct tcaaattccc gttgcacata
     1081 gcccggcaat tcctttccct gctctgccat aagcgcagcg aatgccgggt aatactcgtc
     1141 aacgatctga tagagaaggg tttgctcggg tcggtggctc tggtaacgac cagtatcccg
     1201 atcccggctg gccgtcctgg ccgccacatg aggcatgttc cgcgtccttg caatactgtg
     1261 tttacataca gtctatcgct tagcggaaag ttcttttacc ctcagccgaa atgcctgccg
     1321 ttgctagaca ttgccagcca gtgcccgtca ctccgcggtc ttcactgcgt gatcgagttg
     1381 atcgacaccc gccgtgacac gctccatgaa gtgcctgcct gcgtctgtta gccgaacgcc
     1441 ccgcgcatgg cgctcaaata gcaggacacc aaggttatcc tccagcgctt tcacacgcgc
     1501 gctgacgctc gactggctga taccaagtgc cttggccgca tgccgaaaat tcagatgctc
     1561 ggcgacggcg atgaactgaa caagggaaat gagcggtatc ctgccagaca ggataccgac
     1621 attcacgagg tttcgatggt tagtgcgccg catcggagcg ggcctgctac cagtcgtcgg
     1681 ttagacgact ggcgacttct cggtggcagc cccacggagc cgaaggagca ccagccccaa
     1741 cgaaaccagt accgccatcg ccgtggcgta acagatcacg ggccacgctg tgtcactgtt
     1801 taaaagtgcc accgccaatg tcccgacaat gctgactatc aggctttgaa cgcagaagta
     1861 gaacgcgacc gctgatcccg cgatgtcgtc gaactctgcc aaagcgccgt tcgcggtaac
     1921 ggacaccgtg aagacaatac cgaccgcgac aacccacatc ggtaggatga aggtgaggaa
     1981 tgacggcgag ccgtaaagtt cgccgatccc caacaggacc gctccgcaaa caagcaacgc
     2041 catcccacgc gccacgcatc ctgcgatgcc ccatctggcg acaaaggact tcgcgaaacg
     2101 ggttgtcacg atcattacaa gcgcgacagt ggcgaaggca aagctgaatc cgatctcgga
     2161 atattccgct tggcctatga gcacacgggg agccgtcgag aagaagacga agaaggtgcc
     2221 cataccggcg ctaaagccga cagtgtaaac ccaaaaagcc ggactcgcga agatcggcaa
     2281 gacagatcgg cgcgtcttga cttgatccag agggcgggtt tcgtgccacc tgaaacccgc
     2341 atttaggagt gcgagcatcg ccagtatagc caaagtaatg aatatcgcct gccatcccaa
     2401 gaactcgccg atcaatgctc cggcgatagg gccgagcgca ggcacgaacg ccagcaccga
     2461 actgaaaagg ccgtagatga cgacaccctc aggacggttg gcataaacgt cgcgaaccgt
     2521 cgcgaacgtc gccaccagca tggccgacgc gcccactgct tgaagtagac ggaaagcgac
     2581 aaaggccggt gcagttgaag accaagctgc tcccagagac gcaatgacga aagccgttgc
     2641 gcccgcaagt agaattggcc gtcgcccgat tctgtctgag agcggaccaa aaatcacctg
     2701 gcccacgccg agcatcacca tatagaggct caacgtgagt tggatcatag cgggcgtcgt
     2761 gttcaggatg ccgggcatcg ctggaacgac agggagataa atatccatcg ccagtgaagc
     2821 gaggatgtcg aaaggagcca tcagcagcag tgctgccggc agcgtatagg cccacgcggg
     2881 gcgtgtggtg gtcatgaata tgatctcctt gcgattgata tttgtttagg cccacgcggg
     2941 gcgtgtggtg gtcatgacga atcaaccctc gattaaggaa taccgggcga cgtctgctcg
     3001 tcagcaatca gatgagacta gccttacaga gcgccgcaac aacaatactg gttgttgcgg
     3061 cttacttgtc tgctgacttg gaatttccca tctgattact ccacgcttac gaatatgaat
     3121 tgctacattt tatccgatta tcttttgctt cgcaatgcgg catgggcgca ctcagcgttc
     3181 cagccccctc tgccgcccta actgccacga caccgacccg ccctgcacga tgcccataac
     3241 ctcgcggccg agttggcggt cgatgatcgg ccgccacggg acaagggtga actcatggga
     3301 tttctcgacc acggcgaact tgccgctcga tagatgcacg gttccggtaa acttgccgct
     3361 gacgctctcg ccgtccgtgg cggcgcggaa cggcaggccc ttactcaaag ccatatccga
     3421 tccgacgccg gctacctcgc gctcccgcag gatggcgaga aggttgcgcc ggtagaagac
     3481 gcggctgtcc cggctgcggg tggcgtcgcc ctgttcgata tggtgctcgc ggcgctggtc
     3541 catggcttcg cggacttgtt gcccgaagcc ggttggcgca aggtcggccg tctcgccgtg
     3601 gatcagccgc cggtccagcc aggtcgcgcc gtccgatccg atctgtttgt tcagatcgac
     3661 cggggaaagg acgcgaacgc tggcctgact gtctcggccg gcgtcatggg cggcggcacg
     3721 gctgaccaga tcatcgggga tgcgccattg gtcggcgtcg atccgctcga cgataccggc
     3781 ccggcgtagc gcctccagcc ggcgcacatg ggcatcgaca tagccctcat agtcgccgcc
     3841 tggaacgcgg cacgtatagg aagaataaac gcccttttca cccaagtcca acagctttgg
     3901 accgcagttg actctttcga cacccctgcg atgcaaccca atccggctga cggggagcca
     3961 gcaacgctga aaatttaccc tcctctttcc cactagcggc tccttttccg acaaccagca
     4021 cggcggatcc ctgccgcggc gctgtgaacg cagcattttg attggtatcg ttggccttca
     4081 ggctcgtcag tcaaacagac ccaggagcag ctcagccggt ggcgcccggc tttcgggtaa
     4141 cgccctggtc ccgctggttt cggctttgtg cttcaggtga tcaaggatct gcttgatcac
     4201 tatagggtct tcaatgcagg cgatgacttt catggcgccg ccgcagccgc tgcaggtctc
     4261 gatgtcgata ttgaaaacac gcttgagccg ttgcgcccat gtcatcgacg ctcgccgttg
     4321 tg
//
LOCUS       DANMCL010000132         4236 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.135, whole genome shotgun sequence.
ACCESSION   DANMCL010000132 DANMCL010000000
VERSION     DANMCL010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4236
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.135"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(3..1409)
                     /locus_tag="PXF40_002557"
     CDS             complement(3..1409)
                     /locus_tag="PXF40_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HDL5803831.1"
                     /translation="MKLTKIVLSVVAVIGAVAVGGSWYTGKQVEEKYQELVVQANNQL
                     KQLSGEFGANIELKDVQIDRHFFISNAKYRLEVDLGNGKKLDFVGNDKLHHGPLPLNR
                     LAKLNLAPVMMSAESKLQAPEALKKLMGEHIGTGFSNISYSGDVEGHFDISPIKHSDE
                     TGHIETTPIKVQYSYDQKLKGVDSTVELESLKIKAEEFDFQIQGIVYDVQTENNESYP
                     NLTLGKGSGKINAIEFKSKDGKLSQIKDVVVKGDNLLKGDRLISTGDLEAATFNIEGV
                     EMGKLKMDMAYDLDAKLTNDITPLLSNPQTLENEKTGELLLQLLAKSFKFHINNFSLE
                     NSKGKVDLALLLNMAQFDPQNLGNMQAVLQALSTSKFTSNINRQYAEDIIRQVSIVTE
                     KLGEEEAKAFAKQQVDAVFLNAGVEQYGLRKVDDNNVKIELTIDNGKVNLNGRELTED
                     ELQMALFMIVMGAGSLGQ"
     gene            complement(1459..2265)
                     /gene="trpA"
                     /locus_tag="PXF40_002558"
     CDS             complement(1459..2265)
                     /gene="trpA"
                     /locus_tag="PXF40_002558"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005603844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HDL5803832.1"
                     /translation="MSRFDTLFTALKAKNEGAFVPFVTLCDPGFERSFEIIDTMIKNG
                     ADALELGFPFSDPLLDGPVIQAANKRALDGGYSTDSCFELIAKIRAKYPDIPIGLLLC
                     ANLIFVPTAEVFFQRCQQSGVDAVLIADLPVFAAQEFVPTAEKYGIQPVFICPPNADQ
                     NTIERIAQLTQGYTYLVSRAGVTSAENQAHASNLDNLVESLKQAGAAPILQGFGIAKP
                     EQVKEALRLGADGAISGSAIVKIIERNLADQANLLKELAEFVQVMKAATK"
     gene            complement(2267..3457)
                     /gene="trpB"
                     /locus_tag="PXF40_002559"
     CDS             complement(2267..3457)
                     /gene="trpB"
                     /locus_tag="PXF40_002559"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HDL5803833.1"
                     /translation="MSDTLLNPYFGEFGGMYVPEILVPVLKELEQAFVDAQQDPTFQA
                     EFADLLKNYAGRPTALTLCRNLTKGSKTKLYLKREDLLHGGAHKTNQVLGQILLAKRM
                     GKTRIIAETGAGQHGVATALACAMLGMPCVVYMGAKDVERQSPNVFRMRLMGAEVIPV
                     QKGSCSLKDACCEAMRDWAANYDTTHYLIGTAAGPHPFPTMVREFQKMIGEEIKRQIL
                     AKEDRLPDAVIAAVGGGSNAIGMFADFIEEQSVKLIGVEPAGKGIETGEHGAPLKHGT
                     TGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNATGRAEYVSITDAEAL
                     EAFQALAKNEGIIPALESSHALAYALKMIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL
                     NGGE"
     gene            complement(3469..4221)
                     /locus_tag="PXF40_002560"
     CDS             complement(3469..4221)
                     /locus_tag="PXF40_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HDL5803834.1"
                     /translation="MKIALVTGVTAGFGLAICKLLLQSGYKVIGTGRRAERLEELHLQ
                     FGDKFLPLAFDIQQPDEVEKALNSRPKAWQQIDLLVNNAGLALGLEPAQKADLNDWYQ
                     MIDTNIKGLVTMTRLVLPEMVERKSGHIINIGSIAGTYPYPGGNVYGGTKAFVKQFSL
                     NLRADLAGTKVRVSNVEPGLCGGTEFSNVRFKGDDEKAAKVYENVQFVRPEDVANIVL
                     WLNQQPEHVNINRVEVMPVAQTSSALNVARNI"
BASE COUNT         1165 a          990 c          754 g         1327 t
ORIGIN      
        1 gattattgcc cgagtgagcc tgctcccatc acaatcataa acagagccat ttgaagttca
       61 tcttcggtca gttcacgtcc gtttaaattc acttttccgt tatctatagt taattcaatc
      121 ttcacattgt tgtcatctac ttttcttaat ccgtactgtt caactcccgc attgagaaaa
      181 acagcatcaa cttgttgctt ggcaaatgct ttcgcctctt cttcgcctaa tttttctgta
      241 actattgaga cttggcgaat aatatcttcc gcatattgac ggttgatatt tgaagtgaat
      301 ttacttgttg aaagggcttg caataccgct tgcatattac caagattttg tgggtcaaat
      361 tgagccatat tcagtaataa agccaaatca actttgcctt tgctgttttc aagtgagaaa
      421 ttattaatat ggaatttaaa tgattttgct aatagttgta ataataactc gcctgttttt
      481 tcattttcta atgtttgagg attagataat aaaggcgtaa tatcattggt taatttagca
      541 tctaaatcgt atgccatatc catttttaat ttacccattt caacaccctc aatgttgaaa
      601 gtggctgcct ctaaatctcc ggtagaaatt aaacgatcgc cttttaatag attatcgccc
      661 ttcaccacaa catctttaat ttgagataat ttgccatctt tagacttaaa ctcaatagcg
      721 ttaatttttc cactaccttt gcctaaagtt aaattaggat aactttcatt attttctgtt
      781 tgaacatcat aaactatacc ttgaatttga aaatcaaatt cttctgcttt tatcttaaga
      841 ctttctagct caacagtgct atcaacccct tttaattttt ggtcgtagct atattgcact
      901 ttgattggcg tggtttcaat atgacctgtt tcatcactat gtttaatcgg ggaaatatca
      961 aaatgccctt ccacatcgcc cgaatagctg atattagaaa aaccggtgcc aatatgttca
     1021 cccatcaatt ttttaagggc ttcaggagct tgtaatttgc tttccgcact catcattaca
     1081 ggagctaaat taagtttcgc taaacgatta agcggtagcg gaccgtgatg aagtttatca
     1141 ttaccaacaa agtccaattt cttaccatta cccaaatcca cttctaaacg atatttcgca
     1201 ttagagataa agaaatggcg atcgatctgc acatctttaa gctcaatatt cgcaccaaat
     1261 tcgccactca gttgtttaag ttggttatta gcttgaacaa ccaattcttg atatttttct
     1321 tcaacctgct tacctgtgta ccaacttccg ccaactgcaa cagcaccaat taccgctaca
     1381 actgaaagaa caatttttgt taatttcatt ctgtttcctt ttattttcaa aaaaatttaa
     1441 aaaatgaccg cttgtagttt acttcgtagc cgctttcatc acttgtacaa attcggcaag
     1501 ttctttgagc aaattagctt ggtcagctaa attacgttca ataattttca caatcgctga
     1561 gcctgaaatc gccccgtctg ccccaagcct taacgcctct tttacctgtt caggtttggc
     1621 tatgccaaaa ccttgtaaga taggggcagc tccggcttgt tttaaacttt ccactaaatt
     1681 atccaaatta cttgcgtgag cttggttttc agcactagtt acaccggcac gggaaactaa
     1741 ataagtgtag ccttgggtta attgagcaat ccgttcaatg gtgttttgat cagcattcgg
     1801 cgggcaaata aacaccggct gaattccata tttttcagcg gttggcacaa actcttgagc
     1861 agcgaaaaca ggcaaatcag caatcaacac cgcatcaact ccactttgtt ggcaacgttg
     1921 gaaaaatact tctgcggttg gcacaaaaat taaattggca cacagtagta aaccgatagg
     1981 aatgtctgga tatttagctc gaattttggc aatcagctca aaacagctat cagtgctata
     2041 gccaccatct aaagctcgtt tattcgctgc ttgaatcacc ggcccgtcta agagggggtc
     2101 agaaaacgga aagcctagct ctaaagcatc agccccgttt ttaatcatcg tgtcgataat
     2161 ctcaaaactg cgttcaaaac caggatcgca taatgtcaca aacggcacaa aagccccttc
     2221 gttttttgct tttaatgcag taaatagcgt atcaaagcgg ctcattttac tctcctccat
     2281 ttaaaatttt atccacggtg aaaatgtctt tatcgcctcg acccgataaa ttcaccacta
     2341 ataactgctc tttttcaggg ttctgcttaa tcatttttaa cgcataggct aaggcgtggg
     2401 aagattctaa cgccggaata atcccctcat ttttggctaa tgcttggaat gcctctaaag
     2461 cctctgcatc ggtaatcgat acatattcag ctcgccctgt cgcatttaaa taagcgtgtt
     2521 gcggcccgac agaagggaaa tctaagccgg ctgaaatgga gtaagactct tcaatttgcc
     2581 cgtctttatc ctgcataatc ggcgatttca taccgaaata gatccccgtt gtgccgtgtt
     2641 tgagcggtgc accgtgttca ccggtttcaa ttccttttcc tgccggctca acaccgatca
     2701 atttgacgga ttgctcttcg ataaaatctg caaacatacc gatagcattt gagccaccgc
     2761 ctacggcagc aatcaccgca tcaggcaagc ggtcttcttt tgctaaaatt tgacgtttga
     2821 tctcttcgcc aatcattttc tgaaattcac gcaccattgt cgggaacggg tgcgggccgg
     2881 ctgcagtgcc gattaggtaa tgggtagtat cataatttgc cgcccaatcc cgcattgcct
     2941 cgcaacaggc atctttgagc gagcaagagc ctttttgtac cggaatcacc tccgctccca
     3001 ttaaacgcat acggaataca tttggcgatt ggcgttctac atcttttgcg cccatataca
     3061 ccacgcaagg cattcctaac atcgcacacg ctaatgcggt tgccacaccg tgctgtcctg
     3121 ctcctgtttc ggcaataatg cgggttttac ccattcgttt agcgagtaag atttgcccta
     3181 gcacttggtt ggttttatgt gccccaccgt gtaaaagatc ttcacgtttt aaatagagtt
     3241 tggttttact gcctttggtt aaattacgac aaagggttaa agcagtcggg cgaccggcat
     3301 agtttttgag taaatcggca aattcagctt ggaatgttgg gtcttgctga gcatctacaa
     3361 aggcttgttc taattctttt agcaccggca ctaaaatttc cggcacatac ataccaccaa
     3421 attcaccaaa ataaggatta agaagtgtgt ctgacataat atttcctttt aaatatttct
     3481 cgctacattt aaggcagaag aagtttgagc caccggcatc acttcaaccc gattaatatt
     3541 aacgtgttca ggttgctgat tcagccaaag cacaatattt gccacatctt ccgggcgcac
     3601 aaactgcacg ttttcataaa ctttagccgc tttttcatca tcgcctttaa agcgtacatt
     3661 tgaaaattcc gtaccgccac atagccccgg ctcaacattg gaaacacgca ctttagtgcc
     3721 ggctaaatct gcccgcaaat ttaggctaaa ctgtttcacg aaggctttag taccaccata
     3781 tacattaccg cccgggtaag ggtaagtgcc ggcaatcgag ccgatattaa taatatgccc
     3841 acttttccgc tccaccattt caggcaaaac taagcgtgtc atcgttacca atcctttaat
     3901 attggtatcg atcatttgat accaatcgtt caaatctgct ttctgtgccg gttctaagcc
     3961 gagtgcaagg cctgcattgt ttactaataa atcaatttgt tgccacgctt tagggcggct
     4021 attcagtgct ttttccacct catcgggctg ttgaatatca aatgcaagcg gtagaaattt
     4081 atcgccaaat tgtaaatgca gttcttctaa acgctctgcc cgtctgcccg tgccaattac
     4141 tttataaccc gattgaagca ataatttaca aattgccaac ccaaatccag cagttactcc
     4201 tgtgactaat gctattttca tcttttcacc ctcaaa
//
LOCUS       DANMCL010000133         4157 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.136, whole genome shotgun sequence.
ACCESSION   DANMCL010000133 DANMCL010000000
VERSION     DANMCL010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4157
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.136"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..1592)
                     /locus_tag="PXF40_002561"
     CDS             complement(<1..1592)
                     /locus_tag="PXF40_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5803835.1"
                     /translation="MKKKQQYRKSTINNTNASQQNSGEVLNSVNYQTLLEDYLNKISF
                     SNRQFIDELKTEHNKKLKELENKVSSLEQTNHVQQQDISRLNILLEQKNIEENRNLER
                     MISYQLGYALINACKSFSGFISLPSELLKIRKLAKDKKQQKLLPSSPVANTPKQQTAL
                     VTSAPARSQSIDLTRGLTLLDPISELCWADAFTGYPLVRKSYADHIAGSTCKFAFFES
                     AWQANKGSWIYAFTSPGLKHNNAQALLDAIQKLKDKSIPIIFWNKEDPMHYEMFKPIA
                     EKVDYVFTTDQLVVDKYKKELGHSNIWALPFAAPIKVTNPIGRFSLDTETVCFAGTYY
                     AQNHENRKKQMDMLLPALLAYNGCIYDRASKDTSGKYAYPEQYTHLIREGVNFNEIVK
                     LYKKFKVFLNVNTITQSTTMMSRRVYELLASGTPVVSTPSKAITAQFPGIVITVNNEK
                     EAELAVHKLLTDSYYWHKQSMLGIREVMSKHTYENRWEFACSVINNEPIKEKTPSVRI
                     IAVYHNYLDLAIYIDSLIHQNNV"
     gene            complement(1596..2867)
                     /gene="wecC"
                     /locus_tag="PXF40_002562"
     CDS             complement(1596..2867)
                     /gene="wecC"
                     /locus_tag="PXF40_002562"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HDL5803836.1"
                     /translation="MSNFNTISVVGLGYIGLPTATVFAQHGLNVIGVDVNQHAVDHIN
                     QGKIHIVEPDLDVAVHQCVSSGKLKATLTPEPAEAFLIAVPTPFKGEDYEPDLSYIQA
                     ACKAIAPVLEKGNLVILESTSPVGATEQMAEWLAEYRPELSFPQQAGEDSDIRIAHCP
                     ERVLPGQVMHELIENDRIVGGMTNKCSVQAVNLYKTFVKGDCIVTNARTAEMCKLTEN
                     SFRDVNIAFANELSIICDRLDINVWELIALANRHPRVNILQPGCGVGGHCIAVDPWFI
                     VNKTPDLAKIIRTAREVNDHKPEWVISKMNEAVIYALQKTGKSIDQIKIACLGLAFKP
                     DIDDLRESPALKITEKLAEKYPNQVFAVEPNVEELPKKLANKNISLISVDEALEVADV
                     VVVLVDHSEFKLVKPVFLNDICVVDTKGIWR"
     gene            complement(2882..3997)
                     /gene="wecB"
                     /locus_tag="PXF40_002563"
     CDS             complement(2882..3997)
                     /gene="wecB"
                     /locus_tag="PXF40_002563"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015703970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HDL5803837.1"
                     /translation="MRYLIVFGTRPEAIKMAPLVEGFKKSGLNFKVCVTAQHRQMLDQ
                     VLELFEITPDYDLDIMSNKQTLSTVTSAILEKIQPVIAEYKPTTIFVHGDTATTLASS
                     LAAYYNQIDIAHIEAGLRTHNIYSPWPEEGNRKLTAALAKYHFAPTQSTKKNLLNENI
                     AEGTIYVTGNTVIDALFLACKKLDENIDLLSSLQEKFSYIKSKRTILITGHRRENFGN
                     GFENICKAVSTLASDFPDVQFIYPVHLNPNVREPVNRLLADKSNVHLIEPCDYLSFVY
                     LMRESYLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVEAGTVKLVGTAQSEIIKQV
                     TELLNDQAAYTKMSEAHNPYGDGTAVKQILSVFQSKQ"
BASE COUNT         1240 a          766 c          746 g         1405 t
ORIGIN      
        1 acattatttt gatgaattag agaatctata tagatagcta aatctagata attatgataa
       61 accgcgataa ttcgaacact aggtgttttt tcctttattg gttcattatt gattacacta
      121 cacgcaaatt cccaacgatt ttcataagta tgttttgaca ttacttcacg tatgcccagc
      181 atggactgct tatgccaata atagctatct gtcagtaatt tatggacagc aagctcagct
      241 tctttctcat tatttacagt aataacaatg ccagggaatt gtgccgtaat agctttagat
      301 ggcgtagata caacaggtgt gccgctagct agaagttcat acacacgtct tgacatcatt
      361 gtggttgatt gagtgatggt attaacattt aaaaatactt taaatttctt atacaactta
      421 actatctcat tgaaatttac cccttctcgg ataagatgag tgtattgttc aggataagca
      481 tatttgccac ttgtatcttt agatgctcta tcataaatac agccgttgta agccaataat
      541 gcaggtaaca acatatccat ctgtttttta cgattttcat gattttgagc ataatatgtt
      601 ccagcaaaac aaactgtttc tgtatcaaga gaaaatctgc caattggatt ggttacttta
      661 attggggcag caaaaggcaa agcccaaata tttgaatgcc caagttcttt tttatattta
      721 tctacaacca attgatctgt tgtaaaaaca taatctactt tttctgcgat tggcttaaac
      781 atctcataat gcattggatc ttctttattc caaaaaatga taggaatgct tttatctttt
      841 agtttctgaa ttgcatctaa caatgcttga gcattattat gttttaagcc tggtgaagta
      901 aaagcataga tccatgaccc tttatttgcc tgccaagcac tttcaaaaaa agcaaattta
      961 cacgtgctgc cagcaatatg atcagcataa gattttctaa ctaaaggata ccctgtaaag
     1021 gcatctgccc agcataattc agaaatagga tccagtagtg tcaatcctct tgtcaagtca
     1081 atagattgag atcgggcagg tgcacttgta actaatgcag tctgttgctt tggtgtattt
     1141 gcaacagggg aagatggcaa taatttctgc tgtttcttat ccttagctaa cttcctgatt
     1201 tttaataatt ctgaaggcaa ggatataaaa ccactaaatg atttacaagc gtttattaaa
     1261 gcatatccta actgataaga aatcattctt tcaagatttc tattttcttc aatgttcttt
     1321 tgctctaaca aaatatttaa tctggatatg tcttgctgtt gaacatgatt agtttgctca
     1381 aggctgctta ctttattttc tagctccttg agctttttat tatgctcagt tttcagctca
     1441 tctataaact gccgattact aaaactaatt ttatttaaat aatcttccag taatgtttga
     1501 taattgacag aatttaatac ttcgcctgaa ttttgttgtg atgcattagt attgttaata
     1561 gtggatttac gatattgctg tttctttttc atcacttatc tccaaattcc tttagtatcc
     1621 accacacaaa tatcattcaa aaacacaggt ttgactagtt taaattcgct atgatccacc
     1681 aaaacaacta caacatcagc tacttccaga gcttcatcaa cagaaatcaa agaaatgttc
     1741 ttgttagcca attttttcgg tagctcttca acattcggct caactgcaaa tacttgattt
     1801 ggatactttt ccgccaattt ttcagtaatt tttaatgccg gactttcacg caaatcgtca
     1861 atatcaggct tgaatgccaa ccctaaacaa gcaattttga tttgatcgat agatttacct
     1921 gttttttgta aggcataaat taccgcttca ttcatctttg agataaccca ttcaggttta
     1981 tgatcgttta cctcacgagc agtgcggata atttttgcca agtcaggagt tttattcaca
     2041 ataaaccaag gatctacagc aatgcagtgt ccacctacac cacaacccgg ttgtaagata
     2101 ttgactcgag ggtgtctgtt agccaaagca attagttccc atacattaat atctaggcga
     2161 tcacaaataa tagaaagctc atttgcaaaa gcgatattga catcacggaa actattttcg
     2221 gttaatttac acatttctgc ggtacgggca ttggtaacta tacagtcgcc ttttacaaaa
     2281 gttttgtata aattgaccgc ttgcacagag catttatttg tcataccacc cacaatacgg
     2341 tcgttttcaa tcaattcatg catcacttgt cctggtagaa ctcgttctgg gcaatgggcg
     2401 atacgaatat cagaatcttc acctgcttgc tgagggaagc ttagctctgg acggtactcg
     2461 gcaagccact cagccatctg ttctgttgca ccaaccggag aggttgattc taaaatgact
     2521 aaattacctt tttccagcac aggtgcaatt gctttgcaag cagcttgaat ataacttaaa
     2581 tcaggctcat aatcctcgcc tttaaaaggc gttggtacag caattaaaaa tgcttctgct
     2641 ggttcaggtg tcagtgtggc ttttaatttt ccgctagata cacattggtg aacagcaaca
     2701 tctaaatcag gctcgacaat gtgaattttc ccttgattga tatggtctac ggcgtgctga
     2761 ttaacatcta cgccaattac atttagaccg tgttgggcaa atacagtggc ggttggtaag
     2821 ccaatatagc ctaagcctac tactgaaatg gtattaaagt tcgacataca tttatccctt
     2881 attattgttt tgattgaaat actgagagaa tttgtttcac agctgtgcca tcgccataag
     2941 ggttgtgagc ctcagacatt tttgtataag cagcttgatc attgagtaac tcagtaactt
     3001 gtttaataat ttcagattgt gcagttccaa caagttttac tgttccggct tctacagctt
     3061 ccggtctttc tgttgtgtct ctcattacta ataccggttt tcctaatgat ggggcttctt
     3121 cttgaatacc tccggagtca gttaagataa ggtaagactc tctcattaaa taaacaaagg
     3181 agagatagtc gcaaggctca atgagatgca cattggattt atccgctaat aggcgattga
     3241 ccggttctct tacatttggg ttgaggtgta cggggtagat aaattgaacg tcagggaaat
     3301 cagacgctaa tgttgaaacg gctttacaga tgttctcaaa accattaccg aaattttcgc
     3361 ggcgatgtcc ggtgatcaaa atagtacgct tactttttat ataagaaaat ttctcttgta
     3421 gcgagcttaa taaatcaata ttttcatcta attttttgca agcgaggaat aaggcatcaa
     3481 ttaccgtatt acccgttaca taaatggtgc cctcagcaat attttcgttg agtagatttt
     3541 tcttggtgct ttgtgttggt gcgaaatggt attttgccaa agcagctgtt aatttgcgat
     3601 tgccttcttc cggccaagga gagtagatat tatgcgttct tagacctgcc tcaatatgag
     3661 cgatatcaat ttggttgtaa taggctgcta atgaagaggc aagagtggtt gctgtatcgc
     3721 catgaacaaa aatagtagtt ggtttgtatt cggcaataac aggttgaatt ttttctaaaa
     3781 tagcagaagt tacagtagaa agtgtttgct tattgctcat aatatccagg tcataatctg
     3841 gagtaatttc gaataattct aaaacttggt ccagcatttg gcggtgctga gcagtaacac
     3901 agactttaaa atttagaccg cttttcttaa agccctcaac taagggagcc attttgattg
     3961 cctcaggacg agtaccgaag acgatgagat agcgcattta ttactccttt aaaaatatag
     4021 ataaaactaa aatacactag atgtaagtaa ttttgttaaa ttagttataa agatcgtgtt
     4081 cattataatg tttttatgga gttaggtgta taaaaacttt tactttgtag atattttatg
     4141 taaattcttg taagtat
//
LOCUS       DANMCL010000134         4127 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.137, whole genome shotgun sequence.
ACCESSION   DANMCL010000134 DANMCL010000000
VERSION     DANMCL010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.137"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXF40_002564"
     CDS             complement(230..1870)
                     /gene="pgi"
                     /locus_tag="PXF40_002564"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HDL5803838.1"
                     /translation="MQKINPVQTFAWNALEQHKADNLSIPQLFAEDPNRFDKYSLRFE
                     DQLLVDFSKNAINEKTLTLLRQLANECGLESAKNAMFSGKKINRTENRAVLHVALRNR
                     ANTPIAVDGKDVMPEVNAVLAKMKDFCERVISGEWKGYTGKTITDVINIGIGGSDLGP
                     YMVTEALRPYKNHLNMHFVSNVDGTHIAEVLRKVNPETTLVLVASKTFTTQETMTNAL
                     SARKWLLDSAKDESAVAKHFVALSTNAKEVEKFGIDTANMFEFWDWVGGRYSLWSAIG
                     LSIALSLGFENFEQLLAGAHAMDKHFLITPIEKNIPTTLALVGIWNNNFLGAESEAIL
                     PYDQYMHRFAAYFQQGNMESNGKFVGRDGKPVTHQTGPIIWGEPGTNGQHAFYQLIHQ
                     GTKLIPCDFIAPAQTHNPLSDHHNKLLSNFFAQTEALAFGKSKETVEKEFLDAGKTLE
                     EVAEIVPFKVFSGNKPTNSILVQKITPYSLGALIAMYEHKIFVQGVLFNIYSFDQWGV
                     ELGKQLANRILPELETDEKINSHDSSTNGLINQFKAWR"
     gene            complement(1903..2151)
                     /locus_tag="PXF40_002565"
     CDS             complement(1903..2151)
                     /locus_tag="PXF40_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HDL5803839.1"
                     /translation="MLTPKNLEAIAQQLHNALPQSLKNVGNDLDEKFKQILQAQLARL
                     DVVTREEFDVQSQVLLRTREKLTELEKRLDELTQRTDE"
     regulatory      2275..2319
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            2323..2991
                     /gene="queC"
                     /locus_tag="PXF40_002566"
     CDS             2323..2991
                     /gene="queC"
                     /locus_tag="PXF40_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HDL5803840.1"
                     /translation="MTHQKPKAVVIFSGGQDSTTCLFQAIAEFGKENVEVVTFQYGQR
                     HSIELEKARWISNDLGVKQTLIDTSVIKAITTNALMDNNAEIQQQGSTPNTFVDGRNA
                     LFLLYTAIYAKGQGIQTIFTGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYNFNIRTP
                     LMYLTKKETWALADKLGAFDYIRDHTHTCYLGVEGGCHDCPSCVLREKGLNEYLAERE
                     VSNV"
     gene            2984..3406
                     /gene="queD"
                     /locus_tag="PXF40_002567"
     CDS             2984..3406
                     /gene="queD"
                     /locus_tag="PXF40_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005597968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HDL5803841.1"
                     /translation="MFKIAKEFSFDMAHMLDGHDGKCQNLHGHTYKLQVEVAGELFQE
                     GAKRGMVMDYSDLKAVVKQHILEPMDHAFIYDLQSERESQVAQLLIDLNSKVYGIPTR
                     TTAEEMAKYMFEKLEKVGLPVSLIRLWETPTSYCEYSK"
     gene            3406..4032
                     /locus_tag="PXF40_002568"
     CDS             3406..4032
                     /locus_tag="PXF40_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HDL5803842.1"
                     /translation="MAELISNPRFPIVEIFESLQGEGFNTGMPAIFVRFGKCNLTCPW
                     CDTNYNQFEQWTLSDILAKVRSYSAKNVIITGGEPTIQPNLSLLLEQFKKEGYFLAIE
                     TNGLKEVPAQIDYIATSPKRMYQEKYQRRCIEFANEVRIVVDGEVQGFCEQIESQIKA
                     EHYYLSPCEVEGKMNLLETITQIGLLNQRPNKPKWQLSIQTHKIVGIE"
BASE COUNT         1253 a          757 c          875 g         1242 t
ORIGIN      
        1 tgagtgaaga gtagaggtaa aatagtaagc ctttttaacc agtttattta ttgtacctat
       61 tttagaaaaa agaaaagtag aaaagagata ttaggtaaac tcatagtgca aaagaatata
      121 gaaaaaactg cttgtgtaga aatggcgctt agttcagtcc tcagctaaaa ttttagaaaa
      181 aaagcataga gattttttac ctctatgctt tttattgtat tgactatatt taacgccaag
      241 ccttgaattg gttaattaaa ccatttgtgg agctgtcgtg gctgttgatt ttttcatcgg
      301 tttcgagttc gggtaaaatg cggtttgcaa gctgtttgcc taactccacg ccccattggt
      361 cgaaactgta aatgttgaac agcacgcctt gcacgaagat tttgtgttca tacattgcaa
      421 ttaatgcccc taagctgtac ggggtgattt tttgcaccaa gatagagttg gtcggtttgt
      481 ttccgctgaa cactttaaac ggcacgattt cagctacttc ttccaacgtt ttacctgcat
      541 ctaaaaactc tttttcaact gtttcttttg atttaccgaa agctagtgct tcagtttgag
      601 caaagaagtt agaaagcagt ttgttgtgat gatcgcttaa cggattgtga gtttgtgccg
      661 gtgcgataaa atcacaagga attaattttg tgccttgatg aatgagttga tagaatgcgt
      721 gctgaccgtt agttcccggt tcgccccaaa taatcggacc tgtttggtga gtaaccggtt
      781 tgccgtcacg ccccacaaat ttaccgtttg attccatatt gccttgttgg aaataagccg
      841 caaagcggtg catatattgg tcgtaaggta aaatcgcttc tgattcagca cctaagaaat
      901 tgttattcca aatgccgact aaagctaacg tagttggaat gtttttctca atcggcgtga
      961 ttaagaaatg cttatccatt gcgtgagcac cagcaagtag ctgctcgaag ttctcaaaac
     1021 ctaatgaaag ggcaatcgaa agcccgatgg cagaccataa tgagtaacga ccgccaaccc
     1081 aatcccagaa ttcaaacata ttagcggtat caataccgaa tttttccact tctttggcat
     1141 tggttgaaag tgccacgaaa tgttttgcta ccgcagattc atctttggca gaatcaagta
     1201 gccatttgcg agctgaaagg gcattggtca tcgtttcttg agtggtaaag gtttttgaag
     1261 ccactaacac taacgtggtt tcaggattaa ctttacgcaa cacttcagca atatgcgtgc
     1321 cgtccacgtt agacacaaag tgcatattaa ggtgattttt ataagggcgt aatgcctctg
     1381 ttaccatata aggacctaga tccgagccac caataccgat attgatcaca tcagtaatcg
     1441 ttttgccggt atagcctttc cattcgccgg aaataacacg ctcgcagaaa tctttcattt
     1501 tcgctaacac ggcattcact tccggcatta catctttgcc atcgactgcg attggtgtat
     1561 tggcacggtt acgcagtgca acgtgcaata cggcacggtt ttcagtgcgg ttgatttttt
     1621 tgccggagaa catcgcattt tttgctgatt ccaaaccaca ttcatttgcc agttggcgaa
     1681 gtaaggttaa ggttttttcg ttgatcgcat tttttgaaaa atcgactaat aattgatctt
     1741 caaaacggag ggaatatttg tcgaaacggt ttggatcttc ggcaaaaagt tgaggaatag
     1801 aaaggttgtc tgctttatgt tgctctaagg cattccaagc aaaagtttgc acagggttaa
     1861 ttttttgcat ctgagtttcc ttatactaaa ttaaaaaatc gattattcat ctgttctttg
     1921 agtcagttca tcaagacgtt tttctaattc ggttaatttt tcacgagtgc ggagtaacac
     1981 ttgagattga acatcaaatt cttcacgagt gacaacatca agacgggcta attgggcttg
     2041 aaggatttgc ttaaattttt catctagatc attaccgaca ttttttaagc tttgcggtaa
     2101 ggcgttatgg agttgttgag caatcgcttc taagttcttc ggcgtgagca tatttaaatt
     2161 ccttactata aatgagtatc ccaattttat tgaattttgg gtttaagaga aagcaaattc
     2221 tttgtaaaat atcacctttc gcaaaataca agcaaaaaag accgcttgta ttttttattt
     2281 gtggttcgta aacctcccac acaaaaaaac taaggacaca aaatgactca tcaaaaacca
     2341 aaagccgttg tgattttttc cggcggtcaa gactctacca cttgtttatt ccaagctatt
     2401 gctgaatttg gcaaagaaaa tgtggaagtc gttacctttc aatatgggca acgccattcg
     2461 attgaacttg aaaaagcacg ctggatttct aacgatttag gcgtcaaaca aacgctgatt
     2521 gatacttcgg tgattaaagc gattactacc aatgcgttaa tggataataa tgctgaaatt
     2581 caacaacaag gcagcacacc caataccttt gtggatgggc gtaatgcctt atttctgctt
     2641 tataccgcca tttatgccaa agggcagggc attcaaacta tttttaccgg cgtgtgtgag
     2701 accgatttta gtggttaccc tgattgccga gatgtatttg taaaatcaat gaatgtaacg
     2761 ctaaatttag cgatggacta taatttcaac attcgcacgc cattgatgta tttaactaaa
     2821 aaagaaactt gggcattagc agataagctg ggtgcttttg attatattcg agaccatacc
     2881 cacacctgtt atttaggcgt tgaaggtggt tgccacgact gcccgagttg cgtattgcga
     2941 gaaaaaggct tgaatgaata tttagcagaa agggaggtaa gcaatgttta aaattgctaa
     3001 agaatttagt tttgatatgg ctcatatgct agatggacac gatggcaaat gccaaaactt
     3061 acacggacac acctacaaat tgcaagttga ggtggcaggt gagctatttc aagagggagc
     3121 taaaagagga atggtaatgg actattcgga tctaaaagca gtggtaaaac aacatatttt
     3181 agagccgatg gatcacgctt ttatttacga cttacagagt gagcgtgaaa gccaagtagc
     3241 acaattatta attgatttaa actccaaggt ttatggtatc ccaactcgta ccacagccga
     3301 agaaatggcg aaatatatgt ttgaaaaatt agagaaagtg ggcttaccgg ttagcctaat
     3361 tcgcttgtgg gaaacgccta cttcttattg tgagtacagc aaataatggc ggagttaatt
     3421 tcaaaccctc gttttccgat tgttgagatc tttgaaagct tacaagggga aggctttaat
     3481 accggaatgc cggctatttt tgtacgtttt ggcaaatgca acctcacttg cccgtggtgc
     3541 gataccaatt acaatcaatt tgagcaatgg acgttaagcg atattcttgc caaagtaaga
     3601 agctattctg cgaaaaatgt gattattacc ggaggcgagc caacgattca gcctaattta
     3661 tcgttattat tagaacaatt taaaaaagag ggatattttt tagcgatcga aaccaacggc
     3721 ttaaaagagg ttccggcaca aattgattat attgcgacca gcccaaagcg aatgtaccaa
     3781 gaaaagtatc aacgccgttg cattgaattt gcgaatgaag tccgtatcgt cgttgatgga
     3841 gaagtacagg gtttctgtga gcaaatagaa agccaaatta aagctgagca ttactatctt
     3901 tcaccttgtg aggtagaggg aaaaatgaac ttgctggaaa ccatcaccca gattgggtta
     3961 ttaaatcagc gtccaaataa gcctaaatgg cagctaagta tccaaacgca taaaattgtg
     4021 gggattgaat aagtagaagt tagaagatga tttgtaaaag atcagacttg atctgacaat
     4081 tcactctaaa aagtgagagt ttcccgttta gaatatgagt gtccaaa
//
LOCUS       DANMCL010000135         4067 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.138, whole genome shotgun sequence.
ACCESSION   DANMCL010000135 DANMCL010000000
VERSION     DANMCL010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4067
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.138"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(451..1545)
                     /locus_tag="PXF40_002569"
     CDS             complement(451..1545)
                     /locus_tag="PXF40_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011848300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5803843.1"
                     /translation="MKKTTLAILASALIANSALAITIYDHKETGTQIEFIGSARIKWE
                     STSDKTSPVNGKATRNHVNHAVDNNGSRFGFRLTQQVGHGFYALGRVEWRMRGDSSSQ
                     HNFDHIYDHQLYAGIGHKQYGELTYGNMTNIADEVKQTDLPNTLSLSDGLLTGSSRRT
                     LQYVYKGIEGLKLGAFYGGNSQRGNNGLDLVNKRKDIWGAAAIYNYKIDDNQSLKLAT
                     GATRERSEQSIGNYERIALAFGTAYTYGKTTLGLDLERRETEDQNAIGHKRIEKEVRT
                     VLLHRLTDQWNAYTMYAYKENKLNAVGLANDSKVKRNQFMLGTEYYIVPKHLKGFVEW
                     QATRAKHYTNDVKTAKSRNYTTVVGLRAYW"
     gene            1679..2857
                     /gene="lpxB"
                     /locus_tag="PXF40_002570"
     CDS             1679..2857
                     /gene="lpxB"
                     /locus_tag="PXF40_002570"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HDL5803844.1"
                     /translation="MKQQFPVIGLVAGEVSGDILGAGLIKALKVHYPNARFIGVAGSR
                     MIEAGCQSLFDMEELSVMGLAEVVKHLPRLLKRRKQVIDEMLKLKPDVFIGIDAPDFN
                     LTVEEKLKASGIKTIHYVSPSVWAWRQKRVFKIARAANLVLAFLPFEKAFYDKFNVPC
                     RFIGHTMADAIPLEPNRTEACLALNIDESKRYMAILVGSRGSEIQFLAEPFLKAAQLL
                     KARFPDLQFLVPMVSQKRMEQFNAIKQQVAPELELNIIQGKARQAMIASECTLLASGT
                     AALEAMLCKSPMVVGYRMKPLTYWLAKKLVKTDYISLPNLLAQAPLVPELIQEACNPE
                     NLAQELSLFLADDEKNQQHKALLKQQFMQLHQSIQCNADEQAAQAVIDLLNGSTSGQI
                     "
     gene            2884..3936
                     /gene="sohB"
                     /locus_tag="PXF40_002571"
     CDS             2884..3936
                     /gene="sohB"
                     /locus_tag="PXF40_002571"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005595593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HDL5803845.1"
                     /translation="MWKEVLLNYGIFLLELLTVFGIIAVVVMLILESKKQNENGSISI
                     TNLSEKYKEQQKSLSGFFLSEEELKHQEKQEKKVAKEKAKAEKKRLKAGEECVESPSR
                     LFVLNFNGDMMAHEVNSLRREIDAVISLANPEKDEVLLKLESPGGVVHGYGLAASQLQ
                     RLRDRNIYLTAAVDKVAASGGYMMACVANKIVSAPFAVIGSVGVVAQVPNIHRLLKKH
                     DIDVDVMTAGEYKRTVTLVGENTEKGKQKFQQELEETHSLFKQFVARHRPQLDIEQVA
                     TGEHWFGQQAIELNLVDEIATSDDLLLNAIKEKEVIELKYKEKKKLAQKLGSQFEQSA
                     ENLLAKILHKSRSTLM"
BASE COUNT         1216 a          698 c          887 g         1266 t
ORIGIN      
        1 aggaaaaatg tgctgtggca gaacaccgat ggcaacctta cttgatggaa aacggatttg
       61 ggtggaaaag aatttaagct caaattaatc tgacagacac ggtaatttaa aacgggggac
      121 tgtcagatta ggtttgatct tctacatata ataacccctc atcacttttt gcagtttaac
      181 ctcttttgca acagataatt taaatttagg cgttttggct gctcagttat tgccattatg
      241 attatattag ttcacactaa aattttagtg ttgtttctta aagctgaaga tgctaatagg
      301 tgagtaagcg gtttttacca ctttgaagat aaatgcaata gcttcttgtt tgaaggatta
      361 gttgtattta atcataaaaa atctgcacct taatcagttg gttagcccaa cttttaggtg
      421 cagatcattc tagtacgctt ttcagtttta ttaccaatat gctcgtaagc ctacaacagt
      481 cgtataattg cgagattttg cggtttttac atcattagta tagtgtttag cacgagttgc
      541 ttgccattca acaaagcctt ttaagtgttt tggaacaatg taatattccg ttcccaacat
      601 aaattggttt cttttaactt tgctatcatt tgccaagcct acagcattaa gtttgttttc
      661 tttataagca tacattgtgt aagcattcca ttgatcggtt aaacgatgga gtaacacagt
      721 gcgaacttct ttttcgatac gtttgtgacc gatagcattt tgatcttccg tttcacggcg
      781 ttctaaatct aagccaaggg tagtttttcc gtaggtataa gctgtaccga aggcaagagc
      841 aatgcgttca taattgccga tagattgctc agaacgctca cgggttgcac ctgttgctaa
      901 ttttaagctt tggttatcat caattttata gttataaatt gctgctgcac cccaaatatc
      961 tttacgttta ttgactaaat ctaagccatt gtttccacgt tggctatttc cgccatagaa
     1021 tgctccgagt tttaatcctt cgatgccttt gtaaacatat tgaagcgtac gtcgtgatga
     1081 accggtaagt aagccatcac ttaagctgag tgtatttggt aagtcagttt gttttacttc
     1141 atcggcaata ttagtcatat tgccgtatgt taattcaccg tattgtttat gcccgattcc
     1201 tgcatagagt tgatgatcat aaatatgatc gaagttatgt tgtgagcttg aatcgccacg
     1261 catacgccat tccacacgac ctaaagcata gaatccgtga cccacttgct gggttaaacg
     1321 gaaaccaaaa cgagagccgt tgttatccac tgcgtgatta acgtggttgc gggtagcttt
     1381 accatttacc ggtgaggttt tatctgaggt gctttcccac ttaatacgag cagaaccaat
     1441 aaattcaatt tgtgtaccgg tttctttatg atcgtaaatc gtaatagcta gagctgagtt
     1501 tgcgattaag gctgatgcta aaatcgctaa tgttgttttt ttcataaaaa tcactccata
     1561 tgaatagata aagggaggta gtgtatgtga atattcattg ctagacaata atgttttgtt
     1621 agtttatatg atgattggtt ataatagagt cacttacaga tcttcaataa tatttaatat
     1681 gaaacaacaa ttccccgtta ttggcttagt tgctggtgag gtctctggcg atattcttgg
     1741 tgccgggtta attaaggcgt taaaagtaca ttacccgaat gctcgattta tcggtgttgc
     1801 aggctctcga atgattgagg ctggctgcca gtctttgttt gatatggaag agctttctgt
     1861 aatggggcta gcagaggtgg ttaaacattt acctcgttta cttaagcgtc gtaaacaggt
     1921 tattgatgag atgcttaaat tgaaaccaga tgtatttatc ggtattgatg caccggattt
     1981 taatttaacc gttgaagaaa aactcaaagc gagtgggatt aaaacaatcc attatgttag
     2041 cccttcggtg tgggcttggc gacaaaagcg ggtgtttaaa attgccagag cagctaattt
     2101 agtgttggca tttctgccat ttgagaaagc gttctatgat aaattcaatg tgccttgtcg
     2161 ttttatcggg catacgatgg cagatgcgat cccactcgaa ccaaatcgta cagaggcatg
     2221 tttagcgtta aatattgatg aatccaagcg atatatggca attttggtgg gaagccgtgg
     2281 cagtgaaatt cagtttttgg ctgagccttt tttgaaggct gctcagttgt taaaagcccg
     2341 ttttccggat ttacagtttt tagtgccaat ggtcagccaa aagcgaatgg agcaatttaa
     2401 tgcaattaaa cagcaagtag ctcccgagtt ggaactgaat attattcaag gcaaggctcg
     2461 tcaggctatg attgcgtcag aatgtactct tttggcatcg ggaacagcag cactagaggc
     2521 aatgttgtgc aaatctccga tggtagttgg ttatagaatg aaaccgctga cttattggtt
     2581 agcaaaaaaa ttagtgaaaa ccgattatat ctccttaccg aatttattgg ctcaagcccc
     2641 attggtacca gaattgatcc aagaagcatg caacccggaa aatttagctc aagagttatc
     2701 tctattttta gctgatgatg agaaaaacca acaacataaa gcattgctaa aacagcagtt
     2761 tatgcagcta catcaatcaa ttcaatgtaa tgctgatgag caagctgccc aagcggttat
     2821 cgatctccta aacggctcga caagcggtca aatttagtta gttttttgta aaaaggaaaa
     2881 tttatgtgga aagaagtatt acttaattat ggtatttttt tattagagtt attaactgta
     2941 tttggcatta ttgcagtggt ggtgatgctg attttggaat cgaaaaagca gaatgaaaac
     3001 ggctcaattt caattaccaa tttatctgag aaatataaag agcagcaaaa atctctttcc
     3061 ggcttttttc taagtgagga agaattaaaa catcaggaaa agcaggagaa aaaagtagca
     3121 aaagagaaag ctaaagcaga aaaaaaacgc ttaaaagcag gcgaagaatg tgtagaaagc
     3181 ccttcccgtt tatttgtatt gaattttaat ggcgatatga tggctcacga agtaaattcc
     3241 ctacgccgtg aaattgatgc ggtaattagc ctcgcgaatc cggaaaaaga tgaagtttta
     3301 cttaaacttg aaagtccggg cggagtggtg cacggttatg gattggctgc ttcgcagtta
     3361 caacgtttgc gtgatcgcaa tatttattta accgcagcgg tagataaagt agctgccagc
     3421 ggtggttata tgatggcgtg tgtggcgaat aaaattgtct ctgccccatt tgcggtgatt
     3481 ggctcagtgg gggtggtggc tcaggtgccg aatatccacc gcttactgaa aaaacacgat
     3541 attgatgtgg atgtgatgac tgcaggtgaa tataaacgca cggtgacgct ggtgggagaa
     3601 aataccgaaa aagggaaaca gaaattccag caagaactgg aagaaacgca ctctctgttt
     3661 aagcaatttg tggctcgaca ccgcccacaa ctggatattg agcaggttgc aacaggcgag
     3721 cattggtttg gtcagcaagc gattgagcta aatttggttg atgagattgc aaccagtgat
     3781 gatctgctcc tcaatgcaat taaggaaaaa gaagtgatcg agctaaaata taaagagaag
     3841 aaaaaacttg ctcagaaatt gggttctcaa ttcgagcaat cagcagagaa cctgctcgct
     3901 aagattttac ataaaagtcg ttcaacgctg atgtagcgta tatattatta aagggctatc
     3961 gtttatatag ccccttattt tatcagttag taatagaatg aagtatttgt tcactattta
     4021 aatgacctgg aatacttttc tttaaattga gtgaagaatc taacaat
//
LOCUS       DANMCL010000136         4054 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.139, whole genome shotgun sequence.
ACCESSION   DANMCL010000136 DANMCL010000000
VERSION     DANMCL010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 4054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4054
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.139"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..876
                     /gene="ttcA"
                     /locus_tag="PXF40_002572"
     CDS             <1..876
                     /gene="ttcA"
                     /locus_tag="PXF40_002572"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005634611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HDL5803846.1"
                     /translation="RLRRNVGNAIADFGMIEEGDRVMVCLSGGKDSYTLLDILLNLQQ
                     SAPVNFSVVAVNLDQKQPGFPEEVLPRYLESIGVEYKIVEENTYGIVKEKIPEGKTTC
                     SLCSRLRRGILYRTATELGATKIALGHHRDDMLATLFLNMFYGGKMKSMPPKLISDDG
                     KQIVIRPLAYCKEKDIIKYAEAKQFPIIPCNLCGSQPNLQRQVVKEMLNTWDRQYPGR
                     LETMFSALQDIVPSHLCDPKLFDFKGIKHGQTIEGIEGDTAFDDVKIEAKTFLYEDDD
                     NNFAEAGMIQFKEVN"
     gene            complement(860..1507)
                     /locus_tag="PXF40_002573"
     CDS             complement(860..1507)
                     /locus_tag="PXF40_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HDL5803847.1"
                     /translation="MIIHILDDEESILDAMSFLLAPLGVEIQTWQSSLDFLAQADLHR
                     QGVLLLDIRMPLPDGQQVHQQLREAQSTLAVVIMTAHGDVPMAVAELKKGAVDFLQKP
                     ASFEQLKQAIAQAEKVSEKAVKIREISQNYAKLTEKERNLVPLIMQGFTNKQIADKLA
                     ISVRTVEVHRANVMEKMQAESLAGLVQMIGELQYKGSGNCSATFSFDFCRINLLL"
     gene            complement(1593..3251)
                     /locus_tag="PXF40_002574"
     CDS             complement(1593..3251)
                     /locus_tag="PXF40_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhnD/SsuA/transferrin family substrate-binding
                     protein"
                     /protein_id="HDL5803848.1"
                     /translation="MKRFLTLFLLLFSSFSLAETHQIGILAQRGEAYTRTHWQPWVDW
                     LNSQFPNERFELVPLGINEASRRAELDFLLTNQAQFFYLSNQNVRWLATLNSPFSANG
                     EQGAVGSSIWVRADSHYQQLSDLKNQTISAVDNDAFGGFLLGLYQFHQAGMRQNRDFS
                     VQFSGFPVENALALLAEKQVEAAIVPVCLLEELEKEGKFKRSDFRLILQNPQAQGCLA
                     STPLLPNWSLAAMENVPNELAVQLATRLLNSHNPDLPRWTLPFSSAQADHILRELYRH
                     PQQKSLWATVLDWVRLNKFGLLAVVLFILLNLVALRYQVYRKSKALQQAHCKMQQYQQ
                     ELTRADRLALLGEMTTGFAHELKQPLSAVRMYAEGLKSQNSDPYQQRILDKLIAQVDR
                     AVKTMQSIRDWAQNRPSGEPQAVILNQLITNVIEFVAVENRQNAQISLIADRTFRLNL
                     HATVLEQVLTNCLLNALQAGASEISVRLQAVENGLEIAIEDNGGGFSPAQLEFPFVPF
                     RTDKPHGLGLGLVLCQRLMQSLNGRIVLANGENGAKVVLLLPQI"
     gene            complement(3251..3667)
                     /locus_tag="PXF40_002575"
     CDS             complement(3251..3667)
                     /locus_tag="PXF40_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative toxin-antitoxin system toxin component,
                     PIN family"
                     /protein_id="HDL5803849.1"
                     /translation="MHSDYLVIDTNILISGLLFPKSNPNLAVKKALLGYTICVSQATF
                     DEFLEVSARPKFAKYFSIQEREEFIANLLDAVKFVEIKETITDCQDPKDNKFLEVAIS
                     AKAKYLVTGDKKDLLSMNPYRNVEIISVSEFLAETR"
     gene            complement(3657..3953)
                     /locus_tag="PXF40_002576"
     CDS             complement(3657..3953)
                     /locus_tag="PXF40_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HDL5803850.1"
                     /translation="MTAITIPQFEEVTSKQFQSEFGRIVDIVKGKTPVAITQYGRPTM
                     VLFPYDQAVEARRLLAKQRLLEMLAERDKNPPAALAEITLEELDKMIDEERNAL"
BASE COUNT         1069 a         1001 c          890 g         1094 t
ORIGIN      
        1 cgtttacgcc gtaatgtcgg taatgccatt gccgattttg gtatgattga agagggcgac
       61 cgtgtaatgg tctgcctttc cggcggtaaa gacagctata cgctgttaga tattttgctc
      121 aatttacagc aaagtgcacc ggtgaatttt agtgtggtag cggtcaattt agaccaaaag
      181 caaccgggat ttccggaaga ggtattgcct cgctatttag aaagcattgg cgtggaatac
      241 aaaattgtgg aagaaaacac ctacggcatc gtaaaagaga aaattccgga gggcaaaacc
      301 acctgttcac tttgctcacg acttcgccgt gggattttat accgcaccgc caccgaattg
      361 ggtgcaacca aaattgcatt agggcatcac cgtgacgata tgctggcgac tttattctta
      421 aatatgttct acggcggcaa aatgaaaagt atgccaccta aactgatctc tgatgacggc
      481 aagcaaattg tgatccgccc actcgcctat tgtaaagaaa aagacattat caaatatgcc
      541 gaagccaagc agttcccgat tattccgtgt aatctgtgtg gttctcagcc taatttacaa
      601 cgccaagtgg tgaaagaaat gctgaatact tgggatcgcc aatacccggg gcgtttagaa
      661 acaatgttca gtgctttgca agatatcgtg ccatcccact tatgcgatcc gaaattgttt
      721 gattttaaag ggattaaaca cggtcaaacc attgaaggca tagaaggcga caccgctttt
      781 gatgatgtca aaattgaagc caaaaccttc ttatacgaag atgacgataa caattttgcc
      841 gaagcgggaa tgattcagtt taaagaagta aattaatacg gcaaaagtcg aaactaaagg
      901 tagcagagca atttccgcta cctttatatt gtaactcccc gatcatctgc accagccccg
      961 ccaaactctc cgcctgcatt ttttccatca cattggctcg atgtacttcc accgtacgca
     1021 ctgaaatcgc taatttatct gcgatctgtt tattggtgaa accttgcata atcagtggca
     1081 caaggttacg ctctttttcc gtcaatttgg cgtaattttg cgaaatttca cgaattttca
     1141 ccgctttttc acttactttt tccgcctgtg caatcgcctg ttttagctgt tcaaaacttg
     1201 ccggcttttg cagaaaatcc actgcgcctt ttttcaattc agcgactgcc atcggcacat
     1261 caccgtgggc ggtcataatc accaccgcca gggtcgattg tgcctctcgc agttgttgat
     1321 gaacctgttg cccgtctggc agcggcattc gaatatctag taacagcacg ccttgccggt
     1381 gtaaatccgc ctgtgccaaa aaatctaggc tggattgcca cgtttggatt tccaccccaa
     1441 gcggggcaag caggaacgac atagcgtcta aaatgctttc ttcgtcatca agaatgtgaa
     1501 taatcatttt ttcttttttc cgtaggggcg ggtcctgtgc ccgccctgaa tttgatagga
     1561 tttacgggca ggcacaggac ctgcccctac atttatattt gagggagtaa aagcactacc
     1621 ttcgccccgt tctccccgtt cgccaataca atccgtccgt tgagcgattg catcagccgt
     1681 tggcatagca ccaagcctag ccctaagccg tgtggtttgt cggtgcgaaa tggcacaaac
     1741 ggaaattcaa gctgggcagg ggaaaaaccg ccgccgttgt cttcgattgc aatttccagc
     1801 ccgttttcga ccgcttgtaa ccgcaccgat atctcgcttg caccggcttg cagggcgttg
     1861 agcaggcagt tcgtcagtac ttgttccagt accgtggcgt gtaaattaag ccgaaaagtg
     1921 cggtcggcaa tcagcgagat ttgtgcattc tggcgatttt ccaccgccac aaactcgatc
     1981 acattagtaa tcaattggtt caaaatgacc gcttgcggtt caccactcgg gcggttttgc
     2041 gcccagtccc gaatgctctg catcgttttc actgcccgat ctacctgcgc aatcagctta
     2101 tccaaaatcc gctgttgata aggatcgctg ttttggcttt tcagcccctc ggcgtacatt
     2161 cgcaccgccg acaacggctg tttcagttcg tgagcaaaac cggttgtcat ctcgcccaac
     2221 aaagcaaggc ggtcggctcg ggtcagttcc tgctgatact gctgcatttt gcagtgtgcc
     2281 tgctgtaacg ccttgctttt gcgatagacc tgataacgca gggcgacaag gttgagcaaa
     2341 atgaacaaca ccaccgccaa caagccgaat ttattgagac gaacccaatc cagcaccgtt
     2401 gcccacaggc ttttttgttg cgggtggcga tacagttcac gcagaatgtg atcggcttgg
     2461 gcggaagaaa acggcaacgt ccagcggggt aggtcgggat tgtggctgtt tagcaagcgt
     2521 gtggcaagct gtaccgccag ctcgtttggc acattttcca ttgccgccag cgaccagttc
     2581 ggcaacaacg gcgtgctggc aaggcaaccc tgcgcctgtg ggttttgcaa aattaagcga
     2641 aaatccgacc gcttgaactt gccctctttc tccaactctt ccagcaaaca gaccggtaca
     2701 atcgccgctt ccacctgttt ttccgccagc aaagccaacg cattttccac cggaaaaccg
     2761 ctaaactgca ccgaaaaatc ccgattttgc cgcattcctg cttgatgaaa ctgatacaac
     2821 ccaagcaaaa aaccgccgaa agcatcgtta tccaccgcac tgatagtctg atttttcaga
     2881 tcgcttaact gctgataatg gctgtcggca cgcacccaaa tgctactgcc caccgcccct
     2941 tgctcaccat ttgccgaaaa cggactgttg agcgtggcaa gccatcgcac attttggtta
     3001 ctcaaataga aaaactgagc ttgattggtc agcagaaaat ccaactccgc ccggcggctc
     3061 gcctcgttaa tccccaatgg aaccagctca aaccgctcgt tgggaaactg cgaatttaac
     3121 caatccaccc aaggctgcca atgggtgcgg gtgtaggctt ccccacgctg agcgagaatg
     3181 ccgatttggt gggtttcggc taatgaaaaa gatgaaaaaa ggagaagaaa aagagtgaga
     3241 aaccgtttca ttagcgagtt tccgctaaaa attcgctgac ggaaataatt tcaacattcc
     3301 gataagggtt catactgagg agatcttttt tatcgcccgt cactaaatac ttcgcttttg
     3361 cactgatcgc cacttctaaa aatttattat ctttgggatc ttggcaatct gtaatcgttt
     3421 ctttaatttc cacaaacttt actgcatcca acaaattggc aataaattct tccctttcct
     3481 gaatactgaa atatttagca aatttcggtc tagcggagac ttctaaaaat tcgtcaaaag
     3541 tcgcttgcga gacacaaatg gtatagccta ataaggcttt tttcactgct aaattgggat
     3601 ttgattttgg gaacaataaa ccactaatca aaatattcgt atcaatcact aaataatcag
     3661 agtgcattac gttcctcatc aatcatttta tccaactctt caagcgtgat ttctgcaaga
     3721 gctgccggcg gattcttatc tcgctctgca agcatttcaa gcaaacgctg ttttgctaat
     3781 aatcgccgag cttcaaccgc ttgatcgtaa ggaaaaagca ccattgtcgg tctgccatat
     3841 tgggtaatcg ccacaggggt tttgcctttt acgatatcaa caattctgcc gaactcagat
     3901 tgaaattgct tagaagtcac ctcttcaaat tgagggatag taatcgctgt catttttaag
     3961 ctcctaatgt gagtgatttt ggatatgtta gctatgtttt gtgtaaaaat caatcgagcc
     4021 aattaagata aatttttgta gttattgtaa attc
//
LOCUS       DANMCL010000137         3993 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.140, whole genome shotgun sequence.
ACCESSION   DANMCL010000137 DANMCL010000000
VERSION     DANMCL010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3993
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.140"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            32..2482
                     /locus_tag="PXF40_002577"
     CDS             32..2482
                     /locus_tag="PXF40_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014390755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail length tape measure family protein"
                     /protein_id="HDL5803851.1"
                     /translation="MTVEVGGVVITADLEFENLLRDTQKVDKAMDDIGKSTLKAEKGL
                     KGLETQATKTAIAVNQATNKMKNIRGVAGQLGYQIQDISIMLQMGSNASTVIAQQGSQ
                     ILSIFGPMGAVAGAILAISGAIGGALLPSLFDSTDATELLAAAQKNLSEVVTQTESGV
                     SALSAKIIKLAKVSEDAAKAKIAVAMSDAKIAIKAAGDSSQKAFEQFDGFFGSFTNSS
                     QSIRNAIDELKRYESKGKDVGAVIKELGGTYGGAIAEVNALDSVTSEMSKTLGITQSE
                     ALGLIKLLAQLEQDKSPDNIKLLAIALSDLSDKNGWANEELNKLTRTINDNSVSALDA
                     ETSVRLLESAIKDLQNAIQNSQGALDGNVAKMNQLADAAERKAATIGKTERETAKYAA
                     TLLATTDEAKKNLDSTLSRIDASYDQIEAYQAEQKALQDKKTADAKAAREAEAAAKKS
                     AQAKKQVVEQLRQMATQYEIAVLRQKGMHLEAVKLEAGMRLGAAATKEQREEAEKLAQ
                     SIYGATAASQNFNAIQAQASPVTALDQRHQQQLAQIEEYKILYPQKIMEAEAARAAIE
                     EQYRQQRMEAQWEEWKQASDGARMFGDAVDAVGSSATSTITGLLNGTMSVRDAFASIA
                     NTILNSVVQSLVEMGMAQVKQMIMGQTAAKASMAAQMVQAKALAASFAPAASMVSLAT
                     QGANAIPAQAAITSTMSMAQVAAVTGRKLGGPVSARQMYRVGENNQPEIFKASNGMQY
                     MIPGQSGRVFSNKQSQGQGGGESKTVAVIVNQTNHFSSDEASANQAAVAKALSNQIKA
                     SVRLELQSQMRAGGVLAR"
     gene            2486..2815
                     /locus_tag="PXF40_002578"
     CDS             2486..2815
                     /locus_tag="PXF40_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803852.1"
                     /translation="MQTFNFKVEQDYTVQNEPSVVILKFADGYEQTAPKGLNHNLKKY
                     QGITVKANKAEAVKIQQFLNAHGGYKKFNWRDRTSDETVTVRCRSWSSTKLGAVIEFT
                     LNFDEVI"
     gene            2815..3285
                     /locus_tag="PXF40_002579"
     CDS             2815..3285
                     /locus_tag="PXF40_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5803853.1"
                     /translation="MPKAPPKKMASELIKLEQDALIELWEIDLTHIYSSSNPNQRGEI
                     FRFHNGVSQTQQNIWWQGNEYQAYPIAADGFEISGQGPSNRPTLTVSNLYGVVTVLVE
                     DFGQPVEAKVSSEETVDGNIQMTVELLKKMDQIADQRYRRNQLNDLRTGGTLSK"
     gene            3293..>3993
                     /locus_tag="PXF40_002580"
     CDS             3293..>3993
                     /locus_tag="PXF40_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HDL5803854.1"
                     /translation="MPISISNQMKLDLAKLEQNAMLDLYEVDLRKLQDKNGNAGSVYR
                     FYSGLNELKTSIVWQGRTYDPYPIEATGFERNSSGPSNRPTLTLSNLFGLVTGIANQF
                     DECIGAIVRRHQVYAQYLDAVNFAGGNAKADPNQEIISHFVIEQLSSLTRETATFTLA
                     LPIETDNAKIPSRIIMADTCTWIYRSAECGYTGKQYFDEKDKATSDPKADKCSHCLNG
                     CELRGNQRNFGGFVSV"
BASE COUNT         1319 a          805 c          935 g          934 t
ORIGIN      
        1 tttttattta aataatttta aggaattgtt tatgacggtc gaagttggcg gagttgtaat
       61 taccgcagat ctagaatttg aaaatctgct aagagatact caaaaagttg ataaagcgat
      121 ggatgacatc ggaaaatcaa cattaaaagc agaaaaaggg ctgaaagggc tagaaacgca
      181 ggcaaccaaa acggcgatag cagtaaatca agccacaaac aaaatgaaaa atatccgtgg
      241 agtagcaggt caacttggtt atcaaattca agacatctca ataatgcttc aaatgggttc
      301 taacgcttca accgttattg ctcagcaagg gtcgcaaatc ttaagtattt tcggtccaat
      361 gggagctgtt gcaggggcga tcttagctat tagtggtgct attggtgggg cgttactccc
      421 tagtttgttt gattcaactg atgcaactga gcttttggca gcagctcaaa aaaatctcag
      481 cgaagtagtt actcaaacgg aaagtggtgt ttccgccctt tctgcgaaaa tcattaaatt
      541 agcaaaagta agcgaagatg cagcaaaagc aaaaattgca gtagctatga gtgatgcaaa
      601 aatagctatt aaggcagcag gggattcatc acaaaaggca tttgagcaat ttgacggctt
      661 ttttggatcg tttacaaatt caagtcaaag tattcggaac gcaattgacg aattaaaacg
      721 ctatgaatca aaaggtaaag atgttggtgc cgtaataaaa gaacttggag gcacatatgg
      781 tggtgcaatt gccgaagtta atgcgctgga ttctgtgaca agcgaaatgt ctaaaacgct
      841 tggtattact caatctgagg ctcttggttt gataaaactg ttggctcaat tagagcaaga
      901 caaaagccct gataatatta aattactcgc gatagcttta tctgacttaa gcgataaaaa
      961 tgggtgggcg aacgaagagc taaataagct aaccagaacg ataaacgata attcagtatc
     1021 tgctttagat gccgaaacat cagtaagact cttagagtct gctataaaag acttgcaaaa
     1081 tgcaatccaa aactcccaag gtgcattgga tggcaatgta gcaaaaatga atcaacttgc
     1141 agatgcggca gaaagaaaag ctgcaacgat aggcaagact gagcgtgaaa ctgctaaata
     1201 tgcagctacg ctattagcta caaccgatga agctaaaaaa aatcttgatt ccacattaag
     1261 taggattgac gcatcatacg atcaaatcga agcctatcaa gccgaacaaa aagccttaca
     1321 agataaaaag accgcagatg caaaagctgc cagagaagct gaagcggctg caaaaaaatc
     1381 cgctcaagcc aagaagcaag ttgtcgaaca gttgcgacaa atggctacac agtacgagat
     1441 tgctgttttg aggcaaaagg gaatgcatct cgaagccgta aaattagaag ctggtatgcg
     1501 tttaggagct gcggcaacaa aagagcaacg agaagaagct gaaaaactag cacaaagtat
     1561 ttatggagca accgcagcaa gtcagaactt taacgctata caagcccaag catctcctgt
     1621 tactgcatta gaccaacgac atcaacaaca gctagctcag atcgaagaat ataaaatctt
     1681 gtatccacaa aaaataatgg aagcagaagc tgcgagagct gcaatcgaag aacaataccg
     1741 ccagcaacga atggaagctc aatgggagga gtggaagcaa gcgagcgacg gggcgagaat
     1801 gtttggtgat gcggttgatg ctgttggttc aagtgcaaca agcacaatta cggggctact
     1861 aaatggcaca atgtccgtgc gtgatgcttt cgcatcaatt gcaaatacga tcttaaatag
     1921 tgtagtacaa agccttgtcg aaatgggtat ggctcaagtt aagcaaatga ttatggggca
     1981 aactgctgcc aaggcttcta tggcggcgca aatggtgcaa gctaaagcgt tagctgcttc
     2041 atttgcaccc gcggcctcta tggtttctct tgccacacag ggggcgaatg ctattcccgc
     2101 tcaagctgcg atcacgtcaa ctatgagtat ggctcaagtc gccgcggtga caggtcgtaa
     2161 acttggcggc cctgtatcag ctagacagat gtatcgtgtc ggcgagaaca atcagcccga
     2221 aatcttcaaa gcgagcaatg ggatgcaata tatgatcccc ggtcaaagcg gtcgtgtatt
     2281 cagcaacaag cagtcgcaag gtcaaggtgg aggcgaaagc aaaacagtag ctgtcatcgt
     2341 aaatcaaacc aatcacttta gcagcgatga agccagtgca aatcaagcgg ctgttgcaaa
     2401 agcattgagc aatcaaatca aggcttccgt gagattggaa ttgcagtcac aaatgcgagc
     2461 tggtggagtt ctagcgaggt aatcaatgca aacatttaat ttcaaggttg agcaagacta
     2521 cactgttcaa aatgagccca gtgtcgtcat actaaaattt gccgatggtt acgagcaaac
     2581 cgctcccaaa gggttaaacc acaatctgaa aaaataccaa ggcattaccg taaaagcgaa
     2641 caaagcagaa gcggtgaaga ttcagcaatt tctcaatgct cacggtgggt ataagaaatt
     2701 caactggcgc gatagaacaa gcgatgagac ggtaacggtt cgttgcagaa gctggagctc
     2761 cactaaatta ggtgcagtca ttgagtttac acttaatttc gatgaggtga tttaatgcca
     2821 aaagcccccc ccaaaaaaat ggcatcagag ttgataaaac tcgaacaaga tgccctgatt
     2881 gagctgtggg agatagatct cactcacatc tactctagct caaacccaaa tcagcgcgga
     2941 gagatattcc gctttcacaa tggcgtgagc caaacacaac agaacatctg gtggcaaggc
     3001 aatgaatacc aagcataccc gattgccgcc gatggttttg agatttcggg tcaaggaccg
     3061 tcaaatcgtc caacactcac tgtctctaac ctgtacggtg ttgtcacggt attagtagaa
     3121 gatttcgggc aacccgtaga ggcgaaagtc agcagtgaag agactgtaga tggcaatatc
     3181 caaatgacgg tggaactgct gaaaaaaatg gatcaaatcg ccgatcaacg ctaccgtaga
     3241 aatcagttaa atgatttaag aacaggtgga acattatcta aataggtgaa gtatgccaat
     3301 tagtatttct aaccaaatga aactagatct tgccaaactt gagcaaaatg caatgctgga
     3361 cttgtacgag gttgatttgc gtaaattgca agacaaaaac ggcaatgctg gttcagttta
     3421 ccgcttttat tctgggctaa atgaactcaa aacaagtatt gtctggcaag gtcgaactta
     3481 cgacccttac cccatcgagg caacaggatt tgagcgtaac agcagcggcc caagcaatcg
     3541 ccctactctt acgctatcaa atctgtttgg cttagttacg ggtattgcta atcagtttga
     3601 cgaatgtatc ggtgcgattg ttcgccgtca tcaggtttac gcccaatatt tagatgcagt
     3661 aaactttgct ggaggtaatg ccaaagccga tcctaatcag gaaatcatca gccattttgt
     3721 gattgagcaa ctttcaagcc tcacacgaga gactgctact tttacgcttg cgttgccgat
     3781 tgaaaccgat aatgccaaaa tccccagcag aattattatg gcggacacct gcacttggat
     3841 ttaccgctcg gcggaatgtg gctacaccgg caagcagtat tttgatgaaa aagacaaggc
     3901 aacatcagac ccaaaagccg ataaatgcag ccattgcctg aacggttgtg aattgcgagg
     3961 caatcagcgt aattttggtg gatttgtatc ggt
//
LOCUS       DANMCL010000138         3866 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.142, whole genome shotgun sequence.
ACCESSION   DANMCL010000138 DANMCL010000000
VERSION     DANMCL010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3866
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.142"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>3866
                     /locus_tag="PXF40_002581"
     CDS             <1..>3866
                     /locus_tag="PXF40_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015587035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HDL5803855.1"
                     /translation="WEIYDLAPILSKMLGVEISFDKWALYDVARYCDQLVPDGMGGME
                     PRFTCNVWLTEVKTAYDLLNDFCSVFRAIPIWTGTEVSVIIDRPRDPVWTYTNANVVG
                     GFERSYSARKSRHNAVQVTYSDKTNGYESAIEYVSDDEEIKKHGLNLSQITAFGCTSR
                     GQAHRTGKWILETEKREKETITFTVGREGLMHLPGDIIRVADSHYAGTEIGGRVLAIN
                     GRKVTLDREISIDNASYFTYINGEATHSSKIQSVNGKEITLDSTPTGLETYGVWSLST
                     KQISSGLYRSISIVENADGTNTITALQHEPQKEAIVDNSAHFVETARTLYKAPQINAV
                     EVSTGYDGKLYITGDISSGDGKLTYDIKITKDGNLYQYKKGLSDPNIELSDLPNGDYT
                     VIIYGKNAKGQIVTEKTQTFTIDRPPAPTGVVVTGGLGQITLEWDWVNEVTQTEIFAA
                     ETDNFALAKKIAKVTARTYAHTLKGNKVVRYYWLRHTRGINVGPFYQQQGVRGQTAVD
                     LDARLTELNTQLSRNIVNEVFDVAAPARGLELVKTVANLTDKGTKLASSQVYNQADGK
                     LYTWNGTAYSATVAAEDVTGKLSKSKIDTSLISQLTGADNTANLARRLAETAQSNINQ
                     EITNRQDAVTAEANNRTKAIQAESANLTKKIQAEATARGAAVTQLQNVDAQQAQLISA
                     VTAKADNALSGLEEEKTARANADKAESQAREALTARMGAAESNIVTIQRTVANNAQSI
                     SEVSQNLNAKIDNINIGGRNLLRDSEFNAYNKWGSPQIEFAENANRRTIKVTSTGTNG
                     PVGIVSSNRHSTSYFQQGETYTLSLFARGSKALDYLYLMRQDGNNVRLPVINVASETE
                     FNHYKLTFKAPFTTQQGYVLIGFRQTSTEQFVEFHSVKLEKGNVATDWTPAPEDVESA
                     VSAVSADLTSYKQTQAATDSAQAQQLNQLSVNLTKAETNFNAKITEEKKARVDADKVN
                     ADKLTDITSRVANAESTITNFQSTKANKSEVASIAQQNLQSIWRTDAQSAVDALKIGG
                     ANLLVDSEYLTTARWGGSSRVASSQYGDRRLTQVFVTQAGTGHFGVTQGTQKATTRIR
                     QGETYTLSLNAQGTAGFTRTGLNYVYLIREDGGNFRLPTLPLTASLSQRPKVTFTAPW
                     TSNQVRLLIGANGIFEATDWFAFHSVKLEMGNVATGWTPTAKDIDDKVSAVQSNLTAY
                     QAAQAKADQAKATQISGLTTRMGAAESNLTRTERAVTELNQTTVTTLRDLTARTKTTE
                     GSLSRLETAKANKTEVASIAQSSLQS"
BASE COUNT         1219 a          836 c          887 g          924 t
ORIGIN      
        1 cttgggaaat ttacgattta gctccgattt taagcaaaat gcttggggtt gaaatcagtt
       61 ttgacaaatg ggcgttgtat gatgttgctc gctattgcga tcaacttgtg ccggacggta
      121 tgggtggaat ggagcctcgt ttcacctgta acgtatggct cacggaagtt aaaactgcct
      181 atgacttgtt gaatgatttc tgctcggtat tccgtgcgat tccgatttgg accggaacag
      241 aagtatcggt cattatcgac cgtccgcgtg atccggtttg gacttacaca aatgctaatg
      301 tagttggtgg atttgaacga tcctactctg ctcgcaaatc acgccataat gcagtgcaag
      361 ttacttattc ggataaaaca aatggctatg aaagtgcgat tgaatatgtc tctgatgacg
      421 aggaaatcaa aaagcacggc ttaaatttaa gtcaaattac tgctttcggt tgtacctctc
      481 gggggcaagc acaccgtacc ggaaaatgga ttttggaaac cgaaaaacgg gaaaaggaaa
      541 ccattacttt taccgtggga cgtgagggct taatgcactt gccgggcgat attattcgtg
      601 tggcagacag ccattatgcc ggtacggaaa ttggcggacg tgtactggcg attaatgggc
      661 gaaaagtcac gttagatcgt gaaattagca ttgataacgc cagttatttt acctatatca
      721 acggtgaggc aacgcactct agcaaaatcc aatcggtaaa cggcaaagaa attacgctgg
      781 atagtacacc aaccggctta gaaacctacg gtgtttggtc gttatcgact aaacaaatca
      841 gctctggatt atatcgctca atctcgattg tcgaaaatgc ggacggcaca aacactatca
      901 cagcgttaca acacgaaccg cagaaagagg caattgttga taactccgct cactttgtgg
      961 aaacggctag aacactctac aaagctccac aaattaacgc agtggaagtc tcgaccggtt
     1021 atgacggtaa gctctacatt accggtgata ttagctccgg tgatggcaag ctaacctatg
     1081 atattaaaat taccaaagat ggcaatttat atcaatacaa aaaaggctta agcgatccga
     1141 acattgaact aagtgattta cctaacggcg attataccgt cattatttac ggcaaaaacg
     1201 ccaaagggca aatcgtcacc gaaaaaacac aaacctttac tattgatcga cctccagctc
     1261 cgaccggtgt agtagtaaca ggtggattag ggcaaattac cctcgaatgg gattgggtaa
     1321 atgaggttac gcaaaccgag attttcgcgg ccgaaaccga taatttcgcc cttgcaaaaa
     1381 aaatcgcaaa agtgaccgct agaacctacg ctcacacact aaaaggtaac aaggttgtac
     1441 gctattattg gctacgtcat accagaggca ttaatgtcgg accgttttat caacaacagg
     1501 gggtaagagg acaaacagcg gttgatttgg atgctcgatt aaccgaatta aacactcagt
     1561 tatcacgcaa tattgttaat gaggtttttg atgttgctgc accggcaaga ggtttagaat
     1621 tagtgaaaac agtcgctaat ttgaccgaca aaggtactaa actggcgtca tctcaagttt
     1681 acaatcaggc tgacggcaag ctctatactt ggaacggtac agcatactca gctacagtgg
     1741 ctgcggaaga tgttaccggc aaattatcaa aatctaaaat tgatacgtcc cttatttcgc
     1801 aattaacagg tgcagataac accgcaaatt tggcaagaag attagcggaa acagctcaaa
     1861 gcaacattaa ccaagagatt actaaccgac aagatgccgt tactgccgaa gcaaataacc
     1921 gtactaaagc cattcaagcc gaaagtgcga atttaacgaa aaaaattcaa gctgaagcaa
     1981 ccgctcgtgg ggctgctgtt acacagttac aaaatgttga tgctcaacaa gcacagttga
     2041 tttctgctgt cacagcaaaa gctgataatg ctctttcagg cttggaagaa gaaaaaacag
     2101 cacgagcaaa cgccgataaa gcggagtctc aagcacgtga agcattaaca gcaagaatgg
     2161 gagcagctga aagcaatatc gtaactattc aacgtacggt agcaaataat gcccaaagca
     2221 ttagtgaagt cagtcagaat ttaaatgcta agattgataa tattaatatc ggcggtcgga
     2281 atttattaag agacagcgag ttcaatgcgt acaataaatg gggtagccca caaattgaat
     2341 ttgctgaaaa tgcaaatcgc cgaactatca aagtaacctc aacaggtact aacggtcctg
     2401 ttggtattgt ttcatctaat cgccattcca catcttattt ccaacaagga gaaacttata
     2461 cactctcatt atttgctcga ggaagtaagg cactagacta tctctatcta atgcgtcaag
     2521 atgggaataa cgttagatta ccagtgatta acgttgcctc tgaaactgag tttaatcatt
     2581 acaaactcac gttcaaggct ccttttacca cgcaacaagg ttatgtctta atcggttttc
     2641 ggcaaaccag cacagagcag tttgttgagt ttcacagcgt caaacttgaa aaaggcaacg
     2701 tagccacaga ctggacacca gcaccggagg atgtggagag tgcggttagt gctgtttcgg
     2761 ctgatttaac gagttataaa caaactcaag cggctaccga ttcagcacaa gcacagcaac
     2821 ttaatcagtt atctgtgaac ttgaccaaag cagagactaa tttcaacgcc aaaatcacgg
     2881 aagaaaaaaa agctcgtgtt gatgcagata aagtgaatgc agataaactc acagacataa
     2941 caagccgtgt tgcaaatgcg gaatcaacta ttaccaattt ccaatcaacc aaagcgaata
     3001 aaagtgaggt ggcaagtatt gcccagcaga acttacagag catttggcgc accgatgcgc
     3061 aaagtgcggt ggatgccttg aaaatcggtg gtgcaaatct actggttgat agtgagtatt
     3121 tgacgacagc ccgttggggc ggtagctcac gagtggcaag ctcgcaatat ggtgatcgtc
     3181 gcttgactca agtgtttgtg acccaagcag gcacagggca ttttggtgtg actcaaggca
     3241 cacaaaaagc cactacgcgt attcgtcagg gtgaaaccta taccttgtca ctaaatgcgc
     3301 aggggacggc aggttttacc cgcacagggt taaactatgt gtaccttatc cgcgaagatg
     3361 gtggcaattt tagattgcca actttgccgc ttactgcatc attgtcccaa cgccctaaag
     3421 tgacatttac tgcgccgtgg acgagcaatc aagttcggtt actgattggc gcaaatggca
     3481 tatttgaggc gacagactgg ttcgcatttc acagcgttaa gctcgaaatg ggtaatgttg
     3541 ccacaggctg gacaccaacc gccaaggata ttgacgacaa agtatcagcg gttcagtcca
     3601 acctcaccgc ttatcaggcg gcacaagcta aagcagatca agccaaagct acgcagattt
     3661 cggggctcac aacccgaatg ggggcagcgg aaagtaacct cactcgcacc gaacgggcag
     3721 tgacggaact taatcagaca acggtgacga cactgcgtga tctaaccgcg cgcaccaaaa
     3781 caacggaagg ttcgctctct cgtttggaaa ccgccaaagc aaataaaact gaggtggcaa
     3841 gtattgctca aagctcctta cagtca
//
LOCUS       DANMCL010000139         3666 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.143, whole genome shotgun sequence.
ACCESSION   DANMCL010000139 DANMCL010000000
VERSION     DANMCL010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3666
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.143"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            210..2012
                     /gene="frdA"
                     /locus_tag="PXF40_002582"
     CDS             210..2012
                     /gene="frdA"
                     /locus_tag="PXF40_002582"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010944100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HDL5803856.1"
                     /translation="MQSVNFDVAIIGAGGGGLRAAIAAAEANPNLKIALISKVYPMRS
                     HTVAAEGGSAAVIKDTDSFDNHFNDTVGGGDWLCEQDIVEYFVEHSPIEMTQLERWGC
                     PWSRREDGEVNVRRFGGMKIERTWFAADKTGFHILHTLFQTSIKYPNIVRFDEHFVLD
                     ILTDNGEARGCVAMNMMEGTLVQINANAVVIATGGGCRTYRFNTNGGIVTGDGLSMAY
                     RHGVALRDMEFVQYHPTGLPNTGILMTEGCRGEGGILVNKDGYRYLQDYGLGPETPIG
                     KPENKYMELGPRDKVSQAFWQEWRKGNTLKTAKGVDVVHLDLRHLGEKYLLERLPFIC
                     ELAKAYEGVDPAKAPIPVRPVVHYTMGGIEVDMNAETSIKGLFAVGECASSGLHGANR
                     LGSNSLAELVVFGKVAGENAARRALEVTARNQPQIDAQAKDVVARLHALANQEGNESW
                     SDIRNQMGDAMEEGCGIYRTQESMEATVNKIQELKERYKNISVKDKSSVFNTDLLYKI
                     ELGFILDVAQSIACSAVERKESRGAHQRLDYVERDDVNYLKHTQAYYNAEGTPTIKYS
                     DVKITKSQPAKRVYGAEAEAQEKVKKAAEAQAQQ"
     gene            2028..2759
                     /locus_tag="PXF40_002583"
     CDS             2028..2759
                     /locus_tag="PXF40_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005639269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HDL5803857.1"
                     /translation="MANLDKMTIEVLRYNPESDSEPHLDRYEVPYDSQTSLLDALGFI
                     KDELEPELSYRWSCRMAICGSCGMMVNGKPKLACKTFLRDYSGFMRIEPLANFPIERD
                     LVVDLSHFIDSIEAIKPYIIDNKAPEGQRTKQTPAQLEKYRQFSMCINCGLCYAACPQ
                     FGLNPEFIGPAAITLAHRYNLDNRDNGREERMKLLSSKNGVWSCTFVGYCSEVCPKHV
                     GPASAVNQGKLESAKDYVISMIKPR"
     gene            2769..3161
                     /gene="frdC"
                     /locus_tag="PXF40_002584"
     CDS             2769..3161
                     /gene="frdC"
                     /locus_tag="PXF40_002584"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HDL5803858.1"
                     /translation="MSATKRRPYVRGMKASWWKKLDFYKMYMVREATCLPTVWFCIVL
                     FYGAVALSKGTFTTDFVDFLQNPLVVILNIISLAAMLYHAATLFVMTPAVMSVMVKGK
                     HLPVSVGRNILWAATGVISVIALILVYI"
     gene            3175..3522
                     /gene="frdD"
                     /locus_tag="PXF40_002585"
     CDS             3175..3522
                     /gene="frdD"
                     /locus_tag="PXF40_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HDL5803859.1"
                     /translation="MSLDQNPKRSNEPPVWLLFSAGGMVSALFFPVVIFIIGLLLPFG
                     LVSPDNIISFAHTWIGKLAIMVLAIFPMWAGMHRIHHGLHDLKVHTPAGNVIFYGLSI
                     LYTILVIIAVVQI"
BASE COUNT         1082 a          666 c          856 g         1062 t
ORIGIN      
        1 ttaaacatta gaaattttct ttctatcact gtccaattaa gagccattct caataccttt
       61 atgaagcttt attacctttt ttgaggtaga tcacaaaatt acatttttta tgttacaaat
      121 ttgtaaaaat aggttatctc attgctcaaa tagtggcaca atatgattac tttttaatga
      181 attaagttat ttaactttcg gagtgcatta tgcaaagtgt taattttgat gtcgcgatta
      241 taggtgccgg tggtggtggc ttgcgtgctg ctattgcggc ggctgaagca aatccaaatc
      301 taaaaattgc tttaatttca aaagtttacc caatgcgtag ccatacggtt gcagcagaag
      361 gtggttcagc ggcggtaatt aaagataccg actctttcga caatcacttt aatgataccg
      421 tcggtggtgg tgactggtta tgtgagcaag atattgtgga gtattttgta gagcattcgc
      481 cgattgaaat gacacaatta gaacgctggg gttgcccttg gagtcgtcgt gaagacggtg
      541 aagtgaatgt tcgccgtttt ggaggaatga aaattgagcg tacttggttt gcggcggata
      601 aaaccggttt ccacattttg catactttgt tccaaacttc gattaaatat ccgaatattg
      661 tgcgttttga tgagcatttt gtgctggata ttctcaccga caacggcgaa gctcgtggtt
      721 gtgtggcaat gaatatgatg gaaggcacac ttgttcaaat caatgcaaat gcagttgtga
      781 ttgcaaccgg tggcggctgc cgtacttatc gctttaacac taacggcggt attgtaaccg
      841 gcgacggttt atcaatggcg tatcgtcacg gtgtggcttt gcgtgatatg gagttcgtac
      901 aatatcaccc aacaggtttg ccaaataccg gtattttgat gacagaaggt tgtcgtggtg
      961 aaggtggtat tttagttaat aaagatggct accgttacct gcaagattat ggtttaggac
     1021 cggaaacacc tatcggcaaa ccggaaaaca aatatatgga attaggccct cgtgataagg
     1081 tttcacaagc attctggcaa gaatggcgta aagggaacac cttaaaaacc gcaaaaggcg
     1141 tggacgtagt tcacttagat ttacgccatt taggtgaaaa atatttactt gagcgtttac
     1201 cgtttatttg tgaattagcg aaagcctatg aaggggtcga tccggctaaa gcgccgattc
     1261 ctgttcgccc ggtggttcac tacacgatgg gtggtattga agtggatatg aatgcggaaa
     1321 cctcaattaa aggcttattc gcagtaggtg aatgtgcttc atcaggcttg cacggtgcga
     1381 accgtttggg ttctaactca ttagcagagc ttgtggtgtt cggcaaagtt gccggtgaaa
     1441 atgcggctcg ccgtgcgtta gaagtgactg ctcgcaacca gccacaaatt gatgcacaag
     1501 caaaagatgt ggtggctcgc ttgcacgcat tagcgaacca agagggtaat gaatcttggt
     1561 cggatatccg taaccaaatg ggtgatgcga tggaagaagg ttgtggtatt taccgtaccc
     1621 aagaaagtat ggaagcgact gtaaacaaaa tccaagagct aaaagagcgt tataaaaaca
     1681 tcagcgtaaa agataaatca agtgtgttta acactgattt actctacaaa attgaattag
     1741 gcttcatttt agatgtggct caatccattg cttgctctgc ggtagagcgt aaagaatctc
     1801 gtggggctca ccaacgttta gactatgttg agcgtgatga tgtgaactac ttaaaacaca
     1861 cacaagcgta ctacaatgca gagggtacac cgacgattaa atacagcgat gtgaaaatca
     1921 ctaaatcaca accggctaaa cgtgtgtatg gtgcagaggc tgaagcccaa gaaaaagtca
     1981 aaaaagcagc agaagctcaa gcacaacaat agagaaggag tagtaaaatg gcaaatttag
     2041 ataaaatgac catcgaagtg ctacgctaca accctgaatc agatagcgag ccacatttag
     2101 acagatatga agtgccgtat gacagccaaa cttcactttt agatgcattg ggcttcatta
     2161 aagacgaatt agaaccggaa ctttcttatc gctggtcttg ccgtatggcg atttgtggtt
     2221 cttgcggaat gatggtaaac ggtaagccga agttagcttg taaaacattc ctgcgtgatt
     2281 acagcggttt tatgcgaatt gagccgctgg cgaacttccc gattgagcgt gacttagtag
     2341 tggatttaag ccactttatt gatagcatcg aggcaattaa accttatatt attgataata
     2401 aagcaccgga aggacagcgt actaaacaaa cgccggcaca attagagaaa tatcgtcaat
     2461 tctcaatgtg tatcaactgc ggtttatgtt atgcggcttg cccacaattt ggtttgaacc
     2521 ctgaatttat cggacctgct gcgattacat tggctcaccg ctataacttg gataaccgtg
     2581 ataatggtcg tgaagagcgt atgaagctac tcagcagcaa aaacggtgtt tggagctgta
     2641 ctttcgtggg ttactgctcg gaagtctgtc cgaaacacgt cggccctgct tcggctgtaa
     2701 accaaggtaa acttgaaagt gcgaaagatt atgttatctc aatgatcaaa ccgagatagg
     2761 aggaagaaat gtcagcaaca aaacgtagac cttatgtaag gggaatgaaa gccagctggt
     2821 ggaaaaaact cgacttctat aaaatgtata tggtgcgtga agctacctgt cttccaactg
     2881 tttggttctg cattgtatta ttttatggag cagttgcgtt aagtaaagga acatttacta
     2941 ccgattttgt ggatttctta caaaatccgt tagttgttat cctaaacata atttcattgg
     3001 cagcaatgtt atatcatgcg gcaacacttt ttgtgatgac acctgccgtc atgtccgtga
     3061 tggttaaagg taaacactta ccagtctcgg ttggaagaaa tattctttgg gcagcaacag
     3121 gcgtaattag cgtaattgca ttaatcttgg tttatattta agaaggggaa gaaaatgagt
     3181 cttgatcaaa acccaaaacg ttcaaatgaa ccgccggtat ggttgctttt tagtgctggg
     3241 ggaatggtaa gtgcattatt tttccctgtg gtaatcttta ttatcggttt attactgcca
     3301 ttcgggttag tatcaccaga taatatcatt tcctttgccc atacttggat cggcaagctc
     3361 gctattatgg tattagcgat tttccctatg tgggcaggaa tgcaccgtat ccatcatgga
     3421 ttacacgacc tgaaagttca cacgccagca ggtaatgtga ttttctacgg attgtctatc
     3481 ttatacacaa ttctagtaat catcgcagtc gtgcagattt aaatgagaaa gaccatcttg
     3541 tataaagcag atggtctttt catttttaat atgctaacaa gcggtcgaat ttataagaaa
     3601 atttgcaaat attagaaatt ttgccgataa aacgatcgtt ttgtattaaa tatctgcaaa
     3661 aaagat
//
LOCUS       DANMCL010000140         3652 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.144, whole genome shotgun sequence.
ACCESSION   DANMCL010000140 DANMCL010000000
VERSION     DANMCL010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3652
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.144"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            6..1190
                     /locus_tag="PXF40_002586"
     CDS             6..1190
                     /locus_tag="PXF40_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005602767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HDL5803860.1"
                     /translation="MSRPLNFVMISPHFPTNFETFAIRLREAGFNTLGIADAPYESLS
                     ENLRHSLTEYYRVDNMEDYEQVYRAVAYFAHKYGRIDRIESHNEYWLELDAKLRTDFN
                     VFGYKSDDMLSIKTKAQMKEVFRKTGLKVAQGRVFKDDEDARKLAKQLKFPVIIKPNS
                     GVGASDTYKIKTAEELEAFFGYKTPTVEYIMEEFIDGDIITFDGLTDKEGNIVFYSSL
                     EYSEAVLDTVSKDGDMFYYVPCEISPKLVEMGKQCVKAFNVKERFFHFEFFRVKGSKK
                     EELLPLEINCRPPGGLTIDMWNYANDFDVFREFANIVKENKFYADIQHPWNVVYISRK
                     ANQNYVNSIEAVCEKFAGNIISVQSVPGVFAKVMGEQGILARTETMEQMREIAQFAQA
                     KQ"
     gene            1201..1953
                     /locus_tag="PXF40_002587"
     CDS             1201..1953
                     /locus_tag="PXF40_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018650716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HDL5803861.1"
                     /translation="MHFEKRSHWSGELGREMSFNVYGHAGKPVIVFPSSGGNENEYGN
                     FGMIEACRSFIERGLIKFYTPDSYDAESWLSKHKSGHDMALAHNAYDRYIIHELVPLI
                     RHESHWNGTMIATGCSMGAFHTVNFALRHPDLFDIAIALSGVYDARFFSGEFYGDKAV
                     YFNSPIDYVWGQNDDWFLDRYRQNHYVIAVGQGAWEEQHIEDTRRLQEAFNAKGIDAW
                     FDYWGFDIDHDWPTWRKQMPYFLGKLEEQGII"
     gene            1974..2426
                     /locus_tag="PXF40_002588"
     CDS             1974..2426
                     /locus_tag="PXF40_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HDL5803862.1"
                     /translation="MNLKAVAVSALAMSSVAMADIADVKPVVFESKFDFQTTVTTLTN
                     TLKEKGMTIFAEIDHQAAAKQAGLEMQPATVLVYGTPKAGTPLMVKDPMLALQLPLKV
                     LITEPNKGKVEVMLNRADQVVAHANTDYADVENNLAKAEKLIKATVAK"
     gene            2530..3624
                     /locus_tag="PXF40_002589"
     CDS             2530..3624
                     /locus_tag="PXF40_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HDL5803863.1"
                     /translation="MKLNQAIADRIVKRTMQIIPNSVNVMDSEGVIIASGDVGRIGQR
                     HTGAVIALRNDQAVEIDENLAKQWCDEVKAGINLPLHYLGSTIGVVGISGQPQQVRQY
                     AQLVKMAAELIMQQAFELEQERWQRRYREEFVRALLKGSLSTAEIQQQAVFFGQDFAK
                     PLSVMVIKIHGSTAEKLQRLIDFFEHYFPSLLTAVIGLDKIALLNHLSNEKSLIRNAL
                     NKLNDPDISFKTVVGLAVENLSQTHISYQTACHTLNYAEQIQSRKQIIHFEDFKLPAL
                     LHSFSHSWEAKTLLSPFQALLVSDKKQVLLKSLRYYFFANCDLDHAAKKLFIHPNTLR
                     YRLEKIEQITGLSFNNIEQKFVLYLGAVLS"
BASE COUNT         1094 a          725 c          843 g          990 t
ORIGIN      
        1 gaactatgtc tagaccactt aattttgtga tgatttcccc gcacttccca acgaactttg
       61 aaacctttgc cattcgtttg cgtgaagccg gttttaatac attgggaatt gcagatgccc
      121 cttatgaatc attgagcgaa aatctgcgtc attccctgac tgaatattat cgtgtagata
      181 atatggaaga ttacgaacaa gtttatcgtg cggtcgcgta ctttgcccat aaatacgggc
      241 gaattgaccg cattgaatcg cacaatgaat attggctgga gttagatgcg aaattgcgta
      301 ccgatttcaa tgtgtttggt tataagagcg atgatatgct ctcaattaaa accaaagccc
      361 aaatgaaaga ggtattccgc aaaaccggct tgaaagtggc acaagggcga gtatttaaag
      421 atgatgaaga tgcccgcaaa ttagcaaaac agcttaaatt cccggtgatt atcaagccaa
      481 attcaggggt tggggcaagc gatacttaca aaatcaaaac tgcggaagag ttagaagctt
      541 tcttcggtta taaaacgcca acggttgaat atattatgga agagtttatt gacggcgata
      601 ttattacctt tgacggttta accgataaag agggcaatat cgttttctac tccagccttg
      661 aatattcaga agcggtatta gataccgttt caaaagatgg cgatatgttc tactatgtcc
      721 catgtgaaat ttcgccaaaa ttagtggaaa tgggcaaaca atgtgtgaaa gcctttaacg
      781 taaaagagcg ttttttccat tttgagttct tccgtgttaa agggagcaaa aaagaagagt
      841 tgttaccact cgaaatcaac tgccgtccgc cgggtggctt aactattgat atgtggaact
      901 acgccaacga tttcgatgtg ttccgtgaat ttgccaatat tgtgaaagaa aacaaattct
      961 atgccgatat tcagcaccct tggaacgtgg tttatatttc ccgcaaggca aaccaaaatt
     1021 atgtgaattc gattgaagct gtttgtgaga aatttgccgg caatattatc agcgtgcaaa
     1081 gcgtaccggg cgtatttgcc aaagtgatgg gcgaacaagg cattttagcc cgtaccgaaa
     1141 caatggagca aatgcgtgaa attgcacaat ttgcacaagc taaacagtaa gaggtgaagt
     1201 atgcattttg aaaaaagaag ccactggagt ggagaattag gtcgtgaaat gtcgttcaac
     1261 gtttacggac acgcaggtaa accggttatt gttttccctt cctccggcgg caatgaaaac
     1321 gagtatggta attttggaat gattgaggct tgccgttcct ttattgaacg tggcttaatc
     1381 aaattttaca cgcctgattc ttacgatgcg gaatcttggt tatctaaaca taaatccgga
     1441 cacgatatgg cattagctca taatgcttac gaccgttata ttattcacga gctagtgccg
     1501 ttaatccgcc atgaatcgca ctggaacggc acgatgattg ccaccggttg tagtatgggg
     1561 gctttccata cggtaaactt tgccttacgt catccggatc tgtttgatat tgccatcgcc
     1621 ttaagcggtg tttatgacgc tcgctttttc agtggtgagt tttatggcga taaagcggtt
     1681 tattttaact cgccgattga ttatgtatgg ggtcaaaatg acgattggtt cttagaccgc
     1741 taccgccaaa atcactatgt gattgcagtc ggacaaggtg cgtgggaaga acagcatatt
     1801 gaagacaccc gccgattaca agaggctttt aacgcaaaag ggatcgatgc ttggtttgac
     1861 tactggggct ttgatattga ccatgactgg ccgacttggc gtaaacagat gccttatttc
     1921 ttaggcaagt tggaagaaca agggattatt taatctattt gaggagaaaa gaaatgaact
     1981 taaaagcagt cgcagtttct gcattagcaa tgagcagcgt ggcaatggca gatattgccg
     2041 atgtcaaacc ggtggtattt gaaagtaaat ttgatttcca aactacagtc acaactttaa
     2101 ccaacacctt aaaagaaaaa ggaatgacga tttttgccga aatcgatcac caagcggcgg
     2161 caaaacaagc cggcttagaa atgcaaccgg caaccgtatt ggtttacggc acaccgaaag
     2221 ccggtacgcc attaatggtg aaagatccga tgttagcgtt gcaattaccg ttaaaagtgt
     2281 taattaccga accgaacaag ggcaaggtcg aagtaatgtt aaatcgtgcc gatcaagtgg
     2341 tggctcacgc taataccgat tatgctgatg tagaaaacaa ccttgccaaa gcggaaaaat
     2401 taattaaagc gactgtggca aaataacttc acgctatgat ctattctcag gaagtggaag
     2461 cgtagataat ttgcaaatcc ctcgaaagag ggatttttca tagtattggg aatgagtagg
     2521 aatcatataa tgaaactcaa ccaagcgatt gccgaccgca tcgtcaagcg cacgatgcag
     2581 attattccca actccgtcaa tgtgatggat agtgaagggg tgattattgc ttccggcgat
     2641 gtcggtcgta tcgggcaacg acacacagga gcggtgattg cgttacgcaa cgatcaagcg
     2701 gtcgaaattg atgaaaatct tgcaaaacag tggtgcgatg aagtgaaagc gggcattaac
     2761 ttaccgcttc actatttagg ctcaaccatt ggtgtagtgg ggatttcagg gcagccacaa
     2821 caagttcggc aatatgctca attggtgaaa atggcggcgg agctgattat gcagcaagcg
     2881 tttgagttgg aacaggaacg ttggcaacgc cgctatcggg aagagtttgt gcgggccttg
     2941 ctcaaaggta gcctaagcac agcagaaatc cagcaacaag cggtcttttt cgggcaagat
     3001 tttgcaaaac cgctgtcggt gatggtgatt aaaattcacg gctctactgc ggaaaaactc
     3061 caacgcctga ttgatttttt cgaacattat ttcccgagcc tactcaccgc cgtgattggg
     3121 ttagataaaa ttgccttgct gaatcattta tccaacgaaa aatcgttaat ccgcaatgca
     3181 ctaaacaaac ttaacgatcc ggatatttcc ttcaaaacgg tggttgggct ggcggtcgaa
     3241 aatttatcgc aaacccatat ttcctaccaa accgcctgcc ataccctcaa ttatgccgag
     3301 cagatccaaa gccgtaagca gattattcat tttgaagatt ttaaactgcc ggccctcttg
     3361 cacagtttca gccactcttg ggaagcgaaa accttgctct cgccgttcca agctttactg
     3421 gtttccgata aaaaacaggt gttactgaaa agtctgcgtt actatttttt cgcaaattgt
     3481 gatctggatc acgctgccaa aaaattgttt attcacccaa atacgctacg ttaccgttta
     3541 gagaagattg agcagataac tggtttatct ttcaataaca tagagcaaaa atttgtgctg
     3601 tatcttggag cggttctgtc gtaaaaattg taaaaatata caaacaagcg gt
//
LOCUS       DANMCL010000141         3544 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.145, whole genome shotgun sequence.
ACCESSION   DANMCL010000141 DANMCL010000000
VERSION     DANMCL010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3544)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3544)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3544
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.145"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            11..1987
                     /gene="cpdB"
                     /locus_tag="PXF40_002590"
     CDS             11..1987
                     /gene="cpdB"
                     /locus_tag="PXF40_002590"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HDL5803864.1"
                     /translation="MLNRRKFIQLGATAMLVLGTQPSAFAQTAKNKAGLRVIATTDIH
                     GFLTDFDYYKDAPTEKFGFTRTASLIKQARAEVKNSVLVDNGDLIQGNPISDYQSTKG
                     AKEGKPEPSIMALNAMQYEVGTLGNHEFNYGLSYLDNAIKQAKFPIVNANIVKPGTDE
                     PFFTPYVIQQKEIVDEKGNKHTIKIGYIGFVPPQVMIWDKANLEGKVEARDIVKTAQK
                     YVPIVKKEGADIVVALAHTGPSDEPYKEGAENCAFYLADVKGIDAVIFGHSHRLFPNK
                     EFANSPNADIAKGTMKGVPESMAGYWGNNISVIDLSLAENDGKWGVVDGRAELRPIYN
                     TEEKKATVENHPEIVALLKETHEATRQFVSQPIGKATDNMYSYLALVQDDPTIQIVNQ
                     AQKAYVENVVKGLPELAGLPILSAGAPFKAGGRKNDPTGYTEVDKGELTFRNAADLYL
                     YPNTLVVVKATGAELKEWLECSAGMFKQIDVASDKPQYLLDWTGFRTYNYDVIDGVSY
                     QFDITQPARYDGECKLINPNSHRVVNLTFDGKPVDPKQEFLIATNNYRAYGAKFPGTG
                     DKHIVFAAPDENRQVLANYITTESKAHGQVSPKADNNWRIAPISSNAKLDIRFETSPT
                     DKAKAFIKENAQYPMEYIENDETGFAVYRIDLTK"
     gene            complement(2060..3538)
                     /locus_tag="PXF40_002591"
     CDS             complement(2060..3538)
                     /locus_tag="PXF40_002591"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HDL5803865.1"
                     /translation="MDSILGKKINSTAIPSLLCDFYKTSHRIQYPEGSQFLYSTFTPR
                     SNIYAPFVTRVVSFGFQAFILKYLIHYFNDNFFSRSQHDVVSEYTQFISDTLNIEDSG
                     EHIAQLHQLGYLPIRIKAIPEGKSVAVKVPLMTIENTHSSFFWLTNYLETLINVSLWQ
                     PITSASIAFAYRKALAEFSEQTCDDNSHLPFQAHDFSMRGMSSLESAESSGAGHLTSF
                     LGTDTIPAISFVTAYYGSQHLIGTSIPASEHSVMSSHGVDELPTFRYLMAKYPNNMLS
                     IVADTTDFWHNITVNLPLLKQEILARPESAKLVIRPDSGDFFTIICGNNSSPVEHERK
                     GLIECLWDIFGGSINQKGYKVLNPHIGAIYGDGVTYDKMIRILEGLTAKGFASSNIVF
                     GVGAQTYQRNTRDTLGFAIKATSITINGVEKAIFKAPKTDNGLKKSQKGRVKVISYDH
                     YVDELTALDDFSDDLLEVVFENGKLVKSTNFDEIRQNIAQQF"
BASE COUNT         1183 a          666 c          715 g          980 t
ORIGIN      
        1 gagatatttt atgttaaata gaagaaaatt tatccagctt ggtgcaactg caatgcttgt
       61 attggggaca caaccgtctg catttgcaca aacagccaaa aataaagctg gcttgcgtgt
      121 catcgccact acggatattc acggtttctt aactgatttt gattattaca aagatgctcc
      181 aacagaaaag tttggtttta cccgtacggc aagcctaatt aaacaagcta gagcagaagt
      241 taaaaacagt gtgttagtcg ataatggtga cttaattcaa ggtaatccta tttctgacta
      301 ccagtcaacc aaaggtgcaa aagagggcaa acctgaacct tcgattatgg cattaaatgc
      361 gatgcaatat gaagtcggaa cgctgggaaa tcatgaattt aactacggtt taagctattt
      421 agataatgct attaagcaag caaaattccc tattgtcaat gcaaacattg tgaagccggg
      481 gacagatgaa ccattcttta caccttatgt tattcaacaa aaagaaattg tagatgaaaa
      541 agggaataag cataccatta agattggtta tatcggtttt gtaccaccac aagtgatgat
      601 ttgggataaa gctaatcttg aaggaaaagt tgaagctcga gatattgtga agaccgcaca
      661 aaaatatgtg cctatagtaa aaaaagaagg ggcagatatt gtcgttgcat tggcacatac
      721 cggcccttca gacgaaccct ataaagaagg cgctgagaac tgtgcgtttt atctagctga
      781 tgtaaaaggt attgatgcag ttattttcgg gcattcacat cgcctgttcc caaataaaga
      841 atttgcaaat tcaccaaatg ccgatattgc aaaaggaaca atgaaaggcg taccggaaag
      901 tatggctggc tactggggaa ataacatcag tgtgattgat ttaagcttgg ccgaaaacga
      961 tggtaaatgg ggcgttgtgg acggtagagc agagttgcgt ccaatttata atacggaaga
     1021 gaaaaaagca accgttgaga accaccctga aatcgttgca ttattaaaag aaacccatga
     1081 agcaacccgt caatttgtgt ctcaacctat cggtaaagca actgataata tgtatagtta
     1141 ccttgcgtta gttcaagatg accctaccat tcaaattgtg aaccaagctc aaaaagcgta
     1201 tgtagaaaat gtggtaaaag gcttgccgga gcttgcagga ttaccaattc taagtgccgg
     1261 agcaccgttt aaagccggtg gacgtaaaaa tgacccgaca ggctataccg aagtcgataa
     1321 aggcgaatta actttccgca atgcggcaga cttatacctt tacccaaata ccttagtggt
     1381 ggttaaagca acaggagcag aattaaaaga gtggttagag tgcagtgcag gaatgttcaa
     1441 acaaattgat gtcgcttcgg ataaaccgca atatttactg gattggacag gtttccgcac
     1501 ctataactac gatgtaattg acggtgtcag ctatcaattt gatataaccc aaccggctcg
     1561 ttatgacggc gagtgcaaat tgatcaaccc taattcgcac cgtgtggtga acttaacctt
     1621 tgacggcaaa ccggttgatc ctaaacaaga attcttaatt gccaccaaca attaccgtgc
     1681 ttatggagca aaattcccgg gaacaggcga taaacatatt gtgttcgccg caccggacga
     1741 aaaccgccaa gtgttagcga attatattac caccgaaagt aaagctcacg ggcaggtaag
     1801 tccgaaagcg gataacaact ggcgtattgc accaattagc tcaaatgcaa aattggatat
     1861 tcgttttgaa acctctccaa cagataaagc taaagctttc attaaggaaa atgcacaata
     1921 tccgatggag tatatcgaaa acgatgaaac cggcttcgca gtttaccgta ttgatttaac
     1981 caaataatca gagctaaata caagcggtct aatttgcaaa aaaattaaca aatttgaccg
     2041 cttgtttcat tccatttttc taaaattgtt gtgctatatt ttgccgaatt tcatcaaaat
     2101 tggtcgattt gaccaactta ccattttcaa aaaccacctc taaaagatca tctgaaaaat
     2161 catccagtgc ggttagctcg tcaacataat gatcataaga gattactttt actcgccctt
     2221 tttgcgattt ttttaagccg ttatcggttt taggagcttt gaaaattgcc ttttcgacac
     2281 cgttaattgt aattgaagtc gctttgattg caaaacccag cgtatcacga gtattgcgtt
     2341 gataagtttg agccccaacg ccaaacacaa tattgctgga agcaaaacct tttgccgtta
     2401 agccctctaa aatccgtatc attttatcat aagtgacgcc gtcaccataa attgccccaa
     2461 tatgcggatt aagcacttta taaccttttt ggttaatact accaccaaaa atatcccaca
     2521 aacactcaat cagacctttg cgttcgtgtt caacggggga ggaattgtta ccgcaaataa
     2581 ttgtaaaaaa atcaccgcta tcagggcgga taaccaattt tgctgattcc ggtcgagcta
     2641 aaatttcttg ttttaataat ggcaaattaa cggtgatgtt atgccagaaa tcggttgtat
     2701 ctgccacaat agatagcata ttatttggat attttgccat taaataacgg aaagtcggca
     2761 gctcatcaac accgtgtgaa ctcatcaccg aatgttctga tgccggaata gatgtaccga
     2821 ttaaatgttg agaaccataa taggctgtca cgaatgaaat tgcaggaatg gtatctgtgc
     2881 ctaaaaatga ggttagatgt ccggcaccgg agctttctgc tgattctaag gaactcattc
     2941 cacgcataga gaaatcgtgt gcctggaagg gtagatggct attatcatca caggtttgct
     3001 ctgaaaattc ggctagagcc ttacgataag caaatgcaat ggaagctgat gtaataggct
     3061 gccataatga cacattaatc agggtttcca aataattagt cagccaaaaa aagcttgagt
     3121 gagtgttttc aattgtcatt aaaggaactt tcactgcaac agattttcct tctggaatag
     3181 ctttaattct gataggtaag taaccgagct gatgcaattg tgcaatatgt tcgccagagt
     3241 cctcaatatt caatgtgtca gaaataaatt gagtatattc agaaacaacg tcatgttgtg
     3301 agcgagaaaa aaaattatcg ttaaaataat gaatcaagta ttttaaaata aatgcctgaa
     3361 agccaaatga tacaacacgt gtaacaaatg gagcataaat attactacga ggtgtgaatg
     3421 tactatataa aaactgagaa ccttcaggat attgaattcg atgtgaagtt ttataaaaat
     3481 cacataatag tgatggtatt gcagttgaat taattttttt acccaaaata ctatccattt
     3541 tctt
//
LOCUS       DANMCL010000142         3537 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.146, whole genome shotgun sequence.
ACCESSION   DANMCL010000142 DANMCL010000000
VERSION     DANMCL010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3537
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.146"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..115)
                     /locus_tag="PXF40_002592"
     CDS             complement(<1..115)
                     /locus_tag="PXF40_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entericidin A/B family lipoprotein"
                     /protein_id="HDL5803866.1"
                     /translation="MKKLVLTILAAATFLTACNTVDGVGEDVEKAGDKIQQA"
     gene            complement(195..1172)
                     /gene="rluD"
                     /locus_tag="PXF40_002593"
     CDS             complement(195..1172)
                     /gene="rluD"
                     /locus_tag="PXF40_002593"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018652666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HDL5803867.1"
                     /translation="MTQQKILTAEITADLLGARLDQALAQLFPDYSRSRIKVWIESDL
                     VKVNGNIVNKAREKVFGGETVEITAEIEEEIRFEPQDIPLNIVYEDDDIIVINKPKDL
                     VVHPGAGNPDGTVLNALLHYYPPIAEVPRAGIVHRLDKDTTGLMVVAKNIPAQTHLVT
                     ALQKRRITREYEAIASGIMTQGGKVDEPMARHPTKRTAMAVHPMGKPAVTHYRIMERF
                     RNYTRLRLRLETGRTHQIRVHMAHIAHPLLGDQLYGGRPRPPKGASDSFLSVLRGFQR
                     QALHATMLRLEHPITGEMMEWHAPLPDDFIELIQALKADYELYKDQLDY"
     gene            1313..2092
                     /locus_tag="PXF40_002594"
     CDS             1313..2092
                     /locus_tag="PXF40_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HDL5803868.1"
                     /translation="MRKFKSLATLVLAGLFVAGCSNSNKELEQSNVQDLYGKGQTYLQ
                     DGDYNSAIRYLEAVGTKGGQYSGLGEQTQLSLIYAQYKVGEYYKALDAAERFARSYPN
                     AANMDYVFYLAGLSNARLSDNFIQDFFGVNRASRAVDNVRNAYGNFQTIVQRYPQSQY
                     AQDAQNWMNYLFNRLAEHELAVVKFYDERNAYVAVVNRIEEMLRFYPNTLATKQALPY
                     LKEAYKQMNIPDAEQKTELLIQEYESKELPNPEKLKYGEQF"
     gene            2165..3196
                     /gene="tsaD"
                     /locus_tag="PXF40_002595"
     CDS             2165..3196
                     /gene="tsaD"
                     /locus_tag="PXF40_002595"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HDL5803869.1"
                     /translation="MRILGIETSCDETGVAIYDEDKGLVANQLYSQIDMHADYGGVVP
                     ELASRDHIRKTLPLIQEALKEANLQPSDIDGIAYTAGPGLVGALLVGSTIARSLAYAW
                     NVPALGVHHMEGHLLAPMLEENAPEFPFVALLISGGHTQLVKVDGVGQYELLGESIDD
                     AAGEAFDKTGKLLGLDYPAGVAMSKLAESGTPNRFKFPRPMTDRPGLDFSFSGLKTFA
                     ANTIKANLNENGELDEQTKCDIAHAFQQAVVDTILIKCKRALEQTGYKRLVMAGGVSA
                     NKQLRADLAEMMKKLKGEVFYPRPQFCTDNGAMIAYTGFLRLKNDEQTDLSISVKPRW
                     AMTELPPIN"
     gene            3278..>3537
                     /locus_tag="PXF40_002596"
     CDS             3278..>3537
                     /locus_tag="PXF40_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL5803870.1"
                     /translation="MNNYVISLTSAQERRKHIEAEFGKQNIPFQFFDAITPDLIKEKA
                     KAFNIDISNTNLTKGEIACALSHIALWHLAKQQNLDYICIFE"
BASE COUNT         1073 a          748 c          687 g         1029 t
ORIGIN      
        1 cagcctgctg aattttatcg cccgcttttt caacatcctc accaacacca tcaacggtat
       61 tacacgcagt caagaaagtt gcagctgcta aaatagttaa tactaatttt ttcatagaaa
      121 gctccttttt tgttgtttac ttatgaaaac gatttcaata tagcaacttt acattattta
      181 agcaacacct aaacttaata atctaattga tctttataaa gctcataatc cgcttttagt
      241 gcctgaatca attcaataaa atcatcaggt aacggggcgt gccactccat catttcacca
      301 gtaatcggat gctctaatct caacattgtg gcgtgtaagg cttggcgttg gaagcctcgt
      361 aacaccgata aaaacgagtc actcgcacct ttaggtgggc gaggtctacc gccatagagc
      421 tgatcaccta ataatgggtg agcaatatgc gccatatgta cccgaatttg gtgagtacgc
      481 cctgtttcta atcttaaacg taaacgtgtg taattacgaa aacgctccat aatacgataa
      541 tgcgtaaccg ccggttttcc cattgggtga acagccattg ccgtacgttt agttgggtgg
      601 cgagccattg gctcatcaac ttttccgccc tgtgtcataa tgccgctggc aatcgcttca
      661 tattcacggg taatacgacg tttttgtaat gcggttacta agtgagtctg tgccggaatg
      721 tttttagcca ctaccattaa gcctgtcgtg tctttatcca atcggtgaac aatccctgct
      781 cgaggcactt ctgcaatcgg tggataataa tgtagcaaag cattcagcac tgtaccgtcc
      841 ggattaccag cccctgggtg aaccactaaa tccttcggtt tattaatgac gataatatcg
      901 tcatcttcat acacaatatt tagaggaata tcttgaggct caaaacgaat ttcctcttct
      961 atttcagcgg taatttcaac agtttcacca ccaaatactt tttcccttgc tttattcacg
     1021 atattgccat taactttcac tagatcactt tcaatccaca ctttaatgcg tgaacgagaa
     1081 tagtccggaa aaagttgtgc cagagcctga tctaggcgag cacctagtaa atctgcagta
     1141 atttctgctg ttaaaatctt ttgttgagtc attaaaccat aaatcctaat tagtcatttg
     1201 cttacttgcg tgatgttata tagaatagcg agatgaactt cataagttat tcttagtcag
     1261 aggacattgt acattaactt ttcgtcctag acacttttta taggtaaaac atatgcgtaa
     1321 atttaaatct cttgccacat tagtattagc cggactgttt gttgcaggtt gttcaaattc
     1381 aaataaagaa ttagaacaat ccaacgttca agatctttat ggcaaaggtc agacctattt
     1441 acaagatgga gattataatt ctgccattcg ctacttagaa gcggttggaa ccaaaggagg
     1501 ccaatattca ggacttggtg agcaaaccca actaagttta atttatgctc aatataaagt
     1561 tggcgaatac tataaagcac ttgatgccgc agaacgtttt gctcgctctt acccgaatgc
     1621 agctaatatg gattacgtat tctatctagc aggattatca aatgcacgtc taagtgataa
     1681 ttttattcaa gacttctttg gtgtaaatcg cgcctctcga gccgtagata atgttcgtaa
     1741 tgcttacggt aacttccaaa ctattgtaca gcgctaccct caaagccaat atgcacaaga
     1801 tgctcaaaat tggatgaatt acttatttaa ccgtttagcg gaacacgaat tagccgttgt
     1861 taaattttat gatgaacgta atgcctatgt ggctgtagta aaccgtatcg aagaaatgtt
     1921 gcgtttttac ccgaatacac tggcaaccaa acaagcattg ccatacttaa aagaagcata
     1981 taagcaaatg aatatcccag atgcagagca aaaaacggaa ctcttgatcc aagaatatga
     2041 aagcaaagag ctaccgaatc ctgaaaaact gaagtatggc gaacaattct agtcgtacag
     2101 agaataatgt gaggggcgtt cttcgcccct tttggttttc taacttattt tgacttctcc
     2161 aactatgcga attttaggta ttgaaacctc ttgtgatgaa accggtgttg ccatttatga
     2221 tgaagacaaa ggcttagtgg caaaccagct ttatagccaa attgatatgc acgccgatta
     2281 cggtggcgta gtccctgaac tggcttctcg agaccatatc cgtaaaacgt tgccactaat
     2341 tcaagaagcc ttaaaagagg ccaatctgca accctcggat attgacggca ttgcctatac
     2401 tgccggccca ggcttggtcg gggctttatt ggtcggctca accattgccc gttcgctggc
     2461 ttatgcttgg aatgttccgg cattgggcgt tcaccatatg gaagggcatt tacttgcccc
     2521 aatgttggaa gaaaatgccc ctgaatttcc gtttgtggca ttattgattt caggtggaca
     2581 cacccaactg gtaaaagttg acggcgttgg gcaatacgaa ctactcgggg aatcaattga
     2641 tgatgctgcc ggtgaagcct ttgacaaaac aggcaaacta ctcggtttgg attaccctgc
     2701 cggtgtagcg atgtcaaaat tagccgaatc cggcacgcca aatcgtttta aattccctcg
     2761 tccaatgacc gacagaccgg gactggattt cagtttctcc ggtttaaaaa cctttgctgc
     2821 gaatacgatt aaagccaatc ttaatgaaaa tggtgaactc gatgagcaaa ccaaatgcga
     2881 tattgcccac gcattccaac aagccgtggt tgatactatt ttaattaaat gcaagcgagc
     2941 gttagagcaa accggctata aacgcttagt aatggcaggc ggcgtaagtg ccaataaaca
     3001 attacgagca gaccttgcgg aaatgatgaa aaaattaaaa ggcgaagtat tctaccctcg
     3061 cccacaattt tgcactgaca acggcgcaat gattgcctac actggctttc ttcgcttaaa
     3121 aaacgatgaa caaaccgact taagcattag cgtaaaaccc cgctgggcta tgaccgaatt
     3181 accaccgatt aattaacctt tcaagcggtg aaatttcttg ttaattttgc aaaaatttaa
     3241 tcaaaaataa ccgcttgcta tatgatagat taaatttatg aataattatg taattagcct
     3301 aacctccgca caggagcgta gaaaacatat tgaagctgaa ttcggcaaac aaaatattcc
     3361 ttttcaattt ttcgatgcga ttacgccgga tttaattaaa gaaaaagcca aagcatttaa
     3421 tattgacatt tcaaatacaa acttaacaaa aggtgaaata gcctgtgctt tgagtcatat
     3481 tgcattatgg catttagcca aacaacagaa tttggattat atttgtattt ttgaaga
//
LOCUS       DANMCL010000143         3469 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.147, whole genome shotgun sequence.
ACCESSION   DANMCL010000143 DANMCL010000000
VERSION     DANMCL010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3469)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3469)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3469
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.147"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            162..353
                     /locus_tag="PXF40_002597"
     CDS             162..353
                     /locus_tag="PXF40_002597"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803871.1"
                     /translation="MGGFITRRKISMESHKTGNIITEQASKQASKQASKQASKQSVAQ
                     FKQAPLPFTGQKRMFLKHF"
     gene            complement(536..2131)
                     /locus_tag="PXF40_002598"
     CDS             complement(536..2131)
                     /locus_tag="PXF40_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HDL5803872.1"
                     /translation="MRLSQLSLSVLLLSASSLVAAAPVNTLINCVATPPMKLSPAITN
                     DANDFNASSQQIYNRLLAFKAGELTVEPSLAERWEISDDGLSYTFHLRKDVKFHSNKQ
                     FTPTRTLNADDVVFSFQRQMDLNHPYHKVSDGTYFYYHWMNLPKILKTVEKVDDYTVK
                     ITLQQPNAPFLTTLAMDFLSIYSKEYADKLLAEGKPELLDQAPIGTGPFVFQAYQTDQ
                     AVRYVANPDYFQGKAKFEKLIFSITPDAGTRYAKLKAGECDVIDFPNISDIAQMKQDP
                     KVNLLQRDGLNLAYIGLNSTKPALNNAKVRQALHYATDKKAIVEAVYQGGGTVASNPF
                     PDSVLGYNPNLPQYEFNLEKAKALLTEAGFADGFETEIWVQPVVRPSNPNPRRTAEII
                     QADWAKIGVKAKLVTHEWADFNKRTREGEFSTGTYGWTSRNGDPDNFLFPLLSKSNIP
                     GTNYGRWTDEKFEQLLAQAVQTQNRDERAKLYQQAVEIANEQTPFIPLAHAINYVPLS
                     KRVQGFVQNPFGYTPFYGVSLSE"
     gene            2280..2720
                     /gene="mioC"
                     /locus_tag="PXF40_002599"
     CDS             2280..2720
                     /gene="mioC"
                     /locus_tag="PXF40_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005605493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HDL5803873.1"
                     /translation="MTSICIITGSTLGGAEYVADHINEVLSEQGFEVELFNQATLADI
                     EGKTNLIIVTSTHGAGELPENIQQLFDDLANSSADFSSMKFGVIGLGSSDYDTFCNAV
                     NIVEEALKAKGASQVCESLRIDVMNNFDHDGSAEEWLPSFVEQL"
     gene            2732..2899
                     /locus_tag="PXF40_002600"
     CDS             2732..2899
                     /locus_tag="PXF40_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1232 domain-containing protein"
                     /protein_id="HDL5803874.1"
                     /translation="MNKISANKAKWIKIAIILIYMFSPVDILPEAILGPFGLVDDAAA
                     LMLLIKTILEK"
     gene            complement(2988..3461)
                     /gene="asnC"
                     /locus_tag="PXF40_002601"
     CDS             complement(2988..3461)
                     /gene="asnC"
                     /locus_tag="PXF40_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HDL5803875.1"
                     /translation="MYSKNTTKSEIDKLDQKILRWLIKDARTPYAEMAKVFGVSAATI
                     HVRVEKMRQAGIIESTKIVVDERKVGYDVCCFIGIILKSAKDYDKVIAKLSEFNEVVE
                     AYYTTGNYSIFIKVMTHTIEELHSVLAGKIQSIDEIQSTETLISLQNPISRDILP"
BASE COUNT         1041 a          710 c          699 g         1019 t
ORIGIN      
        1 tgcgccagcc aatatcaata gttgctgtca tcagcatgac cgagactacg gtatcaaggg
       61 cacagtcagc cgagccgaag ccgacaagcg gttaagacat tgcttaattt cgcaagggaa
      121 tccgattaag gcgtgggtgt tttgggttgt ggtgaggttg tttgggtgga tttattacaa
      181 ggagaaaaat atcaatggaa agtcataaaa caggaaatat cattactgag caagcaagca
      241 agcaagcaag caagcaagca agcaagcaag caagcaagca aagtgtagct caatttaaac
      301 aagctccgct accttttaca ggtcaaaagc ggatgttttt aaaacacttt taatgatgat
      361 ttaaagggcg tttgttttca gtttattttg cataactttt gtgattacgg ctatgcaaaa
      421 tgatttgcaa aactatgcaa aataaatcga ccgcttacaa ttctaaaaga aaagcagtct
      481 attctctacc acattttgca aaaaagtggc aaaaatagac cgcttgtatg gcatatcact
      541 ccgataaact caccccataa aatggcgtgt agccaaacgg attttgcaca aaaccttgca
      601 cccgtttgct gagtggtaca taattgatag cgtgagccag cggaataaat ggcgtttgtt
      661 cgttggcaat ttccaccgct tgttgataga gcttcgcccg ctcgtcacgg ttttgggttt
      721 gtacagcttg agctaataac tgctcaaatt tctcatccgt ccaacgccca taatttgttc
      781 ccggaatatt agatttgctt aataaaggga agaggaaatt atcaggatca ccattacggc
      841 ttgtccaacc ataagtgccg gtagagaact cgccttcacg ggtgcgtttg ttaaaatccg
      901 cccattcgtg ggtcactaat ttcgctttca ccccgatttt cgcccaatcc gcctgaataa
      961 tttcagccgt tcgacgtggg tttgggttag aagggcgcac taccggttgt acccaaattt
     1021 ccgtttcaaa tccatcggca aagccggctt ctgttaatag ggctttggct ttttcaaggt
     1081 taaattcata ttgcggtaaa tttggattat agcccaacac cgaatcaggg aacggattac
     1141 ttgccaccgt gccaccgcct tgataaacag cctcgacaat cgctttctta tcggttgcat
     1201 aatgcaaggc ttggcgaact ttggcgttat ttaatgccgg tttggtgctg tttaagccga
     1261 tataagctaa attcagcccg tctctctgta acaaattcac cttcggatct tgtttcattt
     1321 gggcaatatc ggaaatattc gggaaatcaa tcacatcgca ttcacccgct ttcagtttgg
     1381 cataacgagt gcccgcatca ggggtaatac taaaaatcag tttctcaaat tttgctttac
     1441 cttggaaata atccgggttc gcaacataac gcaccgcttg atcggtttga taggcttgga
     1501 acacaaaagg ccctgtgccg atcggggctt gatccaataa ctccggcttg ccttccgcca
     1561 gcaatttatc cgcatattct tttgaataaa tcgacaagaa atccatcgct aaggttgtca
     1621 gaaaaggagc attaggttgc tgtaaggtga ttttaacagt gtaatcgtcc actttttcca
     1681 ctgtttttaa aatcttcggc aaattcatcc aatggtaata gaaataagta ccgtcagaga
     1741 ccttatggta agggtggttt aaatccatct ggcgttggaa cgagaacact acatcatccg
     1801 cattcagcgt tcgagttggc gtaaattgtt tattggaatg aaatttcacg tctttacgta
     1861 aatggaatgt gtaacttaag ccatcgtcac tgatttccca acgttccgcc aaactcggct
     1921 caaccgttag ttcaccggct ttaaacgcta ataagcgatt ataaatttgt tgtgaactgg
     1981 cgttgaaatc attggcatca ttagtaattg caggactaag tttcatcggt ggagttgcca
     2041 cgcaattaat caacgtattt accggagctg ctgccaccaa actgctggca cttaagagta
     2101 aaacagaaag agataattga gaaagacgca taaagactcc ttaacatttt ctactaactt
     2161 actcggcatt aacgtatttt caaaataact aaaggttata atttataatc agaataatca
     2221 gttgcaaacc aatgattctt ggctagaata ttggcagttt tttaaacgag agatttacta
     2281 tgacatcaat ttgtatcatc accggcagca ccttaggcgg tgcggaatat gttgccgatc
     2341 acattaatga ggtattaagc gaacaaggtt ttgaagtgga actgtttaac caagccaccc
     2401 ttgccgatat tgagggcaaa accaatctga ttatcgttac ctctacccac ggagccggcg
     2461 agttacccga aaatatccaa cagctatttg acgatttagc aaatagctcg gctgatttca
     2521 gcagtatgaa atttggtgta atcggtttag gtagctccga ctatgacacc ttctgcaatg
     2581 cagtaaatat tgttgaagaa gctctcaaag cgaaaggggc aagccaagtt tgcgaatcac
     2641 tgagaattga tgtaatgaat aatttcgacc acgatggcag tgctgaagaa tggttaccat
     2701 catttgttga acaattataa cttaagtatc aatgaacaaa atcagtgcaa ataaggcaaa
     2761 gtggattaaa atcgctatta tcttaatcta tatgttcagc cctgtagata ttctacccga
     2821 agcgatttta ggcccattcg gtttggttga tgatgccgcc gcattaatgc tattgattaa
     2881 gactattttg gaaaaatagg catagtagac aaaatagttg caaaaaacca aaacaaaacg
     2941 accgcttgta acccaataca agtggtctta tcttttactt aattctttta agggagaata
     3001 tctcttgaaa taggattttg aagtgaaata agcgtttctg ttgactgaat ttcatcaata
     3061 gactgaattt ttcctgctaa taccgaatgc aactcttcga tggtatgggt cattacttta
     3121 ataaaaatag aataattacc agtggtatag tacgcctcaa caacttcatt aaattcacta
     3181 agtttagcaa ttactttatc ataatctttg gctgatttta aaataatgcc aataaagcaa
     3241 cacacgtcat acccaacctt acgctcgtcc actacgattt tggtagattc aataatgccg
     3301 gcttggcgca ttttttcaac acggacatgg atagttgcgg cactcacacc aaaaactttt
     3361 gccatttccg cataaggcgt gcgagcatct ttaattagcc aacgtaaaat tttttgatcc
     3421 agcttatcaa tttccgattt agtcgtgttt ttactgtaca ttttttctc
//
LOCUS       DANMCL010000144         3445 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.148, whole genome shotgun sequence.
ACCESSION   DANMCL010000144 DANMCL010000000
VERSION     DANMCL010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3445
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.148"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..389)
                     /locus_tag="PXF40_002602"
     CDS             complement(<1..389)
                     /locus_tag="PXF40_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5803876.1"
                     /translation="MSIKKVTLASLILLGLTACSSGGSGSSSNNVAKPNTKPQTTQQQ
                     TDKAAAEKAAKDKAAKEKAEAERLAAEKAAKEKAEAERLAAEKAAKEKAEAERLAAEK
                     AAKEKAEAERLAAEKAAKEKAEAERLAA"
     gene            592..2046
                     /locus_tag="PXF40_002603"
     CDS             592..2046
                     /locus_tag="PXF40_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-histidine dipeptidase"
                     /protein_id="HDL5803877.1"
                     /translation="MSEISTLAPQLLWQWFDKACAIPHPSYHENELAEFIVNWAKSKN
                     FFVERDEVGNVLIRKPATKGMENRQTVALQAHLDMVPQANTGTVHDFTKDPIQPYIDG
                     EWVKAKGTTLGADNGIGLASCLAVLDSDDLAHPTIEVLLTMTEEAGMEGAIGLRPNWL
                     TADIMINTDTEENGEIYIGCAGGENVNVTLPIFLVPHQQDSAVTVTLKGLNGGHSGCD
                     IHTTRANAIKVFARILEQAHNEVEFQIAEIQGGSVRNAIPREAHATLVFSAKNQQKLT
                     ACLSQTAEQVKAELKIAEPNFQFLIEEAQLPEQAFDLASTARVIHFLNVMPNGVVRNS
                     DVVENVVETSLSIGVLNTEASEVKATILARSLIEGGKEEIRSKIRSLTALVGAEVEFS
                     GNYPGWEPNPNSKITPLTKAIYDEILGYESQIKVIHAGLECGLINKIYPNMDFVSIGP
                     TILNAHSPDEKVHIPAVEIYWKLLTKLLEQAPEK"
     gene            complement(2121..3410)
                     /locus_tag="PXF40_002604"
     CDS             complement(2121..3410)
                     /locus_tag="PXF40_002604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HDL5803878.1"
                     /translation="MDIRQKIAHNKMTSFQWLVVGLTVLLNMLDGFDLMALAFTAKSI
                     REELQLDGAAIGSLMSAGLFGMAIGSLFLSPLADKFGRRPLLLIGTGLATLGMLLTYF
                     ATSAFEIGVWRVLTGLGVAAILTGTNVLVSEYSSQKWRGLAIAIYASGFGIGAMLGGM
                     SAVLLQGEYGWRAVFLVGSILTGAVFVLLFFVLPESVEFLISKHPVNAKARLNQIAVK
                     LGLGNGWELPEIEAKSKSKVAITRLFEPEYRRNTLLIWLAFIAISASFYFISSWTPAL
                     LEEAGMPKTQSQTVGMAISVGGTIGSLIFGFLVSRWAAKHILQAFSILAASAVVAFVF
                     AGNLGLAITLAILVGGLINGCITGLYTINPTLYAPDFRSTGVGTAIGVGRLGSIVSPT
                     LAGILLDAGWKKNELYLGAAVVLLIAAFTVHFLKQRK"
BASE COUNT         1013 a          792 c          717 g          923 t
ORIGIN      
        1 gccgctaaac gttctgcttc cgctttctct ttcgccgctt tttccgccgc taaacgttct
       61 gcttcggctt tttctttcgc tgctttttcc gccgctaaac gttccgcttc ggctttttct
      121 ttcgctgctt tttccgccgc taaacgttct gcttccgctt tctctttagc tgctttttct
      181 gctgctaaac gttctgcttc tgctttctct ttcgctgcct tgtcttttgc tgctttttct
      241 gctgccgctt tatcggtttg ttgctgagta gtttgcggtt tagtattcgg ttttgccaca
      301 ttgtttgagc tactgcccga accaccacta ctacacgccg ttaaacccaa taaaatcaaa
      361 ctggctaaag ttactttttt gatagacata aaatgttcct tttgtaagat aaacaaaaat
      421 agatgtgtat aaaacacacg catattgtac aaaaaaaaaa caactcgtca tcaagtactt
      481 tttaagattt ttttgttaaa tttctcctaa atattctaca atgtcagagg tctatatcag
      541 cttgaataca agcggttatt ttttcttaaa attttacaaa aggggcttat tatgtctgaa
      601 atctcaacgc tcgcaccgca gctactttgg cagtggtttg ataaagcctg tgctattccg
      661 cacccgtctt accacgaaaa tgaactggct gaatttattg tgaattgggc aaaatcgaaa
      721 aatttctttg ttgaacgtga tgaagtgggt aatgtgttaa tccgtaaacc ggcaactaaa
      781 ggtatggaaa accgccaaac tgtcgctctg caagcccatc ttgatatggt gccacaagcc
      841 aataccggca cggttcacga tttcactaaa gatccgattc agccttatat tgacggcgaa
      901 tgggtaaaag ccaaaggcac aacattgggg gcagataacg gcattggatt ggcttcgtgc
      961 ttggcggtgt tggatagcga tgatttagcc cacccaacca ttgaagtgtt gctcacaatg
     1021 accgaagaag ccggtatgga aggggcgatt ggtttacgcc cgaactggct aaccgccgat
     1081 attatgatta acaccgacac cgaagaaaac ggggaaattt acatcggctg tgcaggtggg
     1141 gaaaatgtga atgtgacact gccaattttc ttggtgcctc atcagcaaga tagtgcagta
     1201 accgttacgc ttaaaggcct aaacggcggg cattcgggct gtgatattca caccacccga
     1261 gcgaatgcga ttaaagtgtt cgcccgcatt ttggaacaag cccacaacga agtggaattc
     1321 caaattgcag aaattcaagg cggttcggtg cggaatgcca ttccacgaga agcccacgca
     1381 accttggttt tctctgcaaa aaatcagcaa aaattaaccg cttgtttaag ccaaaccgcc
     1441 gaacaagtaa aagcagaact caaaattgcc gagccaaact tccaattttt aattgaagaa
     1501 gctcaactgc ctgagcaagc ctttgacctt gccagcactg ctcgagtaat ccatttctta
     1561 aatgtgatgc caaatggtgt ggtgcgtaat agcgatgtgg tggaaaatgt ggtggaaacc
     1621 tcactcagta ttggtgtgct taacaccgaa gcgagtgagg tgaaagcgac cattcttgcc
     1681 cgctcattaa ttgagggcgg aaaagaggaa attcgcagta aaatccgctc attaaccgca
     1741 ttagtgggag cagaagtgga attttcgggc aactacccgg gctgggagcc aaacccaaat
     1801 tccaaaatca cgccattaac caaagcgatt tatgatgaaa ttttaggtta tgaatctcaa
     1861 attaaagtga ttcacgcagg gctagaatgt ggcttaatca acaaaatcta cccgaatatg
     1921 gattttgtct cgattggacc aactattctc aacgcccatt ctccggacga aaaagtgcat
     1981 attccggcag tggagattta ttggaaactc ctaaccaaac tacttgaaca agcacctgag
     2041 aaataaattt aatcaaaaaa attatataat cttgccccgt aattaattga ataaaacctc
     2101 aattaattac ggggtagctc ttattttctc tgttttaaaa aatgtaccgt gaaagcagca
     2161 attaataaga cgactgctgc acctaaataa agctcgttct ttttccagcc ggcgtctaat
     2221 aaaatacctg caagagttgg ggaaacaatt gagcctaaac gccctacacc gatggcggtg
     2281 cctacgcccg tgctgcggaa atccggtgcg tatagggttg ggttaatggt ataaagcccg
     2341 gtaatgcagc cgttaattaa tccgccaacc aaaatggcta gtgttatcgc aagccctaaa
     2401 ttgccggcaa acacaaaggc aaccacagca gatgcagcca gaatactgaa tgcctgcaaa
     2461 atatgttttg ccgcccagcg actgactaaa aagccgaaaa ttaacgagcc gattgtacca
     2521 ccaactgaaa ttgccattcc cacagtttgg ctttgggttt taggcattcc ggcttcttct
     2581 aatagtgccg gagtccaaga gctgataaag taaaatgagg ctgaaattgc aataaaggca
     2641 agccaaatta gcaacgtatt gcggcgatat tcaggctcga ataaacgggt aattgccact
     2701 ttgcttttac tttttgcctc aatttcagga agttcccagc cgtttcctaa gcctaattta
     2761 acggcaattt gatttaaacg agctttagca ttcaccgggt gttttgaaat taaaaattcc
     2821 accgattcgg gcaatacaaa gaataataaa acgaataccg caccggttaa aatcgaccca
     2881 acgaggaaaa ccgcacgcca gccatattct ccttgcaata acaccgcaga cattccgccc
     2941 agcattgcac caatcccaaa gcctgaggca taaattgcaa tcgctaagcc acgccatttt
     3001 tggctggagt attcactcac tagcacatta gtgccggtta aaatggcggc tacgcctaaa
     3061 ccggttaaaa cacgccatac accaatttca aacgcagaag tagcgaaata agttaggagc
     3121 attcctaacg tggctaagcc tgtgccgatt aaaagcaacg ggcggcgacc aaatttatca
     3181 gcaagtggtg aaagaaagag tgagcctatc gccataccga ataaaccggc actcattaag
     3241 ctgccgatgg ctgcaccgtc taactgcaat tcttctcgga tgcttttggc ggtaaaggcg
     3301 agtgccatta aatcaaagcc gtccagcata ttaagtaaca ccgtaagccc aaccactaac
     3361 cattggaatg aagtcatttt gttatgagca attttttgac gaatatccat aagctccctc
     3421 tgcatcaaaa ttgataaaat tttat
//
LOCUS       DANMCL010000145         3417 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.149, whole genome shotgun sequence.
ACCESSION   DANMCL010000145 DANMCL010000000
VERSION     DANMCL010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3417
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.149"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..461
                     /locus_tag="PXF40_002605"
     CDS             <1..461
                     /locus_tag="PXF40_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HDL5803879.1"
                     /translation="SDKVKVVTLSEFNLKNYLDDEVSYTYFTDDNVLNYRNSIYGLVA
                     TLNYCNTEAVTRRLYYKLSSLNKIMDFSITQEDWYRSVTETQRNCVLIKNSAIEDYSI
                     NLTANKIQAKNSPIFIADPFNVLYIDDKKLLKGRDSLLKLVYKTSPYLGV"
     gene            463..1530
                     /locus_tag="PXF40_002606"
     CDS             463..1530
                     /locus_tag="PXF40_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803880.1"
                     /translation="MKFILFDSILERHLGESLKRALESLGHQAVFTDLILHGHSMIYK
                     QADIDFMWKKVKDICDEKADMFISFRPMNLTTEMLEYIGKRMKTAIWLSDDPVLYKTC
                     YSQVVNHYDVLLHCGYKEVMDFYEANNHPKGFNFPFWTDHVAFPSVYNPLHSDYEIAF
                     LGNMNGQVRRKRYMELASLPFTKKVFGLIDSDPLAMHGGFINEAYLHTKRVTEVLSKA
                     KVGVSIPQFFTEYNGLDYDYPELAGLGYFQFPSRVIQYAASGLPIAAVGDERMKEVYP
                     EIFVGNSITELEPYIKQICEDYDFALSESAKILTRFRKNYSALSRAMMLIDLVENLDK
                     LQSQTTQERAILFTKYKAQYN"
     gene            1542..2348
                     /locus_tag="PXF40_002607"
     CDS             1542..2348
                     /locus_tag="PXF40_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803881.1"
                     /translation="MNIKDLLKEISFKAVINDLNFSSCLYIKPNTSKLYVILNGALIK
                     EPRNPLIYHRHSWHLEFDGSVLYIADPTLFKYESINLAWYVGDKDTDLYPYLAEFVTS
                     VATHLNVETDHIVTYGSSGGGFAALQLGARIGNGVVTVCINPQTNIMKYVPSHRNAFL
                     NACFDFNAEEYDSLSNQEKFNALVLLKENTSKILYIQNTQDEFHHKWHFLPFLELKGI
                     DLSEIEKTHWREQQSKDVKVILYSHESGHAAEPKEMIPEILSAVDQLIAS"
     gene            2350..3345
                     /locus_tag="PXF40_002608"
     CDS             2350..3345
                     /locus_tag="PXF40_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015586968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5803882.1"
                     /translation="MLFYLVSDSLTRLSLSNESLVDLGRITSIGNYPFLHNAKNAKFL
                     MVESAWQGYKNRWKYKIASYPDNPERTNEKLVRLVEKAKDKGIPTVFWNKEDSVHFDR
                     FIDSAKHFDHIFTVDQNAIARYREVVPATTTVNVGMFPVQPKIHNFQGFNFKHLAANF
                     VGSYSHHIHNKRRERQDMLFGAALKAGLPVTIFDRNSDRKSENYRYPKNSFNLNVQPN
                     VSYTETANIYRDYLVSLNINTVEDSPTMFSRRVVEILACGGILVSTPSMAIDNIFKEY
                     CHIVQSEDEAIELFQRLKRGASRDDLNKAIAGSEFVLSNFTWEHFLSQIQKVVYR"
BASE COUNT         1152 a          514 c          618 g         1133 t
ORIGIN      
        1 attccgataa agtgaaagta gttactcttt ctgagtttaa tctgaaaaac tatttagatg
       61 atgaagtttc ttacacttat ttcaccgatg ataatgtcct aaattatcgt aattctattt
      121 atggattggt agcaacactt aattattgta atacagaagc agtaaccaga agattgtact
      181 ataaattatc atcattgaat aaaataatgg acttttcaat tactcaggaa gactggtaca
      241 gaagtgttac agaaactcaa cgtaattgtg ttttaattaa aaatagtgct attgaagatt
      301 attcaatcaa tcttacggcc aataaaattc aggctaaaaa ttcacctatc tttatagctg
      361 atccatttaa tgtgctatat atagatgata aaaagttatt gaaaggtaga gattccttac
      421 ttaaattggt ttataagact tctccatatt taggggttta atatgaagtt tattttattt
      481 gattctattt tagaacgtca tttgggcgaa agtttaaaaa gagctttgga gtcgttaggg
      541 catcaagcag tatttacaga tttaattttg cacggccatt ctatgattta taaacaagcg
      601 gacatagatt tcatgtggaa aaaagtaaaa gatatttgtg atgaaaaagc agatatgttt
      661 atctcatttc ggccgatgaa tctaacgaca gaaatgcttg agtatatagg caagcgaatg
      721 aagaccgcta tttggctttc agatgaccct gttttatata aaacttgcta ttctcaagta
      781 gtaaatcatt atgatgtatt attacattgc ggatataaag aagttatgga tttttatgaa
      841 gctaataacc atccaaaagg ctttaatttt ccgttttgga cagatcatgt agcatttcca
      901 agtgtatata acccgcttca ttctgattat gagattgcat ttttaggtaa tatgaatggg
      961 caagttagac gcaaaagata catggaattg gcttcattac catttaccaa aaaagtattc
     1021 ggtttaatag attcagatcc attagcaatg catggtggat ttatcaatga agcatattta
     1081 catacaaaac gtgtaacaga ggttttatct aaggcaaaag ttggggtgag tatcccacaa
     1141 ttctttaccg aatataatgg tttagattat gattatcctg aattggcggg tttaggatat
     1201 ttccaatttc ctagtcgagt tatccaatat gctgcaagtg ggttacctat tgcagcggtt
     1261 ggtgatgaga gaatgaagga agtttatcct gaaatctttg ttggcaatag tattacagag
     1321 ctggagccgt acattaaaca aatttgtgaa gattatgatt ttgcactatc agaatcggct
     1381 aaaattctaa ctagatttag aaagaactat tctgccttat cccgtgccat gatgttgatt
     1441 gatttggtag aaaatttaga caaactacag agccagacaa cacaagagcg cgcaatttta
     1501 tttactaaat ataaagctca atacaactag gagtaaactt tatgaatatt aaagacttac
     1561 ttaaagagat cagctttaaa gctgtaatta atgatcttaa tttttcatcg tgtctatata
     1621 tcaaacctaa tacatcaaaa ttatatgtga tattaaatgg tgcattaatc aaagaaccca
     1681 gaaatccctt aatttatcat agacatagtt ggcatctaga atttgatggc tcagttctat
     1741 atatcgcaga tccaacatta tttaaatatg aatcaattaa tttggcttgg tatgttggag
     1801 ataaagatac tgatttatat ccatacttag ctgaatttgt aacttctgtt gctacacatt
     1861 tgaatgttga gacagaccat attgttactt atggttcaag tggtggtgga tttgctgcat
     1921 tacagttggg agcaagaatt ggaaacggtg tagttaccgt ttgtattaat ccacaaacca
     1981 acatcatgaa atatgtacca agtcatcgta atgccttttt aaacgcttgc tttgacttta
     2041 atgcggaaga gtacgatagt ctttctaatc aagagaaatt taatgcttta gtattactta
     2101 aggaaaatac atcaaagatt ttgtatattc aaaatactca ggatgaattt catcataaat
     2161 ggcatttcct cccattccta gagttaaagg ggatagatct atcggaaata gaaaagaccc
     2221 attggagaga acaacagagc aaagatgtaa aagttatttt gtattctcat gaatcaggtc
     2281 atgcagctga acctaaggaa atgattcccg agatattatc cgctgttgat caactgatag
     2341 ctagctaaaa tgctgtttta tttggtatct gattctttaa ctaggctttc attatcaaat
     2401 gaaagcctag ttgatcttgg aagaataaca tctataggaa attatccttt cttgcataat
     2461 gcaaagaatg ctaaatttct tatggtcgaa tccgcctggc aaggctacaa aaaccgttgg
     2521 aaatataaaa ttgcctctta tcctgataat cctgaacgaa ccaatgaaaa gttggttcgt
     2581 ttagtagaaa aagcgaagga taaaggcatt ccaacggtct tttggaacaa agaagattct
     2641 gtgcattttg atcgatttat tgattcggcg aagcattttg atcatatttt taccgtagat
     2701 caaaatgcca ttgctcgtta tagggaagta gtgcctgcga caacaaccgt caatgtcgga
     2761 atgttccctg ttcagcccaa aatccataac tttcaaggat ttaattttaa acaccttgcc
     2821 gcaaattttg tagggagtta cagtcatcat atccacaata agcgtagaga aagacaggat
     2881 atgttgtttg gtgcagcact taaagcaggt cttccggtaa ccatctttga tagaaactct
     2941 gatagaaaat cggaaaatta tcgttaccca aaaaatagct ttaatttaaa tgttcaacct
     3001 aatgttagtt atactgaaac tgctaatatt tatcgtgatt atcttgtttc tttgaatatt
     3061 aatactgtcg aagattcccc tacgatgttt tctcgcagag tcgttgaaat attagcttgt
     3121 ggaggaatat tagtctctac accaagtatg gctatcgaca atatatttaa agaatattgt
     3181 catatcgtac aaagtgaaga tgaggctata gaattattcc aacgtttaaa acgaggtgct
     3241 tctcgtgatg atttgaataa agcgattgca ggctctgaat ttgtattgag taactttact
     3301 tgggaacatt tcttatccca aatacagaaa gttgtatata ggtaacttaa atagcattat
     3361 taaaaactct ctgccaagaa attattttct atttcgagta attaattagg ggaaatt
//
LOCUS       DANMCL010000146         3264 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.151, whole genome shotgun sequence.
ACCESSION   DANMCL010000146 DANMCL010000000
VERSION     DANMCL010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3264)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3264)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3264
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.151"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            6..842
                     /locus_tag="PXF40_002609"
     CDS             6..842
                     /locus_tag="PXF40_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012621753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HDL5803883.1"
                     /translation="MLFACINTLIPKLTSISPIDSNVIALVQYLAAFIFLVPSMNNIG
                     FFSSLKTEHFGQHCFRIFLSAIGIQCWTMALANQLPIWQGIALLMTSPLFVTIGSGLF
                     LKEKVDKKRWIATAMGFVGAMIILEPWSDHFEMIALLPIAAAFFWAGYSLMVKKLSRY
                     DSPTTMVAYLFILITPFNLLIALTNLSPSGFSLPSWSDFGFLILLGFFTALAQLAVAK
                     AYSVADASYIQPFDFIKLPLNVLAGWLVFNWVPPGKLWLGAAIIIAATIYITHAETKQ
                     SN"
     gene            complement(921..1412)
                     /gene="ilvN"
                     /locus_tag="PXF40_002610"
     CDS             complement(921..1412)
                     /gene="ilvN"
                     /locus_tag="PXF40_002610"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005647229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HDL5803884.1"
                     /translation="MRRTLAVLLENESGALSRVVALFSQRGFNIESLTVAPTDDPSLS
                     RMTIVAQGEEQVLEQIEKQLHKLIDVFKVSNLSAYEHVEREVLLVKVRATGSSRDELK
                     RMVDIYRGQIVDLTPKLYTIQLSGSTEKLNAFIEAVKEETTIVEIVRSGVISLSRGDK
                     NAL"
     gene            complement(1405..3126)
                     /locus_tag="PXF40_002611"
     CDS             complement(1405..3126)
                     /locus_tag="PXF40_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018651963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HDL5803885.1"
                     /translation="MKKLSGAEMIVQSLKDEGVEYVFGYPGGSVLDIYDAIHTLGLNH
                     VLVRHEQGAVHMADGYARSTGKVGCVLVTSGPGATNTITGILTAYTDSVPLVILSGQV
                     PSSLIGTDAFQESDMIGISRPVVKHSFLVKNTEEIPEIIKKAFYIASTGRPGPVVIDI
                     PKDVVNPLNKYPYEYPQEVSMRSYNPTVQGHKGQIKKALKALLVAKRPVLYVGGGVIS
                     AEGSPEITEFAQKLNLPVTCSLMGLGAYPASDKQYLGMLGMHGTFEANNAMHESDLIL
                     GIGVRFDDRTTNNLAKYCPNAKVIHVDIDPASISKTVQAYIPIVGSAKDVMEEFLSLL
                     GEENLAKNQVDLTAWWQQIDAWKARNCLAFEENSDVIKPQQVIRMIHKLTNGEAYVAS
                     DVGQHQMFAALHYGFDKPRRWINSGGAGTMGFGLPAAMGVKFAHPDATVVCVTGDGSI
                     QMNIQELSTAKQYDTPIVIVSLNNRFLGMVKQWQDIIYSGRHSQVYMNSLPNFAKLAE
                     AYGHVGIQIDHPSELEAKLTEAFSIKDKLVFVDVLVDETEHVYPMQVRGGAMNEMMLS
                     KTERTDA"
BASE COUNT          900 a          700 c          610 g         1054 t
ORIGIN      
        1 ccggtgtgtt atttgcctgt atcaatacct taattcccaa attaacgtcc atttcaccga
       61 ttgactcgaa cgtgattgca ttggtgcaat atttagctgc ctttattttc ctcgttccca
      121 gcatgaataa tatcggtttc ttctcttcat taaaaaccga gcattttggg caacactgtt
      181 tccgtatttt tctatctgcg attggtattc aatgttggac aatggcactc gctaaccaat
      241 tacctatttg gcagggaatt gcgttattga tgacttctcc attgtttgtg accatcggct
      301 ccggtctgtt tttgaaagag aaagtggata aaaagcgttg gattgcaacc gcaatggggt
      361 ttgttggggc gatgattatt ctagagcctt ggagcgatca ttttgaaatg attgcgttac
      421 tgccgattgc cgcggctttt ttctgggcag gttattcgct aatggtgaaa aaactctctc
      481 gttacgatag cccaactacg atggtcgctt acctgtttat tctaattacg ccttttaatt
      541 tgttgattgc actcacgaac cttagcccta gtgggtttag tctgccttct tggagcgatt
      601 tcggcttttt aatcttactt ggtttcttta cggcgttagc gcaactggcg gtagccaaag
      661 cctacagtgt agcagatgct tcctacattc agccgtttga ttttattaaa ttacctttga
      721 acgtattagc cggttggctt gtatttaact gggtgccacc gggtaaatta tggctaggag
      781 ctgcgattat tattgctgcg accatttata ttactcacgc tgaaactaaa cagagtaatt
      841 agcaacaaat tcacgctaca taaaaatccc tttatctcaa agataaaggg atttgcaaat
      901 tttaagctaa aattgaccgc ttacagagcg tttttatcgc cacgagatag actaatcacg
      961 ccagagcgaa caatctctac aatcgttgtt tcttctttaa ctgcctcaat aaatgcattg
     1021 agcttctcgg tagaaccgga taattgaatg gtgtaaagtt tcggtgttaa atctacgatt
     1081 tgcccacggt aaatatctac catacgtttc agttcatcac gagatgaacc tgtagctcgc
     1141 acttttacca ataacacttc acgctcaacg tgttcataag cacttaagtt actcacttta
     1201 aacacatcaa tgagtttgtg tagttgcttt tcgatttgtt ctaacacctg ttcttcgcct
     1261 tgcgcgacaa ttgtcatacg ggaaaggctt ggatcatcag taggggcaac ggtcaagctt
     1321 tcaatgttaa aaccacgctg cgagaaaagg gcaactacac gagataatgc acctgattca
     1381 ttttctaata atacggctaa tgttctacgc atctgttctc tccgttttac ttaacatcat
     1441 ttcattcatt gctcctccac gcacttgcat tgggtaaaca tgttccgttt catcgaccaa
     1501 tacatcaaca aatacaagct tatctttaat tgagaatgcc tcagttaatt ttgcctccaa
     1561 ttcagaaggg tggtcgattt gaatcccaac gtggccataa gcctctgcta atttagcaaa
     1621 gttaggtaga gaattcatat acacctgtga atggcggcca gagtaaataa tatcttgcca
     1681 ctgtttcacc atacctaaga aacggttatt taagctgaca atcacaatcg gtgtgtcgta
     1741 ttgctttgcg gtggaaagtt cctggatatt catttggata ctaccatcac cggttacaca
     1801 aacaacagtg gcatcagggt gggcaaattt tacccccatc gcagcaggta agccaaagcc
     1861 cattgtgcct gcaccgcctg aattaatcca acgacgtggt ttatcgaacc cataatgcaa
     1921 tgcagcaaac atttgatgtt gtccaacatc tgaggcaaca taagcctccc cattggtcaa
     1981 cttgtggatc attctaatca cttgttgtgg cttaatcaca tcactgtttt cttcaaaggc
     2041 taagcaatta cgagctttcc aagcatcaat ttgttgccac caagcggtta aatctacctg
     2101 attttttgca agattttcct cacctaataa agataaaaat tcttccatta catccttagc
     2161 actgcctaca attggaatat aagcttgtac tgttttggaa attgaggctg gatcaatatc
     2221 cacgtggatc acttttgcat tcgggcaata ttttgctaag ttatttgttg tacgatcatc
     2281 aaaacgtacc ccaataccta aaatcaaatc actttcgtgc attgcattat ttgcctcaaa
     2341 agtgccgtgc atgcctaaca tacctaaata ttgcttatca gaggcaggat aagcacctaa
     2401 tcccattaat gaacaggtta caggtagatt tagcttttgt gcaaactctg taatttctgg
     2461 cgaaccctct gcactaatta caccaccgcc tacataaagc actggacgtt ttgctactaa
     2521 tagtgctttt aatgcttttt taatttgccc tttatgccct tgaactgttg ggttataaga
     2581 acgcattgat acttcttgcg gatattcata gggatattta tttaatggat tgactacatc
     2641 tttaggaata tcaataacta ccgggcctgg tcgaccggtt gatgcaatat aaaaggcttt
     2701 tttgataatt tcaggaattt cttctgtatt ttttactaag aaactgtgtt ttacaaccgg
     2761 acgagaaatg ccgatcatat cactttcttg gaatgcatct gtcccaatta aacttgatgg
     2821 aacttggccc gacagtatta ctaacggaac agagtcggta taagcagtta aaataccagt
     2881 aattgtattc gttgctcccg gacctgaagt cactagcaca cagccgactt tacctgttga
     2941 acgggcatag ccatcagcca tatgtacagc accttgctcg tgtcgaacta aaacgtgatt
     3001 caatccaagt gtatgaattg catcataaat atcgagtaca gagccacccg gatagccgaa
     3061 aacgtattct acgccttcat cctttaagga ctgtacaatc atttctgcac cagaaagttt
     3121 tttcattgaa tcctccaaca aaatagcatt ttcttctcta agatggttgg attttgcagt
     3181 aaaattttat tgatgtctag ttcttattat gggatcaaat gctagatttg ctagatttat
     3241 attctttttt atcttaaaaa gttg
//
LOCUS       DANMCL010000147         3234 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.152, whole genome shotgun sequence.
ACCESSION   DANMCL010000147 DANMCL010000000
VERSION     DANMCL010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3234)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3234)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3234
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.152"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            10..2721
                     /gene="secA"
                     /locus_tag="PXF40_002612"
     CDS             10..2721
                     /gene="secA"
                     /locus_tag="PXF40_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HDL5803886.1"
                     /translation="MTSIFGSSNDRTLKRLRKRVAQINKLEPTFEQLSDEALKDKTAE
                     FKQRLADGVSLDSLLPEAFATVREASKRVLGMRPFDVQLIGGMVLTGRNIAEMRTGEG
                     KTLTATLSCYLNALTGKGVHVVTVNDYLARRDAETNRPLFEFLGLTVGVNIPGLPSDA
                     KRAAYQADITYSTNSELGFDYLRDNLAHDKNERFQRELHYALVDEVDSILIDEARTPL
                     IISGPAEDATQIYQAVDQIIPHLIAQDKEDSEEYTGEGDFTLDLKNKQAHLTERGMVK
                     VEDFLTQMGLMEEGESLYHPARISLLHHVSAALRAHKLFERNVDYIVKDGEIVIIDEH
                     TGRTMAGRRWSDGLHQAIEAKERVAIQGENQTVASITYQNYFRLYEKLAGMTGTADTE
                     AFEFQQIYGLNTVVIPTNRPVIRDDRTDLMFKSEAEKFAAIITEIRDCIERKQPVLVG
                     TASVEKSELLSAELTKAGIAHNVLNAKFHAQEAEIVAEAGAPGAVTIATNMAGRGTDI
                     VLGGNWKMEVAKLENPTQEQIDAIKAAWQERYDIVMQAGGLHIIGTERHESRRIDNQL
                     RGRSGRQGDPGSSRFYLSLDDALMRIYLNEGKLNMMRKAFTEEGEAMESKLLTKVIAS
                     AQAKVEAHNFDGRKHLLQYDDVANEQRKVIYEQRNHLLETDNIASMIESIRQDVFEST
                     INQYIPPQSIEEMWNVPGLEERLRREFGLDLPISHWLETEKDLHEETLRERILNIAIA
                     EYNAKEEIVGAEVMRNFEKGVMLQNLDELWKEHLASMDYLRKGIHLRGYAQKDPKQEY
                     KKESFAMFTNMLDTLKLNVISILSRIQVRSKEEVEEAQRQQAEMDAASTPVTQATDSA
                     AGSREENSAESLSEEELANLNIGRNDPCPCGSGKKYKHCHGNKARYS"
     gene            2808..3206
                     /gene="mutT"
                     /locus_tag="PXF40_002613"
     CDS             2808..3206
                     /gene="mutT"
                     /locus_tag="PXF40_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014991833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HDL5803887.1"
                     /translation="MSKPIIQVSAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDP
                     NETPEEALKRELEEEIGIQVLSAFPYENFCFEYPTKIIEFFFYLVEEWVNEPYGREGQ
                     EGFWIAQSDLDEGAFPPANAQLIKRLKEHA"
BASE COUNT         1025 a          586 c          764 g          859 t
ORIGIN      
        1 tcaaaattac tgacttctat ttttggctca agcaacgatc gcactttaaa acgtttaaga
       61 aagcgagtgg cacaaattaa taagcttgaa ccaaccttcg agcaattatc tgatgaggcg
      121 ttaaaggata aaacagcgga gtttaagcaa cgccttgcag atggtgtatc gctagatagc
      181 ctattacctg aagcttttgc gacagtgaga gaagcaagca aacgagtatt aggtatgcga
      241 ccatttgatg tacagctgat cggcggtatg gtgctaacgg ggcgtaatat tgcagaaatg
      301 cgtactgggg aaggtaaaac cctaactgca actttatctt gttatttgaa tgctttgacc
      361 ggtaaaggtg ttcatgttgt tacggtgaat gattacctcg cccgccgtga tgcggaaacc
      421 aaccgtccgt tatttgagtt tttaggctta accgttggag tgaatattcc ggggttacct
      481 tccgatgcaa aacgtgctgc ataccaagca gatattacct attcgactaa cagcgaatta
      541 ggttttgatt acttgcgtga taacttagct cacgataaaa acgaacgttt ccaacgtgag
      601 ttacactacg cattagttga tgaagtagac tctattttaa ttgatgaagc tcgtacgccg
      661 ttaattattt cagggcctgc ggaagatgcg acccaaattt atcaagcggt agatcaaatc
      721 attccgcatt tgattgctca agataaagaa gacagtgaag agtacaccgg tgagggcgat
      781 tttaccttag atctgaaaaa caaacaggct catttaaccg agcgtggtat ggtgaaagta
      841 gaggatttct taactcaaat ggggttaatg gaagagggcg aaagtttata tcaccctgct
      901 cgtatttcgc tgttacacca tgtgagtgca gcattgcgtg cccataaatt atttgaacgc
      961 aacgtagatt acattgtaaa agacggtgaa attgtgatta ttgatgagca caccggtcgt
     1021 acaatggctg gacgtcgttg gtctgacggc ttacaccaag cgattgaagc taaagagcgt
     1081 gtggctattc agggcgaaaa ccaaactgtt gcctcaatta cttaccaaaa ctatttccgt
     1141 ttgtacgaaa aattagccgg tatgactggt acggcagaca ccgaagcctt tgaattccag
     1201 caaatttatg gcttaaatac ggtggtgatt ccaaccaaca gaccggtgat ccgtgatgac
     1261 cgtacagact taatgtttaa aagcgaagcg gagaaatttg cggcgattat tactgaaatt
     1321 agagactgta tcgagcgtaa acagcctgtt ttggttggca cagcatcggt ggaaaaatca
     1381 gagttattat cggcagaatt aaccaaagcc ggtattgctc ataacgtatt aaatgcgaaa
     1441 ttccacgctc aagaggctga aattgtagcg gaagcgggag ctccgggggc ggttactatc
     1501 gcaaccaata tggctggtcg tggtacggat attgtgcttg gcggtaactg gaaaatggaa
     1561 gtagccaagc ttgagaaccc gacacaagaa caaattgatg cgattaaagc tgcgtggcaa
     1621 gagcgttatg acatcgtaat gcaagccggt ggtttacata ttattggtac agaacgccac
     1681 gaatcccgcc gtatcgacaa ccagttgcga ggtcgttctg gtcgtcaagg tgacccgggg
     1741 tcatcacgtt tctatctctc tttagatgat gccctaatga gaatttacct caatgaaggt
     1801 aaattaaata tgatgcgtaa agcctttacc gaagaaggtg aagcgatgga gtctaaactg
     1861 ttaaccaaag tgattgcctc tgcacaggcg aaagtagaag cgcataactt tgatgggcgt
     1921 aagcatttat tacaatatga tgatgttgcc aatgaacagc gtaaagtaat ttacgaacaa
     1981 cgcaatcatc tattagaaac agataatatt gcctcaatga tcgaaagcat tcgccaagat
     2041 gtatttgaaa gcacgattaa ccaatatatt ccgcctcaat ctatcgagga aatgtggaat
     2101 gtgccgggct tagaagagcg tttacgccgt gaatttgggt tggatttacc gatttctcac
     2161 tggcttgaaa ctgaaaaaga cttgcacgaa gagactttgc gtgaacgtat cttaaatatt
     2221 gcgattgcag agtacaatgc gaaggaagaa atagtaggcg cagaggtaat gcgtaatttt
     2281 gaaaaaggtg taatgctaca aaacttagat gagctttgga aagagcatct agcctcaatg
     2341 gattatttac gcaaaggtat tcacttgcgt ggttatgcac aaaaagatcc gaagcaagag
     2401 tataaaaagg aatcttttgc gatgtttacc aatatgcttg ataccttaaa attgaatgta
     2461 attagcattt taagccgtat tcaagtgcgt agcaaagaag aggtggaaga agcgcaacgc
     2521 cagcaagctg aaatggacgc tgcaagtacg ccagttacac aagctaccga ttctgctgct
     2581 ggtagtagag aagaaaatag cgcagagagc ttaagtgaag aagagttggc aaacttaaat
     2641 attggtcgaa atgacccttg cccttgtggt tcgggcaaaa aatataagca ttgccatggt
     2701 aacaaagcga gatattcgta attaacaagc ggtcatattc agtcaggaat ttgcaaattt
     2761 tctgcttaat atgaccgctt gaatttatag aaagagtgaa ggaaactatg tcaaaaccga
     2821 ttattcaagt ctcagcaggg attattcgta acgaatttgg gcaaatttac ttaacccaac
     2881 gtttagaagg gcaagatttt gctcagtctc ttgaatttcc cggggggaaa gtcgatccca
     2941 atgaaacccc tgaagaagca ctaaaacgag aattagaaga agaaattggt attcaagtgt
     3001 taagcgcttt tccgtatgaa aatttttgct ttgaatatcc aacaaaaatc attgaatttt
     3061 tcttttattt ggtggaagag tgggtaaatg aaccttacgg aagagaaggg caagaaggtt
     3121 tttggatcgc acaatcggat ttagatgagg gagctttccc accggcaaat gcccaattaa
     3181 ttaaacgctt aaaagaacac gcataatttg tattgagaac tgtatctaaa gtaa
//
LOCUS       DANMCL010000148         3210 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.153, whole genome shotgun sequence.
ACCESSION   DANMCL010000148 DANMCL010000000
VERSION     DANMCL010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3210
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.153"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(77..781)
                     /locus_tag="PXF40_002614"
     CDS             complement(77..781)
                     /locus_tag="PXF40_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDL5803888.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
     gene            complement(872..1699)
                     /locus_tag="PXF40_002615"
     CDS             complement(872..1699)
                     /locus_tag="PXF40_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL5803889.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
     gene            complement(1776..2567)
                     /locus_tag="PXF40_002616"
     CDS             complement(1776..2567)
                     /locus_tag="PXF40_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL5803890.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            complement(2625..3158)
                     /gene="aadB"
                     /locus_tag="PXF40_002617"
     CDS             complement(2625..3158)
                     /gene="aadB"
                     /locus_tag="PXF40_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL5803891.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
BASE COUNT          736 a          908 c          788 g          778 t
ORIGIN      
        1 agtgccgatt gaccgagctt taacggcact gttgcaaagt tagcgatgag gcagcctttt
       61 gtcttattca aaggccttac atttcaaaaa ctctgcttac caggcgcatt tcgcccaggg
      121 gatcaccata ataaaatgct gaggcctggc ctttgcgtag tgcacgcatc acctcaatac
      181 ctttgatggt ggcgtaagcc gtcttcatgg atttaaatcc cagcgtggcg ttgattatcc
      241 gtttcagttt gccatgatcg cattcaatca cgttgttccg gtacttaatc tgtcggtgtt
      301 caacgtcaga cgggcaccgg ccttcgcgtt tgagcagagc aagcgcgcga ccataggcgg
      361 gcgctttatc cgtgttgatg aatcgtggga tctgccactt cttcacgttg ttgaggattt
      421 tacccagaaa ccggtatgca gctttgctgt tacgacggga ggagagataa aaatcgacag
      481 tgcggccccg gctgtcgacg gcccggtaca gatacgccca gcggccattg accttcacgt
      541 aggtttcatc catgtgccac gggcaaagat cggaagggtt acgccagtac cagcgcagcc
      601 gtttttccat ttcaggcgca taacgctgaa cccagcggta aatcgtggag tgatcgacat
      661 tcactccgcg ttcagccagc atctcctgca gctcacggta actgatgccg tatttgcagt
      721 accagcgtac ggcccacaga atgatgtcac gctgaaaatg ccggcctttg aatgggttca
      781 tgtgcagctc catcagcaaa aggggatgat aagtttatca ccaccgacta tttgcaacag
      841 tgcccgttga agtaaccggc gctgcgcggt tttatcgcgc agcgtccgag ttgactgccg
      901 ggttgggcgg taacgcttca atagagcgaa ggattgcccg cacgattgcc tccctcttga
      961 aaagatcatc cattctgttt ggcgtatcaa tattcagtgc gaagaatacg gagccagtcg
     1021 gccactcaac ccatcctacc caccaaccca tacggccttc ccagcccgtc tttgcacgca
     1081 gtatccagtt gcgaccggct tccacaatca tgagatcctt gaccaagcgc tgatgttcta
     1141 cccgaaaggg cagctcgtta cgatagagct tcctgagaaa tgcaatttgc tcctgcgccg
     1201 agattgcaag gctgccttct atccagtaat cgccattact tgtcgaagga tcggcgttgc
     1261 catagtcgat tttcttcaaa tagcgccgag ctttgtcatc accaatttcc tttgcaaata
     1321 gctcatacac ccaaacagta gaattccgca ttgctgatcg caaatcttgg tcttgattgt
     1381 ggcctgcaaa gcccctgtta acgccgtccc atcgaaaaat ctggaactca tcacgaacag
     1441 cgcctgcatc aagtgcaaaa agtgtatgag gtatcttgaa tgtcgatgca ggcgagtagc
     1501 gtttcttcga tcgcacagga tcaaaaacca acatggcacg atccgcttgg cgttcgtctg
     1561 ccacaactat cgtgcctttg gcttgaaatt cgctgaaaaa cttcctccag tcagaacgtt
     1621 ctagcgtgcc ttcttgcgca tgcgcgaaag tggcaagaga aaaaatggag aaaagtatcg
     1681 cgaagattcg gattgccatt aacttttcct taatgcccaa cggccaaggt aagccgcgcc
     1741 gcgaagcggc gtcggcttga acgaattgtt agacattatt tgccgactac cttggtgatc
     1801 tcgcctttca cgtagtgaac aaattcttcc aactgatctg cgcgcgaggc caagcgatct
     1861 tcttcttgtc caagataagc ctgtctagct tcaagtaaga cgggctgata ctgggcaggt
     1921 aggcgtttta ttgcccagtc ggcagcgaca tccttcggcg cgattttgcc ggttattgcg
     1981 ctgtaccaaa tgcgggacaa cgtaagcact acatttcgct catcgccagc ccagtcgggc
     2041 ggcgagttcc atagcgttaa ggtttcattt agcgcctcaa atagatcctg ttcaggaacc
     2101 ggatcaaaga gttcctccgc cgctggacct accaaggcaa cgctatgttc tcttgctttt
     2161 gtcagcaaga tagccagatc aatgtcgatc atggctggct cgaagatacc cgcaagaatg
     2221 tcattgcgct gccattctcc aaattgcagc tcgcgcttag ccggataacg ccacgggatg
     2281 atgtcgtcat gcacgacaag ggtgacttct atagcgcgga gcgtctcgct ctcgccaggg
     2341 aaagccgaag cctccataag atcattgagc aatgctcgcc gcgtcgtttc atcaagcttt
     2401 acggccacag taaccaacaa atcaatatcg ctgtatggct tcaggccgcc atccactgcg
     2461 gagccgtaca aatgcacggc cagcaacgtt gattccagat ggcgctcaat gacgcttagc
     2521 acctctgata gttggttcga aatttcgatg gtcaccgctt ccctcatgat gtctaacacc
     2581 tgagttaagc cgcgccgcga agcggcgtcg gcttggacga attgttaggc cgcatatcgc
     2641 gacctgaaag cggcacgcaa gacctcaacc ttttccgccc cgagtgaggt gcatgcgagc
     2701 ctgtaggact ctatgtgctt tgtaggccag tccactggtg gtacttcatc ggcatagtaa
     2761 aagtaatccc agatgatcgc ctcccagctg ttacaacgga ctggccgccc ggcgatgacg
     2821 ccctcagccg cctctgggca cgagccctgc ggagcctccg cgatttcata cgcttcgtct
     2881 gcccaccaag caggttcgca gtcaagtaac tcatccccga tctccgctaa gaatccatag
     2941 tccaactcct ccatgacgcg cccgccgagc atttcaacta ttgcctcgag ctcgccgcgc
     3001 ctctcgccgg gaaacgtcag atcaatatca tcgtgcttgc gtgttacacg ccctagccgt
     3061 gcatcgatcg cccagccccc accgatccag agcggcagat ttcgctcatc tgccgcagct
     3121 agaattttgt gtatcaatgt gacctgcgtt gtgtccatgc ggcctaacct ttgttttagg
     3181 gcgactgccc tgctgcgtaa catcgttgct
//
LOCUS       DANMCL010000149         3182 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.154, whole genome shotgun sequence.
ACCESSION   DANMCL010000149 DANMCL010000000
VERSION     DANMCL010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.154"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(52..339)
                     /gene="ybgE"
                     /locus_tag="PXF40_002618"
     CDS             complement(52..339)
                     /gene="ybgE"
                     /locus_tag="PXF40_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HDL5803892.1"
                     /translation="MIHKLYNLTAKGLLKALSFILAAVLFATIWVNSTAFALSFGGKT
                     PYLAMLVFYGMAILWVHGIGFEIRAAIWKVIFLPLLGYLIVIPALWILLVK"
     gene            complement(339..437)
                     /locus_tag="PXF40_002619"
     CDS             complement(339..437)
                     /locus_tag="PXF40_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CydX/CbdX family cytochrome bd oxidase small
                     subunit"
                     /protein_id="HDL5803893.1"
                     /translation="MFYVTWVLGVLLAIFFATVITISIEKTGKFDE"
     gene            complement(452..1585)
                     /gene="cydB"
                     /locus_tag="PXF40_002620"
     CDS             complement(452..1585)
                     /gene="cydB"
                     /locus_tag="PXF40_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HDL5803894.1"
                     /translation="MIDYEILRFIWWILIAVLLIGFAITDGFDMGVLNLLPIIGKSNV
                     ERRIMINTIAPHWDGNQVWLLTAGGAIFAAWPTVYATSFSGFYIAMVLVLAALFFRPV
                     GFEYRAKIDNPKWRSAWDWGLFIGGFVPSLVFGVAFGNLLQGVPFEFNNINQSQYTGS
                     FFGLLNPFALVCGIISLMMLTTQGATWLQMKTTDELHNNSRKVAQVTASIVLVAFILA
                     GVWLYFKDGFVITSELDHNAQSLLTNKTVAVQAGAWFRNYAEMPVLWVVPALVVVGAL
                     LTIIASKANRSGLAFFSSSLMIVGVILTAAVSMFPFIMPSITHPEMSLTVWDATASHT
                     TLTVMLFVAGIFVPLVLAYTIWSYIKMYGRLDASYLEENKAAY"
     gene            complement(1598..3148)
                     /locus_tag="PXF40_002621"
     CDS             complement(1598..3148)
                     /locus_tag="PXF40_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010945563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HDL5803895.1"
                     /translation="MLDVVELSRLQFALTALYHFLFVPLTLGLSFVLVVMETLYVTTG
                     KEVYKDMTKFWGKLFGINFALGVTTGITMEFQFGMNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWERLSKAKHLLATYCVAFGSNFSALWILVANGWMQNPIASEFN
                     FETMRMELSSFSELVLNPVTQSKFLHTVTAGYVCGAIFVLGISSYYILKGRDLGFAKR
                     SFSVGASFGLIAIISVLIMGDESGYEIGKAQPTKLAAMEGEFETQPAPAAWNAFVIPN
                     TAEMKNEFSIHIPYAAGIIATRSLDKEIKGLKDIRVINEQRVRTGMVAYGLLEKLRSG
                     NYTEADKEAFKAVQKDLGFGLLLKQYTPNVVDATEEQIQKAADNTIPNVGPTFWAFRV
                     MMLSGFLMLILITTAFIQNMRGKVESSRFLLRGLLFGLPLPWIAIESGWFLAEYGRQP
                     WAIYEMLPVGVSNSALTTGDLWFTIGLLCGLYTLFLVVEMYLMFKYGRLGPSALKTGR
                     YYFEQSTK"
BASE COUNT         1143 a          654 c          508 g          877 t
ORIGIN      
        1 caaaaatatt ttttatctat caaaaataaa aatagagaca taaaaatgcc tctatttaac
       61 aagtaaaatc cataatgccg gaataacaat aaggtaacct agaagtggta aaaaaatcac
      121 tttccaaata gcagctcgga tttcaaatcc aattccatgt acccataaaa tagccatacc
      181 ataaaatacc aacattgcta aatacggcgt ttttccacca aaagaaagag cgaaagcggt
      241 cgaatttacc caaatagttg caaataatac agccgctaaa ataaaagaaa gggcttttaa
      301 caagcccttt gctgttaagt tatagagttt atgaatcatt actcgtcaaa cttacctgtt
      361 ttttcaatgc tgatcgtgat gactgttgca aagaagattg caagcaatac acctaagacc
      421 caagttacat aaaacatatt gtgtctcctt attagtaagc tgctttattt tcttctaaat
      481 aactagcatc taaacgacca tacattttga tatatgacca aatagtatat gctaatacta
      541 acggtacaaa gataccagca acaaataaca ttacagttaa tgttgtgtgg ctagcagtag
      601 cgtcccaaac cgttaagctc atttctggat gagtaattga cggcataatg aatgggaaca
      661 ttgatactgc agcagttaaa atcaccccaa caatcatcaa tgatgatgag aagaatgcta
      721 aacctgaacg atttgctttt gaggcaataa tagtcagtaa tgcacctact acaactaatg
      781 caggaacaac ccataataca ggcatttcag cataatttct aaaccatgca ccagcttgaa
      841 ccgctacagt tttattcgtc aatagagatt gtgcattatg atctaactcg cttgtgatca
      901 caaaaccatc tttaaaatat aaccatacac ctgcaagaat aaatgccact aatacaatag
      961 aagctgtcac ttgtgccact tttcttgagt tgttatgtag ctcatcagta gttttcattt
     1021 gtaaccaagt tgcaccctgt gtggttaaca tcattaagct gataataccg cacactaatg
     1081 caaatggatt taataaacca aagaatgaac ccgtatattg tgattggtta atattattaa
     1141 attcaaatgg tacaccttgt aataagttac cgaatgcaac accgaatact aatgatggaa
     1201 cgaaaccacc aataaataat ccccaatccc aagcactacg ccatttcgga ttatcaattt
     1261 ttgcacgata ctcaaaacct acagggcgga aaaataatgc tgcaagcaca agcaccattg
     1321 caatatagaa acccgagaac gaagttgcat agactgttgg ccatgcagcg aagatcgcac
     1381 caccagcggt caataaccat acttggttac catcccagtg aggggcaatt gtgttgatca
     1441 taatacgacg ttcaacatta cttttaccaa tgataggtaa aaggtttaat acgcccatat
     1501 caaaaccatc agtaattgca aagccaatta acaataccgc aattaagatc caccaaataa
     1561 agcggagaat ttcataatcg atcatttcta actcctatta tttagttgat tgttcaaaat
     1621 aataacggcc tgtttttaat gcactagggc caagacgacc atatttgaac attaaataca
     1681 tttctacaac taagaatagt gtatataaac cacacaataa gccgattgta aaccataaat
     1741 cacctgttgt taatgcagag tttgacacac cgacaggtaa catttcatag atagcccaag
     1801 gctgacggcc atattcggca aggaaccaac cagattcaat cgcaatccaa ggtaacggaa
     1861 gaccgaataa caagcctctt aataagaaac ggctactttc tactttacca cgcatatttt
     1921 gaataaatgc tgtcgtaatc aagataagca tcaagaagcc agataacatc attacacgga
     1981 atgcccagaa tgtagggcct acatttggaa ttgtattatc tgctgctttt tgaatttgtt
     2041 cttcagtcgc atcaaccaca ttaggtgtat attgttttaa caataaccca aagcctaaat
     2101 ctttttgtac agctttaaat gcttctttat ccgcctctgt ataattgcca gaacgtaatt
     2161 tttctaatag tccgtaggct accataccgg tacgaacacg ttgttcatta attacacgaa
     2221 tatcttttag gcctttaatt tctttatcta aagaacgggt tgcaataata ccagctgcat
     2281 aaggaatatg aattgagaat tcatttttca tttccgcagt atttggaatc acaaaagcat
     2341 tccaagcagc tggagcaggc tgagtttcga attcaccttc cattgcagct aatttagtcg
     2401 gctgagcttt accgatttca taaccagatt catcacccat aatcagtaca gagatgatcg
     2461 caattaaacc aaaacttgca cctactgaga atgaacgttt tgcaaagcct aagtcacgac
     2521 cttttaagat atagtatgaa ctaataccta atacaaaaat agcaccacaa acatagcctg
     2581 cggttacagt atgtaagaat ttagattgtg taactgggtt taatacaagt tcagagaaac
     2641 ttgaaagctc cattcgcatg gtttcaaagt tgaattcaga agcaatcggg ttttgcatcc
     2701 aaccattagc aactaaaatc catagtgcag agaagttaga accaaacgca acacagtaag
     2761 ttgctaataa atgtttcgct ttcgataaac gttcccagcc aaagaagaac aagcccacaa
     2821 aggtagattc taagaagaac gccattaaac cttcaatcgc taatggagcg ccaaaaatat
     2881 cacctacata atgagaataa tatgaccagt tcataccaaa ctggaattcc attgtaatac
     2941 cagttgttac ccctagggca aagttaatac caaataattt accccagaat ttagtcatat
     3001 ctttatatac ttctttaccc gtagttacat acagggtttc catcaccaca aggacgaaag
     3061 aaagacctaa tgtaagcggt acgaataaga agtgatagag tgcagttaga gcaaactgca
     3121 aacgtgagag ttcaactaca tctaacatct caaacctctt atattaatat actaatttga
     3181 ca
//
LOCUS       DANMCL010000150         3173 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.155, whole genome shotgun sequence.
ACCESSION   DANMCL010000150 DANMCL010000000
VERSION     DANMCL010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3173
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.155"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            289..1407
                     /locus_tag="PXF40_002622"
     CDS             289..1407
                     /locus_tag="PXF40_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HDL5803896.1"
                     /translation="MKKTLVALAVTAFAASASATTVYDAEGSKVDFDGSLRIVLDRTN
                     SKELDNHNVVKTKKDAHTGIRNTGSRFGVRVKHDLAQDFYALGRVEFRFNKNTSDDGF
                     GDLYTKRAYVGLGSKQYGELTFGRQVTIADDLSQSVDYNYGINPKGDYIQTDGNQVIR
                     YNYRGVENLHVSANYNFAQDRKDGKVLANKLQNAYGIGALYTVDNWDLRAAYGHTNYK
                     TATDSTKHRKDGVLGSVGYKFGDLKLSVDTGYSREKGLAVTDDNGVTTFYNGVKSNAF
                     YVSPNFEYQVVPASKVYGNYLYERVKSKSNGSTYAAGKEKTHGFLLGVDYQFHKQVVA
                     FVEGSYTRTKDYDKVTNGYEYSGKSTNKAIGVGMRVYW"
     gene            complement(1560..2924)
                     /gene="glmU"
                     /locus_tag="PXF40_002623"
     CDS             complement(1560..2924)
                     /gene="glmU"
                     /locus_tag="PXF40_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012262868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HDL5803897.1"
                     /translation="MTQLSVVILAAGKGTRMYSDLPKVLHPVAGKPMVKHVIDTAKQL
                     DAQQIHLIYGHGADLLKARLSEEPVNWVFQAEQLGTGHAMQQAAPFFADDENIVMLYG
                     DAPLITKATLERLIAAKPENGIALLTVELENPTGYGRIIRENGSVVAIVEQKDANEAQ
                     LKVKEVNTGVMVASGASFKKWLKNLNNNNAQGEYYITDVIAMANQEGFKVQAVQATEF
                     MEVEGANNRLQLAALERFYQKREAEKLLLAGVTIIDPSRFDLRGTVTHGKDVQIDVNV
                     ILEGEIKLGNNVKIGAGCVLKNCEIGDNVEIKPYSVIEDSIVGAKSAIGPFSRLRPGA
                     ELAEETHIGNFVEIKKATIGKGSKVNHLTYVGDAEIGKECNIGAGVITCNYDGANKFK
                     TIIGDNVFVGSDSQLIAPVTIASGSTIGAGATVTKDIAENELVISRVPQRHIQGWQRP
                     TKKK"
BASE COUNT          920 a          561 c          607 g         1085 t
ORIGIN      
        1 atgaaaaatc cttatttatc aatatgttat gcgcttcatt ttttctgtta aaaatgagtg
       61 gattttctcc aaatgaaata atgtaagtat aaccatttga ttttaaaaga aaaaatgccg
      121 tctttgtttt ggggtttgaa ctattgacat tgagttttct ttttgcaatt attctggcga
      181 aaacaatgtt aggcgttttg ctgatacatt gtatcttgga taattactct tacaccttaa
      241 tgagggtaat tacttatcat ataacatata aaatctaagg tgaaaattat gaaaaaaaca
      301 ttagttgcat tagcagtaac cgcgttcgca gcgtcagcat cagcaaccac cgtttacgat
      361 gcagaaggtt caaaagtaga ttttgatggt tctttacgta ttgttcttga tagaacaaat
      421 tctaaagagc tagacaatca taatgttgtt aaaactaaaa aagatgcaca cacaggaatc
      481 cgtaacactg gttcacgttt tggtgtaaga gtaaaacatg atttagctca agatttctat
      541 gcattaggtc gtgttgagtt ccgttttaac aaaaatacca gtgatgatgg ttttggtgat
      601 ttatatacta aacgtgctta tgttggttta ggtagtaagc aatatggtga attaactttt
      661 ggtcgtcaag taacgattgc tgatgattta agtcaatcag tagattacaa ctacggtatt
      721 aatccaaaag gtgattatat tcaaaccgat ggtaaccaag ttattcgtta taactaccgt
      781 ggtgttgaaa acttacatgt aagtgcaaac tataactttg cacaagatcg taaagatggt
      841 aaagtattag caaataaact tcaaaatgca tacggcattg gtgcattata cactgtagat
      901 aactgggatt tacgtgcagc ttatggtcat acaaactaca aaacagctac tgatagcact
      961 aagcaccgta aagatggtgt attaggttct gttggttata aatttggtga cttaaaatta
     1021 agtgttgata caggttattc tcgtgagaag ggtttagctg ttacggatga taatggtgta
     1081 actacattct ataatggtgt taaatcaaac gctttctatg tatctccaaa ctttgaatat
     1141 caagtagtgc ctgcatctaa agtatatggt aactacttat atgagcgtgt gaaatctaaa
     1201 tcaaatggtt ctacatatgc tgctggtaaa gaaaaaactc atggtttctt acttggtgtt
     1261 gattaccaat tccataaaca agtagttgct tttgttgagg gttcttatac tcgtactaaa
     1321 gactatgata aagtaactaa tggttatgaa tactcaggca aatcaactaa caaagctatc
     1381 ggtgttggta tgcgtgtata ctggtaatca attgattttc taaattgata aacccctaac
     1441 aatatttatt gttaggggtt ttgttttaaa tatattgttc attatccttt ttaaagtgta
     1501 tggctttgct gttattggca aagccaattt ttaaatataa taacttttga ccactggcac
     1561 tatttctttt tagtcgggcg ttgccagcct tgaatatggc gttgtggtac acggctaatt
     1621 accagttcat tttccgcaat gtctttagtg actgttgcac cggcaccaat ggttgaaccg
     1681 ctggcaatcg tgaccggggc aatgagttgg ctgtctgagc cgacaaatac gttatcgcca
     1741 ataatggttt tgaatttatt cgcaccatca tagttacaag tgattacacc tgctccgatg
     1801 ttacattctt tgccgatttc cgcatcgcct acataagtga gatgatttac ttttgaacct
     1861 ttgccgatgg tagctttttt gatttccaca aagttaccga tatgggtttc ttccgctaat
     1921 tctgcccccg ggcgtaagcg agagaatgga ccgatagcgg attttgcccc gacaatcgaa
     1981 tcttcaatca cagaataagg tttaatttca acattatcgc caatttcgca gtttttcagt
     2041 acgcagcctg caccaatttt tacattgtta ccgagtttga tttcaccttc tagaatgaca
     2101 ttcacatcga tctgaacatc ttttccgtgg gtgacagtgc cacgaagatc aaaacggctt
     2161 gggtcgataa tagttacacc agccaataac agtttttccg cctcacgttt ttggtagaac
     2221 cgttcaagtg cagcaagttg caaacggttg tttgcccctt ctacttccat aaattcagtt
     2281 gcctgaaccg cttgtacttt aaagccttct tggtttgcca ttgcgatcac atcagtgatg
     2341 taatattcac cttgagcatt gttgttattt aggtttttca accatttttt gaagctcgca
     2401 ccgcttgcta ccatcacgcc ggtattcact tctttgactt taagctgtgc ttcattggca
     2461 tctttttgct caacaatcgc taccacagaa ccattttcac gaataattcg tccgtagcct
     2521 gtcgggtttt ccaattcaac ggttagtaat gcaataccat tttccggttt ggctgcgatt
     2581 aaacgctcta aagtggcttt tgtgattagg ggggcatcac cataaagcat tacaatgttt
     2641 tcatcatcag cgaaaaaagg agctgcttgt tgcattgcat gtcctgtgcc taattgttcg
     2701 gcttggaata cccagtttac aggctcttcg cttaaacgtg cttttaacag atcggcaccg
     2761 tgtccgtaaa ttaaatgaat ttgctgggca tctagctgtt tggcagtatc aataacgtgt
     2821 tttaccatgg gtttaccggc aactgggtgt aacactttgg gtaaatctga atacatacga
     2881 gtgcctttac cggcagctaa aataacaacg ctcagttgag tcatatagaa tccttatttg
     2941 actaaataga tgaaggctta tagtaacgtg taaattgcta taagtgatat ttttgtaata
     3001 ttttaacctt tttataagtg gatttcatcg acaagcaaaa gaaatttgtc tgtttgttat
     3061 ctttttctat tatgtcgatt cttatcttgt ggaaaactgg tataaatagg tagcacttat
     3121 ttgtgctatc tctctacaat agtgtatatc tttgctaaaa tattaaatta att
//
LOCUS       DANMCL010000151         2922 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.156, whole genome shotgun sequence.
ACCESSION   DANMCL010000151 DANMCL010000000
VERSION     DANMCL010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.156"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            47..2086
                     /gene="malQ"
                     /locus_tag="PXF40_002624"
     CDS             47..2086
                     /gene="malQ"
                     /locus_tag="PXF40_002624"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HDL5803898.1"
                     /translation="MSNKQNTAHYFYSPNIKEYASPSAFEKIERLLNTDNDLQKNNQI
                     LPLVKVITQPNAEQQAVEISLNFTNVAKWQIVLENGEVRNGEIKAEQSVLTLPADLPL
                     GYHQLSISTENDEESCSLIVTPPKAFQPKPLEERKKLWGAFLQLYTLRSDNNWGIGDF
                     GDLKQFLANISDYGADFVGLNPIHALFPADPDAASPYSPSFRLWQNIIYIDVSAVEAF
                     QQSEQAQQWFHTKETQQQLAELRAKDFVDYSQVAQLKLKALQFAFEHFSQSSQQQSQT
                     AFDAFIEQAGEPLKIQATFDALHHWISSEFGEKGGWTNWAEEYQSYYSPKVAEFQISQ
                     ATQIRFYMWLQFVANQQLAECNRFAQSLSMPIGFYRDLAVGVTQSGAETWADKALFVQ
                     EASIGAPPDMLAPNGQSWGLSPMHPHILQSRGYQPFIDLVRANMKHCGALRIDHILGF
                     ARMWWVANGESAKEGIYVRYPLEDLLSILALESQRHQCLVIAEALGIVPEGILDSLEQ
                     KGIFAYNVFYFEKAENAFKPLENYPYQAMTTLSTHDLPTIQGYWKGYDFELGEKFDTY
                     PSKAVLRKLKEERSYDRLNIRNAVEKVIALEPNEVGVTIKFTHQLQRYVAHTHSALFG
                     TQPEDWLNMLEPVNIPGTSTEYPNWRRKLSATTEQIFANKDIQQLLKDINEIRKG"
     gene            complement(2154..2885)
                     /locus_tag="PXF40_002625"
     CDS             complement(2154..2885)
                     /locus_tag="PXF40_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HDL5803899.1"
                     /translation="MGCSSFSTKLKQEFFSGWTTFEASWLIVFLAIQIGIFIYQPDTW
                     IATIAAITGILCVVFVGKGKISNYLFGLISVSLYAYISYTFQLYGEMMLNLLVYVPVQ
                     FIGFYFWRKNMTSENTVNNAGVEEVIAKALTAKQWVIVAITTIIGTFLYIELLKYLGS
                     ALAILDGATVVISIVAQILMVLRYREQWALWIIVNIMTISLWTAMYFQNGETSLPLLV
                     MYVMYLCNSIYGYYNWIKLHRKHQQ"
BASE COUNT          937 a          617 c          574 g          794 t
ORIGIN      
        1 cacaagatcg ttattttaac aaatacagta aaggaaaaaa gtcataatgt caaacaaaca
       61 aaatacagct cactattttt actccccaaa tattaaagag tatgccagcc cctctgcttt
      121 tgagaaaata gagcggcttt taaataccga taacgatttg caaaaaaata atcaaattct
      181 accgcttgtt aaagtgatta ctcagccaaa tgccgagcaa caagcggtcg aaatttcgct
      241 gaattttaca aatgtagcaa agtggcaaat tgtgcttgaa aatggtgagg ttcggaacgg
      301 tgaaattaag gcagagcaat cagttctaac cctgcctgcc gatttgcctt taggctatca
      361 tcagctttct atttcaactg aaaatgatga agaatcttgc tcgctgattg taacaccgcc
      421 gaaagctttc cagcctaagc cattggaaga aaggaaaaag ctctggggtg catttttaca
      481 gctttatact ttgcgttccg ataacaactg gggaattggc gattttggcg atctcaaaca
      541 attccttgcc aacatttctg attatggtgc agattttgtg ggcttaaacc ctattcacgc
      601 cctctttccg gcagatcctg atgcggcaag cccttacagc ccgtcctttc gactttggca
      661 aaatattatt tatattgatg tttcagcagt agaagccttt caacaatctg aacaggctca
      721 acaatggttt cacaccaaag aaactcaaca gcaacttgcc gaattgcgag ccaaagattt
      781 tgtcgattac agccaagtag cgcaactgaa attaaaggct ctgcagtttg cttttgagca
      841 tttttcacag tcatctcaac aacaatcgca aacagcgttc gatgccttta ttgagcaagc
      901 aggcgagcca ttaaaaatcc aagcaacgtt cgatgctttg caccactgga tttcatctga
      961 atttggcgaa aaaggcggct ggacaaactg ggcggaggaa tatcaaagtt actattcgcc
     1021 taaagtagct gaatttcaaa tatcgcaggc aacgcagata cgtttttata tgtggttgca
     1081 atttgtggca aaccagcaat tagcagaatg caaccggttt gctcaatcac tttcaatgcc
     1141 gattggtttt taccgcgatt tagccgttgg tgttactcaa agcggagcgg aaacttgggc
     1201 ggataaagcc ctatttgtgc aagaggcgtc aatcggtgca ccacctgata tgcttgcccc
     1261 gaacggacag agctggggac tttcgccaat gcacccgcat attctacaaa gccgaggtta
     1321 tcagccgttt attgatttag tgcgtgctaa tatgaaacat tgtggggcat tgcgaatcga
     1381 ccatattctc ggcttcgccc gtatgtggtg ggtggcgaac ggtgaatcgg caaaagaagg
     1441 gatttatgtc cgttatccgc tcgaagattt gctctctatt ttggcattag aaagccaacg
     1501 tcaccaatgt ttagtgattg cagaggcact tggcattgtg cctgaaggca ttttggactc
     1561 tctcgagcaa aagggcattt ttgcctacaa tgttttttat tttgaaaagg cagaaaacgc
     1621 gtttaaaccg ctggaaaatt atccttacca agcgatgaca actctaagca cccacgattt
     1681 accgactatt caaggctatt ggaaaggcta tgattttgag ctaggcgaaa aatttgacac
     1741 ttacccaagc aaagccgtat tgagaaagct gaaagaagag cgttcgtacg accgcttgaa
     1801 tatccgtaat gcggtggaaa aagtgatagc actcgagcca aatgaagtgg gagtaacaat
     1861 aaaatttacc caccaattac aacgctatgt ggctcacact cacagtgcat tattcggtac
     1921 acagcccgaa gattggctca atatgttaga gccggtgaac attccgggaa ccagcaccga
     1981 ataccctaac tggagaagaa aattatccgc aaccaccgag cagatttttg caaataaaga
     2041 tattcaacaa ctgctaaaag atataaacga aattcgtaaa ggataataac aagcggtcat
     2101 ttttaggtaa atttttacaa aaaatgaccg cttgtaattt gtatttattc gctctattgc
     2161 tgatgttttc tgtgaagttt aatccagttg taataaccgt aaatagagtt acataaatac
     2221 atcacataca tcaccaacag cggcaagctg gtttcgccgt tttggaagta cattgccgtc
     2281 cataaagaaa tggtcataat attcacgata atccacaatg cccattgctc acggtagcga
     2341 agtaccatca aaatttgtgc cacaatcgaa ataaccactg ttgcaccatc taatatagct
     2401 aacgcactgc ctaaatattt aagcaattca atataaagaa atgtgccgat aatggtggta
     2461 atggcgacaa tcacccactg ttttgcggtt aaagctttag caattacctc ttccacacca
     2521 gcattattta ccgtgttttc gctggtcata tttttacgcc agaaatagaa accgataaac
     2581 tgcaccggca catatacaag taaattcagc atcatttcac catataactg aaaggtataa
     2641 gagatataag cataaagcga aacggaaatt aagccgaata gatagttact gatttttcct
     2701 ttaccgacaa ataccacgca taaaatacct gttattgccg caatagttgc aatccaagta
     2761 tcgggttgat aaataaaaat accgatttga atcgctaaaa aaacaatcaa ccaacttgcc
     2821 tcaaaagtag tccaaccact aaaaaactct tgttttaact tagttgaaaa agatgaacag
     2881 cccatatttc ctccatataa agtgaagtat tcttttcaaa tt
//
LOCUS       DANMCL010000152         2889 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.157, whole genome shotgun sequence.
ACCESSION   DANMCL010000152 DANMCL010000000
VERSION     DANMCL010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.157"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..823
                     /locus_tag="PXF40_002626"
     CDS             <1..823
                     /locus_tag="PXF40_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HDL5803900.1"
                     /translation="NQPIVIALAADLGYQTQVETLIKSLCYHHSHLKIYLFQKTFPNE
                     WFDIWCQKLALLSSEIIPVKVCVDFSKYKSLEHINETGFYRYLIPYLDEERVLYLDSD
                     IVVDDNLSEMYWLNFNGIPLYAVEDYVHNHIPAYLDLDLSPYFNSGVLLINNILWKKY
                     SVCDELVTINEKIVNLTYGDQDALNIYFKGGWGALPIEYNYQVDAILELVLRREQEEL
                     ARKNGYLDVIPKIIHYTSKFKPWKKELHTMQISTRKKYWFYYHLEWNDILEQHQK"
     gene            complement(869..1156)
                     /locus_tag="PXF40_002627"
     CDS             complement(869..1156)
                     /locus_tag="PXF40_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcZ/YiiS family protein"
                     /protein_id="HDL5803901.1"
                     /translation="MKNDKPIECEGCNTFDVGSILDNSETVATIQRTYESENEAKAAL
                     EKFTQKARDVESEPCEISSEITPIESGFELVAHFKFSCQAEVVIFQLGTRF"
     gene            1276..1689
                     /locus_tag="PXF40_002628"
     CDS             1276..1689
                     /locus_tag="PXF40_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PACE efflux transporter"
                     /protein_id="HDL5803902.1"
                     /translation="MTAWERVFHALLFECFAIIFTVILTSWLTSHRMVDLTAVIVMIS
                     VIAMVWNVIFNWGFDKVFTGERVQRGLGIRILHSFLFEGGLLVFTIPLVMYMLDIGWW
                     QAFVMDIGMTLFVLVYSVVFNWVYDHLRLRWVKSG"
     gene            1774..2766
                     /gene="mglB"
                     /locus_tag="PXF40_002629"
     CDS             1774..2766
                     /gene="mglB"
                     /locus_tag="PXF40_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HDL5803903.1"
                     /translation="MKRTILSAFALSVICGVNLSYAQSESRVGVTIYKYDDHFMTQMR
                     KDMQNEAKGFAGLKWFMNDAQNSQVKQLAQIETLLQHKMRVLAVNIVNANESKTIVEK
                     AKAYNVPVVFFNRTPSKQALESYEKAYFVSADPKEAGRIQGELIAKVWKSNPDFDLNK
                     DGKLQFVLLKGEPSDVSAERSQAVVESLNQQGVQAEEIYSDTARWRRTLARNKMNEWL
                     VENRAAEIEVVISNNDEMAIGALDALNAHEKRLPIFGIDALPETLALMKKGEIAGTVL
                     NDSSAQAKAVVKLVSNLAQGKPALKDTQWESHSSKTIYLPHIGIDKENLGQFLP"
BASE COUNT          869 a          448 c          635 g          937 t
ORIGIN      
        1 caaccaacca atagttattg cattagcagc tgatttaggc tatcaaactc aagttgaaac
       61 cttaattaaa tcgctttgtt atcatcattc tcatcttaag atttatctat ttcagaaaac
      121 ttttcctaat gaatggtttg atatctggtg ccaaaaatta gccttattat cgagtgaaat
      181 tattcctgtg aaagtctgtg tagatttttc aaaatataag agtttagagc atattaatga
      241 aacgggtttt tatcgttacc ttattccata tctggacgaa gaacgtgtac tatatttaga
      301 ttcagatatt gtggttgatg ataatttatc agaaatgtac tggcttaatt ttaatggtat
      361 acctttatat gcagtagagg attatgttca taatcatata ccggcttatc ttgatttaga
      421 cctcagccct tattttaatt ctggggtact attaattaat aatatacttt ggaagaagta
      481 ttcagtatgt gatgagttgg ttactatcaa tgaaaaaatt gtaaacttaa cttatggcga
      541 tcaagatgct ctcaatattt actttaaagg cggttgggga gcattgccga tagagtataa
      601 ttatcaagtt gatgcaattc ttgaactagt attaagaaga gaacaagagg aacttgcgag
      661 aaaaaatggc tatttagatg tgattccgaa aattatccac tatacgagta aattcaaacc
      721 ttggaaaaaa gaactgcata caatgcaaat atctacgcgt aaaaaatatt ggttttacta
      781 tcatttagag tggaacgata ttttggaaca acatcaaaaa tagctatcat acaaaagctg
      841 attcaagtgt ttgaatcagc tttttgtatt agaaacgtgt tcctaattga aaaataacca
      901 cttctgcttg gcagctaaat ttgaagtgag caaccagttc aaaaccgctt tcaatcgggg
      961 tgatttcact gctgatttca cagggttcag attcgacatc acgggctttt tgagtgaatt
     1021 tttcaagtgc cgctttagct tcattttcgc tttcataagt gcgctgaata gtagcgactg
     1081 tttcgctgtt atctaaaata gaacctacat caaatgtgtt acagccttcg cattcaatcg
     1141 gtttatcgtt tttcattggc taatccttct aaattgatga ataatgtagg tactttaaaa
     1201 ctaaattgcg taacctgcaa tcatcagtga acgattattt gatttagttg gtattttgca
     1261 aagtttggag gaaaaatgac cgcttgggag cgtgtgtttc acgcgctgtt atttgaatgt
     1321 ttcgctatta tttttacggt tatcttaact tcttggctga cttctcatcg tatggttgat
     1381 ttaaccgcag tgattgtgat gatttcggtg attgcaatgg tgtggaatgt tatttttaac
     1441 tggggttttg ataaggtgtt taccggtgag cgagtgcaac gtggtttagg cattcgtatt
     1501 ttgcattcat tcctttttga gggcggtttg ctggttttta ctatcccatt ggtaatgtat
     1561 atgctcgata tcggctggtg gcaggcgttt gtgatggata ttggaatgac cttatttgta
     1621 ttagtttatt cggtagtttt taattgggtg tacgatcatt tacgcctgag gtgggttaaa
     1681 tctggctaaa ttgtgaacta gatcacggtt tccttacaca aaattcgcta tgcttgaatt
     1741 ggttcatatt tggcatagca agagggacat tctatgaagc gtacaatctt gagtgctttt
     1801 gcactttctg ttatttgcgg tgtgaatcta agttacgcac aatctgaaag cagagtgggg
     1861 gtaacgattt acaaatatga tgaccatttt atgactcaaa tgcgtaagga tatgcaaaac
     1921 gaggcgaaag gcttcgctgg gttgaagtgg tttatgaatg atgcacaaaa ttcccaagtg
     1981 aagcaattag cgcaaattga aaccttactt cagcataaaa tgcgtgtgtt ggcggtgaat
     2041 attgtgaatg caaatgagtc gaaaactatt gtggaaaaag cgaaggctta taatgtgccg
     2101 gttgtctttt ttaaccgcac accgagtaaa caagcgttag aaagttacga aaaggcgtac
     2161 tttgtgagcg ctgatcctaa agaggccggt agaatccaag gggaattaat tgcgaaagtg
     2221 tggaaatcaa accccgattt cgatctaaat aaagacggga aattgcaatt tgtattgctt
     2281 aagggcgagc cgagtgatgt gagcgctgag cgttctcaag ctgtggttga atcgcttaat
     2341 caacaaggtg ttcaggcaga agaaatttac agtgacacgg cgagatggcg tagaacattg
     2401 gctcgcaata aaatgaatga gtggctggtg gaaaaccgtg cagctgagat tgaagttgtg
     2461 atttcaaaca atgatgaaat ggcaattggt gctttagatg cgttaaatgc acacgagaaa
     2521 agattgccga tctttggtat tgatgccttg cctgagacgt tagcattaat gaaaaaaggg
     2581 gaaatagccg gcacggtatt aaatgatagc tctgcacaag cgaaagcggt ggtgaaattg
     2641 gtatctaatt tggcacaagg taagcctgcg ctgaaagata cgcagtggga aagccattcc
     2701 tctaaaacga tttatcttcc acatattggt attgataagg aaaatttagg gcaattttta
     2761 ccttaaatgg aggagcgggg cgttataaat acgcccctta ttgatgataa caagcggtca
     2821 tttttcagta aaatcttgca aatcctttct cttttcttcc aacagatttg aatagagcga
     2881 atattcaaa
//
LOCUS       DANMCL010000153         2817 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.158, whole genome shotgun sequence.
ACCESSION   DANMCL010000153 DANMCL010000000
VERSION     DANMCL010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2817
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.158"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1743
                     /locus_tag="PXF40_002630"
     CDS             <1..1743
                     /locus_tag="PXF40_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005687591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer ATPase"
                     /protein_id="HDL5803904.1"
                     /translation="TIVIHPQDKLEAHLEKISSRAVGENFESKYLKEDCQTVQSYLKE
                     GHKLYQAAIAFYVRGKDEKELRTRSRQLRTILLSNNLEPVKENAEIAPLNSYLRWLPM
                     NFNPQMDAKSHYYTKYYFVQHLANLLPIFGRDTGTGNPGITYFNRGGAPFNFDPFNRK
                     DRTKNAHKLLLGPTGSGKSATLCGQLCQAMAVYRPRTFVVEAGNSFGLLADYAERFGL
                     TVNRITLAPNSGIVLPLFSEAHRLLDMELNPEDVPEDIEDNDDTDDEGDMQRDLLAEM
                     ELTARLMITGGEKKEDEKMSRADRAAIRRAILNAARQTKSEGRQTLTEDIKNALEALS
                     HDEHTREERRTRLAEMAESLEMFCTGVNGQFFNREGAIWPEADLTLVDLAMFAREGYE
                     AELAISYISLINHINSLGEKYQHSDRMILNVTDESHIITANPLLAKFLVKGSKMWRKL
                     GIWLWLATQNMDDFPNEAAKLLSMVEWWELLNVSASEIDEINRFRKLSEAQKTMLLSA
                     KKSDRKYTEGVVLATNMEALFRVVPPSLFLALGMTEKHEKAERKQLMMQHGYTELDAA
                     LEVAARIDKARGIH"
     gene            1743..2171
                     /locus_tag="PXF40_002631"
     CDS             1743..2171
                     /locus_tag="PXF40_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803905.1"
                     /translation="MNKQHYRLFNAGPQKSSLGVVSPAVETQLLGFCEQIRQLIGVGK
                     QITLFPHRVVQNHWAIELSGEQGSVHLLLNVTGRSLLPTSNNSEWSARLIIEIADHVD
                     AYWFSAFLTQYLGLKSNLLPLSTSIADNSVYNEVIDNNEV"
     gene            2161..2478
                     /locus_tag="PXF40_002632"
     CDS             2161..2478
                     /locus_tag="PXF40_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012340821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemophilus-specific protein"
                     /protein_id="HDL5803906.1"
                     /translation="MKSDTTKPKMTRVITVLKITLMIIGIILLLLVVGWLAMTYFPST
                     NFQAWFYETRYAWLGWRFVLYVAIWLLMVQLNRKGQMPLKARLMILSVIPIIEGLNLL
                     YLL"
     gene            2489..>2817
                     /locus_tag="PXF40_002633"
     CDS             2489..>2817
                     /locus_tag="PXF40_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5803907.1"
                     /translation="MTFTVDSYLEYFLTLLAWIINNNIFAVLVQTGLFVLPLIFVLIS
                     TWMEVKKQGEDEGNKGDLLITWLSLKFYPAMFVVVLVLAPMIPINLNNIELNVERSKA
                     CGYRVPTA"
BASE COUNT          850 a          530 c          617 g          820 t
ORIGIN      
        1 accatcgtca tccatccaca ggataagttg gaggcacatt tagaaaaaat tagtagtcga
       61 gcggtaggtg aaaattttga gtcgaaatac ctaaaagaag actgtcaaac tgtacagtct
      121 tatcttaaag aggggcataa actctatcaa gcagctattg cattttacgt tcgaggtaag
      181 gatgaaaagg agctacgtac ccgttctcgc cagttgagaa cgattctgct cagtaacaac
      241 ctagaacccg tgaaggaaaa tgcagaaatt gccccactta acagctattt gcgttggcta
      301 ccaatgaatt ttaatccgca gatggatgcc aaatcacatt actacacgaa gtactatttt
      361 gtacaacatt tggcaaactt attacctatc tttggccgag ataccgggac tgggaatccg
      421 gggatcactt actttaatcg aggaggagca ccatttaatt tcgacccatt taaccgtaaa
      481 gacagaacca aaaatgctca caagctatta ttaggtccaa ccggttcggg aaaatcagct
      541 acgttatgtg ggcaattatg tcaggctatg gccgtttatc gcccacggac ttttgttgtt
      601 gaggcaggaa attcatttgg tttattagcg gactatgcag aacgtttcgg actgactgta
      661 aatcgcatta cgttagctcc aaacagcggc attgtcttac cactcttttc agaagcacat
      721 cgtctattgg atatggaatt aaacccggaa gatgtgccgg aagacattga ggataacgat
      781 gacactgatg atgaaggtga tatgcaacga gatttattgg ccgaaatgga gctgacggca
      841 cgtttgatga tcaccggagg tgaaaagaaa gaagatgaaa aaatgagccg tgctgatcgt
      901 gctgctattc gtcgtgccat tttaaatgca gctcgccaaa ccaaatctga aggcagacaa
      961 acgctgactg aagatattaa aaatgctttg gaagcattaa gtcatgatga gcatactcgt
     1021 gaagaacggc gtacccgttt agcagaaatg gcagaatcat tagaaatgtt ttgtaccggt
     1081 gtaaatgggc aattttttaa tcgagagggg gcaatttggc cggaggctga tctaacctta
     1141 gttgatttag ctatgtttgc ccgggaaggc tatgaagcag agttggccat ttcctatatt
     1201 tcactcatta accatatcaa cagtcttggt gaaaaatacc aacacagtga tcggatgatt
     1261 ctgaatgtaa cagatgaatc acacattatc acggccaacc cattattagc taaattccta
     1321 gttaaaggct caaaaatgtg gcgtaaacta gggatttggc tatggcttgc tactcaaaat
     1381 atggatgact tcccgaatga agcggcgaaa ttactctcaa tggtcgaatg gtgggaattg
     1441 ttgaatgtgt ctgccagtga aattgatgaa atcaatcgtt tccggaaact gtcagaggcc
     1501 cagaaaacga tgttgttatc tgccaaaaaa tcagatcgta aatataccga gggcgtggta
     1561 ttagcaacga atatggaagc tctattccga gttgtaccgc ctagcttatt tttagcttta
     1621 ggaatgactg aaaaacatga aaaagcagaa cgtaagcaac tgatgatgca gcacggctat
     1681 accgaactcg atgcagcttt agaggttgca gctcggattg ataaagcaag aggaatacac
     1741 taatgaataa acaacattac cgtttattta atgcaggccc acaaaaatcc tcattaggag
     1801 ttgtatctcc agcggtagaa actcaattgc ttggattttg tgaacaaatt cgccaactca
     1861 tcggcgttgg gaaacagatt accttattcc ctcatcgtgt cgtgcaaaat cactgggcta
     1921 tcgaactttc tggtgagcag ggttctgttc acttattact taatgtgacg gggcgttctt
     1981 tgctaccaac ttccaataac agtgaatggt cagctcgttt aattattgaa atagctgatc
     2041 atgtggatgc ttattggttt tcggcattcc ttactcagta tctcggtttg aaaagtaatc
     2101 ttttaccctt atccacatca attgcggata actctgtgta taacgaggta atagataata
     2161 atgaagtctg atacaacaaa gcctaaaatg acaagggtta ttactgtatt aaaaataacc
     2221 ttgatgatca tcggtattat tttattacta ctcgttgttg gctggttggc aatgacctat
     2281 tttccttcca caaattttca agcgtggttc tatgaaaccc gctatgcctg gttgggatgg
     2341 cgatttgttt tatatgtagc tatttggcta ttgatggtac aacttaatcg aaaagggcaa
     2401 atgccattaa aagccaggtt aatgatttta tctgtcatcc caattattga gggacttaat
     2461 ttactgtatc tactttaagg aggatgagat gacctttacc gtagatagtt acttagaata
     2521 ctttcttacc ttactggctt ggatcatcaa caacaatatt ttcgctgtat tggttcaaac
     2581 agggttgttt gttctgcctc tcatttttgt cttaatcagt acgtggatgg aagtcaaaaa
     2641 acaaggtgag gacgaaggta ataaagggga tttacttatt acttggctca gcctcaaatt
     2701 ttacccggcg atgtttgtcg ttgtattggt cttagctcca atgataccga tcaacctgaa
     2761 taatattgag ttgaatgtag aacgttctaa agcctgtggt tatcgtgttc caactgc
//
LOCUS       DANMCL010000154         2811 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.159, whole genome shotgun sequence.
ACCESSION   DANMCL010000154 DANMCL010000000
VERSION     DANMCL010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2811
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.159"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            482..757
                     /locus_tag="PXF40_002634"
     CDS             482..757
                     /locus_tag="PXF40_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014667974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803908.1"
                     /translation="MAKATVARRIKNAINGNFGDHKSLAGTGGLYEMRIATGAGYRIY
                     YAQQGNVIYILLHGGDKSTQQADIEKAKALWAELKTTGESNGNNTNQ"
     gene            735..1058
                     /locus_tag="PXF40_002635"
     CDS             735..1058
                     /locus_tag="PXF40_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative addiction module antidote protein"
                     /protein_id="HDL5803909.1"
                     /translation="METIQINEQAAEKHGLRPFDVAEFLTDEATIQAYLAEVLKEGDQ
                     DEFLEALNNVARARGMAELAKQTGLGRESLYKTLAKGSKPRFDTIQKILGAFNLVLIP
                     QVKNG"
     gene            1626..1874
                     /locus_tag="PXF40_002636"
     CDS             1626..1874
                     /locus_tag="PXF40_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
                     /protein_id="HDL5803910.1"
                     /translation="MTATKKTLSDTLLKNLKYSPNAKPIADSNGLFILAQKKAKVWIY
                     SYISPKTGKRSTKNRIGSYPQMSLVEQSPQVFEQIARL"
     gene            1926..2513
                     /locus_tag="PXF40_002637"
     CDS             1926..2513
                     /locus_tag="PXF40_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SocA family protein"
                     /protein_id="HDL5803911.1"
                     /translation="MFDELKIAQATAYLLHKAGGTMEHIKVMKLLYLADRLSWQRYGY
                     SISNDEYYSLPYGPVLSNTLNLMRGEEASLYQKTSIWGEWIADKEDHKISLKKSVNTE
                     DEYFFDCLSESDTEILEEVFATFGNYKPFALVEYTHNPKYIPEWEDPQGRSKPISLST
                     LLTKLGKTPSEIESILEQQAEKGTMDNLFKGLGNA"
     gene            2506..>2811
                     /locus_tag="PXF40_002638"
     CDS             2506..>2811
                     /locus_tag="PXF40_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803912.1"
                     /translation="MLEIKRQVTILRPTNYGKEENHYKHLYILLTDPCFDGETGKGDM
                     ILSVNCSSIKDGKALDETCILKAGTHEFITRDSFIFYRHIKIDSLDEIKANIEAGYFI
                     "
BASE COUNT          994 a          514 c          532 g          771 t
ORIGIN      
        1 gaaattgtcc tattttaggg tgtttttgtc ctattttcag gggtttttgt cctatcaaaa
       61 aatgaacagt ttactatttt gtcctagaat tgtcctatat tgtcctatat tgtcctatgc
      121 caataggaca attttagggg cgatgaaccc ttgaaaatcc tagaattgtc ctattgtcct
      181 aattgtccta tacttttttc tatattttat aaaagtgttt tggaaaagtg atttttgata
      241 aaaatccaaa tctacccaaa ttgtaatttt atgctacata atttaaaagc gtgaacaatg
      301 ttcaatgata tgaataattg aaactgctct cttttcaaaa tttaaccact tgattatttg
      361 tatcttaatg gatacactaa gcaataaata gaataagagg ctggcaatga cagagcaaac
      421 cactaatcaa atcatcatta ccgataattt ttcaaaatag cttgagaatt taaagaaccc
      481 tatcgcaaaa gcaacggtag caaggcggat aaaaaatgcg attaatggca actttggcga
      541 tcataaatct ttagccggta caggcggact ttatgaaatg cggatagcaa caggagccgg
      601 atatagaatt tattacgcac aacaaggaaa tgtaatttat atcttgttac acggcggcga
      661 taaatcaaca cagcaagccg atatagagaa agcgaaagca ttatgggctg aattaaaaac
      721 tacaggggaa agcaatggaa acaatacaaa tcaatgaaca ggcagcagaa aagcacggtt
      781 tacgcccttt tgacgtggcg gagtttttaa ccgatgaggc aactattcaa gcctatttag
      841 cggaagtgtt aaaagagggc gaccaagacg aatttttaga agccttgaac aatgtggcaa
      901 gggcaagggg aatggcggag cttgccaagc aaacagggct agggagagag agcctatata
      961 aaaccctagc caaaggcagc aaaccacgct ttgacactat tcaaaaaatt ctaggggcat
     1021 tcaatttagt gcttattcca caagtcaaaa atggctaaaa cttatcactt gctacctgcc
     1081 aaaacctcac attcaaatag ccgttgattg atattaacgg cttttttatt gcttaattct
     1141 gtaccaatta cgcaccgatt gcggatcaat acggggcaag ttttcgcaaa accttaatga
     1201 aatatgaccg cttgtgattt tgtacaaaac gacacaaacc aatgtataaa atcaaaactt
     1261 gccacaaatg gcggaatgat attaaatgcc ccacaaacta gcagtatttc ttaatgactt
     1321 ttcattttaa gggtacattt aagggtatgt ttaacaagtc ttaaatgcac ttctcaataa
     1381 taacaagcct catagcatac aattcaaact cggctgggga ccatttaagc gttgcatatt
     1441 gtctttcact gtctcaaatt tactataaaa tcaagaactt agattatttt atagtctctt
     1501 attgtcttct ttagttgcat tgtatcttag cgtttatgat ccctaaaatg atccctattt
     1561 tgaaaacggg aaaatttagg gatcataaac ttcgataaac ccttatatat caaggattag
     1621 aagaaatgac tgcaactaaa aaaacacttt cagacacatt actaaaaaat cttaaatatt
     1681 ccccaaatgc gaagcctatc gcagacagta acgggctatt tattcttgca cagaaaaaag
     1741 cgaaagtatg gatttatagc tatatcagcc ccaaaacagg caagcgaagc acaaaaaata
     1801 gaatcggtag ctatccgcaa atgagcttag tggaacaatc cccacaggta tttgaacaaa
     1861 tcgcacgtct ttaaaatatt aaattaagag aaagcactat ttgcgatgta gcaggagata
     1921 aaacaatgtt tgatgaatta aaaatagccc aagcgaccgc ctatttgcta cataaggcag
     1981 gcggaacaat ggagcatatt aaggtaatga aattgcttta tcttgcggat cgcttatcgt
     2041 ggcaaagata cggctattct atttctaatg atgaatatta ttcattgcct tatggaccgg
     2101 tattaagcaa cacactcaac ctaatgcgag gagaagaagc gagcttatac caaaaaacca
     2161 gtatttgggg cgagtggata gcagataagg aagatcacaa aatcagcctt aaaaaatccg
     2221 taaataccga agatgaatac ttctttgatt gcctttcaga gagcgacacc gaaattttag
     2281 aagaggtatt tgcgaccttt ggaaattata agccattcgc cctagtggaa tatacccata
     2341 accctaaata cattcccgaa tgggaagacc cacaaggcag aagcaagccg atttctttaa
     2401 gcacgcttct tactaagcta gggaaaacgc caagcgagat cgaaagcatt ttagagcaac
     2461 aggcggaaaa agggacaatg gataaccttt tcaagggctt aggcaatgct tgaaatcaaa
     2521 agacaagtaa cgattcttag accgaccaac tacggcaagg aagagaacca ctacaagcat
     2581 ttatatattc tgcttaccga tccgtgcttt gatggtgaaa ccggtaaagg agatatgatt
     2641 ttaagtgtaa actgctcaag cattaaagac gggaaagcac ttgatgaaac ttgtatttta
     2701 aaggcaggaa cacacgaatt tatcacacgg gacagcttca ttttctaccg ccatataaaa
     2761 attgattcgt tagatgagat taaggcaaat atagaagccg gttattttat t
//
LOCUS       DANMCL010000155         2715 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.160, whole genome shotgun sequence.
ACCESSION   DANMCL010000155 DANMCL010000000
VERSION     DANMCL010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.160"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            293..586
                     /locus_tag="PXF40_002639"
     CDS             293..586
                     /locus_tag="PXF40_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HDL5803913.1"
                     /translation="MFKVIFMALSAIVNYLISDFLIKGVIFLSVYFLTSELLPVVIEM
                     LVSRKLIPDLNALFGQLPESMWYFLNIFQIPMAISLMISAMISRFVRRMPFIG"
     gene            596..1135
                     /locus_tag="PXF40_002640"
     CDS             596..1135
                     /locus_tag="PXF40_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005566788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803914.1"
                     /translation="MAVSAYIGIPGSGKSYEVVKSVILPAVASNRRVVSNIYGLNKEK
                     IHQYLLRKNKKLMIEELGEVIYVTNEQCLESDFLPSMDEQDSFCKAGDLIIIDEVWRI
                     WGNDKDIPKNHRSFIAEHRHFADPITGVTCDLVVINQDISQIPRFIKEGLRQLTECKN
                     TLVWGCVIVIGLMFFKERI"
     gene            1066..1629
                     /locus_tag="PXF40_002641"
     CDS             1066..1629
                     /locus_tag="PXF40_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803915.1"
                     /translation="MQKHVGLGLRNRYRVDVFQGKNLAKKNRTNSYQEKYDKKIFELY
                     KSYESDGAREAVTDSRQSIFSSFWVKVWIILLPLALFYCGYNLYIFLNGSESEVSHNT
                     EQAKFASDENHNDIVIHLLPTIGKPLSTKWRITGELKRDNKSFVILADNENRLRLEPS
                     SQFSFSGRMLQGEIDGGIVSYFSGESK"
     gene            1626..>2715
                     /locus_tag="PXF40_002642"
     CDS             1626..>2715
                     /locus_tag="PXF40_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspD"
                     /protein_id="HDL5803916.1"
                     /translation="MKIHQLGLLLMISSFSYAKNVDFKLEAVPLPKAISIIYDEVLQK
                     PYMLDPKLSNDSRVISFHTTEQQNFEQFIQRYFSNMNISVSEKKGVVYIGHIEPKQPK
                     VIKRSFVYSPIHRDVDYLASFLKDGTEGNQVFASGDKLVYYGTSEDIARVKSILKSID
                     TKSREVVVTGYVFEVQNIEKEGSGINLLAKLLSGKLGISVGYKQSYENFITVNAGNLD
                     AMFELFRTDQRFRVVSSPTLRVKSGSRGNFSVGSDVPVLSNVTYQDGRPIQSIEYRSS
                     GVIFDIQPTIKDKAIDLKIQQLSNFIKTDTGVNNSPTLVKRDLVTDVTVKSGDVIVLG
                     GLAENKISNGETSFSLLPKGWLSGKSNEN"
BASE COUNT          903 a          376 c          544 g          892 t
ORIGIN      
        1 aagtctgatc ttctacacct gatattaatt tgcctgatct ggaagttcct acggcggaat
       61 caattatatc cccttttaaa aaattgctac cagatttaca gaattttgaa ctgaataaac
      121 gaaccgcaca atgccctgtt tggacattta atattgaata cttgagattt cattatgaac
      181 ttagagaaca ttgcgatttg atagaaccac ataaagaaat cttaaagcta ttattcggca
      241 ttatttgggc gtttattgct ttacgttatg tattaagtgc ttaggaggat aaatgtttaa
      301 agtgattttt atggcactat cagcaattgt gaattatttg atttcagatt ttttaattaa
      361 gggtgtcata tttttatctg tctatttttt aacttctgaa ctacttcctg tagtaataga
      421 gatgcttgtg tctagaaaat tgatacctga tttaaatgcg ttatttgggc aattgcctga
      481 aagtatgtgg tattttttaa atatttttca gataccaatg gctatttctt taatgatttc
      541 agcaatgatt tcacgttttg ttagacgtat gccatttatt ggatagagga gtgctatggc
      601 tgtttcagcg tatataggga ttcctggaag cggcaaatcg tatgaagtgg ttaagtcagt
      661 aattttacct gctgttgctt cgaatcgaag agttgtttcc aacatttatg gattaaataa
      721 agagaaaatt catcaatatt tactgcgtaa aaataaaaaa ttaatgattg aagagcttgg
      781 tgaagtcata tatgtaacga atgaacaatg cttggaatcg gattttttac catcaatgga
      841 cgaacaagat tcattttgca aagctgggga cttgataatt attgatgaag tttggcgtat
      901 ttggggaaac gacaaggata ttccaaaaaa tcatcgttca tttattgctg aacatcgaca
      961 ttttgcagat cctataacag gtgtaacttg tgatttagtc gtaataaatc aagatatttc
     1021 tcaaattcca agatttatta aagaaggatt gagacaactt accgaatgca aaaacacgtt
     1081 ggtttggggt tgcgtaatcg ttatcgggtt gatgtttttc aaggaaagaa tttagctaaa
     1141 aagaaccgga caaattctta tcaagaaaaa tatgataaaa aaatatttga gctttataaa
     1201 tcttatgaat ctgatggtgc aagagaagcg gttacagata gtaggcaatc tatattttca
     1261 tctttttggg tcaaggtatg gattattctt ttaccattgg cattatttta ttgtggctat
     1321 aacctttaca ttttcctaaa tggttcagag agtgaagtaa gccataatac tgaacaggct
     1381 aaatttgctt ctgatgaaaa ccataacgat atagtaattc atttacttcc tactattgga
     1441 aaacctttat caactaaatg gcgaataaca ggggaactaa aaagggataa taaatcattt
     1501 gtgatcttag ctgacaatga aaaccgttta agacttgagc ctagtagcca gtttagtttt
     1561 agcggtcgaa tgttgcaagg agagatagat ggtggaatag ttagttattt ttcgggagaa
     1621 tctaaatgaa aatccatcaa ttagggctat tgctcatgat tagctcattt tcttatgcta
     1681 agaatgttga ttttaaatta gaagctgtgc cgttaccgaa agcaatatca ataatatacg
     1741 atgaagtgct acaaaagcca tatatgcttg atcctaaatt atctaatgat tcaagggtta
     1801 ttagctttca tacaacagag caacagaatt ttgagcagtt tattcaacgg tatttcagca
     1861 atatgaatat cagtgtatca gagaaaaaag gtgttgttta tattggacat attgaaccaa
     1921 aacagccgaa agtaataaaa cgtagttttg tgtattcgcc tattcatcgt gatgttgatt
     1981 atttggctag cttcctgaaa gatggaacag aaggaaacca agtttttgca agtggcgaca
     2041 agcttgtata ttatggtact tctgaagata ttgcacgagt gaaaagtatc ttgaaatcaa
     2101 tcgacacaaa aagccgtgaa gtagtggtaa ctggttatgt ttttgaagtg cagaatattg
     2161 aaaaagaggg tagtggcata aacttgttag cgaaattgct atcaggaaaa ttaggcatta
     2221 gtgttggtta caagcaaagt tatgaaaact ttatcaccgt gaatgcagga aatttagatg
     2281 caatgtttga attgtttcgc acagatcagc gttttagggt tgtcagcagt ccgacattaa
     2341 gagtaaaatc aggctcaaga ggtaattttt cagtaggctc tgatgtccct gtattatcga
     2401 atgtaaccta tcaggacgga aggcctattc agtcgattga ataccgttca agcggtgtaa
     2461 tatttgatat tcagccaacg ataaaagata aagcgattga tttaaaaatt caacaactat
     2521 caaatttcat caaaacagat accggtgtaa ataatagccc aacgttggta aagcgtgatc
     2581 tggtaacaga tgttacggtt aaaagcggtg atgttatcgt tttaggtggg ttagctgaaa
     2641 ataaaatatc taatggcgaa accagttttt cattgctacc taaaggttgg ttaagtggaa
     2701 aatcaaatga aaata
//
LOCUS       DANMCL010000156         2697 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.161, whole genome shotgun sequence.
ACCESSION   DANMCL010000156 DANMCL010000000
VERSION     DANMCL010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2697
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.161"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            139..579
                     /locus_tag="PXF40_002643"
     CDS             139..579
                     /locus_tag="PXF40_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HDL5803917.1"
                     /translation="MTACKNGLGFLVLRLFLAYEFFEAGLSKLNGENWFASIQESFPF
                     PFNVLPADLSWAIASGAEILLPILLTLGLFTRFSALGLMILTAVAWYAVHAGNGYNVC
                     NNGYKMALIYLVMLVPLLLQGAGSLSLDFLLQKKSPTKRWLKFL"
     gene            605..892
                     /locus_tag="PXF40_002644"
     CDS             605..892
                     /locus_tag="PXF40_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803918.1"
                     /translation="MKKATLMALAGALTMATATVNAETKSVKADACMEVKDGKCVKTK
                     ATEGKCGEGKCGATSSEPKATEGKCGEGKCGATAPKAAEGKCGEGKCGASK"
     gene            993..1916
                     /locus_tag="PXF40_002645"
     CDS             993..1916
                     /locus_tag="PXF40_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HDL5803919.1"
                     /translation="MLKFTGAGLGYRRDLADGFLSLTDNNIINFMEVAPENWLKMGGQ
                     ARYNFDKVAEKIPVIIHGLSLSLGGQAPLDMTLLKGIKNMQQQYNSFFFSDHLSYCEC
                     EGHLYDLLPMPFTDEAVHHVANRIKQVQDYLGMQISLENTSYYLHSPTSTMNEVEFLN
                     AIAQEADCGIHLDVNNIYVNGVNHGLLDPFVFIDQVDKSRVNYIHIAGHDEDHGAAED
                     VKMTEGESFNMVKGELRHLPTLLVDTHGEAVQKTVWDLLEYTYEHLPHIPPTLLERDF
                     NFPPFQELISEVQHIMSLQKKYAKTRLKNAA"
     gene            1906..2646
                     /locus_tag="PXF40_002646"
     CDS             1906..2646
                     /locus_tag="PXF40_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding domain-containing protein"
                     /protein_id="HDL5803920.1"
                     /translation="MPLKLVEEHKPLLKEIQAEFANAIRHNDVKLMSGNISPQRLGVY
                     SRLVRNNTLGFIDRCYVQLPQHLSPEEWVAVKEKFIREGKAHSPFFQDIAGEFLNFCR
                     ENGCMPPHLLELMDFENAQLLAEVSMATVPSEFEWDNDTIMQFSGAAELRQYAVNFIR
                     SEFKQFDFEPTNVLIWRDTEFGIYYNRLEELDFFLLSSLQEGANSLNGLLAELSEFTE
                     QNLELKALLRQLWEKWVEAEVIYPVYPE"
BASE COUNT          803 a          534 c          581 g          779 t
ORIGIN      
        1 ctataaaaat aggttataat ttttcacaca ttttttgtaa taaacgtata cttattctgt
       61 ctaataatca catttttagt taggagcatt tttatgtcat cattttcgtc atcattttca
      121 actcagtcag cttgctcaat gacagcttgt aaaaacggct tgggctttct tgtattacgt
      181 ctatttcttg cttatgaatt ttttgaagca gggttatcaa aactaaacgg tgaaaattgg
      241 tttgcctcaa ttcaagagag cttcccattc ccctttaacg tactaccagc cgatcttagc
      301 tgggctattg ctagcggagc ggaaatctta ctgcctattt tactcacttt gggtctgttc
      361 acccgcttca gtgcgttagg attaatgatc ttaacagcgg tagcgtggta tgctgttcac
      421 gctggcaatg gctacaatgt ctgcaacaat ggctataaaa tggcactcat ttatttagtg
      481 atgttagtac cacttttatt acaaggtgct ggctcgctct ctctcgattt tctgttacag
      541 aaaaaatccc caaccaaacg ctggttgaaa ttcctttaat cccttaattt atggagaatt
      601 tttaatgaaa aaagcaactt taatggcatt agctggtgca ttaactatgg caaccgcgac
      661 tgtaaacgct gaaactaaat cagtgaaagc agatgcttgt atggaagtaa aagatggcaa
      721 atgtgtaaaa accaaagcta cagaaggtaa atgtggcgaa ggcaaatgtg gagcaacctc
      781 ttctgagcca aaagcaaccg aaggtaaatg cggcgaaggg aaatgtggag caacggcacc
      841 aaaagcggca gaaggtaaat gcggtgaagg caagtgtgga gcttctaagt aagtagcgaa
      901 ggtgcgtttt ctaaacgcac ctaacctctt ataaacacaa tctacaagcg gttaaattcc
      961 gctgattttt tgcaaattaa aggaacaaga cgatgttaaa atttactggt gccggtctag
     1021 gctatcgccg tgacctagcg gacggatttt tatctctcac agataacaat ataattaatt
     1081 ttatggaagt agccccagaa aactggctga aaatgggcgg tcaggctcgg tataacttcg
     1141 ataaagtcgc tgaaaaaatc cctgttatta ttcacggttt atccctctct ctcggcgggc
     1201 aagcgccttt agatatgacg ctactaaaag ggatcaagaa tatgcagcag cagtataact
     1261 cctttttctt ctctgatcat ttaagctatt gcgaatgtga agggcattta tatgacctgc
     1321 tgccaatgcc gtttaccgat gaagccgtac atcacgtggc aaatcgcatt aaacaagtgc
     1381 aagattattt aggtatgcaa atttcccttg aaaatacgtc ctactatctg cattcaccaa
     1441 ccagtacgat gaatgaggta gagtttctca atgcaattgc ccaagaagcg gattgtggca
     1501 ttcaccttga tgtgaataat atttatgtta atggtgtcaa tcacggcttg cttgatccat
     1561 ttgtatttat tgatcaagtg gataaatctc gtgtcaatta tattcatatt gcaggccacg
     1621 atgaagatca cggtgcggcg gaagacgtta aaatgaccga gggtgaatca tttaatatgg
     1681 taaaaggcga actacgtcat ctgccaactt tactggtcga tacacacgga gaagctgtac
     1741 aaaaaactgt gtgggattta ctagagtaca cctatgaaca cctaccgcat attccaccaa
     1801 cactgttaga acgggatttc aacttcccac cgtttcaaga actgattagt gaagtacagc
     1861 acattatgag cttacagaaa aaatatgcaa aaacgaggct aaaaaatgcc gcttaaactc
     1921 gttgaagaac acaaaccgtt actcaaagag attcaagccg agtttgcgaa tgcaattcgc
     1981 cataacgatg taaagctgat gagtggtaat atctctccac agcggcttgg cgtctattct
     2041 cgcttggttc gcaataatac tctcggtttt atcgaccgtt gttatgtaca gctccctcaa
     2101 catctaagtc ctgaagaatg ggttgccgtt aaagaaaaat ttatacgaga aggtaaggct
     2161 cattcgccct ttttccaaga tattgctggc gaatttctca atttttgccg agaaaatggc
     2221 tgtatgccac cacacttgct tgagttgatg gactttgaaa atgctcaatt actggctgag
     2281 gtatcaatgg caaccgtacc atcagaattt gaatgggata acgatactat aatgcagttt
     2341 tctggtgcag ctgagctgcg tcaatatgcg gtaaacttta tccgtagcga gttcaaacag
     2401 tttgactttg agccgaccaa cgtactgatt tggcgagata cggaatttgg catctattac
     2461 aaccgcttgg aagagctgga tttcttcctg cttagctcgt tgcaagaggg ggcaaattcc
     2521 ctgaatggct tactagcaga actcagcgag tttaccgagc aaaatctgga gctaaaagcc
     2581 ttgttacgcc aactttggga aaaatgggtt gaagcagagg tgatttatcc tgtctatcct
     2641 gaatgaggat aaggtatgtg atatgtactg acatacatag taggggcggg tcctgtg
//
LOCUS       DANMCL010000157         2615 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.162, whole genome shotgun sequence.
ACCESSION   DANMCL010000157 DANMCL010000000
VERSION     DANMCL010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.162"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            151..441
                     /locus_tag="PXF40_002647"
     CDS             151..441
                     /locus_tag="PXF40_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000027827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HDL5803921.1"
                     /translation="MALRPLHDKVILKREEVETKSAGGIVLTGSAATKSTRGKVIAVG
                     TGRILDNGSVQPLAVKVGDVVIFNEGYGVKTEKIDGEEVLILAEHDILAIVE"
     gene            510..2150
                     /gene="groL"
                     /locus_tag="PXF40_002648"
     CDS             510..2150
                     /gene="groL"
                     /locus_tag="PXF40_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608625.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HDL5803922.1"
                     /translation="MAAKDVKFGNDARVKMLKGVNILADAVKVTLGPKGRNVVLDRAY
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNE
                     GLKAVAAGMNPMDLKRGIDKAVAAVVEELKAISKPCETSKEIEQVGTISANSDSTVGQ
                     LIAQAMEKVGKEGVITVEDGTGLEDALDVVEGMQFDRGYLSPYFINKPEAGTVELENP
                     YILLVDKKVSNIRELLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIAILTAGTVISEEIGMELEKATLEELGQAKRVVISKDNTTIID
                     GIGDETQIKGRVAQIRQQIEDSTSDYDKEKLQERVAKLAGGVAVIKVGAATEVAMKEK
                     KDRVDDALHATRAAVEEGIVPGGGVALVRAANKVADTLKGDNEEQNVGIKLALRAMEA
                     PLRQIVANAGEEASVVARNVKEGSGNYGYNAGTEQYGDMLEMGILDPTKVTRSALQFA
                     ASIAGLMITTECMITDLPKEEKLDPAAMGGMGGMGGMM"
     gene            complement(2275..2601)
                     /locus_tag="PXF40_002649"
     CDS             complement(2275..2601)
                     /locus_tag="PXF40_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5339 domain-containing protein"
                     /protein_id="HDL5803923.1"
                     /translation="MLKRILGITLCTILVSSNAIASVKTSSLTVAKPTLSKNLPTECE
                     KMFNTANKLVSDAERQPGTHTQVLKMKNKLSLTKQQILKMDSELQQKSCEKGLTALNS
                     LKQKHQ"
BASE COUNT          828 a          428 c          622 g          737 t
ORIGIN      
        1 tatagtttta tcaaaaatgg tcaaatttgt aaaaaatttt acaaatttga ccgcttgcac
       61 ttgaaactct aaaatctgcc tttatattgt taggcgttac gcattttgcg tgaagtttta
      121 tttattcatt tttaagaaaa ggaacatatt atggcacttc gtccattaca cgataaagtt
      181 attttaaaac gtgaagaagt tgaaacaaaa tcggcaggcg gtattgtttt aaccggttcg
      241 gcagcaacaa aatcaacccg tggcaaagta attgcagtag gaacaggtcg cattttagac
      301 aatggttctg ttcagccttt agcagttaaa gtgggcgatg tagtgatttt taacgaaggc
      361 tacggcgtaa aaaccgagaa aattgacggc gaagaagtgc taattttagc agagcacgat
      421 attttggcga ttgtagaata atttcgttct gcacaagcgg ttaaaaaagc aaaatttttt
      481 acatatttca aatacaaagg atttagaaaa tggcagcaaa agacgtgaaa tttggtaacg
      541 atgcacgcgt aaaaatgtta aaaggcgtga atattttagc cgatgcggta aaagtaactt
      601 taggtccgaa aggtcgtaat gtggtgttag atcgtgctta tggtgcacca acgattacaa
      661 aagacggtgt gtcggttgcc cgtgaaatcg aattagaaga taaatttgaa aatatggggg
      721 ctcaaatggt gaaagaggtt gcctctaaag ccaatgatgc cgccggtgac ggtacaacta
      781 ccgcaactgt attagctcaa gcgattgtaa acgagggctt aaaagcagtg gctgcgggta
      841 tgaacccaat ggatttaaaa cgtggtatcg ataaagcggt tgcagcagtg gttgaagagt
      901 taaaagcgat ttcaaaaccg tgcgaaacct caaaagaaat tgagcaagta gggacgattt
      961 ctgcaaactc agattcaaca gtcggtcaat taattgctca agcaatggaa aaagtgggca
     1021 aagagggcgt gattactgtt gaagacggta caggtttaga agatgcatta gacgtggttg
     1081 agggtatgca atttgaccgt ggttacttat cgccatactt tatcaataaa ccggaagccg
     1141 gtacggttga gttagaaaac ccatatattc ttttagtgga taaaaaagtg tctaacattc
     1201 gtgaattatt accggtgtta gaaggtgttg caaaagcagg taaaccgtta ttaattattg
     1261 ccgaagatat tgaaggcgag gcgttagcta ccttagtggt gaacactatg cgtggtatcg
     1321 tgaaagtggc ggcagtgaaa gcacctggct ttggtgatcg ccgtaaagca atgttacaag
     1381 atattgcgat cttaactgca ggtactgtga tttctgaaga gatcggtatg gagcttgaaa
     1441 aagcaaccct tgaagagctt ggtcaagcaa aacgtgtggt tatcagcaaa gataacacca
     1501 caattattga cggtattggt gatgaaactc aaatcaaagg tcgtgtagca caaatccgcc
     1561 aacaaatcga agattcaact tcagattacg acaaagaaaa actacaagag cgtgtagcaa
     1621 aattagccgg tggtgttgcg gtaattaaag taggtgcggc aactgaagtg gctatgaaag
     1681 agaaaaaaga ccgtgttgat gatgctcttc acgcaacccg tgctgcggtg gaagaaggta
     1741 ttgtaccggg gggcggagtt gctttagtgc gtgcagccaa caaagtggct gatacactaa
     1801 aaggcgataa cgaagagcaa aatgtaggta tcaaacttgc cttgcgtgca atggaggctc
     1861 cattacgcca aatcgttgcc aatgcaggtg aagaagcctc agttgtagcc cgcaacgtga
     1921 aagaaggttc aggcaactac ggctataacg caggtacaga gcagtacggc gatatgcttg
     1981 aaatgggaat tttagaccca actaaagtga ctcgttcagc acttcaattc gcggcttcta
     2041 ttgcaggttt aatgatcact acagaatgta tgattaccga tctgccaaaa gaagagaaat
     2101 tagatcctgc cgcaatgggc ggtatggggg gaatgggcgg aatgatgtaa ttgcccattg
     2161 agtgaacaaa agctactgaa attaattcag tagctttttt gttggtaaca agtggttaaa
     2221 tttatgctat tttttgcaaa taaaaaacca agcaagtaag cttggtttta gcgtttattg
     2281 atgtttttgt ttaaggctgt ttagtgctgt taaacctttc tcacaacttt tttgctgtaa
     2341 ttcagaatcc atttttagga tttgttgctt tgttaaagaa agtttatttt tcatttttag
     2401 cacttgagta tgagtaccag gctgtctttc tgcatcagag accaatttat ttgccgtgtt
     2461 aaacattttc tcacattcag ttggcaaatt tttacttaaa gtaggttttg caactgtaag
     2521 tgatgaggtt ttaacacttg ctatagcatt actggaaacc aatatggtac aaagtgttat
     2581 tcctaaaatt ctttttagca tgcgttctcc acaca
//
LOCUS       DANMCL010000158         2571 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.163, whole genome shotgun sequence.
ACCESSION   DANMCL010000158 DANMCL010000000
VERSION     DANMCL010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2571
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.163"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..395)
                     /locus_tag="PXF40_002650"
     CDS             complement(<1..395)
                     /locus_tag="PXF40_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI domain-containing protein"
                     /protein_id="HDL5803924.1"
                     /translation="MRSMFKKFFGKNKSQSAVKSDTIFSIEQDNEGWLYPEKASQLLN
                     TELRQKYLGLLWQQVSMNRQMFEVLYQQPIERYAEMVQLLPASESHHHSHIGGMLDHG
                     LEVIAFSAKVRQSYILPPNVAPEEQSKQR"
     gene            complement(499..963)
                     /locus_tag="PXF40_002651"
     CDS             complement(499..963)
                     /locus_tag="PXF40_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArdC family protein"
                     /protein_id="HDL5803925.1"
                     /translation="MMNTQQPKFDLYQHITDRIIAALEQGTAPWLKPWSHPECNMALP
                     RNAVSNRLYSGINTLLLWIATAEHGYKQCKWITAKKANELGGYIRKGEKATVVMNYRP
                     NEREKLDEEGNIVYDEEGNPEMEQHFFIAKHNLFNLDQCENLPAELYDPVIP"
     gene            1172..1435
                     /locus_tag="PXF40_002652"
     CDS             1172..1435
                     /locus_tag="PXF40_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme-like superfamily protein"
                     /protein_id="HDL5803926.1"
                     /translation="MRPVTRNNRGTSFDPRHNKYINTLATALLARWHIEQFSERNIPV
                     NDENLYMAHNIGLDGFHRALLGQSTRKDIENMRKNGMKPWMSI"
     gene            complement(1519..2544)
                     /locus_tag="PXF40_002653"
     CDS             complement(1519..2544)
                     /locus_tag="PXF40_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
                     /protein_id="HDL5803927.1"
                     /translation="MTAGDTPHDTLKTLVGALKDTREEARKANERGDRFEQEVLRLQA
                     REAEVDSRIAGEVESRVESRLAAAWDGFNRQIEELKGRVQSGNQQQKEAEAIPVGGAS
                     SGFGTESAGQTGNVDNNGIRWVDPDDMVVTDEQGKPVTGNYSGKTKTGFPSPFKAEGE
                     SSNTGTALNNNAGTENMTGNTQIQQIKRTPYYTIPENSTLMGSTAMTALLGRVPIQGA
                     VTDPFPFKVLIGRENLIANGIDLPDVEGAIVSGTSTGDWTLSCVRSEVTSITFVFADG
                     RISNGRASGESRAVKRNQASNLTPFCLTVSLSGFNDIPHSDGNPGFLTMSAVDYVDVY
                     LMSHLAR"
BASE COUNT          706 a          580 c          494 g          791 t
ORIGIN      
        1 tctcgttgct ttgattgttc ttcgggagct acattcgggg gcaaaatata gctttgacga
       61 actttagctg aaaaagcaat aacttctaaa ccgtgatcaa gcattccacc gatatgtgaa
      121 tgatggtgtg attcagaagc tggtaatagt tgaaccatct cagcgtaacg ttctattggc
      181 tgctgataaa gtacctcaaa catttgacgg ttcattgata cctgttgcca aagtagccca
      241 agatattttt gtcgtaattc tgtattaagt aattgagagg ctttttccgg gtataaccac
      301 ccttcattat cttgctcaat agaaaaaata gtatcggatt tgaccgcact ttgagattta
      361 tttttaccaa aaaatttttt gaacattgaa cgcattggaa gagaccgaaa atatgaatgc
      421 tgtattgaat gaaagccgtt tagccctttg cccttttggg taagaccttt ccccttggaa
      481 aggttactct tatccccctt aggggattac aggatcgtac agttccgccg gtaaattttc
      541 acactggtct aaattgaaca gattgtgctt agcaatgaaa aagtgttgtt ccatttccgg
      601 atttccttcc tcgtcataca caatatttcc ctcctcatcg agtttttctc tctcattagg
      661 acggtagttc atcacaacag tagctttttc ccctttacgg atatatccgc cgagttcatt
      721 ggcttttttc gccgtaatcc acttacactg tttgtagccg tgttcagcgg tagcaatcca
      781 aagcaataac gtattgatac cggaatacag acggttagaa accgcattgc gaggtaatgc
      841 catattgcat tccggatggc tccacggttt taaccacgga gctgtacctt gttccaatgc
      901 agcaatgatt ctatcagtaa tatgttggta taaatcaaat ttaggttgtt gagtgttcat
      961 catgtgtttc tccaaagttt gggtaaaaaa atggggaaac acggttaccc tatggggaac
     1021 ttgtttcccc gatgggtagt ttataaaatt tcaatggcca caatttttct agaatcatca
     1081 aagccaacag aactgcctat ggcgtagtaa ttacgaatag tctgttcatc ggcattgatt
     1141 agcagatacc tatcgaggaa gagagattgg gatgagaccg gtaacgagaa ataatcgtgg
     1201 aaccagtttt gaccctcgtc acaataaata catcaataca ttggcaaccg cattattggc
     1261 acgttggcat attgagcaat tctctgagcg taatatccca gtcaatgatg aaaatctcta
     1321 tatggctcac aatattggct tagatggttt ccatcgagcg ttattagggc aatctactcg
     1381 taaagacatt gagaatatgc gtaagaatgg gatgaaacct tggatgtcca tttagctctg
     1441 ttttcaaatg acctaatcca gtttgttccg gagagagtac cgaaattttg cactctttca
     1501 tccgtggtgt atcaaacttc aacgtgctaa atgagacatt aaatatacat caacataatc
     1561 taccgcactc atcgttaaga aaccgggatt cccatcagaa tgaggaatat cgttaaagcc
     1621 cgataaggag acggttaaac aaaatggtgt taaattactt gcttgatttc gtttcacagc
     1681 tctgctttct ccactcgctc gcccattcga aatacgaccg tctgcaaaca caaaggtaat
     1741 gctcgttacc tcagaacgaa cgcaagatag cgtccaatct ccggttgatg taccggatac
     1801 aatcgccccc tcaacatcag gtaaatcaat gccattggca attaaatttt ctcgcccgat
     1861 taatacttta aacggaaacg gatctgtcac agcaccttga ataggtacac ggcctaacaa
     1921 tgccgtcatc gcagtagaac ccattaaagt cgaattttcg ggaatagtgt aataaggtgt
     1981 acgctttatt tgctgtatct gagtattacc agtcatattt tctgtcccag cattattatt
     2041 taatgctgtc ccagtatttg aactttcccc ctctgcttta aaagggcttg gaaagccggt
     2101 ttttgttttc ccggaataat tgcctgtaac cggtttacct tgttcatcgg ttaccaccat
     2161 atcatcagga tcgacccagc gaatgccatt gttatctaca ttccctgttt gtcctgctga
     2221 ttcagtccca aagccagaag aagcccctcc tacagggatt gcctctgctt ctttctgctg
     2281 ctgattacca ctttgaaccc gacctttcag ttcttcgatt tggcgattaa atccatccca
     2341 agcagcagcc aaacggcttt ctacacgact ttctacttca cccgcaatac gagaatccac
     2401 ttcggcttct cttgcttgta agcgtaatac ctcttgctca aagcgatcac cacgctcatt
     2461 tgctttacga gcttcttcac gagtatcttt taatgctcct accaacgttt ttaatgtatc
     2521 gtgaggcgta tctcctgcag taatacctaa tgtattcgcc tcctcatcac t
//
LOCUS       DANMCL010000159         2545 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.164, whole genome shotgun sequence.
ACCESSION   DANMCL010000159 DANMCL010000000
VERSION     DANMCL010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2545)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2545)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2545
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.164"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1642
                     /locus_tag="PXF40_002654"
     CDS             <1..1642
                     /locus_tag="PXF40_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HDL5803928.1"
                     /translation="DLNADTSQAFLNELDQTLWTAADKLRKNLDAANYKHIVLGFIFL
                     KYISDSFTDFQAKLKTQLTTPESELYLDPALFDEQEFSQILAEELEQRDYYAAENIFW
                     VPEQARWDNIKSLSKLNLGDELPWGDKFKGVSRLIDDAFEAIERENPKLKGVLQRIAG
                     FGVPDEMLTGLIDLFSRTNFTQPMHNGEPVHLQAKDILGHVYEYFLGQFALAEGKKGG
                     QYFTPKSIVTLIVEMLEPYSGRIYDPAMGSGGFFVQADRFIQAHAGNRNAISVYGQES
                     NSTTRKLAVMNMAIRGIPFDFGDKPEDTLLNPLHIDKKMDVVMANPPFNQKEWWNESL
                     ANDPRWAYGTPPQGNANFAWLQHMIYHLSPKGKMALLLANGSMSSQTSGEGDIRKNIV
                     QADLVEAMIALPNQLFTNTQIPACIWIINKAKARKGEVLFINATQIGYLKDRVLRDFT
                     ADDIAKISDTYHNWQKQNGYENIPAFCYCATLDEIAKNDFVLTAGRYVGAVQEENDGV
                     PFAEKMQELTALLNEQFKQGRELEQQIAENLKGLGYGI"
     gene            1632..>2545
                     /locus_tag="PXF40_002655"
     CDS             1632..>2545
                     /locus_tag="PXF40_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5803929.1"
                     /translation="MAFNQYVFSDIVELISEKIKIKDLKKENYISTDNMLPNFGGITL
                     AENLPNSASCNRFAKKDILFSNIRTYFKKVWLAEFSGGCSPDVLVMRSKNTDILLNEY
                     LFLLIRSDDFINFTVISANGAKMPRGDKNAMKGFIFNIPSIEYQKKCIANYFAFDQKI
                     QLNTQTNQTLEAIAQAIFKSWFVDFDPVRAKAAALSEGKSEHEANLAAMSVICGKDTS
                     ELNDTEYKALWQIAEAFPSEFGDEGLPIGWKFNQADNLFDVGIGKTPPRKESEWFSDN
                     ANDTEWISIKDMGNQGLFITESSEYLKA"
BASE COUNT          804 a          593 c          525 g          623 t
ORIGIN      
        1 tgatctcaac gctgacacaa gtcaagcctt tttaaacgaa ctcgaccaaa ccctctggac
       61 tgccgccgac aaactgcgta aaaacctcga tgccgccaac tacaaacaca tcgttcttgg
      121 ctttatcttc ctaaaataca tctccgacag ctttaccgat ttccaagcca agctaaaaac
      181 ccagcttacc acccccgaaa gcgaactcta tcttgaccct gcactatttg acgaacaaga
      241 atttagccaa attcttgccg aagagttgga acagagagat tactacgccg ctgaaaacat
      301 cttttgggtg ccggagcaag cccgctggga caacatcaaa tcattaagca aactcaatct
      361 tggcgatgaa ttgccttggg gagacaaatt taaaggtgtc agccgcttga ttgatgatgc
      421 ctttgaagcc atcgaacggg aaaaccccaa actcaaaggc gtactccaac gcattgccgg
      481 ctttggcgtg cctgatgaaa tgctcacagg cttaattgac ctgttctcac gcaccaattt
      541 cacccagcct atgcacaatg gcgaacctgt gcatctgcaa gccaaagaca ttttagggca
      601 cgtctatgaa tactttcttg ggcaatttgc ccttgccgaa ggcaaaaaag gcggtcaata
      661 cttcacgcca aaatccatcg ttaccctgat tgttgaaatg ctcgaaccct attcagggcg
      721 gatttacgac ccagctatgg gcagcggcgg cttttttgtg caagctgacc gctttattca
      781 ggctcacgca ggcaaccgca acgccatttc cgtttatggg caagaatcca actccaccac
      841 tcgcaaactg gcggtgatga atatggcgat tcgtggtatt ccctttgact ttggcgacaa
      901 gcccgaagat accctactaa accctttgca catcgacaaa aaaatggatg ttgtgatggc
      961 aaatccgccc tttaaccaaa aagagtggtg gaatgaaagc ctagcaaacg atccacgctg
     1021 ggcatacggc acaccgccgc aaggcaacgc caactttgcg tggttgcaac atatgattta
     1081 ccacctctcc cccaaaggca aaatggcact cctgctcgcc aacggctcaa tgagcagcca
     1141 aacttcaggc gaaggcgaca ttcgcaaaaa catcgtgcaa gctgaccttg tcgaagcgat
     1201 gattgccctg cccaatcagc tattcaccaa cacccaaatc cctgcctgca tttggattat
     1261 caataaagcc aaagccagaa aaggtgaagt gctgtttatc aacgccaccc aaataggcta
     1321 cctgaaggac cgcgtcttgc gtgattttac cgctgatgac atcgccaaaa tcagcgacac
     1381 ctaccacaac tggcaaaaac agaacggcta cgaaaatatc cctgcgtttt gttattgtgc
     1441 cacgctggac gaaatcgcca aaaacgattt tgtgctgacc gcagggcgat atgtcggtgc
     1501 ggtacaagaa gaaaatgacg gcgtgccgtt tgcagaaaaa atgcaggaat tgaccgcttt
     1561 attgaatgaa caatttaaac aagggcggga attggaacag caaatcgcag agaatttaaa
     1621 ggggttggga tatggcattt aatcagtatg tattttcaga tattgttgaa ttaatatccg
     1681 aaaaaataaa aatcaaagac ttaaaaaaag aaaactatat ttcgacagat aatatgctgc
     1741 ctaattttgg tggaataaca cttgctgaaa accttccaaa ttcagcttct tgcaataggt
     1801 ttgccaaaaa agacattttg ttttccaata taagaaccta ctttaaaaaa gtttggcttg
     1861 ctgaattttc aggtggttgt tctcctgatg ttctggtaat gcgcagtaaa aacacagata
     1921 ttttattaaa tgagtattta tttttactta tccgttctga tgattttatt aactttacag
     1981 ttatatcagc aaatggagca aaaatgccac gaggggataa aaatgcaatg aaaggtttta
     2041 ttttcaatat cccaagtatt gaatatcaaa aaaaatgtat tgctaattat tttgcctttg
     2101 accaaaaaat ccaactcaac acccaaacca accaaaccct agaagccatt gcacaggcaa
     2161 tcttcaaaag ctggtttgtg gattttgacc ctgtgcgcgc caaagccgcc gccctaagcg
     2221 aaggcaaaag cgaacacgaa gccaaccttg cggcaatgtc ggtgatttgt ggtaaagaca
     2281 ccagcgagtt aaacgacacc gaatacaaag cgctttggca aatcgccgaa gccttcccaa
     2341 gtgagtttgg agatgaaggg ttacctattg gctggaaatt caatcaagca gacaatttat
     2401 ttgatgttgg tattgggaaa accccaccaa gaaaagagag tgaatggttt tctgataatg
     2461 caaatgatac agaatggatt tctattaaag atatgggaaa tcagggatta tttatcacag
     2521 aaagtagcga atatctaaaa gctga
//
LOCUS       DANMCL010000160         2531 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.165, whole genome shotgun sequence.
ACCESSION   DANMCL010000160 DANMCL010000000
VERSION     DANMCL010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.165"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(76..234)
                     /locus_tag="PXF40_002656"
     CDS             complement(76..234)
                     /locus_tag="PXF40_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803930.1"
                     /translation="MDTTQKRVALDTILQCLHFAEEKGAIPPIPEDWRYEMTGRSMGI
                     EQIPNQKL"
     gene            complement(238..414)
                     /locus_tag="PXF40_002657"
     CDS             complement(238..414)
                     /locus_tag="PXF40_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803931.1"
                     /translation="MAYVRIYQGEAYGWCAEKGEANTECPEALLVSLTGDIFEAVGGD
                     KLKGAKKWQPYKKE"
     gene            428..685
                     /locus_tag="PXF40_002658"
     CDS             428..685
                     /locus_tag="PXF40_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803932.1"
                     /translation="MICHADPEYVKYNYAGLWEKGSDGTFFYNYQQFMPEVEAKESLR
                     EQEPELDDGYNEEEYSEEEYSDENDASDENDNYDETYDDNF"
     gene            823..978
                     /locus_tag="PXF40_002659"
     CDS             823..978
                     /locus_tag="PXF40_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803933.1"
                     /translation="MLFKEKGYDEFLTQKIAKGRAELESGKGIPLEQATLLVQSTIEE
                     TAQELDD"
     gene            1032..1190
                     /locus_tag="PXF40_002660"
     CDS             1032..1190
                     /locus_tag="PXF40_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803934.1"
                     /translation="MTEEYQNFLIEQVKQGLDDIENGRVISLEESRQLCQKTIYETLQ
                     ELQGAVYA"
     gene            1183..1500
                     /locus_tag="PXF40_002661"
     CDS             1183..1500
                     /locus_tag="PXF40_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5803935.1"
                     /translation="MLSRKEVLMTRRASMNLQQIIRNVVEYTYSYESGDKLSAEIHNT
                     LDNLSYFPRIGVIGSVENTRECFCRGYRIIYRETENQVQILAIIHCRQQYPTDYYRSA
                     FKA"
     gene            1621..1851
                     /locus_tag="PXF40_002662"
     CDS             1621..1851
                     /locus_tag="PXF40_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803936.1"
                     /translation="MSLLKKAQTFISIFNEVRAKNEAQRQSSNNLNVALKNAAEMRAE
                     MNGFSLKPQKRSTYFADHYGCGIHAVETYDNE"
     gene            complement(1902..2039)
                     /locus_tag="PXF40_002663"
     CDS             complement(1902..2039)
                     /locus_tag="PXF40_002663"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803937.1"
                     /translation="MFYSNNPLIKHKTGLLNLAEELGNISQAVVVVRMFSNLRKNPQI
                     K"
     gene            complement(2119..>2531)
                     /locus_tag="PXF40_002664"
     CDS             complement(2119..>2531)
                     /locus_tag="PXF40_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803938.1"
                     /translation="MHLCGIKYTDGASEFFNAAISNNLDLAKMNVKSDGTTFLKLSLL
                     NSVSFLLTPEMCLTEGGIYLNIRFDKSLKTKKQIFALTLINQNHVFIPNSLLNLKKMN
                     DFPNGERVVSIKSIGLLTNEEIVFYGGCRRSDLI"
BASE COUNT          866 a          471 c          425 g          769 t
ORIGIN      
        1 ttcataataa aaaagtatgg ttagctaaaa tttagccaca ccatactttc ttttgtgtat
       61 tttgtaaatg cccagctata atttctgatt tggaatctgc tcaatcccca tactacgccc
      121 cgtcatttca taccgccaat cttcaggtat aggcggtata gctcccttct cttcagcaaa
      181 atgcagacac tgcaatatag tatctaaagc cacacgtttt tgtgtcgtat ccatctgtca
      241 ttctttcttg taaggctgcc attttttggc acctttcagc ttatctccgc cgactgcttc
      301 aaaaatatcg ccggttaaac tcaccaataa ggcctcaggg cattctgtat ttgcctctcc
      361 tttttcagca caccaaccat aagcctcacc ttggtaaata cgaacatatg ccacccctca
      421 attagggatg atatgccacg ctgatcctga atatgtaaaa tacaactacg ccggactttg
      481 ggaaaaaggc agcgatggca cttttttcta caattaccag caatttatgc ctgaagttga
      541 agctaaagaa tcactaaggg aacaagaacc tgaacttgat gatggatata acgaagagga
      601 atatagcgaa gaagaatatt ccgatgaaaa tgatgccagc gatgaaaacg ataactacga
      661 tgaaacttat gatgataatt tttaaatatt cccaaaccac acttccaaaa accctgctct
      721 tgacactcta ttgctttaag cgtaaattat tccaatattt cgcatttagg agaacataat
      781 ccctatgcct gaaagccttg taataagtga aaggaacata aaatgctatt taaagaaaaa
      841 ggctacgatg agttccttac tcaaaaaatt gcaaaaggca gagctgaatt agaatccgga
      901 aaaggtattc ctcttgagca agccacattg ttagttcaat caactattga agaaactgct
      961 caagaactgg acgattaaca atttgtaaca ttgctaatat atctatatac aactaatgat
     1021 aggagttatc catgacagaa gaataccaaa acttcttaat agagcaagta aaacaaggac
     1081 ttgatgatat agaaaacgga cgtgttattt cattagaaga aagccgtcaa ctgtgtcaaa
     1141 aaaccatata tgaaaccttg caagagctac agggagccgt gtatgcttag tcgaaaagag
     1201 gtgttaatga ctcgcagagc aagtatgaat ttacaacaaa tcattcgtaa tgttgtggaa
     1261 tatacttata gctatgaaag tggtgataaa ttatctgcgg aaattcataa cactttggat
     1321 aatctttctt attttccacg aattggtgtt ataggttcag tagaaaatac tagagaatgc
     1381 ttttgccgag gttatagaat tatatatcga gaaacagaaa atcaagtgca aattttagcc
     1441 attatccatt gtcgtcaaca atacccaacc gactattatc gctctgcatt caaagcataa
     1501 caggagctat aaaatggaaa taaaaagaaa aatgaccgta gccgaattaa aactcaaggc
     1561 aatgctcgcc aagcctacca tagttcaata atattaggtg caaaaaacag gagaaccaca
     1621 atgtctctac ttaaaaaagc acaaacgttt atctctattt ttaatgaagt gcgagctaaa
     1681 aatgaagctc aacgccagtc ttcaaacaat ttaaatgttg ccttgaaaaa tgctgctgaa
     1741 atgagagctg agatgaatgg gttctccctt aagcctcaaa agcgttctac ttactttgct
     1801 gaccattatg gttgtggtat tcatgcagta gaaacctatg ataatgaata aatagcggta
     1861 actatgtcac cgctattttt tatattttcc taattatcta gctactttat ctgtggattt
     1921 ttgcgtagat tgctgaacat tcttactacc accactgctt gagagatatt gcccagttct
     1981 tctgctaaat ttaataaacc ggtcttgtgt ttaatgagag ggttgttaga ataaaacatg
     2041 agagtttcct tttttgttta gattgaattt ggacactcat attctaaacg ggaaactctc
     2101 actttttaga gtgaattgtc agatcaagtc tgatcttcta cagccaccat aaaaaacaat
     2161 ctcttcattg gttaacaaac caatagattt tatgctaaca actctttccc catttggaaa
     2221 atcattcatc ttctttaaat taagtagtga attgggaatg aaaacatgat tttggttaat
     2281 taaggttaat gcaaaaattt gctttttagt tttaagagat ttatcaaaac gtatatttaa
     2341 atagatgcca ccttctgtta gacacatttc aggagtaagt aaaaaactaa cagaatttaa
     2401 taaagatagt ttcagaaacg ttgttccatc acttttaaca ttcattttag caagatctag
     2461 attattagat attgccgcat tgaaaaattc agatgctcca tcagtgtatt ttattccaca
     2521 taaatgcatg a
//
LOCUS       DANMCL010000161         2512 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.166, whole genome shotgun sequence.
ACCESSION   DANMCL010000161 DANMCL010000000
VERSION     DANMCL010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2512
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.166"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            32..751
                     /locus_tag="PXF40_002665"
                     /pseudo
     CDS             32..751
                     /locus_tag="PXF40_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616566.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
     gene            811..1260
                     /locus_tag="PXF40_002666"
     CDS             811..1260
                     /locus_tag="PXF40_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudoazurin"
                     /protein_id="HDL5803939.1"
                     /translation="MLAKLKWNQLACVTLAFCSASVFSAHHEIKMLDNNAEGSMVFEP
                     GYVKAEVGDTVTFIPSHKGHWVESRSIPEGAEKFLSKEDEEFTITLTHEGVYVYYCPP
                     HRTMNMAGIIQVGQALNLEATQKEVEKIEKRTKENKGRLFEYLEQVK"
     gene            1361..1882
                     /locus_tag="PXF40_002667"
     CDS             1361..1882
                     /locus_tag="PXF40_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type II secretory pathway, pseudopilin PulG"
                     /protein_id="HDL5803940.1"
                     /translation="MYKAITLIEILTTITIMVIAVYFISPVIFTLQDRIALHSEIENI
                     QSFIQQIQTKARYTKRNYTLTLSQRNNQWCMIAVIKPINTSKQIICDCLNKHFCDLGK
                     EYHLYTPTHQQIVLKNKSLYPKSFINVDGVSGQLESKCIKLSLNKENEILQFEQLGRV
                     YVAAKNKRSTCKD"
     gene            1914..>2512
                     /locus_tag="PXF40_002668"
     CDS             1914..>2512
                     /locus_tag="PXF40_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803941.1"
                     /translation="MASALGAFLLLLVASSYADFYYTQTKQKEQLYLQAEAHQLLNYF
                     QQHFQHIGYQGSHRTDSNFDLFQQAGKSLNIVHKNCIIGFYDLNQDGCLGKRKTKTAA
                     CKLGTVNNTREVLKEIVGFKVENNEIYTFSSQLDNCVKEQCQTLLENCDGNWSKFTEA
                     NNFKTKKLDFSWRQEDNLLKIELEIESPKQKGLIYTAVR"
BASE COUNT          871 a          409 c          498 g          734 t
ORIGIN      
        1 gttttagtcg ttatctagga cagcccctac ttttaatact cgtaagcccc cttttgataa
       61 ccctaaagtt cgtcaagcat tgaattatgc ggtgaataaa actgaaattt taacttccgt
      121 ttaccaaggc tctgcaacgc cagctaaaaa cccaatgcct tctacgattt ggggatataa
      181 caacgaagta gccggttatg aatttaatcc ggaaaaggcg aagagcttgc ttaaagaggc
      241 cggattagaa aatggctttg aaacagaaat ttgggcaatg cctgtttctc gcccttacaa
      301 tccaaatgcc cgtagaatgg ctgaaatgat tcaagaggat tggaaagcaa taggggtaga
      361 ggcaaagata gtgagctatg aatggggaga atatcttaaa cgaatgggaa acggcgagca
      421 cgctaccgga atgattggtt ggaccggaga taacggcgat ccagataatt tcctcaatgc
      481 cctactcagt tgtaatgcgg tagaacaagg ctcaaactat gcagggtttt gtaatccaga
      541 gtttgaccgt ttaattaatg aggctgcgac tatcagtgat caaaacaagc ggtcagattt
      601 atataaaaaa gcgcaattca tctttaatga gcaagcacct tggttaccga ttgcacattc
      661 aacggtgtat tttccggtaa ggaaagaggt aaaaggctat gttgtcagcc cgtttattgc
      721 tcataatttt tatggtgttg agctggaata acctaaggta taatgaattg aactcatttt
      781 gtgcctcata aatttaggag caataaatat atgttagcga aacttaagtg gaatcaatta
      841 gcttgtgtaa cattggcatt ttgttcagcc tcagtatttt cagcccatca cgaaatcaaa
      901 atgttagata acaatgcgga aggatcaatg gtatttgagc ccggttatgt aaaagcagag
      961 gtgggcgata cggtaacatt tattccgtct cataaagggc attgggttga aagccgctcg
     1021 attccggaag gtgcggagaa gttcttatct aaagaagatg aggaatttac tattaccctt
     1081 actcacgaag gtgtttatgt ttactactgt ccgccacacc gaaccatgaa tatggccgga
     1141 attatccaag taggacaagc tctcaatctt gaagccacac aaaaagaagt ggaaaaaatt
     1201 gaaaaacgca cgaaagaaaa taaaggacgt ttatttgaat atttagagca agttaagtag
     1261 aagtgattta attttgcgat ctgcatcgaa aaatcaatat ttaatagttt acaaatgatg
     1321 cttaaattct aagataccct ctatcaatga gggtattttt atgtataaag ccatcacatt
     1381 aattgaaata ctaaccacta tcactattat ggtgatcgct gtttatttta tctcgccggt
     1441 tatttttaca ctgcaagatc gaattgcact tcatagtgaa attgaaaata tccaatcttt
     1501 tattcagcaa atccaaacta aagcacgtta taccaaacgt aattatacct taaccctttc
     1561 tcagcggaat aatcagtggt gtatgattgc ggtaattaag ccaatcaata ctagcaaaca
     1621 aattatttgt gattgtttga ataaacattt ttgtgattta ggaaaagaat atcatcttta
     1681 tacgccgact catcagcaga ttgtattaaa aaataaaagt ttatatccga aatcctttat
     1741 taatgttgat ggggtaagtg gtcaattaga atcaaaatgt attaagctca gtttaaataa
     1801 agaaaatgaa attttgcaat ttgaacaatt aggacgggtt tatgtggcag caaaaaataa
     1861 acgtagcacc tgcaaagatt agtttatctg cttttagcct aattgaagta ttaatggcta
     1921 gtgcattagg ggcgttttta ttattgcttg ttgcttcaag ttatgccgat ttctattaca
     1981 cacaaaccaa acaaaaagaa cagctctact tgcaagcaga agctcaccag ttactaaact
     2041 acttccaaca gcattttcaa cacattggct atcaaggctc tcacagaaca gacagtaatt
     2101 ttgatttatt tcagcaagca gggaaaagcc tgaatattgt gcataaaaat tgcattattg
     2161 gattttacga tttaaaccaa gatggctgtt tgggaaaacg taagacaaaa acggccgctt
     2221 gtaagttagg aacagtgaat aataccagag aggtgttaaa agaaattgtt ggctttaaag
     2281 tagaaaataa tgaaatttat actttttcat cgcaattaga taattgtgtg aaagaacaat
     2341 gccaaacatt attggaaaat tgcgatggaa attggagtaa atttaccgaa gcaaataatt
     2401 tcaaaactaa gaaactggat tttagttgga gacaggaaga taacttatta aaaattgagt
     2461 tagaaataga atcacctaaa caaaaaggat tgatttatac ggcagtacgt ta
//
LOCUS       DANMCL010000162         2415 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.167, whole genome shotgun sequence.
ACCESSION   DANMCL010000162 DANMCL010000000
VERSION     DANMCL010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2415
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.167"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..293
                     /locus_tag="PXF40_002669"
     CDS             <1..293
                     /locus_tag="PXF40_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803942.1"
                     /translation="GTIAARNMAANSINASHIVGSSITADKLNVNNLAAISANLGAIT
                     AGSININNRFKVSNAGVVEMRANSGNVGMVMNNNSIIVYDEQGRVRVKMGKL"
     gene            293..736
                     /locus_tag="PXF40_002670"
     CDS             293..736
                     /locus_tag="PXF40_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005620879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803943.1"
                     /translation="MLIGILCIIALAVLGLLFYFHKKKRKKVNKGVNMAEYGIQTFDT
                     ANVSTFSTNERLFKYIGTKNIKYGKFSFTVTEKYEGQLVFIISMLHSVHRKQATGYKT
                     NIPNLIHLENVSINDKTISGEVVCIFPFSLPADDSDYIQIVYGAY"
     gene            737..1336
                     /locus_tag="PXF40_002671"
     CDS             737..1336
                     /locus_tag="PXF40_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803944.1"
                     /translation="MSYGLSTFNINENFRSLSLQRKGRANFSNKIATIQAASDEIIVI
                     KYSDGQVCLLYRENGIATLATENATFAEYLIFSTNVPKSGGYGIEVYNSAGNVVFSSN
                     HKFLRPIEYVDLNPSKNVFRFTGQANRQYGIILSNFGFDFVINYDNGYSTSRSAKVSG
                     NFIEFGFCKYHYSGLYKTGMSYNSKAMYFNALVVDITGY"
     gene            1451..1744
                     /locus_tag="PXF40_002672"
     CDS             1451..1744
                     /locus_tag="PXF40_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803945.1"
                     /translation="MTTFNKILNPMYSTIASYSTQDDGSLNAKYVVGTGDDTDGEVTN
                     FVIITSEYKYIDAQSAKAITDAPLTKEDIGKTPTQIMLGRIYKHLKETGQIVV"
     gene            1905..2144
                     /locus_tag="PXF40_002673"
                     /pseudo
     CDS             1905..2144
                     /locus_tag="PXF40_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          833 a          388 c          461 g          733 t
ORIGIN      
        1 ccggcacgat tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtag
       61 ggagttcgat cactgcggat aagctaaatg taaacaattt agcggcaata tcagcgaatc
      121 tcggagctat tacagctggt tctattaata tcaataatag attcaaggta agtaatgctg
      181 gagtagtcga aatgcgagcc aatagtggaa atgttggtat ggtaatgaat aacaatagta
      241 ttattgttta tgatgaacaa ggtagggtta gagtaaaaat ggggaaatta tgattctaat
      301 aggtatttta tgtattattg cattagcagt cttagggctg cttttttatt tccataaaaa
      361 aaaacgaaaa aaagtaaata aaggggtaaa tatggctgaa tatggtattc aaacttttga
      421 taccgctaat gtctctacat ttagtaccaa tgagcgatta tttaaataca ttggaactaa
      481 aaatattaag tatggtaaat tttcattcac ggtaacagaa aagtatgaag gacaacttgt
      541 atttatcatt agtatgttac attcagttca ccgaaaacaa gcaacaggtt ataaaacgaa
      601 tattcccaat cttattcatt tagaaaatgt ttcgatcaac gataaaacga tttcaggaga
      661 agttgtttgt atttttcctt ttagtctacc ggctgatgat tcagattata ttcagattgt
      721 atatggagca tattaaatga gttacggact atctactttt aacatcaatg aaaatttcag
      781 aagtttatcc ttacaaagaa aaggacgagc taacttttct aataaaattg caactattca
      841 ggcagcgtca gatgaaatta ttgtcattaa atattctgat gggcaagtat gtttgctata
      901 tcgagaaaat ggtattgcca cattagctac agaaaacgca acatttgctg aatatctcat
      961 ttttagtaca aatgtaccga aaagcggagg ttacggcata gaggtttata actcagcagg
     1021 aaatgttgta ttttcatcaa accacaaatt tttaagacct attgaatatg tcgatctaaa
     1081 tccatcaaaa aatgttttta gatttacagg gcaagcaaat aggcaatatg gcattatctt
     1141 atccaatttt ggctttgatt ttgtcattaa ctacgataac ggatattcaa catctagatc
     1201 tgccaaagta agtggtaatt ttattgaatt tgggttctgt aaataccatt attctggttt
     1261 gtataagacg ggaatgagtt ataattcaaa agcaatgtat tttaatgctc tggttgtaga
     1321 tataacaggc tattaaacat taaacgcctt catttaatag aggcgaacta aaattctgat
     1381 tacacattca tcgccgcttg tagcaataca agcggtcttt ttttatcaac aatccacaaa
     1441 aggaaaaatt atgacaactt ttaacaaaat cttaaaccca atgtactcaa ctatcgcaag
     1501 ttactcaact caagatgacg gctcactcaa tgctaagtat gttgttggca caggtgatga
     1561 taccgatggc gaggtaacaa actttgtaat catcacaagt gagtacaaat atattgatgc
     1621 tcaatcagcc aaagcgatta cagatgcacc gctaacaaaa gaggatattg gcaaaacgcc
     1681 aacgcagatt atgttaggtc gtatctataa gcacttaaaa gagacggggc agattgtagt
     1741 gtaggggtct aaatgcaaaa gcataaattt aagtttttca gaggcgatga cgtaagttat
     1801 cgcctttttt ttaggcaaac aaatggcgag cctgtaaatt tagagggtat taggctggat
     1861 ttacacgcca tagtagaggg cagcacagag cctcaaattg agctaaccgt cgattagtgg
     1921 ttgtggatga gcaatcatta aaactgcaag agttaaagca gactattaat gagcaaaccg
     1981 agcaaattaa aacactcgga acagtggtaa ataaacttat tgatgcatta caacagtcac
     2041 aaagtttaaa tgtaagatca gaatctgctg tagcagcaac cgaaaatcaa gatcatttaa
     2101 ctgatggtgt gcagtatcaa ggcccaggac gtgctagagc ttaactctgt taacatctgc
     2161 actcaaaacg gctatagctc tagccgtttt ttgtaatttt tcgcacgttt taacaggcaa
     2221 atttggcaaa attagccatt gtgattttat tttctataat taagccccga gaggggcttt
     2281 aaagtcagtg ctaatctatt gttaattttt taagaattga tgataagtta gcttttttgg
     2341 ctttaaccaa ttcggtcaaa tcagcccaaa ccccgaaagg gattttacgt tcaccagcca
     2401 cccattcgcg gacac
//
LOCUS       DANMCL010000163         2341 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.168, whole genome shotgun sequence.
ACCESSION   DANMCL010000163 DANMCL010000000
VERSION     DANMCL010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.168"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..689)
                     /locus_tag="PXF40_002674"
     CDS             complement(<1..689)
                     /locus_tag="PXF40_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HDL5803946.1"
                     /translation="MIITMKDIAKEANVSLGTVSNVLNGKSNVSLAKIEKVQAAVEKL
                     GYRKNIQASTLKSGTSNKIAIILPNITELKYACLYENLDLICTQNDLSLILYLTHNRE
                     DREKQIIQNIKQDNYLRIILDSCLNNADYYYDEVKDQDKFIFVYRYLKNAKHFIGFDY
                     LPVIGDLIKHMKAHHLENIAFIKDNNCDWGGTVCDYLASYSQKNNIKILFFTQKESIH
                     KLSFELAQSIHR"
     gene            complement(851..2191)
                     /gene="gdhA"
                     /locus_tag="PXF40_002675"
     CDS             complement(851..2191)
                     /gene="gdhA"
                     /locus_tag="PXF40_002675"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005616859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HDL5803947.1"
                     /translation="MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPKYTQ
                     QGLLGRIVEPERVISFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMSELYRHIGADTD
                     VPAGDIGVGGREIGYMFGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFAES
                     MLATKGQQIEGKSVVISGSGNVAQYAAEKVIQKGGKVLTVSDSNGYVLFPESGMTEAQ
                     LQALLELKNERRERLSVYATEQGLKYFDGQKPWGVKCDIALPCATQNELDTEDAKELV
                     KNGCICVAEGANMPTTLGGVEVFIGAKILYAPGKAANAGGVATSGLEMSQNAIRLSWS
                     REEVDQRLFNIMKAIHENCVENGTEADGFVNYVNGANIAGFKKVANAMLEQGIV"
BASE COUNT          714 a          478 c          377 g          772 t
ORIGIN      
        1 cgatgaatgc tttgagccaa ttcaaacgat aatttatgaa tggattcctt ttgggtgaaa
       61 aacaatattt taatattatt tttttgacta taacttgcca aataatcgca tactgttcca
      121 ccccaatcac aattattatc tttaatgaag gcaatatttt ctagatgatg agctttcata
      181 tgctttataa gatcaccaat tacaggaaga taatcaaaac caataaaatg ttttgcattt
      241 ttaaggtaac gataaacaaa aataaattta tcttggtctt ttacttcatc gtaataatag
      301 tctgcattat ttaggcaact atctaaaata atacgcaaat agttatcttg ctttatattt
      361 tgaataattt gtttttctct atcttctcga ttatgcgtta aataaagaat gagagataaa
      421 tcattttgcg tacaaattaa atcaagattt tcatataaac aggcatattt cagctctgta
      481 atattgggca atataatagc aattttatta cttgtgccac tttttaacgt agaggcttga
      541 atatttttac gataacccaa cttttcaacg gcagcttgta ctttttctat tttagctaag
      601 ctaacattac tttttccgtt taatacattc gatactgttc ctaacgaaac atttgcttcc
      661 tttgcgatat ctttcatcgt aatgatcata tactgccctt tcacatactg ctaaaactga
      721 gattggcata gattttacca taattggcaa atgaaatacg atttcaattt agcttgtctc
      781 tagctacaac ctaaaataaa aaaactgcct cgatatatcg aggcagttct tgaataatag
      841 ggataataaa ttaaacaata ccctgttcta acatcgcatt tgccactttt ttgaaaccag
      901 caatattcgc accgtttaca tagtttacga aaccatctgc ttcagtacca ttttctacgc
      961 agttttcgtg aattgctttc ataatgttga ataaacgctg atctacttct tcacgactcc
     1021 aagatagacg aattgcattt tggctcattt ctaaacctga ggttgccaca ccacctgcgt
     1081 tagccgcttt acccggagca taaaggattt tcgcaccgat aaagacttca acaccaccta
     1141 atgtggttgg catatttgca ccttctgcca cacaaataca gccgtttttc actaattctt
     1201 tagcatcttc ggtatctaat tcgttttggg ttgcacaagg taaagcgatg tcacatttca
     1261 caccccacgg tttttgaccg tcaaagtatt ttaagccttg ttctgttgca tacacagata
     1321 agcgttcacg gcgttcgttt ttcaactcta ataatgcttg taattgtgcc tctgtcatac
     1381 cggattcagg gaataagaca taaccgttag aatctgaaac cgttaatact ttaccgcctt
     1441 tttgaatcac tttttcagct gcatattgtg ccacgttacc cgaaccggaa attaccactg
     1501 attttccttc gatctgctga cctttagtcg ctaacataga ctctgcaaaa tacaccgcac
     1561 cataaccagt tgcttccgga cgaattaagc taccacccca agtcagcgat ttaccggtta
     1621 atactgaagt aaattcattg cgtaattttt tgtattgacc gaacatatag ccgatttcac
     1681 gacctcccac gccgatatcg cctgcaggaa cgtcagtatc agcaccaatg tggcgatata
     1741 attcgctcat aaacgcttgg cagaaacgca ttacttcggc atcagatttg cctttcgggt
     1801 caaagtctga accaccttta ccaccgccca ttggcaatgt cgttaacgca tttttgaata
     1861 cttgctcaaa ggctaagaat tttaatacgc ctaaatcaac ggttgggtgg aaacgaatac
     1921 cgcctttgta tggaccgatt gctgagttca tttgtacacg gtaaccacgg tttacttgca
     1981 cttgaccttt atcatcaacc caagtgacac ggaagctaat tacacgctca ggctcaacaa
     2041 tacgccctaa taaaccttgc tgggtatatt tcggattttt agctaagaaa ggggcaaggc
     2101 taccgaacac ttcttcaacc gcttgatgga aaggggcttg gttcggatca cgttgtttga
     2161 ttttttggaa aagggcgttt aaatcgctca tattatactc ctgaataaat tgatgatgtt
     2221 gtgtatttaa gatgagcgaa gtctagcaag caattttagc tttgaaaaga tagattagaa
     2281 aaatttatca ttaaaataag aaaaattaag tttaaatgct tattttttat tcaaaaaaat
     2341 a
//
LOCUS       DANMCL010000164         2320 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.169, whole genome shotgun sequence.
ACCESSION   DANMCL010000164 DANMCL010000000
VERSION     DANMCL010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.169"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1854
                     /locus_tag="PXF40_002676"
     CDS             <1..1854
                     /locus_tag="PXF40_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HDL5803948.1"
                     /translation="LVRKKDIKLTPEEAVRQLYLMNLHYEYDYPFERMELEYSVVFGR
                     EKKRADIVIFDRDNPNAVYIMVELKKPKLKDGKEQLKSYCNATGAPIGVWTNGESISY
                     YNRRDPNYFKDIPDIPNAQQKLSDLLQERWTIQDLIDNDKIAKQRKSLKDLVIEMEDE
                     VLANAGVDVFEELFQLIFTKLYDEMESTRNKSRYLEFRNYGDTESELKAKIQSLFDRA
                     KNKWEGVFAESAKINLSPSHLAICVSSLEEVKLFNSNLDVVDEAFEYLINKSSKGEKG
                     QYFTPRYVIDMCVKMLDPKPEETVIDTAAGSCGFPVHSIFHVWEKQLKARGLERSHLF
                     TAEEKLPEQTDYVKEKVFAIDFDEKAVRVARTLNLIAGDGQTNVLHLNTLDYERWEDF
                     TKEEEWNDVYGEGWKKLRKLRKTKNENRDFQFDVLMANPPFAGDIKETRILARYELGK
                     NSKGKQQSKVGRDILFIERNLDFLKDGGRMAIVLPQGRFNNSSDKYIRDFIAERCRIL
                     AVVGLHGNVFKPHTGTKTSVLFVQKWHDELCPKVEDYPIFFATMQKSSKDNSGDKIYV
                     KNADGTLKLDNHQHLIVEHDLFNHDNSTQDGIAEAFIEFAKKEKLSFVGKD"
     gene            1953..>2320
                     /locus_tag="PXF40_002677"
     CDS             1953..>2320
                     /locus_tag="PXF40_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HDL5803949.1"
                     /translation="MDSTFFLKKYLNHPSFNFPLSLNEVSLIKSGTTPTDRDDNLKEG
                     VVLLKTNDIRNNLLNKYSSVDYFISEDINEKMISSQLKEGDVLVNIVGATLEVVGRVA
                     YVSSTFPKANITQAMSFVRL"
BASE COUNT          803 a          358 c          470 g          689 t
ORIGIN      
        1 cttgttcgta aaaaggatat taagctcaca cctgaagaag cagtacgcca actctattta
       61 atgaatttgc attatgaata tgattatcca tttgaacgaa tggaattaga atattctgtt
      121 gtattcgggc gtgagaagaa acgagcggat attgtcatct ttgatagaga taatcctaac
      181 gctgtctata ttatggtgga gctgaaaaag ccgaaattaa aagatggtaa agaacaatta
      241 aaatcttatt gtaatgcgac tggagcacct attggtgtat ggacaaatgg cgaaagtatt
      301 tcttactata atcgccgtga tcctaattat tttaaagata ttcccgatat tccgaatgct
      361 caacaaaaac tttctgattt attacaagaa cgttggacta ttcaagatct gatagataat
      421 gacaaaattg ccaaacaacg taaatcattg aaagatcttg ttattgaaat ggaagatgag
      481 gtactggcga atgctggagt tgatgttttt gaagagttat ttcaacttat ttttactaaa
      541 ctctatgatg aaatggaaag tacacgcaat aaaagtcgtt atttagagtt tcgtaactat
      601 ggtgataccg aaagtgaatt aaaggcaaaa attcaatctc tatttgatcg tgcaaaaaat
      661 aaatgggaag gcgtatttgc tgaaagtgcc aaaatcaacc tttccccttc gcatttggcg
      721 atttgtgtat cttcattgga agaagtaaag ctgtttaatt ctaaccttga tgtagtggat
      781 gaagcatttg agtacttaat taataaatcc agtaaaggag agaaaggaca atactttacg
      841 cctcgttacg tcattgatat gtgcgtaaaa atgctcgatc caaaacctga agaaacagtc
      901 attgataccg cagcaggaag ctgtggtttt ccagttcatt ctatttttca cgtttgggaa
      961 aaacaactta aagcgagagg attagaacgc tcacacttat ttactgctga agaaaaattg
     1021 cctgaacaaa cagattatgt gaaagaaaaa gtctttgcga ttgatttcga tgaaaaggca
     1081 gtacgtgttg ctcgtaccct aaacttaatc gcaggagatg ggcaaaccaa cgtactacat
     1141 ttaaatacct tagattatga acgttgggaa gattttacta aggaagaaga atggaatgat
     1201 gtatatggag aaggctggaa aaaattaaga aaattacgta aaactaaaaa tgaaaatcga
     1261 gatttccaat ttgatgtgct aatggcaaat ccgccttttg ccggtgatat taaagaaact
     1321 cgtatattag ctcgctatga attaggcaaa aatagcaaag gaaaacagca atccaaagtc
     1381 ggacgagata ttttatttat tgaacgcaat ttagatttct taaaagacgg tggacgaatg
     1441 gcgattgtgc taccacaagg gcgttttaac aattccagcg ataaatatat tcgtgatttt
     1501 attgcagagc gttgccgcat tttagctgtt gtgggcttac acggaaatgt gtttaaacca
     1561 cataccggca caaaaacttc cgtactattt gtgcaaaaat ggcacgatga actttgcccg
     1621 aaagtagagg attacccgat tttctttgcc acaatgcaga aatccagcaa agataattca
     1681 ggcgataaaa tctatgttaa aaacgctgat ggcacactca aattagacaa ccatcaacac
     1741 ctaattgtgg agcacgatct atttaatcac gataatagta cccaagacgg cattgcagaa
     1801 gcctttattg aatttgctaa aaaagaaaag ctctcttttg tgggaaagga ttaagcccat
     1861 ttgaccctgc taaatatcag gcattgttag atgggctaga ggtgagcgag gtttatttga
     1921 gtaaggttcg ttctgcaagt tattcggaac gaatggatag tactttcttt ttgaaaaaat
     1981 acttaaacca tccgagtttt aattttccat tatcgctgaa tgaggtttct ctgattaaaa
     2041 gtggtacaac accaacagat cgagatgata acttaaaaga gggggttgtc ttattaaaaa
     2101 ccaatgatat taggaataat ctattaaata agtactcttc ggtagattat tttattagcg
     2161 aagatatcaa tgagaaaatg atttcatcac aactgaaaga aggggatgtt ttagtaaata
     2221 tcgttggtgc aactttggag gttgttggtc gggtagctta tgttagtagc acttttccaa
     2281 aagcaaatat tacacaagca atgtcttttg taagattaaa
//
LOCUS       DANMCL010000165         2302 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.170, whole genome shotgun sequence.
ACCESSION   DANMCL010000165 DANMCL010000000
VERSION     DANMCL010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2302
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.170"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            108..536
                     /locus_tag="PXF40_002678"
     CDS             108..536
                     /locus_tag="PXF40_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014992182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HDL5803950.1"
                     /translation="MTHDWLYWALASALFAALTAIFAKVGLQGVDSDFATFIRTVVII
                     IALIAFLTYSGKWQPLDSLSSKNWLFLILSGLATGLSWSAYFKALQMGNASQVAPIDK
                     FSLVLVTLFAVIFLGERPSGQDWLGIGLVAGGVLLLAFKR"
     gene            542..1264
                     /locus_tag="PXF40_002679"
     CDS             542..1264
                     /locus_tag="PXF40_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase superfamily
                     protein"
                     /protein_id="HDL5803951.1"
                     /translation="MQNFANIEIAFIHRKAPLPSDFSYPEMPGGLTEKQVQKWQSRRV
                     AFFLLTELFKKHHLDLDLLADMQRSPSGRTFVDSEQIDFNISHSGEWIAVIFSYSFAK
                     LAVGIDIEHPQKIRRYHDLICHYGNAEEQNVLLANHSPILSNLAERFYLSWCLREAIL
                     KSQGVGIVKLSEVKHLPLEKQIFSAHCPKGKLHFVSELPFYLSYFYQQPQNMLLSEPL
                     LYHWQNGQFQPIKCQSLVYDVN"
     gene            1274..1693
                     /gene="psiE"
                     /locus_tag="PXF40_002680"
     CDS             1274..1693
                     /gene="psiE"
                     /locus_tag="PXF40_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HDL5803952.1"
                     /translation="MPKKSLEEHHSSFGKIASETFQWIMNIALLVTGALLSYSLFAEA
                     YSLYELSFSDSEKFQIVEKIVIFFLYFEFLALIVKYFKSNYHFPLRYFLYIGITAMVR
                     LIIVDHSNALHTLLFALSILVMIIALYIVHTDRLHKS"
     gene            1702..>2302
                     /locus_tag="PXF40_002681"
     CDS             1702..>2302
                     /locus_tag="PXF40_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HDL5803953.1"
                     /translation="MKLTQYQHNDLQILNRETVYKGHFELQKITFRHKLFSGEMSGEV
                     VRELLIKGEAAALIAYDPTLDKVVLIEQVRIGAYDAGQKKSPWLLELVAGMVDKGNEE
                     PAEVAMREAKEEAGLEVTTVQHALSVWDSPGGQLERLHLFLGLIDSTQVKSGEVHGLL
                     EEENEDILVHVVSREQAYQWVEDGTIDNVIAVIGLQWLQL"
BASE COUNT          666 a          462 c          483 g          691 t
ORIGIN      
        1 accaaaaatt ttgcgaagat caaatagaaa atttgataaa ctagaactaa ctcgcatttt
       61 attgctccat atgattagaa attaacctaa aatattaaaa ttttgttatg acacacgatt
      121 ggctctattg ggcattagcc tctgcacttt ttgcagcatt aaccgccatt tttgccaaag
      181 ttggcttaca aggcgtagat tctgatttcg ccacttttat tcgcacggta gttattatta
      241 ttgcacttat tgcctttctc acttacagcg gaaaatggca gccgttagat agcttgagca
      301 gcaaaaactg gctgttttta atcttatccg gcttggcaac aggattgtct tggtcggcgt
      361 atttcaaagc attgcaaatg ggtaatgctt cccaagtcgc tccaatcgat aaattcagct
      421 tggtgttagt tacccttttt gcagtaattt tcttaggcga acgcccaagc ggacaagatt
      481 ggcttggcat tggcttagtt gctggtggcg tactgttact tgccttcaag cggtgatttt
      541 tatgcaaaat tttgcaaata ttgaaattgc gtttattcat cggaaagcac ctctgccgag
      601 tgatttctcc taccctgaaa tgcccggcgg tttaactgaa aaacaggtgc aaaaatggca
      661 aagccgccga gtcgcctttt ttctgctgac ggaattgttt aaaaaacacc atctggattt
      721 agatttatta gctgatatgc aacgctcccc aagcggtcgc acttttgtcg attctgagca
      781 aattgacttt aacatcagcc attcagggga atggatagcg gtcatttttt cgtattcttt
      841 tgcaaaatta gcggtcggca ttgatattga acacccacaa aaaatcagac gttaccacga
      901 tttaatctgc cattacggaa acgctgaaga acaaaatgtt ttattagcca accactcccc
      961 cattctaagc aacctcgccg aacgctttta tttgagctgg tgcttgcgag aggcgatatt
     1021 gaaatcgcaa ggggtgggga ttgtgaaact gtccgaagta aaacatttac cgttagaaaa
     1081 acagatcttt tccgcccatt gtccgaaagg caagctgcat tttgtgagcg aactgccgtt
     1141 ctatttaagc tacttctatc aacaacctca aaatatgcta ttatctgaac ctttgctata
     1201 ccattggcaa aacgggcagt ttcagcctat aaagtgccaa tcacttgttt atgatgttaa
     1261 ttaaggataa cgaatgccta aaaaatcttt agaagaacac cattccagtt ttggcaaaat
     1321 tgcttccgaa acctttcagt ggattatgaa tattgccttg ctagtaacag gagcattgct
     1381 ttcttactcg ctgtttgctg aagcctattc actctatgaa ctttccttta gcgacagtga
     1441 gaaattccaa attgtagaaa aaatagtaat tttctttctc tattttgagt ttcttgcgtt
     1501 gattgtgaaa tatttcaaat cgaattatca ctttccgtta cgctatttcc tctatatcgg
     1561 gattactgcc atggtgcgtt tgattattgt cgatcattct aatgcgttgc atacactatt
     1621 attcgcactc tctattttgg tgatgattat agcattatat attgtacaca ccgatcgttt
     1681 acataaaagc taggaactaa tatgaagcta acccaatatc agcacaatga tttacagatt
     1741 ctaaaccgag aaaccgtcta taaagggcat tttgagctac aaaaaatcac tttccgccat
     1801 aagctgtttt ccggtgaaat gagcggtgaa gtggtgcgtg aactcttaat taaaggcgaa
     1861 gcggcggctt taattgccta tgatccaacc ttagataagg tagtattaat tgagcaagtg
     1921 cggattggag cttacgatgc aggacagaaa aaatcccctt ggttgctgga attggttgcc
     1981 ggtatggtag ataaaggcaa cgaagagccg gcagaagtgg caatgcgtga agccaaagaa
     2041 gaagccggct tggaagtcac aacagtgcaa cacgccttaa gcgtatggga cagtcccggt
     2101 ggacaactgg aacgcttgca cctgtttctc ggcttgattg acagcaccca agtgaaatcc
     2161 ggcgaggtac acggcttact ggaagaagaa aatgaagaca ttttggttca cgttgtaagc
     2221 cgtgaacagg catatcaatg ggtagaagac ggcacaattg acaatgtgat tgcggtaatt
     2281 gggctacaat ggttgcaatt aa
//
LOCUS       DANMCL010000166         2148 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.171, whole genome shotgun sequence.
ACCESSION   DANMCL010000166 DANMCL010000000
VERSION     DANMCL010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2148
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.171"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            492..2024
                     /locus_tag="PXF40_002682"
     CDS             492..2024
                     /locus_tag="PXF40_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HDL5803954.1"
                     /translation="MNLVDYSTSLWSVLPALIALILAIVTRKVIISLSIGILFGAFML
                     TNSNFLDALTYIKNSVVSLVYKGAEEGLNSNNVNIILFLLLLGVLTSLLSISGSNQAF
                     ANWAQKKVKGKRGAKLMAAGLVFFTFIDDYFHSLAVGAIARPVTDKFRVSRAKLAYIL
                     DSTAAPMCVLMPISSWGAYIITLIAGLLATHSITGYSPLGAFMTMSAMNFYAIFAMIM
                     VFFVAYFSFDIGSMARFERQAAHLAELDDEQIETKGHVRDLILPIIALIVATVSMMMK
                     TGADALAESGASFSILGAFENTTVGISLVVGGVAGLIVATICIITSGNISFKNYVRAY
                     GLGVKMMSGAITILFFAWTINGVVSDMQTGKYLSGLVAESIGAEFLPAILFVLAAAMA
                     FSTGTSWGTFGIMLPIGASMAVHSDPALIIPCLSAVMAGAVCGDHCSPVSDTTILSST
                     GAQCNHMDHVISQLPYALLVATASIIGYLVVGFTQSAVLGFIATAVVMAILILLFKEK
                     KH"
BASE COUNT          598 a          350 c          445 g          755 t
ORIGIN      
        1 ctttagccaa agcccttaag ctgcggatat tcaaaagact ttttaaagct gacattttac
       61 tctcctaaat taatgtttta tataagtagc ttttatgctc cttttatcat atctcaaaag
      121 gcattttagg taaataagca taaataaaaa aatagatact ttatatctaa agatattcgt
      181 gctatcttaa acactgtcct acaaattgta gaggtgcgaa ttcaataagt atttcttctg
      241 agtggaaaac gatgaagggg aaggaaaggt gaatttgccg aaatcaatta agcgtcatct
      301 taattggttg gggtcgttgt cgaaagaaac gacactgtcg tagtaaatgc tacggagtgc
      361 tactgttagg gtgggtttca gatatttcac atttgccttc ctttcatatt tatttttata
      421 aatatcccag tagatctctt gtttggctat tcttatttat acaaattata cacagtcatt
      481 ttagaggttt tatgaatcta gttgattatt ctacgtcact ttggtcggta ttgccggcac
      541 tgattgcgct aatattggca attgtgacac gcaaggtgat tatttcactt agcatcggta
      601 ttctctttgg tgcatttatg cttactaata gcaattttct tgatgcactt acttatatta
      661 aaaatagcgt tgtttcttta gtttataaag gggctgaaga aggattaaat tcaaataatg
      721 ttaacattat tttatttttg cttttattag gggtattaac gtcattatta agtatttcag
      781 gtagtaatca ggcgtttgcg aattgggcgc agaaaaaggt aaaaggcaaa cgaggcgcaa
      841 aattaatggc ggcaggtttg gttttcttta cctttattga tgactatttc cacagtttag
      901 cagtaggtgc gattgcccgc cctgttacgg ataaattccg tgtttctcgt gctaaattag
      961 cttatatttt agattctacc gccgctccaa tgtgcgtgtt aatgccaatt tcaagctggg
     1021 gggcttatat tattacctta atagctggct tattggctac gcattccatc acaggctatt
     1081 cgccactagg cgcatttatg acaatgagcg caatgaactt ttacgccatt tttgcgatga
     1141 ttatggtgtt ctttgtggca tatttctcat ttgatattgg ttcgatggcg cgttttgaac
     1201 gtcaagcagc gcatttagca gaattagatg atgagcaaat tgaaacgaaa ggacacgtgc
     1261 gcgatttgat tttgccaatt attgcactta ttgttgctac agtctcaatg atgatgaaaa
     1321 caggtgcaga tgcactggcc gaatcaggtg cttcattttc tatactaggt gcttttgaaa
     1381 atactacggt aggcatttca ttagttgttg gtggtgtggc agggcttata gttgcaacta
     1441 tttgtatcat tacaagcggt aatatttctt ttaaaaatta cgtccgtgct tatggcttag
     1501 gtgtgaagat gatgtctggt gcaatcacta ttctcttctt tgcgtggaca ataaacggcg
     1561 tagtaagtga tatgcaaaca gggaaatatc tatcaggatt ggttgcagaa agcattggag
     1621 cagagttttt acctgcaatt ctatttgtgt tagccgcagc aatggcgttt tcaacaggaa
     1681 ctagctgggg aacatttggt attatgttgc caattggagc ctcaatggca gtgcattcag
     1741 atccagcatt aattattcct tgtttatctg cagtaatggc tggtgcggtt tgtggtgatc
     1801 actgttctcc agtatctgat accactattc tttcttcaac aggcgcacaa tgtaatcata
     1861 tggatcatgt catttctcaa ttaccttatg ctttattagt tgcaacagct tctattattg
     1921 gttacttagt ggttggcttt acccaatcag cggtattggg atttattgct acagctgttg
     1981 ttatggcaat actcattttg ctttttaaag aaaaaaagca ttaatttccg aaaatgtgaa
     2041 gggaatcaca gaatgagatt tattgatgag ataaaatagc actcaagata tggatatcga
     2101 atgttgtgtt atataaatct taaaataaga tcctcctagc attagcgt
//
LOCUS       DANMCL010000167         2145 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.172, whole genome shotgun sequence.
ACCESSION   DANMCL010000167 DANMCL010000000
VERSION     DANMCL010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.172"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..490
                     /locus_tag="PXF40_002683"
     CDS             <1..490
                     /locus_tag="PXF40_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803955.1"
                     /translation="LSAKNNESKGDRNYQLYIDLATGELVSKLGKGLTTRAFDAAVKA
                     FENAFNAKDTAENTAPVESKETEQENKQETTKLVITKPTLKGSEKQIDSANEIINLFI
                     AKIGDTSIPVTATQEQITQAQAMVDNFFAMTNAGKWIEKFKGLNDNSEPKQFWLSVKY
                     GW"
     gene            560..1078
                     /locus_tag="PXF40_002684"
     CDS             560..1078
                     /locus_tag="PXF40_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803956.1"
                     /translation="MTTQVTPQIMRIIGQIVAATYGDDVPTNVQTIILRYPIRGIGFI
                     SSRRELSINNGEIARLMDKIPGDLEDPKDGMPFDCQGAFWLGYYQYCKLSNDVKNYTS
                     KELSIIGESLYGTQWQSNLARDLRLSDARRVREWVAGERKIPFGVWADLTELVKAKKA
                     NLSSILKKLTID"
     gene            complement(1225..1536)
                     /locus_tag="PXF40_002685"
     CDS             complement(1225..1536)
                     /locus_tag="PXF40_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803957.1"
                     /translation="MTKTKHKHPLAEAFYQLGKDVGEINRRLVVVDEQSLKLQELKQT
                     INEQTEQIKTLGTVVNKLIDALQQSQSLNVRSESAVAATENQDHLNDGVQYQGPGRAR
                     A"
     gene            complement(1529..1678)
                     /locus_tag="PXF40_002686"
     CDS             complement(1529..1678)
                     /locus_tag="PXF40_002686"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803958.1"
                     /translation="MDNILITIHPTETIDITIDKLVVIHIGEEYGDTPDFLTIYQQAK
                     ELNDD"
     gene            complement(1912..>2145)
                     /locus_tag="PXF40_002687"
     CDS             complement(1912..>2145)
                     /locus_tag="PXF40_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803959.1"
                     /translation="QDDGSLNAKYVVGTGEESDSEVTNFVIITSEYKYIDAQSAKAIT
                     DAPLTKEDIGKTPTQIMLGRIYNHLKETGQIVV"
BASE COUNT          666 a          412 c          432 g          635 t
ORIGIN      
        1 cctttcagca aaaaataacg aaagcaaagg tgatcggaat taccagttgt acattgacct
       61 agccacaggc gagttagtga gcaaacttgg caaaggatta acaaccagag cgtttgatgc
      121 tgccgtaaaa gcttttgaaa acgcttttaa tgctaaagac accgctgaaa atacagcgcc
      181 ggtagaaagc aaagaaacag agcaagagaa caaacaagaa acaactaagc ttgtaatcac
      241 aaaaccaaca ttaaaaggct ctgaaaaaca aattgattcg gcaaacgaaa tcatcaatct
      301 ttttattgcg aagattggtg atacctctat cccagtaaca gcaacgcaag aacaaattac
      361 tcaagctcaa gcaatggtag ataatttttt tgcaatgaca aacgctggaa agtggatcga
      421 aaaatttaaa ggtctaaatg ataatagcga accaaagcaa ttttggttat ccgtaaaata
      481 tggatggtag attgagataa caaataagcc gtaagagcaa aggcttacgg ctaaaacaaa
      541 cagataactg gagattatta tgactacaca agtaacacca caaattatgc gcattatcgg
      601 gcaaattgtc gctgctactt atggtgacga tgtgccaaca aacgtacaga caataatctt
      661 gagataccct ataagaggca tagggtttat ctctagtcgc agagagctat ctattaacaa
      721 tggagagata gcaagattaa tggataaaat accaggcgac ctcgaggacc ctaaagacgg
      781 gatgcctttt gattgtcagg gggcgttttg gcttggatac tatcaatact gcaaattaag
      841 taacgatgta aaaaattaca catcaaaaga gctatccatc attggcgagt cattgtatgg
      901 cactcaatgg cagtctaatc tagcgagaga tttgagatta tctgatgctc gccgtgtccg
      961 cgaatgggtg gctggtgaac gtaaaatccc tttcggggtt tgggctgatt tgaccgaatt
     1021 ggttaaagcc aaaaaagcta acttatcatc aattcttaaa aaattaacaa tagattagca
     1081 ctgattttaa agcccctctc ggggcttaat tatagaaaat aaaatcacaa tggctaattt
     1141 tgccaaattt gcctgttaaa acgtgcgaaa aattacaaaa aacggctaga gctatagccg
     1201 ttttgagtgc agatgttaac agagttaagc tctagcacgt cctgggcctt gatactgcac
     1261 accatcattt aaatgatctt gattttcggt tgctgctaca gcagattctg atcttacatt
     1321 taaactttgt gactgttgta atgcatcaat aagtttattt accactgttc cgagtgtttt
     1381 aatttgctcg gtttgctcat taatagtctg ctttaactct tgcagtttta atgattgctc
     1441 atccacaacc actaatcgac ggttaatctc tcctacgtct ttacctaatt gataaaatgc
     1501 ttctgcaagt gggtgtttgt gtttagtttt agtcatcgtt aagctccttt gcttgttggt
     1561 atatagttaa aaagtcaggt gtgtcaccat actcctcacc tatatggata actaccagtt
     1621 tgtctatggt gatatcaata gtttcggttg gatgtatagt gattaagata ttgtccatat
     1681 tcccgcctta aatttgggtt tggtcaggga taagttggat cgtgccgtag tactgccatt
     1741 ttgggtggat agctcaattt gaggctctgt gctgccctct actatggcgt gtaaatccag
     1801 cctaataccc tctaaattta caggctcgcc atttgtttgc ctaaaaaaaa aggcgataac
     1861 ttacgtcatc gcctctgaaa aacttaaatt tatgcttttg catttagacc cctacactac
     1921 aatctgaccg gtttctttga ggtggttgta gatacgtcct aacataatct gcgttggcgt
     1981 tttgccaata tcctcttttg ttagcggtgc atcagtaatc gctttggctg attgagcatc
     2041 aatatatttg tactcacttg tgatgattac aaagtttgtt acctcgctat cgctctcctc
     2101 acctgtgcca acgacatatt tagcattgag tgagccgtcg tcttg
//
LOCUS       DANMCL010000168         2051 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.173, whole genome shotgun sequence.
ACCESSION   DANMCL010000168 DANMCL010000000
VERSION     DANMCL010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 2051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2051
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.173"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            246..1196
                     /gene="coaA"
                     /locus_tag="PXF40_002688"
     CDS             246..1196
                     /gene="coaA"
                     /locus_tag="PXF40_002688"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HDL5803960.1"
                     /translation="MSLEKTSKITPFLTFDRQQWADLRKSVPLKLTEQDLKPLLGFNE
                     DLSLEEVRTIYLPLARLIQYYIEENLKRQTVLHRFLGIEPPKVPYIISIAGSVSVGKS
                     TSARILQALLSHYPKERKVDLITTDGFLYPLATLTEKNLLKKKGFPESYDIHSLIRFV
                     SDIKSGKRNVKAPIYSHLTYDIIPNQFNTVDQPDIVILEGLNVLQSGMNYPSSPHNVF
                     VSDFVDFSIYVDAEESLLKKWYINRFLKFRRSAFADPNSYFHHYASLSEQEAIETAST
                     IWEEINGLNLRQNILPSRERANLILIKGQDHAIETVKLRK"
     gene            1349..1888
                     /locus_tag="PXF40_002689"
     CDS             1349..1888
                     /locus_tag="PXF40_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005598787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HDL5803961.1"
                     /translation="MNKKFLLPLILFLALSVAFLVQLARNSQGDDPKKLESALIGKTV
                     PSFNLESVLDEKQTIDQNIVKTGKPRLLNVWATWCPTCYAEHEYLTILAKQGVEIVGI
                     DYKDERPKAIKFLANYGNPYKAIIFDPKGSLGLDLGVYGAPETFIIDGNGVIQYRHAG
                     DVNDQVWNQVLKPIYDGLK"
BASE COUNT          652 a          405 c          361 g          633 t
ORIGIN      
        1 ttgctgtgtc gtaagcaagt gatgtgcatt atagggaaat tttaacagcg tgcaagtgtt
       61 ttttaaaaaa atattaaaaa aagcgttctt tcgattttta aatatacaaa atgactattt
      121 tttgtaaaat acaacggatt ttctctgcat aactacggca aaataagtgc atatattgta
      181 tagttacgcc cttaatttgg tatttaatta ccttaatatt ccagcaaaaa attgagattt
      241 tggctatgag ccttgaaaaa accagcaaaa ttactccttt tctcactttt gatcgccaac
      301 aatgggctga tttacgcaaa tccgttccat tgaagctgac cgagcaagac ctaaaaccgc
      361 ttttaggctt taatgaagat ctttcattag aagaagtacg cactatttat ttaccgcttg
      421 cccgtttaat tcaatactat atagaagaaa acttaaaacg ccagacagtc ttacatcgct
      481 ttctcggcat tgaaccgcca aaagtccctt acattattag tattgccggc agcgtatcgg
      541 ttgggaaaag tacctctgcc cgtattctgc aagctctgct ctcccattac cctaaagagc
      601 gaaaagtgga tttaattacc accgacggtt ttttatatcc acttgcaacg ctaaccgaaa
      661 agaacttact caagaaaaaa ggctttccgg aatcttatga tattcacagc ctgattcgct
      721 ttgtatctga tattaaatcc ggcaaacgca atgtgaaagc tccgatttat tcacatttga
      781 cctacgatat tatcccaaat caatttaata cggtggatca acccgatatt gtgattttag
      841 aagggctaaa cgtgttacaa agtggaatga actacccgtc cagcccacat aatgtatttg
      901 tatcggactt tgtggatttt tctatttatg tggatgccga agaaagtttg ctgaaaaaat
      961 ggtatatcaa ccgtttcttg aaattccgcc gcagtgcctt tgccgaccca aactcctatt
     1021 tccaccatta tgcgagtttg tccgagcaag aagcgattga aaccgcctca acgatttggg
     1081 aagagatcaa cggcttaaat ttacgccaaa atattctccc aagccgagag cgtgccaacc
     1141 tcattttaat caaagggcaa gaccacgcca ttgaaacggt aaaattacgc aaataatatt
     1201 ttgcaaataa ttgggctttt tcgaccgctt gtaatacctt aaaatccgtt gaataccact
     1261 caacggattt tttatttaaa tcaatgctta ttcaactatt ttttggtaag ctaacgactt
     1321 tgagagtgat tgatattagg catatacaat gaacaaaaaa tttctacttc ctttaattct
     1381 ctttttggcg ttatctgtgg catttttggt tcaactcgct cgcaactcgc aaggcgatga
     1441 tccgaaaaaa ttagaatcag ccttaattgg caaaacagtt ccgagcttta atttagaatc
     1501 ggtattagat gaaaaacaga caatcgacca aaatatcgtc aaaaccggca aacctcgcct
     1561 gcttaacgtg tgggcaactt ggtgtccgac ttgttatgcc gaacacgaat acttaaccat
     1621 tttggcaaaa caaggggtgg aaattgtcgg tattgattat aaagacgaac gcccaaaagc
     1681 gattaaattc ttagccaatt acggcaaccc ttataaagcg attatttttg acccgaaagg
     1741 ctcactcggt ttagatttag gtgtttatgg tgcacccgaa acctttatta ttgacggcaa
     1801 cggcgtgatt caataccgcc acgccggcga tgtaaacgac caagtgtgga accaagtgct
     1861 taaaccgatt tatgatggat taaagtaaat gtttgtattt cctgctgaca ttaagaaatc
     1921 tataaaaagc aattatcaaa gagaatataa ctttattttt ataatagttg gtttatcaac
     1981 tattatagga ataattctaa ctattttatc ctcattttta ttgctaaact atttagttag
     2041 cattgatgca a
//
LOCUS       DANMCL010000169         1881 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.174, whole genome shotgun sequence.
ACCESSION   DANMCL010000169 DANMCL010000000
VERSION     DANMCL010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.174"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..588
                     /locus_tag="PXF40_002690"
     CDS             <1..588
                     /locus_tag="PXF40_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HDL5803962.1"
                     /translation="SDLDYIKAEAQGELVAVVHSHPEPNGKPVLSTLDRKMQVQTGLD
                     WWLVHNQKIHKFRNVPHLIGREFKHGTMDCYTLYRDAYMLAGYEMDEFERQDDWWHTG
                     QNLYLDNIQGQGFERVETPQIGDVILMQVGADVPNHAAIYIGDQMVVHHSPNRLSKRD
                     LYDGYWLRHTHSIWRHKLAEKLDFDGILNDIAVNN"
     gene            857..1486
                     /locus_tag="PXF40_002691"
     CDS             857..1486
                     /locus_tag="PXF40_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5803963.1"
                     /translation="MITVKFYGHLKTFGTDFKILVKDIAEAIRALCSQLKGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVVKGAKSGGIFQAVLGVALIGAA
                     FALGPIGLGLVGSATAMTVGAMGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSN
                     LNNLVAQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            1496..>1881
                     /locus_tag="PXF40_002692"
     CDS             1496..>1881
                     /locus_tag="PXF40_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803964.1"
                     /translation="MRIYGAKGGGGSSHTPIEAPETGRSKQIVNIVELLCEGEIEGLV
                     DGFKSIYLDGTQIQNDDGTYNFNNVSGQLNVGTQDQDVLDGYDSSQNEVNVGVEIKKK
                     NGAIVRTVTDERINRLRLTLGVRSLF"
BASE COUNT          569 a          364 c          454 g          494 t
ORIGIN      
        1 tctgatcttg attacatcaa agcagaagca caaggcgagc tggtggcggt agttcattca
       61 caccctgagc caaacggcaa gccggtactc tctacccttg atcgcaaaat gcaagtacag
      121 accggtttag attggtggct ggtacataat caaaaaatcc ataaattcag gaatgtgccg
      181 catttaatcg ggcgtgagtt taaacacggt acaatggatt gttacacgct ctaccgtgat
      241 gcctatatgc ttgccggtta cgagatggac gagttcgagc gacaagatga ctggtggcat
      301 accgggcaaa atctctattt ggataatatt caagggcaag gctttgagcg agtggaaacc
      361 ccacaaatcg gcgatgtgat tttaatgcaa gtaggtgctg atgtgccgaa ccacgctgcc
      421 atttacattg gcgatcagat ggtagtccat catagcccca accgattatc taagcgtgat
      481 ttatacgacg gctactggtt acgccatacc cacagtattt ggcggcataa actggcggag
      541 aagttagatt ttgatggcat attgaatgat attgctgtaa ataactaaca aaaaatgacc
      601 gcttgtaaca aaaacaaacc ccgaagcgtt tgcagcactt cggggttttt catatccact
      661 tacctaacta agaggacata aattaaatga atgataaacg atttacattc aaatttctag
      721 gagttcttat ggaagcaata aatattaccc caaaagaaat cagaaaaaca atgtggacag
      781 ccgcaataat tctctttttg tttgcgttca tctggaaagc ccctgaattt atcactgcta
      841 ttcgttggtg gtaactatga ttacagttaa attttacgga caccttaaaa cattcggcac
      901 agattttaaa attttagtta aagacatcgc tgaggcaatt cgtgctctgt gttcacagct
      961 taaaggattg cgtgaagcgt tgcgagacgg tgtttataaa gtccgtatcg gtaagcagta
     1021 tttagaccca tcagcccttg aaaaagggct tttttattgc ctgaagaaag ggcaaaccat
     1081 tcattttacc cctgttgtca aaggagcgaa aagcggtggt atttttcaag cggtgttagg
     1141 tgtggcgtta attggggctg catttgcgtt aggtcctatc ggcttaggat tggttggctc
     1201 tgctacagca atgacagttg gagcaatggg ggcatcaatg ttactaggag gagtttccca
     1261 aatgctcacc aaaatgccaa aagcccccac aatgggtaat gaaacagaaa aagaaagctc
     1321 aacggctttt tcaaatttaa ataacttggt ggctcaaggc aaacctgtgc cgttggctta
     1381 tggtttgatt cgtaccggct cgctggtgat atcgcaggga gttgagacga tcaccattaa
     1441 agaaaaccaa ccggcaagca acaagaaaac cggctttaga aaataaggga taattatgcg
     1501 tatttacgga gcaaaaggtg gtggcggcag tagccatacc ccgattgaag caccggaaac
     1561 cggtcgctca aaacagattg tgaatattgt ggaattgctg tgcgagggcg aaattgaagg
     1621 cttggttgat ggctttaaat cgatttacct agacggcacg cagatccaaa acgatgacgg
     1681 cacctataat tttaataatg tgagcggtca gctaaatgtc ggtacgcaag atcaagatgt
     1741 gttggacggt tacgatagct cacagaatga agtgaatgtg ggtgttgaga ttaagaaaaa
     1801 gaatggggct attgtccgca ccgtaactga tgaacgaatt aaccgcttgc gtttaacgtt
     1861 gggagtaagg tcattattcc a
//
LOCUS       DANMCL010000170         1869 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.175, whole genome shotgun sequence.
ACCESSION   DANMCL010000170 DANMCL010000000
VERSION     DANMCL010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.175"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..246
                     /locus_tag="PXF40_002693"
     CDS             <1..246
                     /locus_tag="PXF40_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4852 domain-containing protein"
                     /protein_id="HDL5803965.1"
                     /translation="KINLYVSNPEFIDGIPMGKDKAKEFLQKRKNSLGNINRSVILYV
                     DVQFEKAEGLDNLTGKVLSYSVKDNKDKVIYSSRQKQ"
     gene            270..650
                     /locus_tag="PXF40_002694"
     CDS             270..650
                     /locus_tag="PXF40_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803966.1"
                     /translation="MKFIDFGKQLAKPVKFIKQRTAFLPKPLQQAVVFAVIFAGLPLF
                     LVGFTVLRILNGTPVEDISTNDVAYNPNHVENTVNEIEDDSEDSKPEDLWDVIADQDE
                     NQLDGYRDGYFGYGLYQGGYFVKR"
     gene            complement(703..>1869)
                     /locus_tag="PXF40_002695"
     CDS             complement(703..>1869)
                     /locus_tag="PXF40_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HDL5803967.1"
                     /translation="QMNSELGNQQARVPLWWGLFHQINKGVTHALTASIPCKPDLRQV
                     RFEVQHEKINNPALLTEVRLFVQQCYVPARQKIQSSQLSLTPAQVRETSWLGGRILLT
                     NSELYPRYRAQQPHSLFPYNASRDNGLPNNGEGGFPNCAEWWDTANTGLKDRLLADVK
                     QNFSAKVIDFFSSKENADESILRTVLRAENMDISRGKVYPGYGGNLDPTFANATTRLT
                     SSVGSLAASFAAFPAFDAMRQALPMVHAFMLMAVIIITPLVIVMSGYSLKTLVTLTFV
                     SFALVSLTFWWELARWLDSWLLSALYDSSAHSRINPYFLENTQDDFIVNFVMGSMFLV
                     LPAIWLGSMSWAGVKIGDIAAGFTTDSLDSKSAGSQGGNLVKKGGKEISAGFNK"
BASE COUNT          603 a          367 c          353 g          546 t
ORIGIN      
        1 aaaattaatc tgtatgtttc taatcccgag tttattgacg gtatacctat gggcaaggat
       61 aaagctaaag agtttttaca gaagcgtaaa aattctttgg gaaacataaa tcgctctgtt
      121 atattgtatg ttgatgtaca atttgaaaaa gcagaaggat tagataattt aacaggaaaa
      181 gttttatctt attctgtaaa agacaataaa gataaagtaa tttatagtag tcgccaaaaa
      241 caataacctt ttatcttagg aaagatacta tgaaatttat cgatttcgga aagcagctcg
      301 ctaagccggt taaatttatc aaacaacgta ccgcattttt accaaaaccg ctacaacaag
      361 ctgtcgtttt tgcggtgatt tttgcaggac ttcccttgtt tttagttgga ttcacggttc
      421 tgcgaattct caatggaaca ccagtagaag atatttcaac aaatgacgta gcatataatc
      481 caaaccacgt cgaaaacacg gttaatgaaa ttgaagatga tagtgaggat agtaagccgg
      541 aagatttatg ggatgtaatt gctgatcaag acgaaaatca gcttgatgga tatcgtgatg
      601 gatattttgg atatggactc tatcagggtg gctattttgt aaaaagatga gaaaatatga
      661 ttagaaatta ataaggtaga gattaacctc taccttattg ttttatttgt taaaccctgc
      721 agatatttcc ttaccgcctt tcttaactaa attaccacct tgagagcctg cggatttact
      781 atctaatgaa tcagtagtaa aaccggcagc tatatctcct atttttactc cagcccacga
      841 catactgcct agccaaatcg ccggtaaaac caagaacatc gaacccatca caaaattgac
      901 gataaaatca tcttgcgtat tttcaaggaa atacggattt attcgactat gtgcactgga
      961 atcatataga gcggatagta gccaagaatc taaccatctt gctaattccc accagaatgt
     1021 cagtgatacc aaagcaaaac tcacaaaagt taatgtaact aatgttttga gagaataacc
     1081 actcatcaca ataaccagcg gagtaatgat gatcacagcc atcaacataa aagcatgtac
     1141 catcggcagt gcttgtcgca ttgcatcgaa tgctggaaag gctgcaaagc tggcagctaa
     1201 gcttcccact gaagatgtta atcgagtcgt tgcatttgca aatgtaggat ctaaattccc
     1261 cccatacccg ggataaactt tccctctcga aatatccata ttctctgctc gtaatacagt
     1321 acggagtatg gattcatccg cattttcttt gctgctaaaa aaatcaatca cttttgcaga
     1381 gaagttctgt ttgacatcag ctaataaacg atcttttaaa ccagtattcg ccgtatccca
     1441 ccactctgca caatttggaa aaccaccttc cccattattc ggcaatccat tatcccggga
     1501 agcattgtag ggaaatagac tatgaggttg ttgagctcga taacggggat aaagctcact
     1561 gtttgtcaaa agaatacgac cacctaacca gctggtttca cgcacctgtg ccggagtcaa
     1621 tgagagctga ctgctttgaa ttttctgacg tgcaggtaca taacattgtt gtacaaataa
     1681 gcgaacctca gtcaataatg caggattatt gattttttca tgttggacct caaagcgaac
     1741 ttgacgtaaa tccggtttac acggaattga agctgttaat gcgtgtgtaa ctcctttgtt
     1801 gatttgatgg aataatcccc accaaagcgg tactctcgct tgctggttgc ccaattcaga
     1861 gttcatttg
//
LOCUS       DANMCL010000171         1779 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.176, whole genome shotgun sequence.
ACCESSION   DANMCL010000171 DANMCL010000000
VERSION     DANMCL010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1779
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.176"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..493
                     /locus_tag="PXF40_002696"
     CDS             <1..493
                     /locus_tag="PXF40_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803968.1"
                     /translation="ARPLNTLEVKGLTVVDDSQKPLFSEVNQALYHGLSPIEVVASRV
                     QITRAITTYTKNVTNTDDPSYLDLTTIRTLDYVRKAIQTRQRLRFPRAKNSHRIVAKV
                     RSEILDVLYQLEGEEVIENVEAWKNRLLVVRNQDPTYLDLEIPADVVNGLHVIRNKIT
                     LIL"
     gene            504..878
                     /locus_tag="PXF40_002697"
     CDS             504..878
                     /locus_tag="PXF40_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803969.1"
                     /translation="MSIVYEGSCVLEVDGVEIEITKLDVKTVTGRKLVKTMNSSGRAR
                     GYSQGIAEYTLSVTAVEPQDGSVIDWDNIKNAKLTKYPLDNSEKRTSYLGCFTTDVSE
                     SYTVDGESVRDIQLNALRKVNE"
     gene            878..1246
                     /locus_tag="PXF40_002698"
     CDS             878..1246
                     /locus_tag="PXF40_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803970.1"
                     /translation="MKITLNLGIEYNGKIRRDCTVRLLTMGGQCTAQEMIADLGFEEN
                     SEALSKREQTLVDMAYLSQQVTFDGIYQGNVTAQFLFDNLATEDYWQLIEATLTLRKK
                     RLENGVSQSESESPANPDLA"
     gene            1276..1464
                     /locus_tag="PXF40_002699"
     CDS             1276..1464
                     /locus_tag="PXF40_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803971.1"
                     /translation="MILLSKFAITAEQVWQMPLLEVFAWIESYLESEGVKTPHSPMGA
                     NSEVKRESYVFTRCGKIE"
     gene            1517..>1779
                     /locus_tag="PXF40_002700"
     CDS             1517..>1779
                     /locus_tag="PXF40_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803972.1"
                     /translation="MAKNMKVQLELTAKDTASPVLNQAAKTAEKAFKNTERAAQKSGN
                     AQTQAAQKAANATESSNRKIEQSYRNARRVAADVSRARETLGVR"
BASE COUNT          540 a          352 c          447 g          440 t
ORIGIN      
        1 ggctcgcccg ttaaataccc ttgaagttaa aggcttaacg gtcgtagatg actcgcagaa
       61 accgttattt agcgaagtaa accaagcgtt atatcacggt ttaagcccga ttgaggtggt
      121 ggcaagccgt gtgcagatta cccgtgcgat tactacatac accaaaaacg tgacgaatac
      181 tgatgaccca agctatttgg atttaaccac cattcgtacg cttgactatg tgcgtaaggc
      241 aatccaaacc cgtcagcgtt tgcgtttccc tcgtgcgaaa aactcccacc gtattgtggc
      301 aaaagtacgc tcggagattt tagatgtgct ttatcagctt gagggcgaag aggtaatcga
      361 aaatgtggaa gcgtggaaaa atcgcttatt agtggtgcgt aatcaagacc cgacttactt
      421 ggatttagaa atccctgcgg atgtggttaa tggcttgcac gttattcgta acaaaattac
      481 gttaatttta tagggggtgc tagatgtcaa ttgtttatga aggctcttgc gtgcttgagg
      541 tagatggcgt tgagattgaa attaccaaac ttgatgtaaa aaccgtaacc ggtcgcaagc
      601 tggttaaaac gatgaacagt tccggacgtg caagaggtta ttcgcaaggc attgcggaat
      661 atactctctc ggtgactgca gttgagcctc aagacggttc ggtaattgat tgggataaca
      721 ttaaaaatgc gaagctcact aaatacccgt tagacaatag cgaaaaacgc acctcttatt
      781 taggctgttt tactaccgat gtgagcgagt cttacaccgt tgatggtgag tcggtgcgtg
      841 atattcaact caacgcattg cgtaaggtga atgaataatg aaaatcactt taaatcttgg
      901 cattgaatat aacgggaaaa ttcgccgtga ttgtacggtg cgattgctga cgatgggcgg
      961 tcaatgcacg gctcaagaaa tgattgcgga tttagggttt gaggaaaact cggaagccct
     1021 atcaaagcgt gaacaaacct tggtcgatat ggcttacctt tcgcagcaag ttacctttga
     1081 tggtatttat caaggtaatg tgacggctca atttttattt gacaatttag ctaccgaaga
     1141 ctactggcag ttgattgagg caacgctcac actccgaaaa aagcggttag aaaatggggt
     1201 gagccaaagc gagagcgaaa gcccggcaaa tcccgatttg gcgtagcaga agcctttaag
     1261 cagtaccgac aagcggtgat tttactctca aaatttgcaa ttaccgccga gcaggtatgg
     1321 caaatgccgt tgcttgaggt atttgcgtgg attgagagct acttggagag tgagggcgta
     1381 aaaacaccgc atagcccaat gggtgcgaat agcgaagtga aacgcgaaag ctatgtcttt
     1441 actcggtgtg gcaaaattga ataggggcga aagccccttt tttgtacttt aaaatgagtt
     1501 taaagagact ttaaaaatgg caaaaaatat gaaagtgcaa ctggaattga cggcaaaaga
     1561 tactgcctcc ccagttttaa accaagccgc taaaaccgcc gaaaaagcct ttaaaaatac
     1621 agagcgagcg gcacaaaaaa gtggcaatgc tcaaacgcaa gcagcacaga aagcagcgaa
     1681 tgctacagaa agctcaaatc ggaaaataga acagagttac cgtaatgccc gccgagtggc
     1741 tgccgatgtg agccgagccc gtgaaacatt aggtgttcg
//
LOCUS       DANMCL010000172         1738 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.177, whole genome shotgun sequence.
ACCESSION   DANMCL010000172 DANMCL010000000
VERSION     DANMCL010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.177"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>1738
                     /locus_tag="PXF40_002701"
     rRNA            <1..>1738
                     /locus_tag="PXF40_002701"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          520 a          336 c          518 g          364 t
ORIGIN      
        1 gcgaagaagg acgtgctaat ctgcgaaaag cttggatgag tcgataagag gcgtttaatc
       61 caagatgtcc gaatggggaa acccagtagg tgaagaacct actatcaccc agtgaataca
      121 tagctgtgtg aggcaaaccg ggagaactga aacatctaag taccccgagg aaaagaaatc
      181 aaccgagatt tcgttagtag cggcgagcga acgcgaaaga gccagttagt gatagcagta
      241 aagttagggg aatgttctgg gaaggacaat cgtagagggt gataatcccg taccttaaaa
      301 ctccattgtg gtactaggct aacaacaagt agggcgggac acgtgatatc ctgtttgaag
      361 atggggggac catcctccaa ggctaaatac tcctgattga ccgatagtga accagtactg
      421 tgaaggaaag gtgaaaagaa ccccggcgag gggagtgaaa tagaacctga aaccttgtgc
      481 gtacaagcag tgggagcaag agtaatcttg tgactgcgta ccttttgtat aatgggtcag
      541 cgacttatat tttgtagcaa ggttaactga ataagggagc cgtagggaaa ccgagtctta
      601 actgggcgtg tagttgcaag gtatagaccc gaaacccggt gatctagcca tgggcaggtt
      661 gaaggttggg taacactaac tggaggaccg aaccgactaa tgttgaaaaa ttagcggatg
      721 acttgtggct gggggtgaaa ggccaatcaa accgggagat agctggttct ccccgaaatc
      781 tatttaggta gagccttgag cggacacctt cgggggtaga gcactgtttc ggctaggggt
      841 ccatcccgga ttaccaaccc gatgcaaact gcgaataccg aagagtgata ctcaggagac
      901 acacggtggg tgctaacgtc catcgtggag agggaaacaa cccagaccgc cagctaaggt
      961 cccaaagtct atattaagtg ggaaacgaag tgggaaggct tagacagcta ggatgttggc
     1021 ttagaagcag ccaccattta aagaaagcgt aatagctcac tagtcgagtc ggcctgcgcg
     1081 gaagatgtaa cggggctcaa atatagcacc gaagctgcgg catcagacga aagtctgttg
     1141 ggtaggggag cgttgtgtaa gtcgatgaag gtggattgag aagtctgctg gagatatcac
     1201 aagtgcgaat gctgacataa gtaacgataa aacgagtgaa aaactcgttc gccggaagac
     1261 caagggttcc tgtccaacgt taatcggggc agggtgagtc ggcccctaag gcgaggctga
     1321 aaagcgtagt cgatgggaaa cgggttaata ttcccgtact tgtaataact gcgatgtggg
     1381 gacggagaag gttaggttag cagactgttg gatgtctgtt taagccggta ggtgggaaga
     1441 ttaggcaaat ccggtcttcc ttaacaccga gaagtgatga cgagtctcta cggagatgaa
     1501 gtaatcgata ccacgcttcc aggaaaagcc actaagcttc aggttattat aaaccgtact
     1561 ataaaccgac acaggtggtc aggtagagaa tactcaggcg cttgagagaa ctcgggtgaa
     1621 ggaactaggc aaaatagcac cgtaacttcg ggagaaggtg cgccggcgta gattgtagtc
     1681 ccttgcggat gaaggttgaa ccggtcgaag ataccagctg gctgcaactg tttattaa
//
LOCUS       DANMCL010000173         1698 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.178, whole genome shotgun sequence.
ACCESSION   DANMCL010000173 DANMCL010000000
VERSION     DANMCL010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1698)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.178"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(25..1564)
                     /locus_tag="PXF40_002702"
     rRNA            complement(25..1564)
                     /locus_tag="PXF40_002702"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          393 a          512 c          341 g          452 t
ORIGIN      
        1 acttgctgtc gttctcgatt ttggtaagga ggtgatccaa ccgcaggttc ccctacggtt
       61 accttgttac gacttcaccc cagtcatgaa tcataccgtg gtaaacgccc ccctttcggt
      121 taagctatct acttctggta caacccactc ccatggtgtg acgggcggtg tgtacaaggc
      181 ccgggaacgt attcaccgca acattctgat ttgcgattac tagcgattcc gacttcatgg
      241 agtcgagttg cagactccaa tccggactta gacgtacttt ctgagattcg ctccccatcg
      301 ctggctcgcc gccctctgta tacgccattg tagcacgtgt gtagccctac tcgtaagggc
      361 catgatgact tgacgtcatc cccaccttcc tccggtttat caccggcagt ctcctttgag
      421 ttcccgacct aatcgctggc aacaaaggat aagggttgcg ctcgttgcgg gacttaaccc
      481 aacatttcac aacacgagct gacgacagcc atgcagcacc tgtctcatgg ttcccgaagg
      541 cactctcata tctctacaag attccatgga tgtcaagagt aggtaaggtt cttcgcgttg
      601 catcgaatta aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc atttgagttt
      661 taaccttgcg gccgtactcc ccaggcggtc gatttatcac gttagctacg ggcaccagag
      721 ttaaacccca atccccaaat cgacagcgtt tacggcgtgg actaccaggg tatctaatcc
      781 tgtttgctcc ccacgctttc gcacatgagc gtcagtacat tcccaagggg ctgccttcgc
      841 cttcggtatt cctccacatc tctacgcatt tcaccgctac acgtggaatt ctacccctcc
      901 ctaaagtact ctagttgtcc agtctgaaat gcaattccca ggttaagccc ggggctttca
      961 cacctcactt aaacaaccgc ctgcgtgccc tttacgccca gttattccga ttaacgctcg
     1021 caccccccgt attaccgcgg ctgctggcac ggagttagcc ggtgcttctt ctgtgattaa
     1081 cgtcaatcga ctgttctatt aaaacaatcg ccttcctcgt caccgaaaga actttacaac
     1141 ccgaaggcct tcttcattca cgcggcatgg ctgcatcagg gttcccccca ttgtgcaata
     1201 ttccccactg ctgcctcccg taggagtctg gaccgtgtct cagttccagt gtggctggtc
     1261 atcctctcag accagctaga gatcgcgggc ttggtgagcc tttacctcac caactaccta
     1321 atcccacttg ggctcatctt atggcaggtg gccaaatggt cccacccttt agtcctaaga
     1381 cattacgcgg tattagctac cgtttccagt agttatcccc ctccataagc cagattccca
     1441 agcattactc acccgtccgc cactcgtcac ccaaggagca aactcctatg tgctaccgtt
     1501 cgacttgcat gtgttaagcc tgccgccagc gttcaatctg agccatgatc aaactcttca
     1561 attcaaaaag tttaatcgct caatactgct gacataaaat cgcacttcca aatttaaacc
     1621 taattaaaat taagttaaaa gaaagtaatg aatttctagt tagcacctat taagacttca
     1681 aaattaaaaa aatgtttt
//
LOCUS       DANMCL010000174         1659 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.179, whole genome shotgun sequence.
ACCESSION   DANMCL010000174 DANMCL010000000
VERSION     DANMCL010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1659)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1659)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.179"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1375
                     /locus_tag="PXF40_002703"
     CDS             <1..1375
                     /locus_tag="PXF40_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase/relaxase domain-containing protein"
                     /protein_id="HDL5803973.1"
                     /translation="LIPKSAFDWLGQYPEVISSLMYAMSGHNDKAGLLSEIVQKADQH
                     SVTLAIGGDVNKLVQRPVNSLPKQIVLALRYLLEQKIKLNTPKGPADGWFTEDGLWLV
                     SKTAADNIRTYLLGQGISVPKDNPKLFDEMQSLGIVEESPSGGAIWSCRIQADSGWTP
                     ATTFTLLRVKPEVAWENINDRPAYFAGKVKVIEQITEEVNAEVQPPLVEETTKISLLP
                     SKQSEAIIPSEETEISKAITSSDNATSAEVIINNENDLTSFVLDMFAPTETIEQNISV
                     ISSNKEQQIVMTTLTEQEKVPPKKVKLEKSKKKNLQLTTLEPWNDMINPITGKEFVNW
                     LKEGIATNKFAINKPSAKLHIVDGNLFLVTPVIFEMYLQECGQPYDKETINNLQYDFQ
                     GLGLHSLKKTMTNGKPDTINFWKCDVIGPRKTSSLTGYLIKNTHLLFGDKMLLNNHCL
                     TLQEEDT"
     gene            1415..>1659
                     /locus_tag="PXF40_002704"
     CDS             1415..>1659
                     /locus_tag="PXF40_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage integrase SAM-like domain-containing
                     protein"
                     /protein_id="HDL5803974.1"
                     /translation="MFFYRHYLRADTKRSYNNIIRIIKKRYPNLNANDVTTDMLIEWR
                     NQVVGNTIKAVTWNNYVRHLKALYNFAIAQGLLCMSS"
BASE COUNT          560 a          281 c          344 g          474 t
ORIGIN      
        1 gctcattccc aagtctgcgt ttgattggct gggacagtat ccagaagtca tttcttcact
       61 gatgtatgca atgtctgggc ataacgataa agccgggctt ttatctgaga tcgtgcagaa
      121 agccgatcag catagtgtta cgctagcaat cggtggcgat gtgaataagc tggtacagcg
      181 accagttaat tcattgccga agcaaattgt gctggctcta cgttatttac tggagcagaa
      241 aatcaaatta aatacgccaa aaggaccagc agacggctgg tttaccgaag atgggctgtg
      301 gctggtaagt aaaactgctg ccgataatat ccgaacttat ttactgggac aggggatttc
      361 cgtgcctaaa gataatccaa aactgtttga tgaaatgcaa tctcttggta ttgtggaaga
      421 gtctccttcc ggcggtgcaa tttggagctg ccgtatccaa gccgattccg gttggacacc
      481 ggcgacaaca tttacgctat tacgagttaa accggaggtt gcttgggaga atatcaacga
      541 tagaccggcg tattttgccg gaaaagtcaa agtgattgaa cagataactg aagaggtcaa
      601 tgcagaggtt cagcctccat tagttgaaga aaccactaaa atttctctat taccgagcaa
      661 gcaatcggag gctattattc cgtctgagga aacggaaata tcgaaggcaa ttacaagttc
      721 agacaatgca acatctgcgg aagtaatcat aaataatgaa aatgatttaa cttcttttgt
      781 attggatatg tttgctccta cagagacaat tgagcaaaat atttctgtca tttcttcaaa
      841 taaagagcag caaatcgtaa tgacaacact tacggaacaa gaaaaagttc cgccgaaaaa
      901 agttaaatta gagaaaagta agaaaaaaaa tcttcaatta accactctag aaccatggaa
      961 tgatatgatt aatccaatta ctggaaaaga attcgtaaat tggttgaagg aggggatagc
     1021 aaccaataaa tttgcaatta acaaaccttc tgcaaaatta catatagtag atggtaattt
     1081 atttttagtc acaccagtta tttttgaaat gtatttgcaa gaatgtggcc aaccttatga
     1141 taaggaaact ataaacaatc ttcagtatga tttccagggg cttggtcttc attctcttaa
     1201 aaaaaccatg actaatggta agccagatac aataaatttt tggaagtgtg acgtgattgg
     1261 tcctagaaag acttcctctt taacaggata tttgataaaa aatactcatc tcttatttgg
     1321 ggataaaatg ttactaaata accactgttt aactttacag gaagaggaca cataatatgg
     1381 attctaagat ttccttcgat atattattgg aacgattttt ttctatcgtc attatttacg
     1441 ggcggacacg aaacgaagtt ataacaatat tattcgaatt atcaaaaagc gttatccaaa
     1501 cttaaatgcg aatgatgtga ctactgatat gttaattgaa tggcgtaatc aagttgttgg
     1561 taatacaatt aaagctgtga cgtggaataa ttatgtgaga cacctaaaag cattatataa
     1621 ttttgcgata gcacaggggc tactttgcat gagtagtaa
//
LOCUS       DANMCL010000175         1595 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.180, whole genome shotgun sequence.
ACCESSION   DANMCL010000175 DANMCL010000000
VERSION     DANMCL010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1595
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.180"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..661
                     /locus_tag="PXF40_002705"
     CDS             <1..661
                     /locus_tag="PXF40_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL5803975.1"
                     /translation="SLYGYSYYDCDSSRGLAEYNKGRFLKLRDDFNAKVLAGEIDYPM
                     LYVLMVFSFNNQIRFNRKGLFNLPVGKRDFNSKMRSKLVLFSEELKSKDVQFMKKDYR
                     EISLDDFSQETFIYCDPPYLITNATYNEHGMWTEIEEKALLEFLDEANEKGFSFALSN
                     VLESKNKRNDILYNWIESKGYYCNYLNKSYSNSNYHRKDKVSISEEVLITNYPVNWRN
                     K"
     gene            662..>1595
                     /locus_tag="PXF40_002706"
     CDS             662..>1595
                     /locus_tag="PXF40_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5803976.1"
                     /translation="MSNKSIPYQSFCWVIGTTSFRTAKLNLKIEAQLLLLDEFFNEVI
                     KESSWNWNNELQEKYYDFMKDRAFLTGEAKRKDKDAREKTSGLVDIGLITEDRLITDA
                     GRELLKVTSSGDFETNNVFNINRDSFIYLKQLLKTSIDVSGSIVRPFIAVVKCLTELE
                     FLSYDEFTYFVPLIRDDESAKQIISDIKLYREGKILPEEIIYKRLMQMENYKLAQEEF
                     IASDVDENLICLVGMNRKSRNYDKPYYKLYENLKKVFLDGENIYESLLNSAKNINQKP
                     GILWRSLLFKTTNIGVVRKNGKSSIHKQCPFINCK"
BASE COUNT          612 a          169 c          303 g          511 t
ORIGIN      
        1 atcattatat gggtattctt attatgattg tgatagtagt agaggcttag ccgaatacaa
       61 taaaggaaga tttctcaagt taagagatga ttttaacgct aaagttcttg ctggagaaat
      121 agattatcca atgctttatg tacttatggt gttctctttt aataatcaga ttaggtttaa
      181 tagaaaggga ctttttaatc ttccggtagg taagagagat tttaattcca aaatgagaag
      241 taaacttgta ttattttctg aagaattaaa aagtaaagat gtccagttta tgaaaaagga
      301 ttatagagaa atttcgttag atgatttttc tcaggagact tttatttatt gtgatccacc
      361 ttatttgatt acaaatgcaa catataatga acatggaatg tggactgaaa tagaagaaaa
      421 agctttactt gaatttttgg acgaagccaa tgaaaaaggt tttagttttg ctttgtctaa
      481 tgttttggaa agtaaaaata aaagaaatga tattttatat aattggattg aaagcaaagg
      541 atattattgc aattacttaa ataaaagtta ttcaaatagt aactatcata gaaaagataa
      601 agtcagtata tctgaagaag ttttaattac taactatcct gtgaattgga ggaataagta
      661 aatgtctaat aaaagtattc catatcaaag tttttgttgg gttataggaa ctacaagttt
      721 tagaactgca aaactaaatt taaaaatcga ggcacagttg ttgcttcttg atgagttttt
      781 taatgaggtc ataaaggaat caagttggaa ctggaacaat gaattgcaag aaaaatatta
      841 tgattttatg aaagatagag ctttcctaac aggagaagca aaaagaaaag acaaagatgc
      901 cagagaaaaa acatcaggat tggttgatat tggtttaatt acagaagata gattgattac
      961 ggatgcagga agagaactcc ttaaagtaac aagtagtggg gattttgaaa ccaataatgt
     1021 gtttaatatt aatagagata gctttatcta tctaaaacag cttcttaaaa cgagtataga
     1081 tgtaagtggt agtatcgtta gaccgtttat tgcggttgta aagtgcctga cggaacttga
     1141 gtttttaagt tatgacgagt ttacttattt tgttccgcta attagagatg acgaaagtgc
     1201 aaaacaaatc atatcggata ttaaattata tcgagaaggt aaaattttac cggaagaaat
     1261 aatttataag aggcttatgc aaatggaaaa ctacaaactt gcacaagaag aatttatagc
     1321 ctctgatgtt gatgaaaatc taatatgttt agtgggaatg aatcgtaaaa gcagaaacta
     1381 tgacaagccg tactataaat tgtatgagaa tttaaagaag gtatttcttg atggcgaaaa
     1441 catttatgaa tcgctattaa attctgcaaa gaatataaat caaaaacctg gaatattgtg
     1501 gagaagttta ctctttaaaa caaccaatat tggtgttgta agaaaaaatg ggaagtcttc
     1561 aattcacaaa caatgcccat ttataaactg taaaa
//
LOCUS       DANMCL010000176         1571 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.181, whole genome shotgun sequence.
ACCESSION   DANMCL010000176 DANMCL010000000
VERSION     DANMCL010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1571)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1571)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1571
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.181"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..154
                     /locus_tag="PXF40_002707"
     CDS             <1..154
                     /locus_tag="PXF40_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803977.1"
                     /translation="ARIEKEQPLEKTLILYSEQLASFEQKSPMALHREKFEAKPTGLA
                     ELINNL"
     gene            165..1115
                     /locus_tag="PXF40_002708"
     CDS             165..1115
                     /locus_tag="PXF40_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HDL5803978.1"
                     /translation="MSLSTFAHALKLDKQGNVILFDDSPEEQAKLISRLKQNRLFKLL
                     NLVQTKHAKGEAIGLFTPIAGTTNTESGEEREPKQALAPAQKYHCEQINIDSYIRYEK
                     IDAYNLENSLEERLNQLLDDNLLRGLLMVGWQGVSRADTSNATNNQLAQDVKKGWLQK
                     IREGKPEAVINGATIGKEQQYKSLNALIKQGLGKISPAYAMGGDMIAICGRDIIADDV
                     IQLEHNDLSENLADLLTLCQQAKGGLKAVSIPYFPSNAILITRLDNLSLYLHLNNIRR
                     KAFDTPQKDSVETFYSLNVDYIVEDFNACCLIENIEVIEE"
     gene            1112..1306
                     /locus_tag="PXF40_002709"
     CDS             1112..1306
                     /locus_tag="PXF40_002709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803979.1"
                     /translation="MSLESYIQQAEEMELLEKLDFVSDLLELEKVSEIEAYRILTAHG
                     EPKPQPAQEKLIGCVDFLDD"
BASE COUNT          581 a          319 c          299 g          372 t
ORIGIN      
        1 ggctagaatt gaaaaggaac agccacttga aaaaacatta attctttatt ctgaacagtt
       61 agcaagtttt gaacaaaaat cgccaatggc attacaccgt gaaaaatttg aagcaaaacc
      121 taccggctta gctgaattaa ttaataactt ataagaggta aaaaatgagt ttatccactt
      181 tcgcccacgc attaaaacta gataaacaag gtaacgttat tttatttgac gatagccccg
      241 aagaacaggc aaaactaatt agccgcttaa aacaaaatcg cctttttaaa ttattgaatt
      301 tagtgcaaac caagcacgca aagggcgaag cgattgggct attcacaccg atagccggca
      361 caaccaacac cgaaagcgga gaggaacgag agccaaaaca agcccttgca cccgctcaaa
      421 aataccactg cgaacaaatc aacattgata gctatattcg ctatgaaaaa atcgatgctt
      481 acaacctcga aaacagctta gaagaacgct taaatcagtt acttgatgac aaccttctaa
      541 gagggctttt aatggttggc tggcaaggcg taagccgtgc agatacatca aacgcgacaa
      601 acaaccaact cgcccaagac gtgaaaaaag gctggctaca aaaaatcaga gagggcaagc
      661 ccgaagcggt aattaatgga gcaaccatag gcaaagagca acaatacaaa agcctaaatg
      721 ctctgattaa gcagggatta ggcaaaatta gcccagcgta tgcaatgggc ggagatatga
      781 tcgccatttg tgggcgggat attatcgctg atgatgtaat tcagcttgaa cacaacgatt
      841 taagcgaaaa cctagccgac ttattaacct tatgccaaca agctaaaggc ggactaaaag
      901 cggtaagtat tccctacttc ccaagcaatg cgattttaat cactcgatta gataaccttt
      961 cgctatatct tcatttaaac aatatccgcc gtaaagcgtt tgatacgcca caaaaagaca
     1021 gcgtagagac attttactcc ctcaatgtgg attacattgt agaagatttt aacgcctgtt
     1081 gtttaattga aaatattgag gttattgaag aatgagccta gaaagctata tccaacaagc
     1141 ggaagaaatg gagcttttag aaaaactcga ttttgtttca gacctgttag aacttgagaa
     1201 agtcagcgaa attgaagcct atcgcatttt aaccgcccac ggcgaaccta aaccccaacc
     1261 ggcacaagaa aagctaatag gttgcgtaga ttttcttgat gactaaccca agccccgaaa
     1321 ggggcttttt gcatttttgc aacaaaaaac gaccgcttgc accctttgaa attattgcta
     1381 tcattaataa aaaacaataa ccaaatcaaa tgagagtaca gcaatgacaa actataaact
     1441 accggctaga aagtggtaca ccttagagca ggcaacaaaa cgcattaaac aactcactgg
     1501 cgaagatata gaaatagaag atttattaca ttattggtat ttaagaaagc tagaattaag
     1561 tatttattta a
//
LOCUS       DANMCL010000177         1359 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.182, whole genome shotgun sequence.
ACCESSION   DANMCL010000177 DANMCL010000000
VERSION     DANMCL010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1359
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.182"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..1017
                     /locus_tag="PXF40_002710"
     CDS             <1..1017
                     /locus_tag="PXF40_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlwI family type II restriction endonuclease"
                     /protein_id="HDL5803980.1"
                     /translation="YLHVFKAMATLSDYFDLNRRYFNITDTLIFEDRMIKLDMIPKYY
                     FKEIIDVLYTETFSRDNNLRADAPLETISEAFKLDISKVYVALSKDLGITIKSPEQAA
                     TYVNDERYRRFNTLIDKKFNDSVLIELLNCFEKRDDKRIEELVTDEAAIPTIFEYILG
                     IIWYKVSERQGNILDFMKLSLEANLLPKTHAAGGYADIIYEYEACTSYPKHSLLLEAT
                     LADGNNQRRMEMEPVSRHLGDYRIRFNNPFDYSLFVSTYLDKNVISDFRYRKIIPYTR
                     DEETITGMKIISMDTDSLKKIIENKVKYKYLYEIFDKYHEMPLETVDWHDGMIKEATG
                     EYKS"
     gene            1079..>1359
                     /locus_tag="PXF40_002711"
     CDS             1079..>1359
                     /locus_tag="PXF40_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIR domain-containing protein"
                     /protein_id="HDL5803981.1"
                     /translation="MKNRIEHPKIFISYAWGSQEHDEKVIALATNLKGDGIDVIFDKW
                     QLKEGNDTFKFMEKSVLDESITNVLILIDPIYAKKANERAGGVGTETQI"
BASE COUNT          509 a          160 c          267 g          423 t
ORIGIN      
        1 tatttacatg tttttaaagc aatggcgact ttatctgatt attttgattt aaatagaaga
       61 tattttaata ttacagatac tctaattttt gaagatcgta tgattaagtt ggatatgatt
      121 ccaaagtatt attttaaaga aattattgat gttctgtata cagaaacttt tagtagagat
      181 aataatctca gggctgatgc cccacttgaa actatatcag aagcattcaa gttagatatt
      241 agcaaagtat atgtagcttt aagtaaagat ttaggaatta caattaagag tccggaacaa
      301 gctgcaactt atgtaaatga tgaacgatac agaagattta atactttgat cgataagaaa
      361 tttaacgatt ctgtgcttat agagttacta aattgttttg agaaacgtga tgataaaagg
      421 attgaagaac ttgttacaga tgaggctgca atacctacta tttttgaata tattttggga
      481 attatatggt acaaagtgag cgaaagacaa ggaaatattt tggatttcat gaagttatca
      541 ttagaagcca atttattgcc gaagacccac gcagctggag gttacgcaga cattatatat
      601 gaatatgaag cgtgcacctc ttatccgaaa cattcattat tgcttgaagc aacccttgca
      661 gatggaaata atcaaagaag aatggaaatg gagcctgttt caagacattt aggcgattat
      721 aggattagat ttaataatcc gtttgattac agcctatttg ttagcacata cttagataaa
      781 aatgtaatct cagattttag atatagaaag ataattccat acaccagaga tgaagaaacc
      841 attacaggaa tgaagattat ttcaatggac acagattctc ttaagaaaat aattgagaat
      901 aaggttaagt acaagtatct gtatgaaata tttgataaat accatgaaat gccattagag
      961 actgtagatt ggcatgatgg gatgataaaa gaggctactg gagagtataa gtcatagtga
     1021 ttataagata gtgagaaaga atacttattt tgaaaggaat acatgggaat tgatacagat
     1081 gaagaataga attgaacatc ctaagatttt tatttcatat gcttggggat cacaggaaca
     1141 tgatgagaag gttattgctt tagctacaaa tcttaaagga gatggtatag atgtcatttt
     1201 tgataaatgg cagctaaaag aaggcaatga tacctttaaa ttcatggaaa aaagtgtttt
     1261 agatgagagt attaccaatg tactgattct tatagatcct atttatgcaa agaaagcaaa
     1321 tgaaagagcc ggtggcgtag gtacagaaac acagattat
//
LOCUS       DANMCL010000178         1334 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.184, whole genome shotgun sequence.
ACCESSION   DANMCL010000178 DANMCL010000000
VERSION     DANMCL010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1334
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.184"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            25..1095
                     /locus_tag="PXF40_002712"
     CDS             25..1095
                     /locus_tag="PXF40_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803982.1"
                     /translation="MKFNKKLILTFAATLVLSACGGSGSGGSSSTPNHPKPVLVPKTQ
                     NNLQAQNVPQAQNASQAQNAPQAQNAPQAQNAPQVENAPQAQNAPQVENAPQAEVTPP
                     VPQPQSQKIDGSFDKIGSVKLNKEAQTLELSRFTLVDKLGTPPKFDKVSGKKIIEEKD
                     FLVLNLSDINAEQLSGDFLIRRSDDLFYGYYHDTNGKNLVDAADKFSQYFVVYDEKRV
                     NDNISDKLTATYRKKEGFVYGSNPHTKEFAARISKLGDVEIKFENGQAQGSIKDEKDG
                     NAEIFTIKGDTKQLEITPTESNRIIIAILDQNQKSYTPGMEKAIMETKFIDSKAGNSD
                     QKYLIGEAKSDNWQAIMVSEKK"
BASE COUNT          480 a          249 c          241 g          364 t
ORIGIN      
        1 tttatatatt taaggaataa ctaagtgaaa ttcaataaaa aattaatttt aacatttgct
       61 gcaaccttag ttttaagtgc ttgcggagga agcggtagcg gaggttcgtc ttcaacaccg
      121 aatcacccca aaccagtact agtaccaaaa acacaaaata atcttcaagc acaaaatgtt
      181 cctcaggcac aaaatgcctc tcaggcacaa aatgcccctc aggcacaaaa tgctcctcag
      241 gcacaaaatg ctcctcaggt ggaaaatgct cctcaggcac aaaatgctcc tcaggtagaa
      301 aatgctcctc aagcagaggt tactccgcct gtaccacagc cacaatcaca aaaaattgac
      361 ggttcttttg ataaaattgg ttcagtaaaa ctcaataaag aggctcaaac tcttgagctt
      421 agtagattca ctttggtgga taaattaggc acaccaccga agtttgataa agtaagcggt
      481 aaaaaaatta ttgaagaaaa agattttctc gtattaaatt tgtctgatat taatgctgaa
      541 caactctctg gcgattttct tattcgccgt agcgatgatc tattctatgg ctactatcac
      601 gatacaaatg gcaaaaatct tgtcgatgct gccgataaat tcagtcaata ttttgtcgtg
      661 tatgatgaga aacgggtaaa tgataatatc tctgataaat taacagcaac ttaccgtaaa
      721 aaagaaggct ttgtatatgg ttcaaatcca catactaaag aatttgccgc acggatcagc
      781 aaattggggg atgtagaaat taaatttgaa aatggtcaag ctcaaggaag tataaaagac
      841 gaaaaagatg gaaatgctga gatctttact attaaaggtg atacaaaaca gttagagatt
      901 accccaacgg aaagtaaccg aatcattata gcaattttag accaaaatca aaaaagctat
      961 actccaggaa tggaaaaagc aattatggaa actaagttta ttgattcaaa ggctggtaat
     1021 tccgaccaaa aatacttaat cggtgaagca aaaagcgata actggcaagc aataatggtt
     1081 agcgagaaaa aataaagtta tcttttgcta aaaactgaaa taaaaaggct gagtccgggt
     1141 aatatcggcc tcagtctttt aaattgtaga aaatcatctg tagaagatca aacctaatct
     1201 gacagtcccc cgttttaaat taccgtgtct gtcagattaa tttgagctta aattcttttc
     1261 cacccaaatc cgttttccat caagtaaggt tgccatcggt gttctgccat agcacatttt
     1321 tccttgatgt gttc
//
LOCUS       DANMCL010000179         1289 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.185, whole genome shotgun sequence.
ACCESSION   DANMCL010000179 DANMCL010000000
VERSION     DANMCL010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.185"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            3..1217
                     /locus_tag="PXF40_002713"
     CDS             3..1217
                     /locus_tag="PXF40_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003244520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--glyoxylate aminotransferase family
                     protein"
                     /protein_id="HDL5803983.1"
                     /translation="MNPSPRLLMCPGPTDADPRVLRAMSAPILGQFDPEFTSLMNETM
                     EMERRLFQTKNEQTYVVNSTSRGGLETVLTAAICPGDKVLIPAFGRFGYLLNEILARS
                     GADITIIEREWGTVFEPEEIEAELKKGGYKAVAIIHGETSTSMMQPLEEIGKICKQYD
                     AMLIVDTVATLGGVDIRVDEWGIDACIGGTQKCISAPSGTALITYNKRIEEIIAKRKR
                     VEKGIRAESDVDGTLPPIPSNYLDLAQLQDYWSPRRLNHHTETTSAQYGVHEALRIIL
                     QEGLEARFARHILNDKALCAGLEAMGLKIFGDRKHKAPVVTAFHIPEGMSGPALRSDI
                     LNHFGIELATSFGPLDGKVIRIGNMGFSSQKRNVLLTLGALEAVLLSHKVKVPSGDAV
                     AAALAVYKEADK"
BASE COUNT          400 a          268 c          267 g          354 t
ORIGIN      
        1 aaattaatcc ctcccctcgt ttattaatgt gccctggccc aacagatgct gacccacgtg
       61 ttttgcgtgc aatgtctgca cccattttag ggcaatttga ccctgagttt acctcattaa
      121 tgaatgaaac aatggaaatg gaacgccgtt tattccaaac caaaaatgag caaacttatg
      181 tagtcaactc cacctctcgt ggtggcttag aaactgttct aaccgcagcg atttgcccag
      241 gcgataaagt gttaattcct gcatttggtc gttttggtta tttattaaat gaaattttag
      301 ctcgtagcgg tgcagatatt accattatcg aaagagagtg gggaaccgta tttgaaccag
      361 aagaaattga agcagagttg aaaaaaggcg gctataaagc agttgctatt attcacggcg
      421 aaacctcaac ctctatgatg caaccgttag aagagatcgg caaaatctgt aaacaatatg
      481 atgcaatgtt aattgtagat accgttgcaa ccttaggcgg tgtagatatt cgtgtggatg
      541 aatggggcat tgatgcttgt atcggcggta cacaaaaatg tatttccgcc ccatcaggca
      601 cagctttaat cacttataac aaacggattg aagagattat tgcaaaacgt aaacgtgtgg
      661 aaaaaggcat tcgtgcagag tctgatgtag atggcacatt accgccaatt ccaagtaact
      721 acttagactt ggcacagcta caagattact ggagcccacg ccgtttaaat caccacacag
      781 aaaccacttc tgcacaatat ggtgtacacg aagcgttacg cattatttta caagaaggct
      841 tagaagctcg ttttgctcgc catattttaa acgacaaagc attatgtgca ggtttagaag
      901 caatgggttt gaaaattttt ggcgatcgca aacataaagc ccccgttgta acggcattcc
      961 acattccaga aggtatgagt ggcccagcat tgcgtagtga tattttaaac cacttcggta
     1021 ttgaattagc cacctcattc ggccccttag atggaaaagt aatccgtatc ggtaatatgg
     1081 gtttctcaag ccaaaaacgt aacgtacttt taaccttagg tgcgttagaa gccgtacttt
     1141 taagccataa agtaaaagtg ccttcaggcg atgcggttgc agctgccttg gcagtctata
     1201 aagaggctga taaataacca ccttcctaaa tttacaatac aactcactaa taattaatac
     1261 tgtggatatt tatccacagt aaaaccaca
//
LOCUS       DANMCL010000180         1275 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.186, whole genome shotgun sequence.
ACCESSION   DANMCL010000180 DANMCL010000000
VERSION     DANMCL010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.186"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..280
                     /locus_tag="PXF40_002714"
     CDS             <1..280
                     /locus_tag="PXF40_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HDL5803984.1"
                     /translation="DSWVYTDTYRSYDALDVSEFHHERINHSELFAEKQNHINGIENF
                     WNQAKRVLRKYNGINRKNFPLFLKECEFRFNFGTPKEQLKTLRKWCEI"
     gene            286..624
                     /locus_tag="PXF40_002715"
     CDS             286..624
                     /locus_tag="PXF40_002715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005608319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803985.1"
                     /translation="MYYSPKDYLEEYNDLGTIRYKFQEENLYGFLRDGATLVANGIVN
                     EPSVDCFSQEIAQFTGCHIFSSLYIAFNTQRSFKSHWDSRDIFAVQMQGKKRWIIHTP
                     TFKKTIVYAS"
     gene            614..1264
                     /locus_tag="PXF40_002716"
     CDS             614..1264
                     /locus_tag="PXF40_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin-like domain-containing protein"
                     /protein_id="HDL5803986.1"
                     /translation="MHRSKDMPEYAPNLDDVYMDIVLEAGDVLYLPRGWWHDPIPVGE
                     ETVHLAVGIFPAYTHNYLTWVSQNMVEKEIARASLSHYESDKELIAQLAEQTAEYIKD
                     KENYHKFIENFYDQKRVEKPLNLETLGNYQYDSISENQKISFKAKNHYFGYENKIISN
                     GYGISLDEEFGNVIKFLKQGQEVSLNDILEKISEDKRDKVSQLIWQLSYIGVLKLS"
BASE COUNT          440 a          177 c          244 g          414 t
ORIGIN      
        1 tgacagctgg gtttatacgg atacctatcg tagctatgat gcccttgatg tgagcgaatt
       61 tcatcacgag cgaatcaacc attccgaact gtttgcggag aaacaaaacc atatcaatgg
      121 cattgaaaat ttttggaatc aagcgaagcg agtactccga aaatataacg gaattaaccg
      181 aaaaaatttc cctttattct tgaaggaatg tgaatttcgg tttaactttg gtacaccaaa
      241 agaacagctc aaaacgttgc gaaaatggtg tgagatttag ggctaatcta ctacagcccc
      301 aaagattatt tagaagaata taatgatcta ggtactattc gttataaatt tcaagaagaa
      361 aatttatatg gttttttaag agatggggca acattagtcg caaatggtat tgtaaatgaa
      421 ccaagtgttg attgcttctc tcaagagata gctcaattta caggctgtca tattttttca
      481 agtttatata ttgcgtttaa tactcaaaga tcttttaaaa gccattggga tagtcgtgat
      541 atttttgcag ttcaaatgca gggtaaaaag cgttggatta ttcacactcc aacatttaaa
      601 aaaaccattg tttatgcatc gtagtaaaga tatgcctgaa tatgctccta atcttgatga
      661 tgtatatatg gatattgtat tagaagctgg agatgttctt tatttacctc gtggctggtg
      721 gcacgatcct attcctgttg gagaagaaac tgtgcattta gctgtaggca tttttcctgc
      781 ttatactcat aactatctga cttgggtatc tcaaaatatg gttgagaaag aaattgcccg
      841 agcttcttta tcgcattatg agtcagataa agagttgata gcacagttgg cagaacaaac
      901 agcagaatat attaaagata aagagaatta tcataaattt atagagaatt tttatgatca
      961 gaagcgggtt gaaaagccac ttaatttgga aactttagga aattatcaat atgattctat
     1021 ttcggaaaat caaaaaattt catttaaagc caaaaatcac tactttggtt atgaaaataa
     1081 gataatttca aatggatatg gtatttctct tgatgaagag tttggaaatg ttattaaatt
     1141 tcttaaacag ggtcaggaag tttcattaaa tgatatttta gaaaaaatat cagaagataa
     1201 acgagataaa gtttctcagc ttatttggca gttatcttat attggtgtgc taaaattgag
     1261 ttaaataagt aaggt
//
LOCUS       DANMCL010000181         1223 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.187, whole genome shotgun sequence.
ACCESSION   DANMCL010000181 DANMCL010000000
VERSION     DANMCL010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1223
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.187"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(65..>1223)
                     /gene="tet(H)"
                     /locus_tag="PXF40_002717"
     CDS             complement(65..>1223)
                     /gene="tet(H)"
                     /locus_tag="PXF40_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL5803987.1"
                     /translation="AIGIGLIMPVLPTLLNEFVSENSLATHYGVLLALYATMQVIFAP
                     ILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRIIAGITGATGAVCASA
                     MSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMPFIFAAISHSILLILS
                     LLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATYFIIQLIGQIPATIWV
                     LFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEKTTIMISMSIDMMGCL
                     LLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGKLQGTLVSLTNITGII
                     GPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTTPKAVISTP"
BASE COUNT          405 a          252 c          252 g          314 t
ORIGIN      
        1 aataaagtcc tatcaacgtt attaagagcg gacaggactt ttatgatctt tataatttct
       61 agtattaagg ggttgaaata acagctttag gtgtggtttt tctttggtga aaataagcgg
      121 taataagcaa catagcataa agtattgccc ccatcagcca taacagacca tcccaataag
      181 cgacgctata actataaata aaggcaaata aaaggggacc aatgatcccg gtaatattgg
      241 ttaggctcac cagagtacct tgtaatttcc cttgcgcatt atcatcgaca gattttgata
      301 aataaccttg taatgcgggt tgccccatac ctcctgccgc taagcaaatt aatgctggta
      361 agatgaccca aacgtggcct atccacgcta ataataaaca gcccatcata tcaatagaca
      421 tactgatcat aatggtggtt ttttcgcccc atttttgtgc caatttccca gcgacaatcg
      481 cctgaaagaa aatatttaat acacccagaa ccgccaaaga cataccgata gaagttgtgt
      541 tccaatcaaa acgatattgt gtaaacagca cccagatggt ggcaggaatt tgcccgataa
      601 gctggataat aaaataggtt gctaaccaaa agtagaggct tttcttaaaa aaaacagtga
      661 ctgtatttga ggcagtttgg ttttcaggtg tcctattggc aacaagcgct tctctttttt
      721 gtgtttctcg gaaaaagagc aaagagagta ttaataatat cgagtgtgaa atagcggcaa
      781 aaataaatgg catatgagca ctgatatcac ctaataatcc ccctagcatt gggccgataa
      841 taaggccaac accaaaagca ccacctaaga aaccaaaata gcgagttcga tttttagcgg
      901 gagtcacatc actcatcgct gatgcacata cggcacctgt tgcgcctgtg atccccgcaa
      961 tgatgcgccc aatatagagc atccaaagtg tggttgagaa tgccattaaa agatagtcga
     1021 gtgccgcgcc taaaagggaa aacagcaaga tgggttttct gccgtattta tcagacagtc
     1081 gtcctagaat aggagcaaaa ataacctgca tggtagcata gagcgctaat agcacaccgt
     1141 aatgggttgc cagtgaattt tcactgacaa attcatttaa tagagtaggg agtactggca
     1201 tgataagccc gataccaatg gca
//
LOCUS       DANMCL010000182         1185 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.188, whole genome shotgun sequence.
ACCESSION   DANMCL010000182 DANMCL010000000
VERSION     DANMCL010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1185)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1185)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1185
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.188"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..877
                     /locus_tag="PXF40_002718"
     CDS             <1..877
                     /locus_tag="PXF40_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803988.1"
                     /translation="KHGFAIAIQNSVNYLYEIAERQPPCNFELCWKNCAAHYLAIKSA
                     ESNNERDLNLFLDYINEPKDSTFTVAPLYKDNTLETRMILEIIKDDNQIGFGFCEASD
                     LSLIEDETKKIKAAMSLIDDLDPDTSNEIKCFIDTIYLTKEGLNGERFMRSGTNFYMW
                     GMMFLYINKEHSILYYADHIIHECAHTALNIINATDELVTNSADERFKAPLRKDTRPM
                     IGLFHALFVLHRICSSFQKMKEKIDDVYYDEFNHRLNDNLLKLHETYQTVRENAKTTE
                     IGEKILNEIAKTWKL"
BASE COUNT          407 a          151 c          204 g          423 t
ORIGIN      
        1 gaagcatggg tttgctatag caatccaaaa ttctgttaat tatttatatg aaattgcaga
       61 acggcagcct ccttgtaatt ttgaactatg ctggaagaat tgtgcagcac attatttagc
      121 aataaaatct gcagaaagta ataatgaaag ggatttaaat ttattccttg attatattaa
      181 tgagccgaaa gattctacat ttacagtagc tcctttatac aaggataata cactagaaac
      241 aagaatgatc ttagaaatta ttaaagatga taaccaaatt gggtttggat tttgtgaggc
      301 tagtgattta tctttaattg aggatgaaac taaaaaaatc aaggcagcaa tgagcttaat
      361 tgatgattta gaccctgata cttctaacga gataaaatgt ttcattgata caatttattt
      421 aacaaaagaa ggccttaatg gcgagcgatt tatgcgttct ggcacaaatt tttatatgtg
      481 gggaatgatg tttttgtata taaataagga acactctatt ctttattatg cagatcatat
      541 aattcatgaa tgtgctcata cagctcttaa cattataaat gcaactgatg aattagtaac
      601 aaattcagct gatgaacgtt ttaaagcacc tttaagaaag gatactcgtc ctatgattgg
      661 gctatttcat gcgttgtttg tactccatag aatatgttcc tcctttcaaa aaatgaaaga
      721 aaagatagat gatgtttatt atgatgaatt taaccataga ttaaatgata acctgttgaa
      781 gttacatgaa acataccaga ctgttagaga aaatgcaaaa acgacagaga ttggtgagaa
      841 aattttaaat gaaattgcca aaacttggaa actttaatca atctgaaatt atgatgagaa
      901 tgttagtttt ctttaattca atattctcat ctacattaat tgcttttgct attttctttt
      961 ttatggataa tggtataaat gctcatgagg tatcattctt ggtatctgtt aaattttggg
     1021 cgattatgct tttttcattg tctatttata tttttaacca gactcaaata aggtacttat
     1081 ttgtattgtc gggtatatta aagattattg cagttattat tatttatttg gaacagagcc
     1141 tcatatcttt aacggcattt attttgataa attgtctagg gggca
//
LOCUS       DANMCL010000183         1149 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.189, whole genome shotgun sequence.
ACCESSION   DANMCL010000183 DANMCL010000000
VERSION     DANMCL010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.189"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(199..429)
                     /locus_tag="PXF40_002719"
     CDS             complement(199..429)
                     /locus_tag="PXF40_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005720191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803989.1"
                     /translation="MALHRCPECRKRISDSLEHCIHCGFSFKEADLAIYRQKLEQRRL
                     HNQEINRKSVKLQLIWLVIFIAVIALASWITN"
     gene            complement(437..>1149)
                     /locus_tag="PXF40_002720"
     CDS             complement(437..>1149)
                     /locus_tag="PXF40_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803990.1"
                     /translation="SSFSLAFFTLTSFATAYCYGWGQAIFHGYPWWHVEIGNASMARS
                     LAYVFGTSVILFLCYALGYSLLNKVFQLHYFRNLGWLRVIVLVSVFTVPVILTFYLFT
                     GIVPIYISFIYIFVSGVSVFFFRKRWNNTKFDLDFRKMLLGGSFALFNIFIFLYFSLL
                     SLHIGYLRAGLRTTYDYIEIENQKYYILSTNSDNGYIMGTKIRGNQSFLFFNRDTHQY
                     YHVHIEQCTDSRLCKVIV"
BASE COUNT          407 a          214 c          182 g          346 t
ORIGIN      
        1 ctacctattt tttaattaac caacatgcaa caaaaaccat attaacaata aggttatcac
       61 tggtttttat cccttatttt ttatgaaaaa tcttataata ttgaatattt actccagttt
      121 taatcgagaa ttatgttctt ttttattttg ttattctctt taggtataaa aaaacccggt
      181 aaataccggg cttttatttc aattggttat ccaacttgcg agagcaatta ccgcaataaa
      241 aataactaac caaataagtt gtaattttac gcttttgcgg ttgatctcct ggttgtgtaa
      301 tcggcgctgt tctaactttt gccgatatat cgctaaatcg gcttctttaa acgagaagcc
      361 acaatgtatg caatgttcta aactgtcgct aatacgcttt cgacactccg gacaacggtg
      421 taatgccata attacctcaa actattactt tgcataatcg gctatccgta cattgttcaa
      481 tatgaacatg gtagtattga tgagtatcac gattgaaaaa caagaaagat tgattacctc
      541 ttatttttgt tcccataatg tagccgttat cactgttggt ggataatatg tagtattttt
      601 gattctctat ttcgatgtaa tcataggtag ttcttagtcc ggcacgcaaa taaccaatat
      661 gcaatgagag caaactgaaa tagagaaaaa taaagatgtt aaacagggca aaacttcctc
      721 ctaatagcat ctttctaaag tccagatcaa acttggtatt attccatctc ttgcggaaga
      781 agaatacgct cacaccactt acaaaaatat agataaaaga gatataaatg ggcactatcc
      841 cggtaaataa gtaaaaagta agaataacag gcactgtaaa cacagaaacc aacacaatca
      901 cccttaacca acctagattt cggaaataat gcagctgaaa aactttattt agtaaactat
      961 aacctagtgc ataacacaag aataagatga cggaagtacc gaatacataa gccaaacttc
     1021 ttgccatact ggcattgccg atttcaacat gccaccaagg gtagccatga aatatggctt
     1081 gtccccaacc gtaacagtaa gcggtagcaa aactagttaa tgtaaaaaat gcaagagaaa
     1141 atgaagaat
//
LOCUS       DANMCL010000184         1039 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.190, whole genome shotgun sequence.
ACCESSION   DANMCL010000184 DANMCL010000000
VERSION     DANMCL010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.190"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            197..445
                     /locus_tag="PXF40_002721"
     CDS             197..445
                     /locus_tag="PXF40_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803991.1"
                     /translation="MISGEKMTWESLGASAIGGAIGGGIGATMKAGAVTASTLSALGG
                     GMGEGLYKSTSQGIKNSIGIKASCNQSGSDYGDGCDYQ"
     gene            457..660
                     /locus_tag="PXF40_002722"
     CDS             457..660
                     /locus_tag="PXF40_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803992.1"
                     /translation="MKIQFPISYQEFRENYFEKKPLLMKGAISQKDLLSWKSINEILP
                     RCDLISEDAIKVMHKGKRAHKKD"
     gene            699..>1039
                     /locus_tag="PXF40_002723"
     CDS             699..>1039
                     /locus_tag="PXF40_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_046701250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HDL5803993.1"
                     /translation="MKITHCKLKKSLQKKLLEFFVAEVTARTAADLLGIQPNTAALFY
                     HKIRLVIEHHLALEAHEIFEGKIEVDESYFGGHRKGKRGRGAAGKVAVFGLLKRQGKV
                     FTKYQIRNANAG"
BASE COUNT          341 a          137 c          251 g          310 t
ORIGIN      
        1 aagattgtaa aaaataaaaa tgtacaagat gttattgagg ctatagttct aatagtattt
       61 gttgtaatta taaacatcat agaggaatat ctcttatgaa agagttaaaa attgaggatt
      121 gccaatttgt ttcggcaggc ttgcacttgt tattgtagga gctgttgctg gagctgcata
      181 ttatgttggg aatggtatga tttctgggga aaaaatgact tgggagagtt tgggagcatc
      241 agctataggt ggggctattg gtggcggtat tggagcaaca atgaaagctg gtgcggtgac
      301 agcgtcaacc ttatctgctt taggtggtgg tatgggggag ggcttgtata aaagtacttc
      361 tcaaggtatc aaaaatagta ttggtataaa ggcgagttgc aatcaatcag gttcggatta
      421 tggtgatgga tgtgattatc aataagagag tatattatga aaattcaatt tccaatttct
      481 tatcaagaat ttcgtgaaaa ctattttgag aaaaaaccac ttttaatgaa aggagcaata
      541 tctcagaaag atttactttc ttggaagtca ataaatgaaa tattacctcg ctgtgattta
      601 atttctgagg atgcaattaa ggtaatgcat aaagggaaaa gggctcataa aaaagattag
      661 gggctgtagt agattagcat cactgctata ctacaaaaat gaagataacc cattgtaaat
      721 taaagaaatc tttgcagaaa aagcttcttg aattttttgt tgctgaagtg accgctagaa
      781 ccgctgctga tttattaggt attcaaccca atacggcagc cctgttttac cacaaaatta
      841 ggctggtcat tgaacaccat ttagcccttg aagctcatga aatttttgag ggaaaaattg
      901 aggtagatga aagctatttt ggtggtcatc gcaaaggaaa acgagggcga ggtgcggctg
      961 ggaaagtcgc tgtattcggt ttgttgaagc gtcaaggaaa ggtgtttaca aaataccaaa
     1021 tcagaaacgc taatgccgg
//
LOCUS       DANMCL010000185         1018 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.191, whole genome shotgun sequence.
ACCESSION   DANMCL010000185 DANMCL010000000
VERSION     DANMCL010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.191"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(25..>1018)
                     /locus_tag="PXF40_002724"
     CDS             complement(25..>1018)
                     /locus_tag="PXF40_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803994.1"
                     /translation="NDNYRDIIALLPVALYVFHLRSLKHIKNLESNSYLDEEGRDTVN
                     KYKAFFSIFEAEIRDATCICDNKIVTINGEVCCDIKEVARKIVIEFLNEVDIGNKVKF
                     YYPDERHELFVELLIVLATLRIYRNRNIFFFEKGFFNFFPEFITILGTGAFNGFLDFP
                     SLVGKVFPEIIDTINEGLDLDIAIENFEVLSQEEMTECMGLYEQALIKKAEEGEIGLL
                     NVDEINSFYEDNSELILLAKQPMVEEIIPKPDSKASSAILKFFDSNSNILIAKLKESG
                     LQLSAVALQNDQNIARVANVVYNLLPGMVRIFVSYDTVENFLLNNRQWLINKLV"
BASE COUNT          339 a          201 c          124 g          354 t
ORIGIN      
        1 tatccatagt tcttcccctc caaattaaac taatttatta atcaaccatt ggcggttatt
       61 taataagaaa ttttctacgg tatcgtaact tacgaaaatt cttaccatgc ccggcaataa
      121 gttataaacg acatttgcta ctcgtgcgat attttggtcg ttttgtaatg ccacagcact
      181 taattgcaaa ccactttctt ttaatttagc aattaagata tttgagtttg aatcaaagaa
      241 ttttagaatt gcagaggagg ctttgctatc tggtttaggg attatctctt caaccatagg
      301 ttgtttagca agtaagatta gctcactatt atcttcataa aagctattta tttcatcaac
      361 atttaataaa ccaatttcgc cttcttcagc tttcttaatg agagcctgct catataaacc
      421 catacattca gtcatttctt cctgactcaa cacttcaaag ttctcaatcg caatatctaa
      481 atctaaaccc tcatttatcg tatcaataat ttctggaaaa acctttccta ccaaactagg
      541 gaagtctaaa aatccattaa acgcaccagt cccgagaata gtgataaatt cgggaaaaaa
      601 gttaaaaaac cccttttcaa agaagaatat atttctatta cgatatattc ttaatgttgc
      661 tagaacaatg agcagctcta caaaaagctc atgtctttca tctgggtaat aaaacttaac
      721 tttattacca atatccactt catttagaaa ttctataaca attttccttg ctacctcctt
      781 aatatcacag cacacctcac cattaattgt tacaatttta ttgtcacaaa tacatgttgc
      841 atctcgaatc tctgcttcaa aaatagagaa aaatgccttg tatttattta ccgtatctct
      901 tccttcttca tctaaataac tgttagattc tagatttttg atatgtttca aagatcttaa
      961 gtgaaagaca tataacgcta ctgggagtag agcaataata tctctataat tatcatta
//
LOCUS       DANMCL010000186          992 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.192, whole genome shotgun sequence.
ACCESSION   DANMCL010000186 DANMCL010000000
VERSION     DANMCL010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.192"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(42..881)
                     /locus_tag="PXF40_002725"
     CDS             complement(42..881)
                     /locus_tag="PXF40_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HDL5803995.1"
                     /translation="MQSYPYLLVNVFATSHFGGNPLAVFYEADGLTDLQMQLIARQFN
                     LSEVVFIQSSTDSQAVKKLKIFTPDYEMPFAGHPTVGAAFVLHSAFDFPTTYRLQTNA
                     GLVAIQHQHNVTTFALTNGVNLENTPLSRAECASILGLNVADIASEPCYVNTGVEQLL
                     VELASQQAVEKCKINANLAEKAFLKDSVYVWCREGNEAKVRLFFQSQGSIVEDPGTGS
                     AAANLGGWHIAQGKIPIQLQISQGDEIQRPNRLLLKVDQNGKIFVGGEVILVGKGEFY
                     LPE"
BASE COUNT          287 a          228 c          195 g          282 t
ORIGIN      
        1 tgcataaaaa ttcacttata gcaaacagaa tttgcttacc ctcattcggg taaataaaac
       61 tcgcctttgc cgactaaaat aacctctccg ccaacaaaaa tcttcccgtt ttgatcgact
      121 tttaataaca ggcgattcgg ccgttgaatt tcatcacctt gtgagatctg aagctggatt
      181 ggtattttgc cttgtgcaat gtgccaaccg cctaaatttg ccgctgccga accggtgccg
      241 gggtcttcga caatcgaacc ttgcgattga aaaaacagtc gcactttcgc ctcatttccc
      301 tcacgacacc aaacatatac actgtctttc aaaaatgctt tttcagccag atttgcattt
      361 attttgcact tttcgaccgc ttgttgagaa gctaactcaa ccaataactg ctccacgccg
      421 gtgtttacat aacaaggctc ggacgcaata tccgcaacat tcagccccaa tattgaggca
      481 cattctgcac ggcttagcgg tgtgttttcc aggttcacac cattggttaa agcaaaagta
      541 gtcacattat gttgatgttg aatcgctacc aatccggcat tagtttgcaa gcgataggtt
      601 gttggaaaat caaaggcgga atgcaacaca aaagccgctc caacagttgg gtggccggcg
      661 aacggcattt cataatcagg cgtaaaaatt ttgagttttt tgaccgcttg tgaatcggtg
      721 gaagattgaa taaataccac ttcagaaagg ttaaattggc gagcaataag ttgcatttgt
      781 aagtcggtta atccgtccgc ttcataaaat actgcaagcg ggttgccgcc aaaatggctt
      841 gttgcaaaca cattcaccag caaataagga tagctctgca tttatcactc cttacataaa
      901 cttaaagcca cattgggcga aaattctacc attttggtgg cgaatcgtaa aattggaaaa
      961 tttatcggta tccctcttta gagttaacta tt
//
LOCUS       DANMCL010000187          980 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.193, whole genome shotgun sequence.
ACCESSION   DANMCL010000187 DANMCL010000000
VERSION     DANMCL010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 980)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 980)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..980
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.193"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            99..725
                     /locus_tag="PXF40_002726"
     CDS             99..725
                     /locus_tag="PXF40_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HDL5803996.1"
                     /translation="MTKIKFYGNLKKFGSEFSLEVKDTAEAIRALCTQISGLREALRD
                     GVYKVRIGKQYLDPSALEKGLFYCLKKGQTIHFTPVIKGAKSGGVFNFVLGAALIGAA
                     FFTGGASIAAWGAGAKMMGMLGASMLLGGVSQMLTKMPKAPTMGNETEKESSTAFSNL
                     NNLVTQGKPVPLAYGLIRTGSLVISQGVETITIKENQPASNKKTGFRK"
     gene            774..>980
                     /locus_tag="PXF40_002727"
     CDS             774..>980
                     /locus_tag="PXF40_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5803997.1"
                     /translation="MNLTKAESNLNAKITEEKKARVDADKVNADKLTDITSRVANAES
                     TITNFQSTKANKSEVASLAQSSLQA"
BASE COUNT          336 a          176 c          216 g          252 t
ORIGIN      
        1 attgcatata aacaaataag taataatatg cttatagagt taagaaaaat aaagaacata
       61 aatccccttt attttggcta taattgtaat ggtgagtcat gactaaaatt aaattttacg
      121 gcaatttaaa aaaatttggt agtgaattta gcttagaagt taaagatact gccgaagcta
      181 tccgagcctt atgtacacag attagcggat tgcgtgaggc attacgagac ggtgtttata
      241 aagtccgtat cggcaaacag tatttagacc cgtcagccct tgaaaaaggg cttttttatt
      301 gtctgaagaa agggcaaacc attcatttta cccctgttat caaaggagcg aaaagcggtg
      361 gcgtgtttaa ttttgtttta ggtgcagcct tgatcggagc cgcatttttt actggcggtg
      421 cttctattgc ggcttgggga gctggagcaa aaatgatggg tatgttaggg gcttcgatgt
      481 tactaggagg agtttcccaa atgctcacca aaatgccaaa agcccccaca atgggtaatg
      541 aaacagaaaa agaaagctca acggcttttt caaatttaaa taacttggtg actcaaggca
      601 aacctgtgcc gttggcttat ggcttaattc ggaccggctc gcttgtgata tcgcagggag
      661 ttgagacgat caccattaaa gaaaaccaac cggcaagcaa caagaaaaca ggctttagaa
      721 aataagggat aattaccgat tcagcacaag cacagcaact taatcagtta tctgtgaact
      781 tgaccaaagc agagagcaat ttaaatgcca aaatcacgga agaaaaaaaa gctcgtgttg
      841 atgcagataa agtgaatgca gataaactca cagacataac aagccgtgtt gcaaatgcgg
      901 aatcaactat taccaatttc caatcaacca aagcgaataa aagtgaggtt gcgagccttg
      961 cacaaagttc gttgcaggca
//
LOCUS       DANMCL010000188          979 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.194, whole genome shotgun sequence.
ACCESSION   DANMCL010000188 DANMCL010000000
VERSION     DANMCL010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.194"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            134..820
                     /locus_tag="PXF40_002728"
     CDS             134..820
                     /locus_tag="PXF40_002728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5803998.1"
                     /translation="MAANSINASHIVGSSITADKLNVNNLAAISANLGKVTAGTITGT
                     TISGGTISGTTITGGIIKGARIEGLTGKFTGELEINQLIGGNIYEAKTWTSKATGKSK
                     TYSETKNSFALSDTYYEYVCQFVLPATKATRTLYVVHTPTGESKSETFYGSGSNRTPT
                     TITLPSVIDISNTISPNVSNPFNDSGAILIANTQYVVTCRAWCAGRGRSAKVNFRAII
                     SSTNGSSYQL"
BASE COUNT          344 a          178 c          202 g          255 t
ORIGIN      
        1 cccttggcaa aatgccggtg taaccgctat ccacggtggc tcaatagtta ctaataccgt
       61 tactgctcaa caaattgcag caaataccat taccgccaac gaaatcgcag ccggcacgat
      121 tgcagctcga aatatggcag caaactcgat taatgcaagt catattgtgg ggagttcgat
      181 cactgcggat aagctaaatg taaacaattt agcggcaata tcggcaaatc ttggtaaggt
      241 aactgctggt acaattacag ggacgacaat tagtggtggg acaatttcag gtacaacaat
      301 tacaggggga ataattaaag gagcaagaat tgagggatta acaggtaaat ttactggaga
      361 acttgaaatc aaccaattga tcggaggtaa tatctatgag gctaaaactt ggacatcaaa
      421 agcaacaggg aaaagtaaaa catattcaga aacgaaaaac agttttgcat taagtgatac
      481 atattatgag tatgtatgtc aatttgtact acctgctaca aaagcgacga gaacattgta
      541 tgttgtccac actccaacag gagagagtaa aagcgaaact ttttatggta gtggtagtaa
      601 tcggacaccg acaacaatta cattaccgtc tgtaattgat attagcaata ctatttcacc
      661 taatgtatct aacccattta atgattctgg ggcaatactc attgctaata ctcaatatgt
      721 agtaacgtgt cgtgcgtggt gtgcagggcg tgggagaagt gctaaagtga attttcgagc
      781 aattatatca tctacaaatg gttcatctta tcaattatag gaggcaaata tgaaaaaaat
      841 tatactactt acaacaatta tggtttcagc ttgtacaact caatataagc aagactatac
      901 aacaaaacca accttttgtt atcaactagc ccctcaagag caattaccgg ggaaaaactg
      961 tattggctca ggagggcat
//
LOCUS       DANMCL010000189          966 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.195, whole genome shotgun sequence.
ACCESSION   DANMCL010000189 DANMCL010000000
VERSION     DANMCL010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.195"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            442..627
                     /locus_tag="PXF40_002729"
                     /pseudo
     CDS             442..627
                     /locus_tag="PXF40_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249206.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          329 a          116 c          194 g          327 t
ORIGIN      
        1 tgtggaagat gttgtaagta tagtattatt tttagaatta tttttaatat tggtttttgt
       61 gatcagaatt agattaaagg gagaatgaaa tgaaagaacc atcaatttta caattaagct
      121 tagtagttgg agggaattct gaaaataagg ctaatcaacc agatcttgta tcttatggcg
      181 ttgcttttgc tacagggttt gcaagagggg ggctttaggc ggtttatcca gtacttctgt
      241 taatttagcc cttgatttag cgaggagcct acctattaca atacatgaaa attctttacc
      301 tagcggtgta aaagaattaa ttccatcatc tttaccaata aagcctacgt ttggagttcc
      361 aggtagaacg aataataacc aatctggctc aaactacgat tgtggtgatg gtacagatta
      421 tcaaggctag tggagatgaa aatgaaaatt caatttccaa tttcttatca agaatttcgt
      481 gaaagttatt ctgagaaaca accactttta atgaaaggtg ctatagagta gcaagattta
      541 ctttcttgga aggctatcaa tgaagtatta cctcgttgtg atttactttc tgaagatgca
      601 attaaagtaa tgtataaagt aagttgaaat actttaatgg agaaagtatg gtggattttt
      661 ctattttgat attagttata gtattgcctg ttatttttgt gaaagttata gatgtactgt
      721 tgcttagtaa gttagatatg agtaaggaaa aaaatgacaa atgccaaata ataatatatt
      781 tatttataat aattttactt ggggcatata agagctattt tattcaaaaa taaataagag
      841 gagagaaaat gaaagatctt agtattaagg attgtgaaat aatatatgga ggcatagccc
      901 ctttgtggtg ggatggtact ggcattacat catactggga actaaattat accaccctac
      961 cactag
//
LOCUS       DANMCL010000190          966 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.196, whole genome shotgun sequence.
ACCESSION   DANMCL010000190 DANMCL010000000
VERSION     DANMCL010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..966
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.196"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            141..>966
                     /locus_tag="PXF40_002730"
     CDS             141..>966
                     /locus_tag="PXF40_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006250663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HDL5803999.1"
                     /translation="MLNWAGKSTAYQTLQTPTSKTLTPCEEESVDFENTQNIFIEGEN
                     LDVLKALQKSYFNSVKMIYIDPPYNTGNDFIYNDSFADTKADYAEKVGDVDEHGKLKR
                     AFVRNSKENGHYHSNWLNMMLPRLHLAKNLLRDDGVIFISIDDNEQAQLKLLCDEVFG
                     EENFVAILSVENNPKGRKNSKFISVSNDFCIIYAKNKEMGKFVENIPKNAKDMCQDEN
                     GHYVHASGKRVLVGENKFNQPVTDFTSDKHYSVYFNKLDDDIILKFEDSLDDKDLNL"
BASE COUNT          337 a          156 c          179 g          294 t
ORIGIN      
        1 ttgccaactt ttcgcttaaa gatcaacaac tttctcaatt aaaatccctt ttacctgaaa
       61 ttttcaccga aggtaaaatc gacttcgaca aattccaaca acttttttcg gataattttt
      121 ccaccgaacc tgaccgctat atgctcaact gggcaggaaa atcaacagcc tatcaaacct
      181 tacaaacccc aaccagcaaa acgctcactc cttgcgagga agagagtgtg gattttgaaa
      241 atacgcagaa tatctttatt gagggtgaaa atttagatgt attaaaagcc ctgcaaaaat
      301 cctacttcaa ttcggtcaaa atgatttata tcgatccgcc atacaataca ggcaacgatt
      361 ttatttataa cgacagtttt gccgatacca aagcagatta tgcggagaaa gtgggcgacg
      421 ttgatgaaca cggcaaattg aaacgagcct ttgttcgtaa cagcaaagaa aatgggcatt
      481 atcacagtaa ctggctgaat atgatgttgc ctcgtttgca tctcgcaaaa aatttactgc
      541 gtgatgacgg ggtgattttt atttcaattg atgataacga acaggcacag ctgaaattgc
      601 tttgtgatga agtgtttggg gaggagaatt ttgttgccat attatcagtt gaaaataatc
      661 cgaaaggtag aaagaattct aaatttattt ctgtaagtaa tgatttttgt attatttatg
      721 ctaaaaataa agaaatgggg aaatttgttg aaaatattcc taaaaatgct aaggatatgt
      781 gtcaagatga aaatggacat tatgttcacg caagtggaaa acgagtatta gttggggaaa
      841 acaaatttaa tcagcctgta acagatttta cctcagataa acactattca gtttatttta
      901 ataaattaga tgatgatatt attttaaagt tcgaagattc tcttgatgat aaggatttaa
      961 atttaa
//
LOCUS       DANMCL010000191          934 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.197, whole genome shotgun sequence.
ACCESSION   DANMCL010000191 DANMCL010000000
VERSION     DANMCL010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 934)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 934)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..934
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.197"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(77..382)
                     /locus_tag="PXF40_002731"
     CDS             complement(77..382)
                     /locus_tag="PXF40_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HDL5804000.1"
                     /translation="MRKPAHPGQILLDGFIEPNNIKIKELADHLGFSRETLSRVLHGK
                     TPMTANLALSLEEAGISTAKLWLNLQTKYDLWELKQQRLNPVMPFHFGGNYGETAHA"
     gene            complement(391..666)
                     /locus_tag="PXF40_002732"
     CDS             complement(391..666)
                     /locus_tag="PXF40_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011039853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5804001.1"
                     /translation="MIKSFKHKGLKQYFEKGITKGIQLNHQRKIDGILDLIDSAESID
                     EFMPFYQCHELKGNRKGIYSMTVNGNWRITFEFVNGDAYILNYEDYH"
BASE COUNT          315 a          180 c          116 g          323 t
ORIGIN      
        1 aatattcctt gaataaaccg ccctcgtggc ggttttcttt tcctaagaac aataaaatcc
       61 tccgaagagg gcattattaa gcgtgagcag tttctccata atttccacca aaatgaaaag
      121 gcataacagg atttaaccgc tgctgcttta actcccataa atcatattta gtttgtaagt
      181 ttagccataa cttagccgta ctaattcctg cctcttctaa acttaacgct aaatttgcag
      241 tcattggtgt tttgccgtgt aatactcttg ataaagtttc acgagaaaac ccaagatgat
      301 ctgctaattc tttaattttg atgttatttg gttcaataaa tccatctaat aaaatttgcc
      361 ccggatgtgc tggtttacgc ataactcccc ctaatgataa tcttcataat tcaaaatata
      421 agcatcgcca tttacaaatt caaatgtaat ccgccagttg ccattaaccg tcatagaata
      481 aatgcctttt cgatttcctt ttaactcgtg gcattggtaa aaaggcataa attcatcaat
      541 actttctgct gaatcaatca aatctaaaat accatcgatt ttacgttgat gattaagctg
      601 aatacctttt gttattcctt tttcaaaata ttgttttaag cctttatgct tgaagctctt
      661 aatcataata acacctagca aacacaatgt gatacaaata tatcacgcac aataaaaaag
      721 acaatctttt ttaagtgctt tttctcctaa ttgtctttct cttcttatgt taagtgttta
      781 aaaaacaagc aatcaaacaa cctttctaaa aataatttct ctttaaaatc aattatttaa
      841 tcacgaattg aaatttgttt ggctaaaata attacaaatt gaattgactt aatgatttca
      901 atttgtgata ataaacccat caaaacaaac aacg
//
LOCUS       DANMCL010000192          886 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.198, whole genome shotgun sequence.
ACCESSION   DANMCL010000192 DANMCL010000000
VERSION     DANMCL010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 886)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 886)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.198"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..626
                     /locus_tag="PXF40_002733"
     CDS             <1..626
                     /locus_tag="PXF40_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HDL5804002.1"
                     /translation="NTVLNTLQCDYVLFSSEDNYQVIINLKKADYPKNEANFITMTLN
                     KKFGDAKFSGANHYLRCASFFNKKSTNNNEKSVLVDFTNTKTEEDNKCYFDNLLSSYK
                     NNNVKLEPLDIKIIDELGDDKAVIAQKEIQAEIALCKRIFKQLDWSAVDFRIVKRLYR
                     KGFSENEIAVALVRFTDFEDRHCDSHDYLTRTITKAIQNYQQCSKAC"
BASE COUNT          355 a          134 c          140 g          257 t
ORIGIN      
        1 taaacacagt tttaaacaca ctacaatgcg attatgtgct gttttcttct gaagacaact
       61 accaagtcat catcaatcta aaaaaagctg attaccccaa aaatgaagca aatttcatta
      121 caatgacttt aaacaagaaa tttggtgatg caaaattttc cggtgcaaac cattacttaa
      181 gatgtgccag cttcttcaac aagaaaagca caaacaacaa tgaaaaatca gttttagttg
      241 attttacaaa cacaaagaca gaagaagaca ataaatgtta ttttgataac ttattatcta
      301 gttataaaaa taacaatgta aaacttgagc ctttagacat caaaattatt gatgagcttg
      361 gagatgataa agcagttatt gcacaaaaag aaattcaagc agaaattgct ttgtgtaaac
      421 gtatattcaa acaattagat tggtctgctg ttgattttag aattgttaag cgtctgtaca
      481 ggaaaggatt ttcagaaaat gaaattgctg ttgcacttgt cagatttact gattttgaag
      541 acagacattg tgattcacat gattatttga caagaacaat cacaaaagcc attcaaaact
      601 atcaacaatg ctcaaaagct tgttagatgt tataaggaaa gttaaaaatc aacaaaagat
      661 ttgacaaatt tatataaaat ccttattata tatgaaaagg aagcgtagcc ttaaaacgca
      721 aatgtgggtt agcacatggt caatctgaaa ctaatctagg atatttaagg tctagcagat
      781 ggcaagcatc agaaaaactt gaaactaatc taggatattt aaggcctagc agatggcaga
      841 catcagaaaa actaacactt aaattttata tttattaagc ccacgt
//
LOCUS       DANMCL010000193          873 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.199, whole genome shotgun sequence.
ACCESSION   DANMCL010000193 DANMCL010000000
VERSION     DANMCL010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 873)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 873)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..873
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.199"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..836
                     /locus_tag="PXF40_002734"
     CDS             <1..836
                     /locus_tag="PXF40_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HDL5804003.1"
                     /translation="WVGANLTEEELSLINKVKNHRSVYKFSDIATVEVGIVTGANDFF
                     LVNDHIVSKYKLDRFVYPMFGKSQHCKGIIYDNEQHFENKEKNLPTNFIYLEDNESNL
                     PLLVQTYIKEGEDAEYHKRYKCKIRKPWYKVPSVYSTNIGMLKRSHEAPKLILNKLGA
                     YTTDTAYRIKSNKFQDEILVCCFLNPLTMILSELNGRFYGGGVLELVPSEIRNLYIPI
                     IENIDFNIEELNEEVKAGNIENVIRNNGEKILTNLGFSQEDNAMLMSIWKKLKNNRLR
                     R"
BASE COUNT          340 a           96 c          163 g          274 t
ORIGIN      
        1 aatgggttgg ggctaattta actgaagaag aattgagtct tattaataag gtaaaaaatc
       61 atagatctgt ttataaattc tctgatatag caacggtgga agttggtata gttacgggag
      121 ccaatgattt tttcttagtt aatgatcata ttgttagcaa gtataagtta gatcggtttg
      181 tttatcctat gttcggaaaa agtcagcatt gcaaaggaat catatacgat aatgaacaac
      241 attttgaaaa taaagaaaaa aatttgccaa ctaactttat ttatttagaa gataatgaga
      301 gtaatcttcc tttacttgta caaacttata taaaagaagg tgaggatgcg gagtatcaca
      361 aaagatataa atgcaaaata agaaaaccat ggtataaagt tccatcggtt tattcaacta
      421 acataggaat gctgaaaaga agtcatgaag caccaaaact aatattgaat aaattggggg
      481 cttatactac cgatactgcg tatcgtataa agtcaaataa atttcaagat gagattcttg
      541 tgtgctgttt cctaaatcca ttaactatga ttttatctga gttaaatgga aggttttatg
      601 gtggaggcgt attagaatta gttccttctg aaattagaaa tctatatatt ccaataattg
      661 agaatattga ttttaatata gaagaattaa atgaagaagt taaagctgga aatatagaga
      721 atgtcataag aaacaatggt gaaaaaattt taacaaattt aggcttttct caagaagata
      781 atgccatgtt aatgagtata tggaaaaagc taaaaaataa caggttaaga agatagcttg
      841 aaaaggttgt gtggtttata catcacacaa cct
//
LOCUS       DANMCL010000194          867 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.200, whole genome shotgun sequence.
ACCESSION   DANMCL010000194 DANMCL010000000
VERSION     DANMCL010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..867
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.200"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            116..697
                     /locus_tag="PXF40_002735"
                     /pseudo
     CDS             116..697
                     /locus_tag="PXF40_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252416.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
     gene            698..>867
                     /locus_tag="PXF40_002736"
     CDS             698..>867
                     /locus_tag="PXF40_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006252415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HDL5804004.1"
                     /translation="MLKCKQITELVSLSQEQKLTLKQRVNVQVHLMLCSRCRAFSQNC
                     KTVDKLMKEFNS"
BASE COUNT          290 a          150 c          180 g          247 t
ORIGIN      
        1 ttagtatgtt aggtttaaaa atacttcata ccaatatccc ctaagttggg taaaacctta
       61 tgaaatagga tacaagcggt tagtttctct caatttttta ccaaaggatc acgcaatgag
      121 ccaaccggct ttacggcaaa tttccccctc gcagctagaa gatattcgtc tgcaaatggt
      181 gaagtttgcc tttttacagt taaaaaataa cgaacttgcc gaagatgtgg tgcaagaggc
      241 gtttgtcagc gcttataaat atgccgacag cttcaaaggt gaaagtgcgt taaaaacgta
      301 gatttttgca attttaaaaa acaagatcgt agatttagtg aaagccaaag gcaaattggt
      361 ggcagtatct gagctgatgg aagaagacga tcacgatctt gccgataaat tgtttaacga
      421 aaatggcggt tgggataaag atgcttatca atctaatgag tggaagaaca ccgaaagcca
      481 tacctattcc gctcaattct ggcaagtatt tgaattttgc ctaaataatc tgccggcaaa
      541 tcaagcaagg gtgtttatga tgcgttccca tttggaaatg gaaaccgaag aaatttgcgc
      601 agaatgtgag atttcaccag caaatgtgca taccttactg tatcgggcaa gattgcagtt
      661 acaggtctgt ttaagtcaaa aatggtttgg aggttaaatg ttaaaatgta agcaaattac
      721 cgaattagtt tctctgtccc aagaacaaaa actgacatta aaacaacgtg ttaatgtgca
      781 agttcattta atgctttgtt ctcgttgcag agcctttagc caaaactgca aaaccgtaga
      841 taagctaatg aaagaattta actctta
//
LOCUS       DANMCL010000195          859 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.201, whole genome shotgun sequence.
ACCESSION   DANMCL010000195 DANMCL010000000
VERSION     DANMCL010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 859)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 859)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..859
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.201"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>859
                     /locus_tag="PXF40_002737"
     CDS             <1..>859
                     /locus_tag="PXF40_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1983 domain-containing protein"
                     /protein_id="HDL5804005.1"
                     /translation="THTIKTETIAGGRKAIAGIAFGATADNRNAESSVIVMADKFEVV
                     KNAQDGTPVRLFGVVENKVAINGNLIATGSISGDHINANSVRTAVLTAGAIKTEHLAA
                     GQISADKLAIGLGGNLLVNPIFATPDLSIAPFGWNYWRGEVGDRLNIDTRTIFNRNEQ
                     DNYGLKNGGLPNELVFSMRYSTTKETSDTGRIGWLSQDINVVPNKKYIASVWLACHRG
                     QAKLVIENIEKPGGAYLGRIGNSEVITGYSAHQGEFKNMKRVKVVFTAPTSGCIRFAL
                     RLDNIQGKA"
BASE COUNT          264 a          151 c          212 g          232 t
ORIGIN      
        1 ctacccatac catcaaaacc gaaaccattg ccggtggacg caaagcgatt gccggtattg
       61 catttggtgc aacggcagat aaccgtaatg cggaatcttc tgtgattgtg atggcagata
      121 aatttgaggt cgtgaaaaac gcccaagacg gcacgccagt aagactattt ggcgtggtag
      181 aaaataaagt agcgattaat gggaatttaa tcgcaacagg ctcgatttca ggagaccaca
      241 tcaatgcaaa ttccgtcaga actgctgtat tgactgcagg agcgattaaa acggagcatt
      301 tggcagcagg gcaaatatcg gcggataagt tagcgattgg gctaggtggg aatttgctgg
      361 ttaatcctat ttttgcaaca cccgatttgt caatagctcc gtttggctgg aactactggc
      421 gaggagaagt tggtgatcgg ctaaatattg acacccgtac tattttcaat aggaatgaac
      481 aagataatta cggactaaaa aatggaggac taccaaatga gttagtattt tcgatgcggt
      541 atagcactac aaaggaaacc tctgatactg ggcgaattgg gtggttatct caggatatta
      601 atgttgtgcc taataaaaaa tatattgcct ccgtatggtt agcttgtcat cgtgggcaag
      661 ctaaattagt cattgagaat atcgaaaaac ctggtggtgc ttatttaggt cggataggca
      721 acagcgaggt aattactggc tatagtgctc atcaaggcga atttaaaaat atgaaacggg
      781 ttaaggttgt atttactgca cctacttcag gctgtattcg tttcgcatta cgattagata
      841 atattcaagg taaagctaa
//
LOCUS       DANMCL010000196          802 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.202, whole genome shotgun sequence.
ACCESSION   DANMCL010000196 DANMCL010000000
VERSION     DANMCL010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.202"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            24..647
                     /gene="tetR(H)"
                     /locus_tag="PXF40_002738"
     CDS             24..647
                     /gene="tetR(H)"
                     /locus_tag="PXF40_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance transcriptional
                     repressor TetR(H)"
                     /protein_id="HDL5804006.1"
                     /translation="MAKLDKEQVIDNALILLNEVGIEGLTTRKLAQKIGVEQPTLYWH
                     VKNKRALLDALAETILQKHHHHVLPLPNETWQDFLRNNAKSFRQALLMYRDGGKIHAG
                     TRPSESQFETSEQQLQFLCDAGFSLSQAVYALSSIAHFTLGSVLETQEHQESQKEREK
                     VETDTVAYPPLLTQAVAIMDSDNGDAAFLFVLDVMISGLETVLKSAK"
     gene            complement(650..787)
                     /locus_tag="PXF40_002739"
     CDS             complement(650..787)
                     /locus_tag="PXF40_002739"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804007.1"
                     /translation="MPENGVIFSDGIEDDYLQFNAGCIAHIGIADIQGQLISQKGRQR
                     I"
BASE COUNT          252 a          147 c          169 g          234 t
ORIGIN      
        1 gctattttat tttgaggtag gtaatggcaa agctagataa agaacaagtt attgataatg
       61 cgttgatttt acttaatgaa gttggtattg aaggattaac aacgcgtaag ctggcgcaaa
      121 aaataggtgt ggaacaaccc acattgtatt ggcatgtaaa aaataaacgc gctttgttag
      181 atgcattagc agaaactatt ttgcaaaagc accatcatca tgttttgcca ttgccgaatg
      241 aaacatggca ggactttttg cgaaataacg cgaaaagctt ccgccaagcc ttattaatgt
      301 atcgtgatgg tggcaaaatt catgcgggaa cacgcccctc tgaaagtcaa tttgagacat
      361 cagaacagca actacagttt ttgtgtgatg ctgggtttag tctatctcaa gccgtgtatg
      421 cattaagctc tattgcgcat tttacattag gctccgtact ggaaactcaa gagcatcaag
      481 aaagccaaaa agagcgtgaa aaagtagaga cggatactgt tgcctatccg ccattattaa
      541 cccaagccgt tgcaattatg gatagtgata atggtgatgc tgcatttttg tttgtccttg
      601 atgtgatgat ctctggactt gaaacagtat taaagagcgc taaataaatc taaattcgct
      661 gacgcccttt ttggctaatt agttgccctt gtatgtcagc gataccaatg tgagcaatac
      721 aacctgcatt aaattgtaaa tagtcatctt cgatgccatc agagaaaatt acgccattct
      781 ctggcatcaa agatcctaat tg
//
LOCUS       DANMCL010000197          802 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.203, whole genome shotgun sequence.
ACCESSION   DANMCL010000197 DANMCL010000000
VERSION     DANMCL010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 802)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 802)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..802
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.203"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(340..>802)
                     /locus_tag="PXF40_002740"
     CDS             complement(340..>802)
                     /locus_tag="PXF40_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804008.1"
                     /translation="GDRNYQLYIDLATGELVSKLGKGLTTREFDAAVKAFENAFNAKD
                     TAENTSPAESKETEQENKQETTKLVITKPTLKGSEKQIAWADEIINLFIAKIGDTSIP
                     VTATQEQITQAQAMVDNFFAMTNAGKWIEKFKGLNDSSEPKQFWLSVKYGW"
BASE COUNT          186 a          172 c          144 g          300 t
ORIGIN      
        1 gtattgatag tatccaagcc aaaacgcccc ctgacaatca aaaggcatcc cgtctttagg
       61 gtcctcgagg tcgcctggta ttttatccat taatcttgct atctctccat tgttaataga
      121 tagctctctg cgactagaga taaaccctat ccctcttata gggtatctca agattattgt
      181 ctgtacgttt gttggcacat cgtcaccata agtagcagcg acaatttgcc cgataatgcg
      241 cataatttgt ggtgttactt gtgtagtcat aataatctcc agttatctgt ttgttttagc
      301 cgtaagcctt tgctcttacg gcttatttgt tatctcaatc taccatccat attttacgga
      361 taaccaaaat tgctttggtt cgctactatc atttagacct ttaaattttt cgatccactt
      421 tccagcgttt gtcattgcaa aaaaattatc taccattgct tgagcttgag taatttgttc
      481 ttgcgttgct gttactggga tagaggtatc accaatcttc gcaataaaaa gattgatgat
      541 ttcgtctgcc caagcgattt gtttttcaga gccttttaat gttggttttg tgattacaag
      601 cttagttgtt tcttgtttgt tctcttgctc tgtttctttg ctttctgctg gcgatgtatt
      661 ttcagcggtg tctttagcat taaaagcgtt ctcaaatgct tttacggcag cgtcgaactc
      721 tcttgttgtt aatcctttgc caagtttgct cactaactca cctgtggcta agtcaatgta
      781 caactgataa ttccgatcac ct
//
LOCUS       DANMCL010000198          801 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.204, whole genome shotgun sequence.
ACCESSION   DANMCL010000198 DANMCL010000000
VERSION     DANMCL010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..801
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.204"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            455..>801
                     /locus_tag="PXF40_002741"
     CDS             455..>801
                     /locus_tag="PXF40_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HDL5804009.1"
                     /translation="MEGEYKLKADVTIYHDTPYTKVLFGSTYIEILDDDQYYFSILEK
                     RRWKLENLPDELVDVLKEYNLFVKTYIHEYENTELEKNIYLIESLIDSKSHKTPIDIQ
                     KQLSSTKILLLGVG"
BASE COUNT          269 a          114 c          129 g          289 t
ORIGIN      
        1 taatgattaa tcccttcttg tttggatagt tactctattt ttgaagaaca ttccgtattt
       61 ttaatgatgt tttataagca ggatataaaa tttttaatat ttcaaataaa aagtgagcta
      121 aaaaagattt taactcactt tcatttcgta ggctcaaatt agacctacta cgccgatata
      181 aaaagttggt ctttttatat caaagctaag ctcttaacaa cgagtagtag attctctaat
      241 atgtttagct gtaactttca ttggcttttg ttgcgctgta gtgtttttca tattgttctc
      301 cagattttgt gagtaattag taagaccttt tcttttgaaa aggaccgagc tttcaaagtg
      361 gtctgattac ctattgagca atcagcttgc ttttcaagcc ccatgtcatt atatcataac
      421 cattgttttt agtcaatacc attttgggga atgcatggaa ggcgagtaca aattgaaggc
      481 tgatgtcacg atctatcatg atacgcctta tacaaaagtt ctctttggaa gtacatatat
      541 tgagatttta gacgatgacc agtattactt ttcgatttta gaaaaacgaa gatggaagtt
      601 agaaaattta cctgatgaat tagttgatgt actaaaagag tataatcttt ttgttaaaac
      661 gtatattcat gaatatgaga atacagaatt agaaaaaaat atatacttaa ttgagagttt
      721 aattgattca aaatctcata aaacaccaat agatattcaa aaacaactat cgtctactaa
      781 aattctccta ttaggagttg g
//
LOCUS       DANMCL010000199          780 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.205, whole genome shotgun sequence.
ACCESSION   DANMCL010000199 DANMCL010000000
VERSION     DANMCL010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.205"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>780
                     /locus_tag="PXF40_002742"
     CDS             <1..>780
                     /locus_tag="PXF40_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5804010.1"
                     /translation="TLKTLSRDDLSAEERTTKTIDSVKLRIYLNEQARNRKNYINGFV
                     PTDWIPEITDQMTKSKNLWLKYEEEAKTTLKPYQEETISRVIQDEINKKMAEIGTTTL
                     EIGGKEHELEDLENQINALALTDEEKLAEDVENDLISKLDEAKAALAKNQQTLKEKRD
                     ELLGLNNKLDSSPLVKKGKNALAEGTNAFASGENAIAFGTDSQATGNNAIALGANSKA
                     NAESAIAIGKGAQALKEKALALGENAIANRASAIAIGDNHS"
BASE COUNT          319 a          134 c          147 g          180 t
ORIGIN      
        1 aaacattaaa aactttatct agagatgact taagtgcaga ggaacgtaca accaaaacaa
       61 ttgactccgt taaattaaga atatatctca atgaacaagc acgaaatcgt aaaaattata
      121 ttaatggatt tgtacctacc gattggattc ctgaaattac agatcaaatg acaaaatcca
      181 aaaatctatg gttaaaatat gaagaggaag ccaaaacaac attaaaacca taccaagaag
      241 aaacaatatc tagggttata caagatgaaa ttaataaaaa aatggctgaa ataggtacta
      301 caacactaga gattggtggt aaagaacacg agctcgagga tcttgaaaac caaattaatg
      361 ctttagcttt aactgatgaa gaaaaacttg cggaagatgt ggaaaatgat ttaatctcaa
      421 agcttgatga ggctaaagca gccttagcaa aaaaccagca aacgctcaaa gaaaagcgtg
      481 atgaattact agggctaaat aacaaattag atagctcacc acttgttaaa aaaggtaaaa
      541 atgcacttgc agaaggcacg aatgcctttg cttctggtga aaatgccatc gcattcggca
      601 cggattcaca agctacaggt aataacgcta tcgcactagg tgcaaattca aaagcaaacg
      661 cagaaagtgc gattgcaatt ggtaaaggtg cacaagcatt aaaagaaaaa gcccttgctt
      721 taggcgaaaa tgccattgcc aacagagcat ctgctattgc gattggtgat aaccattcat
//
LOCUS       DANMCL010000200          763 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.206, whole genome shotgun sequence.
ACCESSION   DANMCL010000200 DANMCL010000000
VERSION     DANMCL010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 763)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.206"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>763
                     /locus_tag="PXF40_002743"
     CDS             <1..>763
                     /locus_tag="PXF40_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5804011.1"
                     /translation="VDQLATDLKTKIETDFPNINFSNEKYKDLIKGYSNIQGNLVTAI
                     PNFLEKVNNDFAISARNRDLYSHYLPYQGIDDWENSNFNFRTLNGVYYDDNLTSTELL
                     RKFMIQRDYNTLYALSSARTGNADSLAKNYHLVVAKMSYENLKKELSKKPDSTFNKLK
                     KLYETNGEFLNEYILDNFRGNPLELLTVPALKESLENQESFPSRLYQKFNIFNQAIAQ
                     TTSNITKEEIDDLEKTVENFNNFKNSIDYDSDAWIF"
BASE COUNT          295 a          121 c          114 g          233 t
ORIGIN      
        1 gtagatcaat tagcaacaga cttaaaaact aaaattgaaa ctgatttccc taatattaat
       61 ttttcaaatg aaaaatataa agatctcatt aaaggttata gcaatattca aggtaactta
      121 gtaacagcca ttcctaactt cctggagaaa gttaataatg attttgctat aagtgctaga
      181 aatagagact tatatagtca ctaccttcct tatcagggta ttgatgattg ggagaattct
      241 aattttaact ttcgaacact aaatggagtt tattatgatg ataatctaac ttcaacagaa
      301 ctcctgcgaa aatttatgat tcaaagagat tataacactc tttatgctct aagttctgct
      361 cgcacaggaa atgctgatag tctggctaaa aattaccatc ttgtagttgc gaaaatgtcc
      421 tatgaaaacc tgaaaaaaga attatccaag aaacccgact ctacatttaa taaactgaaa
      481 aagctgtatg aaaccaatgg tgaattctta aatgaatata ttttagacaa tttccgagga
      541 aatccacttg aattattaac agtacctgcg cttaaagaaa gtttagaaaa ccaagagtca
      601 ttccctagca ggctgtatca gaaatttaat attttcaacc aggctattgc acagaccaca
      661 tcaaacatta ctaaagaaga aattgatgat ttagaaaaaa ctgtagaaaa tttcaataac
      721 ttcaaaaatt caattgatta tgatagcgat gcgtggatct tta
//
LOCUS       DANMCL010000201          728 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.207, whole genome shotgun sequence.
ACCESSION   DANMCL010000201 DANMCL010000000
VERSION     DANMCL010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.207"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            2..>728
                     /locus_tag="PXF40_002744"
     CDS             2..>728
                     /locus_tag="PXF40_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HDL5804012.1"
                     /translation="MSKNRLEQILLFLKNHNIATVEQLVKVTEASPATIRRDLIKLDE
                     EGVVIRTHGGVSLNQFIPFQPTTNEKQFKQIVEKERIAEYAVSLISPGNSILLDAGTT
                     TLCIAKKIAHMPLRVITTDLHIALLLSEYKQIELIITGGRVDNSSQSCIGNHSLTLLE
                     NINPDIAFVSCNSWSLEKGVTAPTEEKANLKRMLQQNAKQKVLVADSSKYGKYSLFRA
                     TQLDNFTQIITDKGLPIEYSQALS"
BASE COUNT          264 a          135 c          124 g          205 t
ORIGIN      
        1 tatgtctaaa aaccgtctag aacaaatttt actattccta aaaaaccaca atattgctac
       61 cgtagagcaa ctggtaaaag tgactgaggc ttctcctgca actatccgcc gtgatttaat
      121 aaaattagat gaagaaggcg tcgtgattcg cacacacgga ggggtcagct taaaccaatt
      181 tataccgttt caaccaacaa caaatgagaa gcaatttaag caaattgtcg aaaaagaacg
      241 catagctgaa tatgccgttt cgcttatttc accgggaaat tctattttat tagatgctgg
      301 cactacaacg ctatgcattg cgaaaaaaat cgctcatatg ccacttcgag tgattacaac
      361 tgatctacat attgctttat tactctctga atataagcaa atagaattaa ttattacagg
      421 gggacgagta gataatagta gtcaatcttg tattggtaat catagtttaa ctttattaga
      481 aaatattaat cctgatattg cttttgtgag ctgtaattct tggagcttag aaaaaggagt
      541 tacagcacct acagaagaga aagctaattt aaaaagaatg ctccaacaaa acgccaaaca
      601 aaaagtactg gttgccgata gcagcaaata tggaaaatac tctttatttc gtgcaactca
      661 actcgataac tttacacaaa ttatcacaga taaaggacta cctattgaat atagccaagc
      721 cttgtcaa
//
LOCUS       DANMCL010000202          682 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.208, whole genome shotgun sequence.
ACCESSION   DANMCL010000202 DANMCL010000000
VERSION     DANMCL010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 682)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 682)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..682
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.208"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
BASE COUNT          232 a          118 c          100 g          232 t
ORIGIN      
        1 atctcttcgt gcatcagaac gattgatttt aattgagatt tattatactg ataacgttcc
       61 aagttgtcgc caacataacc tattatataa tgattattca tttttgcccc tttagtttcg
      121 aacaggttct tttttgtcgt taaatatgaa atttatgatt acaatgatcg atatagatat
      181 aacaataaat aaaaattaca gtgtaataaa cattactata tattttatat tgtcattcat
      241 ttttcaccca tttttaaaag ttaatatttt aagtgcccaa taaacatata tatcaaagtt
      301 atctggttac tatcattcgt gtattgtaat ctcgcaattc aacatcacta ataaaaaatt
      361 ctccaacata ttcagagagt tttttctact gataccaact aaattttggt tcaatactcg
      421 aagttaaatt tggttcagag aaaaaagcct ctaaatggca aaagggtaag gggccctaac
      481 gggcaagggt aatcccctaa gggggataag agtaaccttt ccaaggggaa aggtcttacc
      541 caaaagggca aagggctaaa cggctttctt tcaacgcaaa catcatcttt ttcggtctat
      601 ttcaatgcac tcaattctca aaaaaattct tggcaaaagt aaatcctcgt ctcaaagttc
      661 ggttaaatct gacaatgttt tc
//
LOCUS       DANMCL010000203          681 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.209, whole genome shotgun sequence.
ACCESSION   DANMCL010000203 DANMCL010000000
VERSION     DANMCL010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 681)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 681)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..681
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.209"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..>681)
                     /locus_tag="PXF40_002745"
     CDS             complement(<1..>681)
                     /locus_tag="PXF40_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804013.1"
                     /translation="GISPELIKKSVKDCSRDREKISHCTLLNACSKALGFSGGFAGFQ
                     EDYLSNLTQFMEKHGLLYLVDLTKQKYPVNDMCMTRSLALKKQDISERIFFSGKEIPK
                     RIFTGFNFRYDMHLANGFRIGNSLKTPYSDIGICEDINEALKNPSIKIDCRDGTIRSM
                     ADVVIGRYLDKVLFYYFNLIGDQLVQPRLDKYEIQCYYPQGYQGDINNDLALHKKFLD
                     FFVSRIEF"
BASE COUNT          229 a          120 c           88 g          244 t
ORIGIN      
        1 aaaattcaat tcttgataca aaaaaatcta aaaatttctt atgtagagct aagtcattgt
       61 taatatcccc ttgataacct tgagggtaat aacattgtat ttcatattta tccaatctag
      121 gctggactaa ctgatcacct atcaagttaa aataataaaa caatacttta tcaagatatc
      181 tacctatgac tacatctgcc atacttctga ttgtgccatc acggcaatca atttttattg
      241 atggattttt taatgcttca tttatgtctt cacatatacc tatgtcagaa tatggggttt
      301 ttaaggaatt tccgatacga aaaccattag ctaaatgcat atcatatcgg aaattaaatc
      361 cagtaaatat tctcttaggg atttcctttc cgctaaagaa aattctttca gatatatctt
      421 gctttttcag agctaagctc cttgtcatgc acatatcatt tactggatat ttttgttttg
      481 ttaaatctac aagatataag agcccatgtt tttccatgaa ttgcgtcaaa ttagataaat
      541 aatcttcttg aaaccctgca aagcctccag aaaatcctaa agcttttgag caagcattta
      601 acaaagtaca gtgagaaatt ttttctctat ctctagaaca atctttaaca gattttttaa
      661 ttaattctgg ggaaatacca t
//
LOCUS       DANMCL010000204          662 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.210, whole genome shotgun sequence.
ACCESSION   DANMCL010000204 DANMCL010000000
VERSION     DANMCL010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.210"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(19..303)
                     /locus_tag="PXF40_002746"
     CDS             complement(19..303)
                     /locus_tag="PXF40_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010128390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804014.1"
                     /translation="MANITLSHITPKHFFETVRLLKMQEHRIYIGVDSIEVRFKQKRF
                     ESKKETDKRLEQLEHFMLFLQEIINSDIPIDLDEFIYTYHRSVRRGFYRR"
     gene            complement(321..482)
                     /locus_tag="PXF40_002747"
     CDS             complement(321..482)
                     /locus_tag="PXF40_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007525341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HDL5804015.1"
                     /translation="MEKIENSSNLVLKLSLENQMLILESLEHPKEPNLVMLEALKKYS
                     LYVAKTSNK"
BASE COUNT          206 a          118 c          104 g          234 t
ORIGIN      
        1 cactcctctt tcacatcact aacgtcgata aaaacctctc cttactgacc tgtgataggt
       61 gtatataaac tcatctaaat ctataggaat atctgaatta atgatttctt gtagaaagag
      121 cataaaatgc tctaactgtt ctagtctctt atctgtttcc ttttttgact caaaacgctt
      181 ttgcttaaaa cgaacttcta tcgaatctac accgatgtaa attcgatgtt cctgcatttt
      241 gagtagtcgg acagtttcaa aaaaatgttt aggggtgatg tgagaaaggg ttatatttgc
      301 catagtttag cttgaaaacg ctatttatta cttgttttag caacatacaa agaatacttt
      361 tttaaagcct ctagcattac taaattaggc tctttaggat gttctaagct ctcaagaatt
      421 agcatttgat tttcaagaga aagctttaga acaagatttg aactattctc tattttttcc
      481 attttaatta tctcattaga tgactttcgc ataacaacag gttatgtgta aattctcgtg
      541 cagtgggaca agcccgattg tactgcactc gaattgtaac ataacctgta ggacattatg
      601 cgaaaattaa taatataagt ttttcatcaa tcggcggtat tattgaatac gccatcacat
      661 ct
//
LOCUS       DANMCL010000205          644 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.211, whole genome shotgun sequence.
ACCESSION   DANMCL010000205 DANMCL010000000
VERSION     DANMCL010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.211"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>644
                     /locus_tag="PXF40_002748"
     CDS             <1..>644
                     /locus_tag="PXF40_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HDL5804016.1"
                     /translation="EIEQTRAAYDRLKRSGVASQNELRRASEATKQRVRELNAELGKT
                     SFGDKAKGFGRGLMSAGVGIAAGAAMARQPAKNQMEFDRQLAMASNTAFSDRDVKGRI
                     EGKKELLAAVQEAVKVGGGTKEDALLTLDTLIASGTMKAETAMSLLPTLQKGAVATGA
                     SSEDMAKIAISSMQQFGIKEEDIGRALDMAVAAGQAGNFELADMARWLPQQMAAG"
BASE COUNT          184 a          129 c          190 g          141 t
ORIGIN      
        1 gaaattgaac aaactcgtgc agcctatgac cgcttaaaac gctcaggtgt tgcctctcaa
       61 aatgagctac gccgtgcctc agaagccact aagcaacggg tgcgagagct gaatgcagaa
      121 ttgggtaaga caagctttgg ggataaggct aaaggatttg ggcgtggttt gatgagtgcc
      181 ggtgtcggta ttgcagcagg tgctgcaatg gctcgtcagc cagccaagaa ccaaatggag
      241 tttgaccgac agttagcgat ggcatcaaac actgcctttt ccgaccgtga tgttaaaggg
      301 cgtattgagg gcaagaaaga gttattagca gcggtgcaag aggcggttaa ggttgggggt
      361 ggaacaaaag aagatgctct tttaactctt gatacgctaa ttgcctcagg aacgatgaag
      421 gctgaaactg caatgagcct attaccaacc ttgcagaaag gtgctgtagc aacaggtgca
      481 agctccgagg atatggcaaa aattgcgatc tcctcaatgc aacaatttgg gattaaagaa
      541 gaggatattg ggcgggcatt ggatatggca gttgcagccg ggcaagcagg taactttgag
      601 cttgcagata tggctcgctg gctaccacaa caaatggccg cagg
//
LOCUS       DANMCL010000206          643 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.212, whole genome shotgun sequence.
ACCESSION   DANMCL010000206 DANMCL010000000
VERSION     DANMCL010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.212"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(109..>643)
                     /locus_tag="PXF40_002749"
     CDS             complement(109..>643)
                     /locus_tag="PXF40_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5804017.1"
                     /translation="NNLAAISANLGKVTAGTITGTTITGNTISGGSINGTTISGTTIS
                     GGTIKGARLEGATGKFTGELEVSQLIGGGVIEQVTGKLKYSHRNRIYEGQEHGENSSS
                     PIYRHEYIYKATVTINAAPTRRYIEIIGSESFILEANQSITKTIEKSLNRNASGSSLD
                     FIVLAYSISTAKYISIS"
BASE COUNT          178 a          131 c          114 g          220 t
ORIGIN      
        1 tcgatagttg aaataaaaac aatcgcctga attgacctgc aagcggttgg ttttggatat
       61 ttaaaaaagc tgtggctatc cgcactcagt actacattga ggcgataact aactgataga
      121 gatatattta gccgtcgaaa tggaataggc taaaacaata aaatctaaag agctaccact
      181 tgcatttcta tttaatgatt tctctattgt ttttgtgatt gattgatttg cttctaaaat
      241 gaatgactca cttccgatga tttcaatata cctccttgtc ggcgctgcat ttatggtgac
      301 agttgcttta tagatatatt cgtgtctata aattggagag gaggagtttt ctccatgttc
      361 ttgcccctca taaatgcgat tacgatgtga atattttaat ttgcctgtaa cctgctctat
      421 aacacctccc cctattaatt gagatacttc aagttcgccg gtaaatttgc cagtagcccc
      481 ctccaatctt gcacccttta ttgtgccgcc agagatagtt gtaccgctaa ttgttgtacc
      541 attaatactt ccgccactaa ttgtattacc agtaattgtc gtacctgtaa ttgtaccagc
      601 agttacctta ccaagatttg ccgatattgc cgctaaattg ttt
//
LOCUS       DANMCL010000207          642 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.213, whole genome shotgun sequence.
ACCESSION   DANMCL010000207 DANMCL010000000
VERSION     DANMCL010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.213"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..>642)
                     /locus_tag="PXF40_002750"
     CDS             complement(<1..>642)
                     /locus_tag="PXF40_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804018.1"
                     /translation="YHFRNLINGLEDIIQILNSSELSLFNGKVLVLTGQAGSGKSHLL
                     GDFVQKRQNSGKYSLLLLGQDFTEKSNAWNQILSKQLNLNITPEVFLSALDSIGEMQK
                     ERVILAIDALNEGEGKSLWNNQLNGLIELVSQYPNIGLVLSVRDSYQDIIFNKLNIKN
                     QDKLCYIKHTGFIDNEFEAIQIFFPYYGLQLPSIPLLNPEFSNPLYLKLFCESL"
BASE COUNT          229 a          108 c           83 g          222 t
ORIGIN      
        1 caaagattca caaaataatt ttaaatataa tgggttggaa aattctggat taagcaaagg
       61 aatgcttggt aattgcaagc cataataagg aaaaaatatt tgaatggctt caaattcatt
      121 atctataaac cctgtgtgct tgatataaca caatttatcc tgatttttaa tatttaattt
      181 attaaaaata atatcttggt agctatctcg cacactcaga accagtccaa tatttggata
      241 ttgacttacc aactcaatta atccattaag ttggttattc cataatgatt tcccttcacc
      301 ctcatttaag gcgtctatgg ctaaaataac ccgttctttt tgcatttctc cgatactatc
      361 taatgcggat aaaaatactt cgggtgtgat attaagattt aattgtttgg ataagatttg
      421 attccaagca ttggattttt ctgtaaaatc ctgccccaat aacaacaaag aatactttcc
      481 agaattttgt cttttttgga caaaatcacc caataaatga gattttccac taccagcttg
      541 accagttaaa acaagcactt taccattaaa taatgataat tcagatgaat ttaaaatctg
      601 aataatgtct tccaaaccat taattaaatt tctaaaatga ta
//
LOCUS       DANMCL010000208          641 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.214, whole genome shotgun sequence.
ACCESSION   DANMCL010000208 DANMCL010000000
VERSION     DANMCL010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 641)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 641)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..641
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.214"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..296
                     /locus_tag="PXF40_002751"
     CDS             <1..296
                     /locus_tag="PXF40_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804019.1"
                     /translation="DTRYNKNGQGAVSERNIIDAKNRFKASHPYAKIISCVRGSETYV
                     TRPAKANATTKSVKEKQSQPQESSSLSSMLLGAAVTAGVGFVANKWFSKKDNT"
     gene            324..>641
                     /locus_tag="PXF40_002752"
     CDS             324..>641
                     /locus_tag="PXF40_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804020.1"
                     /translation="MAGLLPPYFKKKNSDHYKDAVKQFGKEQVDEVIAQCDELESWVK
                     EMPTKQLIMYVGCFHTFNKLSQSKAYVQENFPNVLENPFLFQTLSAASHNELKINRGY
                     KFKE"
BASE COUNT          238 a          105 c          116 g          182 t
ORIGIN      
        1 cagataccag atataacaag aatgggcaag gtgctgtttc tgaaagaaat attatagatg
       61 ctaaaaatcg ttttaaagcg agccatccat acgcaaaaat tatttcttgt gttagagggt
      121 ctgagacata tgtaacacgt ccagcaaaag ctaatgctac aacaaaatct gtcaaggaaa
      181 agcaatctca accacaagaa agttcatcgc tcagttcaat gttacttggt gcggctgtaa
      241 ctgctggggt tggttttgta gccaataaat ggtttagcaa aaaagataac acttaattta
      301 tctctaacca atgtggagta aaaatggctg gattattacc accttatttc aaaaagaaaa
      361 atagtgatca ctataaagat gctgtaaaac aatttgggaa agaacaagtt gatgaggtta
      421 tagcacagtg tgatgaactt gaatcttggg taaaagaaat gccaacaaaa caacttatta
      481 tgtatgttgg ttgtttccat acttttaaca aattatctca atctaaagct tatgttcaag
      541 agaactttcc aaacgtactg gaaaacccgt ttcttttcca aacactttcg gcagcgtctc
      601 ataatgaact taaaataaat cgaggatata aattcaaaga a
//
LOCUS       DANMCL010000209          628 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.215, whole genome shotgun sequence.
ACCESSION   DANMCL010000209 DANMCL010000000
VERSION     DANMCL010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.215"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..514
                     /locus_tag="PXF40_002753"
     CDS             <1..514
                     /locus_tag="PXF40_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804021.1"
                     /translation="DESERIISASIEFSNYFANKYSENIEEGIKNAEKEFKKNYNKSL
                     RYNAKKAQQRVQKYVEKVNQKNPQALKDLDNISNLKKINENLKKAAKFTGIISSIKDY
                     YDLAEGFRNGIKSNDWEPFLKTSAQIGASALMSMLVASMITGPTTIGSIIISAAFISI
                     GGYIISLASR"
BASE COUNT          260 a           89 c          101 g          178 t
ORIGIN      
        1 agatgaatca gagaggatta tatcagccag tattgaattc agtaactatt ttgctaataa
       61 gtactctgaa aacattgaag aaggcattaa aaatgcagaa aaagaattta aaaagaatta
      121 taataaaagt ctaagatata atgctaaaaa agcacagcag agggtgcaaa aatatgtcga
      181 aaaagtcaac caaaagaatc ctcaggcact aaaagatctc gataacatat ccaacttaaa
      241 aaaaattaat gagaatttaa aaaaagcagc aaaatttact ggtattatta gcagtattaa
      301 ggattattac gatctagcag aagggtttag aaatggcata aagtctaatg attgggaacc
      361 ttttttaaag acatctgctc agataggtgc ttcagcttta atgagtatgt tagtagcctc
      421 aatgataaca ggcccaacga caattgggag tattattatt agtgctgcat ttatttctat
      481 agggggatat attatttcac tagcttcccg ttagatagtc tttgttatac tcaataacct
      541 actatactac ctataggcta ttgaactatc atacatcagc tctattaacc aaaaaaacaa
      601 aaaaaaatat tgcaaataaa aataaaat
//
LOCUS       DANMCL010000210          600 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.216, whole genome shotgun sequence.
ACCESSION   DANMCL010000210 DANMCL010000000
VERSION     DANMCL010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.216"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>600
                     /locus_tag="PXF40_002754"
     CDS             <1..>600
                     /locus_tag="PXF40_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine methyltransferase"
                     /protein_id="HDL5804022.1"
                     /translation="YFETNRNQPLYTFRDVKANSFVIYPYVKKDKKIELINISILKEK
                     YPYGFAFLTKVKSKLLQRNIWPPIMENDWYKYGRHQALENCDSAPKIIVGILSKGYKY
                     SVDHEGVFISSGGTAGYSLINIPNDCLYSIYYIQAILSSKYSEWFVSLSGEVFEGGFI
                     ARGTKVQKQIPIPNINFNNPAERLTHDEISDLQKELNQLF"
BASE COUNT          231 a           87 c           90 g          192 t
ORIGIN      
        1 tattttgaaa ctaatagaaa tcaaccctta tatactttta gagatgtcaa agctaatagt
       61 tttgtaattt acccttatgt aaaaaaagat aaaaaaatag aattgattaa tatctccata
      121 ttaaaagaga aataccctta tggatttgct tttctaacaa aagttaagtc aaaattatta
      181 caaagaaata tatggccccc gataatggaa aacgattggt acaaatacgg tcgccatcaa
      241 gctttagaga attgcgactc cgcccctaaa attattgttg gcattctatc aaaaggatat
      301 aaatatagtg ttgatcatga aggggtattt atatcatcag gtggaactgc tggatatagt
      361 ttaattaata ttccaaatga ttgtttgtat tctatatatt atatacaagc aattttatca
      421 tctaaatatt cagagtggtt tgtttcttta tcaggagaag tatttgaggg tggctttatt
      481 gctagaggaa caaaagtcca aaaacaaata ccaatcccta acataaactt caataaccca
      541 gcagaaagat taactcacga tgaaatatca gatttacaaa aagagttaaa tcaacttttc
//
LOCUS       DANMCL010000211          593 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.217, whole genome shotgun sequence.
ACCESSION   DANMCL010000211 DANMCL010000000
VERSION     DANMCL010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.217"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..>593)
                     /locus_tag="PXF40_002755"
     CDS             complement(<1..>593)
                     /locus_tag="PXF40_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015483985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5804023.1"
                     /translation="RILVDAYYEDGTTGGGEFVADLQDLVTPDDGGVCFVVNNNGGRW
                     KRVDLSHLTLFDFWAVGDGVTNDESAFVNAMRYSQFFIENGTFRINNAVNSVRDNVKI
                     LGNKTGKLVLGAGIQQAGAEVFNINHSNYFISGFCIETPNKAIGIRFKSLDDAGVKNL
                     HIDNVVFNGTFYGVRAGESIQADTNYPTDNVIVQNCQS"
BASE COUNT          193 a          150 c           89 g          161 t
ORIGIN      
        1 gattggcagt tttgtacaat cacattatca gttgggtaat tagtatccgc ctgaatactt
       61 tcacctgccc tgaccccgta gaaggtgcca ttaaacacaa cattgtcaat atggagattt
      121 ttaacaccag catcatccaa agacttaaat cgaataccaa ttgctttgtt cggtgtttca
      181 atacaaaaac ccgagataaa ataattgctg tgattaatat taaaaacttc ggcccctgct
      241 tgctggatac ctgcacctaa tactaatttg ccggtcttat tgcccaaaat tttcacatta
      301 tcgcgaacag aattaacggc attgttgata cgaaatgtac cgttttcgat aaaaaattga
      361 gaatatctca tagcatttac aaatgctgat tcatcatttg ttaccccgtc accgacggcc
      421 caaaaatcaa ataatgtaag atgtgaaagg tcaacacgct tccaccgccc cccattatta
      481 ttcacaacaa aacaaacccc accatcatca ggcgtaacta aatcctgcaa atcagccaca
      541 aactccccac cgcctgttgt gccgtcctca tagtaagcat ccaccaaaat acg
//
LOCUS       DANMCL010000212          583 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.218, whole genome shotgun sequence.
ACCESSION   DANMCL010000212 DANMCL010000000
VERSION     DANMCL010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..583
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.218"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..474
                     /locus_tag="PXF40_002756"
     CDS             <1..474
                     /locus_tag="PXF40_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HDL5804024.1"
                     /translation="CTGIRRGQLVKLKIGDVNLSNRTIYISPEINKNHDYHIVPISDS
                     LYPHIERLIQELKIHKQTDDCQLFNLNLFSRYTRRKGQPMSQNQLTHIFRHISDLVGF
                     TSSPHRFRHTVATQLMKKPENVYVVKKLLGHKDISVTLGYIEYDVEMLRDTVNLL"
BASE COUNT          207 a           92 c          103 g          181 t
ORIGIN      
        1 tgcacaggaa ttaggagagg gcaattggtt aaactgaaaa tcggtgatgt taatttatca
       61 aataggacga tctatatttc accagaaatt aataaaaacc atgattatca tatagtaccg
      121 atatccgatt cactttatcc ccatatagaa aggctgattc aggagttaaa gatccataaa
      181 caaacggatg attgccagtt atttaacctc aatttatttt ctcgttatac tcgtaggaaa
      241 ggtcagccga tgagccaaaa ccagcttact catatattta ggcatatttc cgatttggtt
      301 ggcttcacgt catcaccaca tagatttcgg catacagtag ctactcaatt gatgaagaaa
      361 cctgaaaatg tttatgtagt taagaaatta ttaggtcata aagatatcag cgttacatta
      421 ggatatattg aatacgatgt ggaaatgcta cgagacaccg tgaacttact ctaataaaag
      481 agaaatgaga gaaaactatt ctctcattta ttgtgataaa taggaaactt ctgtcttatt
      541 ttcagatgaa ttgattttga gaactttatc aaaatataag cgt
//
LOCUS       DANMCL010000213          581 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.219, whole genome shotgun sequence.
ACCESSION   DANMCL010000213 DANMCL010000000
VERSION     DANMCL010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..581
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.219"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..298
                     /locus_tag="PXF40_002757"
     CDS             <1..298
                     /locus_tag="PXF40_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HDL5804025.1"
                     /translation="ACLIYLRKFGYSLGRPYADTVYQSKFPNMKELRIQNKGKPIRAF
                     YAFDPLRQAIVLCAGEKGKDKRFYEKMIALADAEFTSYLNNLEKENENVRSNAQ"
     gene            270..569
                     /locus_tag="PXF40_002758"
     CDS             270..569
                     /locus_tag="PXF40_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HDL5804026.1"
                     /translation="MKTLDQMLNELSPERRQKVEDMAQEMIREIQLSKLREELNLSQQ
                     QLATALGISQPAIAKLEQKDNDPRLSTLKRYIEAMGGKLKLAVELPTGDERVIRI"
BASE COUNT          201 a          107 c          111 g          162 t
ORIGIN      
        1 ggcttgttta atctatctgc ggaaattcgg ttatagtcta ggcagacctt atgctgatac
       61 agtttatcag tctaaattcc ctaatatgaa agagttacgc attcaaaaca aaggtaagcc
      121 aattcgagca ttttatgctt ttgacccttt acgccaagcg atagtacttt gtgctggcga
      181 gaaaggtaaa gacaaaagat tctatgaaaa aatgatcgct cttgctgatg cggaatttac
      241 ctcctattta aataatttag agaaagaaaa tgaaaacgtt agatcaaatg ctcaatgaac
      301 tctctcctga acgccgccaa aaagtggaag atatggctca agaaatgatt agagagatac
      361 aactttcaaa actaagagaa gagctaaatc tctctcaaca acaattagct acagctctcg
      421 gtatttcaca gcctgctatt gctaaacttg aacagaaaga taacgatcca agattatcca
      481 cgctcaaacg ctatattgaa gcaatgggcg gtaagttaaa acttgccgtt gaattgccta
      541 caggcgatga gcgtgtaatt aggatttaat tactttgtta a
//
LOCUS       DANMCL010000214          580 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.220, whole genome shotgun sequence.
ACCESSION   DANMCL010000214 DANMCL010000000
VERSION     DANMCL010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..580
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.220"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..>580)
                     /locus_tag="PXF40_002759"
     CDS             complement(<1..>580)
                     /locus_tag="PXF40_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804027.1"
                     /translation="LMLCSLWFLSACFNESYDFRGKEFEEPVQAILVESDKIYFIGST
                     IDAIFDKTLIDNTKASDVIYFLNKLLQSPYGRKISNHLITLAIYDENIQIQYSPQFIA
                     KNLTMSDIQALQKLGFQFSHSKEYLWKSYAGLGGKITQFKNRKEILEKYKFKQPIIAK
                     AKSYQKSIEFSFDDTISVIAAPITIPASIILFV"
BASE COUNT          186 a           92 c           94 g          208 t
ORIGIN      
        1 tacaaataaa ataatagatg cgggaatcgt aattggtgct gcaatgaccg aaatggtgtc
       61 atcaaagcta aattctatgc ttttctgata acttttcgct ttagcgatta taggttgctt
      121 aaatttatac ttttctagta tttccttgcg atttttaaac tgtgtgattt taccaccaag
      181 acctgcatag cttttccata gatattcttt tgaatggcta aattgaaaac ctaacttttg
      241 tagagcttga atatcgctca tggtgagatt ttttgcaata aattgcggac tgtactgaat
      301 ttgaatattt tcatcataaa tggctaaagt aattaggtga ttactgatct tccttccata
      361 cggactttga agaagtttat tcaaaaaata aataacatct gaagcttttg tattatctat
      421 cagcgtttta tcaaatatcg catcaattgt ggaaccaatg aaataaattt tatctgattc
      481 aaccaaaatt gcttgtacag gttcttcaaa ttcttttcct ctaaaatcat aactttcgtt
      541 aaagcatgcg gagagaaacc atagtgagca gagcattaag
//
LOCUS       DANMCL010000215          575 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.221, whole genome shotgun sequence.
ACCESSION   DANMCL010000215 DANMCL010000000
VERSION     DANMCL010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..575
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.221"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>575
                     /locus_tag="PXF40_002760"
     CDS             <1..>575
                     /locus_tag="PXF40_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HDL5804028.1"
                     /translation="PYNSRQYCDAYHLLENVARWEKPKVYGVARKMDRTSLKSDYCMI
                     AATKAFEELIENADAKYILLSYNNMSDKGNDRSNAKISDEDIMKILSKKGKVIVFESD
                     YKSFSTGKSDIQDNKERLFLCEVFSKEKKKMNISCPFNYIGGKFKLLEQLQPLFNEKE
                     VFLDLFAGGGNVGINSSSSKVIFNDTNENLI"
BASE COUNT          224 a           57 c          108 g          186 t
ORIGIN      
        1 tccatataat tcaagacaat attgtgatgc atatcattta cttgaaaatg tggcacgatg
       61 ggaaaaacct aaagtttatg gtgttgcaag aaagatggat agaacttcgc ttaaaagtga
      121 ttattgtatg attgcagcta caaaagcatt tgaggagctt attgaaaatg ctgatgcaaa
      181 atatattttg ctttcatata acaatatgtc agacaaggga aatgatagat ccaatgcgaa
      241 aatatcggat gaagatatta tgaaaattct tagcaaaaag ggaaaagtaa ttgtatttga
      301 atcggattat aagagttttt caactgggaa atcagatata caagataata aagaaagatt
      361 atttttatgc gaagtattta gcaaagaaaa aaagaaaatg aatatatctt gcccttttaa
      421 ttatattggc ggaaaattta aactattgga acaattacaa cctttattta atgaaaagga
      481 agtattttta gatttatttg ctggtggagg gaatgttggg ataaattcct cttcttcaaa
      541 agttattttt aatgatacga atgaaaattt gatag
//
LOCUS       DANMCL010000216          561 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.222, whole genome shotgun sequence.
ACCESSION   DANMCL010000216 DANMCL010000000
VERSION     DANMCL010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.222"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..498)
                     /locus_tag="PXF40_002761"
     CDS             complement(<1..498)
                     /locus_tag="PXF40_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HDL5804029.1"
                     /translation="MPNFSFTHLYKKHTKELPTVTLLSALIGLSQVSYANPLPLGNTT
                     GTNNLAVGEGSFALGTGSQAIGKNAIATGGNISPQEFNVELENFRDLVNQIEELRTQI
                     AEQEKQGSVNQQLQDALKSQIAQYDTILERVREKQAQQAILANSVISMRKELVNRRNQ
                     LTELEN"
BASE COUNT          155 a          105 c          103 g          198 t
ORIGIN      
        1 attttccaat tctgttaact gatttcttct attaactaat tctttccgca ttgatataac
       61 actattggct aatattgctt gttgtgcttg tttttcacgt acacgctcta aaatagtgtc
      121 atattgagca atctgactct ttaaagcatc ttgtaattgt tgattaacag agccttgttt
      181 ttcttgttca gcaatttgag tacgtaactc ttcaatttga ttaactaaat cacggaagtt
      241 ttctaactcc acattgaatt cctgggggga gatattacca ccggttgcaa tggcattctt
      301 gccgattgct tgagaacctg tgcctaacgc aaaactacct tcacctacag caaggttatt
      361 ggtgccagtg gtgttgccta aaggaagtgg attggcataa gagacttggc taagccctat
      421 cagagcgcta agcaaggtaa cagtagggag ctcttttgtg tgttttttat acagatgggt
      481 gaaactaaag tttggcatat caaaatttcc tcattaaaac ttttactttt cattcttaaa
      541 aaaatgctcc gtgtcataat a
//
LOCUS       DANMCL010000217          553 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.223, whole genome shotgun sequence.
ACCESSION   DANMCL010000217 DANMCL010000000
VERSION     DANMCL010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 553)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 553)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..553
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.223"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>553
                     /locus_tag="PXF40_002762"
     CDS             <1..>553
                     /locus_tag="PXF40_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006247882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HDL5804030.1"
                     /translation="LISLEKDVKRRELFFSQPNTEDFEVFSAINTMSSDWEALNNHFD
                     LALFEQRYGRKTTKGEVGCTLSHLAVYQKIAEDSTIAEDDYCLVCEDDALFADDFQKH
                     LDALLAQNLKVDIILVGQSKIPTFNDSELELNYPSTFGFLQKNIPNSQYKYAYSYLNY
                     FAGTVAYLIKKSTACQFLAQCAG"
BASE COUNT          180 a           88 c          106 g          179 t
ORIGIN      
        1 atttaatttc attagaaaaa gatgtaaaaa gacgagagct attttttagc cagcctaata
       61 cggaagattt tgaggtgttc agtgccatta atacaatgag tagtgattgg gaggcattaa
      121 ataaccattt tgatttggct ctgtttgaac agcgatatgg gcgtaaaacc actaagggcg
      181 aagtaggttg tactttaagc catttagccg tttaccaaaa aattgccgaa gatagcacta
      241 ttgcggaaga tgattactgc ctagtctgtg aagatgatgc cttatttgcc gatgatttcc
      301 aaaaacatct tgatgcttta ttagcacaaa atttaaaagt cgatattatt ttagttgggc
      361 agtcgaaaat tccaactttt aacgatagcg aattagagct taattaccca tcaacctttg
      421 gctttttgca aaaaaatatt ccgaatagcc aatataaata tgcttattct tacctgaatt
      481 attttgctgg tacggttgca tatttaatta aaaaatcgac cgcttgtcag tttttagcac
      541 aatgtgccgg aaa
//
LOCUS       DANMCL010000218          465 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.224, whole genome shotgun sequence.
ACCESSION   DANMCL010000218 DANMCL010000000
VERSION     DANMCL010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 465)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 465)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.224"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(116..191)
                     /locus_tag="PXF40_002763"
     tRNA            complement(116..191)
                     /locus_tag="PXF40_002763"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(156..158),aa:Thr,seq:ggt)
     gene            complement(195..269)
                     /locus_tag="PXF40_002764"
     tRNA            complement(195..269)
                     /locus_tag="PXF40_002764"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(234..236),aa:Gly,seq:tcc)
     gene            complement(313..397)
                     /locus_tag="PXF40_002765"
     tRNA            complement(313..397)
                     /locus_tag="PXF40_002765"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(361..363),aa:Tyr,seq:gta)
BASE COUNT          144 a          107 c          107 g          107 t
ORIGIN      
        1 tttctaaaag cctcttaaac aaaaacggtt acaatggaac aaaagaaccc attaaccata
       61 atgtagaaat taataccaat aaaaatttgc gtgagaaaga tagaattcag agaagtggtg
      121 ctgataggcg gatttgaacc gccgacctca cccttaccaa gggtgcgctc taccaactga
      181 gctatatcag cgcttggagc gggcagcggg aatcgaaccc gcatcattag cttggaaggc
      241 taaggtaata gccattatac gatgcccgct gttctaaatt cgtctgacct acgcgattca
      301 aaatatcaga gatggtggag ggagaaggat tcgaaccttc gaaggctgag ccaacagatt
      361 tacagtctgc cccctttggc cgctcgggaa cccctccacg ataattgaat acttatttac
      421 gcctgagtta atggtgccga ctaccggaat cgaactggtg accta
//
LOCUS       DANMCL010000219          454 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.225, whole genome shotgun sequence.
ACCESSION   DANMCL010000219 DANMCL010000000
VERSION     DANMCL010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 454)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 454)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..454
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.225"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(<1..>454)
                     /locus_tag="PXF40_002766"
     CDS             complement(<1..>454)
                     /locus_tag="PXF40_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HDL5804031.1"
                     /translation="NKGLIYSLNKAINLSSGEYIARMDADDISLPTRLSEQILYLEEN
                     HLDLCGCNALLFSEHGNLGLTNKLNSHEALEKLMVAGDIGIIHPTFLARRKVFVESGG
                     YNPLALHAEDMEFIAHILSMGFRLGNNPKVLFKYRFSTNSVTRRNAFHL"
BASE COUNT          162 a           88 c           57 g          147 t
ORIGIN      
        1 ataaatgaaa agcatttctt ctagtaacgc tatttgtaga aaacctatat ttgaataata
       61 ccttaggatt attccctaat ctaaatccca ttgataaaat atgggcaata aattccatat
      121 cttccgcatg taaagctaag ggattatacc ctccagattc aacaaatact tttctccttg
      181 ctaaaaaagt agggtgaatt attccaatat caccagccac cataagcttt tctaaagcct
      241 catgactatt caacttattt gtaagaccaa ggttgccatg ttcagaaaaa agcaaagcat
      301 tacaaccgca taagtctaaa tggttttctt ctaaatataa aatttgctct gacaatctag
      361 taggtaaaga tatatcatca gcatccattc tcgctatata ttcaccagag gataagttta
      421 tagctttatt taatgaatat atcaacccct tatt
//
LOCUS       DANMCL010000220          431 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.226, whole genome shotgun sequence.
ACCESSION   DANMCL010000220 DANMCL010000000
VERSION     DANMCL010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.226"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>431
                     /locus_tag="PXF40_002767"
     CDS             <1..>431
                     /locus_tag="PXF40_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS481 family transposase"
                     /protein_id="HDL5804032.1"
                     /translation="IFISAGGVRSIWLRHNLANFKQRLNALEKAVAEKGIILSENQVQ
                     ALERKKEDDVACGEIETAHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLY
                     TMKTAISAADMLNDKVLPFFESQGLPMLRILTDRGSEYCGKV"
BASE COUNT          126 a           78 c          105 g          122 t
ORIGIN      
        1 atttttattt cagcaggtgg tgtgcgttct atttggctac gccataatct cgctaacttt
       61 aaacagcgtt taaatgcgtt agaaaaagca gtggctgaga aaggcattat tctgagtgaa
      121 aaccaagttc aagccttgga gcgtaaaaaa gaagacgatg tggcttgtgg cgaaattgaa
      181 acggctcatc cgggctatct aggttcacaa gataccttct atgtggggaa tcttaagggg
      241 gttggacgca tttatcaaca gacctttatt gatacttata gtaaagtcgc atttgcaaaa
      301 ctgtatacga tgaagacagc aattagtgca gcagatatgc tcaatgataa agtcctaccg
      361 ttctttgagt cccaaggatt accgatgttg cgtattctta ccgaccgagg cagtgagtac
      421 tgtggcaagg t
//
LOCUS       DANMCL010000221          428 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.227, whole genome shotgun sequence.
ACCESSION   DANMCL010000221 DANMCL010000000
VERSION     DANMCL010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 428)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 428)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..428
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.227"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>428
                     /locus_tag="PXF40_002768"
     CDS             <1..>428
                     /locus_tag="PXF40_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011150324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HDL5804033.1"
                     /translation="FVSAGGVRSIWLRHHLANFKQRLIALEKLVAEQGIILSETQVQA
                     LERKKEDEIACGEIETVHPGYLGSQDTFYVGNLKGVGRIYQQTFIDTYSKVAFAKLYT
                     MKTAISAADMLNDKVLPYFESQGLPMLRILTDRGSEYCGKV"
BASE COUNT          133 a           74 c          100 g          121 t
ORIGIN      
        1 tttgtttcag caggaggtgt acgttcgatt tggttacgtc atcatcttgc caattttaag
       61 caaagattaa tcgccctgga aaaactggtt gcagaacaag gtattatact cagtgaaaca
      121 caggtacaag ccttagagcg taagaaagaa gatgagattg cctgtggtga aattgaaacg
      181 gtacaccctg gctatcttgg ctcacaagat actttctatg tgggcaacct caaaggagtg
      241 ggtcgtattt atcaacaaac gtttattgat acttacagta aagtggcgtt tgcaaaactt
      301 tatacaatga agaccgctat cagtgctgcg gatatgctga atgataaagt gttaccatac
      361 tttgaaagcc aaggtttacc gatgttacgc atattaactg accgaggaag tgaatattgt
      421 ggcaaggt
//
LOCUS       DANMCL010000222          383 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.228, whole genome shotgun sequence.
ACCESSION   DANMCL010000222 DANMCL010000000
VERSION     DANMCL010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..383
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.228"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(148..>383)
                     /locus_tag="PXF40_002769"
     CDS             complement(148..>383)
                     /locus_tag="PXF40_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011608580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HDL5804034.1"
                     /translation="LRHSHVAYLIEQGFSPVVIAERLGHESISITLNYAHLYLGRDKT
                     EKKESVIGAIKKHKRKIDKTIEQSHSMSNDMEL"
BASE COUNT          114 a           77 c           42 g          150 t
ORIGIN      
        1 cataatcccc ccttgccaca tttcaatcta ttcagtagac attatagcat attttacctg
       61 ttttttctat atttttggct aaaaacatga tgctaattgc ttcaaaaaaa tggagagtat
      121 caaatttata atactctcca tgtatctcta tagctccata tcgttactca tactatgact
      181 ctgctcaatt gttttatcta ttttcctttt atgtttctta attgctccaa taactgattc
      241 ctttttctct gttttatccc taccaagata taaatgtgca tagtttaagg ttattgagat
      301 actttcatga cctaatcttt ctgcaattac cacaggagaa aatccttgct ctatcaaata
      361 agcaacatga gaatgtctta aat
//
LOCUS       DANMCL010000223          366 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.229, whole genome shotgun sequence.
ACCESSION   DANMCL010000223 DANMCL010000000
VERSION     DANMCL010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.229"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>366
                     /locus_tag="PXF40_002770"
     CDS             <1..>366
                     /locus_tag="PXF40_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804035.1"
                     /translation="NTTNVDLKITIGTRQYSHSFNGKYSSQYLESVVFDNLPPVPFNI
                     SVERLTEDSNSQRLQNGTIWSSYTEIIDTEFTYPNSAVAGISFDSEYFNNIPTRNYLI
                     KAKKVKVPSNYDPVKRTYTG"
BASE COUNT          117 a           84 c           67 g           98 t
ORIGIN      
        1 aataccacca atgttgattt aaaaatcacg attggcacac ggcaatattc gcatagcttt
       61 aacggcaaat acagctcgca ataccttgaa tctgtggtgt ttgataacct gccgcctgtg
      121 ccatttaata tctcagttga gcgtctaacc gaggatagca attcgcaacg cttacaaaac
      181 ggtacaattt ggagtagtta caccgaaatt atcgataccg agtttaccta ccctaattca
      241 gcggttgccg gtatcagttt tgattcggag tattttaata atatcccgac ccgaaactac
      301 ctaattaaag cgaaaaaagt caaagtgcca agcaattatg atccagttaa acgcacttac
      361 accggc
//
LOCUS       DANMCL010000224          354 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.230, whole genome shotgun sequence.
ACCESSION   DANMCL010000224 DANMCL010000000
VERSION     DANMCL010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 354)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 354)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..354
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.230"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            31..107
                     /locus_tag="PXF40_002771"
     tRNA            31..107
                     /locus_tag="PXF40_002771"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:65..67,aa:Ile,seq:gat)
     gene            164..239
                     /locus_tag="PXF40_002772"
     tRNA            164..239
                     /locus_tag="PXF40_002772"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:197..199,aa:Ala,seq:tgc)
BASE COUNT          107 a           75 c           90 g           82 t
ORIGIN      
        1 aagaagacaa aaaaccgaag gtcatccgtt gggtctgtag ctcaggtggt tagagcgcac
       61 ccctgataag ggtgaggtcg gtggttcaag tccactcaga cccaccactc agaaggcaag
      121 cgaaagcgaa gcgactatga gtgaagaaaa cggaagatga aatggggata tagctcagct
      181 gggagagcgc ctgccttgca cgcaggaggt cagcggttcg atcccgctta tctccaccaa
      241 tcatcgtgac tttatcatca tacctaagat tacaagcggt taaaaatacc ggattatttg
      301 caattttagg tatgatgata ggcgaaagcc attatctttg ttctttaaca atat
//
LOCUS       DANMCL010000225          338 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.denovo.231, whole genome shotgun sequence.
ACCESSION   DANMCL010000225 DANMCL010000000
VERSION     DANMCL010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.denovo.231"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..>338
                     /locus_tag="PXF40_002773"
     CDS             <1..>338
                     /locus_tag="PXF40_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006253310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HDL5804036.1"
                     /translation="AVDSLSIGARNLLIDSTYNQHINYNTKMSSITRTVYRGNMLIRL
                     GMLGGAGVAGIVQAPAAQVSNIRQGQEYTLSLNVQGTAGIQKTGLNYVFLMRADGANQ
                     RLATIPVIAS"
BASE COUNT          104 a           79 c           76 g           79 t
ORIGIN      
        1 ctgccgttga ttcactttct atcggtgcaa ggaacttact gatagacagt acttacaacc
       61 aacacatcaa ctacaataca aaaatgtcat caatcacacg cacagtctat cgcggcaata
      121 tgttgatacg actcggaatg cttggtggcg caggtgtggc cggtattgta caagcaccag
      181 ccgctcaagt aagtaatatc agacagggtc aagagtacac acttagcctg aatgtacagg
      241 gtacagccgg catacaaaaa acggggctca actatgtatt cttgatgcgt gctgatgggg
      301 ctaatcaacg gttagcaaca atacctgtta tagccagc
//
LOCUS       DANMCL010000226        11702 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.088, whole genome shotgun sequence.
ACCESSION   DANMCL010000226 DANMCL010000000
VERSION     DANMCL010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 11702)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11702)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11702
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.088"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            <1..650
                     /locus_tag="PXF40_002774"
     CDS             <1..650
                     /locus_tag="PXF40_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="colicin transporter"
                     /protein_id="HDL5804037.1"
                     /translation="KAAKEKAEAERLAAEKEVDPIAIIKAKGIDDTNYGLKLGNSKET
                     IEGKVTVRTQSYLYNQPYSVVTAQAVQRNGWENGNYIDKVDGTVTVKGLKTEKLPTEG
                     TATYSGKAFNHDGAKGFNGGDLTYNVNFSKRTGSGRVEGEFGNLIVLEEGTINNTQIS
                     STVHGNNPLNLSGKYTVEFFGKNAEEIAGEIQTKANLTGEVSNFGLAGTRGDIQK"
     gene            846..2255
                     /locus_tag="PXF40_002775"
     CDS             846..2255
                     /locus_tag="PXF40_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HDL5804038.1"
                     /translation="MKKYPLLFSLFSPVVWAEKVIEHNTDPISFERQPQAVKFEQNVV
                     KNSQKPTAYQPAYSVNQNVEQQINQAILSQDWATLEPLLSRYPQTENFDPLLWHYAQA
                     ALAYAKKDHQTAVFHYRQLLAKPPSLVYPRFDLALILAEDQQFRAAEQEFKAIQAHLP
                     PELAKIARNTQVQIAENEAWQPDFYLQYTQTDNVNNASSSPIVNVNGRIFRKNADSLP
                     QSAKGVRYGLGLSKLHNVKGNHFVGLTLNYSGIYYWDNRDYREQSVSVSPNYSYRTVA
                     YRLTFSPFIEQNWLGSSRYNVQFGATLNGLRYLNSQWLVSGSFTHLQKRYFEELTASR
                     YNSYQHQLSGGVQWQAVKNGRFFANLDGVREIAREKAQSSNKWLARVGAVFQGERWAT
                     QASIGFGKRYFADKHYLFGYKRLDTEYQANLAVWNRTWHWQGIVPKLNFRYQKIDSNI
                     ADFYSRQNKEVFFTLEKLF"
     gene            2401..2874
                     /gene="gpt"
                     /locus_tag="PXF40_002776"
     CDS             2401..2874
                     /gene="gpt"
                     /locus_tag="PXF40_002776"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HDL5804039.1"
                     /translation="MSEKYTNEKYVVTWDMFHMHARKLAENLLPATQWKGIIAVSRGG
                     LFPAAVLARELGIRHVETVCIASYDHDSQGELNVLHAADTDGEGFIVVDDLVDTGNTA
                     KEIRRMYPKARFVTVFAKPHGAPLVDDYVIDIPQETWIEQPWDLGITFVQPLARR"
     gene            2987..3610
                     /gene="gmk"
                     /locus_tag="PXF40_002777"
     CDS             2987..3610
                     /gene="gmk"
                     /locus_tag="PXF40_002777"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HDL5804040.1"
                     /translation="MSLGNLYIISAPSGAGKSSLINALLADLPRSEVQLSISHTTRQP
                     RPAEQDGVHYYFTSHDEFKQLIEQGYFLEWAEVFGNYYGTSLPMIERSLEQGIDVFLD
                     IDWQGARQIREKVPNVKTVFILPPSKTELEKRLIGRGQDSAETIAKRMAEAVSEMNHY
                     NEFDYVIINDDFQQALAELKAILIAERLSLGSQQIRHQHLITDLLNN"
     gene            3700..5097
                     /locus_tag="PXF40_002778"
     CDS             3700..5097
                     /locus_tag="PXF40_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005596137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HDL5804041.1"
                     /translation="MKLSKLAFSVALALTVTACTTGNMSNDGTLQQAQQTYQSYDEIT
                     KQYQINEQWWQGYTDAELNRVVDLAIKNNLDLAKSGIAVNKALYNANLVGANLVPTFS
                     GSGSVSAAKGLGSASSNNVSTGVSTTAAQAAFNLSYTVDLWRRLADTASAAEWTHKAT
                     IEDLKATRLSIINAVVTTYYQLAYYRDAIRITEESIRHYEQISRILTNKMNAGAIDSL
                     AVDQAQQAVLNARNSVIDLKTNQKIAEQTLRNLLNVQPNTPLNIRYPNIMSVKLQGVD
                     LNVPVSAIANRPDVVGSLQRLQSAFKTLTATEKSWFPTLTIGGSITGSATNIGNVADN
                     PVGNGLIKLDLPFLDWNRVKNNVKISETDYVTARLNYEQKITSALNEIDRYYYSYTQS
                     RSSLKILQDTNAKNKRISSYYKNRYEQGVSEFREWITALNTELNSQLAILNAKYAILT
                     NENAVYQAMAGKYRR"
     gene            complement(5210..6055)
                     /locus_tag="PXF40_002779"
     CDS             complement(5210..6055)
                     /locus_tag="PXF40_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HDL5804042.1"
                     /translation="MTFVKKTALSLIATALFATSSFAAEQSQYQHIRNATAKIEYAGK
                     TFLVDPYLAEKDRYLPPNAKKRNPTLDMTVSIDEVLNGVDAVIVTHTHHAHWDDVAQQ
                     RVPKNLPIFVQNAGDARLIRSQGFTDVRVVGKDTPFEGVTLTRTRGQHGTDAMYANPK
                     IAEMVGDAMDVVMKAEGKPTVYLVGDTIWNHEIEHSFNTYKPDFVVLNAGCAKLPNFE
                     GSPIMCTEDVSKAHKIAPQAKILTVHMDALPQTSISSDQMRDYVQKEGLNRVTVPKNG
                     DVIKF"
     gene            complement(6196..9291)
                     /gene="ttrA"
                     /locus_tag="PXF40_002780"
     CDS             complement(6196..9291)
                     /gene="ttrA"
                     /locus_tag="PXF40_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrA"
                     /protein_id="HDL5804043.1"
                     /translation="MNNKRRNLLKGGLALGGAAAFGAGYSPKVSEIAKGVMHGTSGEK
                     TRDAIHGNSLTPEYQVKDGKLLSNPEQIVCNTQCMGCWTQCGIRARVDLNTNQVIRIS
                     GNPYHPLSSDKTLPFGMPIAKAELLLAGESGIENRSTACARGAAFLEGVNSPYRITQP
                     LKRVGKRGEGKWQTISFEQLVEEIINGGNLFGEGEVEGLKTIRNLVDPINPKQPDLGM
                     KANQLLVTFAGPEGRQPILQRFAQKSFGTINFSNHGAYCGAAYRAGSGAFMKDFDNQQ
                     HAKPDWDHAEFILFIGTSPAQSGNPFKRQARQLAKRRPDDNFSYVVVSPRLEMTSSLA
                     TQNNHWVPIKPEGDLALVMGMLRWIIENERFNADYLSRPSLAAMENAGHVSYANASHL
                     IICEPNHPKFGQALRISDLQDVQLDPEEKVEENLIVVKDQASGELISAKDCLQAVIFV
                     EQIAKLLDGSEVLVKSSMQLLKEATQEKTLAEYSDICGVPVQTIENLAKKFTSHGHKA
                     NAITHGGTMHSTGFYTSWAILLLNAMVGNLNKKGGMAVAAGKFKDFGDGPRYNLANFP
                     NEVKPKGTNLARSKKAYQNSSEFKQKVTKGENPYPAQGAWYPFTGGQTTEMFTSMVQG
                     YPYFAKAWINHMANPVYGLTAMNPIALEKLKDPKILPLFVSIDAFMNETTALTDYIVP
                     DTHNFESWGFSTAWGGVPQRTSTARHPIVPSKNAKTAEGDTICMENFVIAVAKKMGLP
                     GFGENAIADLEGNRYPLHRTEDYFLRAAANIAFAGEKPAPDASEQDLLLTGVQRIMPK
                     IEQTLKAEERLKVANVYCKGGRFAPHESAWKEENMEFQWKNCLQIWNENVYKAQHHSN
                     GEHYWGCPRYMSPRFADGSTLEQHYPQSEWGFKLISFKSNIMSSITAPLLRLLSIKPE
                     GLVAMNRLDAEEKGIKHGDVVKLSTPTAGLTVQIVVLDGIARGTIGIEHGYGHKQIGA
                     SSYTIDGVEIPANPMIAKGINLNDLGIIDHTKAVKSPWVDWVCGSAVRNGIPAKVEKL
                     A"
     gene            complement(9281..10312)
                     /gene="nrfD"
                     /locus_tag="PXF40_002781"
     CDS             complement(9281..10312)
                     /gene="nrfD"
                     /locus_tag="PXF40_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006251008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysulfide reductase NrfD"
                     /protein_id="HDL5804044.1"
                     /translation="MIREVLVEPQHIVWLPWIVHYFFFVGVAATAVFTAVLFAKKSLK
                     PTACELAAVTVALIGSIVAPVALTADLHQPSRILHFYTDFAWRSPMAWGAIILPLFSV
                     AVAGYFVLALAHHTRPNLPKWLAWLQLPILQNQGLLWAFRLFATLTAIGIIGYTVLET
                     YQTGTRTLWHSAWLLPIMLFSAWAVALGLTQAVCKMLFHTQTNTGLWTKLCLILTALS
                     LVGLAFSSPQATQDFAQLFNGSITAYLVGIFWLIALICNFSAKNHRLQWLGVLALIAF
                     GWLLRWVLVIQVQTIAKTNALQNPYHFDWTAVDGGLGIVSIFGLTVLVSIVVWQLILI
                     ICGGRKGEQ"
     gene            complement(10314..11042)
                     /gene="ttrB"
                     /locus_tag="PXF40_002782"
     CDS             complement(10314..11042)
                     /gene="ttrB"
                     /locus_tag="PXF40_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetrathionate reductase subunit TtrB"
                     /protein_id="HDL5804045.1"
                     /translation="MDLSKRSFLKELSALTVGASFVPLQSAQAFMPAWREGDENKRYA
                     MLIDLRKCIGCQACTVSCSVENATPLHSFRTTVRQYEITNGTQVVNNVVLPRLCNHCD
                     QPPCVPVCPVQATFQRKDGVMVINNEQCIGCGYCVQACPYDARFINEETKTADKCTFC
                     THRLEVGLLPACVESCVGGARVIGDLNDPKSQISQLYQAHKDDLKVLKPEAGTVPHVF
                     YVGLDDDAFVSKIDGQPMLWTGEA"
BASE COUNT         3146 a         2658 c         2693 g         3205 t
ORIGIN      
        1 aaaaagcggc gaaagagaaa gcggaagcgg agcgtttagc agcagaaaaa gaagtagatc
       61 ctatagctat tattaaagca aaaggtattg atgatacaaa ttacggctta aaacttggta
      121 atagtaaaga aactattgag ggtaaagtca cagtcagaac acagagttat ttatataatc
      181 agccatattc tgtagtaaca gcacaagcag ttcaaagaaa tggctgggaa aacggtaatt
      241 atattgataa agttgatgga acagttacag ttaaaggatt gaaaacagag aaattaccaa
      301 cagagggtac tgcaacatat tcaggaaaag catttaacca cgatggagct aaaggtttta
      361 atggtggtga tctaacctat aatgttaatt tctctaagcg taccggttca ggtagagttg
      421 agggagaatt tggaaactta atcgtattag aagaggggac gattaataat actcagattt
      481 cttcaacagt acatggcaat aatcctttaa acctttctgg aaaatataca gtcgaatttt
      541 tcggtaaaaa tgcagaggaa attgccggtg aaattcagac aaaagcaaat cttactgggg
      601 aagtgagtaa ttttggactt gccggcactc gtggcgatat ccaaaaataa ccttttctaa
      661 cgttcaatgc cgtttaacga aaaattaaac ggcatttgtc ttgatattgc ttgtagatac
      721 cataagacac aatagtttag atttcaattt acagcttcta ataaccctct cccacaaggg
      781 gagagagtga taaatcccgt agaggcgaac atataggtcc gcccctacca attttcttta
      841 tctttatgaa aaaatatccc cttttatttt cgctgttcag ccccgttgta tgggcagaaa
      901 aggtgattga acacaacact gacccgattt cctttgagcg tcagccgcaa gcggttaaat
      961 ttgagcaaaa tgttgtaaaa aattcacaaa aaccgaccgc ttatcagcct gcgtattcag
     1021 tcaatcagaa tgttgaacag caaattaacc aagcgattct cagccaagat tgggcaacgc
     1081 ttgaaccgct tttaagccgt tatccgcaaa ctgaaaattt tgacccgttg ttgtggcact
     1141 atgcgcaagc cgcacttgcc tatgcgaaaa aagatcatca aaccgcagtt tttcactatc
     1201 gccaactgtt agctaagccc ccgagtttgg tttaccctcg ttttgatttg gcgttgattt
     1261 tggcagaaga tcagcaattt cgtgcggcag agcaggaatt taaggctatt caagcccatt
     1321 taccgccgga acttgctaaa attgcccgca atactcaagt ccaaattgct gaaaatgagg
     1381 cgtggcagcc cgatttttat ctgcaatata cccaaacaga taacgtgaat aatgcctcat
     1441 cttcgccgat tgtgaatgta aatgggcgga ttttccgcaa aaatgcagac agtttgccac
     1501 aatcagcaaa aggcgtgcgt tatggcttag ggttgagtaa attgcacaac gtgaaaggca
     1561 atcattttgt cggtttaacg ctcaattata gcgggattta ctattgggat aaccgagatt
     1621 accgtgagca atccgtatcc gtttcgccga attatagcta ccgcaccgtc gcttatcggc
     1681 tgactttttc gccttttatt gagcaaaatt ggctggggag tagccgttat aatgttcaat
     1741 ttggggcaac actcaacggt ttgcgttacc ttaattcgca atggttggtg tcggggagtt
     1801 ttacccattt gcaaaaacgg tattttgagg agctaaccgc aagccgttat aacagctatc
     1861 agcaccaact cagtggcggt gtgcagtggc aagcggtcaa aaatgggcgg ttttttgcaa
     1921 atttagacgg cgtgcgtgaa attgcacggg aaaaagcaca aagctcgaat aagtggctgg
     1981 ctcgagtggg ggcggttttt caaggcgaac gctgggcaac gcaggcaagt atcggctttg
     2041 gcaagcgata ttttgccgac aagcactatt tgtttggcta taagcggtta gacacggaat
     2101 atcaagccaa tttagcggtt tggaaccgca cttggcattg gcagggcatt gtgccgaagc
     2161 tgaatttccg ttatcaaaaa attgacagca atattgctga tttttactct cgccaaaaca
     2221 aggaagtctt tttcacttta gaaaagctat tttagtgttg gttttttgtg ctaagcatac
     2281 gattgcgtag ctgccggcac aaaaaaataa atgaaatgat ggcgaaaaaa gcattttcgg
     2341 gttatcctag tgcaattttt tatatcgggg tagcccccaa ttttatatta ggttgtttct
     2401 atgagtgaaa aatacacaaa tgaaaaatat gtcgtgacgt gggatatgtt ccatatgcac
     2461 gctcgcaagt tggcagaaaa tttattacct gccacacagt ggaaagggat tattgcggtg
     2521 agccgtggcg gcttgtttcc ggcagccgtt ttagcacgtg agttgggtat tcgccacgta
     2581 gaaacagtgt gcattgccag ctacgatcac gatagccaag gtgagttaaa tgtgttacac
     2641 gcagccgata ccgatggcga aggctttatt gtggtagatg atttagtgga taccggcaac
     2701 acggcaaaag aaattcgcag aatgtacccg aaagctcgtt ttgtaaccgt gtttgcgaaa
     2761 ccgcacggtg caccgttggt tgatgattat gtgattgata ttccacaaga aacgtggatt
     2821 gagcagcctt gggatttagg cattaccttc gttcagcctt tggcacgtag ataattttgt
     2881 gtaatggaca atgaaagttg tccattattt tttatttatt cctatgaaat gtaggggcga
     2941 atcatcattc gccctattcc caaaatcaaa taggtatata caaataatga gtttaggcaa
     3001 tctttatatt atttctgccc caagtggagc aggaaaatct tccttaatta acgccttgtt
     3061 ggcggattta ccccgttcgg aagtacagct ttcgatttca cacactaccc gtcagcctcg
     3121 tccggcagaa caggacggcg tgcattatta tttcacttcg cacgatgagt ttaagcagct
     3181 gattgagcaa gggtattttt tagaatgggc ggaggtgttt ggcaattatt acggcacatc
     3241 attgccgatg attgaacgta gcctagagca gggcattgat gtctttttgg atattgactg
     3301 gcaaggggct agacaaattc gggaaaaagt gccgaatgtg aaaaccgttt ttattttgcc
     3361 accgtcaaaa acagaattgg aaaaacgttt aatcgggcgt gggcaagatt ccgctgaaac
     3421 cattgccaaa cgtatggcag aggcggtgtc ggaaatgaac cattacaatg agttcgatta
     3481 tgtgattatt aatgatgatt tccaacaggc attggcagag ctaaaagcga ttttaattgc
     3541 cgagcgtttg agcttaggtt cgcaacaaat tcgtcatcag catttgatta ctgatttgtt
     3601 aaataattaa atgaacagtt gttcatttaa ctggaaaggc aatctgtttt tgggtagaat
     3661 acgcccattt tcccctcttt attttcaaaa ggaaatgtaa tgaaactttc aaaattagca
     3721 ttttctgtgg cgttggctct aaccgtaacg gcttgtacca cagggaatat gagcaatgac
     3781 gggactttgc aacaagcaca gcaaacctat caaagctatg atgaaattac caaacaatat
     3841 caaattaacg agcaatggtg gcaaggctat acggatgcgg aattaaaccg tgtggttgat
     3901 ttagccatca aaaataacct tgatttagcc aaaagcggaa ttgcagtcaa taaagccttg
     3961 tataacgcta atttagtagg ggcaaattta gtgccaacct ttagtggttc aggttctgtt
     4021 tctgcggcta aaggtttagg ttcggcttct tcaaataatg tttcgaccgg tgtttcaaca
     4081 accgcagctc aagctgcatt taatttaagt tatactgtgg atttatggcg acgtttagcc
     4141 gataccgcca gtgcggcaga atggacgcat aaagccacca ttgaagactt aaaagctacc
     4201 cgtttatcta ttattaatgc ggttgtgact acttactacc agttagctta ctatcgtgat
     4261 gcgattcgta ttaccgaaga gagcattcgc cattatgagc aaatcagccg tattttaact
     4321 aacaaaatga atgccggtgc gattgatagt ttagcggttg atcaggctca acaagcggtc
     4381 ttaaacgcca gaaatagtgt aattgatctg aaaaccaacc aaaaaattgc cgagcaaaca
     4441 ttacgcaatt tgttaaatgt tcagccaaat actccgctta acattcgtta cccgaatatt
     4501 atgagcgtga aattgcaagg ggtagattta aatgtgccag tgtcagccat tgctaatcgc
     4561 cctgatgtag taggctcgtt acaacgctta caaagtgcat ttaaaacctt aaccgcaacc
     4621 gagaaaagct ggttcccaac cttaaccatc ggtggttcta ttaccggtag tgcaaccaat
     4681 atcggcaatg tggcagataa ccctgtgggt aacggcttaa ttaaattgga tttaccgttc
     4741 ttagattgga atcgggttaa aaataacgta aaaatttctg aaacggatta tgtgactgcc
     4801 cgtttaaact atgagcaaaa aattacctca gccttaaatg aaattgaccg ttattattac
     4861 agttatacgc agtcgagaag ctcgttaaaa atccttcaag ataccaatgc gaaaaataaa
     4921 cgtatcagtt catactataa aaaccgttat gaacaagggg tgtcggagtt ccgtgagtgg
     4981 attaccgcac tgaataccga gcttaattct cagttggcga ttttaaatgc aaaatatgcg
     5041 attttgacca acgagaatgc ggtttaccaa gcaatggcag gtaaatacag aagataatta
     5101 tatctaaaac tatatactat ggttggtaaa agtgggttaa ggcttgatgg cttaacccgc
     5161 ttcgctattt attgctactt aaaccatttt ggtaatgtta gtttagctac tagaacttaa
     5221 tcacatcacc gtttttcggc acagttacac gatttaatcc ctctttttgt acataatcac
     5281 gcatctgatc actgctgatt gaggtttgtg gcagggcgtc catatgcaca gttaagattt
     5341 tcgcttgtgg agcgattttg tgtgctttgg aaacatcttc ggtacacata atcgggctgc
     5401 cttcaaagtt tggtagtttg gcacagccgg cattcagcac cacaaagtct ggtttgtaag
     5461 tgttgaacga atgttcgatt tcgtggttcc aaatggtatc tcccaccaaa tagacggtcg
     5521 gtttgccttc cgctttcatc actacgtcca tcgcatcgcc gaccatttcg gcaattttcg
     5581 ggttcgcata catcgcatcg gtgccgtgct ggccacgagt tcgggttaag gttacgcctt
     5641 caaacggggt atctttgccg accacacgca catcggtaaa gccttgtgaa cggattaaac
     5701 gggcatcacc ggcattctgc acaaaaatcg gcagattttt cggcacacgt tgttgtgcta
     5761 catcgtccca gtgagcgtgg tgagtgtgag ttacgatcac cgcatccacg ccatttaaca
     5821 cttcatcaat gctcacagtc atatccaagg tcggattacg ttttttcgca ttcggcggta
     5881 agtagcgatc tttctccgct aaatacggat caaccaaaaa cgtcttgccg gcatattcaa
     5941 ttttcgccgt tgcattacga atatgttggt attggctctg ctcagcggca aaacttgatg
     6001 tagcgaaaag tgccgttgca atcaggctca gtgctgtttt tttgacaaaa gtcataggtt
     6061 ctccaaaata aattaaaatg cagagtatga ttttttacgc tctgcaatgc tggtttgcat
     6121 aaggaacagt gtcccttaca tcaataaaag cggtcgattt tgcacatttt tctgcaaaac
     6181 caaccgcttg ttcggctagg ctaatttctc taccttcgcc ggaatgccat ttctcaccgc
     6241 tgagccacag acccaatcta cccacgggga tttgaccgct ttggtgtggt cgataatgcc
     6301 gaggtcgttg aggttaatcc ctttggcgat catcgggttg gctggaattt ccacgccgtc
     6361 aatggtgtag gaacttgccc caatctgttt atgaccgtag ccgtgttcga tgccgattgt
     6421 gcctcgggcg ataccgtcca acaccacaat ctgcaccgtc aagccggcgg ttggggtgct
     6481 gagtttcacc acatcgccgt gtttaatgcc tttttcttcc gcatctaaac ggttcatcgc
     6541 cactaagccc tcaggcttga tcgagagcag acgcaacagt ggggcggtaa tactgctcat
     6601 aatgttcgat ttaaacgaaa tcagtttaaa gccccattcc gactgcggat agtgctgctc
     6661 cagcgtggag ccgtccgcaa aacgtggcga catataacga gggcagcccc aatagtgttc
     6721 accgttgctg tggtgctggg ctttatacac gttttcgttc caaatttgca ggcagttttt
     6781 ccactggaac tccatattct cctctttcca cgcactttcg tgtggggcaa aacgtccgcc
     6841 tttgcaatac acattcgcca cttttaatcg ctcttcggct tttagcgttt gttcaatttt
     6901 cggcataatc cgttgcacgc cggtgagcag cagatcttgc tcgctggcgt ccggtgcagg
     6961 tttctcaccg gcaaaggcaa tgttcgctgc cgcccgtagg aagtaatctt cggtacggtg
     7021 gagcggatag cggttgcctt ctaaatcggc aatcgcattt tcgccaaagc ccggcaagcc
     7081 catttttttc gccaccgcaa tcacgaaatt ctccatacag atggtgtcgc cttcggcagt
     7141 tttggcgttt ttggacggca caatcgggtg gcgtgcggtg ctggtgcgtt gaggcacacc
     7201 gccccacgcc gttgaaaagc cccagctctc aaagttgtgg gtgtccggca cgatgtagtc
     7261 cgtcagtgca gtggtttcgt tcataaaagc atcaatagag acaaagagcg gtagaatttt
     7321 cggatctttt aatttctcca acgcaatcgg gttcatagcg gttaagccgt aaacggggtt
     7381 cgccatatgg ttgatccacg ctttcgcaaa gtatggatag ccctgcacca ttgaggtaaa
     7441 catctcggta gtttgcccgc cggtgaacgg ataccacgcc ccttgtgccg gatacggatt
     7501 ttcgcccttc gtcactttct gcttaaattc gcttgaattt tggtacgcct ttttactgcg
     7561 ggcaaggttc gtgccttttg gcttcacttc attcgggaag ttcgctaaat tgtagcgagg
     7621 cccgtccccg aaatctttga atttgcctgc ggctactgcc attccgcctt ttttgttgag
     7681 gttaccgacc attgcattca gcaacaaaat cgcccaactg gtataaaaac cggtgctgtg
     7741 catcgtgccg ccgtgagtga tggcattggc tttatgaccg tgcgaagtga attttttcgc
     7801 taagttttca atggtttgca ccggcacgcc acaaatgtcg ctatattcgg caagggtttt
     7861 ctcttgtgtc gcctctttca gcaactgcat tgaggatttc accaacactt ccgagccatc
     7921 aagcagtttt gcaatttgtt cgacaaaaat gaccgcttgt aagcaatctt ttgctgaaat
     7981 gagttcgccg cttgcctgat cttttaccac aatcaggttt tcttccactt tctcttcggg
     8041 gtcgagttgc acatcttgca gatcgctaat ccgcaacgcc tgcccgaatt tcgggtggtt
     8101 cggttcgcaa ataatcagat gtgacgcatt ggcatagctg acgtggccgg cattttccat
     8161 cgctgccaga cttgggcggg agaggtagtc agcattgaaa cgctcgtttt cgataatcca
     8221 acgcaacatt cccattacca acgccaaatc gccctcgggc ttaatcggca cccaatggtt
     8281 gttttgggtg gcgagggagg aggtcatctc caaacgaggg gaaaccacca catagctgaa
     8341 attgtcatca gggcggcgtt tggcaagctg gcgagcctga cgcttaaacg gattgcccga
     8401 ctgtgccgga gacgtgccga taaacagaat aaattcagcg tgatcccagt ccggcttggc
     8461 gtgttgttgg ttgtcaaaat ctttcataaa ggcacccgaa ccggcacggt acgcagcgcc
     8521 acaataagcc ccgtggttgg aaaagttgat cgtgccgaag ctcttttggg caaagcgttg
     8581 caaaatcggc tgacgacctt cggggccggc aaaagtaact aaaagctggt ttgctttcat
     8641 tcccaaatca ggctgtttcg ggttaatcgg atcgaccaga ttgcggatcg tcttcaagcc
     8701 ctccacttcg ccttcaccaa ataggttgcc accattgatg atttcctcca ccaactgctc
     8761 aaagctgatg gtctgccact tgccttcgcc ccgttttccg acccgtttca acggttgggt
     8821 aatccgatac gggctgttca ccccctccaa gaacgccgcc cctctagcac aggcggtgga
     8881 gcgattttca atgccacttt cgcccgccag caacagttcc gccttggcaa tcggcatacc
     8941 gaacggcagg gttttgtcgg aggaaagcgg gtgatacgga ttgcccgaaa tgcgaatcac
     9001 ttggttggtg ttcaaatcca ccctcgcccg aatgccacac tgcgtccaac agcccataca
     9061 ctgtgtattg cacacaattt gctcaggatt gctgagcagt ttgccgtctt ttacctgata
     9121 ctccggcgtg agcgaattac cgtgaattgc atcacgggtt ttctcgcccg atgtgccgtg
     9181 catcacccct ttggcaatct ccgacacctt cggcgaatac ccggccccaa acgccgccgc
     9241 cccaccaagt gccagcccgc ctttcaacag atttctgcgt ttattgttca ccttttcttc
     9301 ccccacaaat tattaaaatc agttgccata ccacgatact tactagcacc gttagcccaa
     9361 aaatcgagac aatccccaaa ccaccatcga cggctgtcca atcgaaatga tatggatttt
     9421 gcaaggcatt ggttttggca atggtttgga cttggatcac cagtacccag cggagtagcc
     9481 agccgaaagc gatgagggca agcacgccga gccattgcaa gcggtggttt ttggcagaaa
     9541 aattgcaaat gagggcaatt agccagaaaa tgccgacaag gtaagcggtg attgagccat
     9601 tgaagagctg ggcaaaatct tgtgtggctt gtggactact gaatgctagt ccgacaagcg
     9661 aaagtgcggt taaaatcagg cagagttttg tccatagccc cgtgttggtt tgggtgtgga
     9721 acagcatttt gcagaccgct tgggtaagcc ccaatgccac cgcccacgca gaaaagagca
     9781 taatcggcag cagccacgca ctgtgccata aggttcttgt gccggtttgg taggtttcaa
     9841 gcacggtgta gccgataatg ccgatagcgg tgagtgtggc aaacaggcgg aatgcccaaa
     9901 gcaagccttg attttgcagt atcggcaact gtagccacgc taaccatttc ggcaggttcg
     9961 gccgggtatg gtgagccaat gccagcacaa aataacccgc taccgccacg ctgaacaggg
    10021 gcaggataat cgctccccac gccattggag atcgccacgc aaaatcggtg tagaaatgca
    10081 gaatacggct cggttggtgc aggtcggcag tcaatgccac aggggcgaca atcgagccaa
    10141 tcaaggctac cgtcaccgcc gccagctcgc aagcggtcgg tttcagtgat ttttttgcaa
    10201 acagcacggc ggtaaacact gccgttgccg ccacgcctac gaagaagaaa taatgcacaa
    10261 tccacggcaa ccagacgata tgttgcggtt ccactaatac ttcacgaatc attttacgcc
    10321 tcccccgtcc agagcattgg ttgcccgtca attttgctca caaaggcatc atcgtctagc
    10381 cccacataga aaacgtgtgg cacggtgccg gcctccggtt tcaggacttt caaatcatct
    10441 ttgtgggctt gataaagttg ggaaatttga cttttcgggt cgttcaaatc gccaatcacc
    10501 cttgccccgc ccacgcaact ttccacgcac gccggcagca gacctacctc caaacggtga
    10561 gtgcagaagg tgcatttatc ggcggttttg gtctcttcat tgataaaacg ggcatcatac
    10621 gggcaggctt gcacgcagta accacagccg atgcactgct cattgttaat caccatcaca
    10681 ccgtctttac gttgaaaggt tgcctgcacc gggcagaccg gcacacacgg cggttgatcg
    10741 caatggttac acaaacgagg caacaccaca ttgttcacca cctgcgtgcc gttggtgatt
    10801 tcatattgac gcaccgtggt gcggaaactg tgcaacggcg tggcgttctc caccgaacag
    10861 ctcacggtac acgcttgaca gccgatacat ttacgcaaat caatcagcat cgcatagcgt
    10921 ttgttctcat cgccctcacg ccaagccggc ataaacgcct gggccgattg caacggcaca
    10981 aaactcgccc ccaccgtcaa ggcggaaagc tctttcaaaa aggaacgttt gcttaaatcc
    11041 atatttcccc cacaaattta aaaataacaa aggtattcta aggcggagag ggaacggcaa
    11101 ggtattgtgg ttttccacat atcaagggga aagttgattt gggtcaagga tgaagggaaa
    11161 tgccctatac aagtagataa tagggcattg atactaatta aaaagcaata agatggttta
    11221 gtttagatct aaagttttta tacgcattaa tatcactcgg ggtactaggt atcgctaatc
    11281 tcctagaatt tggggcaatt aatatattat gtttctttcc ttttctaatt ttccatcctg
    11341 cttttaattt agatataaca atactattta taagagaatc attactgtat ttcttcatat
    11401 atccccctac aaatcgtagc ataatctaaa tcctattttg gtatatttat attttcctga
    11461 ccaatccaat ggtggaacgg cccttataac agacttgtcg ccataaaagc tggttaatgt
    11521 tttagagcga acacaagcct tttcaagaat ccattccgca aatctgtcag attctatgaa
    11581 gtttatgtgg ttgtgcatca ttatttttat atcttttgaa aacctcatta ttattttttg
    11641 aaatttttct tcctccatat aaggaggtgg ttctgtagat attttctcat catatataaa
    11701 tt
//
LOCUS       DANMCL010000227         7794 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.106, whole genome shotgun sequence.
ACCESSION   DANMCL010000227 DANMCL010000000
VERSION     DANMCL010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 7794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7794
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.106"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(316..1608)
                     /locus_tag="PXF40_002783"
     CDS             complement(316..1608)
                     /locus_tag="PXF40_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HDL5804046.1"
                     /translation="MGTYIPHREGIIQTIVRNSLTQYQAYASPSQTILDRLEHFAECA
                     DWTKGVVRIRCHDCGHSYFRPFSCKVFHLCPSCDQKRTLLYAEYLAEDLLLDLPHRQF
                     VFTIPKILRPYFKSDKRLFGEVSRLVFSLLSDFFSLAAGQELLCACVVSYQSFGEFAR
                     FHPHWHVLVLEGGFTKYDRFVYLPIGADEGMLKVWQAAIMALFLRKELIDQARVNMLR
                     DWKHSGFSIESETRLFNKADREALGQYVVRGATCAEKIQYDPASDTIIWTASPKGFYK
                     GKTETFKGFEFVDQLVAHLPPRRVQLLRRYGVYAGKVRKQWQERPNIYSLAPESWQKG
                     HPRESKIVPAIPQEKPETVQVSDAWSKLRKQSWARLLQKVYEVDPFVCPKCQGTMSVV
                     AIIEDPKELAKIINWAKQQEREQPVAVCARSPPELALV"
     gene            1771..2616
                     /gene="sul2"
                     /locus_tag="PXF40_002784"
     CDS             1771..2616
                     /gene="sul2"
                     /locus_tag="PXF40_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HDL5804047.1"
                     /translation="MEYTSKSQIARNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQA
                     RKLMAEGADVIDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQ
                     AYALSRGVAYLNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHI
                     AAFFDARIAALTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLL
                     SVSRKSFLRALTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKE
                     TARIR"
     gene            2785..3588
                     /locus_tag="PXF40_002785"
                     /note="aph(3'')-Ib"
     CDS             2785..3588
                     /locus_tag="PXF40_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HDL5804048.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            3588..4424
                     /locus_tag="PXF40_002786"
     CDS             3588..4424
                     /locus_tag="PXF40_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HDL5804049.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            4760..5575
                     /locus_tag="PXF40_002787"
     CDS             4760..5575
                     /locus_tag="PXF40_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_032492145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3')-Ia"
                     /protein_id="HDL5804050.1"
                     /translation="MSHIQRETSCSRPRLNSNLDADLYGYKWARDNVGQSGATIYRLY
                     GKPDAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTALP
                     GKTAFQVLEEYPDSGENIVDALAAFLRRLHSIPVSNCPFNSDRVFRLAQAQSRMNNGL
                     VDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG
                     RVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF"
     gene            complement(5729..6322)
                     /locus_tag="PXF40_002788"
                     /pseudo
     CDS             complement(5729..6322)
                     /locus_tag="PXF40_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001201005.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA--6-aminopenicillanic acid
                     acyl-transferase"
     gene            complement(6323..6472)
                     /locus_tag="PXF40_002789"
                     /pseudo
     CDS             complement(6323..6472)
                     /locus_tag="PXF40_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000238497.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
     gene            6492..6998
                     /locus_tag="PXF40_002790"
     CDS             6492..6998
                     /locus_tag="PXF40_002790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804051.1"
                     /translation="MAYQTLKSTQSQTQEKSDERAKQLLGSRVVEQVSESERENGNGR
                     EISSGSRQTSNEQRTGYSGNSSQEYRQISKSGERLTNKTSENALIEPTRPIKNKNGSK
                     VAPTPTNTPKTQNNANSNLLSSEQYRQTMEFLREFNDRLEQIAQNILENQLKALRTKA
                     KPSHCQWY"
     gene            6976..7548
                     /locus_tag="PXF40_002791"
                     /pseudo
     CDS             6976..7548
                     /locus_tag="PXF40_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015484607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03752 family integrating conjugative element
                     protein"
     gene            7561..>7794
                     /locus_tag="PXF40_002792"
     CDS             7561..>7794
                     /locus_tag="PXF40_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03751 family conjugal transfer lipoprotein"
                     /protein_id="HDL5804052.1"
                     /translation="MKALYCIMMSALLITGCTTSTEELLPANGSTMRDIWDKGAGNND
                     LHLYRSQQGRTLDPVDYIPNTEQRAYTRTAENEI"
BASE COUNT         1934 a         1953 c         2001 g         1906 t
ORIGIN      
        1 cgctaaggct acaggtgcac gcccccaaat aaataaatta taggaactgt catttcgggt
       61 tttttgcggt ttcgggtcaa aattcggttt tttccccgaa ctacgactgt tttcgcaccc
      121 cgaacaacta atccaatcag aattttccgg caacgccgac tccaagaagt gtaattccag
      181 tctatttctg ccgtcaaccc ctgattcgcg ttaatgcgac aaagctcaaa cacataactc
      241 ccccacgaag ccatataaac tccgatttcg aggtgttatc ctgttccgca taaacttcgt
      301 ttttgggtat tatacctaca ccaaagcaag ctcaggaggt gaacgagcac agacggccac
      361 tggctgctcc cgttcctgct gctttgccca gttaataatc ttggcaagct ccttgggatc
      421 ctcgattatc gccacaaccg acattgttcc ctggcatttt gggcaaacaa acgggtcaac
      481 ttcatagact ttctgtaaca accgtgccca actttgtttg cgcaacttgg accaggcatc
      541 ggaaacttgg acagtttccg gtttctcctg aggtatggct ggaacaattt tggattcgcg
      601 tggatgacct ttttgccaac tttctggggc caggctataa atattggggc gctcttgcca
      661 ctgcttgcgg actttgcccg catatacgcc atagcgacga agcaattgaa cccgccttgg
      721 tggtaaatgg gccacaagct ggtcgacgaa ttcaaagcct ttgaaggtct ctgtttttcc
      781 tttgtagaat ccctttgggc tagctgtcca gattatcgtg tcggaagctg gatcatactg
      841 aattttttct gcacaggtag cgccgcgaac gacatactgg ccgagggctt ctcgatcggc
      901 cttgttgaat agtctggttt cgctctcgat gctaaagccg gaatgcttcc agtctctgag
      961 catgttcact cgggcttgat ctattagttc ctttcgcaga aacaaagcca taatcgctgc
     1021 ttgccagacc ttgagcatcc cttcgtcggc tccaattggt aaatatacaa agcggtcgta
     1081 cttggtgaac ccaccttcca gaaccagaac atgccagtgc gggtggaatc gagcgaattc
     1141 accaaacgac tgatagctga caacacaggc acatagtagt tcttgaccgg ctgccaggga
     1201 gaaaaaatca gaaagcaagg agaataccag cctggacacc tcgccaaaca gtcgcttatc
     1261 cgatttaaag tatggtctga gaatcttggg aatcgtaaaa acaaattgcc gatgcggtag
     1321 atcaaggagc aaatcctcgg ccaggtattc agcatagagt aaggtccgtt tttggtcaca
     1381 ggatgggcaa aggtggaaaa ccttgcacga aaatggcctg aagtacgaat gtccacaatc
     1441 atggcaacgt attcgaacaa cacccttggt ccaatcggca cattcagcaa aatgctcaag
     1501 gcggtcaagg atagtttgcg atggacttgc gtaggcttgg tactgggtta gagaattgcg
     1561 gactatggtc tggattatcc cttcccgatg gggaatgtaa gttcccatac ctatacatac
     1621 gcaggaaaac gatcatttgc ttgcaattgc gaagaaaata atggaaaatg tggactggcg
     1681 ccacctaaca accggttcga gcggactcac gggacaagcc cgttcgcagc tcaaccgaaa
     1741 gttaggttga cgccttcggc gcggaggaaa atggaatata caagtaaatc acaaatagct
     1801 cgaaataaat cgctcatcat tttcggcatc gtcaacataa cctcggacag tttctccgat
     1861 ggaggccggt atctggcgcc agacgcagcc attgcgcagg cgcgtaagct gatggccgag
     1921 ggggcagatg tgatcgacct cggtccggca tccagcaatc ccgacgccgc gcctgtttcg
     1981 tccgacacag aaatcgcgcg tatcgcgccg gtgctggacg cgctcaaggc agatggcatt
     2041 cccgtctcgc tcgacagtta tcaacccgcg acgcaagcct atgccttgtc gcgtggtgtg
     2101 gcctatctca atgatatccg cggttttcca gacgctgcgt tctatccgca attggcgaaa
     2161 tcatctgcca aactcgtcgt tatgcattcg gtgcaagacg ggcaggcaga tcggcgcgag
     2221 gcacccgctg gcgacatcat ggatcacatt gcggcgttct ttgacgcgcg catcgcggcg
     2281 ctgacgggtg ccggtatcaa acgcaaccgc cttgtccttg atcccggcat ggggtttttt
     2341 ctgggggctg ctcccgaaac ctcgctctcg gtgctggcgc ggttcgatga attgcggctg
     2401 cgcttcgatt tgccggtgct tctgtctgtt tcgcgcaaat cctttctgcg cgcgctcaca
     2461 ggccgtggtc cgggggatgt cggggccgcg acactcgctg cagagcttgc cgccgccgca
     2521 ggtggagctg acttcatccg cacacacgag ccgcgcccct tgcgcgacgg gctggcggta
     2581 ttggcggcgc tgaaagaaac cgcaagaatt cgttaactgc acattcggga tatttctcta
     2641 tattcgcggt tcagcaggca tgtccccttt gagggcgacc cgacgacagg ataatcgacc
     2701 ttatggtgcg caaatatttc ggcacagatg gtattcgtgg caaagccacc tccgcgcttc
     2761 atcagaaaac tgaaggaacc tccattgaat cgaactaata ttttttttgg tgaatcgcat
     2821 tctgactggt tgcctgtcag aggcggagaa tccggtgatt ttgtttttcg acgtggtgac
     2881 gggcatgcct tcgcgaaaat cgcacctgct tcccgccgcg gtgagctcgc tggagagcgt
     2941 gaccgcctca tttggctcaa aggtcgaggt gtggcttgcc ccgaggtgat caactggcag
     3001 gaggaacagg agggtgcatg cttggtgata acggcaattc cgggagtacc ggcggctgat
     3061 ctgtctggag cggatttgct caaagcgtgg ccgtcaatgg ggcagcaact tggcgctgtt
     3121 cacagcctat cggttgatca atgtccgttt gagcgcaggc tgtcgcgaat gttcggacgc
     3181 gccgttgatg tggtgtcccg caatgccgtc aatcccgact tcttaccgga cgaggacaag
     3241 agtacgccgc agctcgatct tttggctcgt gtcgaacgag agctaccggt gcggctcgac
     3301 caagagcgca ccgatatggt tgtttgccat ggtgatccct gcatgccgaa cttcatggtg
     3361 gaccctaaaa ctcttcaatg cacgggtctg atcgaccttg ggcggctcgg aacagcagat
     3421 cgctatgccg atttggcact catgattgct aacgccgaag agaactgggc agcgccagat
     3481 gaagcagagc gcgccttcgc tgtcctattc aatgtattgg ggatcgaagc ccccgaccgc
     3541 gaacgccttg ccttctatct gcgattggac cctctgactt ggggttgatg ttcatgccgc
     3601 ctgtttttcc tgctcattgg cacgtttcgc aacctgttct cattgcggac accttttcca
     3661 gcctcgtttg gaaagtttca ttgccagacg ggactcctgc aatcgtcaag ggattgaaac
     3721 ctatagaaga cattgctgat gaactgcgcg gggccgacta tctggtatgg cgcaatggga
     3781 ggggagcagt ccggttgctc ggtcgtgaga acaatctgat gttgctcgaa tatgccgggg
     3841 agcgaatgct ctctcacatc gttgccgagc acggcgacta ccaggcgacc gaaattgcag
     3901 cggaactgat ggcgaagctg tatgccgcat ctgaggaacc cctgccttct gcccttctcc
     3961 cgatccggga tcgctttgca gctttgtttc agcgggcgcg cgatgatcaa aacgcaggtt
     4021 gtcaaactga ctacgtccac gcggcgatta tagccgatca aatgatgagc aatgcctcgg
     4081 aactgcgtgg gctacatggc gatctgcatc atgaaaacat catgttctcc agtcgcggct
     4141 ggctggtgat agatcccgtc ggtctggtcg gtgaagtggg ctttggcgcc gccaatatgt
     4201 tctacgatcc ggctgacaga gacgaccttt gtctcgatcc tagacgcatt gcacagatgg
     4261 cggacgcatt ctctcgtgcg ctggacgtcg atccgcgtcg cctgctcgac caggcgtacg
     4321 cttatgggtg cctttccgca gcttggaacg cggatggaga agaggagcaa cgcgatctag
     4381 ctatcgcggc cgcgatcaag caggtgcgac agacgtcata ctagatatca agcgacttat
     4441 cctatcccct gggaacacat caatcttacc ggagaatatc gttggccaaa gccttagcgt
     4501 aggatttcgc cctctcccgc aaacgacccc tttattgtag gtgggccagt tggtgatttt
     4561 gaacttttgc tttgccacgg aacggtctgc gttgtcggga agatgcgtga tctgatcctt
     4621 caactcagca aaagttcgat ttattcaaca aatccacgtt gtgtctcaaa atctcttatg
     4681 ttatattgca caagataaaa atatatcatc atgaacaata aaactgtctg cttacataaa
     4741 cagtaataca aggggtgtta tgagccatat tcaacgggaa acgtcttgct cgaggccgcg
     4801 attaaattcc aacctggatg ctgatttata tgggtataaa tgggctcgcg ataatgtcgg
     4861 gcaatcaggt gcgacaatct atcgattgta tgggaagccc gatgcgccag agttgtttct
     4921 gaaacatggc aaaggtagcg ttgccaatga tgttacagat gagatggtca gactaaactg
     4981 gctgacggca tttatgcctc ttccgaccat caagcatttt atccgtactc ctgatgatgc
     5041 atggttactc accactgcgc tccccgggaa aacagcattc caggtattag aagaatatcc
     5101 tgattcaggt gaaaatattg ttgatgcgct ggcagcgttc ctgcgccggt tgcattcgat
     5161 tcctgttagt aattgtcctt ttaacagcga tcgcgtattt cgtctcgctc aggcgcaatc
     5221 acgaatgaat aacggtttgg ttgatgcgag tgattttgat gacgagcgta atggctggcc
     5281 tgttgaacaa gtctggaaag aaatgcataa gcttttgcca ttctcaccgg attcagtcgt
     5341 cactcatggt gatttctcac ttgataacct tatttttgac gaggggaaat taataggttg
     5401 tattgatgtt ggacgagtcg gaatcgcaga ccgataccag gatcttgcca tcctatggaa
     5461 ctgcctcggt gaattttctc cttcattaca gaaacggctt tttcaaaaat atggtattga
     5521 taatcctgat atgaataaat tgcagtttca tttgatgctc gatgagtttt tctgatagtt
     5581 agtctttgta gagacacaaa cctgaaattc cggacaccgc gcttcaggac atctccctgg
     5641 acgccgatat ctggcagtat ccggacggta ctatcgaacg ccgggccaac ggtactcccc
     5701 tgccctttat gactgacgac cggctatttc acccacgcac ttctccatga aatttagcat
     5761 cgtcgcggtt aatgtcgaaa atttgccacc tgacgtggtt ggcatcgagg gtgaaaactg
     5821 ccgtggcgag ggtgttctcc tcatccggat cgtcggcagc cagccggtaa attggcagtt
     5881 ctgcgtcatg ggtatctgag agaatggttt ttgccgccgc ggcgtcaaac ggaggttgcg
     5941 tttcccgcca ctgcacgagg cgtaactgcc gcgacgctga actgtcggta acgatctgct
     6001 caacgccagc cagtgccgca tgcaccagat ggttggcatg cccggttacc gtcgtcaggg
     6061 gtagaacgga acagccttga ccggtggcct caacgctgaa cagccgcgca tcgcccagct
     6121 gcccgagcgt atggtgaaac gccccggatc gcggctggcc ggtaagtata gtgatggcct
     6181 cgtcgagggt gttcgcattc agcgaggcgc gagccaggat ctgacgcggt aatccctgcg
     6241 gacgatacac tgcacggatg ttattcaccg tgttaacgat acctttttca tttaccgcaa
     6301 aggtgtggcc gcaaatcgac cccttgggtg gcagtccgaa cagcgcccga tcatggtcgc
     6361 gctctaggta gctatccaac ccatcgagca ggcgctgttc tggccactcg ccgctttcaa
     6421 ccttgccgag tatccacgcg cctaccagca ccttgcgccg ggtgtcctcc ttggcgtata
     6481 acgagcaagt tttggcttac caaaccttaa aatccacaca atcacagaca caggaaaaat
     6541 cagatgaacg agcaaaacaa ctcttgggtt caagagtggt tgaacaagtc agcgaaagcg
     6601 agcgagagaa tggcaacgga cgagaaattt cgtcaggaag tcgccaaacg agcaacgaac
     6661 agcggacagg atattcaggc aattctagcc aagaatatcg ccaaatatca aaatcaggcg
     6721 aaagattaac taataaaacg tctgaaaacg ctctcataga gcctacaaga cctatcaaaa
     6781 ataaaaatgg tagtaaggta gcacccacac caacaaacac gcctaaaacg caaaataacg
     6841 caaattctaa tctattgtca tcagaacagt atcggcagac tatggagttt ttgcgagaat
     6901 ttaacgaccg attggagcaa atcgcccaaa atatcctaga aaatcagcta aaagcattga
     6961 gaactaaggc taaaccatct cattgccaat ggtattgaat tacttgatgt agaaggtgcg
     7021 attgtttcgg gtacagctac tggcgactgg actctatctt gtgtacgagg cgatgtaaaa
     7081 agtatgacct ttgtgttcaa tgatgggcgt attgtcagca cgactaacaa agggaatagt
     7141 gagaatatcg gttggttatc tgatagttca ggcattcctt gtgttcccgg ggagagaaaa
     7201 acaaatgcac cagaatattt aggcacaaat ttcttcttag cggctgccag tgccgcagcc
     7261 caagggtttt cacaatcaca aacaacgaca gtagttgatg gcaatagtgt tgttggagct
     7321 gttaccggtg atcaaggtaa gttcatctta gggcaagcca tcggcggtgg tttaaaagaa
     7381 tccgccgact ggtttagaaa gcgttttgct gaaaactttg atgctgtcta tgtaccacct
     7441 ggacatcgtg tcgctattca tatcgagaaa gagattgaga tcgattacaa ctccaaagga
     7501 cgtaaagtga aatacggaaa cacatcaact aatacacaac ttgattaaaa ggaacaaaca
     7561 atgaaagctt tatattgcat aatgatgagt gccttattga taacaggttg cacaacttca
     7621 actgaagaat tattacccgc taacggcagt acgatgcgag atatttggga taaaggagca
     7681 ggtaataacg atctacactt ataccgttca caacaaggac gaacactcga tcctgtcgat
     7741 tatattccta acactgagca acgagcctat acccgtacgg cagaaaatga aatt
//
LOCUS       DANMCL010000228         5302 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.124, whole genome shotgun sequence.
ACCESSION   DANMCL010000228 DANMCL010000000
VERSION     DANMCL010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 5302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5302
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.124"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            complement(114..1520)
                     /locus_tag="PXF40_002793"
     CDS             complement(114..1520)
                     /locus_tag="PXF40_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012478624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HDL5804053.1"
                     /translation="MIVKFFKKHGKGKASSCKACVDYLLNKPDDTAQILQGDPRLSQS
                     IADSLDFNNTYTAGCLSFEESDLPEIQKREIMARFEKAMFAGLEPEQYNIAWVQHTDK
                     GRLELNFVIPNVEMTSGKRLQPYYDRADRPLAENFKQVINHEYSLSDPNNPIKQKNLI
                     DRKDLPTDKKQALQAITDGLTALANAGQINDRQDVINALERAGFEIARITPKNLSIKT
                     DGQNLRLKGAFYEQDFRFSTDLSADITERAREYKRDSAERYQTARAKLDTAVTARREQ
                     FSRKYPNRAGEIDKKYRENVSLADPNRLDDISLDSHNRRRFDVAGEERLSRDDRMAKF
                     SRDSQRAEWGDQAINLQNGERDKALCSSGQGFYQLNVGREPESNRNPRNQETGEKING
                     DRTRTTLRENLENLARTARNRASEIIERIRELASRKRLDHSTVQRNQRAINDITEFNK
                     QLETVISQRKRQSRGMSR"
     gene            complement(1517..1822)
                     /locus_tag="PXF40_002794"
     CDS             complement(1517..1822)
                     /locus_tag="PXF40_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HDL5804054.1"
                     /translation="MKREKEIKIRLTENEYQALLERKTKARLAEWVREVALEQQPKRQ
                     PKVIDPALLFELNRIGVNLNQIARQCNSQKPSIDLVSVLATLREIEKNLKKLRELSL"
     gene            3016..3153
                     /locus_tag="PXF40_002795"
     CDS             3016..3153
                     /locus_tag="PXF40_002795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HDL5804055.1"
                     /translation="MKPLRIGARVIYPLQDLDKQIAYLEANLLENIKVHFIVESIEIK
                     G"
     gene            3288..4205
                     /locus_tag="PXF40_002796"
     CDS             3288..4205
                     /locus_tag="PXF40_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005618523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cephalosporin-hydrolyzing class A beta-lactamase
                     ROB-1"
                     /protein_id="HDL5804056.1"
                     /translation="MLNKLKIGTLLLLTLTACSPNSVHSVTSNPQPASAPVQQSATQA
                     TFQQTLANLEQQYQARIGVYVWDTETGHSLSYRADERFAYASTFKALLAGAVLQSLPE
                     KDLNRTISYSQKDLVSYSPETQKYVGKGMTIAQLCEAAVRFSDNSATNLLLKELGGVE
                     QYQRILRQLGDNVTHTNRLEPDLNQAKPNDIRDTSTPKQMAMNLNAYLLGNTLTESQK
                     TILWNWLDNNATGNPLIRAATPTSWKVYDKSGAGKYGVRNDIAVVRIPNRKPIVMAIM
                     STQFTEEAKFNNKLVEDAAKQVFHTLQLN"
     gene            4209..5132
                     /locus_tag="PXF40_002797"
     CDS             4209..5132
                     /locus_tag="PXF40_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014937123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HDL5804057.1"
                     /translation="MQHEKKLLWILILGLIIISCKQRKTEMKEKIIKTNGIELCTESF
                     GNKKNPAILLVAGATVSMLYWDTEFCQQLSEKGFFVIRYDNRDVGKSTNYEPGSTPYD
                     IVDLTNDAISILDGYKIDKAHFVGISLGGLISQIASIKFADRVNSLTLMSSGPWGDSD
                     PTIPEMDTSILDFHSKAGTVNWTNEDSVVNYLIQGAELMSGKKQFDKQRSEKLIRAEF
                     NRANNYISMFNHAALQGGGEEYWNRLNEIKQPTLIIHGTDDKIWHYKNAGFLLEKIKG
                     SNLITLEGTGHELHVDDWKSIIDGIEKHIND"
BASE COUNT         1496 a         1068 c         1093 g         1645 t
ORIGIN      
        1 ttccaaatga tgagtacttc ctaccgacat cttacaataa gccgagtgtt tgagaaatac
       61 catttattaa actgtctttt tccataagtg ttgccataat tctccccctt gttttatctg
      121 ctcatacccc tgctttgtct tttgcgttga gatattaccg tttcaagctg tttattaaac
      181 tctgtaatgt cgttaattgc tcgctgattt cgttgtactg ttgaatgatc aaggcgtttt
      241 cggctcgcaa gctctctaat tctttcgata atttcactcg ctctgtttct tgctgttcta
      301 gcaaggtttt caaggttttc tcgtaaagta gttctagttc ggtcgccatt tattttttcc
      361 cctgtttctt ggtttcttgg atttcgatta ctttcaggtt ctcgccccac gttgagttga
      421 taaaatcctt gtccactgct acacaaggct ttatcccttt ctccgttttg caagttgata
      481 gcttgatccc cccactctgc tctttggcta tctcggctga attttgccat tcggtcatct
      541 cttgataggc gttcttcgcc tgccacgtca aaacgcctgc ggttatggct atcaaggcta
      601 atatcgtcaa ggcgattagg gtcggcaagc gatacattct cacggtattt tttatcaatt
      661 tcgcctgctc gatttggata ttttcggcta aattgttccc tgcgtgctgt aactgctgta
      721 tcaagttttg ctcgtgccgt ttgatagcgt tctgcactat ctcgcttgta ctctctagct
      781 ctttctgtga tgtctgctga aaggtctgtg ctaaatctaa aatcttgctc atagaaagcc
      841 ccttttaatc ttaaattctg tccgtcagtc ttgattgata ggttttttgg cgtaatgcgt
      901 gcaatttcaa aacctgcacg ttctagggca tttataacgt cctgtcggtc gtttatctgc
      961 cctgcgttcg ctaaagctgt taaaccgtcc gtaatcgcct gtaaagcctg ttttttatcg
     1021 gttggtaggt ctttgcggtc aatcaggttt ttttgcttta tagggttgtt tgggtcgctt
     1081 aggctgtatt cgtggttgat tacctgcttg aagttttcag caagtgggcg gtctgccctg
     1141 tcgtagtagg gttgtaggcg ttttccgctt gtcatctcta cgtttgggat aacgaaattc
     1201 agctcaagcc tgcctttgtc ggtgtgttgt acccacgcaa tgttatattg ttcaggctca
     1261 agccctgcaa acattgcctt ttcaaagcgt gccataatct cacgcttttg tatttcgggt
     1321 aggtcgcttt cttcaaaaga caagcaacct gcggtgtaag tgttattaaa atcaagacta
     1381 tcagcaatac tttgtgatag tcggggatcg ccctgcagga tttgggcggt gtcgtcaggc
     1441 ttatttagta aatagtccac acaagccttg caactactag cttttccctt accgtgtttc
     1501 ttaaaaaatt taacgatcat aggctcaatt ctcgcaattt tttgagattt ttttcaattt
     1561 ctcgcaaggt cgccaacacg ctaacaaggt caatgctcgg cttttgactg ttgcattgtc
     1621 gggcgatttg gttcaggttt acgcctatgc ggttcagctc gaacagtaac gcagggtcga
     1681 ttactttcgg ctgtcgctta ggttgctgtt ctagggcaac ttcccgaacc cactccgcaa
     1741 gccttgcttt cgtttttctc tctaacaagg cttgatactc gttttcggtg agcctgattt
     1801 ttatctcttt ctcacgtttc ataatggtgt ccgttcttct attttgaccg ctgaaagcgg
     1861 tcgggggtca agggggcaaa gcccttttgc aaggtcaaaa aggaaactcg aagagtaccc
     1921 tttttgtgtc cttgctatta aaaaagacaa tagtacacca aaagccccga gagtgatata
     1981 taaaaatcag cggagccgat aggcgacttc gttttattag gcgaacatcg tgagcctttg
     2041 aaccaatata aaaataaaaa aatttattat tagggaagtg gttattgtgg gcggtaggtt
     2101 tttagtgttg gaaagctgtt ggaaagctcg tgggtaactc gcagagttat ccatcagctt
     2161 ttcaatggct tttcaatacg acccgcaggg gaaaaaccgt taaaccgtcc acattaaccg
     2221 ctgacccaaa aagaacgctt tttactaaaa gatttctatt cggttctcaa atgttgcgtg
     2281 aatggggcaa caataaaacg ttgtggcgtt tatcagggtg ggaattgcag acttaaacaa
     2341 tcaattccgc tgtatcctta aatctcgctt atcaggtgtg cttgtatttc ttggggcttt
     2401 cgcctttcta accgtagcac gaaacggaga cagagcttaa ttttcgtatt aagaacgtta
     2461 tcacttctac gcctgtttat tcttccgaag tccgagctga agaccgtcta atttaaggtt
     2521 tacgtttctt gtttacgtcg ttgaatggtt ttttggtagt agggacgctt cgcaatctct
     2581 tgcattacta gctacccttt gctatgatta gattgttcac gtctggatca tagcaaagaa
     2641 cgtactgata cagattatag gaaaagggat cgaatgtcaa aagttcgatc cctttttctt
     2701 ttctaaagca ttggtattaa aggctttaag gtgtatttta ttaaaatctg tacacctttg
     2761 tgaaaatcca tacacctttc ttaccgtgta attttatgaa aattcgtgca cctttctgct
     2821 aacgccctgc ggttgttaga ctaaaaaagc cattgaaagc aagtttcaac ggctttttca
     2881 gtcccgaata aaacaaaacc gccttgttag gcggttatgt gttaaaatca ctttcgcact
     2941 atggcggcgg ctcgcactac cgttcatagt gtgagcctag tcgcttagcc ttatagtgct
     3001 aagggggtga tttatgtgaa acctctacga attggggcaa gggttattta tccgcttcaa
     3061 gacttagaca agcaaattgc atacctagag gcgaacttac ttgagaatat caaagtgcat
     3121 ttcattgtag aaagcattga gattaaaggc taaattgcta gacttttgcg cttaaattcg
     3181 ccaaaatctg tttttttgtt ctacaaacaa attatccgaa tttccgcgca atgtacgttt
     3241 caggctgcct gaaaagaaat ttatttagta aaatcaaagg ataatttatg ttaaataagt
     3301 taaaaatcgg cacattatta ttgctgacat taacggcttg ttcgcccaat tctgttcatt
     3361 cggtaacgtc taatccgcag cctgctagtg cgcctgtgca acaatcagcc acacaagcca
     3421 cctttcaaca gactttggcg aatttggaac agcagtatca agcccgaatt ggcgtttatg
     3481 tatgggatac agaaacggga cattctttgt cttatcgtgc agatgaacgc tttgcttatg
     3541 cgtccacttt caaggcgttg ttggctgggg cggtgttgca atcgctgcct gaaaaagatt
     3601 taaatcgtac catttcatat agccaaaaag atttggttag ttattctccc gaaacccaaa
     3661 aatacgttgg caaaggcatg acgattgccc aattatgtga agcagccgtg cggtttagcg
     3721 acaacagcgc gaccaatttg ctgctcaaag aattgggtgg cgtggaacaa tatcaacgta
     3781 ttttgcgaca attaggcgat aacgtaaccc ataccaatcg gctagaaccc gatttaaatc
     3841 aagccaaacc caacgatatt cgtgatacga gtacacccaa acaaatggcg atgaatttaa
     3901 atgcgtattt attgggcaac acattaaccg aatcgcaaaa aacgattttg tggaattggt
     3961 tggacaataa cgcaacaggc aatccattga ttcgcgctgc tacgccaaca tcgtggaaag
     4021 tgtacgataa aagcggggcg ggtaaatatg gtgtacgcaa tgatattgcg gtggttcgca
     4081 taccaaatcg caaaccgatt gtgatggcaa tcatgagtac gcaatttacc gaagaagcca
     4141 aattcaacaa taaattagta gaagatgcag caaagcaagt atttcatact ttacagctca
     4201 actaacaaat tcagcatgaa aaaaaactac tttggatatt aattttagga ctgataataa
     4261 tcagttgcaa acaaaggaaa acagaaatga aagagaaaat aattaaaaca aacggcattg
     4321 aactctgtac ggaaagtttt ggaaataaga aaaatccagc aatccttttg gtagcaggtg
     4381 caaccgtatc aatgctgtat tgggacactg aattttgcca acaattatct gaaaaaggat
     4441 tttttgttat tcgttacgac aacagagatg taggaaaatc cactaattat gaaccaggtt
     4501 ctactccata cgatattgtt gacttaacta atgacgctat ttcaatattg gatggctaca
     4561 agattgacaa agcacatttt gtggggattt ctttgggcgg actaatttct caaatagcat
     4621 caataaagtt tgccgacaga gttaactcct taactcttat gtcatcaggc ccttggggag
     4681 actcagaccc aactatacct gaaatggaca cgagtatttt agatttccat agtaaagcag
     4741 gtacagtcaa ttggacaaat gaagacagtg tggtaaacta tttaattcag ggtgcagaat
     4801 taatgagtgg caagaaacaa tttgacaaac aaagaagtga aaaactgata agagctgagt
     4861 tcaatagagc caacaattat ataagtatgt tcaatcacgc tgcattgcaa ggtggtggtg
     4921 aagaatattg gaacagatta aacgaaatca aacaacccac cttaattatc cacggaacag
     4981 acgacaaaat ttggcattat aagaatgcag gttttttact agaaaaaata aaaggttcaa
     5041 atctaatcac ccttgaaggt acaggacacg aattacacgt tgatgattgg aaatcaataa
     5101 ttgatggaat agaaaaacac ataaatgact gataaacaaa aacaacgacc cgctaacaat
     5161 gtatataaaa aataggcgaa acagtagtaa attcaaggct tttggctcgt attatacttt
     5221 gtgcttaacc gaaaatttgg cacttcgaaa tcgcctactt ttcgctgaat ttacaatcca
     5281 agtgcaacaa aaaaagaagt ac
//
LOCUS       DANMCL010000229         3932 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.141, whole genome shotgun sequence.
ACCESSION   DANMCL010000229 DANMCL010000000
VERSION     DANMCL010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3932
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.141"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            274..720
                     /locus_tag="PXF40_002798"
                     /pseudo
     CDS             274..720
                     /locus_tag="PXF40_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001747810.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3363 domain-containing protein"
     gene            997..2211
                     /gene="floR"
                     /locus_tag="PXF40_002799"
     CDS             997..2211
                     /gene="floR"
                     /locus_tag="PXF40_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000214125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloramphenicol/florfenicol efflux MFS
                     transporter FloR"
                     /protein_id="HDL5804058.1"
                     /translation="MTTTRPAWAYTLPAALLLMAPFDILASLAMDIYLPVVPAMPGIL
                     NTTPAMIQLTLSLYMVMLGVGQVIFGPLSDRIGRRPILLAGATAFVIASLGAAWSSTA
                     PAFVAFRLLQAVGASAMLVATFATVRDVYANRPEGVVIYGLFSSVLAFVPALGPIAGA
                     LIGEFLGWQAIFITLAILAMLALLNAGFRWHETRPLDQVKTRRSVLPIFASPAFWVYT
                     VGFSAGMGTFFVFFSTAPRVLIGQAEYSEIGFSFAFATVALVMIVTTRFAKSFVARWG
                     IAGCVARGMALLVCGAVLLGIGELYGSPSFLTFILPMWVVAVGIVFTVSVTANGALAE
                     FDDIAGSAVAFYFCVQSLIVSIVGTLAVALLNSDTAWPVICYATAMAVLVSLGLVLLR
                     LRGAATEKSPVV"
     gene            2239..2544
                     /locus_tag="PXF40_002800"
     CDS             2239..2544
                     /locus_tag="PXF40_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HDL5804059.1"
                     /translation="MRRTNHRNLVNVGILSGRIPLISLVQFIAVAEHLNFRHAAKALG
                     ISQSSVSARVKALEDNLGVLLFERHARGVRLTDAGRHFMERVTAGVDQLDHAVKTAE"
     gene            2656..>3932
                     /locus_tag="PXF40_002801"
     CDS             2656..>3932
                     /locus_tag="PXF40_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001120888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91-like element ISVsa3 family transposase"
                     /protein_id="HDL5804060.1"
                     /translation="MPHVAARTASRDRDTGRYQSHRPEQTLLYQIVDEYYPAFAALMA
                     EQGKELPGYVQREFEEFLQCGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARR
                     MAESAALLVDEVLPEQPMRQWVLSFPFQLRFLFASRPEIMGWVLGIVYRVIATHLVKK
                     AGHTHQVAKTGAVTLIQRFGSALNLNVHFHMLFLDGVYVEQSHGSARFRWVKAPTSPE
                     LTQLTHTIAHRVGRYLERQGLLERDVENSYLASDAVDDDPMTPLLGHSITYRIAVGSQ
                     AGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGVAARADERKKLERLCRYISRPAVSE
                     KRLSLTRGGNVRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPN
                     SRHRALVTPAKRGRGNKVRVADEPATPAQRRAS"
BASE COUNT          735 a         1144 c         1210 g          843 t
ORIGIN      
        1 ttggacttgg gtgaaaaggg cgtttattct tcctatacgt gccgcgttcc aggcggcgac
       61 tatgagggct atgtcgatgc ccatgtgcgc cggctggagg cgctacgccg ggccggtatc
      121 gtcgagcgga tcgacgccga ccaatggcgc atccccgatg atctggtcag ccgtgccgcc
      181 gcccatgacg ccggccgaga cagtcaggcc agcgttcgcg tcctttcccc ggtcgatctg
      241 aacaaacaga tcggatcgga cggcgcgacc tggctggacc ggcggctgat ccacggcgag
      301 acggccgacc ttgcgccaac cggcttcggg caacaagtcc gcgaagccat ggaccagcgc
      361 cgcgagcacc atatcgaaca gggcgacgcc acccgcagcc gggacagccg cgtcttctac
      421 cggcgcaacc ttctcgccat cctgcgggag cgcgaggtag ccggcgtcgg atcggatatg
      481 gctttgagta agggcctgcc gttccgcgcc gccacggacg gcgagagcgt cagcggcaag
      541 tttaccggaa ccgtgcatct atcgagcggc aagttcgccg tggtcgagaa atcccatgag
      601 ttcacccttg tcccgtggcg gccgatcatc gaccgccaac tcggccgcga ggttatgggc
      661 atcgtgcagg gcgggtcggt gtcgtggcag ttagggcggc agagggggct ggaacgctga
      721 gtgcgcccat gccgcattgc gaagcaaaag ataatcggat aaaatgtagc aattcatatt
      781 cgtaagcgtg gagtaatcag atgggaaatt ccaagtcagc agacaagtaa gccgcaacaa
      841 ccagtattgt tgttgcggcg ctctgtaagg ctagtctcat ctgattgctg acgagcagac
      901 gtcgcccggt attccttaat cgagggttga ttcgtcatga ccaccacacg ccccgcgtgg
      961 gcctaaacaa atatcaatcg caaggagatc atattcatga ccaccacacg ccccgcgtgg
     1021 gcctatacgc tgccggcagc actgctgctg atggctcctt tcgacatcct cgcttcactg
     1081 gcgatggata tttatctccc tgtcgttcca gcgatgcccg gcatcctgaa cacgacgccc
     1141 gctatgatcc aactcacgtt gagcctctat atggtgatgc tcggcgtggg ccaggtgatt
     1201 tttggtccgc tctcagacag aatcgggcga cggccaattc tacttgcggg cgcaacggct
     1261 ttcgtcattg cgtctctggg agcagcttgg tcttcaactg caccggcctt tgtcgctttc
     1321 cgtctacttc aagcagtggg cgcgtcggcc atgctggtgg cgacgttcgc gacggttcgc
     1381 gacgtttatg ccaaccgtcc tgagggtgtc gtcatctacg gccttttcag ttcggtgctg
     1441 gcgttcgtgc ctgcgctcgg ccctatcgcc ggagcattga tcggcgagtt cttgggatgg
     1501 caggcgatat tcattacttt ggctatactg gcgatgctcg cactcctaaa tgcgggtttc
     1561 aggtggcacg aaacccgccc tctggatcaa gtcaagacgc gccgatctgt cttgccgatc
     1621 ttcgcgagtc cggctttttg ggtttacact gtcggcttta gcgccggtat gggcaccttc
     1681 ttcgtcttct tctcgacggc tccccgtgtg ctcataggcc aagcggaata ttccgagatc
     1741 ggattcagct ttgccttcgc cactgtcgcg cttgtaatga tcgtgacaac ccgtttcgcg
     1801 aagtcctttg tcgccagatg gggcatcgca ggatgcgtgg cgcgtgggat ggcgttgctt
     1861 gtttgcggag cggtcctgtt ggggatcggc gaactttacg gctcgccgtc attcctcacc
     1921 ttcatcctac cgatgtgggt tgtcgcggtc ggtattgtct tcacggtgtc cgttaccgcg
     1981 aacggcgctt tggcagagtt cgacgacatc gcgggatcag cggtcgcgtt ctacttctgc
     2041 gttcaaagcc tgatagtcag cattgtcggg acattggcgg tggcactttt aaacagtgac
     2101 acagcgtggc ccgtgatctg ttacgccacg gcgatggcgg tactggtttc gttggggctg
     2161 gtgctccttc ggctccgtgg ggctgccacc gagaagtcgc cagtcgtcta accgacgact
     2221 ggtagcaggc ccgctccgat gcggcgcact aaccatcgaa acctcgtgaa tgtcggtatc
     2281 ctgtctggca ggataccgct catttccctt gttcagttca tcgccgtcgc cgagcatctg
     2341 aattttcggc atgcggccaa ggcacttggt atcagccagt cgagcgtcag cgcgcgtgtg
     2401 aaagcgctgg aggataacct tggtgtcctg ctatttgagc gccatgcgcg gggcgttcgg
     2461 ctaacagacg caggcaggca cttcatggag cgtgtcacgg cgggtgtcga tcaactcgat
     2521 cacgcagtga agaccgcgga gtgacgggca ctggctggca atgtctagca acggcaggca
     2581 tttcggctga gggtaaaaga actttccgct aagcgataga ctgtatgtaa acacagtatt
     2641 gcaaggacgc ggaacatgcc tcatgtggcg gccaggacgg ccagccggga tcgggatact
     2701 ggtcgttacc agagccaccg acccgagcaa acccttctct atcagatcgt tgacgagtat
     2761 tacccggcat tcgctgcgct tatggcagag cagggaaagg aattgccggg ctatgtgcaa
     2821 cgggaatttg aagaatttct ccaatgcggg cggctggagc atggctttct acgggttcgc
     2881 tgcgagtctt gccacgccga gcacctggtc gctttcagct gtaagcgtcg cggtttctgc
     2941 ccgagctgtg gggcgcggcg gatggccgaa agtgccgcct tgctggttga tgaagtactg
     3001 cctgaacaac ccatgcgtca gtgggtgttg agcttcccgt ttcagctgcg tttcctgttt
     3061 gccagccggc ccgagatcat ggggtgggtg ctgggcatcg tttaccgcgt cattgccacg
     3121 cacctggtca agaaagcggg ccatacccac caagtggcca agacgggcgc ggtcaccctg
     3181 atccagcgtt ttggatcggc gctcaatctg aatgttcact tccacatgct gtttctcgac
     3241 ggtgtgtatg tcgagcaatc ccacggctca gcgcgtttcc gctgggtcaa ggcgccgacc
     3301 agcccagagc tcacccagct gacgcacacc atcgcccacc gggtgggtcg ctatctggaa
     3361 cggcaaggcc tgctggaacg ggatgtcgaa aacagctatc tggcctcgga tgcggtggat
     3421 gacgacccga tgacacccct gctggggcac tcgatcactt accgtatcgc tgtcggttca
     3481 caggcggggc gaaaggtgtt cactttgcaa actctgccga ccagtggtga tccgttcggt
     3541 gacgggattg gcaaggtagc cgggtccagc ctgcacgccg gcgtggcggc cagggccgat
     3601 gaacgcaaga agctcgaacg gctgtgccgg tacatcagcc gcccggcggt atccgagaag
     3661 cggctgtcgt taacacgagg cggcaacgtg cgctaccagc tcaagacgcc gtaccgggac
     3721 ggcaccacgc acgtcatttt cgaaccattg gatttcattg caaggctggc cgccctggta
     3781 ccgaagccca gagtcaacct aacccgcttc cacggggtgt tcgcacccaa cagtcggcac
     3841 cgggcgttgg tcacgccggc aaaacggggc aggggcaaca aggtcagggt ggctgatgaa
     3901 ccggcaacac cagcacaacg gcgagcgtcg at
//
LOCUS       DANMCL010000230         3292 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.150, whole genome shotgun sequence.
ACCESSION   DANMCL010000230 DANMCL010000000
VERSION     DANMCL010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.150"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            94..627
                     /gene="aadB"
                     /locus_tag="PXF40_002802"
     CDS             94..627
                     /gene="aadB"
                     /locus_tag="PXF40_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000381802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside nucleotidyltransferase
                     ANT(2'')-Ia"
                     /protein_id="HDL5804061.1"
                     /translation="MDTTQVTLIHKILAAADERNLPLWIGGGWAIDARLGRVTRKHDD
                     IDLTFPGERRGELEAIVEMLGGRVMEELDYGFLAEIGDELLDCEPAWWADEAYEIAEA
                     PQGSCPEAAEGVIAGRPVRCNSWEAIIWDYFYYADEVPPVDWPTKHIESYRLACTSLG
                     AEKVEVLRAAFRSRYAA"
     gene            685..1476
                     /locus_tag="PXF40_002803"
     CDS             685..1476
                     /locus_tag="PXF40_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA25"
                     /protein_id="HDL5804062.1"
                     /translation="MREAVTIEISNQLSEVLSVIERHLESTLLAVHLYGSAVDGGLKP
                     YSDIDLLVTVAVKLDETTRRALLNDLMEASAFPGESETLRAIEVTLVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPAMIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAITGKIAPKDVAADWAIKRLPA
                     QYQPVLLEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            1553..2380
                     /locus_tag="PXF40_002804"
     CDS             1553..2380
                     /locus_tag="PXF40_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_034033256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxacillin-hydrolyzing class D beta-lactamase
                     OXA-2"
                     /protein_id="HDL5804063.1"
                     /translation="MAIRIFAILFSIFSLATFAHAQEGTLERSDWRKFFSEFQAKGTI
                     VVADERQADRAMLVFDPVRSKKRYSPASTFKIPHTLFALDAGAVRDEFQIFRWDGVNR
                     GFAGHNQDQDLRSAMRNSTVWVYELFAKEIGDDKARRYLKKIDYGNADPSTSNGDYWI
                     EGSLAISAQEQIAFLRKLYRNELPFRVEHQRLVKDLMIVEAGRNWILRAKTGWEGRMG
                     WWVGWVEWPTGSVFFALNIDTPNRMDDLFKREAIVRAILRSIEALPPNPAVNSDAAR"
     gene            2471..3175
                     /locus_tag="PXF40_002805"
     CDS             2471..3175
                     /locus_tag="PXF40_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005221000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS6-like element IS26 family transposase"
                     /protein_id="HDL5804064.1"
                     /translation="MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDH
                     STIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTV
                     DFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDV
                     EHRQIKYRNNVIECDHGKLKRIINATLGFKSMKTAYATIKGIEVMRALRKGQASAFYY
                     GDPLGEMRLVSRVFEM"
BASE COUNT          803 a          805 c          921 g          763 t
ORIGIN      
        1 aataaatcaa ttattattat actgctgatc accgtattag cagcaacgat gttacgcagc
       61 agggcagtcg ccctaaaaca aaggttaggc cgcatggaca caacgcaggt cacattgata
      121 cacaaaattc tagctgcggc agatgagcga aatctgccgc tctggatcgg tgggggctgg
      181 gcgatcgatg cacggctagg gcgtgtaaca cgcaagcacg atgatattga tctgacgttt
      241 cccggcgaga ggcgcggcga gctcgaggca atagttgaaa tgctcggcgg gcgcgtcatg
      301 gaggagttgg actatggatt cttagcggag atcggggatg agttacttga ctgcgaacct
      361 gcttggtggg cagacgaagc gtatgaaatc gcggaggctc cgcagggctc gtgcccagag
      421 gcggctgagg gcgtcatcgc cgggcggcca gtccgttgta acagctggga ggcgatcatc
      481 tgggattact tttactatgc cgatgaagta ccaccagtgg actggcctac aaagcacata
      541 gagtcctaca ggctcgcatg cacctcactc ggggcggaaa aggttgaggt cttgcgtgcc
      601 gctttcaggt cgcgatatgc ggcctaacaa ttcgtccaag ccgacgccgc ttcgcggcgc
      661 ggcttaactc aggtgttaga catcatgagg gaagcggtga ccatcgaaat ttcgaaccaa
      721 ctatcagagg tgctaagcgt cattgagcgc catctggaat caacgttgct ggccgtgcat
      781 ttgtacggct ccgcagtgga tggcggcctg aagccataca gcgatattga tttgttggtt
      841 actgtggccg taaagcttga tgaaacgacg cggcgagcat tgctcaatga tcttatggag
      901 gcttcggctt tccctggcga gagcgagacg ctccgcgcta tagaagtcac ccttgtcgtg
      961 catgacgaca tcatcccgtg gcgttatccg gctaagcgcg agctgcaatt tggagaatgg
     1021 cagcgcaatg acattcttgc gggtatcttc gagccagcca tgatcgacat tgatctggct
     1081 atcttgctga caaaagcaag agaacatagc gttgccttgg taggtccagc ggcggaggaa
     1141 ctctttgatc cggttcctga acaggatcta tttgaggcgc taaatgaaac cttaacgcta
     1201 tggaactcgc cgcccgactg ggctggcgat gagcgaaatg tagtgcttac gttgtcccgc
     1261 atttggtaca gcgcaataac cggcaaaatc gcgccgaagg atgtcgctgc cgactgggca
     1321 ataaaacgcc tacctgccca gtatcagccc gtcttacttg aagctagaca ggcttatctt
     1381 ggacaagaag aagatcgctt ggcctcgcgc gcagatcagt tggaagaatt tgttcactac
     1441 gtgaaaggcg agatcaccaa ggtagtcggc aaataatgtc taacaattcg ttcaagccga
     1501 cgccgcttcg cggcgcggct taccttggcc gttgggcatt aaggaaaagt taatggcaat
     1561 ccgaatcttc gcgatacttt tctccatttt ttctcttgcc actttcgcgc atgcgcaaga
     1621 aggcacgcta gaacgttctg actggaggaa gtttttcagc gaatttcaag ccaaaggcac
     1681 gatagttgtg gcagacgaac gccaagcgga tcgtgccatg ttggtttttg atcctgtgcg
     1741 atcgaagaaa cgctactcgc ctgcatcgac attcaagata cctcatacac tttttgcact
     1801 tgatgcaggc gctgttcgtg atgagttcca gatttttcga tgggacggcg ttaacagggg
     1861 ctttgcaggc cacaatcaag accaagattt gcgatcagca atgcggaatt ctactgtttg
     1921 ggtgtatgag ctatttgcaa aggaaattgg tgatgacaaa gctcggcgct atttgaagaa
     1981 aatcgactat ggcaacgccg atccttcgac aagtaatggc gattactgga tagaaggcag
     2041 ccttgcaatc tcggcgcagg agcaaattgc atttctcagg aagctctatc gtaacgagct
     2101 gccctttcgg gtagaacatc agcgcttggt caaggatctc atgattgtgg aagccggtcg
     2161 caactggata ctgcgtgcaa agacgggctg ggaaggccgt atgggttggt gggtaggatg
     2221 ggttgagtgg ccgactggct ccgtattctt cgcactgaat attgatacgc caaacagaat
     2281 ggatgatctt ttcaagaggg aggcaatcgt gcgggcaatc cttcgctcta ttgaagcgtt
     2341 accgcccaac ccggcagtca actcggacgc tgcgcgataa aaccgcgcag cgccggttac
     2401 ttcaacgggc actgttgcaa atagtcggtg gtgataaact tatcatcccc ttttgctgat
     2461 ggagctgcac atgaacccat tcaaaggccg gcattttcag cgtgacatca ttctgtgggc
     2521 cgtacgctgg tactgcaaat acggcatcag ttaccgtgag ctgcaggaga tgctggctga
     2581 acgcggagtg aatgtcgatc actccacgat ttaccgctgg gttcagcgtt atgcgcctga
     2641 aatggaaaaa cggctgcgct ggtactggcg taacccttcc gatctttgcc cgtggcacat
     2701 ggatgaaacc tacgtgaagg tcaatggccg ctgggcgtat ctgtaccggg ccgtcgacag
     2761 ccggggccgc actgtcgatt tttatctctc ctcccgtcgt aacagcaaag ctgcataccg
     2821 gtttctgggt aaaatcctca acaacgtgaa gaagtggcag atcccacgat tcatcaacac
     2881 ggataaagcg cccgcctatg gtcgcgcgct tgctctgctc aaacgcgaag gccggtgccc
     2941 gtctgacgtt gaacaccgac agattaagta ccggaacaac gtgattgaat gcgatcatgg
     3001 caaactgaaa cggataatca acgccacgct gggatttaaa tccatgaaga cggcttacgc
     3061 caccatcaaa ggtattgagg tgatgcgtgc actacgcaaa ggccaggcct cagcatttta
     3121 ttatggtgat cccctgggcg aaatgcgcct ggtaagcaga gtttttgaaa tgtaaggcct
     3181 ttgaataaga caaaaggctg cctcatcgct aactttgcaa cagtgccgtt aaagctcggt
     3241 caatcggcac tgattgagcc tgactcacca ctgcaattag gatctttgat gc
//
LOCUS       DANMCL010000231         1350 bp    DNA     linear   BCT 23-FEB-2023
DEFINITION  TPA_asm: Mannheimia haemolytica isolate Culture
            SAMN25596940-rid16723153.guided.183, whole genome shotgun sequence.
ACCESSION   DANMCL010000231 DANMCL010000000
VERSION     DANMCL010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN25596940
            Sequence Read Archive: SRR17858395
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Mannheimia haemolytica
  ORGANISM  Mannheimia haemolytica
            Bacteria; Pseudomonadota; Gammaproteobacteria; Pasteurellales;
            Pasteurellaceae; Mannheimia.
REFERENCE   1  (bases 1 to 1350)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1350)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 12-JAN-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001574453.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001574453.1
            Genome Coverage       :: 93x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/13/2023 00:31:32
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,806
            CDSs (total)                      :: 2,753
            Genes (coding)                    :: 2,677
            CDSs (with protein)               :: 2,677
            Genes (RNA)                       :: 53
            rRNAs                             :: 2, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 76
            CDSs (without protein)            :: 76
            Pseudo Genes (ambiguous residues) :: 0 of 76
            Pseudo Genes (frameshifted)       :: 36 of 76
            Pseudo Genes (incomplete)         :: 29 of 76
            Pseudo Genes (internal stop)      :: 12 of 76
            Pseudo Genes (multiple problems)  :: 1 of 76
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1350
                     /organism="Mannheimia haemolytica"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN25596940-rid16723153.guided.183"
                     /isolate="Culture"
                     /host="cow"
                     /db_xref="taxon:75985"
                     /country="USA: MI"
                     /collection_date="2019-10-01"
                     /collected_by="Michigan State University Diagnostic Center
                     for Population and Animal Health, Lansing, MI"
     gene            47..1249
                     /gene="tet(H)"
                     /locus_tag="PXF40_002806"
     CDS             47..1249
                     /gene="tet(H)"
                     /locus_tag="PXF40_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline efflux MFS transporter Tet(H)"
                     /protein_id="HDL5804065.1"
                     /translation="MNKSIIIILLITVLDAIGIGLIMPVLPTLLNEFVSENSLATHYG
                     VLLALYATMQVIFAPILGRLSDKYGRKPILLFSLLGAALDYLLMAFSTTLWMLYIGRI
                     IAGITGATGAVCASAMSDVTPAKNRTRYFGFLGGAFGVGLIIGPMLGGLLGDISAHMP
                     FIFAAISHSILLILSLLFFRETQKREALVANRTPENQTASNTVTVFFKKSLYFWLATY
                     FIIQLIGQIPATIWVLFTQYRFDWNTTSIGMSLAVLGVLNIFFQAIVAGKLAQKWGEK
                     TTIMISMSIDMMGCLLLAWIGHVWVILPALICLAAGGMGQPALQGYLSKSVDDNAQGK
                     LQGTLVSLTNITGIIGPLLFAFIYSYSVAYWDGLLWLMGAILYAMLLITAYFHQRKTT
                     PKAVISTP"
BASE COUNT          357 a          273 c          274 g          446 t
ORIGIN      
        1 agatatatta cacccactct atcactgata gatttttagg atctcaatga ataaatcaat
       61 tattattata ctgctgatca ccgtattaga tgccattggt atcgggctta tcatgccagt
      121 actccctact ctattaaatg aatttgtcag tgaaaattca ctggcaaccc attacggtgt
      181 gctattagcg ctctatgcta ccatgcaggt tatttttgct cctattctag gacgactgtc
      241 tgataaatac ggcagaaaac ccatcttgct gttttccctt ttaggcgcgg cactcgacta
      301 tcttttaatg gcattctcaa ccacactttg gatgctctat attgggcgca tcattgcggg
      361 gatcacaggc gcaacaggtg ccgtatgtgc atcagcgatg agtgatgtga ctcccgctaa
      421 aaatcgaact cgctattttg gtttcttagg tggtgctttt ggtgttggcc ttattatcgg
      481 cccaatgcta gggggattat taggtgatat cagtgctcat atgccattta tttttgccgc
      541 tatttcacac tcgatattat taatactctc tttgctcttt ttccgagaaa cacaaaaaag
      601 agaagcgctt gttgccaata ggacacctga aaaccaaact gcctcaaata cagtcactgt
      661 tttttttaag aaaagcctct acttttggtt agcaacctat tttattatcc agcttatcgg
      721 gcaaattcct gccaccatct gggtgctgtt tacacaatat cgttttgatt ggaacacaac
      781 ttctatcggt atgtctttgg cggttctggg tgtattaaat attttctttc aggcgattgt
      841 cgctgggaaa ttggcacaaa aatggggcga aaaaaccacc attatgatca gtatgtctat
      901 tgatatgatg ggctgtttat tattagcgtg gataggccac gtttgggtca tcttaccagc
      961 attaatttgc ttagcggcag gaggtatggg gcaacccgca ttacaaggtt atttatcaaa
     1021 atctgtcgat gataatgcgc aagggaaatt acaaggtact ctggtgagcc taaccaatat
     1081 taccgggatc attggtcccc ttttatttgc ctttatttat agttatagcg tcgcttattg
     1141 ggatggtctg ttatggctga tgggggcaat actttatgct atgttgctta ttaccgctta
     1201 ttttcaccaa agaaaaacca cacctaaagc tgttatttca accccttaat actagaaatt
     1261 ataaagatca taaaagtcct gtccgctctt aataacgttg ataggacttt atttgggtat
     1321 ccggattaca gggttgaaac agggctataa
//
